2-D Clinostat for Simulated Microgravity Experiments with Arabidopsis Seedlings

Science.gov (United States)

Wang, Hui; Li, Xugang; Krause, Lars; Görög, Mark; Schüler, Oliver; Hauslage, Jens; Hemmersbach, Ruth; Kircher, Stefan; Lasok, Hanna; Haser, Thomas; Rapp, Katja; Schmidt, Jürgen; Yu, Xin; Pasternak, Taras; Aubry-Hivet, Dorothée; Tietz, Olaf; Dovzhenko, Alexander; Palme, Klaus; Ditengou, Franck Anicet

2016-04-01

Ground-based simulators of microgravity such as fast rotating 2-D clinostats are valuable tools to study gravity related processes. We describe here a versatile g-value-adjustable 2-D clinostat that is suitable for plant analysis. To avoid seedling adaptation to 1 g after clinorotation, we designed chambers that allow rapid fixation. A detailed protocol for fixation, RNA isolation and the analysis of selected genes is described. Using this clinostat we show that mRNA levels of LONG HYPOCOTYL 5 (HY5), MIZU-KUSSEI 1 (MIZ1) and microRNA MIR163 are down-regulated in 5-day-old Arabidopsis thaliana roots after 3 min and 6 min of clinorotation using a maximal reduced g-force of 0.02 g, hence demonstrating that this 2-D clinostat enables the characterization of early transcriptomic events during root response to microgravity. We further show that this 2-D clinostat is able to compensate the action of gravitational force as both gravitropic-dependent statolith sedimentation and subsequent auxin redistribution (monitoring D R5 r e v :: G F P reporter) are abolished when plants are clinorotated. Our results demonstrate that 2-D clinostats equipped with interchangeable growth chambers and tunable rotation velocity are suitable for studying how plants perceive and respond to simulated microgravity.

Solar radio emissions: 2D full PIC simulations

Science.gov (United States)

Pierre, H.; Sgattoni, A.; Briand, C.; Amiranoff, F.; Riconda, C.

2016-12-01

Solar radio emissions are electromagnetic waves observed at the local plasma frequency and/or at twice the plasma frequency. To describe their origin a multi-stage model has been proposed by Ginzburg & Zhelezniakov (1958) and further developed by several authors, which consider a succession of non-linear three-wave interaction processes. Electron beams accelerated by solar flares travel in the interplanetary plasma and provide the free energy for the development of plasma instabilities. The model describes how part of the free energy of these beams can be transformed in a succession of plasma waves and eventually into electromagnetic waves. Following the work of Thurgood & Tsiklauri (2015) we performed several 2D Particle In Cell simulations. The simulations follow the entire set of processes from the electron beam propagation in the background plasma to the generation of the electromagnetic waves in particular the 2ωp emission, including the excitation of the low frequency waves. As suggested by Thurgood & Tsiklauri (2015) it is possible to identify regimes where the radiation emission can be directly linked to the electron beams. Our attention was devoted to estimate the conversion efficiency from electron kinetic energy to the em energy, and the growth rate of the several processes which can be identified. We studied the emission angles of the 2ωpradiation and compared them with the theoretical predictions of Willes et. al. (1995). We also show the role played by some numerical parameters i.e. the size and shape of the simulation box. This work is the first step to prepare laser-plasma experiments. V. L. Ginzburg, V. V. Zhelezniakov On the Possible Mechanisms of Sporadic Solar Radio Emission (Radiation in an Isotropic Plasma) Soviet Astronomy, Vol. 2, p.653 (1958) J. O. Thurgood and D. Tsiklauri Self-consistent particle-in-cell simulations of funda- mental and harmonic plasma radio emission mechanisms. Astronomy & Astrophysics 584, A83 (2015). A. Willes, P

Lattice simulation of 2d Gross-Neveu-type models

International Nuclear Information System (INIS)

Limmer, M.; Gattringer, C.; Hermann, V.

2006-01-01

Full text: We discuss a Monte Carlo simulation of 2d Gross-Neveu-type models on the lattice. The four-Fermi interaction is written as a Gaussian integral with an auxiliary field and the fermion determinant is included by reweighting. We present results for bulk quantities and correlators and compare them to a simulation using a fermion-loop representation. (author)

IRFK2D: a computer program for simulating intrinsic random functions of order k

Science.gov (United States)

Pardo-Igúzquiza, Eulogio; Dowd, Peter A.

2003-07-01

IRFK2D is an ANSI Fortran-77 program that generates realizations of an intrinsic function of order k (with k equal to 0, 1 or 2) with a permissible polynomial generalized covariance model. The realizations may be non-conditional or conditioned to the experimental data. The turning bands method is used to generate realizations in 2D and 3D from simulations of an intrinsic random function of order k along lines that span the 2D or 3D space. The program generates two output files, the first containing the simulated values and the second containing the theoretical generalized variogram for different directions together with the theoretical model. The experimental variogram is calculated from the simulated values while the theoretical variogram is the specified generalized covariance model. The generalized variogram is used to assess the quality of the simulation as measured by the extent to which the generalized covariance is reproduced by the simulation. The examples given in this paper indicate that IRFK2D is an efficient implementation of the methodology.

The simulation of 3D mass models in 2D digital mammography and breast tomosynthesis

Energy Technology Data Exchange (ETDEWEB)

Shaheen, Eman, E-mail: eman.shaheen@uzleuven.be; De Keyzer, Frederik; Bosmans, Hilde; Ongeval, Chantal Van [Department of Radiology, University Hospitals Leuven, Herestraat 49, 3000 Leuven (Belgium); Dance, David R.; Young, Kenneth C. [National Coordinating Centre for the Physics of Mammography, Royal Surrey County Hospital, Guildford GU2 7XX, United Kingdom and Department of Physics, Faculty of Engineering and Physical Sciences, University of Surrey, Guildford GU2 7XH (United Kingdom)

2014-08-15

Purpose: This work proposes a new method of building 3D breast mass models with different morphological shapes and describes the validation of the realism of their appearance after simulation into 2D digital mammograms and breast tomosynthesis images. Methods: Twenty-five contrast enhanced MRI breast lesions were collected and each mass was manually segmented in the three orthogonal views: sagittal, coronal, and transversal. The segmented models were combined, resampled to have isotropic voxel sizes, triangularly meshed, and scaled to different sizes. These masses were referred to as nonspiculated masses and were then used as nuclei onto which spicules were grown with an iterative branching algorithm forming a total of 30 spiculated masses. These 55 mass models were projected into 2D projection images to obtain mammograms after image processing and into tomographic sequences of projection images, which were then reconstructed to form 3D tomosynthesis datasets. The realism of the appearance of these mass models was assessed by five radiologists via receiver operating characteristic (ROC) analysis when compared to 54 real masses. All lesions were also given a breast imaging reporting and data system (BIRADS) score. The data sets of 2D mammography and tomosynthesis were read separately. The Kendall's coefficient of concordance was used for the interrater observer agreement assessment for the BIRADS scores per modality. Further paired analysis, using the Wilcoxon signed rank test, of the BIRADS assessment between 2D and tomosynthesis was separately performed for the real masses and for the simulated masses. Results: The area under the ROC curves, averaged over all observers, was 0.54 (95% confidence interval [0.50, 0.66]) for the 2D study, and 0.67 (95% confidence interval [0.55, 0.79]) for the tomosynthesis study. According to the BIRADS scores, the nonspiculated and the spiculated masses varied in their degrees of malignancy from normal (BIRADS 1) to highly

The simulation of 3D mass models in 2D digital mammography and breast tomosynthesis

International Nuclear Information System (INIS)

Shaheen, Eman; De Keyzer, Frederik; Bosmans, Hilde; Ongeval, Chantal Van; Dance, David R.; Young, Kenneth C.

2014-01-01

Purpose: This work proposes a new method of building 3D breast mass models with different morphological shapes and describes the validation of the realism of their appearance after simulation into 2D digital mammograms and breast tomosynthesis images. Methods: Twenty-five contrast enhanced MRI breast lesions were collected and each mass was manually segmented in the three orthogonal views: sagittal, coronal, and transversal. The segmented models were combined, resampled to have isotropic voxel sizes, triangularly meshed, and scaled to different sizes. These masses were referred to as nonspiculated masses and were then used as nuclei onto which spicules were grown with an iterative branching algorithm forming a total of 30 spiculated masses. These 55 mass models were projected into 2D projection images to obtain mammograms after image processing and into tomographic sequences of projection images, which were then reconstructed to form 3D tomosynthesis datasets. The realism of the appearance of these mass models was assessed by five radiologists via receiver operating characteristic (ROC) analysis when compared to 54 real masses. All lesions were also given a breast imaging reporting and data system (BIRADS) score. The data sets of 2D mammography and tomosynthesis were read separately. The Kendall's coefficient of concordance was used for the interrater observer agreement assessment for the BIRADS scores per modality. Further paired analysis, using the Wilcoxon signed rank test, of the BIRADS assessment between 2D and tomosynthesis was separately performed for the real masses and for the simulated masses. Results: The area under the ROC curves, averaged over all observers, was 0.54 (95% confidence interval [0.50, 0.66]) for the 2D study, and 0.67 (95% confidence interval [0.55, 0.79]) for the tomosynthesis study. According to the BIRADS scores, the nonspiculated and the spiculated masses varied in their degrees of malignancy from normal (BIRADS 1) to highly

The simulation of 3D mass models in 2D digital mammography and breast tomosynthesis.

Science.gov (United States)

Shaheen, Eman; De Keyzer, Frederik; Bosmans, Hilde; Dance, David R; Young, Kenneth C; Van Ongeval, Chantal

2014-08-01

This work proposes a new method of building 3D breast mass models with different morphological shapes and describes the validation of the realism of their appearance after simulation into 2D digital mammograms and breast tomosynthesis images. Twenty-five contrast enhanced MRI breast lesions were collected and each mass was manually segmented in the three orthogonal views: sagittal, coronal, and transversal. The segmented models were combined, resampled to have isotropic voxel sizes, triangularly meshed, and scaled to different sizes. These masses were referred to as nonspiculated masses and were then used as nuclei onto which spicules were grown with an iterative branching algorithm forming a total of 30 spiculated masses. These 55 mass models were projected into 2D projection images to obtain mammograms after image processing and into tomographic sequences of projection images, which were then reconstructed to form 3D tomosynthesis datasets. The realism of the appearance of these mass models was assessed by five radiologists via receiver operating characteristic (ROC) analysis when compared to 54 real masses. All lesions were also given a breast imaging reporting and data system (BIRADS) score. The data sets of 2D mammography and tomosynthesis were read separately. The Kendall's coefficient of concordance was used for the interrater observer agreement assessment for the BIRADS scores per modality. Further paired analysis, using the Wilcoxon signed rank test, of the BIRADS assessment between 2D and tomosynthesis was separately performed for the real masses and for the simulated masses. The area under the ROC curves, averaged over all observers, was 0.54 (95% confidence interval [0.50, 0.66]) for the 2D study, and 0.67 (95% confidence interval [0.55, 0.79]) for the tomosynthesis study. According to the BIRADS scores, the nonspiculated and the spiculated masses varied in their degrees of malignancy from normal (BIRADS 1) to highly suggestive for malignancy (BIRADS 5

3D Simulations of NIF Wetted Foam Experiments to Understand the Transition from 2D to 3D Implosion Behavior

Science.gov (United States)

Haines, Brian; Olson, Richard; Yi, Austin; Zylstra, Alex; Peterson, Robert; Bradley, Paul; Shah, Rahul; Wilson, Doug; Kline, John; Leeper, Ramon; Batha, Steve

2017-10-01

The high convergence ratio (CR) of layered Inertial Confinement Fusion capsule implosions contribute to high performance in 1D simulations yet make them more susceptible to hydrodynamic instabilities, contributing to the development of 3D flows. The wetted foam platform is an approach to hot spot ignition to achieve low-to-moderate convergence ratios in layered implosions on the NIF unobtainable using an ice layer. Detailed high-resolution modeling of these experiments in 2D and 3D, including all known asymmetries, demonstrates that 2D hydrodynamics explain capsule performance at CR 12 but become less suitable as the CR increases. Mechanisms for this behavior and detailed comparisons of simulations to experiments on NIF will be presented. To evaluate the tradeoff between increased instability and improved 1D performance, we present a full-scale wetted foam capsule design with 17 Simulations predict that, given currently achievable levels of asymmetry, their effects negate all advantages of increased CR.

Simulated radiographic bone and joint modeling from 3D ankle MRI: feasibility and comparison with radiographs and 2D MRI

Energy Technology Data Exchange (ETDEWEB)

Nordeck, Shaun M. [University of Texas Southwestern Medical College, Dallas, TX (United States); University of Texas Southwestern Medical Center, Musculoskeletal Radiology, Dallas, TX (United States); Koerper, Conrad E.; Adler, Aaron [University of Texas Southwestern Medical College, Dallas, TX (United States); Malhotra, Vidur; Xi, Yin [University of Texas Southwestern Medical Center, Musculoskeletal Radiology, Dallas, TX (United States); Liu, George T. [University of Texas Southwestern Medical Center, Orthopaedic Surgery, Dallas, TX (United States); Chhabra, Avneesh [University of Texas Southwestern Medical Center, Musculoskeletal Radiology, Dallas, TX (United States); University of Texas Southwestern Medical Center, Orthopaedic Surgery, Dallas, TX (United States)

2017-05-15

The purpose of this work is to simulate radiographs from isotropic 3D MRI data, compare relationship of angle and joint space measurements on simulated radiographs with corresponding 2D MRIs and real radiographs (XR), and compare measurement times among the three modalities. Twenty-four consecutive ankles were included, eight males and 16 females, with a mean age of 46 years. Segmented joint models simulating radiographs were created from 3D MRI data sets. Three readers independently performed blinded angle and joint space measurements on the models, corresponding 2D MRIs, and XRs at two time points. Linear mixed models and the intraclass correlation coefficient (ICC) was ascertained, with p values less than 0.05 considered significant. Simulated radiograph models were successfully created in all cases. Good agreement (ICC > 0.65) was noted among all readers across all modalities and among most measurements. Absolute measurement values differed between modalities. Measurement time was significantly greater (p < 0.05) on 2D versus simulated radiographs for most measurements and on XR versus simulated radiographs (p < 0.05) for nearly half the measurements. Simulated radiographs can be successfully generated from 3D MRI data; however, measurements differ. Good inter-reader and moderate-to-good intra-reader reliability was observed and measurements obtained on simulated radiograph models took significantly less time compared to measurements with 2D and generally less time than XR. (orig.)

Detection of anatomical changes in lung cancer patients with 2D time-integrated, 2D time-resolved and 3D time-integrated portal dosimetry: a simulation study

Science.gov (United States)

Wolfs, Cecile J. A.; Brás, Mariana G.; Schyns, Lotte E. J. R.; Nijsten, Sebastiaan M. J. J. G.; van Elmpt, Wouter; Scheib, Stefan G.; Baltes, Christof; Podesta, Mark; Verhaegen, Frank

2017-08-01

The aim of this work is to assess the performance of 2D time-integrated (2D-TI), 2D time-resolved (2D-TR) and 3D time-integrated (3D-TI) portal dosimetry in detecting dose discrepancies between the planned and (simulated) delivered dose caused by simulated changes in the anatomy of lung cancer patients. For six lung cancer patients, tumor shift, tumor regression and pleural effusion are simulated by modifying their CT images. Based on the modified CT images, time-integrated (TI) and time-resolved (TR) portal dose images (PDIs) are simulated and 3D-TI doses are calculated. The modified and original PDIs and 3D doses are compared by a gamma analysis with various gamma criteria. Furthermore, the difference in the D 95% (ΔD 95%) of the GTV is calculated and used as a gold standard. The correlation between the gamma fail rate and the ΔD 95% is investigated, as well the sensitivity and specificity of all combinations of portal dosimetry method, gamma criteria and gamma fail rate threshold. On the individual patient level, there is a correlation between the gamma fail rate and the ΔD 95%, which cannot be found at the group level. The sensitivity and specificity analysis showed that there is not one combination of portal dosimetry method, gamma criteria and gamma fail rate threshold that can detect all simulated anatomical changes. This work shows that it will be more beneficial to relate portal dosimetry and DVH analysis on the patient level, rather than trying to quantify a relationship for a group of patients. With regards to optimizing sensitivity and specificity, different combinations of portal dosimetry method, gamma criteria and gamma fail rate should be used to optimally detect certain types of anatomical changes.

Detection of anatomical changes in lung cancer patients with 2D time-integrated, 2D time-resolved and 3D time-integrated portal dosimetry: a simulation study.

Science.gov (United States)

Wolfs, Cecile J A; Brás, Mariana G; Schyns, Lotte E J R; Nijsten, Sebastiaan M J J G; van Elmpt, Wouter; Scheib, Stefan G; Baltes, Christof; Podesta, Mark; Verhaegen, Frank

2017-07-12

The aim of this work is to assess the performance of 2D time-integrated (2D-TI), 2D time-resolved (2D-TR) and 3D time-integrated (3D-TI) portal dosimetry in detecting dose discrepancies between the planned and (simulated) delivered dose caused by simulated changes in the anatomy of lung cancer patients. For six lung cancer patients, tumor shift, tumor regression and pleural effusion are simulated by modifying their CT images. Based on the modified CT images, time-integrated (TI) and time-resolved (TR) portal dose images (PDIs) are simulated and 3D-TI doses are calculated. The modified and original PDIs and 3D doses are compared by a gamma analysis with various gamma criteria. Furthermore, the difference in the D 95% (ΔD 95% ) of the GTV is calculated and used as a gold standard. The correlation between the gamma fail rate and the ΔD 95% is investigated, as well the sensitivity and specificity of all combinations of portal dosimetry method, gamma criteria and gamma fail rate threshold. On the individual patient level, there is a correlation between the gamma fail rate and the ΔD 95% , which cannot be found at the group level. The sensitivity and specificity analysis showed that there is not one combination of portal dosimetry method, gamma criteria and gamma fail rate threshold that can detect all simulated anatomical changes. This work shows that it will be more beneficial to relate portal dosimetry and DVH analysis on the patient level, rather than trying to quantify a relationship for a group of patients. With regards to optimizing sensitivity and specificity, different combinations of portal dosimetry method, gamma criteria and gamma fail rate should be used to optimally detect certain types of anatomical changes.

X-CSIT: a toolkit for simulating 2D pixel detectors

Science.gov (United States)

Joy, A.; Wing, M.; Hauf, S.; Kuster, M.; Rüter, T.

2015-04-01

A new, modular toolkit for creating simulations of 2D X-ray pixel detectors, X-CSIT (X-ray Camera SImulation Toolkit), is being developed. The toolkit uses three sequential simulations of detector processes which model photon interactions, electron charge cloud spreading with a high charge density plasma model and common electronic components used in detector readout. In addition, because of the wide variety in pixel detector design, X-CSIT has been designed as a modular platform so that existing functions can be modified or additional functionality added if the specific design of a detector demands it. X-CSIT will be used to create simulations of the detectors at the European XFEL, including three bespoke 2D detectors: the Adaptive Gain Integrating Pixel Detector (AGIPD), Large Pixel Detector (LPD) and DePFET Sensor with Signal Compression (DSSC). These simulations will be used by the detector group at the European XFEL for detector characterisation and calibration. For this purpose, X-CSIT has been integrated into the European XFEL's software framework, Karabo. This will further make it available to users to aid with the planning of experiments and analysis of data. In addition, X-CSIT will be released as a standalone, open source version for other users, collaborations and groups intending to create simulations of their own detectors.

Simulations. 3D nuclear reactions; Simulations. Reactions nucleaires en 3D

Energy Technology Data Exchange (ETDEWEB)

Deleurence, Guillaume

2012-05-15

At CEA Saclay, the research programme for the forth generation of nuclear reactors, named 'Astrid' (Advanced Sodium Technological Reactor for Industrial Demonstration) of the Direction of nuclear energy (DEN), uses 2D or 3D movies and a 16 m{sup 2} image wall for the display of simulation results. This digest paper focusses on the technological means used for the simulations: the Curie supercomputer designed by Bull and the images display device. (J.S.)

Isotachophoresis of proteins in a networked microfluidic chip: experiment and 2-D simulation.

Science.gov (United States)

Cui, Huanchun; Dutta, Prashanta; Ivory, Cornelius F

2007-04-01

This paper reports both the experimental application and 2-D simulation of ITP of proteins in a networked microfluidic chip. Experiments demonstrate that a mixture of three fluorescent proteins can be concentrated and stacked into adjacent zones of pure protein under a constant voltage of 100 V over a 2 cm long microchannel. Measurements of the isotachophoretic velocity of the moving zones demonstrates that, during ITP under a constant voltage, the zone velocity decreases as more of the channel is occupied by the terminating electrolyte. A 2-D ITP model based on the Nernst-Planck equations illustrates the stacking and separation features of ITP using simulations of three virtual proteins. The self-sharpening behavior of ITP zones dispersed by a T-junction is clearly demonstrated both by experiment and by simulation. Comparison of 2-D simulations of ITP and zone electrophoresis (ZE) confirms that ZE lacks the ability to resharpen protein zones after they pass through a T-junction.

Simulation of 2D Granular Hopper Flow

Science.gov (United States)

Li, Zhusong; Shattuck, Mark

2012-02-01

Jamming and intermittent granular flow are big problems in industry, and the vertical hopper is a canonical example of these difficulties. We simulate gravity driven flow and jamming of 2D disks in a vertical hopper and compare with identical companion experiments presented in this session. We measure and compare the flow rate and probability for jamming as a function of particle properties and geometry. We evaluate the ability of standard Hertz-Mindlin contact mode to quantitatively predict the experimental flow.

Investigation of turbulent boundary layer flow over 2D bump using highly resolved large eddy simulation

DEFF Research Database (Denmark)

Cavar, Dalibor; Meyer, Knud Erik

2011-01-01

A large eddy simulation (LES) study of turbulent non-equilibrium boundary layer flow over 2 D Bump, at comparatively low Reynolds number Reh = U∞h/ν = 1950, was conducted. A well-known LES issue of obtaining and sustaining turbulent flow inside the computational domain at such low Re, is addresse...... partially confirm a close interdependency between generation and evolution of internal layers and the abrupt changes in the skin friction, previously reported in the literature. © 2011 American Society of Mechanical Engineers....

Numerical simulation of the SLAC X-100 klystron using RKTW2D

International Nuclear Information System (INIS)

Ryne, R.D.; Vlieks, A.E.

1991-05-01

We have performed numerical simulations of the X-100 klystron being developed at Stanford Linear Accelerator Center. The X-100 is being developed as a possible source for the next generation of linear collider, and will be required to produce ∼100 MW of power for a duration of ∼800 ns. Our simulations were performed using the simulation programs RKTW1D and RKTW2D, developed at Lawrence Livermore National Laboratory. The codes were used to investigate the operation of the klystron over a wide range of operating conditions. We will present comparisons of the simulation results with experimental results. 3 refs., 5 figs

Quantum simulation of 2D topological physics in a 1D array of optical cavities.

Science.gov (United States)

Luo, Xi-Wang; Zhou, Xingxiang; Li, Chuan-Feng; Xu, Jin-Shi; Guo, Guang-Can; Zhou, Zheng-Wei

2015-07-06

Orbital angular momentum of light is a fundamental optical degree of freedom characterized by unlimited number of available angular momentum states. Although this unique property has proved invaluable in diverse recent studies ranging from optical communication to quantum information, it has not been considered useful or even relevant for simulating nontrivial physics problems such as topological phenomena. Contrary to this misconception, we demonstrate the incredible value of orbital angular momentum of light for quantum simulation by showing theoretically how it allows to study a variety of important 2D topological physics in a 1D array of optical cavities. This application for orbital angular momentum of light not only reduces required physical resources but also increases feasible scale of simulation, and thus makes it possible to investigate important topics such as edge-state transport and topological phase transition in a small simulator ready for immediate experimental exploration.

Simulation of the Effect of Different Presbyopia-Correcting Intraocular Lenses With Eyes With Previous Laser Refractive Surgery.

Science.gov (United States)

Camps, Vicente J; Miret, Juan J; García, Celia; Tolosa, Angel; Piñero, David P

2018-04-01

To simulate the optical performance of three presbyopia-correcting intraocular lenses (IOLs) implanted in eyes with previous laser refractive surgery. A simulation of the through-focus modulation transfer function (MTF) was performed for three presbyopia-correcting IOLs (Mplus, Oculentis GmbH, Berlin, Germany; Symfony, Johnson & Johnson Vision, Santa Ana, CA; and Mini Well, SIFI S.p.A., Lavinaio, Italy) in one eye with previous myopic LASIK and another with hyperopic LASIK. Real topographic data and the wavefront aberration profile of each IOL obtained with a Hartmann-Shack sensor were used. In the eye with myopic LASIK, all IOLs lost optical quality at near and intermediate distances for 4- and 4.7-mm pupil size. For 3-mm pupil size, the Mini Well IOL showed the best intermediate and near MTF and maintained the far focus independently of the pupil. In the eye with hyperopic LASIK, the Mini Well IOL showed an intermediate, distance, and -4.00-diopter (D) foci for all pupils. The Symfony IOL showed a depth of focus at far and intermediate distance for 3-mm and a focus at -2.50 D in the rest. The Mplus showed a focus of -4.50 and -3.00 D for the 3- and 4-mm pupil, respectively. The Mini Well and Symfony IOLs seem to work better than the Mplus IOL in eyes with previous myopic LASIK. With previous hyperopic LASIK, the Mini Well IOL seems to be able to provide acceptable near, intermediate, and far foci for all pupil sizes. These findings should be confirmed in future clinical studies. [J Refract Surg. 2018;34(4):222-227.]. Copyright 2018, SLACK Incorporated.

2D full-wave simulation of waves in space and tokamak plasmas

Directory of Open Access Journals (Sweden)

Kim Eun-Hwa

2017-01-01

Full Text Available Simulation results using a 2D full-wave code (FW2D for space and NSTX fusion plasmas are presented. The FW2D code solves the cold plasma wave equations using the finite element method. The wave code has been successfully applied to describe low frequency waves in planetary magnetospheres (i.e., dipole geometry and the results include generation and propagation of externally driven ultra-low frequency waves via mode conversion at Mercury and mode coupling, refraction and reflection of internally driven field-aligned propagating left-handed electromagnetic ion cyclotron (EMIC waves at Earth. In this paper, global structure of linearly polarized EMIC waves is examined and the result shows such resonant wave modes can be localized near the equatorial plane. We also adopt the FW2D code to tokamak geometry and examine radio frequency (RF waves in the scape-off layer (SOL of tokamaks. By adopting the rectangular and limiter boundary, we compare the results with existing AORSA simulations. The FW2D code results for the high harmonic fast wave heating case on NSTX with a rectangular vessel boundary shows excellent agreement with the AORSA code.

2D full-wave simulation of waves in space and tokamak plasmas

Science.gov (United States)

Kim, Eun-Hwa; Bertelli, Nicola; Johnson, Jay; Valeo, Ernest; Hosea, Joel

2017-10-01

Simulation results using a 2D full-wave code (FW2D) for space and NSTX fusion plasmas are presented. The FW2D code solves the cold plasma wave equations using the finite element method. The wave code has been successfully applied to describe low frequency waves in planetary magnetospheres (i.e., dipole geometry) and the results include generation and propagation of externally driven ultra-low frequency waves via mode conversion at Mercury and mode coupling, refraction and reflection of internally driven field-aligned propagating left-handed electromagnetic ion cyclotron (EMIC) waves at Earth. In this paper, global structure of linearly polarized EMIC waves is examined and the result shows such resonant wave modes can be localized near the equatorial plane. We also adopt the FW2D code to tokamak geometry and examine radio frequency (RF) waves in the scape-off layer (SOL) of tokamaks. By adopting the rectangular and limiter boundary, we compare the results with existing AORSA simulations. The FW2D code results for the high harmonic fast wave heating case on NSTX with a rectangular vessel boundary shows excellent agreement with the AORSA code.

Numerical simulation of rock cutting using 2D AUTODYN

International Nuclear Information System (INIS)

Woldemichael, D E; Rani, A M Abdul; Lemma, T A; Altaf, K

2015-01-01

In a drilling process for oil and gas exploration, understanding of the interaction between the cutting tool and the rock is important for optimization of the drilling process using polycrystalline diamond compact (PDC) cutters. In this study the finite element method in ANSYS AUTODYN-2D is used to simulate the dynamics of cutter rock interaction, rock failure, and fragmentation. A two-dimensional single PDC cutter and rock model were used to simulate the orthogonal cutting process and to investigate the effect of different parameters such as depth of cut, and back rake angle on two types of rocks (sandstone and limestone). In the simulation, the cutting tool was dragged against stationary rock at predetermined linear velocity and the depth of cut (1,2, and 3 mm) and the back rake angles(-10°, 0°, and +10°) were varied. The simulation result shows that the +10° back rake angle results in higher rate of penetration (ROP). Increasing depth of cut leads to higher ROP at the cost of higher cutting force. (paper)

Comparison of 2D simulations of detached divertor plasmas with divertor Thomson measurements in the DIII-D tokamak

Directory of Open Access Journals (Sweden)

T.D. Rognlien

2017-08-01

Full Text Available A modeling study is reported using new 2D data from DIII-D tokamak divertor plasmas and improved 2D transport model that includes large cross-field drifts for the numerically difficult low anomalous transport regime associated with the H-mode. The data set, which spans a range of plasma densities for both forward and reverse toroidal magnetic field (Bt, is provided by divertor Thomson scattering (DTS. Measurements utilizing X-point sweeping give corresponding 2D profiles of electron temperature (Te and density (ne across both divertor legs for individual discharges. The simulations focus on the open magnetic field-line regions, though they also include a small region of closed field lines. The calculations show the same features of in/out divertor plasma asymmetries as measured in the experiment, with the normal Bt direction (ion ∇B drift toward the X-point having higher ne and lower Te in the inner divertor leg than outer. Corresponding emission data for total radiated power shows a strong inner-divertor/outer-divertor asymmetry that is reproduced by the simulations. These 2D UEDGE transport simulations are enabled for steep-gradient H-mode conditions by newly implemented algorithms to control isolated grid-scale irregularities.

Comparison Between 2-D and 3-D Stiffness Matrix Model Simulation of Sasw Inversion for Pavement Structure

Directory of Open Access Journals (Sweden)

Sri Atmaja P. Rosidi

2007-01-01

Full Text Available The Spectral Analysis of Surface Wave (SASW method is a non-destructive in situ seismic technique used to assess and evaluate the material stiffness (dynamic elastic modulus and thickness of pavement layers at low strains. These values can be used analytically to calculate load capacities in order to predict the performance of pavement system. The SASW method is based on the dispersion phenomena of Rayleigh waves in layered media. In order to get the actual shear wave velocities, 2-D and 3-D models are used in the simulation of the inversion process for best fitting between theoretical and empirical dispersion curves. The objective of this study is to simulate and compare the 2-D and 3-D model of SASW analysis in the construction of the theoretical dispersion curve for pavement structure evaluation. The result showed that the dispersion curve from the 3-D model was similar with the dispersion curve of the actual pavement profile compared to the 2-D model. The wave velocity profiles also showed that the 3-D model used in the SASW analysis is able to detect all the distinct layers of flexible pavement units.

2.5D Simulation of basin-edge effects on the ground motion ...

Indian Academy of Sciences (India)

R. Narasimhan (Krishtel eMaging) 1461 1996 Oct 15 13:05:22

The effects of basin-edge and soil velocity on the ground motion characteristics have been simulated ... Figure 1. 3-D and 2.5-D radial, transverse and vertical components of the radiation for .... sedimentary basin deserve a particular attention.

2D and 3D core-collapse supernovae simulation results obtained with the CHIMERA code

Energy Technology Data Exchange (ETDEWEB)

Bruenn, S W; Marronetti, P; Dirk, C J [Physics Department, Florida Atlantic University, 777 W. Glades Road, Boca Raton, FL 33431-0991 (United States); Mezzacappa, A; Hix, W R [Physics Division, Oak Ridge National Laboratory, Oak Ridge, TN 37831-6354 (United States); Blondin, J M [Department of Physics, North Carolina State University, Raleigh, NC 27695-8202 (United States); Messer, O E B [Center for Computational Sciences, Oak Ridge National Laboratory, Oak Ridge, TN 37831-6354 (United States); Yoshida, S, E-mail: bruenn@fau.ed [Max-Planck-Institut fur Gravitationsphysik, Albert Einstein Institut, Golm (Germany)

2009-07-01

Much progress in realistic modeling of core-collapse supernovae has occurred recently through the availability of multi-teraflop machines and the increasing sophistication of supernova codes. These improvements are enabling simulations with enough realism that the explosion mechanism, long a mystery, may soon be delineated. We briefly describe the CHIMERA code, a supernova code we have developed to simulate core-collapse supernovae in 1, 2, and 3 spatial dimensions. We then describe the results of an ongoing suite of 2D simulations initiated from a 12, 15, 20, and 25 M{sub o-dot} progenitor. These have all exhibited explosions and are currently in the expanding phase with the shock at between 5,000 and 20,000 km. We also briefly describe an ongoing simulation in 3 spatial dimensions initiated from the 15 M{sub o-dot} progenitor.

Conjunction of 2D and 3D modified flow solvers for simulating spatio-temporal wind induced hydrodynamics in the Caspian Sea

Science.gov (United States)

Zounemat-Kermani, Mohammad; Sabbagh-Yazdi, Saeed-Reza

2010-06-01

The main objective of this study is the simulation of flow dynamics in the deep parts of the Caspian Sea, in which the southern and middle deep regions are surrounded by considerable areas of shallow zones. To simulate spatio-temporal wind induced hydrodynamics in deep waters, a conjunctive numerical model consisting of a 2D depth average model and a 3D pseudo compressible model is proposed. The 2D model is applied to determine time dependent free surface oscillations as well as the surface velocity patterns and is conjunct to the 3D flow solver for computing three-dimensional velocity and pressure fields which coverage to steady state for the top boundary condition. The modified 2D and 3D sets of equations are conjunct considering interface shear stresses. Both sets of 2D and 3D equations are solved on unstructured triangular and tetrahedral meshes using the Galerkin Finite Volume Method. The conjunctive model is utilized to investigate the deep currents affected by wind, Coriolis forces and the river inflow conditions of the Caspian Sea. In this study, the simulation of flow field due to major winds as well as transient winds in the Caspian Sea during a period of 6 hours in the winter season has been conducted and the numerical results for water surface level are then compared to the 2D numerical results.

Precipitation Processes Developed During ARM (1997), TOGA COARE (1992), GATE (1974), SCSMEX (1998), and KWAJEX (1999): Consistent 2D, Semi-3D and 3D Cloud Resolving Model Simulations

Science.gov (United States)

Tao, W-K.

2003-01-01

Real clouds and cloud systems are inherently three-dimensional (3D). Because of the limitations in computer resources, however, most cloud-resolving models (CRMs) today are still two-dimensional (2D). A few 3D CRMs have been used to study the response of clouds to large-scale forcing. In these 3D simulations, the model domain was small, and the integration time was 6 hours. Only recently have 3D experiments been performed for multi-day periods for tropical cloud systems with large horizontal domains at the National Center for Atmospheric Research (NACAR) and at NASA Goddard Space Flight Center . At Goddard, a 3D Goddard Cumulus Ensemble (GCE) model was used to simulate periods during TOGA COARE, SCSMEX and KWAJEX using 512 by 512 km domain (with 2 km resolution). The results indicate that surface precipitation and latent heating profiles are very similar between the 2D and 3D GCE model simulations. The reason for the strong similarity between the 2D and 3D CRM simulations is that the same observed large-scale advective tendencies of potential temperature, water vapor mixing ratio, and horizontal momentum were used as the main focusing in both the 2D and 3D models. Interestingly, the 2D and 3D versions of the CRM used at CSU showed significant differences in the rainfall and cloud statistics for three ARM cases. The major objectives of this paper are: (1) to assess the performance of the super-parameterization technique, (2) calculate and examine the surface energy (especially radiation) and water budgets, and (3) identify the differences and similarities in the organization and entrainment rates of convection between simulated 2D and 3D cloud systems.

Nonlinear soil-structure interaction calculations simulating the SIMQUAKE experiment using STEALTH 2D

Science.gov (United States)

Tang, H. T.; Hofmann, R.; Yee, G.; Vaughan, D. K.

1980-01-01

Transient, nonlinear soil-structure interaction simulations of an Electric Power Research Institute, SIMQUAKE experiment were performed using the large strain, time domain STEALTH 2D code and a cyclic, kinematically hardening cap soil model. Results from the STEALTH simulations were compared to identical simulations performed with the TRANAL code and indicate relatively good agreement between all the STEALTH and TRANAL calculations. The differences that are seen can probably be attributed to: (1) large (STEALTH) vs. small (TRANAL) strain formulation and/or (2) grid discretization differences.

2-D simulations of the implosion, collapse and stagnation of laser fusion shells

International Nuclear Information System (INIS)

Atzeni, S.; Guerrieri, A.

1989-01-01

We discuss the method, model and first results of 2-D numerical simulations of the entire history of gas-filled shells irradiated by laser pulses with long wavelength non-uniformities. Although this issue has already been addressed in connection with the design of reactor targets, or with the interpretation of experimental results, a complete, clear, and quantitative picture of the relevant phenomenology is still missing. In general, the history of a target can be divided into three phases, namely, the acceleration and inertial phase of the implosion (I;t≤t 0 ), the shock collapse and reflection (II,t 0 ≤t≤t ' 0 ) and the stagnation (t ' 0 ≤t≤t 1 ). In a previous study, we were able to study quantitatively phase I and to get some qualitative information on phase II. At t≅t 0 , however, negative area zones occurred in the mesh of our purely Lagrangian code, and the simulations became unreliable. We have now upgraded our code, by introducing an automatic mesh-rezoning package, which allows us to follow with reasonable accuracy phase II and III of the target implosion. (author) 9 refs., 6 figs

Model-based meta-analysis for comparing Vitamin D2 and D3 parent-metabolite pharmacokinetics.

Science.gov (United States)

Ocampo-Pelland, Alanna S; Gastonguay, Marc R; Riggs, Matthew M

2017-08-01

Association of Vitamin D (D3 & D2) and its 25OHD metabolite (25OHD3 & 25OHD2) exposures with various diseases is an active research area. D3 and D2 dose-equivalency and each form's ability to raise 25OHD concentrations are not well-defined. The current work describes a population pharmacokinetic (PK) model for D2 and 25OHD2 and the use of a previously developed D3-25OHD3 PK model [1] for comparing D3 and D2-related exposures. Public-source D2 and 25OHD2 PK data in healthy or osteoporotic populations, including 17 studies representing 278 individuals (15 individual-level and 18 arm-level units), were selected using search criteria in PUBMED. Data included oral, single and multiple D2 doses (400-100,000 IU/d). Nonlinear mixed effects models were developed simultaneously for D2 and 25OHD2 PK (NONMEM v7.2) by considering 1- and 2-compartment models with linear or nonlinear clearance. Unit-level random effects and residual errors were weighted by arm sample size. Model simulations compared 25OHD exposures, following repeated D2 and D3 oral administration across typical dosing and baseline ranges. D2 parent and metabolite were each described by 2-compartment models with numerous parameter estimates shared with the D3-25OHD3 model [1]. Notably, parent D2 was eliminated (converted to 25OHD) through a first-order clearance whereas the previously published D3 model [1] included a saturable non-linear clearance. Similar to 25OHD3 PK model results [1], 25OHD2 was eliminated by a first-order clearance, which was almost twice as fast as the former. Simulations at lower baselines, following lower equivalent doses, indicated that D3 was more effective than D2 at raising 25OHD concentrations. Due to saturation of D3 clearance, however, at higher doses or baselines, the probability of D2 surpassing D3's ability to raise 25OHD concentrations increased substantially. Since 25OHD concentrations generally surpassed 75 nmol/L at these higher baselines by 3 months, there would be no

Fast 2D Fluid-Analytical Simulation of IEDs and Plasma Uniformity in Multi-frequency CCPs

Science.gov (United States)

Kawamura, E.; Lieberman, M. A.; Graves, D. B.

2014-10-01

A fast 2D axisymmetric fluid-analytical model using the finite elements tool COMSOL is interfaced with a 1D particle-in-cell (PIC) code to study ion energy distributions (IEDs) in multi-frequency argon capacitively coupled plasmas (CCPs). A bulk fluid plasma model which solves the time-dependent plasma fluid equations is coupled with an analytical sheath model which solves for the sheath parameters. The fluid-analytical results are used as input to a PIC simulation of the sheath region of the discharge to obtain the IEDs at the wafer electrode. Each fluid-analytical-PIC simulation on a moderate 2.2 GHz CPU workstation with 8 GB of memory took about 15-20 minutes. The 2D multi-frequency fluid-analytical model was compared to 1D PIC simulations of a symmetric parallel plate discharge, showing good agreement. Fluid-analytical simulations of a 2/60/162 MHz argon CCP with a typical asymmetric reactor geometry were also conducted. The low 2 MHz frequency controlled the sheath width and voltage while the higher frequencies controlled the plasma production. A standing wave was observable at the highest frequency of 162 MHz. Adding 2 MHz power to a 60 MHz discharge or 162 MHz to a dual frequency 2 MHz/60 MHz discharge enhanced the plasma uniformity. This work was supported by the Department of Energy Office of Fusion Energy Science Contract DE-SC000193, and in part by gifts from Lam Research Corporation and Micron Corporation.

Simulation Of Seawater Intrusion With 2D And 3D Models: Nauru Island Case Study

Science.gov (United States)

Ghassemi, F.; Jakeman, A. J.; Jacobson, G.; Howard, K. W. F.

1996-03-01

With the advent of large computing capacities during the past few decades, sophisticated models have been developed for the simulation of seawater intrusion in coastal and island aquifers. Currently, several models are commercially available for the simulation of this problem. This paper describes the mathematical basis and application of the SUTRA and HST3D models to simulate seawater intrusion in Nauru Island, in the central Pacific Ocean. A comparison of the performance and limitations of these two models in simulating a real problem indicates that three-dimensional simulation of seawater intrusion with the HST3D model has the major advantage of being able to specify natural boundary conditions as well as pumping stresses. However, HST3D requires a small grid size and short time steps in order to maintain numerical stability and accuracy. These requirements lead to solution of a large set of linear equations that requires the availability of powerful computing facilities in terms of memory and computing speed. Combined results of the two simulation models indicate a safe pumping rate of 400 m3/d for the aquifer on Nauru Island, where additional fresh water is presently needed for the rehabilitation of mined-out land.

2D sparse array transducer optimization for 3D ultrasound imaging

International Nuclear Information System (INIS)

Choi, Jae Hoon; Park, Kwan Kyu

2014-01-01

A 3D ultrasound image is desired in many medical examinations. However, the implementation of a 2D array, which is needed for a 3D image, is challenging with respect to fabrication, interconnection and cabling. A 2D sparse array, which needs fewer elements than a dense array, is a realistic way to achieve 3D images. Because the number of ways the elements can be placed in an array is extremely large, a method for optimizing the array configuration is needed. Previous research placed the target point far from the transducer array, making it impossible to optimize the array in the operating range. In our study, we focused on optimizing a 2D sparse array transducer for 3D imaging by using a simulated annealing method. We compared the far-field optimization method with the near-field optimization method by analyzing a point-spread function (PSF). The resolution of the optimized sparse array is comparable to that of the dense array.

Comparison Between 2D and 3D Simulations of Rate Dependent Friction Using DEM

Science.gov (United States)

Wang, C.; Elsworth, D.

2017-12-01

Rate-state dependent constitutive laws of frictional evolution have been successful in representing many of the first- and second- order components of earthquake rupture. Although this constitutive law has been successfully applied in numerical models, difficulty remains in efficient implementation of this constitutive law in computationally-expensive granular mechanics simulations using discrete element methods (DEM). This study introduces a novel approach in implementing a rate-dependent constitutive relation of contact friction into DEM. This is essentially an implementation of a slip-weakening constitutive law onto local particle contacts without sacrificing computational efficiency. This implementation allows the analysis of slip stability of simulated fault gouge materials. Velocity-stepping experiments are reported on both uniform and textured distributions of quartz and talc as 3D analogs of gouge mixtures. Distinct local slip stability parameters (a-b) are assigned to the quartz and talc, respectively. We separately vary talc content from 0 to 100% in the uniform mixtures and talc layer thickness from 1 to 20 particles in the textured mixtures. Applied shear displacements are cycled through velocities of 1μm/s and 10μm/s. Frictional evolution data are collected and compared to 2D simulation results. We show that dimensionality significantly impacts the evolution of friction. 3D simulation results are more representative of laboratory observed behavior and numerical noise is shown at a magnitude of 0.01 in terms of friction coefficient. Stability parameters (a-b) can be straightforwardly obtained from analyzing velocity steps, and are different from locally assigned (a-b) values. Sensitivity studies on normal stress, shear velocity, particle size, local (a-b) values, and characteristic slip distance (Dc) show that the implementation is sensitive to local (a-b) values and relations between (Dc) and particle size.

Development of 2D particle-in-cell code to simulate high current, low ...

Indian Academy of Sciences (India)

Abstract. A code for 2D space-charge dominated beam dynamics study in beam trans- port lines is developed. The code is used for particle-in-cell (PIC) simulation of z-uniform beam in a channel containing solenoids and drift space. It can also simulate a transport line where quadrupoles are used for focusing the beam.

Electro-thermal analysis and optimisation of edge termination of power diode supported by 2-D/3-D numerical modelling and simulation

International Nuclear Information System (INIS)

Príbytný, P; Donoval, D; Chvála, A; Marek, J; Molnár, M

2014-01-01

Numerical modelling and simulation provide an efficient tool for analysis and optimization of device structure design. In this paper we present the analysis and the geometry optimization of the power module with high power pin diode structure supported by the advanced 2-D/3-D mixed-mode electro-thermal device simulation. The structure under investigation is P + NN + power diode device designed for high reverse voltages and very high forward currents, with a maximum forward surge current up to 2.7 kA.

Non-local electron transport validation using 2D DRACO simulations

Science.gov (United States)

Cao, Duc; Chenhall, Jeff; Moll, Eli; Prochaska, Alex; Moses, Gregory; Delettrez, Jacques; Collins, Tim

2012-10-01

Comparison of 2D DRACO simulations, using a modified versionfootnotetextprivate communications with M. Marinak and G. Zimmerman, LLNL. of the Schurtz, Nicolai and Busquet (SNB) algorithmfootnotetextSchurtz, Nicolai and Busquet, ``A nonlocal electron conduction model for multidimensional radiation hydrodynamics codes,'' Phys. Plasmas 7, 4238(2000). for non-local electron transport, with direct drive shock timing experimentsfootnotetextT. Boehly, et. al., ``Multiple spherically converging shock waves in liquid deuterium,'' Phys. Plasmas 18, 092706(2011). and with the Goncharov non-local modelfootnotetextV. Goncharov, et. al., ``Early stage of implosion in inertial confinement fusion: Shock timing and perturbation evolution,'' Phys. Plasmas 13, 012702(2006). in 1D LILAC will be presented. Addition of an improved SNB non-local electron transport algorithm in DRACO allows direct drive simulations with no need for an electron conduction flux limiter. Validation with shock timing experiments that mimic the laser pulse profile of direct drive ignition targets gives a higher confidence level in the predictive capability of the DRACO code. This research was supported by the University of Rochester Laboratory for Laser Energetics.

Simulation of Degraded Properties of 2D plain Woven C/SiC Composites under Preloading Oxidation Atmosphere

Science.gov (United States)

Chen, Xihui; Sun, Zhigang; Sun, Jianfen; Song, Yingdong

2017-12-01

In this paper, a numerical model which incorporates the oxidation damage model and the finite element model of 2D plain woven composites is presented for simulation of the oxidation behaviors of 2D plain woven C/SiC composite under preloading oxidation atmosphere. The equal proportional reduction method is firstly proposed to calculate the residual moduli and strength of unidirectional C/SiC composite. The multi-scale method is developed to simulate the residual elastic moduli and strength of 2D plain woven C/SiC composite. The multi-scale method is able to accurately predict the residual elastic modulus and strength of the composite. Besides, the simulated residual elastic moduli and strength of 2D plain woven C/SiC composites under preloading oxidation atmosphere show good agreements with experimental results. Furthermore, the preload, oxidation time, temperature and fiber volume fractions of the composite are investigated to show their influences upon the residual elastic modulus and strength of 2D plain woven C/SiC composites.

Precipitation Processes developed during ARM (1997), TOGA COARE (1992), GATE (1974), SCSMEX (1998), and KWAJEX (1999), Consistent 2D, semi-3D and 3D Cloud Resolving Model Simulations

Science.gov (United States)

Tao, Wei-Kuo; Hou, A.; Atlas, R.; Starr, D.; Sud, Y.

2003-01-01

Real clouds and cloud systems are inherently three-dimensional (3D). Because of the limitations in computer resources, however, most cloud-resolving models (CRMs) today are still two-dimensional (2D). A few 3D CRMs have been used to study the response of clouds to large-scale forcing. In these 3D simulations, the model domain was small, and the integration time was 6 hours. The major objectives of this paper are: (1) to assess the performance of the super-parameterization technique (i.e. is 2D or semi-3D CRM appropriate for the super-parameterization?); (2) calculate and examine the surface energy (especially radiation) and water budgets; (3) identify the differences and similarities in the organization and entrainment rates of convection between simulated 2D and 3D cloud systems.

Hemodynamic simulation of the heart using a 2D model and MR data

DEFF Research Database (Denmark)

Adeler, Pernille Thorup

2002-01-01

Computational models of the blood flow in the heart are a useful tool for studying the functioning of the heart. The purpose of this thesis is to achieve a better understanding of hemodynamics of the normal and diseased hearts through the use of a computational model and magnetic resonance (MR......) data. We present a 2D computational model of the blood flow in the left side of the heart. The work is based on Peskin and McQueen's 2D model dimensioned to data on the dog heart, which we improve and adjust using physiological knowledge and MR velocity data to achieve a model of the human heart...... by letting the apical region be inactive. In both of these cases the simulation results compare well with clinically observed data on dogs and humans. We present Peskin and McQueen's 3D model of the entire human heart and the nearby great vessels. We perform a simulation with the model, where we adjust...

Measurement of the hyperfine structure of the 4d2D3/2,5/2 levels and isotope shifts of the 4p2P3/2->4d2D3/2 and 4p2P3/2->4d2D5/2 transitions in gallium 69 and 71

International Nuclear Information System (INIS)

Rehse, Steven J.; Fairbank, William M.; Lee, Siu Au

2001-01-01

The hyperfine structure of the 4d 2 D 3/2,5/2 levels of 69,71 Ga is determined. The 4p 2 P 3/2 ->4d 2 D 3/2 (294.50-nm) and 4p 2 P 3/2 ->4d 2 D 5/2 (294.45-nm) transitions are studied by laser-induced fluorescence in an atomic Ga beam. The hyperfine A constant measured for the 4d 2 D 5/2 level is 77.3±0.9 MHz for 69 Ga and 97.9± 0.7 MHz for 71 Ga (3σ errors). The A constant measured for the 4d 2 D 3/2 level is -36.3±2.2 MHz for 69 Ga and -46.2±3.8 MHz for 71 Ga. These measurements correct sign errors in the previous determination of these constants. For 69 Ga the hyperfine B constants measured for the 4d 2 D 5/2 and the 4d 2 D 3/2 levels are 5.3±4.1 MHz and 4.6±4.2 MHz, respectively. The isotope shift is determined to be 114±8 MHz for the 4p 2 P 3/2 ->4d 2 D 3/2 transition and 115±7 MHz for the 4p 2 P 3/2 ->4d 2 D 5/2 transition. The lines of 71 Ga are shifted to the blue. This is in agreement with previous measurement. [copyright] 2001 Optical Society of America

Statistical 3D damage accumulation model for ion implant simulators

CERN Document Server

Hernandez-Mangas, J M; Enriquez, L E; Bailon, L; Barbolla, J; Jaraiz, M

2003-01-01

A statistical 3D damage accumulation model, based on the modified Kinchin-Pease formula, for ion implant simulation has been included in our physically based ion implantation code. It has only one fitting parameter for electronic stopping and uses 3D electron density distributions for different types of targets including compound semiconductors. Also, a statistical noise reduction mechanism based on the dose division is used. The model has been adapted to be run under parallel execution in order to speed up the calculation in 3D structures. Sequential ion implantation has been modelled including previous damage profiles. It can also simulate the implantation of molecular and cluster projectiles. Comparisons of simulated doping profiles with experimental SIMS profiles are presented. Also comparisons between simulated amorphization and experimental RBS profiles are shown. An analysis of sequential versus parallel processing is provided.

Statistical 3D damage accumulation model for ion implant simulators

International Nuclear Information System (INIS)

Hernandez-Mangas, J.M.; Lazaro, J.; Enriquez, L.; Bailon, L.; Barbolla, J.; Jaraiz, M.

2003-01-01

A statistical 3D damage accumulation model, based on the modified Kinchin-Pease formula, for ion implant simulation has been included in our physically based ion implantation code. It has only one fitting parameter for electronic stopping and uses 3D electron density distributions for different types of targets including compound semiconductors. Also, a statistical noise reduction mechanism based on the dose division is used. The model has been adapted to be run under parallel execution in order to speed up the calculation in 3D structures. Sequential ion implantation has been modelled including previous damage profiles. It can also simulate the implantation of molecular and cluster projectiles. Comparisons of simulated doping profiles with experimental SIMS profiles are presented. Also comparisons between simulated amorphization and experimental RBS profiles are shown. An analysis of sequential versus parallel processing is provided

Numerical simulations in granular matter: The discharge of a 2D silo

Indian Academy of Sciences (India)

... short and elementary review of numerical simulations in granular assemblies, giving the process of discharge of a 2D silo as an example. The strengths and limitations of different approaches are discussed, together with some comments on the specific issues related to the numerics of discontinuous dissipative collisions.

Automatic domain updating technique for improving computational efficiency of 2-D flood-inundation simulation

Science.gov (United States)

Tanaka, T.; Tachikawa, Y.; Ichikawa, Y.; Yorozu, K.

2017-12-01

Flood is one of the most hazardous disasters and causes serious damage to people and property around the world. To prevent/mitigate flood damage through early warning system and/or river management planning, numerical modelling of flood-inundation processes is essential. In a literature, flood-inundation models have been extensively developed and improved to achieve flood flow simulation with complex topography at high resolution. With increasing demands on flood-inundation modelling, its computational burden is now one of the key issues. Improvements of computational efficiency of full shallow water equations are made from various perspectives such as approximations of the momentum equations, parallelization technique, and coarsening approaches. To support these techniques and more improve the computational efficiency of flood-inundation simulations, this study proposes an Automatic Domain Updating (ADU) method of 2-D flood-inundation simulation. The ADU method traces the wet and dry interface and automatically updates the simulation domain in response to the progress and recession of flood propagation. The updating algorithm is as follow: first, to register the simulation cells potentially flooded at initial stage (such as floodplains nearby river channels), and then if a registered cell is flooded, to register its surrounding cells. The time for this additional process is saved by checking only cells at wet and dry interface. The computation time is reduced by skipping the processing time of non-flooded area. This algorithm is easily applied to any types of 2-D flood inundation models. The proposed ADU method is implemented to 2-D local inertial equations for the Yodo River basin, Japan. Case studies for two flood events show that the simulation is finished within two to 10 times smaller time showing the same result as that without the ADU method.

An efficient simulation method of a cyclotron sector-focusing magnet using 2D Poisson code

Energy Technology Data Exchange (ETDEWEB)

Gad Elmowla, Khaled Mohamed M; Chai, Jong Seo, E-mail: jschai@skku.edu; Yeon, Yeong H; Kim, Sangbum; Ghergherehchi, Mitra

2016-10-01

In this paper we discuss design simulations of a spiral magnet using 2D Poisson code. The Independent Layers Method (ILM) is a new technique that was developed to enable the use of two-dimensional simulation code to calculate a non-symmetric 3-dimensional magnetic field. In ILM, the magnet pole is divided into successive independent layers, and the hill and valley shape around the azimuthal direction is implemented using a reference magnet. The normalization of the magnetic field in the reference magnet produces a profile that can be multiplied by the maximum magnetic field in the hill magnet, which is a dipole magnet made of the hills at the same radius. Both magnets are then calculated using the 2D Poisson SUPERFISH code. Then a fully three-dimensional magnetic field is produced using TOSCA for the original spiral magnet, and the comparison of the 2D and 3D results shows a good agreement between both.

Production of the excited charm mesons D1 and D*2 at HERA

International Nuclear Information System (INIS)

Verbytskyi, Andrii

2013-02-01

The production of the excited charm mesons D 1 , D * 2 and D + s1 in ep collisions has been measured with the ZEUS detector at Hera. The data sample taken by the ZEUS detector in the years 2003-2007, corresponding to an integrated luminosity of 373 pb -1 has been used. The masses of the neutral, charged and strange states, the widths of the neutral states, the helicity parameters of D 0 1 and D + s1 were determined and compared with other measurements and with theoretical expectations. The measured helicity parameters of the D 0 1 and D + s1 allows for some mixing of S- and D-waves in their decays to D *± π -+ and D *± K 0 respectively. The measured value of the D 0 1 helicity parameter is also consistent with a pure D-wave decay. Ratios of branching fractions of the two decay modes of the D *0 2 , D *± 2 and D + s1 states were measured and compared with previous measurements. The fractions of charm quarks hadronising into D 1 , D * 2 and D + s1 were measured and are consistent with those obtained in e + e - annihilations. The Grid computing technology has a high importance for modern High Energy Physics. This technology has been successfully used in Zeus experiment for the MC simulations and data analysis. The dedicated infrastructure has been maintained by the author since 2010. In addition to continuous support, the author has upgraded and improved the performance of the Grid MC simulations and contributed to the Zeus data preservation project.

Reynolds-Averaged Navier-Stokes Simulation of a 2D Circulation Control Wind Tunnel Experiment

Science.gov (United States)

Allan, Brian G.; Jones, Greg; Lin, John C.

2011-01-01

Numerical simulations are performed using a Reynolds-averaged Navier-Stokes (RANS) flow solver for a circulation control airfoil. 2D and 3D simulation results are compared to a circulation control wind tunnel test conducted at the NASA Langley Basic Aerodynamics Research Tunnel (BART). The RANS simulations are compared to a low blowing case with a jet momentum coefficient, C(sub u), of 0:047 and a higher blowing case of 0.115. Three dimensional simulations of the model and tunnel walls show wall effects on the lift and airfoil surface pressures. These wall effects include a 4% decrease of the midspan sectional lift for the C(sub u) 0.115 blowing condition. Simulations comparing the performance of the Spalart Allmaras (SA) and Shear Stress Transport (SST) turbulence models are also made, showing the SST model compares best to the experimental data. A Rotational/Curvature Correction (RCC) to the turbulence model is also evaluated demonstrating an improvement in the CFD predictions.

2D radiation-magnetohydrodynamic simulations of SATURN imploding Z-pinches

International Nuclear Information System (INIS)

Hammer, J.H.; Eddleman, J.L.; Springer, P.T.

1995-01-01

Z-pinch implosions driven by the SATURN device at Sandia National Laboratory are modeled with a 2D radiation magnetohydrodynamic (MHD) code, showing strong growth of magneto-Rayleigh Taylor (MRT) instability. Modeling of the linear and nonlinear development of MRT modes predicts growth of bubble-spike structures that increase the time span of stagnation and the resulting x-ray pulse width. Radiation is important in the pinch dynamics keeping the sheath relatively cool during the run-in and releasing most of the stagnation energy. The calculations give x-ray pulse widths and magnitudes in reasonable agreement with experiments, but predict a radiating region that is too dense and radially localized at stagnation. We also consider peaked initial density profiles with constant imploding sheath velocity that should reduce MRT instability and improve performance. 2D krypton simulations show an output x-ray power > 80 TW for the peaked profile

Development of hybrid core calculation system using 2-D full-core heterogeneous transport calculation and 3-D advanced nodal calculation

International Nuclear Information System (INIS)

Sugimura, Naoki; Mori, Masaaki; Hijiya, Masayuki; Ushio, Tadashi; Arakawa, Yasushi

2004-01-01

This paper presents the Hybrid Core Calculation System which is a very rigorous but a practical calculation system applicable to best estimate core design calculations taking advantage of the recent remarkable progress of computers. The basic idea of this system is to generate the correction factors for assembly homogenized cross sections, discontinuity factors, etc. by comparing the CASMO-4 and SIMULATE-3 2-D core calculation results under the consistent calculation condition and then apply them for SIMULATE-3 3-D calculation. The CASMO-4 2-D heterogeneous core calculation is performed for each depletion step with the core conditions previously determined by ordinary SIMULATE-3 core calculation to avoid time consuming iterative calculations searching for the critical boron concentrations while treating the thermal hydraulic feedback. The final SIMULATE-3 3-D calculation using the correction factors is performed with iterative calculations searching for the critical boron concentrations while treating the thermal hydraulic feedback. (author)

Front instabilities and invasiveness of simulated 3D avascular tumors.

Directory of Open Access Journals (Sweden)

Nikodem J Poplawski

2010-05-01

Full Text Available We use the Glazier-Graner-Hogeweg model to simulate three-dimensional (3D, single-phenotype, avascular tumors growing in an homogeneous tissue matrix (TM supplying a single limiting nutrient. We study the effects of two parameters on tumor morphology: a diffusion-limitation parameter defined as the ratio of the tumor-substrate consumption rate to the substrate-transport rate, and the tumor-TM surface tension. This initial model omits necrosis and oxidative/hypoxic metabolism effects, which can further influence tumor morphology, but our simplified model still shows significant parameter dependencies. The diffusion-limitation parameter determines whether the growing solid tumor develops a smooth (noninvasive or fingered (invasive interface, as in our earlier two-dimensional (2D simulations. The sensitivity of 3D tumor morphology to tumor-TM surface tension increases with the size of the diffusion-limitation parameter, as in 2D. The 3D results are unexpectedly close to those in 2D. Our results therefore may justify using simpler 2D simulations of tumor growth, instead of more realistic but more computationally expensive 3D simulations. While geometrical artifacts mean that 2D sections of connected 3D tumors may be disconnected, the morphologies of 3D simulated tumors nevertheless correlate with the morphologies of their 2D sections, especially for low-surface-tension tumors, allowing the use of 2D sections to partially reconstruct medically-important 3D-tumor structures.

Application of 2-D Simulations to Z-Pinch Experiment Design and Analysis

International Nuclear Information System (INIS)

Peterson, D.L.; Bowers, R.L.; Matuska, W.; Chandler, G.A.; Deeney, C.; Derzon, M.S.; Matzen, M.K.; Mock, R.C.; Nash, T.J.; Sanford, T.W.L.; Spielman, R.B.; Struve, K.W.

1998-01-01

The successful 2-D simulations of z-pinch experiments (reproducing such features as the measured experimental current drive, radiation pulse shape, peak power and total radiated energy) can lead to a better understanding of the underlying physics in z-pinch implosions and to the opportunity to use such simulations in the analysis of experimental data and in the design of new experiments. Such use has been made with LANL simulations of experiments on the Sandia Saturn and Z accelerators. Applications have included ''vacuum'' and ''dynamic'' hohlraum experiments; variations in mass, radius and length; and ''nested'' array configurations. Notable examples include the explanation of the power/length results in reduced length pinches and the prediction of the current best power and pulsewidth nested array experiment. Examples of circumstances where the simulation results do not match the experiments will be given along with a discussion of opportunities for improved simulation results

Detection of phasic dopamine by D1 and D2 striatal medium spiny neurons.

Science.gov (United States)

Yapo, Cedric; Nair, Anu G; Clement, Lorna; Castro, Liliana R; Hellgren Kotaleski, Jeanette; Vincent, Pierre

2017-12-15

Brief dopamine events are critical actors of reward-mediated learning in the striatum; the intracellular cAMP-protein kinase A (PKA) response of striatal medium spiny neurons to such events was studied dynamically using a combination of biosensor imaging in mouse brain slices and in silico simulations. Both D1 and D2 medium spiny neurons can sense brief dopamine transients in the sub-micromolar range. While dopamine transients profoundly change cAMP levels in both types of medium spiny neurons, the PKA-dependent phosphorylation level remains unaffected in D2 neurons. At the level of PKA-dependent phosphorylation, D2 unresponsiveness depends on protein phosphatase-1 (PP1) inhibition by DARPP-32. Simulations suggest that D2 medium spiny neurons could detect transient dips in dopamine level. The phasic release of dopamine in the striatum determines various aspects of reward and action selection, but the dynamics of the dopamine effect on intracellular signalling remains poorly understood. We used genetically encoded FRET biosensors in striatal brain slices to quantify the effect of transient dopamine on cAMP or PKA-dependent phosphorylation levels, and computational modelling to further explore the dynamics of this signalling pathway. Medium-sized spiny neurons (MSNs), which express either D 1 or D 2 dopamine receptors, responded to dopamine by an increase or a decrease in cAMP, respectively. Transient dopamine showed similar sub-micromolar efficacies on cAMP in both D1 and D2 MSNs, thus challenging the commonly accepted notion that dopamine efficacy is much higher on D 2 than on D 1 receptors. However, in D2 MSNs, the large decrease in cAMP level triggered by transient dopamine did not translate to a decrease in PKA-dependent phosphorylation level, owing to the efficient inhibition of protein phosphatase 1 by DARPP-32. Simulations further suggested that D2 MSNs can also operate in a 'tone-sensing' mode, allowing them to detect transient dips in basal dopamine

Power loss analysis of n-PASHA cells validated by 2D simulations

Energy Technology Data Exchange (ETDEWEB)

Janssen, G.J.M.; Gutjahr, A.; Burgers, A.R.; Saynova, D.S.; Cesar, I.; Romijn, I.G.

2013-10-15

To reach >21% efficiency for the n-Pasha (passivated all sides H-pattern) cell of ECN, reliable power-loss analyses are essential. A power-loss analysis is presented that is based on experimental data but validated and completed by 2D simulations. The analysis is used to identify the key factors that will contribute most to achieving >21% efficiency.

Dynamics and Chemistry in Jovian Atmospheres: 2D Hydrodynamical Simulations

Science.gov (United States)

Bordwell, B. R.; Brown, B. P.; Oishi, J.

2016-12-01

A key component of our understanding of the formation and evolution of planetary systems is chemical composition. Problematically, however, in the atmospheres of cooler gas giants, dynamics on the same timescale as chemical reactions pull molecular abundances out of thermochemical equilibrium. These disequilibrium abundances are treated using what is known as the "quench" approximation, based upon the mixing length theory of convection. The validity of this approximation is questionable, though, as the atmospheres of gas giants encompass two distinct dynamic regimes: convective and radiative. To resolve this issue, we conduct 2D hydrodynamical simulations using the state-of-the-art pseudospectral simulation framework Dedalus. In these simulations, we solve the fully compressible equations of fluid motion in a local slab geometry that mimics the structure of a planetary atmosphere (convective zone underlying a radiative zone). Through the inclusion of passive tracers, we explore the transport properties of both regimes, and assess the validity of the classical eddy diffusion parameterization. With the addition of active tracers, we examine the interactions between dynamical and chemical processes, and generate prescriptions for the observational community. By providing insight into mixing and feedback mechanisms in Jovian atmospheres, this research lays a solid foundation for future global simulations and the construction of physically-sound models for current and future observations.

Lattice Boltzmann Simulation of Collision between 2D Circular Particles Suspension in Couette Flow

Directory of Open Access Journals (Sweden)

Li-Zhong Huang

2013-01-01

Full Text Available Collision between 2D circular particles suspension in Couette flow is simulated by using multiple-relaxation-time based lattice Boltzmann and direct forcing/fictitious domain method in this paper. The patterns of particle collisions are simulated and analyzed in detail by changing the velocity of top and bottom walls in the Couette flow. It can be seen from the simulation results that, while the velocity is large enough, the number of collisions between particles will change little as this velocity varies.

Fast 2D fluid-analytical simulation of ion energy distributions and electromagnetic effects in multi-frequency capacitive discharges

Science.gov (United States)

Kawamura, E.; Lieberman, M. A.; Graves, D. B.

2014-12-01

A fast 2D axisymmetric fluid-analytical plasma reactor model using the finite elements simulation tool COMSOL is interfaced with a 1D particle-in-cell (PIC) code to study ion energy distributions (IEDs) in multi-frequency capacitive argon discharges. A bulk fluid plasma model, which solves the time-dependent plasma fluid equations for the ion continuity and electron energy balance, is coupled with an analytical sheath model, which solves for the sheath parameters. The time-independent Helmholtz equation is used to solve for the fields and a gas flow model solves for the steady-state pressure, temperature and velocity of the neutrals. The results of the fluid-analytical model are used as inputs to a PIC simulation of the sheath region of the discharge to obtain the IEDs at the target electrode. Each 2D fluid-analytical-PIC simulation on a moderate 2.2 GHz CPU workstation with 8 GB of memory took about 15-20 min. The multi-frequency 2D fluid-analytical model was compared to 1D PIC simulations of a symmetric parallel-plate discharge, showing good agreement. We also conducted fluid-analytical simulations of a multi-frequency argon capacitively coupled plasma (CCP) with a typical asymmetric reactor geometry at 2/60/162 MHz. The low frequency 2 MHz power controlled the sheath width and sheath voltage while the high frequencies controlled the plasma production. A standing wave was observable at the highest frequency of 162 MHz. We noticed that adding 2 MHz power to a 60 MHz discharge or 162 MHz to a dual frequency 2 MHz/60 MHz discharge can enhance the plasma uniformity. We found that multiple frequencies were not only useful for controlling IEDs but also plasma uniformity in CCP reactors.

Stereoscopic (3D) versus monoscopic (2D) laparoscopy: comparative study of performance using advanced HD optical systems in a surgical simulator model.

Science.gov (United States)

Schoenthaler, Martin; Schnell, Daniel; Wilhelm, Konrad; Schlager, Daniel; Adams, Fabian; Hein, Simon; Wetterauer, Ulrich; Miernik, Arkadiusz

2016-04-01

To compare task performances of novices and experts using advanced high-definition 3D versus 2D optical systems in a surgical simulator model. Fifty medical students (novices in laparoscopy) were randomly assigned to perform five standardized tasks adopted from the Fundamentals of Laparoscopic Surgery (FLS) curriculum in either a 2D or 3D laparoscopy simulator system. In addition, eight experts performed the same tasks. Task performances were evaluated using a validated scoring system of the SAGES/FLS program. Participants were asked to rate 16 items in a questionnaire. Overall task performance of novices was significantly better using stereoscopic visualization. Superiority of performances in 3D reached a level of significance for tasks peg transfer and precision cutting. No significant differences were noted in performances of experts when using either 2D or 3D. Overall performances of experts compared to novices were better in both 2D and 3D. Scorings in the questionnaires showed a tendency toward lower scores in the group of novices using 3D. Stereoscopic imaging significantly improves performance of laparoscopic phantom tasks of novices. The current study confirms earlier data based on a large number of participants and a standardized task and scoring system. Participants felt more confident and comfortable when using a 3D laparoscopic system. However, the question remains open whether these findings translate into faster and safer operations in a clinical setting.

VC and ACIS/HOOPS based semi-physical virtual prototype design and motion simulation of 2D scanning mirror

Science.gov (United States)

Liu, Xiangyan; Dai, Xiaobing; He, Xudong; Gao, Pengcheng

2013-10-01

Image-spectrum integrated instrument is an infrared scanning system which integrates optics, mechanics, electrics and information processing. Not only can it achieve scene imaging, but also it can detect, track and identify targets of interests in the scene through acquiring their spectra. After having a brief introduction to image-spectrum integrated instrument and analyzing how 2D scanning mirror works, this paper built 3D model of 2D scanning mirror and simulated its motion using two PCs basing on VC++ and ACIS/HOOPS. Two PCs communicate with each other through serial ports. One PC serves as host computer, on which controlling software runs, is responsible for loading image sequence, image processing, target detecting, and generating and sending motion commands to scanning mirror. The other serves as slave computer, on which scanning mirror motion simulation software runs, is responsible for receiving motion commands to control scanning mirror to finish corresponding movements. This method proposed in this paper adopted semi-physical virtual prototype technology and used real scene image sequence to control virtual 2D scanning mirror and simulates motion of real 2D scanning mirror. It has no need for real scanning mirror and is of important practical significance for debugging controlling software of 2D scanning mirror.

A 2d Block Model For Landslide Simulation: An Application To The 1963 Vajont Case

Science.gov (United States)

Tinti, S.; Zaniboni, F.; Manucci, A.; Bortolucci, E.

A 2D block model to study the motion of a sliding mass is presented. The slide is par- titioned into a matrix of blocks the basis of which are quadrilaterals. The blocks move on a specified sliding surface and follow a trajectory that is computed by the model. The forces acting on the blocks are gravity, basal friction, buoyancy in case of under- water motion, and interaction with neighbouring blocks. At any time step, the position of the blocks on the sliding surface is determined in curvilinear (local) co-ordinates by computing the position of the vertices of the quadrilaterals and the position of the block centre of mass. Mathematically, the topology of the system is invariant during the motion, which means that the number of blocks is constant and that each block has always the same neighbours. Physically, this means that blocks are allowed to change form, but not to penetrate into each other, not to coalesce, not to split. The change of form is compensated by the change of height, under the computational assumption that the block volume is constant during motion: consequently lateral expansion or contraction yield respectively height reduction or increment of the blocks. This model is superior to the analogous 1D model where the mass is partitioned into a chain of interacting blocks. 1D models require the a-priori specification of the sliding path, that is of the trajectory of the blocks, which the 2D block model supplies as one of its output. In continuation of previous studies on the catastrophic slide of Vajont that occurred in 1963 in northern Italy and caused more than 2000 victims, the 2D block model has been applied to the Vajont case. The results are compared to the outcome of the 1D model, and more importantly to the observational data concerning the deposit position and morphology. The agreement between simulation and data is found to be quite good.

From 2D to 3D turbulence through 2D3C configurations

Science.gov (United States)

Buzzicotti, Michele; Biferale, Luca; Linkmann, Moritz

2017-11-01

We study analytically and numerically the geometry of the nonlinear interactions and the resulting energy transfer directions of 2D3C flows. Through a set of suitably designed Direct Numerical Simulations we also study the coupling between several 2D3C flows, where we explore the transition between 2D and fully 3D turbulence. In particular, we find that the coupling of three 2D3C flows on mutually orthogonal planes subject to small-scale forcing leads to a stationary 3D out-of-equilibrium dynamics at the energy containing scales where the inverse cascade is directly balanced by a forward cascade carried by a different subsets of interactions. ERC AdG Grant No 339032 NewTURB.

Simulation of current generation in a 3-D plasma model

International Nuclear Information System (INIS)

Tsung, F.S.; Dawson, J.M.

1996-01-01

Two wires carrying current in the same direction will attract each other, and two wires carrying current in the opposite direction will repel each other. Now, consider a test charge in a plasma. If the test charge carries current parallel to the plasma, then it will be pulled toward the plasma core, and if the test charge carries current anti-parallel to the plasma, then it will be pushed to the edge. The electromagnetic coupling between the plasma and a test charge (i.e., the A parallel circ v parallel term in the test charge's Hamiltonian) breaks the symmetry in the parallel direction, and gives rise to a diffusion coefficient which is dependent on the particle's parallel velocity. This is the basis for the open-quotes preferential lossclose quotes mechanism described in the work by Nunan et al. In our previous 2+1/2 D work, in both cylindrical and toroidal geometries, showed that if the plasma column is centrally fueled, then an initial current increases steadily. The results in straight, cylindrical plasmas showed that self generated parallel current arises without trapped particle or neoclassical diffusion, as assumed by the bootstrap theory. It suggests that the fundamental mechanism seems to be the conservation of particles canonical momenta in the direction of the ignorable coordinate. We have extended the simulation to 3D to verify the model put forth. A scalable 3D EM-PIC code, with a localized field-solver, has been implemented to run on a large class of parallel computers. On the 512-node SP2 at Cornell Theory Center, we have benchmarked the 2+1/2 D calculations using 32 grids in the previously ignored direction, and a 100-fold increase in the number of particles. Our preliminary results show good agreements between the 2+1/2 D and the 3D calculations. We will present our 3D results at the meeting

Multiple-canister flow and transport code in 2-dimensional space. MCFT2D: user's manual

International Nuclear Information System (INIS)

Lim, Doo-Hyun

2006-03-01

A two-dimensional numerical code, MCFT2D (Multiple-Canister Flow and Transport code in 2-Dimensional space), has been developed for groundwater flow and radionuclide transport analyses in a water-saturated high-level radioactive waste (HLW) repository with multiple canisters. A multiple-canister configuration and a non-uniform flow field of the host rock are incorporated in the MCFT2D code. Effects of heterogeneous flow field of the host rock on migration of nuclides can be investigated using MCFT2D. The MCFT2D enables to take into account the various degrees of the dependency of canister configuration for nuclide migration in a water-saturated HLW repository, while the dependency was assumed to be either independent or perfectly dependent in previous studies. This report presents features of the MCFT2D code, numerical simulation using MCFT2D code, and graphical representation of the numerical results. (author)

A 1D-2D coupled SPH-SWE model applied to open channel flow simulations in complicated geometries

Science.gov (United States)

Chang, Kao-Hua; Sheu, Tony Wen-Hann; Chang, Tsang-Jung

2018-05-01

In this study, a one- and two-dimensional (1D-2D) coupled model is developed to solve the shallow water equations (SWEs). The solutions are obtained using a Lagrangian meshless method called smoothed particle hydrodynamics (SPH) to simulate shallow water flows in converging, diverging and curved channels. A buffer zone is introduced to exchange information between the 1D and 2D SPH-SWE models. Interpolated water discharge values and water surface levels at the internal boundaries are prescribed as the inflow/outflow boundary conditions in the two SPH-SWE models. In addition, instead of using the SPH summation operator, we directly solve the continuity equation by introducing a diffusive term to suppress oscillations in the predicted water depth. The performance of the two approaches in calculating the water depth is comprehensively compared through a case study of a straight channel. Additionally, three benchmark cases involving converging, diverging and curved channels are adopted to demonstrate the ability of the proposed 1D and 2D coupled SPH-SWE model through comparisons with measured data and predicted mesh-based numerical results. The proposed model provides satisfactory accuracy and guaranteed convergence.

Fast acceleration of 2D wave propagation simulations using modern computational accelerators.

Directory of Open Access Journals (Sweden)

Wei Wang

Full Text Available Recent developments in modern computational accelerators like Graphics Processing Units (GPUs and coprocessors provide great opportunities for making scientific applications run faster than ever before. However, efficient parallelization of scientific code using new programming tools like CUDA requires a high level of expertise that is not available to many scientists. This, plus the fact that parallelized code is usually not portable to different architectures, creates major challenges for exploiting the full capabilities of modern computational accelerators. In this work, we sought to overcome these challenges by studying how to achieve both automated parallelization using OpenACC and enhanced portability using OpenCL. We applied our parallelization schemes using GPUs as well as Intel Many Integrated Core (MIC coprocessor to reduce the run time of wave propagation simulations. We used a well-established 2D cardiac action potential model as a specific case-study. To the best of our knowledge, we are the first to study auto-parallelization of 2D cardiac wave propagation simulations using OpenACC. Our results identify several approaches that provide substantial speedups. The OpenACC-generated GPU code achieved more than 150x speedup above the sequential implementation and required the addition of only a few OpenACC pragmas to the code. An OpenCL implementation provided speedups on GPUs of at least 200x faster than the sequential implementation and 30x faster than a parallelized OpenMP implementation. An implementation of OpenMP on Intel MIC coprocessor provided speedups of 120x with only a few code changes to the sequential implementation. We highlight that OpenACC provides an automatic, efficient, and portable approach to achieve parallelization of 2D cardiac wave simulations on GPUs. Our approach of using OpenACC, OpenCL, and OpenMP to parallelize this particular model on modern computational accelerators should be applicable to other

Precipitation Processes developed during ARM (1997), TOGA COARE(1992), GATE(1 974), SCSMEX(1998) and KWAJEX(1999): Consistent 2D and 3D Cloud Resolving Model Simulations

Science.gov (United States)

Tao, W.-K.; Shie, C.-H.; Simpson, J.; Starr, D.; Johnson, D.; Sud, Y.

2003-01-01

Real clouds and clouds systems are inherently three dimensional (3D). Because of the limitations in computer resources, however, most cloud-resolving models (CRMs) today are still two-dimensional (2D). A few 3D CRMs have been used to study the response of clouds to large-scale forcing. In these 3D simulations, the model domain was small, and the integration time was 6 hours. Only recently have 3D experiments been performed for multi-day periods for tropical cloud system with large horizontal domains at the National Center for Atmospheric Research. The results indicate that surface precipitation and latent heating profiles are very similar between the 2D and 3D simulations of these same cases. The reason for the strong similarity between the 2D and 3D CRM simulations is that the observed large-scale advective tendencies of potential temperature, water vapor mixing ratio, and horizontal momentum were used as the main forcing in both the 2D and 3D models. Interestingly, the 2D and 3D versions of the CRM used in CSU and U.K. Met Office showed significant differences in the rainfall and cloud statistics for three ARM cases. The major objectives of this project are to calculate and axamine: (1)the surface energy and water budgets, (2) the precipitation processes in the convective and stratiform regions, (3) the cloud upward and downward mass fluxes in the convective and stratiform regions; (4) cloud characteristics such as size, updraft intensity and lifetime, and (5) the entrainment and detrainment rates associated with clouds and cloud systems that developed in TOGA COARE, GATE, SCSMEX, ARM and KWAJEX. Of special note is that the analyzed (model generated) data sets are all produced by the same current version of the GCE model, i.e. consistent model physics and configurations. Trajectory analyse and inert tracer calculation will be conducted to identify the differences and similarities in the organization of convection between simulated 2D and 3D cloud systems.

Ab-initio quantum transport simulation of self-heating in single-layer 2-D materials

Science.gov (United States)

Stieger, Christian; Szabo, Aron; Bunjaku, Teutë; Luisier, Mathieu

2017-07-01

Through advanced quantum mechanical simulations combining electron transport and phonon transport from first-principles, self-heating effects are investigated in n-type transistors with single-layer MoS2, WS2, and black phosphorus as channel materials. The selected 2-D crystals all exhibit different phonon-limited mobility values, as well as electron and phonon properties, which have a direct influence on the increase in their lattice temperature and on the power dissipated inside their channel as a function of the applied gate voltage and electrical current magnitude. This computational study reveals (i) that self-heating plays a much more important role in 2-D materials than in Si nanowires, (ii) that it could severely limit the performance of 2-D devices at high current densities, and (iii) that black phosphorus appears less sensitive to this phenomenon than transition metal dichalcogenides.

Fluence dependent changes of erosion yields and surface morphology of the iron-tungsten model system: SDTrimSP-2D simulation studies

Directory of Open Access Journals (Sweden)

U. von Toussaint

2017-08-01

Full Text Available The effect of different sample structures of an iron-tungsten model system (as a surrogate for reduced activation ferritic martensitic steels like EUROFER on the development of surface morphologies, tungsten surface enrichment and sputter yields under low-energy monoenergetic perpendicular 200 eV deuterium bombardment has been studied with SDTrimSP-2d simulations. Previous modeling studies considering diffusive effects also could reasonably reproduce and explain the experimental results for a large set of experimental parameters like temperature, flux and sample concentration. However, for settings with negligible Fe-W-interdiffusion the fluence needed for steady-state conditions differed between the experiments and the simulations. Thus, the main focus of the present study is directed towards the elucidation of this fluence mismatch. Comparison of one and two-dimensional simulation results reveal a strong dependency of the tungsten enrichment on the sample homogeneity and a significantly delayed reduction of the erosion yield due to a pronounced formation of surface structures from initially flat sample surfaces.

A novel 2.5D finite difference scheme for simulations of resistivity logging in anisotropic media

Science.gov (United States)

Zeng, Shubin; Chen, Fangzhou; Li, Dawei; Chen, Ji; Chen, Jiefu

2018-03-01

The objective of this study is to develop a method to model 3D resistivity well logging problems in 2D formation with anisotropy, known as 2.5D modeling. The traditional 1D forward modeling extensively used in practice lacks the capability of modeling 2D formation. A 2.5D finite difference method (FDM) solving all the electric and magnetic field components simultaneously is proposed. Compared to other previous 2.5D FDM schemes, this method is more straightforward in modeling fully anisotropic media and easy to be implemented. Fourier transform is essential to this FDM scheme, and by employing Gauss-Legendre (GL) quadrature rule the computational time of this step can be greatly reduced. In the numerical examples, we first demonstrate the validity of the FDM scheme with GL rule by comparing with 1D forward modeling for layered anisotropic problems, and then we model a complicated 2D formation case and find that the proposed 2.5D FD scheme is much more efficient than 3D numerical methods.

Landsat-D thematic mapper simulator

Science.gov (United States)

Flanagan, G. F.; Tilton, E. L., III

The design and testing program for the airborne Landsat-D thematic-mapper simulator (TMS) is summarized. The TMS is intended to provide data similar enough to those expected from Landsat-D to facilitate the development of data-processing software. The design process comprised mainly modifications on the existing MSS-simulator fiber optics, dichroics, and detectors to provide 7-channel coverage of the 0.45-12.3-micron range at 60-deg angle of view, corresponding to a 418-element, 13.8-km-wide ground swath. The TMS is carried on a Lear 23 aircraft operating at 750 km/h and 12-m altitude and equipped with a 15.2-cm aerial mapping camera and a ground-updated inertial navigational system. Agricultural, forestry, and geological trial applications are reviewed, and some sample results are given. The significant improvements predicted for the Landsat-D thematic mapper (relative to the Landsat MSS) are seen as confirmed, with the possible exception of the 120-m-resolution version of channel 7.

Numerical simulation of 2D ablation profile in CCI-2 experiment by moving particle semi-implicit method

Energy Technology Data Exchange (ETDEWEB)

Chai, Penghui, E-mail: phchai@vis.t.u-tokyo.ac.jp; Kondo, Masahiro; Erkan, Nejdet; Okamoto, Koji

2016-05-15

Highlights: • Multiphysics models were developed based on Moving Particle Semi-implicit method. • Mixing process, chemical reaction can be simulated in MCCI calculation. • CCI-2 experiment was simulated to validate the models. • Simulation and experimental results for sidewall ablation agree well. • Simulation results confirm the rapid erosion phenomenon observed in the experiment. - Abstract: Numerous experiments have been performed to explore the mechanisms of molten core-concrete interaction (MCCI) phenomena since the 1980s. However, previous experimental results show that uncertainties pertaining to several aspects such as the mixing process and crust behavior remain. To explore the mechanism governing such aspects, as well as to predict MCCI behavior in real severe accident events, a number of simulation codes have been developed for process calculations. However, uncertainties exist among the codes because of the use of different empirical models. In this study, a new computational code is developed using multiphysics models to simulate MCCI phenomena based on the moving particle semi-implicit (MPS) method. Momentum and energy equations are used to solve the velocity and temperature fields, and multiphysics models are developed on the basis of the basic MPS method. The CCI-2 experiment is simulated by applying the developed code. With respect to sidewall ablation, good agreement is observed between the simulation and experimental results. However, axial ablation is slower in the simulation, which is probably due to the underestimation of the enhancement effect of heat transfer provided by the moving bubbles at the bottom. In addition, the simulation results confirm the rapid erosion phenomenon observed in the experiment, which in the numerical simulation is explained by solutal convection provided by the liquid concrete at the corium/concrete interface. The results of the comparison of different model combinations show the effect of each

2.5D real waveform and real noise simulation of receiver functions in 3D models

Science.gov (United States)

Schiffer, Christian; Jacobsen, Bo; Balling, Niels

2014-05-01

There are several reasons why a real-data receiver function differs from the theoretical receiver function in a 1D model representing the stratification under the seismometer. Main reasons are ambient noise, spectral deficiencies in the impinging P-waveform, and wavefield propagation in laterally varying velocity variations. We present a rapid "2.5D" modelling approach which takes these aspects into account, so that a given 3D velocity model of the crust and uppermost mantle can be tested more realistically against observed recordings from seismometer arrays. Each recorded event at each seismometer is simulated individually through the following steps: A 2D section is extracted from the 3D model along the direction towards the hypocentre. A properly slanted plane or curved impulsive wavefront is propagated through this 2D section, resulting in noise free and spectrally complete synthetic seismometer data. The real vertical component signal is taken as a proxy of the real impingent wavefield, so by convolution and subsequent addition of real ambient noise recorded just before the P-arrival we get synthetic vertical and horizontal component data which very closely match the spectral signal content and signal to noise ratio of this specific recording. When these realistic synthetic data undergo exactly the same receiver function estimation and subsequent graphical display we get a much more realistic image to compare to the real-data receiver functions. We applied this approach to the Central Fjord area in East Greenland (Schiffer et al., 2013), where a 3D velocity model of crust and uppermost mantle was adjusted to receiver functions from 2 years of seismometer recordings and wide angle crustal profiles (Schlindwein and Jokat, 1999; Voss and Jokat, 2007). Computationally this substitutes tens or hundreds of heavy 3D computations with hundreds or thousands of single-core 2D computations which parallelize very efficiently on common multicore systems. In perspective

TMAP-7 simulation of D2 thermal release data from Be co-deposited layers

International Nuclear Information System (INIS)

Baldwin, M.J.; Schwarz-Selinger, T.; Yu, J.H.; Doerner, R.P.

2013-01-01

The efficacy of (1) bake-out at 513 K and 623 K, and (2) thermal transient (10 ms) loading to up to 1000 K, is explored for reducing D inventory in 1 μm thick Be–D (D/Be ∼0.1) co-deposited layers formed at 323 K for experiment (1) and ∼500 K for experiment (2). D release data from co-deposits are obtained by thermal desorption and used to validate a model input into the Tritium Migration and Analysis Program 7 (TMAP). In (1), good agreement with experiment is found for a TMAP model encorporating traps of activation energies, 0.80 eV and 0.98 eV, whereas an additional 2 eV trap was required to model experiment (2). Thermal release is found to be trap limited, but simulations are optimal when surface recombination is taken into account. Results suggest that thick built-up co-deposited layers will hinder ITER inventory control, and that bake periods (∼1 day) will be more effective in inventory reduction than transient thermal loading

TMAP-7 simulation of D2 thermal release data from Be co-deposited layers

Science.gov (United States)

Baldwin, M. J.; Schwarz-Selinger, T.; Yu, J. H.; Doerner, R. P.

2013-07-01

The efficacy of (1) bake-out at 513 K and 623 K, and (2) thermal transient (10 ms) loading to up to 1000 K, is explored for reducing D inventory in 1 μm thick Be-D (D/Be ˜0.1) co-deposited layers formed at 323 K for experiment (1) and ˜500 K for experiment (2). D release data from co-deposits are obtained by thermal desorption and used to validate a model input into the Tritium Migration & Analysis Program 7 (TMAP). In (1), good agreement with experiment is found for a TMAP model encorporating traps of activation energies, 0.80 eV and 0.98 eV, whereas an additional 2 eV trap was required to model experiment (2). Thermal release is found to be trap limited, but simulations are optimal when surface recombination is taken into account. Results suggest that thick built-up co-deposited layers will hinder ITER inventory control, and that bake periods (˜1 day) will be more effective in inventory reduction than transient thermal loading.

Multiple-point statistical simulation for hydrogeological models: 3-D training image development and conditioning strategies

Science.gov (United States)

Høyer, Anne-Sophie; Vignoli, Giulio; Mejer Hansen, Thomas; Thanh Vu, Le; Keefer, Donald A.; Jørgensen, Flemming

2017-12-01

Most studies on the application of geostatistical simulations based on multiple-point statistics (MPS) to hydrogeological modelling focus on relatively fine-scale models and concentrate on the estimation of facies-level structural uncertainty. Much less attention is paid to the use of input data and optimal construction of training images. For instance, even though the training image should capture a set of spatial geological characteristics to guide the simulations, the majority of the research still relies on 2-D or quasi-3-D training images. In the present study, we demonstrate a novel strategy for 3-D MPS modelling characterized by (i) realistic 3-D training images and (ii) an effective workflow for incorporating a diverse group of geological and geophysical data sets. The study covers an area of 2810 km2 in the southern part of Denmark. MPS simulations are performed on a subset of the geological succession (the lower to middle Miocene sediments) which is characterized by relatively uniform structures and dominated by sand and clay. The simulated domain is large and each of the geostatistical realizations contains approximately 45 million voxels with size 100 m × 100 m × 5 m. Data used for the modelling include water well logs, high-resolution seismic data, and a previously published 3-D geological model. We apply a series of different strategies for the simulations based on data quality, and develop a novel method to effectively create observed spatial trends. The training image is constructed as a relatively small 3-D voxel model covering an area of 90 km2. We use an iterative training image development strategy and find that even slight modifications in the training image create significant changes in simulations. Thus, this study shows how to include both the geological environment and the type and quality of input information in order to achieve optimal results from MPS modelling. We present a practical workflow to build the training image and

Production of the excited charm mesons D{sub 1} and D{sup *}{sub 2} at HERA

Energy Technology Data Exchange (ETDEWEB)

Verbytskyi, Andrii

2013-02-15

The production of the excited charm mesons D{sub 1}, D{sup *}{sub 2} and D{sup +}{sub s1} in ep collisions has been measured with the ZEUS detector at Hera. The data sample taken by the ZEUS detector in the years 2003-2007, corresponding to an integrated luminosity of 373 pb{sup -1} has been used. The masses of the neutral, charged and strange states, the widths of the neutral states, the helicity parameters of D{sup 0}{sub 1} and D{sup +}{sub s1} were determined and compared with other measurements and with theoretical expectations. The measured helicity parameters of the D{sup 0}{sub 1} and D{sup +}{sub s1} allows for some mixing of S- and D-waves in their decays to D{sup *{+-}}{pi}{sup -+} and D{sup *{+-}}K{sup 0} respectively. The measured value of the D{sup 0}{sub 1} helicity parameter is also consistent with a pure D-wave decay. Ratios of branching fractions of the two decay modes of the D{sup *0}{sub 2}, D{sup *{+-}}{sub 2} and D{sup +}{sub s1} states were measured and compared with previous measurements. The fractions of charm quarks hadronising into D{sub 1}, D{sup *}{sub 2} and D{sup +}{sub s1} were measured and are consistent with those obtained in e{sup +}e{sup -} annihilations. The Grid computing technology has a high importance for modern High Energy Physics. This technology has been successfully used in Zeus experiment for the MC simulations and data analysis. The dedicated infrastructure has been maintained by the author since 2010. In addition to continuous support, the author has upgraded and improved the performance of the Grid MC simulations and contributed to the Zeus data preservation project.

Modelado de sistemas de visión en 2D y 3D: un enfoque hacia el control de robots manipuladores

Directory of Open Access Journals (Sweden)

Maximiliano Bueno López

2013-09-01

Full Text Available Visual servoing of robot manipulators has been an evolving issue in recent years, especially in applications where the environment is not structured or where access is difficult for operators. To design these controllers, previous simulations are important to adjust parameters or implement a behavioral approach. In this paper we present two different models of vision systems. The models focus on applications in the field of manipulator-robot control. The modeling of video cameras is obtained by using perspective projections. To validate the models, two servo visual controllers in 2D and 3D are simulated.

3D-printed tracheoesophageal puncture and prosthesis placement simulator.

Science.gov (United States)

Barber, Samuel R; Kozin, Elliott D; Naunheim, Matthew R; Sethi, Rosh; Remenschneider, Aaron K; Deschler, Daniel G

A tracheoesophageal prosthesis (TEP) allows for speech after total laryngectomy. However, TEP placement is technically challenging, requiring a coordinated series of steps. Surgical simulators improve technical skills and reduce operative time. We hypothesize that a reusable 3-dimensional (3D)-printed TEP simulator will facilitate comprehension and rehearsal prior to actual procedures. The simulator was designed using Fusion360 (Autodesk, San Rafael, CA). Components were 3D-printed in-house using an Ultimaker 2+ (Ultimaker, Netherlands). Squid simulated the common tracheoesophageal wall. A Blom-Singer TEP (InHealth Technologies, Carpinteria, CA) replicated placement. Subjects watched an instructional video and completed pre- and post-simulation surveys. The simulator comprised 3D-printed parts: the esophageal lumen and superficial stoma. Squid was placed between components. Ten trainees participated. Significant differences existed between junior and senior residents with surveys regarding anatomy knowledge(p<0.05), technical details(p<0.01), and equipment setup(p<0.01). Subjects agreed that simulation felt accurate, and rehearsal raised confidence in future procedures. A 3D-printed TEP simulator is feasible for surgical training. Simulation involving multiple steps may accelerate technical skills and improve education. Copyright © 2017 Elsevier Inc. All rights reserved.

D1+ Simulator: A cost and risk optimized approach to nuclear power plant simulator modernization

International Nuclear Information System (INIS)

Wischert, W.

2006-01-01

D1-Simulator is operated by Kraftwerks-Simulator-Gesellschaft (KSG) and Gesellschaft f?r Simulatorschulung (GfS) at the Simulator Centre in Essen since 1977. The full-scope control room training simulator, used for Kernkraftwerk Biblis (KWB) is based on a PDP-11 hardware platform and is mainly programmed in ASSEMBLER language. The Simulator has reached a continuous high availability of operation throughout the years due to specialized hardware and software support from KSG maintenance team. Nevertheless, D1-Simulator largely reveals limitations with respect to computer capacity and spares and suffers progressively from the non-availability of hardware replacement materials. In order to ensure long term maintainability within the framework of the consensus on nuclear energy, a 2-years refurbishing program has been launched by KWB focusing on quality and budgetary aspects. The so-called D1+ Simulator project is based on the re-use of validated data from existing simulators. Allowing for flexible project management methods, the project outlines a cost and risk optimized approach to Nuclear Power Plant (NPP) Simulator modernization. D1+ Simulator is being built by KSG/GfS in close collaboration with KWB and the simulator vendor THALES by re-using a modern hardware and software development environment from D56-Simulator, used by Kernkraftwerk Obrigheim (KWO) before its decommissioning in 2005. The Simulator project, launched in 2004, is expected to be completed by end of 2006. (author)

2D to 3D transition of polymeric carbon nitride nanosheets

Energy Technology Data Exchange (ETDEWEB)

Chamorro-Posada, Pedro [Dpto. de Teoría de la Señal y Comunicaciones e IT, Universidad de Valladolid, ETSI Telecomunicación, Paseo Belén 15, 47011 Valladolid (Spain); Vázquez-Cabo, José [Dpto. de Teoría de la Señal y Comunicaciones, Universidad de Vigo, ETSI Telecomunicación, Lagoas Marcosende s/n, Vigo (Spain); Sánchez-Arévalo, Francisco M. [Instituto de Investigaciones en Materiales (IIM), Universidad Nacional Autónoma de México, Apdo. Postal 70–360, Cd. Universitaria, México D.F. 04510 (Mexico); Martín-Ramos, Pablo [Dpto. de Teoría de la Señal y Comunicaciones e IT, Universidad de Valladolid, ETSI Telecomunicación, Paseo Belén 15, 47011 Valladolid (Spain); Laboratorio de Materiales Avanzados (Advanced Materials Laboratory) ETSIIAA, Universidad de Valladolid, Avenida de Madrid 44, 34004 Palencia (Spain); Martín-Gil, Jesús; Navas-Gracia, Luis M. [Laboratorio de Materiales Avanzados (Advanced Materials Laboratory) ETSIIAA, Universidad de Valladolid, Avenida de Madrid 44, 34004 Palencia (Spain); Dante, Roberto C., E-mail: rcdante@yahoo.com [Laboratorio de Materiales Avanzados (Advanced Materials Laboratory) ETSIIAA, Universidad de Valladolid, Avenida de Madrid 44, 34004 Palencia (Spain)

2014-11-15

The transition from a prevalent turbostratic arrangement with low planar interactions (2D) to an array of polymeric carbon nitride nanosheets with stronger interplanar interactions (3D), occurring for samples treated above 650 °C, was detected by terahertz-time domain spectroscopy (THz-TDS). The simulated 3D material made of stacks of shifted quasi planar sheets composed of zigzagged polymer ribbons, delivered a XRD simulated pattern in relatively good agreement with the experimental one. The 2D to 3D transition was also supported by the simulation of THz-TDS spectra obtained from quantum chemistry calculations, in which the same broad bands around 2 THz and 1.5 THz were found for 2D and 3D arrays, respectively. This transition was also in accordance with the tightening of the interplanar distance probably due to an interplanar π bond contribution, as evidenced also by a broad absorption around 2.6 eV in the UV–vis spectrum, which appeared in the sample treated at 650 °C, and increased in the sample treated at 700 °C. The band gap was calculated for 1D and 2D cases. The value of 3.374 eV for the 2D case is, within the model accuracy and precision, in a relative good agreement with the value of 3.055 eV obtained from the experimental results. - Graphical abstract: 2D lattice mode vibrations and structural changes correlated with the so called “2D to 3D transition”. - Highlights: • A 2D to 3D transition has been detected for polymeric carbon nitride. • THz-TDS allowed us to discover and detect the 2D to 3D transition of polymeric carbon nitride. • We propose a structure for polymeric carbon nitride confirming it with THz-TDS.

2D to 3D transition of polymeric carbon nitride nanosheets

International Nuclear Information System (INIS)

Chamorro-Posada, Pedro; Vázquez-Cabo, José; Sánchez-Arévalo, Francisco M.; Martín-Ramos, Pablo; Martín-Gil, Jesús; Navas-Gracia, Luis M.; Dante, Roberto C.

2014-01-01

The transition from a prevalent turbostratic arrangement with low planar interactions (2D) to an array of polymeric carbon nitride nanosheets with stronger interplanar interactions (3D), occurring for samples treated above 650 °C, was detected by terahertz-time domain spectroscopy (THz-TDS). The simulated 3D material made of stacks of shifted quasi planar sheets composed of zigzagged polymer ribbons, delivered a XRD simulated pattern in relatively good agreement with the experimental one. The 2D to 3D transition was also supported by the simulation of THz-TDS spectra obtained from quantum chemistry calculations, in which the same broad bands around 2 THz and 1.5 THz were found for 2D and 3D arrays, respectively. This transition was also in accordance with the tightening of the interplanar distance probably due to an interplanar π bond contribution, as evidenced also by a broad absorption around 2.6 eV in the UV–vis spectrum, which appeared in the sample treated at 650 °C, and increased in the sample treated at 700 °C. The band gap was calculated for 1D and 2D cases. The value of 3.374 eV for the 2D case is, within the model accuracy and precision, in a relative good agreement with the value of 3.055 eV obtained from the experimental results. - Graphical abstract: 2D lattice mode vibrations and structural changes correlated with the so called “2D to 3D transition”. - Highlights: • A 2D to 3D transition has been detected for polymeric carbon nitride. • THz-TDS allowed us to discover and detect the 2D to 3D transition of polymeric carbon nitride. • We propose a structure for polymeric carbon nitride confirming it with THz-TDS

Fast 2D hybrid fluid-analytical simulation of inductive/capacitive discharges

International Nuclear Information System (INIS)

Kawamura, E; Lieberman, M A; Graves, D B

2011-01-01

A fast two-dimensional (2D) hybrid fluid-analytical transform coupled plasma reactor model was developed using the finite elements simulation tool COMSOL. Both inductive and capacitive coupling of the source coils to the plasma are included in the model, as well as a capacitive bias option for the wafer electrode. A bulk fluid plasma model, which solves the time-dependent plasma fluid equations for the ion continuity and electron energy balance, is coupled with an analytical sheath model. The vacuum sheath of variable thickness is modeled with a fixed-width sheath of variable dielectric constant. The sheath heating is treated as an incoming heat flux at the plasma-sheath boundary, and a dissipative term is added to the sheath dielectric constant. A gas flow model solves for the steady-state pressure, temperature and velocity of the neutrals. The simulation results, over a range of input powers, are in good agreement with a chlorine reactor experimental study.

Numerical simulation of the time-dependent deformation behaviour of clay-stone rock mass at the Tournemire site with 2D and 3D models

International Nuclear Information System (INIS)

Rutenberg, M.; Lux, K. H.

2011-01-01

Clay-stone rock masses are a reasonable alternative to e.g. salt rock masses as a host rock for underground radioactive waste repositories because of their very low permeability as well as their radionuclide retention capacity. Though clay-stone has been explored for many years, there is still a need for further research on its hydro-mechanical behaviour. Convergence measurements over a 4-year period in the tunnel system of the argillaceous Tournemire site in France yielded the presence of a time-dependent deformation behaviour in indurated clay. Moreover, a mine-by test was carried out with extensometer measurements capturing the rock mass deformation during the excavation process of a new gallery in 2003.This work focuses on the validation of a constitutive model by means of a three-dimensional (3D) simulation of the mine-by test. The utilised constitutive model Hou/Lux-T is based on the viscous constitutive model Lubby2 with which time-dependent deformation behaviour of salt rock can appropriately be simulated. It has been adapted to clay-stone by considering anisotropy effects, and in addition it features a strain-dependent fracture and failure criterion. The results of the mine-by-test simulation show that the calculated stresses and deformations in the rock mass seem to behave reasonably under this constitutive model with respect to time-dependency. A comparison of the 3D results to the results of a simplified two-dimensional (2D) simulation confirms the adequacy of using a 2D model with the constitutive model Hou/Lux-T for the setting at hand, described in the text (material parameters, time scale), in order to assess load-bearing capacity and deformability of the gallery near field away from heading face and tunnel crossing. Finally, a comparison of the 3D simulation results to the extensometer measurement results yields the principal ability of the used constitutive model to describe time-dependent evolutions of stresses and deformations during a three

The evaluation/application of Hydrus-2D model for simulating macro-pores flow in loess soil

OpenAIRE

Xuexuan Xu; Shahmir Ali Kalhoro; Wen yuan Chen; Sajjad Raza

2017-01-01

Soil hydraulic properties were mainly governed by soil structures especially when the structures is full of the connected soil macro-pores. Therefore, the good hydrological models need to be well documented for revealing the process of soil water movement affected by soil medium. The Hydrus-2D model with double domain was recommended in simulating water movement in a heterogeneous medium of soil. To evaluate the performance of the double domain Hydrus-2D model in loess soil, the dynamic of so...

Development of 3D dynamic gap element for simulation of asymmetric fuel behavior

International Nuclear Information System (INIS)

Kim, Hyochan; Yang, Yongsik; Koo, Yanghyun; Kang, Changhak; Lee, Sunguk; Yang, Dongyol

2014-01-01

The accurate modeling of heat transfer across the gap between fuel pellets and the protective cladding is essential to understanding the fuel performance, including cladding stress and behavior under irradiated conditions. To establish a heat transfer model through a gap in the fuel performance code, the gap conductance based on the Ross and Stoute model was employed in most previous works. In this model, the gap conductance that determines the temperature gradient within the gap is a function of gap thickness, which is dependent on mechanical behavior. Recently, many researchers have been developing fuel performance codes based on the finite element method (FE) to calculate the temperature, stress, and strain in 2D or 3D. The gap conductance model for FE can be a challenging issue in terms of convergence and nonlinearity because the elements that are positioned in a gap have a different gap conductance, and the boundary conditions of the gap vary at each iteration step. In this paper, the specified 3D dynamic gap element has been proposed and implemented to simulate asymmetric thermo-mechanical fuel behavior. A thermo-mechanical 3D finite element module incorporating a gap element has been implemented using FORTRAN77. To evaluate the proposed 3D gap element, the missing pellet surface (MPS), which results in an asymmetric heat transfer in the pellet and cladding, was simulated. As a result, the maximum temperature of a pellet for the MPS problem calculated with the specified 3D gap element is much higher than the temperature calculated with a uniform gap conductance model that a multidimensional fuel performance code employs. The results demonstrate that a 3D simulation is essential to evaluate the temperature and stress of the pellet and cladding for an asymmetric geometry simulation. (author)

FEM-2D - Input description and performance

International Nuclear Information System (INIS)

Schmidt, F.A.R.

1975-03-01

FEM-2D solves the 2d diffusion equation by the Finite Element Method. This version of the code was written for x-y geometry, triangular elements with first and second order flux approximations, and has a solution routine which is based on a modified Cholesky procedure. FEM-2D is fully integrated into the modular system RSYST. However, we have developed a simulation program RSIMK which simulates some of the functions of RSYST and allows to run FEM-2D independently. (orig.) [de

Adding a dimension to the infrared spectra of interfaces using heterodyne detected 2D sum-frequency generation (HD 2D SFG) spectroscopy.

Science.gov (United States)

Xiong, Wei; Laaser, Jennifer E; Mehlenbacher, Randy D; Zanni, Martin T

2011-12-27

In the last ten years, two-dimensional infrared spectroscopy has become an important technique for studying molecular structures and dynamics. We report the implementation of heterodyne detected two-dimensional sum-frequency generation (HD 2D SFG) spectroscopy, which is the analog of 2D infrared (2D IR) spectroscopy, but is selective to noncentrosymmetric systems such as interfaces. We implement the technique using mid-IR pulse shaping, which enables rapid scanning, phase cycling, and automatic phasing. Absorptive spectra are obtained, that have the highest frequency resolution possible, from which we extract the rephasing and nonrephasing signals that are sometimes preferred. Using this technique, we measure the vibrational mode of CO adsorbed on a polycrystalline Pt surface. The 2D spectrum reveals a significant inhomogenous contribution to the spectral line shape, which is quantified by simulations. This observation indicates that the surface conformation and environment of CO molecules is more complicated than the simple "atop" configuration assumed in previous work. Our method can be straightforwardly incorporated into many existing SFG spectrometers. The technique enables one to quantify inhomogeneity, vibrational couplings, spectral diffusion, chemical exchange, and many other properties analogous to 2D IR spectroscopy, but specifically for interfaces.

24,25,28-Trihydroxyvitamin D2 and 24,25,26-trihydroxyvitamin D2: Novel metabolites of vitamin D2

International Nuclear Information System (INIS)

Reddy, G.S.; Tserng, K.

1990-01-01

Understanding of the inactivation pathways of 25-hydroxyvitamin D 2 and 24-hydroxyvitamin D 2 , the two physiologically significant monohydroxylated metabolites of vitamin D 2 , is of importance, especially during hypervitaminosis D 2 . At present, little information is available regarding the inactivation pathway of 25-hydroxyvitamin D 2 except its further metabolism into 24,25-dihydroxyvitamin D 2 . In our present study, the authors investigated the metabolic fate of 25-hydroxyvitamin D 2 in the isolated perfused rat kidney and demonstrated its conversion not only into 24,25-dihydroxyvitamin D 2 but also into two other new metabolites, namely, 24,25,28-trihydroxyvitamin D 2 and 24,25,26-trihydroxyvitamin D 2 . The structure identification of the new metabolites was established by the techniques of ultraviolet absorption spectrophotometry and mass spectrometry and by the characteristic nature of each new metabolite's susceptibility to sodium metaperiodate oxidation. In order to demonstrate the physiological significance of the two new trihydroxy metabolites of vitamin D 2 , induced hypervitaminosis D 2 in a rat using [3α- 3 H]vitamin D 2 and analyzed its plasma for the various [3α- 3 H]vitamin D 2 metabolites on two different high-pressure liquid chromatography systems. The results indicate that both 24,25,26-trihydroxyvitamin D 2 and 24,25,26-trihydroxyvitamin D 2 circulate in the vitamin D 2 intoxicated rat in significant amounts along with other previously identified monohydroxy and dihydroxy metabolites of vitamin D 2 , namely, 24-hydroxyvitamin D 2 , 25-hydroxyvitamin D 2 , and 24,25-dihydroxyvitamin D 2

PERICLES 2D experiment

International Nuclear Information System (INIS)

Morel, Christophe

2001-01-01

Scope of the lecture was the modelling of severe reactor accidents. The PERICLES 2D experiment was compared to CATHARE 3D simulation results considering progression of a quench front inside the reactor core, steam flow rates, heat conduction, cladding temperature. (uke)

TMAP-7 simulation of D{sub 2} thermal release data from Be co-deposited layers

Energy Technology Data Exchange (ETDEWEB)

Baldwin, M.J., E-mail: mbaldwin@ferp.ucsd.edu [Center for Energy Research, University of California at San Diego, La Jolla, CA 92093-0417 (United States); Schwarz-Selinger, T. [Max-Planck-Institut für Plasmaphysik, EURATOM Association, Boltzmannstrasse 2, 85748 Garching (Germany); Yu, J.H. [Center for Energy Research, University of California at San Diego, La Jolla, CA 92093-0417 (United States); Doerner, R.P., E-mail: rdoerner@ucsd.edu [Center for Energy Research, University of California at San Diego, La Jolla, CA 92093-0417 (United States)

2013-07-15

The efficacy of (1) bake-out at 513 K and 623 K, and (2) thermal transient (10 ms) loading to up to 1000 K, is explored for reducing D inventory in 1 μm thick Be–D (D/Be ∼0.1) co-deposited layers formed at 323 K for experiment (1) and ∼500 K for experiment (2). D release data from co-deposits are obtained by thermal desorption and used to validate a model input into the Tritium Migration and Analysis Program 7 (TMAP). In (1), good agreement with experiment is found for a TMAP model encorporating traps of activation energies, 0.80 eV and 0.98 eV, whereas an additional 2 eV trap was required to model experiment (2). Thermal release is found to be trap limited, but simulations are optimal when surface recombination is taken into account. Results suggest that thick built-up co-deposited layers will hinder ITER inventory control, and that bake periods (∼1 day) will be more effective in inventory reduction than transient thermal loading.

Microbial Enhanced Oil Recovery: 3D Simulation with Gravity Effects

DEFF Research Database (Denmark)

Nielsen, Sidsel Marie; Jessen, K.; Shapiro, Alexander

2010-01-01

Microbial enhanced oil recovery (MEOR) utilizes the activity of microorganisms, where microorganisms simultaneously grow in a reservoir and convert substrate into recovery enhancing products (usually, surfactants). In order to predict the performance of a MEOR process, a simulation tool is required...... using an operator splitting technique. To the best of our knowledge, this has resulted in the first full 3D MEOR streamline simulator. For verification purposes, we compare results from our streamline MEOR simulator to those of a conventional finite difference approach for 1D and 2D displacement...

Realistic Vendor-Specific Synthetic Ultrasound Data for Quality Assurance of 2-D Speckle Tracking Echocardiography: Simulation Pipeline and Open Access Database.

Science.gov (United States)

Alessandrini, Martino; Chakraborty, Bidisha; Heyde, Brecht; Bernard, Olivier; De Craene, Mathieu; Sermesant, Maxime; D'Hooge, Jan

2018-03-01

Two-dimensional (2-D) echocardiography is the modality of choice in the clinic for the diagnosis of cardiac disease. Hereto, speckle tracking (ST) packages complement visual assessment by the cardiologist by providing quantitative diagnostic markers of global and regional cardiac function (e.g., displacement, strain, and strain-rate). Yet, the reported high vendor-dependence between the outputs of different ST packages raises clinical concern and hampers the widespread dissemination of the ST technology. In part, this is due to the lack of a solid commonly accepted quality assurance pipeline for ST packages. Recently, we have developed a framework to benchmark ST algorithms for 3-D echocardiography by using realistic simulated volumetric echocardiographic recordings. Yet, 3-D echocardiography remains an emerging technology, whereas the compelling clinical concern is, so far, directed to the standardization of 2-D ST only. Therefore, by building upon our previous work, we present in this paper a pipeline to generate realistic synthetic sequences for 2-D ST algorithms. Hereto, the synthetic cardiac motion is obtained from a complex electromechanical heart model, whereas realistic vendor-specific texture is obtained by sampling a real clinical ultrasound recording. By modifying the parameters in our pipeline, we generated an open-access library of 105 synthetic sequences encompassing: 1) healthy and ischemic motion patterns; 2) the most common apical probe orientations; and 3) vendor-specific image quality from seven different systems. Ground truth deformation is also provided to allow performance analysis. The application of the provided data set is also demonstrated in the benchmarking of a recent academic ST algorithm.

Simulating SiD Calorimetry: Software Calibration Procedures and Jet Energy Resolution

International Nuclear Information System (INIS)

Cassell, R.

2009-01-01

Simulated calorimeter performance in the SiD detector is examined. The software calibration procedures are described, as well as the perfect pattern recognition PFA reconstruction. Performance of the SiD calorimeters is summarized with jet energy resolutions from calorimetry only, perfect pattern recognition and the SiD PFA algorithm. Presented at LCWS08(1). Our objective is to simulate the calorimeter performance of the SiD detector, with and without a Particle Flow Algorithm (PFA). Full Geant4 simulations using SLIC(2) and the SiD simplified detector geometry (SiD02) are used. In this geometry, the calorimeters are represented as layered cylinders. The EM calorimeter is Si/W, with 20 layers of 2.5mm W and 10 layers of 5mm W, segmented in 3.5 x 3.5mm 2 cells. The HAD calorimeter is RPC/Fe, with 40 layers of 20mm Fe and a digital readout, segmented in 10 x 10mm 2 cells. The barrel detectors are layered in radius, while the endcap detectors are layered in z(along the beam axis)

Study of the adaptive refinement on an open source 2D shallow-water flow solver using quadtree grid for flash flood simulations.

Science.gov (United States)

Kirstetter, G.; Popinet, S.; Fullana, J. M.; Lagrée, P. Y.; Josserand, C.

2015-12-01

The full resolution of shallow-water equations for modeling flash floods may have a high computational cost, so that majority of flood simulation softwares used for flood forecasting uses a simplification of this model : 1D approximations, diffusive or kinematic wave approximations or exotic models using non-physical free parameters. These kind of approximations permit to save a lot of computational time by sacrificing in an unquantified way the precision of simulations. To reduce drastically the cost of such 2D simulations by quantifying the lost of precision, we propose a 2D shallow-water flow solver built with the open source code Basilisk1, which is using adaptive refinement on a quadtree grid. This solver uses a well-balanced central-upwind scheme, which is at second order in time and space, and treats the friction and rain terms implicitly in finite volume approach. We demonstrate the validity of our simulation on the case of the flood of Tewkesbury (UK) occurred in July 2007, as shown on Fig. 1. On this case, a systematic study of the impact of the chosen criterium for adaptive refinement is performed. The criterium which has the best computational time / precision ratio is proposed. Finally, we present the power law giving the computational time in respect to the maximum resolution and we show that this law for our 2D simulation is close to the one of 1D simulation, thanks to the fractal dimension of the topography. [1] http://basilisk.fr/

Low-resolution simulations of vesicle suspensions in 2D

Science.gov (United States)

Kabacaoğlu, Gökberk; Quaife, Bryan; Biros, George

2018-03-01

Vesicle suspensions appear in many biological and industrial applications. These suspensions are characterized by rich and complex dynamics of vesicles due to their interaction with the bulk fluid, and their large deformations and nonlinear elastic properties. Many existing state-of-the-art numerical schemes can resolve such complex vesicle flows. However, even when using provably optimal algorithms, these simulations can be computationally expensive, especially for suspensions with a large number of vesicles. These high computational costs can limit the use of simulations for parameter exploration, optimization, or uncertainty quantification. One way to reduce the cost is to use low-resolution discretizations in space and time. However, it is well-known that simply reducing the resolution results in vesicle collisions, numerical instabilities, and often in erroneous results. In this paper, we investigate the effect of a number of algorithmic empirical fixes (which are commonly used by many groups) in an attempt to make low-resolution simulations more stable and more predictive. Based on our empirical studies for a number of flow configurations, we propose a scheme that attempts to integrate these fixes in a systematic way. This low-resolution scheme is an extension of our previous work [51,53]. Our low-resolution correction algorithms (LRCA) include anti-aliasing and membrane reparametrization for avoiding spurious oscillations in vesicles' membranes, adaptive time stepping and a repulsion force for handling vesicle collisions and, correction of vesicles' area and arc-length for maintaining physical vesicle shapes. We perform a systematic error analysis by comparing the low-resolution simulations of dilute and dense suspensions with their high-fidelity, fully resolved, counterparts. We observe that the LRCA enables both efficient and statistically accurate low-resolution simulations of vesicle suspensions, while it can be 10× to 100× faster.

Offensive Strategy in the 2D Soccer Simulation League Using Multi-Group Ant Colony Optimization

Directory of Open Access Journals (Sweden)

Shengbing Chen

2016-02-01

Full Text Available The 2D soccer simulation league is one of the best test beds for the research of artificial intelligence (AI. It has achieved great successes in the domain of multi-agent cooperation and machine learning. However, the problem of integral offensive strategy has not been solved because of the dynamic and unpredictable nature of the environment. In this paper, we present a novel offensive strategy based on multi-group ant colony optimization (MACO-OS. The strategy uses the pheromone evaporation mechanism to count the preference value of each attack action in different environments, and saves the values of success rate and preference in an attack information tree in the background. The decision module of the attacker then selects the best attack action according to the preference value. The MACO-OS approach has been successfully implemented in our 2D soccer simulation team in RoboCup competitions. The experimental results have indicated that the agents developed with this strategy, along with related techniques, delivered outstanding performances.

ATHENA2D, Simulation Hypothetical Recriticality Accident in a Thermal Neutron Spectrum

International Nuclear Information System (INIS)

1999-01-01

1 - Description of program or function: ATHENA 2 D was written to simulate a hypothetical water reflood of a highly-damaged light water reactor (such as the Three-Mile-Island Unit-2 after meltdown, with a packed debris bed near the center of the core), but with insufficiently-borated reflood water. A recriticality transient may result because of the potentially more reactive debris bed. ATHENA-2D solves the transient multigroup neutron diffusion equations in (r,z) geometry. Executing in parallel with the transient neutronics, is a single-phase computational fluid dynamics (CFD) model, driven by multichannel thermal hydraulics based on detailed pin models. Numerous PV-Wave procedure files are included on the distribution media, useful for those who already have PV-Wave from Visual Numerics. These procedures are documented in the 'README' files included on the distribution CD. Some reactor lattice computer code such as WIMS-E, CCC-576/WIMSD4, or CCC-656/WIMSD5B is required for the creation of macroscopic cross section libraries, given pin-cell geometries. WIMS-E is a commercial product available from AEA Technologies, England, WIMS is not included on the ATHENA 2 D distribution CD. Several auxiliary routines are included in the package. TFMAX: Utility that searches through ATHENA 2 D binary output to find the maximum fuel temperature over space and time. POST V EL: Utility that searches through ATHENA 2 D binary output to find maximum scalar and flow field values (over space) and outputs normalization factors as a function of time. These results are used to correctly scale animations. CONVT: If executing ATHENA 2 D on a PC under Windows, this utility converts one form of binary output (directly from ATHENA 2 D) to another, which is readable by PV-Wave for Windows (PV-Wave is data animation and visualization software from Visual Numerics, Inc.) CALC M TX: Post-processing utility for calculating the model coefficients for the calculation matrix. 2 - Methods: Both the

Blockchain-Empowered Fair Computational Resource Sharing System in the D2D Network

Directory of Open Access Journals (Sweden)

Zhen Hong

2017-11-01

Full Text Available Device-to-device (D2D communication is becoming an increasingly important technology in future networks with the climbing demand for local services. For instance, resource sharing in the D2D network features ubiquitous availability, flexibility, low latency and low cost. However, these features also bring along challenges when building a satisfactory resource sharing system in the D2D network. Specifically, user mobility is one of the top concerns for designing a cooperative D2D computational resource sharing system since mutual communication may not be stably available due to user mobility. A previous endeavour has demonstrated and proven how connectivity can be incorporated into cooperative task scheduling among users in the D2D network to effectively lower average task execution time. There are doubts about whether this type of task scheduling scheme, though effective, presents fairness among users. In other words, it can be unfair for users who contribute many computational resources while receiving little when in need. In this paper, we propose a novel blockchain-based credit system that can be incorporated into the connectivity-aware task scheduling scheme to enforce fairness among users in the D2D network. Users’ computational task cooperation will be recorded on the public blockchain ledger in the system as transactions, and each user’s credit balance can be easily accessible from the ledger. A supernode at the base station is responsible for scheduling cooperative computational tasks based on user mobility and user credit balance. We investigated the performance of the credit system, and simulation results showed that with a minor sacrifice of average task execution time, the level of fairness can obtain a major enhancement.

Enhanced job control language procedures for the SIMSYS2D two-dimensional water-quality simulation system

Science.gov (United States)

Karavitis, G.A.

1984-01-01

The SIMSYS2D two-dimensional water-quality simulation system is a large-scale digital modeling software system used to simulate flow and transport of solutes in freshwater and estuarine environments. Due to the size, processing requirements, and complexity of the system, there is a need to easily move the system and its associated files between computer sites when required. A series of job control language (JCL) procedures was written to allow transferability between IBM and IBM-compatible computers. (USGS)

Electron acceleration in the Solar corona - 3D PiC code simulations of guide field reconnection

Science.gov (United States)

Alejandro Munoz Sepulveda, Patricio

2017-04-01

The efficient electron acceleration in the solar corona detected by means of hard X-ray emission is still not well understood. Magnetic reconnection through current sheets is one of the proposed production mechanisms of non-thermal electrons in solar flares. Previous works in this direction were based mostly on test particle calculations or 2D fully-kinetic PiC simulations. We have now studied the consequences of self-generated current-aligned instabilities on the electron acceleration mechanisms by 3D magnetic reconnection. For this sake, we carried out 3D Particle-in-Cell (PiC) code numerical simulations of force free reconnecting current sheets, appropriate for the description of the solar coronal plasmas. We find an efficient electron energization, evidenced by the formation of a non-thermal power-law tail with a hard spectral index smaller than -2 in the electron energy distribution function. We discuss and compare the influence of the parallel electric field versus the curvature and gradient drifts in the guiding-center approximation on the overall acceleration, and their dependence on different plasma parameters.

High performance shallow water kernels for parallel overland flow simulations based on FullSWOF2D

KAUST Repository

Wittmann, Roland

2017-01-25

We describe code optimization and parallelization procedures applied to the sequential overland flow solver FullSWOF2D. Major difficulties when simulating overland flows comprise dealing with high resolution datasets of large scale areas which either cannot be computed on a single node either due to limited amount of memory or due to too many (time step) iterations resulting from the CFL condition. We address these issues in terms of two major contributions. First, we demonstrate a generic step-by-step transformation of the second order finite volume scheme in FullSWOF2D towards MPI parallelization. Second, the computational kernels are optimized by the use of templates and a portable vectorization approach. We discuss the load imbalance of the flux computation due to dry and wet cells and propose a solution using an efficient cell counting approach. Finally, scalability results are shown for different test scenarios along with a flood simulation benchmark using the Shaheen II supercomputer.

Plane-dependent ML scatter scaling: 3D extension of the 2D simulated single scatter (SSS) estimate

Science.gov (United States)

Rezaei, Ahmadreza; Salvo, Koen; Vahle, Thomas; Panin, Vladimir; Casey, Michael; Boada, Fernando; Defrise, Michel; Nuyts, Johan

2017-08-01

Scatter correction is typically done using a simulation of the single scatter, which is then scaled to account for multiple scatters and other possible model mismatches. This scaling factor is determined by fitting the simulated scatter sinogram to the measured sinogram, using only counts measured along LORs that do not intersect the patient body, i.e. ‘scatter-tails’. Extending previous work, we propose to scale the scatter with a plane dependent factor, which is determined as an additional unknown in the maximum likelihood (ML) reconstructions, using counts in the entire sinogram rather than only the ‘scatter-tails’. The ML-scaled scatter estimates are validated using a Monte-Carlo simulation of a NEMA-like phantom, a phantom scan with typical contrast ratios of a 68Ga-PSMA scan, and 23 whole-body 18F-FDG patient scans. On average, we observe a 12.2% change in the total amount of tracer activity of the MLEM reconstructions of our whole-body patient database when the proposed ML scatter scales are used. Furthermore, reconstructions using the ML-scaled scatter estimates are found to eliminate the typical ‘halo’ artifacts that are often observed in the vicinity of high focal uptake regions.

The preliminary 3D dynamic simulation on the RSR dismantling process of the KRR-1 and 2

International Nuclear Information System (INIS)

Kim, Hee-Reyoung; Kim, Sung-Kyun; Seo, Bum-Kyoung; Lee, Kune-Woo; Park, Jin-Ho

2003-01-01

A three-dimensional graphic simulation has been carried out for the dismantling process of the Rotary Specimen Rack(RSR) in the Korea Research Reactor-1 and 2 (KRR-1 and 2). First of all, the general steps of the graphic simulation were established and reviewed for the dismantling process of the object. Four dismantling processes, which are the removal of RSR, reactor core region, beam tube, and thermal column and activated concrete, were selected for the graphic simulation on the virtual space by the consideration of the activation, worker training, work difficulty and so on. In the present study, the dismantling procedure of the RSR was divided into several steps and its visual simulation was performed by the 3D graphic software. Finally, the simulation result was converted to moving file with extension of AVI so that easy approach can be made on window OS system

GMC COLLISIONS AS TRIGGERS OF STAR FORMATION. I. PARAMETER SPACE EXPLORATION WITH 2D SIMULATIONS

Energy Technology Data Exchange (ETDEWEB)

Wu, Benjamin [Department of Physics, University of Florida, Gainesville, FL 32611 (United States); Loo, Sven Van [School of Physics and Astronomy, University of Leeds, Leeds LS2 9JT (United Kingdom); Tan, Jonathan C. [Departments of Astronomy and Physics, University of Florida, Gainesville, FL 32611 (United States); Bruderer, Simon, E-mail: benwu@phys.ufl.edu [Max Planck Institute for Extraterrestrial Physics, Giessenbachstrasse 1, D-85748 Garching (Germany)

2015-09-20

We utilize magnetohydrodynamic (MHD) simulations to develop a numerical model for giant molecular cloud (GMC)–GMC collisions between nearly magnetically critical clouds. The goal is to determine if, and under what circumstances, cloud collisions can cause pre-existing magnetically subcritical clumps to become supercritical and undergo gravitational collapse. We first develop and implement new photodissociation region based heating and cooling functions that span the atomic to molecular transition, creating a multiphase ISM and allowing modeling of non-equilibrium temperature structures. Then in 2D and with ideal MHD, we explore a wide parameter space of magnetic field strength, magnetic field geometry, collision velocity, and impact parameter and compare isolated versus colliding clouds. We find factors of ∼2–3 increase in mean clump density from typical collisions, with strong dependence on collision velocity and magnetic field strength, but ultimately limited by flux-freezing in 2D geometries. For geometries enabling flow along magnetic field lines, greater degrees of collapse are seen. We discuss observational diagnostics of cloud collisions, focussing on {sup 13}CO(J = 2–1), {sup 13}CO(J = 3–2), and {sup 12}CO(J = 8–7) integrated intensity maps and spectra, which we synthesize from our simulation outputs. We find that the ratio of J = 8–7 to lower-J emission is a powerful diagnostic probe of GMC collisions.

[3D Virtual Reality Laparoscopic Simulation in Surgical Education - Results of a Pilot Study].

Science.gov (United States)

Kneist, W; Huber, T; Paschold, M; Lang, H

2016-06-01

The use of three-dimensional imaging in laparoscopy is a growing issue and has led to 3D systems in laparoscopic simulation. Studies on box trainers have shown differing results concerning the benefit of 3D imaging. There are currently no studies analysing 3D imaging in virtual reality laparoscopy (VRL). Five surgical fellows, 10 surgical residents and 29 undergraduate medical students performed abstract and procedural tasks on a VRL simulator using conventional 2D and 3D imaging in a randomised order. No significant differences between the two imaging systems were shown for students or medical professionals. Participants who preferred three-dimensional imaging showed significantly better results in 2D as wells as in 3D imaging. First results on three-dimensional imaging on box trainers showed different results. Some studies resulted in an advantage of 3D imaging for laparoscopic novices. This study did not confirm the superiority of 3D imaging over conventional 2D imaging in a VRL simulator. In the present study on 3D imaging on a VRL simulator there was no significant advantage for 3D imaging compared to conventional 2D imaging. Georg Thieme Verlag KG Stuttgart · New York.

Cocaine-induced adaptation of dopamine D2S, but not D2L autoreceptors.

Science.gov (United States)

Robinson, Brooks G; Condon, Alec F; Radl, Daniela; Borrelli, Emiliana; Williams, John T; Neve, Kim A

2017-11-20

The dopamine D2 receptor has two splice variants, D2S (Short) and D2L (Long). In dopamine neurons, both variants can act as autoreceptors to regulate neuronal excitability and dopamine release, but the roles of each variant are incompletely characterized. In a previous study we used viral receptor expression in D2 receptor knockout mice to show distinct effects of calcium signaling on D2S and D2L autoreceptor function (Gantz et al., 2015). However, the cocaine-induced plasticity of D2 receptor desensitization observed in wild type mice was not recapitulated with this method of receptor expression. Here we use mice with genetic knockouts of either the D2S or D2L variant to investigate cocaine-induced plasticity in D2 receptor signaling. Following a single in vivo cocaine exposure, the desensitization of D2 receptors from neurons expressing only the D2S variant was reduced. This did not occur in D2L-expressing neurons, indicating differential drug-induced plasticity between the variants.

Simulation of Flow, Sediment Transport, and Sediment Mobility of the Lower Coeur d'Alene River, Idaho

Science.gov (United States)

Berenbrock, Charles; Tranmer, Andrew W.

2008-01-01

A one-dimensional sediment-transport model and a multi-dimensional hydraulic and bed shear stress model were developed to investigate the hydraulic, sediment transport, and sediment mobility characteristics of the lower Coeur d?Alene River in northern Idaho. This report documents the development and calibration of those models, as well as the results of model simulations. The one-dimensional sediment-transport model (HEC-6) was developed, calibrated, and used to simulate flow hydraulics and erosion, deposition, and transport of sediment in the lower Coeur d?Alene River. The HEC-6 modeled reach, comprised of 234 cross sections, extends from Enaville, Idaho, on the North Fork of the Coeur d?Alene River and near Pinehurst, Idaho, on the South Fork of the river to near Harrison, Idaho, on the main stem of the river. Bed-sediment samples collected by previous investigators and samples collected for this study in 2005 were used in the model. Sediment discharge curves from a previous study were updated using suspended-sediment samples collected at three sites since April 2000. The HEC-6 was calibrated using river discharge and water-surface elevations measured at five U.S. Geological Survey gaging stations. The calibrated HEC-6 model allowed simulation of management alternatives to assess erosion and deposition from proposed dredging of contaminated streambed sediments in the Dudley reach. Four management alternatives were simulated with HEC-6. Before the start of simulation for these alternatives, seven cross sections in the reach near Dudley, Idaho, were deepened 20 feet?removing about 296,000 cubic yards of sediments?to simulate dredging. Management alternative 1 simulated stage-discharge conditions from 2000, and alternative 2 simulated conditions from 1997. Results from alternatives 1 and 2 indicated that about 6,500 and 12,300 cubic yards, respectively, were deposited in the dredged reach. These figures represent 2 and 4 percent, respectively, of the total volume of

1H NMR study of 2-deoxy-D-arabino-hexopyranose (2-deoxy-glucopyranose), 2-deoxy-D-lyxo-hexopyranose (2-deoxy-galactopyranose) and 2'-deoxy lactose

International Nuclear Information System (INIS)

Bruyn, A. de; Anteunis, M.

1975-01-01

Complete analyses of the 1 H n.m.r. spectra at 300 MHz of D 2 O solutions of 2-deoxy-D-arabino-hexopyranose, 2-deoxy-D-lyxo-hexopyranose and 2'-deoxy lactose. Chemical shifts in the deoxy monosaccharides and in 2'-deoxy lactose. Chemical shifts in the deoxy monosaccharides and in 2'-deoxy lactose are compared with those previously obtained in the parent aldeohexopyranoses, glucobioses and D-galactopyranosol-D-glucoses. Increment values are suggested in order to predict chemical shifts in 2-deoxy derivatives from the well known rules for aldohexopyranoses. (author)

Numerical Simulation of the Effect of 3D Needle Movement on Cavitation and Spray Formation in a Diesel Injector

Science.gov (United States)

Mandumpala Devassy, B.; Edelbauer, W.; Greif, D.

2015-12-01

Cavitation and its effect on spray formation and its dispersion play a crucial role in proper engine combustion and controlled emission. This study focuses on these effects in a typical common rail 6-hole diesel injector accounting for 3D needle movement and flow compressibility effects. Coupled numerical simulations using 1D and 3D CFD codes are used for this investigation. Previous studies in this direction have already presented a detailed structure of the adopted methodology. Compared to the previous analysis, the present study investigates the effect of 3D needle movement and cavitation on the spray formation for pilot and main injection events for a typical diesel engine operating point. The present setup performs a 3D compressible multiphase simulation coupled with a standalone 1D high pressure flow simulation. The simulation proceeds by the mutual communication between 1D and 3D solvers. In this work a typical common rail injector with a mini-sac nozzle is studied. The lateral and radial movement of the needle and its effect on the cavitation generation and the subsequent spray penetration are analyzed. The result indicates the effect of compressibility of the liquid on damping the needle forces, and also the difference in the spray penetration levels due to the asymmetrical flow field. Therefore, this work intends to provide an efficient and user-friendly engineering tool for simulating a complete fuel injector including spray propagation.

Numerical Simulation of the Effect of 3D Needle Movement on Cavitation and Spray Formation in a Diesel Injector

International Nuclear Information System (INIS)

Devassy, B Mandumpala; Edelbauer, W; Greif, D

2015-01-01

Cavitation and its effect on spray formation and its dispersion play a crucial role in proper engine combustion and controlled emission. This study focuses on these effects in a typical common rail 6-hole diesel injector accounting for 3D needle movement and flow compressibility effects. Coupled numerical simulations using 1D and 3D CFD codes are used for this investigation. Previous studies in this direction have already presented a detailed structure of the adopted methodology. Compared to the previous analysis, the present study investigates the effect of 3D needle movement and cavitation on the spray formation for pilot and main injection events for a typical diesel engine operating point. The present setup performs a 3D compressible multiphase simulation coupled with a standalone 1D high pressure flow simulation. The simulation proceeds by the mutual communication between 1D and 3D solvers. In this work a typical common rail injector with a mini-sac nozzle is studied. The lateral and radial movement of the needle and its effect on the cavitation generation and the subsequent spray penetration are analyzed. The result indicates the effect of compressibility of the liquid on damping the needle forces, and also the difference in the spray penetration levels due to the asymmetrical flow field. Therefore, this work intends to provide an efficient and user-friendly engineering tool for simulating a complete fuel injector including spray propagation. (paper)

Validation of accuracy and stability of numerical simulation for 2-D heat transfer system by an entropy production approach

Directory of Open Access Journals (Sweden)

Brohi Ali Anwar

2017-01-01

Full Text Available The entropy production in 2-D heat transfer system has been analyzed systematically by using the finite volume method, to develop new criteria for the numerical simulation in case of multidimensional systems, with the aid of the CFD codes. The steady-state heat conduction problem has been investigated for entropy production, and the entropy production profile has been calculated based upon the current approach. From results for 2-D heat conduction, it can be found that the stability of entropy production profile exhibits a better agreement with the exact solution accordingly, and the current approach is effective for measuring the accuracy and stability of numerical simulations for heat transfer problems.

3D numerical simulations of multiphase continental rifting

Science.gov (United States)

Naliboff, J.; Glerum, A.; Brune, S.

2017-12-01

Observations of rifted margin architecture suggest continental breakup occurs through multiple phases of extension with distinct styles of deformation. The initial rifting stages are often characterized by slow extension rates and distributed normal faulting in the upper crust decoupled from deformation in the lower crust and mantle lithosphere. Further rifting marks a transition to higher extension rates and coupling between the crust and mantle lithosphere, with deformation typically focused along large-scale detachment faults. Significantly, recent detailed reconstructions and high-resolution 2D numerical simulations suggest that rather than remaining focused on a single long-lived detachment fault, deformation in this phase may progress toward lithospheric breakup through a complex process of fault interaction and development. The numerical simulations also suggest that an initial phase of distributed normal faulting can play a key role in the development of these complex fault networks and the resulting finite deformation patterns. Motivated by these findings, we will present 3D numerical simulations of continental rifting that examine the role of temporal increases in extension velocity on rifted margin structure. The numerical simulations are developed with the massively parallel finite-element code ASPECT. While originally designed to model mantle convection using advanced solvers and adaptive mesh refinement techniques, ASPECT has been extended to model visco-plastic deformation that combines a Drucker Prager yield criterion with non-linear dislocation and diffusion creep. To promote deformation localization, the internal friction angle and cohesion weaken as a function of accumulated plastic strain. Rather than prescribing a single zone of weakness to initiate deformation, an initial random perturbation of the plastic strain field combined with rapid strain weakening produces distributed normal faulting at relatively slow rates of extension in both 2D and

MUSICA MetOp/IASI {H2O,δD} pair retrieval simulations for validating tropospheric moisture pathways in atmospheric models

Science.gov (United States)

Schneider, Matthias; Borger, Christian; Wiegele, Andreas; Hase, Frank; García, Omaira E.; Sepúlveda, Eliezer; Werner, Martin

2017-02-01

The project MUSICA (MUlti-platform remote Sensing of Isotopologues for investigating the Cycle of Atmospheric water) has shown that the sensor IASI aboard the satellite MetOp can measure the free tropospheric {H2O,δD} pair distribution twice per day on a quasi-global scale. Such data are very promising for investigating tropospheric moisture pathways, however, the complex data characteristics compromise their usage in the context of model evaluation studies. Here we present a tool that allows for simulating MUSICA MetOp/IASI {H2O,δD} pair remote sensing data for a given model atmosphere, thereby creating model data that have the remote sensing data characteristics assimilated. This model data can then be compared to the MUSICA data. The retrieval simulation method is based on the physical principles of radiative transfer and we show that the uncertainty of the simulations is within the uncertainty of the MUSICA MetOp/IASI products, i.e. the retrieval simulations are reliable enough. We demonstrate the working principle of the simulator by applying it to ECHAM5-wiso model data. The few case studies clearly reveal the large potential of the MUSICA MetOp/IASI {H2O,δD} data pairs for evaluating modelled moisture pathways. The tool is made freely available in form of MATLAB and Python routines and can be easily connected to any atmospheric water vapour isotopologue model.

Titan2D simulations of dome-collapse pyroclastic flows for crisis assessments on Montserrat

Science.gov (United States)

Widiwijayanti, C.; Voight, B.; Hidayat, D.; Patra, A.; Pitman, E.

2010-12-01

The Soufriere Hills Volcano (SHV), Montserrat, has experienced numerous episodes of lava dome collapses since 1995. Collapse volumes range from small rockfalls to major dome collapses (as much as ~200 M m3). Problems arise in hazards mitigation, particularly in zoning for populated areas. Determining the likely extent of flowage deposits in various scenarios is important for hazards zonation, provision of advice by scientists, and decision making by public officials. Towards resolution of this issue we have tested the TITAN2D code, calibrated parameters for an SHV database, and using updated topography have provided flowage maps for various scenarios and volume classes from SHV, for use in hazards assessments. TITAN2D is a map plane (depth averaged) simulator of granular flow and yields mass distributions over a DEM. Two Coulomb frictional parameters (basal and internal frictions) and initial source conditions (volume, source location, and source geometry) of single or multiple pulses in a dome-collapse type event control behavior of the flow. Flow kinematics are captured, so that the dynamics of flow can be examined spatially from frame to frame, or as a movie. Our hazard maps include not only the final deposit, but also areas inundated by moving debris prior to deposition. Simulations from TITAN2D were important for analysis of crises in the period 2007-2010. They showed that any very large mass released on the north slope would be strongly partitioned by local topography, and thus it was doubtful that flows of very large size (>20 M m3) could be generated in the Belham River drainage. This partitioning effect limited runout toward populated areas. These effects were interpreted to greatly reduce the down-valley risk of ash-cloud surges.

A 2D Array of 100's of Ions for Quantum Simulation and Many-Body Physics in a Penning Trap

Science.gov (United States)

Bohnet, Justin; Sawyer, Brian; Britton, Joseph; Bollinger, John

2015-05-01

Quantum simulations promise to reveal new materials and phenomena for experimental study, but few systems have demonstrated the capability to control ensembles in which quantum effects cannot be directly computed. One possible platform for intractable quantum simulations may be a system of 100's of 9Be+ ions in a Penning trap, where the valence electron spins are coupled with an effective Ising interaction in a 2D geometry. Here we report on results from a new Penning trap designed for 2D quantum simulations. We characterize the ion crystal stability and describe progress towards bench-marking quantum effects of the spin-spin coupling using a spin-squeezing witness. We also report on the successful photodissociation of BeH+ contaminant molecular ions that impede the use of such crystals for quantum simulation. This work lays the foundation for future experiments such as the observation of spin dynamics under the quantum Ising Hamiltonian with a transverse field. Supported by a NIST-NRC Research Associateship.

Simulátor 3D tiskárny

OpenAIRE

Čillo, Vladimír

2015-01-01

Tato bakalářská práce se zabýva návrhem a implementací simulátoru 3D tiskárny v jazyce C++ s využitím knihovny Qt. Simulátor předpokládá tiskárnu založenou na nejrozšířenější metodě 3D tisku - Fused Deposition Modeling. Vstupem simulátoru je 3D model ve formátu STL. Pro daný 3D model simulátor poskytuje odhad celkové doby tisku. Součástí simulace je také vizualizace procesu 3D tisku. Výsledkem práce je přenositelný program testovaný pod operačními systémy Linux a Windows. Funkčnost simulátoru...

Simulation of trickle irrigation, an extension to the US Geological Survey's computer program VS2D

Science.gov (United States)

Healy, R.W.

1987-01-01

A method is presented for simulating water movement through unsaturated porous media in response to a constant rate of application from a surface source. Because the rate at which water can be absorbed by soil is limited, the water will pond; therefore the actual surface area over which the water is applied may change with time and in general will not be known beforehand. An iterative method is used to determine the size of this ponded area at any time. This method will be most useful for simulating trickling irrigation, but also may be of value for simulating movement of water is soils as the result of an accidental spill. The method is an extension to the finite difference computer program VS2D developed by the U.S. Geological Survey, which simulates water movement through variably saturated porous media. The simulated region can be a vertical, 2-dimensional cross section for treatment of a surface line source or an axially symmetric, 3-dimensional cylinder for a point source. Five test problems, obtained from the literature , are used to demonstrate the ability of the method to accurately match analytical and experimental results. (Author 's abstract)

Developing R&D portfolio business validity simulation model and system.

Science.gov (United States)

Yeo, Hyun Jin; Im, Kwang Hyuk

2015-01-01

The R&D has been recognized as critical method to take competitiveness by not only companies but also nations with its value creation such as patent value and new product. Therefore, R&D has been a decision maker's burden in that it is hard to decide how much money to invest, how long time one should spend, and what technology to develop which means it accompanies resources such as budget, time, and manpower. Although there are diverse researches about R&D evaluation, business factors are not concerned enough because almost all previous studies are technology oriented evaluation with one R&D technology based. In that, we early proposed R&D business aspect evaluation model which consists of nine business model components. In this research, we develop a simulation model and system evaluating a company or industry's R&D portfolio with business model point of view and clarify default and control parameters to facilitate evaluator's business validity work in each evaluation module by integrate to one screen.

Hall-Effect Thruster Simulations with 2-D Electron Transport and Hydrodynamic Ions

Science.gov (United States)

Mikellides, Ioannis G.; Katz, Ira; Hofer, Richard H.; Goebel, Dan M.

2009-01-01

A computational approach that has been used extensively in the last two decades for Hall thruster simulations is to solve a diffusion equation and energy conservation law for the electrons in a direction that is perpendicular to the magnetic field, and use discrete-particle methods for the heavy species. This "hybrid" approach has allowed for the capture of bulk plasma phenomena inside these thrusters within reasonable computational times. Regions of the thruster with complex magnetic field arrangements (such as those near eroded walls and magnets) and/or reduced Hall parameter (such as those near the anode and the cathode plume) challenge the validity of the quasi-one-dimensional assumption for the electrons. This paper reports on the development of a computer code that solves numerically the 2-D axisymmetric vector form of Ohm's law, with no assumptions regarding the rate of electron transport in the parallel and perpendicular directions. The numerical challenges related to the large disparity of the transport coefficients in the two directions are met by solving the equations in a computational mesh that is aligned with the magnetic field. The fully-2D approach allows for a large physical domain that extends more than five times the thruster channel length in the axial direction, and encompasses the cathode boundary. Ions are treated as an isothermal, cold (relative to the electrons) fluid, accounting for charge-exchange and multiple-ionization collisions in the momentum equations. A first series of simulations of two Hall thrusters, namely the BPT-4000 and a 6-kW laboratory thruster, quantifies the significance of ion diffusion in the anode region and the importance of the extended physical domain on studies related to the impact of the transport coefficients on the electron flow field.

SU-F-T-184: 3D Range-Modulator for Scanned Particle Therapy: Development, Monte Carlo Simulations and Measurements

Energy Technology Data Exchange (ETDEWEB)

Simeonov, Y; Penchev, P; Ringbaek, T Printz [University of Applied Sciences, Institute of Medical Physics and Radiation Protection, Giessen (Germany); Brons, S [Heidelberg Ion-Beam Therapy Center (HIT), Heidelberg (Germany); Weber, U [GSI Helmholtzzentrum fuer Schwerionenforschung GmbH, Darmstadt (Germany); Zink, K [University of Applied Sciences, Institute of Medical Physics and Radiation Protection, Giessen (Germany); University Hospital Giessen-Marburg, Marburg (Germany)

2016-06-15

Purpose: Active raster scanning in particle therapy results in highly conformal dose distributions. Treatment time, however, is relatively high due to the large number of different iso-energy layers used. By using only one energy and the so called 3D range-modulator irradiation times of a few seconds only can be achieved, thus making delivery of homogeneous dose to moving targets (e.g. lung cancer) more reliable. Methods: A 3D range-modulator consisting of many pins with base area of 2.25 mm2 and different lengths was developed and manufactured with rapid prototyping technique. The form of the 3D range-modulator was optimised for a spherical target volume with 5 cm diameter placed at 25 cm in a water phantom. Monte Carlo simulations using the FLUKA package were carried out to evaluate the modulating effect of the 3D range-modulator and simulate the resulting dose distribution. The fine and complicated contour form of the 3D range-modulator was taken into account by a specially programmed user routine. Additionally FLUKA was extended with the capability of intensity modulated scanning. To verify the simulation results dose measurements were carried out at the Heidelberg Ion Therapy Center (HIT) with a 400.41 MeV 12C beam. Results: The high resolution measurements show that the 3D range-modulator is capable of producing homogeneous 3D conformal dose distributions, simultaneously reducing significantly irradiation time. Measured dose is in very good agreement with the previously conducted FLUKA simulations, where slight differences were traced back to minor manufacturing deviations from the perfect optimised form. Conclusion: Combined with the advantages of very short treatment time the 3D range-modulator could be an alternative to treat small to medium sized tumours (e.g. lung metastasis) with the same conformity as full raster-scanning treatment. Further simulations and measurements of more complex cases will be conducted to investigate the full potential of the 3D

Study of simple super-critical fluids (CO2, C2D6) through neutron scattering, Raman spectroscopy and molecular dynamic simulations

International Nuclear Information System (INIS)

Longelin, St.

2004-04-01

Super-critical fluids are largely used in industrial sectors. However the knowledge of the physical phenomena in which they are involved stays insufficient because of their particular properties. A new model of adjusting molecular structures is proposed, this model has been validated through neutron scattering experiments with high momentum transfer on C 2 D 6 . The experimental representation of the critical universal function for C 2 D 6 and CO 2 has been obtained through the neutron echo spin and by relying on structure measurements made through neutron elastic scattering at small angles. Raman spectroscopy and molecular dynamics simulation have been used to feature structure and dynamics. Scattering as well as microscopic molecular density fluctuations have been analysed

Simulation of decay heat removal by natural convection in a pool type fast reactor model-ramona-with coupled 1D/2D thermal hydraulic code system

Energy Technology Data Exchange (ETDEWEB)

Kasinathan, N.; Rajakumar, A.; Vaidyanathan, G.; Chetal, S.C. [Indira Gandhi Centre for Atomic Research, Kalpakkam (India)

1995-09-01

Post shutdown decay heat removal is an important safety requirement in any nuclear system. In order to improve the reliability of this function, Liquid metal (sodium) cooled fast breeder reactors (LMFBR) are equipped with redundant hot pool dipped immersion coolers connected to natural draught air cooled heat exchangers through intermediate sodium circuits. During decay heat removal, flow through the core, immersion cooler primary side and in the intermediate sodium circuits are also through natural convection. In order to establish the viability and validate computer codes used in making predictions, a 1:20 scale experimental model called RAMONA with water as coolant has been built and experimental simulation of decay heat removal situation has been performed at KfK Karlsruhe. Results of two such experiments have been compiled and published as benchmarks. This paper brings out the results of the numerical simulation of one of the benchmark case through a 1D/2D coupled code system, DHDYN-1D/THYC-2D and the salient features of the comparisons. Brief description of the formulations of the codes are also included.

Comparison of 2D and 3D modeled tumor motion estimation/prediction for dynamic tumor tracking during arc radiotherapy

Science.gov (United States)

Liu, Wu; Ma, Xiangyu; Yan, Huagang; Chen, Zhe; Nath, Ravinder; Li, Haiyun

2017-05-01

Many real-time imaging techniques have been developed to localize a target in 3D space or in a 2D beam’s eye view (BEV) plane for intrafraction motion tracking in radiation therapy. With tracking system latency, the 3D-modeled method is expected to be more accurate even in terms of 2D BEV tracking error. No quantitative analysis, however, has been reported. In this study, we simulated co-planar arc deliveries using respiratory motion data acquired from 42 patients to quantitatively compare the accuracy between 2D BEV and 3D-modeled tracking in arc therapy and to determine whether 3D information is needed for motion tracking. We used our previously developed low kV dose adaptive MV-kV imaging and motion compensation framework as a representative of 3D-modeled methods. It optimizes the balance between additional kV imaging dose and 3D tracking accuracy and solves the MLC blockage issue. With simulated Gaussian marker detection errors (zero mean and 0.39 mm standard deviation) and ~155/310/460 ms tracking system latencies, the mean percentage of time that the target moved  >2 mm from the predicted 2D BEV position are 1.1%/4.0%/7.8% and 1.3%/5.8%/11.6% for the 3D-modeled and 2D-only tracking, respectively. The corresponding average BEV RMS errors are 0.67/0.90/1.13 mm and 0.79/1.10/1.37 mm. Compared to the 2D method, the 3D method reduced the average RMS unresolved motion along the beam direction from ~3 mm to ~1 mm, resulting in on average only  <1% dosimetric advantage in the depth direction. Only for a small fraction of the patients, when tracking latency is long, the 3D-modeled method showed significant improvement of BEV tracking accuracy, indicating potential dosimetric advantage. However, if the tracking latency is short (~150 ms or less), those improvements are limited. Therefore, 2D BEV tracking has sufficient targeting accuracy for most clinical cases. The 3D technique is, however, still important in solving the MLC blockage problem

Insights into the growth rate of spatially evolving plane turbulent free-shear layers from 2D vortex-gas simulations

Science.gov (United States)

Suryanarayanan, Saikishan; Narasimha, Roddam

2017-02-01

Although the free-shear or mixing layer has been a subject of extensive research over nearly a century, there are certain fundamental issues that remain controversial. These include the influence of initial and downstream conditions on the flow, the effect of velocity ratio across the layer, and the nature of any possible coupling between small scale dynamics and the large scale evolution of layer thickness. In the spirit of the temporal vortex-gas simulations of Suryanarayanan et al. ["Free turbulent shear layer in a point vortex gas as a problem in nonequilibrium statistical mechanics," Phys. Rev. E 89, 013009 (2014)], we revisit the simple 2D inviscid vortex-gas model with extensive computations and detailed analysis, in order to gain insights into some of the above issues. Simulations of the spatially evolving vortex-gas shear layer are carried out at different velocity ratios using a computational model based on the work of Basu et al. ["Vortex sheet simulation of a plane canonical mixing layer," Comput. Fluids 21, 1-30 (1992) and "Modelling plane mixing layers using vortex points and sheets," Appl. Math. Modell. 19, 66-75 (1995)], but with a crucial improvement that ensures conservation of global circulation. The simulations show that the conditions imposed at the origin of the free shear layer and at the exit to the computational domain can affect flow evolution in their respective downstream and upstream neighbourhoods, the latter being particularly strong in the single stream limit. In between these neighbourhoods at the ends is a regime of universal self-preserving growth rate given by a universal function of velocity ratio. The computed growth rates are generally located within the scatter of experimental data on plane mixing layers and closely agree with recent high Reynolds number experiments and 3D large eddy simulation studies. These findings support the view that observed free-shear layer growth can be largely explained by the 2D vortex dynamics of

2-D FEM Simulation of Propagation and Radiation of Leaky Lamb Wave in a Plate-Type Ultrasonic Waveguide Sensor

Energy Technology Data Exchange (ETDEWEB)

Park, Sang-Jin; Kim, Hoe-Woong; Joo, Young-Sang; Kim, Sung-Kyun; Kim, Jong-Bum [KAERI, Daejeon (Korea, Republic of)

2016-05-15

This paper introduces the 2-D FEM simulation of the propagation and radiation of the leaky Lamb wave in and from a plate-type ultrasonic waveguide sensor conducted for the radiation beam profile analysis. The FEM simulations are performed with three different excitation frequencies and the radiation beam profiles obtained from FEM simulations are compared with those obtained from corresponding experiments. This paper deals with the 2-D FEM simulation of the propagation and radiation of the leaky Lamb wave in and from a plate-type ultrasonic waveguide sensor conducted to analyze the radiation beam profiles. The radiation beam profile results obtained from the FEM simulation show good agreement with the ones obtained from the experiment. This result will be utilized to improve the performance of the developed waveguide sensor. The quality of the visualized image is mainly affected by beam profile characteristics of the leaky wave radiated from the waveguide sensor. However, the relationships between the radiation beam profile and many parameters of the waveguide sensor are not fully revealed yet. Therefore, further parametric studies are necessary to improve the performance of the sensor and the finite element method (FEM) is one of the most effective tools for the parametric study.

Simulation of 4f-5d transitions of Yb2+ in potassium and sodium halides

International Nuclear Information System (INIS)

Duan Changkui; Tanner, P A

2008-01-01

The free ion energy level parameters of Yb 2+ are obtained by fitting the 4f 13 5d Yb 2+ free ion energy levels. A model is proposed for scaling these parameters so that they are appropriate for Yb 2+ in crystals. Treating the scaling factor, the barycenter energy E exc of the 4f 13 5d configuration, and the crystal-field splitting parameter B 4 (dd) as free parameters and adopting the 4f crystal-field parameters of the 4f 13 configuration Yb 3+ ion in other hosts with the same ligands, the absorption spectra of Yb 2+ in MX (M = K, Na; X = F, Cl, Br, I) hosts are well simulated. A model is proposed for taking the effect of charge compensation into account and this shows that the inclusion of charge compensation effects does not significantly alter the calculated electronic absorption spectra but may considerably change the dynamics of the system

Numerical simulation of 3D boundary-driven acoustic streaming in microfluidic devices.

Science.gov (United States)

Lei, Junjun; Hill, Martyn; Glynne-Jones, Peter

2014-02-07

This article discusses three-dimensional (3D) boundary-driven streaming in acoustofluidic devices. Firstly, the 3D Rayleigh streaming pattern in a microchannel is simulated and its effect on the movement of microparticles of various sizes is demonstrated. The results obtained from this model show good comparisons with 3D experimental visualisations and demonstrate the fully 3D nature of the acoustic streaming field and the associated acoustophoretic motion of microparticles in acoustofluidic devices. This method is then applied to another acoustofluidic device in order to gain insights into an unusual in-plane streaming pattern. The origin of this streaming has not been fully described and its characteristics cannot be explained from the classical theory of Rayleigh streaming. The simulated in-plane streaming pattern was in good agreement with the experimental visualisation. The mechanism behind it is shown to be related to the active sound intensity field, which supports our previous findings on the mechanism of the in-plane acoustic streaming pattern visualised and modelled in a thin-layered capillary device.

Numerical simulation of the shot peening process under previous loading conditions

International Nuclear Information System (INIS)

Romero-Ángeles, B; Urriolagoitia-Sosa, G; Torres-San Miguel, C R; Molina-Ballinas, A; Benítez-García, H A; Vargas-Bustos, J A; Urriolagoitia-Calderón, G

2015-01-01

This research presents a numerical simulation of the shot peening process and determines the residual stress field induced into a component with a previous loading history. The importance of this analysis is based on the fact that mechanical elements under shot peening are also subjected to manufacturing processes, which convert raw material into finished product. However, material is not provided in a virgin state, it has a previous loading history caused by the manner it is fabricated. This condition could alter some beneficial aspects of the residual stress induced by shot peening and could accelerate the crack nucleation and propagation progression. Studies were performed in beams subjected to strain hardening in tension (5ε y ) before shot peening was applied. Latter results were then compared in a numerical assessment of an induced residual stress field by shot peening carried out in a component (beam) without any previous loading history. In this paper, it is clearly shown the detrimental or beneficial effect that previous loading history can bring to the mechanical component and how it can be controlled to improve the mechanical behavior of the material

Precipitation Processes Developed During ARM (1997), TOGA COARE (1992) GATE (1974), SCSMEX (1998), and KWAJEX (1999): Consistent 3D, Semi-3D and 3D Cloud Resolving Model Simulations

Science.gov (United States)

Tao, W.-K.; Hou, A.; Atlas, R.; Starr, D.; Sud, Y.

2003-01-01

Real clouds and cloud systems are inherently three-dimensional (3D). Because of the limitations in computer resources, however, most cloud-resolving models (CRMs) today are still two-dimensional (2D) have been used to study the response of clouds to large-scale forcing. IN these 3D simulators, the model domain was small, and the integration time was 6 hours. Only recently have 3D experiments been performed for multi-day periods for tropical clouds systems with large horizontal domains at the National Center of Atmospheric Research (NCAR) and at NASA Goddard Space Center. At Goddard, a 3D cumulus Ensemble (GCE) model was used to simulate periods during TOGA COARE, GATE, SCSMEX, ARM, and KWAJEX using a 512 by 512 km domain (with 2-km resolution). The result indicate that surface precipitation and latent heating profiles are very similar between the 2D and 3D GCE model simulation. The major objective of this paper are: (1) to assess the performance of the super-parametrization technique, (2) calculate and examine the surface energy (especially radiation) and water budget, and (3) identify the differences and similarities in the organization and entrainment rates of convection between simulated 2D and 3D cloud systems.

2D fluid-analytical simulation of electromagnetic effects in low pressure, high frequency electronegative capacitive discharges

International Nuclear Information System (INIS)

Kawamura, E; Lichtenberg, A J; Lieberman, M A; Marakhtanov, A M

2016-01-01

A fast 2D axisymmetric fluid-analytical multifrequency capacitively coupled plasma (CCP) reactor code is used to study center high nonuniformity in a low pressure electronegative chlorine discharge. In the code, a time-independent Helmholtz wave equation is used to solve for the capacitive fields in the linearized frequency domain. This eliminates the time dependence from the electromagnetic (EM) solve, greatly speeding up the simulations at the cost of neglecting higher harmonics. However, since the code allows up to three driving frequencies, we can add the two most important harmonics to the CCP simulations as the second and third input frequencies. The amplitude and phase of these harmonics are estimated by using a recently developed 1D radial nonlinear transmission line (TL) model of a highly asymmetric cylindrical discharge (Lieberman et al 2015 Plasma Sources Sci. Technol. 24 055011). We find that at higher applied frequencies, the higher harmonics contribute significantly to the center high nonuniformity due to their shorter plasma wavelengths. (paper)

A 3D kinetic Monte Carlo simulation study of resistive switching processes in Ni/HfO2/Si-n+-based RRAMs

International Nuclear Information System (INIS)

Aldana, S; García-Fernández, P; Jiménez-Molinos, F; Gómez-Campos, F; Roldán, J B; Rodríguez-Fernández, Alberto; Romero-Zaliz, R; González, M B; Campabadal, F

2017-01-01

A new RRAM simulation tool based on a 3D kinetic Monte Carlo algorithm has been implemented. The redox reactions and migration of cations are developed taking into consideration the temperature and electric potential 3D distributions within the device dielectric at each simulation time step. The filamentary conduction has been described by obtaining the percolation paths formed by metallic atoms. Ni/HfO 2 /Si-n + unipolar devices have been fabricated and measured. The different experimental characteristics of the devices under study have been reproduced with accuracy by means of simulations. The main physical variables can be extracted at any simulation time to clarify the physics behind resistive switching; in particular, the final conductive filament shape can be studied in detail. (paper)

3D printing to simulate laparoscopic choledochal surgery.

Science.gov (United States)

Burdall, Oliver C; Makin, Erica; Davenport, Mark; Ade-Ajayi, Niyi

2016-05-01

Laparoscopic simulation has transformed skills acquisition for many procedures. However, realistic nonbiological simulators for complex reconstructive surgery are rare. Life-like tactile feedback is particularly difficult to reproduce. Technological innovations may contribute novel solutions to these shortages. We describe a hybrid model, harnessing 3D technology to simulate laparoscopic choledochal surgery for the first time. Digital hepatic anatomy images and standard laparoscopic trainer dimensions were employed to create an entry level laparoscopic choledochal surgery model. The information was fed into a 3D systems project 660pro with visijet pxl core powder to create a free standing liver mold. This included a cuboid portal in which to slot disposable hybrid components representing hepatic and pancreatic ducts and choledochal cyst. The mold was used to create soft silicone replicas with T28 resin and T5 fast catalyst. The model was assessed at a national pediatric surgery training day. The 10 delegates that trialed the simulation felt that the tactile likeness was good (5.6/10±1.71, 10=like the real thing), was not too complex (6.2/10±1.35; where 1=too simple, 10=too complicated), and generally very useful (7.36/10±1.57, 10=invaluable). 100% stated that they felt they could reproduce this in their own centers, and 100% would recommend this simulation to colleagues. Though this first phase choledochal cyst excision simulation requires further development, 3D printing provides a useful means of creating specific and detailed simulations for rare and complex operations with huge potential for development. Copyright © 2016. Published by Elsevier Inc.

Non-equilibrium hydrogen ionization in 2D simulations of the solar atmosphere

Science.gov (United States)

Leenaarts, J.; Carlsson, M.; Hansteen, V.; Rutten, R. J.

2007-10-01

Context: The ionization of hydrogen in the solar chromosphere and transition region does not obey LTE or instantaneous statistical equilibrium because the timescale is long compared with important hydrodynamical timescales, especially of magneto-acoustic shocks. Since the pressure, temperature, and electron density depend sensitively on hydrogen ionization, numerical simulation of the solar atmosphere requires non-equilibrium treatment of all pertinent hydrogen transitions. The same holds for any diagnostic application employing hydrogen lines. Aims: To demonstrate the importance and to quantify the effects of non-equilibrium hydrogen ionization, both on the dynamical structure of the solar atmosphere and on hydrogen line formation, in particular Hα. Methods: We implement an algorithm to compute non-equilibrium hydrogen ionization and its coupling into the MHD equations within an existing radiation MHD code, and perform a two-dimensional simulation of the solar atmosphere from the convection zone to the corona. Results: Analysis of the simulation results and comparison to a companion simulation assuming LTE shows that: a) non-equilibrium computation delivers much smaller variations of the chromospheric hydrogen ionization than for LTE. The ionization is smaller within shocks but subsequently remains high in the cool intershock phases. As a result, the chromospheric temperature variations are much larger than for LTE because in non-equilibrium, hydrogen ionization is a less effective internal energy buffer. The actual shock temperatures are therefore higher and the intershock temperatures lower. b) The chromospheric populations of the hydrogen n = 2 level, which governs the opacity of Hα, are coupled to the ion populations. They are set by the high temperature in shocks and subsequently remain high in the cool intershock phases. c) The temperature structure and the hydrogen level populations differ much between the chromosphere above photospheric magnetic elements

Direct 2-D reconstructions of conductivity and permittivity from EIT data on a human chest.

Science.gov (United States)

Herrera, Claudia N L; Vallejo, Miguel F M; Mueller, Jennifer L; Lima, Raul G

2015-01-01

A novel direct D-bar reconstruction algorithm is presented for reconstructing a complex conductivity distribution from 2-D EIT data. The method is applied to simulated data and archival human chest data. Permittivity reconstructions with the aforementioned method and conductivity reconstructions with the previously existing nonlinear D-bar method for real-valued conductivities depicting ventilation and perfusion in the human chest are presented. This constitutes the first fully nonlinear D-bar reconstructions of human chest data and the first D-bar permittivity reconstructions of experimental data. The results of the human chest data reconstructions are compared on a circular domain versus a chest-shaped domain.

2D-HB-Network at the air-water interface: A structural and dynamical characterization by means of ab initio and classical molecular dynamics simulations

Science.gov (United States)

Pezzotti, Simone; Serva, Alessandra; Gaigeot, Marie-Pierre

2018-05-01

Following our previous work where the existence of a special 2-Dimensional H-Bond (2D-HB)-Network was revealed at the air-water interface [S. Pezzotti et al., J. Phys. Chem. Lett. 8, 3133 (2017)], we provide here a full structural and dynamical characterization of this specific arrangement by means of both Density Functional Theory based and Force Field based molecular dynamics simulations. We show in particular that water at the interface with air reconstructs to maximize H-Bonds formed between interfacial molecules, which leads to the formation of an extended and non-interrupted 2-Dimensional H-Bond structure involving on average ˜90% of water molecules at the interface. We also show that the existence of such an extended structure, composed of H-Bonds all oriented parallel to the surface, constrains the reorientional dynamics of water that is hence slower at the interface than in the bulk. The structure and dynamics of the 2D-HB-Network provide new elements to possibly rationalize several specific properties of the air-water interface, such as water surface tension, anisotropic reorientation of interfacial water under an external field, and proton hopping.

Measurement of the hyperfine structure of the 31D2, 41D2, 51D2 levels of helium 3

International Nuclear Information System (INIS)

Lemery, H.; Hamel, J.; Barrat, J.-P.

1981-01-01

It is well known that, in a discharge in 3 He, the nuclear spins in the ground state can be oriented through metastability exchange, by optical pumping of the metastable 2 3 S 1 atoms. The orientation is transmitted to the other levels excited in the discharge. If the nuclear spins in the ground state are submitted to magnetic resonance, the light emitted from these excited states is modulated at the R.F. field frequency. The degree of modulation is important only near a level crossing, in zero field or in non-zero field. This method has been used to determine the hyperfine structure of the 3 1 D 2 , 4 1 D 2 , 5 1 D 2 levels. The results are in good agreement with those of previous measurements and with theoretical predictions [fr

Diversity of chimera-like patterns from a model of 2D arrays of neurons with nonlocal coupling

Science.gov (United States)

Tian, Chang-Hai; Zhang, Xi-Yun; Wang, Zhen-Hua; Liu, Zong-Hua

2017-06-01

Chimera states have been studied in 1D arrays, and a variety of different chimera states have been found using different models. Research has recently been extended to 2D arrays but only to phase models of them. Here, we extend it to a nonphase model of 2D arrays of neurons and focus on the influence of nonlocal coupling. Using extensive numerical simulations, we find, surprisingly, that this system can show most types of previously observed chimera states, in contrast to previous models, where only one or a few types of chimera states can be observed in each model. We also find that this model can show some special chimera-like patterns such as gridding and multicolumn patterns, which were previously observed only in phase models. Further, we present an effective approach, i.e., removing some of the coupling links, to generate heterogeneous coupling, which results in diverse chimera-like patterns and even induces transformations from one chimera-like pattern to another.

Developing R&D Portfolio Business Validity Simulation Model and System

Directory of Open Access Journals (Sweden)

Hyun Jin Yeo

2015-01-01

Full Text Available The R&D has been recognized as critical method to take competitiveness by not only companies but also nations with its value creation such as patent value and new product. Therefore, R&D has been a decision maker’s burden in that it is hard to decide how much money to invest, how long time one should spend, and what technology to develop which means it accompanies resources such as budget, time, and manpower. Although there are diverse researches about R&D evaluation, business factors are not concerned enough because almost all previous studies are technology oriented evaluation with one R&D technology based. In that, we early proposed R&D business aspect evaluation model which consists of nine business model components. In this research, we develop a simulation model and system evaluating a company or industry’s R&D portfolio with business model point of view and clarify default and control parameters to facilitate evaluator’s business validity work in each evaluation module by integrate to one screen.

Developing R&D Portfolio Business Validity Simulation Model and System

Science.gov (United States)

2015-01-01

The R&D has been recognized as critical method to take competitiveness by not only companies but also nations with its value creation such as patent value and new product. Therefore, R&D has been a decision maker's burden in that it is hard to decide how much money to invest, how long time one should spend, and what technology to develop which means it accompanies resources such as budget, time, and manpower. Although there are diverse researches about R&D evaluation, business factors are not concerned enough because almost all previous studies are technology oriented evaluation with one R&D technology based. In that, we early proposed R&D business aspect evaluation model which consists of nine business model components. In this research, we develop a simulation model and system evaluating a company or industry's R&D portfolio with business model point of view and clarify default and control parameters to facilitate evaluator's business validity work in each evaluation module by integrate to one screen. PMID:25893209

Simulating coronal condensation dynamics in 3D

Science.gov (United States)

Moschou, S. P.; Keppens, R.; Xia, C.; Fang, X.

2015-12-01

We present numerical simulations in 3D settings where coronal rain phenomena take place in a magnetic configuration of a quadrupolar arcade system. Our simulation is a magnetohydrodynamic simulation including anisotropic thermal conduction, optically thin radiative losses, and parametrised heating as main thermodynamical features to construct a realistic arcade configuration from chromospheric to coronal heights. The plasma evaporation from chromospheric and transition region heights eventually causes localised runaway condensation events and we witness the formation of plasma blobs due to thermal instability, that evolve dynamically in the heated arcade part and move gradually downwards due to interchange type dynamics. Unlike earlier 2.5D simulations, in this case there is no large scale prominence formation observed, but a continuous coronal rain develops which shows clear indications of Rayleigh-Taylor or interchange instability, that causes the denser plasma located above the transition region to fall down, as the system moves towards a more stable state. Linear stability analysis is used in the non-linear regime for gaining insight and giving a prediction of the system's evolution. After the plasma blobs descend through interchange, they follow the magnetic field topology more closely in the lower coronal regions, where they are guided by the magnetic dips.

Gauging the Nanotoxicity of h2D-C2N toward Single-Stranded DNA: An in Silico Molecular Simulation Approach.

Science.gov (United States)

Mukhopadhyay, Titas Kumar; Bhattacharyya, Kalishankar; Datta, Ayan

2018-04-12

Recent toxicological assessments of graphene, graphene oxides, and some other two-dimensional (2D) materials have shown them to be substantially toxic at the nanoscale, where they inhibit and eventually disrupt biological processes. These shortfalls of graphene and analogs have resulted in a quest for novel biocompatible 2D materials with minimum cytotoxicity. In this article, we demonstrate C 2 N (h2D-C 2 N), a newly synthesized 2D porous graphene analog, to be non-nanotoxic toward genetic materials from an "in-silico" point of view through sequence-dependent binding of different polynucleotide single-stranded DNA (ssDNA) onto it. The calculated binding energy of nucleobases and the free energy of binding of polynucleotides follow the common trait, cytosine > guanine > adenine > thymine, and are well within the limits of physisorption. Ab-initio simulations completely exclude the possibility of any chemical reaction, demonstrating purely noncovalent binding of nucleobases with C 2 N through a crucial interplay between hydrogen bonding and π-stacking interactions with the surface. Further, we show that the extent of distortion inflicted upon ssDNA by C 2 N is negligible. Analysis of the density of states of the nucleobase-C 2 N hybrids confirms minimum electronic perturbation of the bases after adsorption. Most importantly, we demonstrate the potency of C 2 N in nucleic acid transportation via reversible binding of ssDNA. The plausible use of C 2 N as a template for DNA repair is illustrated through an example of C 2 N-assisted complementary ssDNA winding.

The E2.65A mutation disrupts dynamic binding poses of SB269652 at the dopamine D2 and D3 receptors.

Directory of Open Access Journals (Sweden)

Ravi Kumar Verma

2018-01-01

Full Text Available The dopamine D2 and D3 receptors (D2R and D3R are important targets for antipsychotics and for the treatment of drug abuse. SB269652, a bitopic ligand that simultaneously binds both the orthosteric binding site (OBS and a secondary binding pocket (SBP in both D2R and D3R, was found to be a negative allosteric modulator. Previous studies identified Glu2.65 in the SBP to be a key determinant of both the affinity of SB269652 and the magnitude of its cooperativity with orthosteric ligands, as the E2.65A mutation decreased both of these parameters. However, the proposed hydrogen bond (H-bond between Glu2.65 and the indole moiety of SB269652 is not a strong interaction, and a structure activity relationship study of SB269652 indicates that this H-bond may not be the only element that determines its allosteric properties. To understand the structural basis of the observed phenotype of E2.65A, we carried out molecular dynamics simulations with a cumulative length of ~77 μs of D2R and D3R wild-type and their E2.65A mutants bound to SB269652. In combination with Markov state model analysis and by characterizing the equilibria of ligand binding modes in different conditions, we found that in both D2R and D3R, whereas the tetrahydroisoquinoline moiety of SB269652 is stably bound in the OBS, the indole-2-carboxamide moiety is dynamic and only intermittently forms H-bonds with Glu2.65. Our results also indicate that the E2.65A mutation significantly affects the overall shape and size of the SBP, as well as the conformation of the N terminus. Thus, our findings suggest that the key role of Glu2.65 in mediating the allosteric properties of SB269652 extends beyond a direct interaction with SB269652, and provide structural insights for rational design of SB269652 derivatives that may retain its allosteric properties.

Molecular dynamics simulation investigations of H2/D2 dissocitive chemisorption dynamics on Cun(n=13-14) Rigid/nonrigid clusters

International Nuclear Information System (INIS)

Elzein, N.

2004-01-01

In this work with a use of molecular dynamic simulations we have reported the results of a quasiclassical simulation study of the interaction of H2/(D2) with Cu N (N=13-14) atoms in both rigid /(non rigid) clusters.The geometry of the cluster is obtained by an embedded-atom (EA) mode potential, and the interaction between the molecule and cIuster is described by a LEPS -London-Eyring -Polanyi-Sato) potential energy function.Both channels the reactive dissociative adsorption of the molecule on the cIuster) and non reactive (scattering of the molecule from the cluster) are considered. The dissociative chemisorption probability, cross section and rate constant are studied as functions of the initial quantal rovibrational state of the molecule, collision energy, impact parameter and the temperature (OK,296K,834K ,1014K,1554K) of the clusters

High Field Side Lower Hybrid Current Drive Simulations for Off- axis Current Drive in DIII-D

Directory of Open Access Journals (Sweden)

Wukitch S.J.

2017-01-01

Full Text Available Efficient off-axis current drive scalable to reactors is a key enabling technology for developing economical, steady state tokamak. Previous studies have focussed on high field side (HFS launch of lower hybrid current drive (LHCD in double null configurations in reactor grade plasmas and found improved wave penetration and high current drive efficiency with driven current profile peaked near a normalized radius, ρ, of 0.6-0.8, consistent with advanced tokamak scenarios. Further, HFS launch potentially mitigates plasma material interaction and coupling issues. For this work, we sought credible HFS LHCD scenario for DIII-D advanced tokamak discharges through utilizing advanced ray tracing and Fokker Planck simulation tools (GENRAY+CQL3D constrained by experimental considerations. For a model and existing discharge, HFS LHCD scenarios with excellent wave penetration and current drive were identified. The LHCD is peaked off axis, ρ∼0.6-0.8, with FWHM Δρ=0.2 and driven current up to 0.37 MA/MW coupled. For HFS near mid plane launch, wave penetration is excellent and have access to single pass absorption scenarios for variety of plasmas for n||=2.6-3.4. These DIII-D discharge simulations indicate that HFS LHCD has potential to demonstrate efficient off axis current drive and current profile control in DIII-D existing and model discharge.

2D IR spectra of cyanide in water investigated by molecular dynamics simulations

Science.gov (United States)

Lee, Myung Won; Carr, Joshua K.; Göllner, Michael; Hamm, Peter; Meuwly, Markus

2013-01-01

Using classical molecular dynamics simulations, the 2D infrared (IR) spectroscopy of CN− solvated in D2O is investigated. Depending on the force field parametrizations, most of which are based on multipolar interactions for the CN− molecule, the frequency-frequency correlation function and observables computed from it differ. Most notably, models based on multipoles for CN− and TIP3P for water yield quantitatively correct results when compared with experiments. Furthermore, the recent finding that T 1 times are sensitive to the van der Waals ranges on the CN− is confirmed in the present study. For the linear IR spectrum, the best model reproduces the full widths at half maximum almost quantitatively (13.0 cm−1 vs. 14.9 cm−1) if the rotational contribution to the linewidth is included. Without the rotational contribution, the lines are too narrow by about a factor of two, which agrees with Raman and IR experiments. The computed and experimental tilt angles (or nodal slopes) α as a function of the 2D IR waiting time compare favorably with the measured ones and the frequency fluctuation correlation function is invariably found to contain three time scales: a sub-ps, 1 ps, and one on the 10-ps time scale. These time scales are discussed in terms of the structural dynamics of the surrounding solvent and it is found that the longest time scale (≈10 ps) most likely corresponds to solvent exchange between the first and second solvation shell, in agreement with interpretations from nuclear magnetic resonance measurements.

Simulation of N{sub f} = 2 + 1 lattice QCD at realistic quark masses

Energy Technology Data Exchange (ETDEWEB)

Schierholz, Gerrit

2014-07-01

So far most lattice QCD simulations are performed neglecting electromagnetic effects. In order to compute physical observables to high precision, it is important to include and control contributions from QED. We have initiated a similar program, as the symmetry of the electromagnetic current is similar to that of the mass matrix mass m=(m{sub u}+m{sub d}+m{sub s})/3=constant versus e{sub u}+e{sub d}+e{sub s}=constant=0. In a follow-up project we shall use this expansion and complement our previous simulations by a fully dynamical simulation of QCD+QED. (orig.)

Two-Fluid 2.5D MHD-Code for Simulations in the Solar Atmosphere

Czech Academy of Sciences Publication Activity Database

Piantschitsch, I.; Amerstorfer, U.; Thalmann, J.; Utz, D.; Hanslmeier, A.; Bárta, Miroslav; Thonhofer, S.; Lemmerer, B.

2014-01-01

Roč. 38, č. 1 (2014), s. 59-66 ISSN 1845-8319 R&D Projects: GA MŠk(CZ) 7AMB14AT022 Institutional support: RVO:67985815 Keywords : MHD simulation * chromosphere * reconnection Subject RIV: BN - Astronomy, Celestial Mechanics, Astrophysics

Title: Using Alignment and 2D Network Simulations to Study Charge Transport Through Doped ZnO Nanowire Thin Film Electrodes

KAUST Repository

Phadke, Sujay

2011-09-30

Factors affecting charge transport through ZnO nanowire mat films were studied by aligning ZnO nanowires on substrates and coupling experimental measurements with 2D nanowire network simulations. Gallium doped ZnO nanowires were aligned on thermally oxidized silicon wafer by shearing a nanowire dispersion in ethanol. Sheet resistances of nanowire thin films that had current flowing parallel to nanowire alignment direction were compared to thin films that had current flowing perpendicular to nanowire alignment direction. Perpendicular devices showed ∼5 fold greater sheet resistance than parallel devices supporting the hypothesis that aligning nanowires would increase conductivity of ZnO nanowire electrodes. 2-D nanowire network simulations of thin films showed that the device sheet resistance was dominated by inter-wire contact resistance. For a given resistivity of ZnO nanowires, the thin film electrodes would have the lowest possible sheet resistance if the inter-wire contact resistance was one order of magnitude lower than the single nanowire resistance. Simulations suggest that the conductivity of such thin film devices could be further enhanced by using longer nanowires. Solution processed Gallium doped ZnO nanowires are aligned on substrates using an innovative shear coating technique. Nanowire alignment has shown improvement in ZnO nanowire transparent electrode conductivity. 2D network simulations in conjunction with electrical measurements have revealed different regimes of operation of nanowire thin films and provided a guideline for improving electrical performance of nanowire electrodes. Copyright © 2011 WILEY-VCH Verlag GmbH & Co. KGaA, Weinheim.

Comparative MD Simulations Indicate a Dual Role for Arg1323.50 in Dopamine-Dependent D2R Activation.

Directory of Open Access Journals (Sweden)

Ralf C Kling

Full Text Available Residue Arg3.50 belongs to the highly conserved DRY-motif of class A GPCRs, which is located at the bottom of TM3. On the one hand, Arg3.50 has been reported to help stabilize the inactive state of GPCRs, but on the other hand has also been shown to be crucial for stabilizing active receptor conformations and mediating receptor-G protein coupling. The combined results of these studies suggest that the exact function of Arg3.50 is likely to be receptor-dependent and must be characterized independently for every GPCR. Consequently, we now present comparative molecular-dynamics simulations that use our recently described inactive-state and Gα-bound active-state homology models of the dopamine D2 receptor (D2R, which are either bound to dopamine or ligand-free, performed to identify the function of Arg1323.50 in D2R. Our results are consistent with a dynamic model of D2R activation in which Arg1323.50 adopts a dual role, both by stabilizing the inactive-state receptor conformation and enhancing dopamine-dependent D2R-G protein coupling.

Comparison between a coupled 1D-2D model and a fully 2D model for supercritical flow simulation in crossroads

KAUST Repository

Ghostine, Rabih; Hoteit, Ibrahim; Vazquez, Jose; Terfous, Abdelali; Ghenaim, Abdellah; Mose, Robert

2014-01-01

In open channel networks, flow is usually approximated by the one-dimensional (1D) Saint-Venant equations coupled with an empirical junction model. In this work, a comparison in terms of accuracy and computational cost between a coupled 1D-2D

2D gravity, random surfaces and all that

International Nuclear Information System (INIS)

Ambjoern, J.

1990-11-01

I review the recent progress in 2d gravity and discuss the new numerical simulations for 2d gravity and for random surfaces in d>2. The random surface theories of interest in d>2 have extrinsic curvature terms, and for a finite value of the extrinsic curvature coupling there seems to be a second order phase transition where the string tension scales. (orig.)

Progress towards 3D black hole merger simulations

International Nuclear Information System (INIS)

Seidel, E.

2001-01-01

I review recent progress in 3D numerical relativity, focused on simulations involving black holes evolved with singularity avoiding slicings, but also touching on recent results in advanced techniques like black hole excision. After a long series of axisymmetric and perturbative studies of distorted black holes and black hole collisions, similar studies were carried out with full 3D codes. The results showed that such black hole simulations can be carried out extremely accurately, although instabilities plague the simulation at uncomfortably early times. However, new formulations of Einstein's equations allow much more stable 3D evolutions than ever before, enabling the first studies of 3D gravitational collapse to a black hole. With these new formulations, for example, it has been possible to perform the first detailed simulations of 3D grazing collisions of black holes with unequal mass, spin, and with orbital angular momentum. I discuss the 3D black hole physics that can now be studied, and prospects for the future, which look increasingly bright due to recent progress in formulations, black hole excision, new gauge conditions, and larger computers. Simulations may soon be able to provide information about the final plunge of two black holes, of relevance for gravitational wave astronomy. (author)

Tunnel Field-Effect Transistors in 2-D Transition Metal Dichalcogenide Materials

Science.gov (United States)

Ilatikhameneh, Hesameddin; Tan, Yaohua; Novakovic, Bozidar; Klimeck, Gerhard; Rahman, Rajib; Appenzeller, Joerg

2015-12-01

In this work, the performance of Tunnel Field-Effect Transistors (TFETs) based on two-dimensional Transition Metal Dichalcogenide (TMD) materials is investigated by atomistic quantum transport simulations. One of the major challenges of TFETs is their low ON-currents. 2D material based TFETs can have tight gate control and high electric fields at the tunnel junction, and can in principle generate high ON-currents along with a sub-threshold swing smaller than 60 mV/dec. Our simulations reveal that high performance TMD TFETs, not only require good gate control, but also rely on the choice of the right channel material with optimum band gap, effective mass and source/drain doping level. Unlike previous works, a full band atomistic tight binding method is used self-consistently with 3D Poisson equation to simulate ballistic quantum transport in these devices. The effect of the choice of TMD material on the performance of the device and its transfer characteristics are discussed. Moreover, the criteria for high ON-currents are explained with a simple analytic model, showing the related fundamental factors. Finally, the subthreshold swing and energy-delay of these TFETs are compared with conventional CMOS devices.

/sup 1/H NMR study of 2-deoxy-D-arabino-hexopyranose (2-deoxy-glucopyranose), 2-deoxy-D-lyxo-hexopyranose (2-deoxy-galactopyranose) and 2'-deoxy lactose. Shift increment studies in 2-deoxy carbohydrates

Energy Technology Data Exchange (ETDEWEB)

de Bruyn, A; Anteunis, M [Ghent Rijksuniversiteit (Belgium)

1975-01-01

Complete analyses are given of the /sup 1/H n.m.r. spectra at 300 MHz of D/sub 2/O solutions of 2-deoxy-D-arabino-hexopyranose, 2-deoxy-D-lyxo-hexopyranose and 2'-deoxy lactose. Chemical shifts in the deoxy monosaccharides and in 2'-deoxy lactose are compared with those previously obtained in the parent aldeohexopyranoses, glucobioses and D-galactopyranosol-D-glucoses. Increment values are suggested in order to predict chemical shifts in 2-deoxy derivatives from the well known rules for aldohexopyranoses.

Laser-probing measurements and calculations of lifetimes of the 5d 2D3 at ∼sol∼ at 2 and 5d 2D5 at ∼sol∼ at 2 metastable levels in Ba II

International Nuclear Information System (INIS)

Gurell, J.; Lundin, P.; Mannervik, S.; Royen, P.; Schef, P.; Biemont, E.; Quinet, P.; Blagoev, K.; Fivet, V.; Norlin, L.-O.; Rostohar, D.

2007-01-01

The two metastable levels 5d 2 D 3 at ∼sol∼ at 2 and 5d 2 D 5 at ∼sol∼ at 2 in Ba II both show extremely long lifetimes of the order of several tens of seconds each. This has been found both by experiments and by theoretical predictions. The small transition probabilities associated with these two levels make them interesting and challenging for theoreticians as well as for experimentalists. Several calculations and measurements of these two lifetimes have been made previously but discrepancies between the results are present. This article presents values of τ=89.4±15.6 s for the 2 D 3 at ∼sol∼ at 2 level and τ=32.0±4.6 s for the 2 D 5 at ∼sol∼ at 2 level measured in a beam-laser experiment performed at the ion storage ring CRYRING. These values are supported by our new calculations resulting in τ=82.0 s for the 2 D 3 at ∼sol∼ at 2 level and τ=31.6 s for the 2 D 5 at ∼sol∼ at 2 level

Numerical simulation of Ge solar cells using D-AMPS-1D code

Energy Technology Data Exchange (ETDEWEB)

Barrera, Marcela, E-mail: barrera@tandar.cnea.gov.ar [Comision Nacional de Energia Atomica, Avenida General Paz 1499, San Martin 1650, Buenos Aires (Argentina); Consejo Nacional de Investigaciones Cientificas y Tecnicas (CONICET) (Argentina); Rubinelli, Francisco [Instituto de Desarrollo Tecnologico para la Industria Quimica (INTEC)-CONICET, Gueemes 3450, Santa Fe 3000 (Argentina); Rey-Stolle, Ignacio [Instituto de Energia Solar, Universidad Politecnica de Madrid, Avenida Complutense 30, Madrid 28040 (Spain); Pla, Juan [Comision Nacional de Energia Atomica, Avenida General Paz 1499, San Martin 1650, Buenos Aires (Argentina); Consejo Nacional de Investigaciones Cientificas y Tecnicas (CONICET) (Argentina)

2012-08-15

A solar cell is a solid state device that converts the energy of sunlight directly into electricity by the photovoltaic effect. When light with photon energies greater than the band gap is absorbed by a semiconductor material, free electrons and free holes are generated by optical excitation in the material. The main characteristic of a photovoltaic device is the presence of internal electric field able to separate the free electrons and holes so they can pass out of the material to the external circuit before they recombine. Numerical simulation of photovoltaic devices plays a crucial role in their design, performance prediction, and comprehension of the fundamental phenomena ruling their operation. The electrical transport and the optical behavior of the solar cells discussed in this work were studied with the simulation code D-AMPS-1D. This software is an updated version of the one-dimensional (1D) simulation program Analysis of Microelectronic and Photonic Devices (AMPS) that was initially developed at The Penn State University, USA. Structures such as homojunctions, heterojunctions, multijunctions, etc., resulting from stacking layers of different materials can be studied by appropriately selecting characteristic parameters. In this work, examples of cells simulation made with D-AMPS-1D are shown. Particularly, results of Ge photovoltaic devices are presented. The role of the InGaP buffer on the device was studied. Moreover, a comparison of the simulated electrical parameters with experimental results was performed.

Numerical simulation of Ge solar cells using D-AMPS-1D code

International Nuclear Information System (INIS)

Barrera, Marcela; Rubinelli, Francisco; Rey-Stolle, Ignacio; Plá, Juan

2012-01-01

A solar cell is a solid state device that converts the energy of sunlight directly into electricity by the photovoltaic effect. When light with photon energies greater than the band gap is absorbed by a semiconductor material, free electrons and free holes are generated by optical excitation in the material. The main characteristic of a photovoltaic device is the presence of internal electric field able to separate the free electrons and holes so they can pass out of the material to the external circuit before they recombine. Numerical simulation of photovoltaic devices plays a crucial role in their design, performance prediction, and comprehension of the fundamental phenomena ruling their operation. The electrical transport and the optical behavior of the solar cells discussed in this work were studied with the simulation code D-AMPS-1D. This software is an updated version of the one-dimensional (1D) simulation program Analysis of Microelectronic and Photonic Devices (AMPS) that was initially developed at The Penn State University, USA. Structures such as homojunctions, heterojunctions, multijunctions, etc., resulting from stacking layers of different materials can be studied by appropriately selecting characteristic parameters. In this work, examples of cells simulation made with D-AMPS-1D are shown. Particularly, results of Ge photovoltaic devices are presented. The role of the InGaP buffer on the device was studied. Moreover, a comparison of the simulated electrical parameters with experimental results was performed.

2D or Not 2D? Testing the Utility of 2D Vs. 3D Landmark Data in Geometric Morphometrics of the Sculpin Subfamily Oligocottinae (Pisces; Cottoidea).

Science.gov (United States)

Buser, Thaddaeus J; Sidlauskas, Brian L; Summers, Adam P

2018-05-01

We contrast 2D vs. 3D landmark-based geometric morphometrics in the fish subfamily Oligocottinae by using 3D landmarks from CT-generated models and comparing the morphospace of the 3D landmarks to one based on 2D landmarks from images. The 2D and 3D shape variables capture common patterns across taxa, such that the pairwise Procrustes distances among taxa correspond and the trends captured by principal component analysis are similar in the xy plane. We use the two sets of landmarks to test several ecomorphological hypotheses from the literature. Both 2D and 3D data reject the hypothesis that head shape correlates significantly with the depth at which a species is commonly found. However, in taxa where shape variation in the z-axis is high, the 2D shape variables show sufficiently strong distortion to influence the outcome of the hypothesis tests regarding the relationship between mouth size and feeding ecology. Only the 3D data support previous studies which showed that large mouth sizes correlate positively with high percentages of elusive prey in the diet. When used to test for morphological divergence, 3D data show no evidence of divergence, while 2D data show that one clade of oligocottines has diverged from all others. This clade shows the greatest degree of z-axis body depth within Oligocottinae, and we conclude that the inability of the 2D approach to capture this lateral body depth causes the incongruence between 2D and 3D analyses. Anat Rec, 301:806-818, 2018. © 2017 Wiley Periodicals, Inc. © 2017 Wiley Periodicals, Inc.

ScintSim1: a new Monte Carlo simulation code for transport of optical photons in 2D arrays of scintillation detectors

International Nuclear Information System (INIS)

Mosleh-Shirazi, Mohammad Amin; Karbasi, Sareh; Zarrini-Monfared, Zinat; Zamani, Ali

2014-01-01

Two-dimensional (2D) arrays of thick segmented scintillators are of interest as X-ray detectors for both 2D and 3D image-guided radiotherapy (IGRT). Their detection process involves ionizing radiation energy deposition followed by production and transport of optical photons. Only a very limited number of optical Monte Carlo simulation models exist, which has limited the number of modeling studies that have considered both stages of the detection process. We present ScintSim1, an in-house optical Monte Carlo simulation code for 2D arrays of scintillation crystals, developed in the MATLAB programming environment. The code was rewritten and revised based on an existing program for single-element detectors, with the additional capability to model 2D arrays of elements with configurable dimensions, material, etc., The code generates and follows each optical photon history through the detector element (and, in case of cross-talk, the surrounding ones) until it reaches a configurable receptor, or is attenuated. The new model was verified by testing against relevant theoretically known behaviors or quantities and the results of a validated single-element model. For both sets of comparisons, the discrepancies in the calculated quantities were all <1%. The results validate the accuracy of the new code, which is a useful tool in scintillation detector optimization. (author)

2D and 3D thermal simulations for storage systems with internal natural convection for canistered spent fuel

International Nuclear Information System (INIS)

Yaksh, M.; Wang, C.

2004-01-01

accuracy of the simulation internal to the canister. The actual design of a canistered system inside a concrete cask requires additional modelling effort, since the flow along the external surface of the canister must be included. The target design, however, employs a nonuniform heating of the PWR fuel assemblies, which permits the heat load of an individual PWR assembly to range from.88 kW to 1.35 kW in a zoned configuration. As nonuniform loading adds more complication to the 2D model, an additional confirmation of the 2D modelling methodology may be obtained by performing a three-dimensional (3D) simulation of a simplified version of the target design

Hybrid 2D-3D modelling of GTA welding with filler wire addition

KAUST Repository

Traidia, Abderrazak

2012-07-01

A hybrid 2D-3D model for the numerical simulation of Gas Tungsten Arc welding is proposed in this paper. It offers the possibility to predict the temperature field as well as the shape of the solidified weld joint for different operating parameters, with relatively good accuracy and reasonable computational cost. Also, an original approach to simulate the effect of immersing a cold filler wire in the weld pool is presented. The simulation results reveal two important observations. First, the weld pool depth is locally decreased in the presence of filler metal, which is due to the energy absorption by the cold feeding wire from the hot molten pool. In addition, the weld shape, maximum temperature and thermal cycles in the workpiece are relatively well predicted even when a 2D model for the arc plasma region is used. © 2012 Elsevier Ltd. All rights reserved.

2D-Driven 3D Object Detection in RGB-D Images

KAUST Repository

Lahoud, Jean

2017-12-25

In this paper, we present a technique that places 3D bounding boxes around objects in an RGB-D scene. Our approach makes best use of the 2D information to quickly reduce the search space in 3D, benefiting from state-of-the-art 2D object detection techniques. We then use the 3D information to orient, place, and score bounding boxes around objects. We independently estimate the orientation for every object, using previous techniques that utilize normal information. Object locations and sizes in 3D are learned using a multilayer perceptron (MLP). In the final step, we refine our detections based on object class relations within a scene. When compared to state-of-the-art detection methods that operate almost entirely in the sparse 3D domain, extensive experiments on the well-known SUN RGB-D dataset [29] show that our proposed method is much faster (4.1s per image) in detecting 3D objects in RGB-D images and performs better (3 mAP higher) than the state-of-the-art method that is 4.7 times slower and comparably to the method that is two orders of magnitude slower. This work hints at the idea that 2D-driven object detection in 3D should be further explored, especially in cases where the 3D input is sparse.

DEVELOPMENT OF A VIRTUAL 3D-SIMULATOR OF THE FEED PELLETING TECHNOLOGICAL PROCESS

Directory of Open Access Journals (Sweden)

N. Shcherbakov

2017-08-01

Full Text Available The process of developing a virtual 3D simulator of the process of granulation of mixed fodders is considered. The consequences of errors in the operation of press granulator operators are considered. The difficulties associated with the training of high-tech and expensive equipment operators are described. The necessity and described difficulties of acquiring practical skills of working with such equipment at the training stage are substantiated. It is argued the need to introduce computer simulators in educational institutions in order to improve the quality of the acquired knowledge, form a complex decision-making skill for future operators of technological processes. The results of a survey on improving the efficiency of management of technological processes after the introduction of simulators at enterprises are considered. The data of the simulator market and its forecasts for 2017 by regions and types of the interface used are presented. The conclusion is drawn about the growing popularity of simulators based on the 3D interface. The advantage of using the 3D interface with respect to the 2D interface is substantiated. The types of immersion in the learning environment in various simulator interfaces are considered. The vulnerabilities of the 3D simulator are noted. The goal is to develop a 3D simulator for a press granulator operator. A solution of a set of tasks is proposed to achieve this goal. The plan for creating a simulator was developed. A detailed consideration of the development stages of the simulator is given. The possibilities of using the simulator being developed are considered. The possibility of developing a simulator of emergency situations is described. The relevance of this development is justified.

New C4D Sensor with a Simulated Inductor

Directory of Open Access Journals (Sweden)

Yingchao Lyu

2016-01-01

Full Text Available A new capacitively coupled contactless conductivity detection (C4D sensor with an improved simulated inductor is developed in this work. The improved simulated inductor is designed on the basis of the Riordan-type floating simulated inductor. With the improved simulated inductor, the negative influence of the coupling capacitances is overcome and the conductivity measurement is implemented by the series resonance principle. The conductivity measurement experiments are carried out in three pipes with different inner diameters of 3.0 mm, 4.6 mm and 6.4 mm, respectively. The experimental results show that the designs of the new C4D sensor and the improved simulated inductor are successful. The maximum relative error of the conductivity measurement is less than 5%. Compared with the C4D sensors using practical inductors, the measurement accuracy of the new C4D sensor is comparable. The research results also indicate that the adjustability of a simulated inductor can reduce the requirement for the AC source and guarantee the interchangeableness. Meanwhile, it is recommended that making the potential of one terminal of a simulated inductor stable is beneficial to the running stability. Furthermore, this work indirectly verifies the possibility and feasibility of the miniaturization of the C4D sensor by using the simulated inductor technique and lays a good foundation for future research work.

Estimating net surface shortwave radiation from Chinese geostationary meteorological satellite FengYun-2D (FY-2D) data under clear sky.

Science.gov (United States)

Zhang, Xiaoyu; Li, Lingling

2016-03-21

Net surface shortwave radiation (NSSR) significantly affects regional and global climate change, and is an important aspect of research on surface radiation budget balance. Many previous studies have proposed methods for estimating NSSR. This study proposes a method to calculate NSSR using FY-2D short-wave channel data. Firstly, a linear regression model is established between the top-of-atmosphere (TOA) broadband albedo (r) and the narrowband reflectivity (ρ1), based on data simulated with MODTRAN 4.2. Secondly, the relationship between surface absorption coefficient (as) and broadband albedo (r) is determined by dividing the surface type into land, sea, or snow&ice, and NSSR can then be calculated. Thirdly, sensitivity analysis is performed for errors associated with sensor noise, vertically integrated atmospheric water content, view zenith angle and solar zenith angle. Finally, validation using ground measurements is performed. Results show that the root mean square error (RMSE) between the estimated and actual r is less than 0.011 for all conditions, and the RMSEs between estimated and real NSSR are 26.60 W/m2, 9.99 W/m2, and 23.40 W/m2, using simulated data for land, sea, and snow&ice surfaces, respectively. This indicates that the proposed method can be used to adequately estimate NSSR. Additionally, we compare field measurements from TaiYuan and ChangWu ecological stations with estimates using corresponding FY-2D data acquired from January to April 2012, on cloud-free days. Results show that the RMSE between the estimated and actual NSSR is 48.56W/m2, with a mean error of -2.23W/m2. Causes of errors also include measurement accuracy and estimations of atmospheric water vertical contents. This method is only suitable for cloudless conditions.

Effects of multilayer snow scheme on the simulation of snow: Offline Noah and coupled with NCEP CFSv2

Science.gov (United States)

Saha, Subodh Kumar; Sujith, K.; Pokhrel, Samir; Chaudhari, Hemantkumar S.; Hazra, Anupam

2017-03-01

The Noah version 2.7.1 is a moderately complex land surface model (LSM), with a single layer snowpack, combined with vegetation and underlying soil layer. Many previous studies have pointed out biases in the simulation of snow, which may hinder the skill of a forecasting system coupled with the Noah. In order to improve the simulation of snow by the Noah, a multilayer snow scheme (up to a maximum of six layers) is introduced. As Noah is the land surface component of the Climate Forecast System version 2 (CFSv2) of the National Centers for Environmental Prediction (NCEP), the modified Noah is also coupled with the CFSv2. The offline LSM shows large improvements in the simulation of snow depth, snow water equivalent (SWE), and snow cover area during snow season (October to June). CFSv2 with the modified Noah reveals a dramatic improvements in the simulation of snow depth and 2 m air temperature and moderate improvements in SWE. As suggested in the previous diagnostic and sensitivity study, improvements in the simulation of snow by CFSv2 have lead to the reduction in dry bias over the Indian subcontinent (by a maximum of 2 mm d-1). The multilayer snow scheme shows promising results in the simulation of snow as well as Indian summer monsoon rainfall and hence this development may be the part of the future version of the CFS.

2-D CFD time-dependent thermal-hydraulic simulations of CANDU-6 moderator flows

Energy Technology Data Exchange (ETDEWEB)

Mehdi Zadeh, Foad [Department of Engineering Physics/Polytechnique Montréal, Montréal, QC (Canada); Étienne, Stéphane [Department of Mechanical Engineering/Polytechnique Montréal, Montréal, QC (Canada); Teyssedou, Alberto, E-mail: alberto.teyssedou@polymtl.ca [Department of Engineering Physics/Polytechnique Montréal, Montréal, QC (Canada)

2016-12-01

Highlights: • 2-D time-dependent CFD simulations of CANDU-6 moderator flows are presented. • A thermal-hydraulic code using thermal physical fluid properties is used. • The numerical approach and convergence is validated against available data. • Flow configurations are correlated using Richardson’s number. • Frequency components indicate moderator flow oscillations vs. Richardson numbers. - Abstract: The distribution of the fluid temperature and mass density of the moderator flow in CANDU-6 nuclear power reactors may affect the reactivity coefficient. For this reason, any possible moderator flow configuration and consequently the corresponding temperature distributions must be studied. In particular, the variations of the reactivity may result in major safety issues. For instance, excessive temperature excursions in the vicinity of the calandria tubes nearby local flow stagnation zones, may bring about partial boiling. Moreover, steady-state simulations have shown that for operating condition, intense buoyancy forces may be dominant, which can trigger a thermal stratification. Therefore, the numerical study of the time-dependent flow transition to such a condition, is of fundamental safety concern. Within this framework, this paper presents detailed time-dependent numerical simulations of CANDU-6 moderator flow for a wide range of flow conditions. To get a better insight of the thermal-hydraulic phenomena, the simulations were performed by covering long physical-time periods using an open-source code (Code-Saturne V3) developed by Électricité de France. The results show not only a region where the flow is characterized by coherent structures of flow fluctuations but also the existence of two limit cases where fluid oscillations disappear almost completely.

D2O-induced cell excitation

International Nuclear Information System (INIS)

Andjus, P.R.; Vucelic, D.

1990-01-01

The effects of deuterium oxide (D 2 O) on giant internodal cells of the fresh water alga Chara gymnophylla, were investigated. D 2 O causes membrane excitation followed by potassium leakage. The primary effect consists of an almost instantaneous membrane depolarization resembling an action potential with incomplete repolarization. A hypothesis was proposed which deals with an osmotic stress effect of D 2 O on membrane ion channels followed by the suppression of the electrogenic pump activity. The initial changes (potential spike and rapid K+ efflux) may represent the previously undetected link between the D 2 O-induced temporary arrest of protoplasmic streaming and the early events triggered at the plasma membrane level as the primary site of D 2 O action

Two-dimensional simulations of magnetically-driven instabilities

International Nuclear Information System (INIS)

Peterson, D.; Bowers, R.; Greene, A.E.; Brownell, J.

1986-01-01

A two-dimensional Eulerian MHD code is used to study the evolution of magnetically-driven instabilities in cylindrical geometry. The code incorporates an equation of state, resistivity, and radiative cooling model appropriate for an aluminum plasma. The simulations explore the effects of initial perturbations, electrical resistivity, and radiative cooling on the growth and saturation of the instabilities. Comparisons are made between the 2-D simulations, previous 1-D simulations, and results from the Pioneer experiments of the Los Alamos foil implosion program

The D2G2 project: a new software tool for nuclear engineering design in Canada

International Nuclear Information System (INIS)

Rheaume, P.; Lefebvre, J.F.; Roy, R.; Koclas, J.

2004-01-01

Nowadays, high quality neutronic simulation codes are readily available. The open source software suite DRAGON/DONJON is a good example. It is free, it has proven quality and correctness over the years and is still developed and maintained at Ecole Polytechnique de Montreal. However, most simulation codes have the following weaknesses: limited usability, poor maintainability, no internal data standardization and poor portability. The D2G2 project is a software development initiative which aims to create an upper layer software tool that annihilates the weakness of classic simulation codes. This paper presents D2G2Client's and D2G2Server's principal capabilities, how they interact and the libraries they use. (author)

Screening masses in quenched (2+1)d Yang-Mills theory: Universality from dynamics?

International Nuclear Information System (INIS)

Frigori, Rafael B.

2010-01-01

We compute the spectrum of gluonic screening-masses in the 0 ++ channel of quenched 3d Yang-Mills theory near the phase-transition. Our finite-temperature lattice simulations are performed at scaling region, using state-of-art techniques for thermalization and spectroscopy, which allows for thorough data extrapolations to thermodynamic limit. Ratios among mass-excitations with the same quantum numbers on the gauge theory, 2d Ising and λφ 4 models are compared, resulting in a nice agreement with predictions from universality. In addition, a gauge-to-scalar mapping, previously employed to fit QCD Green's functions at deep IR, is verified to dynamically describe these universal spectroscopic patterns.

Higher-Order Neural Networks Applied to 2D and 3D Object Recognition

Science.gov (United States)

Spirkovska, Lilly; Reid, Max B.

1994-01-01

A Higher-Order Neural Network (HONN) can be designed to be invariant to geometric transformations such as scale, translation, and in-plane rotation. Invariances are built directly into the architecture of a HONN and do not need to be learned. Thus, for 2D object recognition, the network needs to be trained on just one view of each object class, not numerous scaled, translated, and rotated views. Because the 2D object recognition task is a component of the 3D object recognition task, built-in 2D invariance also decreases the size of the training set required for 3D object recognition. We present results for 2D object recognition both in simulation and within a robotic vision experiment and for 3D object recognition in simulation. We also compare our method to other approaches and show that HONNs have distinct advantages for position, scale, and rotation-invariant object recognition. The major drawback of HONNs is that the size of the input field is limited due to the memory required for the large number of interconnections in a fully connected network. We present partial connectivity strategies and a coarse-coding technique for overcoming this limitation and increasing the input field to that required by practical object recognition problems.

Collaboration system for simulation using commercial Web3D

International Nuclear Information System (INIS)

Okamoto, Koji; Ohkubo, Kohei

2004-01-01

The Web-3D system has been widely used in the internet. It can show the 3D environment easily and friendly. In order to develop the network collaboration system, the Web-3D system is used as the front end of the visualization tool. The 3D geometries have been transferred from the server using HTTP with the viewpoint, one of the commercialized Web-3D. The simulation results are directly transferred to the client using the TCP/IP socket with JAVA. The viewpoint can be controlled by the JAVA, so the transferred simulation data are displayed on the web, in real-time. The multi-client system enables the visualization of the real-time simulation results with remote site. The same results are shown on the remote web site, simultaneously. This means the remote collaboration can be achievable for the real-time simulation. Also, the system has the feedback system, which control the simulation parameter remotely. In this prototype system, the key feature of the collaboration system are discussed using the viewpoint as the frontend. (author)

Pre-operative simulation of pediatric mastoid surgery with 3D-printed temporal bone models.

Science.gov (United States)

Rose, Austin S; Webster, Caroline E; Harrysson, Ola L A; Formeister, Eric J; Rawal, Rounak B; Iseli, Claire E

2015-05-01

As the process of additive manufacturing, or three-dimensional (3D) printing, has become more practical and affordable, a number of applications for the technology in the field of pediatric otolaryngology have been considered. One area of promise is temporal bone surgical simulation. Having previously developed a model for temporal bone surgical training using 3D printing, we sought to produce a patient-specific model for pre-operative simulation in pediatric otologic surgery. Our hypothesis was that the creation and pre-operative dissection of such a model was possible, and would demonstrate potential benefits in cases of abnormal temporal bone anatomy. In the case presented, an 11-year-old boy underwent a planned canal-wall-down (CWD) tympano-mastoidectomy for recurrent cholesteatoma preceded by a pre-operative surgical simulation using 3D-printed models of the temporal bone. The models were based on the child's pre-operative clinical CT scan and printed using multiple materials to simulate both bone and soft tissue structures. To help confirm the models as accurate representations of the child's anatomy, distances between various anatomic landmarks were measured and compared to the temporal bone CT scan and the 3D model. The simulation allowed the surgical team to appreciate the child's unusual temporal bone anatomy as well as any challenges that might arise in the safety of the temporal bone laboratory, prior to actual surgery in the operating room (OR). There was minimal variability, in terms of absolute distance (mm) and relative distance (%), in measurements between anatomic landmarks obtained from the patient intra-operatively, the pre-operative CT scan and the 3D-printed models. Accurate 3D temporal bone models can be rapidly produced based on clinical CT scans for pre-operative simulation of specific challenging otologic cases in children, potentially reducing medical errors and improving patient safety. Copyright © 2015 Elsevier Ireland Ltd. All rights

AUTOMATIC GENERATION OF ROAD INFRASTRUCTURE IN 3D FOR VEHICLE SIMULATORS

Directory of Open Access Journals (Sweden)

Adam Orlický

2017-12-01

Full Text Available One of the modern methods of testing new systems and interfaces in vehicles is testing in a vehicle simulator. Providing quality models of virtual scenes is one of tasks for driver-car interaction interface simulation. Nowadays, there exist many programs for creating 3D models of road infrastructures, but most of these programs are very expensive or canÂtt export models for the following use. Therefore, a plug-in has been developed at the Faculty of Transportation Sciences in Prague. It can generate road infrastructure by Czech standard for designing roads (CSN 73 6101. The uniqueness of this plug-in is that it is the first tool for generating road infrastructure in NURBS representation. This type of representation brings more exact models and allows to optimize transfer for creating quality models for vehicle simulators. The scenes created by this plug-in were tested on vehicle simulators. The results have shown that with newly created scenes drivers had a much better feeling in comparison to previous scenes.

A STUDY OF THE HELIOCENTRIC DEPENDENCE OF SHOCK STANDOFF DISTANCE AND GEOMETRY USING 2.5D MAGNETOHYDRODYNAMIC SIMULATIONS OF CORONAL MASS EJECTION DRIVEN SHOCKS

International Nuclear Information System (INIS)

Savani, N. P.; Shiota, D.; Kusano, K.; Vourlidas, A.; Lugaz, N.

2012-01-01

We perform four numerical magnetohydrodynamic simulations in 2.5 dimensions (2.5D) of fast coronal mass ejections (CMEs) and their associated shock fronts between 10 Rs and 300 Rs. We investigate the relative change in the shock standoff distance, Δ, as a fraction of the CME radial half-width, D OB (i.e., Δ/D OB ). Previous hydrodynamic studies have related the shock standoff distance for Earth's magnetosphere to the density compression ratio (DR; ρ u /ρ d ) measured across the bow shock. The DR coefficient, k dr , which is the proportionality constant between the relative standoff distance (Δ/D OB ) and the compression ratio, was semi-empirically estimated as 1.1. For CMEs, we show that this value varies linearly as a function of heliocentric distance and changes significantly for different radii of curvature of the CME's leading edge. We find that a value of 0.8 ± 0.1 is more appropriate for small heliocentric distances ( dr value increases linearly with heliocentric distance, such that k dr = 1.1 is most appropriate at a heliocentric distance of about 80 Rs. For terrestrial distances (215 Rs) we estimate k dr = 1.8 ± 0.3, which also indicates that the CME cross-sectional structure is generally more oblate than that of Earth's magnetosphere. These alterations to the proportionality coefficients may serve to improve investigations into the estimates of the magnetic field in the corona upstream of a CME as well as the aspect ratio of CMEs as measured in situ.

NASA-VOF2D, 2-D Transient Free Surface Incompressible Fluid Dynamic

International Nuclear Information System (INIS)

Torrey, M.D.

1988-01-01

1 - Description of program or function: NASA-VOF2D is a two- dimensional, transient, free surface incompressible fluid dynamics program. It allows multiple free surfaces with surface tension and wall adhesion forces and has a partial cell treatment which allows curved boundaries and interior obstacles. 2 - Method of solution: NASA-VOF2D simulates incompressible flows with free surfaces using the volume-of-fluid (VOF) algorithm. This technique is based on the use of donor-acceptor differencing to track the free surface across an Eulerian grid. The complete Navier-Stokes equations in primitive variables for an incompressible fluid are solved by finite differences with surface tension and wall adhesion included. Optionally the pressure equation can be solved by a conjugate residual method rather than the successive over-relaxation (SOR) method

Effective viscosity of 2D suspensions - Confinement effects

OpenAIRE

Doyeux , Vincent; Priem , Stephane; Jibuti , Levan; Farutin , Alexander; Ismail , Mourad; Peyla , Philippe

2016-01-01

International audience; We study the rheology of a sheared 2D suspension of non-Brownian disks in presence of walls. Although, it is of course possible today with modern computers and powerful algorithms to perform direct numerical simulations that fully account for multiparticle 3D interactions in the presence of walls, the analysis of the simple case of a 2D suspension, provides valuable insights and helps to understand 3D results. Thanks to the direct visualization of the whole 2D flow (th...

The computer simulation of 3d gas dynamics in a gas centrifuge

Science.gov (United States)

Borman, V. D.; Bogovalov, S. V.; Borisevich, V. D.; Tronin, I. V.; Tronin, V. N.

2016-09-01

We argue on the basis of the results of 2D analysis of the gas flow in gas centrifuges that a reliable calculation of the circulation of the gas and gas content in the gas centrifuge is possible only in frameworks of 3D numerical simulation of gas dynamics in the gas centrifuge (hereafter GC). The group from National research nuclear university, MEPhI, has created a computer code for 3D simulation of the gas flow in GC. The results of the computer simulations of the gas flows in GC are presented. A model Iguassu centrifuge is explored for the simulations. A nonaxisymmetric gas flow is produced due to interaction of the hypersonic rotating flow with the scoops for extraction of the product and waste flows from the GC. The scoops produce shock waves penetrating into a working camera of the GC and form spiral waves there.

The computer simulation of 3d gas dynamics in a gas centrifuge

International Nuclear Information System (INIS)

Borman, V D; Bogovalov, S V; Borisevich, V D; Tronin, I V; Tronin, V N

2016-01-01

We argue on the basis of the results of 2D analysis of the gas flow in gas centrifuges that a reliable calculation of the circulation of the gas and gas content in the gas centrifuge is possible only in frameworks of 3D numerical simulation of gas dynamics in the gas centrifuge (hereafter GC). The group from National research nuclear university, MEPhI, has created a computer code for 3D simulation of the gas flow in GC. The results of the computer simulations of the gas flows in GC are presented. A model Iguassu centrifuge is explored for the simulations. A nonaxisymmetric gas flow is produced due to interaction of the hypersonic rotating flow with the scoops for extraction of the product and waste flows from the GC. The scoops produce shock waves penetrating into a working camera of the GC and form spiral waves there. (paper)

GYRO Simulations of Core Momentum Transport in DIII-D and JET Plasmas

International Nuclear Information System (INIS)

Budny, R.V.; Candy, J.; Waltz, R.E.

2005-01-01

Momentum, energy, and particle transport in DIII-D and JET ELMy H-mode plasmas is simulated with GYRO and compared with measurements analyzed using TRANSP. The simulated transport depends sensitively on the nabla(T(sub)i) turbulence drive and the nabla(E(sub)r) turbulence suppression inputs. With their nominal values indicated by measurements, the simulations over-predict the momentum and energy transport in the DIII-D plasmas, and under-predict in the JET plasmas. Reducing |nabla(T(sub)i)| and increasing |nabla(E(sub)r)| by up to 15% leads to approximate agreement (within a factor of two) for the DIII-D cases. For the JET cases, increasing |nabla(T(sub)i)| or reducing |nabla(E(sub)r)| results in approximate agreement for the energy flow, but the ratio of the simulated energy and momentum flows remains higher than measurements by a factor of 2-4

Mechanics and composition of middle cerebral arteries from simulated microgravity rats with and without 1-h/d -Gx gravitation.

Directory of Open Access Journals (Sweden)

Jiu-Hua Cheng

Full Text Available BACKGROUND: To elucidate further from the biomechanical aspect whether microgravity-induced cerebral vascular mal-adaptation might be a contributing factor to postflight orthostatic intolerance and the underlying mechanism accounting for the potential effectiveness of intermittent artificial gravity (IAG in preventing this adverse effect. METHODOLOGY/PRINCIPAL FINDINGS: Middle cerebral arteries (MCAs were isolated from 28-day SUS (tail-suspended, head-down tilt rats to simulate microgravity effect, S+D (SUS plus 1-h/d -Gx gravitation by normal standing to simulate IAG, and CON (control rats. Vascular myogenic reactivity and circumferential stress-strain and axial force-pressure relationships and overall stiffness were examined using pressure arteriography and calculated. Acellular matrix components were quantified by electron microscopy. The results demonstrate that myogenic reactivity is susceptible to previous pressure-induced, serial constrictions. During the first-run of pressure increments, active MCAs from SUS rats can strongly stiffen their wall and maintain the vessels at very low strains, which can be prevented by the simulated IAG countermeasure. The strains are 0.03 and 0.14 respectively for SUS and S+D, while circumferential stress being kept at 0.5 (106 dyn/cm2. During the second-run pressure steps, both the myogenic reactivity and active stiffness of the three groups declined. The distensibility of passive MCAs from S+D is significantly higher than CON and SUS, which may help to attenuate the vasodilatation impairment at low levels of pressure. Collagen and elastin percentages were increased and decreased, respectively, in MCAs from SUS and S+D as compared with CON; however, elastin was higher in S+D than SUS rats. CONCLUSIONS: Susceptibility to previous myogenic constrictions seems to be a self-limiting protective mechanism in cerebral small resistance arteries to prevent undue cerebral vasoconstriction during orthostasis at 1-G

Assessment of array scintillation detector for follicle thyroid 2-d image acquisition using Monte Carlo simulation

International Nuclear Information System (INIS)

Silva, Carlos Borges da; Braz, Delson

2008-01-01

Full text: This work presents an innovative study to find out the adequate scintillation inorganic detector array to be used coupled to a specific light photo sensor, a charge coupled device (CCD), through a fiber optic plate. The goal is to choose the type of detector that fits a 2-dimensional imaging acquisition of a cell thyroid tissue application with high resolution and detection efficiency in order to map a follicle image using gamma radiation emission. A point or volumetric source-detector simulation by using a MCNP4B general code, considering different source energies, detector materials and geometry including pixel sizes and reflector types was performed. In this study, simulations were performed for 7 x 7, 31 x 31 and 127 x 127 arrays using CsI(Tl), BGO, CdWO 4 , LSO, GOS and GSO scintillation detectors with pixel dimensions ranging from 1 x 1 cm 2 to 10 x 10 μm 2 and radiation thickness ranging from 1 mm to 10 mm. The effect of all these parameters was investigated to find the best source-detector system that results in an image with the best contrast details. The results showed that it is possible to design a specific imaging system that allows searching for in-vitro studies, specifically in radiobiology applied to endocrine physiology. A 2D image of two thyroid follicles simulated by using MCNP4B code is shown

Effects of social reorganization on dopamine D2/D3 receptor availability and cocaine self-administration in male cynomolgus monkeys.

Science.gov (United States)

Czoty, P W; Gould, R W; Gage, H D; Nader, M A

2017-09-01

Studies have demonstrated that brain dopamine D2/D3 receptors (D2/D3R) and the reinforcing effects of cocaine can be influenced by a monkey's position in the social dominance hierarchy. In this study, we manipulated the social ranks of monkeys by reorganizing social groups and assessed effects on D2/D3R availability and cocaine self-administration. Male cynomolgus monkeys (N = 12) had been trained to self-administer cocaine under a concurrent cocaine-food reinforcement schedule. Previously, PET measures of D2/D3R availability in the caudate nucleus and putamen had been obtained with [ 18 F]fluoroclebopride during cocaine abstinence, while monkeys lived in stable social groups of four monkeys/pen. For this study, monkeys were reorganized into groups that consisted of (1) four previously dominant, (2) four previously subordinate, and (3) a mix of previously dominant and subordinate monkeys. After 3 months, D2/D3R availability was redetermined and cocaine self-administration was reexamined. D2/D3R availability significantly increased after reorganization in monkeys who were formerly subordinate, with the greatest increases observed in those that became dominant. No consistent changes in D2/D3R availability were observed in formerly dominant monkeys. Cocaine self-administration did not vary according to rank after reorganization of social groups. However, when compared to their previous cocaine self-administration data, the potency of cocaine as a reinforcer decreased in 9 of 11 monkeys. These results indicate that changing the social conditions can alter D2/D3R availability in subordinate monkeys in a manner suggestive of environmental enrichment. In most monkeys, social reorganization shifted the cocaine dose-response curve to the right, also consistent with environmental enrichment.

RTS amplitudes in decananometer MOSFETs: 3-D simulation study

OpenAIRE

Asenov, A.; Balasubramaniam, R.; Brown, A.R.; Davies, J.H.

2003-01-01

In this paper we study the amplitudes of random telegraph signals (RTS) associated with the trapping of a single electron in defect states at the Si/SiO/sub 2/ interface of sub-100-nm (decananometer) MOSFETs employing three-dimensional (3-D) "atomistic" simulations. Both continuous doping charge and random discrete dopants in the active region of the MOSFETs are considered in the simulations. The dependence of the RTS amplitudes on the position of the trapped charge in the channel and on devi...

Simulating the 3-D Structure of Titan's Upper Atmosphere

Science.gov (United States)

Bell, J. M.; Waite, H.; Westlake, J.; Magee, B.

2009-05-01

We present results from the 3-D Titan Global Ionosphere-Thermosphere Model (Bell et al [2009], PSS, in review). We show comparisons between simulated N2, CH4, and H2 density fields and the in-situ data from the Cassini Ion Neutral Mass Spectrometer (INMS). We describe the temperature and wind fields consistent with these density calculations. Variations with local time, longitude, and latitude will be addressed. Potential plasma heating sources can be estimated using the 1-D model of De La Haye et al [2007, 2008] and the impacts on the thermosphere of Titan can be assessed in a global sense in Titan-GITM. Lastly, we will place these findings within the context of recent work in modeling the 2-D structure of Titan's upper atmosphere (Mueller-Wodarg et al [2008]).

The SH2D2A gene and susceptibility to multiple sclerosis

DEFF Research Database (Denmark)

Lorentzen, A.R.; Smestad, C.; Lie, B.A.

2008-01-01

We previously reported an association between the SH2D2A gene encoding TSAd and multiple sclerosis (MS). Here a total of 2128 Nordic MS patients and 2004 controls were genotyped for the SH2D2A promoter GA repeat polymorphism and rs926103 encoding a serine to asparagine substitution at amino acid...... that the SH2D2A gene may contribute to susceptibility to MS Udgivelsesdato: 2008/7/15...

Performance evaluation of corrosion probes in simulated WVNS tank 8D-2 waste: WVNS tank farm process support

International Nuclear Information System (INIS)

Elmore, M.R.

1994-07-01

Five corrosion probes were received from West Valley Nuclear Services for evaluation in simulated tank 8D-2 3rd-stage sludge wash slurry. The same waste slurry simulated was also used in a series of ongoing corrosion studies assessing the effects of in-tank sludge washing on the integrity of tank 8D-2. Two of the corrosion probes were installed in the coupon corrosion test vessels operating at ∼150 degrees F to compare performance of the probes with that observed by coupon tests conducted in the same vessels. Corrosion rate data calculated from electrical resistance measurements of the corrosion probes were evaluated for this study using two slightly different approaches. One approach uses the total length of exposure of the probe to give a ''time-averaged'' value of the corrosion rate. The other approach uses a shorter period of time (relative to the length of the test) in the calculation of corrosion rate, and is referred to as the ''instantaneous'' rate. The interpretation of the probe data and the implications of corrosion rates calculated with either of these methods are discussed in this report

Pore-scale observation and 3D simulation of wettability effects on supercritical CO2 - brine immiscible displacement in drainage

Science.gov (United States)

Hu, R.; Wan, J.; Chen, Y.

2016-12-01

Wettability is a factor controlling the fluid-fluid displacement pattern in porous media and significantly affects the flow and transport of supercritical (sc) CO2 in geologic carbon sequestration. Using a high-pressure micromodel-microscopy system, we performed drainage experiments of scCO2 invasion into brine-saturated water-wet and intermediate-wet micromodels; we visualized the scCO2 invasion morphology at pore-scale under reservoir conditions. We also performed pore-scale numerical simulations of the Navier-Stokes equations to obtain 3D details of fluid-fluid displacement processes. Simulation results are qualitatively consistent with the experiments, showing wider scCO2 fingering, higher percentage of scCO2 and more compact displacement pattern in intermediate-wet micromodel. Through quantitative analysis based on pore-scale simulation, we found that the reduced wettability reduces the displacement front velocity, promotes the pore-filling events in the longitudinal direction, delays the breakthrough time of invading fluid, and then increases the displacement efficiency. Simulated results also show that the fluid-fluid interface area follows a unified power-law relation with scCO2 saturation, and show smaller interface area in intermediate-wet case which suppresses the mass transfer between the phases. These pore-scale results provide insights for the wettability effects on CO2 - brine immiscible displacement in geologic carbon sequestration.

A translator and simulator for the Burroughs D machine

Science.gov (United States)

Roberts, J.

1972-01-01

The D Machine is described as a small user microprogrammable computer designed to be a versatile building block for such diverse functions as: disk file controllers, I/O controllers, and emulators. TRANSLANG is an ALGOL-like language, which allows D Machine users to write microprograms in an English-like format as opposed to creating binary bit pattern maps. The TRANSLANG translator parses TRANSLANG programs into D Machine microinstruction bit patterns which can be executed on the D Machine simulator. In addition to simulation and translation, the two programs also offer several debugging tools, such as: a full set of diagnostic error messages, register dumps, simulated memory dumps, traces on instructions and groups of instructions, and breakpoints.

Identification of novel CYP2D7-2D6 hybrids: non-functional and functional variants

Directory of Open Access Journals (Sweden)

Andrea Gaedigk

2010-10-01

Full Text Available Polymorphic expression of CYP2D6 contributes to the wide range of activity observed for this clinically important drug metabolizing enzyme. In this report we describe novel CYP2D7/2D6 hybrid genes encoding non-functional and functional CYP2D6 protein and a CYP2D7 variant that mimics a CYP2D7/2D6 hybrid gene. Five kb long PCR products encompassing the novel genes were entirely sequenced. A quantitative assay probing in different gene regions was employed to determine CYP2D6 and 2D7 copy number variations and the relative position of the hybrid genes within the locus was assessed by long-range PCR. In addition to the previously known CYP2D6*13 and *66 hybrids, we describe three novel non-functional CYP2D7-2D6 hybrids with gene switching in exon 2 (CYP2D6*79, intron 2 (CYP2D6*80 and intron 5 (CYP2D6*67. A CYP2D7-specific T-ins in exon 1 causes a detrimental frame shift. One subject revealed a CYP2D7 conversion in the 5’-flanking region of a CYP2D6*35 allele, was otherwise unaffected (designated CYP2D6*35B. Finally, three DNAs revealed a CYP2D7 gene with a CYP2D6-like region downstream of exon 9 (designated CYP2D7[REP6]. Quantitative copy number determination, sequence analyses and long-range PCR mapping were in agreement and excluded the presence of additional gene units. Undetected hybrid genes may cause over-estimation of CYP2D6 activity (CYP2D6*1/*1 vs *1/hybrid, etc, but may also cause results that may interfere with the genotype determination. Detection of hybrid events, ‘single’ and tandem, will contribute to more accurate phenotype prediction from genotype data.

2D simulation and performance evaluation of bifacial rear local contact c-Si solar cells under variable illumination conditions

KAUST Repository

Katsaounis, Theodoros; Kotsovos, Konstantinos; Gereige, Issam; Al-Saggaf, Ahmed; Tzavaras, Athanasios

2017-01-01

A customized 2D computational tool has been developed to simulate bifacial rear local contact PERC type PV structures based on the numerical solution of the transport equations through the finite element method. Simulations were performed under various device material parameters and back contact geometry configurations in order to optimize bifacial solar cell performance under different simulated illumination conditions. Bifacial device maximum power output was also compared with the monofacial equivalent one and the industrial standard Al-BSF structure. The performance of the bifacial structure during highly diffused irradiance conditions commonly observed in the Middle East region due to high concentrations of airborne dust particles was also investigated. Simulation results demonstrated that such conditions are highly favorable for the bifacial device because of the significantly increased diffuse component of the solar radiation which enters the back cell surface.

2D simulation and performance evaluation of bifacial rear local contact c-Si solar cells under variable illumination conditions

KAUST Repository

Katsaounis, Theodoros

2017-09-18

A customized 2D computational tool has been developed to simulate bifacial rear local contact PERC type PV structures based on the numerical solution of the transport equations through the finite element method. Simulations were performed under various device material parameters and back contact geometry configurations in order to optimize bifacial solar cell performance under different simulated illumination conditions. Bifacial device maximum power output was also compared with the monofacial equivalent one and the industrial standard Al-BSF structure. The performance of the bifacial structure during highly diffused irradiance conditions commonly observed in the Middle East region due to high concentrations of airborne dust particles was also investigated. Simulation results demonstrated that such conditions are highly favorable for the bifacial device because of the significantly increased diffuse component of the solar radiation which enters the back cell surface.

A pseudo-spectral method for the simulation of poro-elastic seismic wave propagation in 2D polar coordinates using domain decomposition

Energy Technology Data Exchange (ETDEWEB)

Sidler, Rolf, E-mail: rsidler@gmail.com [Center for Research of the Terrestrial Environment, University of Lausanne, CH-1015 Lausanne (Switzerland); Carcione, José M. [Istituto Nazionale di Oceanografia e di Geofisica Sperimentale (OGS), Borgo Grotta Gigante 42c, 34010 Sgonico, Trieste (Italy); Holliger, Klaus [Center for Research of the Terrestrial Environment, University of Lausanne, CH-1015 Lausanne (Switzerland)

2013-02-15

We present a novel numerical approach for the comprehensive, flexible, and accurate simulation of poro-elastic wave propagation in 2D polar coordinates. An important application of this method and its extensions will be the modeling of complex seismic wave phenomena in fluid-filled boreholes, which represents a major, and as of yet largely unresolved, computational problem in exploration geophysics. In view of this, we consider a numerical mesh, which can be arbitrarily heterogeneous, consisting of two or more concentric rings representing the fluid in the center and the surrounding porous medium. The spatial discretization is based on a Chebyshev expansion in the radial direction and a Fourier expansion in the azimuthal direction and a Runge–Kutta integration scheme for the time evolution. A domain decomposition method is used to match the fluid–solid boundary conditions based on the method of characteristics. This multi-domain approach allows for significant reductions of the number of grid points in the azimuthal direction for the inner grid domain and thus for corresponding increases of the time step and enhancements of computational efficiency. The viability and accuracy of the proposed method has been rigorously tested and verified through comparisons with analytical solutions as well as with the results obtained with a corresponding, previously published, and independently benchmarked solution for 2D Cartesian coordinates. Finally, the proposed numerical solution also satisfies the reciprocity theorem, which indicates that the inherent singularity associated with the origin of the polar coordinate system is adequately handled.

Training toward Advanced 3D Seismic Methods for CO2 Monitoring, Verification, and Accounting

Energy Technology Data Exchange (ETDEWEB)

Christopher Liner

2012-05-31

The objective of our work is graduate and undergraduate student training related to improved 3D seismic technology that addresses key challenges related to monitoring movement and containment of CO{sub 2}, specifically better quantification and sensitivity for mapping of caprock integrity, fractures, and other potential leakage pathways. We utilize data and results developed through previous DOE-funded CO{sub 2} characterization project (DE-FG26-06NT42734) at the Dickman Field of Ness County, KS. Dickman is a type locality for the geology that will be encountered for CO{sub 2} sequestration projects from northern Oklahoma across the U.S. midcontinent to Indiana and Illinois. Since its discovery in 1962, the Dickman Field has produced about 1.7 million barrels of oil from porous Mississippian carbonates with a small structural closure at about 4400 ft drilling depth. Project data includes 3.3 square miles of 3D seismic data, 142 wells, with log, some core, and oil/water production data available. Only two wells penetrate the deep saline aquifer. In a previous DOE-funded project, geological and seismic data were integrated to create a geological property model and a flow simulation grid. We believe that sequestration of CO{sub 2} will largely occur in areas of relatively flat geology and simple near surface, similar to Dickman. The challenge is not complex geology, but development of improved, lower-cost methods for detecting natural fractures and subtle faults. Our project used numerical simulation to test methods of gathering multicomponent, full azimuth data ideal for this purpose. Our specific objectives were to apply advanced seismic methods to aide in quantifying reservoir properties and lateral continuity of CO{sub 2} sequestration targets. The purpose of the current project is graduate and undergraduate student training related to improved 3D seismic technology that addresses key challenges related to monitoring movement and containment of CO{sub 2

Sub-Millimeter T2 Weighted fMRI at 7 T: Comparison of 3D-GRASE and 2D SE-EPI

Directory of Open Access Journals (Sweden)

Valentin G. Kemper

2015-05-01

Full Text Available Functional magnetic resonance imaging (fMRI allows studying human brain function non-invasively up to the spatial resolution of cortical columns and layers. Most fMRI acquisitions rely on the blood oxygenation level dependent (BOLD contrast employing T2* weighted 2D multi-slice echo-planar imaging (EPI. At ultra-high magnetic field (i.e. 7 T and above, it has been shown experimentally and by simulation, that T2 weighted acquisitions yield a signal that is spatially more specific to the site of neuronal activity at the cost of functional sensitivity. This study compared two T2 weighted imaging sequences, inner-volume 3D Gradient-and-Spin-Echo (3D-GRASE and 2D Spin-Echo EPI (SE-EPI, with evaluation of their imaging point-spread function, functional specificity, and functional sensitivity at sub-millimeter resolution. Simulations and measurements of the imaging point-spread function revealed that the strongest anisotropic blurring in 3D-GRASE (along the second phase-encoding direction was about 60 % higher than the strongest anisotropic blurring in 2D SE-EPI (along the phase-encoding direction In a visual paradigm, the BOLD sensitivity of 3D-GRASE was found to be superior due to its higher temporal signal-to-noise ratio. High resolution cortical depth profiles suggested that the contrast mechanisms are similar between the two sequences, however, 2D SE-EPI had a higher surface bias owing to the higher T2* contribution of the longer in-plane EPI echo-train for full field of view compared to the reduced field of view of zoomed 3D-GRASE.

3D Model Optimization of Four-Facet Drill for 3D Drilling Simulation

Directory of Open Access Journals (Sweden)

Buranský Ivan

2016-09-01

Full Text Available The article is focused on optimization of four-facet drill for 3D drilling numerical modelling. For optimization, the process of reverse engineering by PowerShape software was used. The design of four-facet drill was created in NumrotoPlus software. The modified 3D model of the drill was used in the numerical analysis of cutting forces. Verification of the accuracy of 3D models for reverse engineering was implemented using the colour deviation maps. The CAD model was in the STEP format. For simulation software, 3D model in the STEP format is ideal. STEP is a solid model. Simulation software automatically splits the 3D model into finite elements. The STEP model was therefore more suitable than the STL model.

Generating classes of 3D virtual mandibles for AR-based medical simulation.

Science.gov (United States)

Hippalgaonkar, Neha R; Sider, Alexa D; Hamza-Lup, Felix G; Santhanam, Anand P; Jaganathan, Bala; Imielinska, Celina; Rolland, Jannick P

2008-01-01

Simulation and modeling represent promising tools for several application domains from engineering to forensic science and medicine. Advances in 3D imaging technology convey paradigms such as augmented reality (AR) and mixed reality inside promising simulation tools for the training industry. Motivated by the requirement for superimposing anatomically correct 3D models on a human patient simulator (HPS) and visualizing them in an AR environment, the purpose of this research effort was to develop and validate a method for scaling a source human mandible to a target human mandible within a 2 mm root mean square (RMS) error. Results show that, given a distance between 2 same landmarks on 2 different mandibles, a relative scaling factor may be computed. Using this scaling factor, results show that a 3D virtual mandible model can be made morphometrically equivalent to a real target-specific mandible within a 1.30 mm RMS error. The virtual mandible may be further used as a reference target for registering other anatomic models, such as the lungs, on the HPS. Such registration will be made possible by physical constraints among the mandible and the spinal column in the horizontal normal rest position.

Simulating streamer discharges in 3D with the parallel adaptive Afivo framework

NARCIS (Netherlands)

H.J. Teunissen (Jannis); U. M. Ebert (Ute)

2017-01-01

htmlabstractWe present an open-source plasma fluid code for 2D, cylindrical and 3D simulations of streamer discharges, based on the Afivo framework that features adaptive mesh refinement, geometric multigrid methods for Poisson's equation, and OpenMP parallelism. We describe the numerical

Flow MRI simulation in complex 3D geometries: Application to the cerebral venous network.

Science.gov (United States)

Fortin, Alexandre; Salmon, Stéphanie; Baruthio, Joseph; Delbany, Maya; Durand, Emmanuel

2018-02-05

Develop and evaluate a complete tool to include 3D fluid flows in MRI simulation, leveraging from existing software. Simulation of MR spin flow motion is of high interest in the study of flow artifacts and angiography. However, at present, only a few simulators include this option and most are restricted to static tissue imaging. An extension of JEMRIS, one of the most advanced high performance open-source simulation platforms to date, was developed. The implementation of a Lagrangian description of the flow allows simulating any MR experiment, including both static tissues and complex flow data from computational fluid dynamics. Simulations of simple flow models are compared with real experiments on a physical flow phantom. A realistic simulation of 3D flow MRI on the cerebral venous network is also carried out. Simulations and real experiments are in good agreement. The generality of the framework is illustrated in 2D and 3D with some common flow artifacts (misregistration and inflow enhancement) and with the three main angiographic techniques: phase contrast velocimetry (PC), time-of-flight, and contrast-enhanced imaging MRA. The framework provides a versatile and reusable tool for the simulation of any MRI experiment including physiological fluids and arbitrarily complex flow motion. © 2018 International Society for Magnetic Resonance in Medicine.

Molecular dynamics modeling and simulation of void growth in two dimensions

Science.gov (United States)

Chang, H.-J.; Segurado, J.; Rodríguez de la Fuente, O.; Pabón, B. M.; LLorca, J.

2013-10-01

The mechanisms of growth of a circular void by plastic deformation were studied by means of molecular dynamics in two dimensions (2D). While previous molecular dynamics (MD) simulations in three dimensions (3D) have been limited to small voids (up to ≈10 nm in radius), this strategy allows us to study the behavior of voids of up to 100 nm in radius. MD simulations showed that plastic deformation was triggered by the nucleation of dislocations at the atomic steps of the void surface in the whole range of void sizes studied. The yield stress, defined as stress necessary to nucleate stable dislocations, decreased with temperature, but the void growth rate was not very sensitive to this parameter. Simulations under uniaxial tension, uniaxial deformation and biaxial deformation showed that the void growth rate increased very rapidly with multiaxiality but it did not depend on the initial void radius. These results were compared with previous 3D MD and 2D dislocation dynamics simulations to establish a map of mechanisms and size effects for plastic void growth in crystalline solids.

Molecular dynamics modeling and simulation of void growth in two dimensions

International Nuclear Information System (INIS)

Chang, H-J; Segurado, J; LLorca, J; Rodríguez de la Fuente, O; Pabón, B M

2013-01-01

The mechanisms of growth of a circular void by plastic deformation were studied by means of molecular dynamics in two dimensions (2D). While previous molecular dynamics (MD) simulations in three dimensions (3D) have been limited to small voids (up to ≈10 nm in radius), this strategy allows us to study the behavior of voids of up to 100 nm in radius. MD simulations showed that plastic deformation was triggered by the nucleation of dislocations at the atomic steps of the void surface in the whole range of void sizes studied. The yield stress, defined as stress necessary to nucleate stable dislocations, decreased with temperature, but the void growth rate was not very sensitive to this parameter. Simulations under uniaxial tension, uniaxial deformation and biaxial deformation showed that the void growth rate increased very rapidly with multiaxiality but it did not depend on the initial void radius. These results were compared with previous 3D MD and 2D dislocation dynamics simulations to establish a map of mechanisms and size effects for plastic void growth in crystalline solids. (paper)

A Novel Temporal Bone Simulation Model Using 3D Printing Techniques.

Science.gov (United States)

Mowry, Sarah E; Jammal, Hachem; Myer, Charles; Solares, Clementino Arturo; Weinberger, Paul

2015-09-01

An inexpensive temporal bone model for use in a temporal bone dissection laboratory setting can be made using a commercially available, consumer-grade 3D printer. Several models for a simulated temporal bone have been described but use commercial-grade printers and materials to produce these models. The goal of this project was to produce a plastic simulated temporal bone on an inexpensive 3D printer that recreates the visual and haptic experience associated with drilling a human temporal bone. Images from a high-resolution CT of a normal temporal bone were converted into stereolithography files via commercially available software, with image conversion and print settings adjusted to achieve optimal print quality. The temporal bone model was printed using acrylonitrile butadiene styrene (ABS) plastic filament on a MakerBot 2x 3D printer. Simulated temporal bones were drilled by seven expert temporal bone surgeons, assessing the fidelity of the model as compared with a human cadaveric temporal bone. Using a four-point scale, the simulated bones were assessed for haptic experience and recreation of the temporal bone anatomy. The created model was felt to be an accurate representation of a human temporal bone. All raters felt strongly this would be a good training model for junior residents or to simulate difficult surgical anatomy. Material cost for each model was $1.92. A realistic, inexpensive, and easily reproducible temporal bone model can be created on a consumer-grade desktop 3D printer.

2D Relativistic MHD simulations of the Kruskal-Schwarzschild instability in a relativistic striped wind

Science.gov (United States)

Gill, Ramandeep; Granot, Jonathan; Lyubarsky, Yuri

2018-03-01

We study the linear and non-linear development of the Kruskal-Schwarzchild instability in a relativisitically expanding striped wind. This instability is the generalization of Rayleigh-Taylor instability in the presence of a magnetic field. It has been suggested to produce a self-sustained acceleration mechanism in strongly magnetized outflows found in active galactic nuclei, gamma-ray bursts, and micro-quasars. The instability leads to magnetic reconnection, but in contrast with steady-state Sweet-Parker reconnection, the dissipation rate is not limited by the current layer's small aspect ratio. We performed two-dimensional (2D) relativistic magnetohydrodynamic (RMHD) simulations featuring two cold and highly magnetized (1 ≤ σ ≤ 103) plasma layers with an anti-parallel magnetic field separated by a thin layer of relativistically hot plasma with a local effective gravity induced by the outflow's acceleration. Our simulations show how the heavier relativistically hot plasma in the reconnecting layer drips out and allows oppositely oriented magnetic field lines to reconnect. The instability's growth rate in the linear regime matches the predictions of linear stability analysis. We find turbulence rather than an ordered bulk flow near the reconnection region, with turbulent velocities up to ˜0.1c, largely independent of model parameters. However, the magnetic energy dissipation rate is found to be much slower, corresponding to an effective ordered bulk velocity inflow into the reconnection region vin = βinc of 10-3 ≲ βin ≲ 5 × 10-3. This occurs due to the slow evacuation of hot plasma from the current layer, largely because of the Kelvin-Helmholtz instability experienced by the dripping plasma. 3D RMHD simulations are needed to further investigate the non-linear regime.

Pulse Propagation Effects in Optical 2D Fourier-Transform Spectroscopy: Theory.

Science.gov (United States)

Spencer, Austin P; Li, Hebin; Cundiff, Steven T; Jonas, David M

2015-04-30

A solution to Maxwell's equations in the three-dimensional frequency domain is used to calculate rephasing two-dimensional Fourier transform (2DFT) spectra of the D2 line of atomic rubidium vapor in argon buffer gas. Experimental distortions from the spatial propagation of pulses through the sample are simulated in 2DFT spectra calculated for the homogeneous Bloch line shape model. Spectral features that appear at optical densities of up to 3 are investigated. As optical density increases, absorptive and dispersive distortions start with peak shape broadening, progress to peak splitting, and ultimately result in a previously unexplored coherent transient twisting of the split peaks. In contrast to the low optical density limit, where the 2D peak shape for the Bloch model depends only on the total dephasing time, these distortions of the 2D peak shape at finite optical density vary with the waiting time and the excited state lifetime through coherent transient effects. Experiment-specific conditions are explored, demonstrating the effects of varying beam overlap within the sample and of pseudo-time domain filtering. For beam overlap starting at the sample entrance, decreasing the length of beam overlap reduces the line width along the ωτ axis but also reduces signal intensity. A pseudo-time domain filter, where signal prior to the center of the last excitation pulse is excluded from the FID-referenced 2D signal, reduces propagation distortions along the ωt axis. It is demonstrated that 2DFT rephasing spectra cannot take advantage of an excitation-detection transformation that can eliminate propagation distortions in 2DFT relaxation spectra. Finally, the high optical density experimental 2DFT spectrum of rubidium vapor in argon buffer gas [J. Phys. Chem. A 2013, 117, 6279-6287] is quantitatively compared, in line width, in depth of peak splitting, and in coherent transient peak twisting, to a simulation with optical density higher than that reported.

Numerical simulation of nonstationary dissipative structures in 3D double-diffusive convection at large Rayleigh numbers

Science.gov (United States)

Kozitskiy, Sergey

2018-05-01

Numerical simulation of nonstationary dissipative structures in 3D double-diffusive convection has been performed by using the previously derived system of complex Ginzburg-Landau type amplitude equations, valid in a neighborhood of Hopf bifurcation points. Simulation has shown that the state of spatiotemporal chaos develops in the system. It has the form of nonstationary structures that depend on the parameters of the system. The shape of structures does not depend on the initial conditions, and a limited number of spectral components participate in their formation.

A hybrid Boundary Element Unstructured Transmission-line (BEUT) method for accurate 2D electromagnetic simulation

Energy Technology Data Exchange (ETDEWEB)

Simmons, Daniel, E-mail: daniel.simmons@nottingham.ac.uk; Cools, Kristof; Sewell, Phillip

2016-11-01

Time domain electromagnetic simulation tools have the ability to model transient, wide-band applications, and non-linear problems. The Boundary Element Method (BEM) and the Transmission Line Modeling (TLM) method are both well established numerical techniques for simulating time-varying electromagnetic fields. The former surface based method can accurately describe outwardly radiating fields from piecewise uniform objects and efficiently deals with large domains filled with homogeneous media. The latter volume based method can describe inhomogeneous and non-linear media and has been proven to be unconditionally stable. Furthermore, the Unstructured TLM (UTLM) enables modelling of geometrically complex objects by using triangular meshes which removes staircasing and unnecessary extensions of the simulation domain. The hybridization of BEM and UTLM which is described in this paper is named the Boundary Element Unstructured Transmission-line (BEUT) method. It incorporates the advantages of both methods. The theory and derivation of the 2D BEUT method is described in this paper, along with any relevant implementation details. The method is corroborated by studying its correctness and efficiency compared to the traditional UTLM method when applied to complex problems such as the transmission through a system of Luneburg lenses and the modelling of antenna radomes for use in wireless communications. - Graphical abstract:.

3-D FDTD simulation of shear waves for evaluation of complex modulus imaging.

Science.gov (United States)

Orescanin, Marko; Wang, Yue; Insana, Michael

2011-02-01

The Navier equation describing shear wave propagation in 3-D viscoelastic media is solved numerically with a finite differences time domain (FDTD) method. Solutions are formed in terms of transverse scatterer velocity waves and then verified via comparison to measured wave fields in heterogeneous hydrogel phantoms. The numerical algorithm is used as a tool to study the effects on complex shear modulus estimation from wave propagation in heterogeneous viscoelastic media. We used an algebraic Helmholtz inversion (AHI) technique to solve for the complex shear modulus from simulated and experimental velocity data acquired in 2-D and 3-D. Although 3-D velocity estimates are required in general, there are object geometries for which 2-D inversions provide accurate estimations of the material properties. Through simulations and experiments, we explored artifacts generated in elastic and dynamic-viscous shear modulus images related to the shear wavelength and average viscosity.

SU-D-9A-03: STAMP: Simulator for Texture Analysis in MRI/PET

Energy Technology Data Exchange (ETDEWEB)

Laberge, S; Vallieres, M; Levesque, I R.; El Naqa, I [McGill University, Montreal, QC (Canada)

2014-06-01

Purpose: To develop a convenient simulation platform to facilitate PET/MR image analysis with the prospect of gaining a better understanding of the influence of acquisition parameters on PET/MRI textural features. The simulation platform is demonstrated by showing textural variations of a representative case study using different image acquisition parameters. Methods: The simulation platform is composed of MRI simulators JEMRIS and SIMRI to achieve simulations of customized MRI sequences on sample tumor models. The PET simulator GATE is used to get 2D and 3D Monte Carlo acquisitions of voxelized PET sources using a phantom geometry and a customized scanner architecture. The platform incorporates a series of graphical user interfaces written in Matlab. Two GUIs are used to facilitate communication with the simulation executables installed on a computer cluster. A third GUI is used to collect and display the clinical and simulated images, as well as fused PET/MRI images, and perform computation of textural features.To illustrate the capabilities of this platform, one FDG-PET and T1-weighted (T1w) digitized tumor models were generated from clinical images of a soft-tissue sarcoma patient. Numerically simulated MR images were produced using 3 different echo times (TE) and 5 different repetition times (TR). PET 2D images were simulated using an OSEM algorithm with 1 to 32 iterations and a post-reconstruction Gaussian filter of 0, 2, 4 or 6 mm width. Results: STAMP was successfully used to produce numerically simulated FDG-PET and MRI images, and to calculate their corresponding textures. Three typical textures (GLCM-Contrast, GLSZM-ZSV and NGTDM-Coarseness) were found to vary by a range of 45% on average compared to reference scanning conditions in the case of FDG-PET, and by a range of 40% in the case of T1w MRI. Conclusion: We have successfully developed a Matlab-based simulation platform to facilitate PET/MRI texture image analysis for outcome prediction.

Magneto-Hydrodynamic Simulations of a Magnetic Flux Compression Generator Using ALE3D

Science.gov (United States)

2017-07-01

3 Fig. 3 Half- plane view of the geometry used in ALE3D simulation showing the materials...to LLNL’s SESAME data.8 Fig. 3 Half- plane view of the geometry used in ALE3D simulation showing the materials There are 2 broad approaches to...of mesh can be time- consuming . Since MFCGs have a cylindrical geometry, a high-resolution mesh is not required; one can use a conformal mesh and

4D dose simulation in volumetric arc therapy: Accuracy and affecting parameters

Science.gov (United States)

Werner, René

2017-01-01

Radiotherapy of lung and liver lesions has changed from normofractioned 3D-CRT to stereotactic treatment in a single or few fractions, often employing volumetric arc therapy (VMAT)-based techniques. Potential unintended interference of respiratory target motion and dynamically changing beam parameters during VMAT dose delivery motivates establishing 4D quality assurance (4D QA) procedures to assess appropriateness of generated VMAT treatment plans when taking into account patient-specific motion characteristics. Current approaches are motion phantom-based 4D QA and image-based 4D VMAT dose simulation. Whereas phantom-based 4D QA is usually restricted to a small number of measurements, the computational approaches allow simulating many motion scenarios. However, 4D VMAT dose simulation depends on various input parameters, influencing estimated doses along with mitigating simulation reliability. Thus, aiming at routine use of simulation-based 4D VMAT QA, the impact of such parameters as well as the overall accuracy of the 4D VMAT dose simulation has to be studied in detail–which is the topic of the present work. In detail, we introduce the principles of 4D VMAT dose simulation, identify influencing parameters and assess their impact on 4D dose simulation accuracy by comparison of simulated motion-affected dose distributions to corresponding dosimetric motion phantom measurements. Exploiting an ITV-based treatment planning approach, VMAT treatment plans were generated for a motion phantom and different motion scenarios (sinusoidal motion of different period/direction; regular/irregular motion). 4D VMAT dose simulation results and dose measurements were compared by local 3% / 3 mm γ-evaluation, with the measured dose distributions serving as ground truth. Overall γ-passing rates of simulations and dynamic measurements ranged from 97% to 100% (mean across all motion scenarios: 98% ± 1%); corresponding values for comparison of different day repeat measurements were

Using 3D spatial correlations to improve the noise robustness of multi component analysis of 3D multi echo quantitative T2 relaxometry data.

Science.gov (United States)

Kumar, Dushyant; Hariharan, Hari; Faizy, Tobias D; Borchert, Patrick; Siemonsen, Susanne; Fiehler, Jens; Reddy, Ravinder; Sedlacik, Jan

2018-05-12

We present a computationally feasible and iterative multi-voxel spatially regularized algorithm for myelin water fraction (MWF) reconstruction. This method utilizes 3D spatial correlations present in anatomical/pathological tissues and underlying B1 + -inhomogeneity or flip angle inhomogeneity to enhance the noise robustness of the reconstruction while intrinsically accounting for stimulated echo contributions using T2-distribution data alone. Simulated data and in vivo data acquired using 3D non-selective multi-echo spin echo (3DNS-MESE) were used to compare the reconstruction quality of the proposed approach against those of the popular algorithm (the method by Prasloski et al.) and our previously proposed 2D multi-slice spatial regularization spatial regularization approach. We also investigated whether the inter-sequence correlations and agreements improved as a result of the proposed approach. MWF-quantifications from two sequences, 3DNS-MESE vs 3DNS-gradient and spin echo (3DNS-GRASE), were compared for both reconstruction approaches to assess correlations and agreements between inter-sequence MWF-value pairs. MWF values from whole-brain data of six volunteers and two multiple sclerosis patients are being reported as well. In comparison with competing approaches such as Prasloski's method or our previously proposed 2D multi-slice spatial regularization method, the proposed method showed better agreements with simulated truths using regression analyses and Bland-Altman analyses. For 3DNS-MESE data, MWF-maps reconstructed using the proposed algorithm provided better depictions of white matter structures in subcortical areas adjoining gray matter which agreed more closely with corresponding contrasts on T2-weighted images than MWF-maps reconstructed with the method by Prasloski et al. We also achieved a higher level of correlations and agreements between inter-sequence (3DNS-MESE vs 3DNS-GRASE) MWF-value pairs. The proposed algorithm provides more noise

2-D simulation and analysis of temperature effects on electrical parameters degradation of power RF LDMOS device

International Nuclear Information System (INIS)

Belaid, M.A.; Ketata, K.; Gares, M.; Marcon, J.; Mourgues, K.; Masmoudi, M.

2006-01-01

This paper presents a synthesis of temperature effects on power RF Laterally Diffused (LD) MOS performances, which can modify and degrade transistor physical and electrical behaviour. In this work, the temperature influence on device electrical characteristics is discussed with regard to physical limits for device operation. A developed 2-D structure was implemented and simulated using the physical simulator Silvaco-Atlas to explain the observed data and offer insight into the physical origin of LDMOS temperature behaviour. The temperature dependence of most important electrical parameters such as channel current I ds , threshold voltage V th and inter-electrodes capacitances (C ds , C gs ) is investigated. The temperature effects on mobility, electron concentration, electric field, current flow lines and Fermi level are taken into account. Finally, initial failure analysis is discussed

2-D simulation and analysis of temperature effects on electrical parameters degradation of power RF LDMOS device

Energy Technology Data Exchange (ETDEWEB)

Belaid, M.A. [LEMI, University of Rouen, IUT Rouen, 76821 Mont Saint Aignan (France)]. E-mail: Mohamed-ali.belaid@univ-rouen.fr; Ketata, K. [LEMI, University of Rouen, IUT Rouen, 76821 Mont Saint Aignan (France); Gares, M. [LEMI, University of Rouen, IUT Rouen, 76821 Mont Saint Aignan (France); Marcon, J. [LEMI, University of Rouen, IUT Rouen, 76821 Mont Saint Aignan (France); Mourgues, K. [LEMI, University of Rouen, IUT Rouen, 76821 Mont Saint Aignan (France); Masmoudi, M. [LEMI, University of Rouen, IUT Rouen, 76821 Mont Saint Aignan (France)

2006-12-15

This paper presents a synthesis of temperature effects on power RF Laterally Diffused (LD) MOS performances, which can modify and degrade transistor physical and electrical behaviour. In this work, the temperature influence on device electrical characteristics is discussed with regard to physical limits for device operation. A developed 2-D structure was implemented and simulated using the physical simulator Silvaco-Atlas to explain the observed data and offer insight into the physical origin of LDMOS temperature behaviour. The temperature dependence of most important electrical parameters such as channel current I {sub ds}, threshold voltage V {sub th} and inter-electrodes capacitances (C {sub ds}, C {sub gs}) is investigated. The temperature effects on mobility, electron concentration, electric field, current flow lines and Fermi level are taken into account. Finally, initial failure analysis is discussed.

Molecular dynamics simulation based on the multi-component molecular orbital method: Application to H5O2+,D5O2+,andT5O2+

International Nuclear Information System (INIS)

Ishimoto, Takayoshi; Koyama, Michihisa

2012-01-01

Graphical abstract: Molecular dynamics method based on multi-component molecular orbital method was applied to basic hydrogen bonding systems, H 5 O 2 + , and its isotopomers (D 5 O 2 + andT 5 O 2 + ). Highlights: ► Molecular dynamics method with nuclear quantum effect was developed. ► Multi-component molecular orbital method was used as ab initio MO calculation. ► Developed method applied to basic hydrogen bonding system, H 5 O 2 + , and isotopomers. ► O ⋯ O vibrational stretching reflected to the distribution of protonic wavefunctions. ► H/D/T isotope effect was also analyzed. - Abstract: We propose a molecular dynamics (MD) method based on the multi-component molecular orbital (MC M O) method, which takes into account the quantum effect of proton directly, for the detailed analyses of proton transfer in hydrogen bonding system. The MC M O based MD (MC M O-MD) method is applied to the basic structures, H 5 O 2 + (called “Zundel ion”), and its isotopomers (D 5 O 2 + andT 5 O 2 + ). We clearly demonstrate the geometrical difference of hydrogen bonded O ⋯ O distance induced by H/D/T isotope effect because the O ⋯ O in H-compound was longer than that in D- or T-compound. We also find the strong relation between stretching vibration of O ⋯ O and the distribution of hydrogen bonded protonic wavefunction because the protonic wavefunction tends to delocalize when the O ⋯ O distance becomes short during the dynamics. Our proposed MC M O-MD simulation is expected as a powerful tool to analyze the proton dynamics in hydrogen bonding systems.

Three Dimensional Simulation of the Baneberry Nuclear Event

Science.gov (United States)

Lomov, Ilya N.; Antoun, Tarabay H.; Wagoner, Jeff; Rambo, John T.

2004-07-01

Baneberry, a 10-kiloton nuclear event, was detonated at a depth of 278 m at the Nevada Test Site on December 18, 1970. Shortly after detonation, radioactive gases emanating from the cavity were released into the atmosphere through a shock-induced fissure near surface ground zero. Extensive geophysical investigations, coupled with a series of 1D and 2D computational studies were used to reconstruct the sequence of events that led to the catastrophic failure. However, the geological profile of the Baneberry site is complex and inherently three-dimensional, which meant that some geological features had to be simplified or ignored in the 2D simulations. This left open the possibility that features unaccounted for in the 2D simulations could have had an important influence on the eventual containment failure of the Baneberry event. This paper presents results from a high-fidelity 3D Baneberry simulation based on the most accurate geologic and geophysical data available. The results are compared with available data, and contrasted against the results of the previous 2D computational studies.

Sismonaute. Un système pour la détection et l'interprétation des fronts d'onde en simulation sismique Sismonaute. A System for Detecting and Interpreting Wave Fronts in Seismic Simulations

Directory of Open Access Journals (Sweden)

Junker U.

2006-11-01

Full Text Available Nous développons un système, dénommé SISMONAUTE, d'aide aux géophysiciens pour l'étude de la propagation des ondes dans un modèle postulé de sous-sol. Le système suit les fronts d'onde dans une série d'instantanés 2D produits par un simulateur numérique. De plus, il rétablit l'historique de l'onde, c'est-à-dire la séquence des réflexions, transmissions et diffractions qui représente des transformations qualitatives de l'onde. Cet historique est essentiel pour la comparaison des sismogrammes simulés et observés. Nous utilisons pour interpréter les données de simulation un système dirigé par les connaissances qui applique le raisonnement causal pour prédire, à chaque stade, de nouveaux fronts d'onde. Ces fronts prédits permettent une détection guidée des fronts d'onde sur les instantanés. We are developing a system, called SISMONAUTE, that supports a geophysicist in studying the propagation of waves in a postulated model of the subsoil. The system tracks the wave fronts in a sequence of 2D-snapshots produced by a numerical simulator. Furthermore, it recovers the history of a wave, i. e. the sequence of reflections, transmissions, and diffractions which represents qualitative changes of the wave. This history is essential for comparing simulated and observed seismograms. We use a knowledge-driven approach to interpret the simulated data. Using causal reasoning, the system predicts new wave fronts in each step. These predicted fronts enable a guided detection of wave fronts in the snapshots.

FLOWPLOT2, 2-D, 3-D Fluid Dynamic Plots

International Nuclear Information System (INIS)

Cobb, C.K.; Tunstall, J.N.

1989-01-01

1 - Description of program or function: FLOWPLOT2 is a plotting program used with numerical or analytical fluid dynamics codes to create velocity vector plots, contour plots of up to three fluid parameters (e.g. pressure, density, and temperature), two-dimensional profile plots, three-dimensional curve plots, and/or three-dimensional surface plots for either the u or v velocity components. If the fluid dynamics code computes a transient or simulated time related solution, FLOWPLOT2 can also be used to generate these plots for any specified time interval. Multiple cases generating different plots for different time intervals may be run in one execution of the program. In addition, plots can be created for selected two- dimensional planes of three-dimensional steady-state problems. The user has the option of producing plots on CalComp or Versatec plotters or microfiche and of creating a compressed dataset before plotting. 2 - Method of solution: FLOWPLOT2 reads a dataset written by the fluid dynamics code. This dataset must be written in a specified format and must contain parametric data at the nodal points of a uniform or non-uniform rectangular grid formed by the intersection of the grid lines of the model. 3 - Restrictions on the complexity of the problem - Maxima of: 2500 nodes, 40 y-values for 2-D profile plots and 3-D curve plots, 20 contour values, 3 fluid parameters

Comparison of 2D and 3D Vision Gaze with Simultaneous Measurements of Accommodation and Convergence

OpenAIRE

Hori, Hiroki; Shiomi, Tomoki; Hasegawa, Satoshi; Takada, Hiroki; Omori, Masako; Matsuura, Yasuyuki; Ishio, Hiromu; Miyao, Masaru

2014-01-01

Accommodation and convergence were measured simultaneously while subjects viewed 2D and 3D images. The aim was to compare fixation distances between accommodation and convergence in young subjects while they viewed 2D and 3D images. Measurements were made three times, 40 seconds each, using 2D and 3D images. The result suggests that ocular functions during viewing of 3D images are very similar to those during natural viewing. Previously established and widely used theories, such that within a...

Risk Preferences and Predictions about Others: No Association with 2D:4D Ratio

Directory of Open Access Journals (Sweden)

Katharina Lima de Miranda

2018-02-01

Full Text Available Prenatal androgen exposure affects the brain development of the fetus which may facilitate certain behaviors and decision patterns in the later life. The ratio between the lengths of second and the fourth fingers (2D:4D is a negative biomarker of the ratio between prenatal androgen and estrogen exposure and men typically have lower ratios than women. In line with the typical findings suggesting that women are more risk averse than men, several studies have also shown negative relationships between 2D:4D and risk taking although the evidence is not conclusive. Previous studies have also reported that both men and women believe women are more risk averse than men. In the current study, we re-test the relationship between 2D:4D and risk preferences in a German student sample and also investigate whether the 2D:4D ratio is associated with people’s perceptions about others’ risk preferences. Following an incentivized risk elicitation task, we asked all participants their predictions about (i others’ responses (without sex specification, (ii men’s responses, and (iii women’s responses; then measured their 2D:4D ratios. In line with the previous findings, female participants in our sample were more risk averse. While both men and women underestimated other participants’ (non sex-specific and women’s risky decisions on average, their predictions about men were accurate. We also found evidence for the false consensus effect, as risky choices are positively correlated with predictions about other participants’ risky choices. The 2D:4D ratio was not directly associated either with risk preferences or the predictions of other participants’ choices. An unexpected finding was that women with mid-range levels of 2D:4D estimated significantly larger sex differences in participants’ decisions. This finding needs further testing in future studies.

Risk Preferences and Predictions about Others: No Association with 2D:4D Ratio

Science.gov (United States)

Lima de Miranda, Katharina; Neyse, Levent; Schmidt, Ulrich

2018-01-01

Prenatal androgen exposure affects the brain development of the fetus which may facilitate certain behaviors and decision patterns in the later life. The ratio between the lengths of second and the fourth fingers (2D:4D) is a negative biomarker of the ratio between prenatal androgen and estrogen exposure and men typically have lower ratios than women. In line with the typical findings suggesting that women are more risk averse than men, several studies have also shown negative relationships between 2D:4D and risk taking although the evidence is not conclusive. Previous studies have also reported that both men and women believe women are more risk averse than men. In the current study, we re-test the relationship between 2D:4D and risk preferences in a German student sample and also investigate whether the 2D:4D ratio is associated with people’s perceptions about others’ risk preferences. Following an incentivized risk elicitation task, we asked all participants their predictions about (i) others’ responses (without sex specification), (ii) men’s responses, and (iii) women’s responses; then measured their 2D:4D ratios. In line with the previous findings, female participants in our sample were more risk averse. While both men and women underestimated other participants’ (non sex-specific) and women’s risky decisions on average, their predictions about men were accurate. We also found evidence for the false consensus effect, as risky choices are positively correlated with predictions about other participants’ risky choices. The 2D:4D ratio was not directly associated either with risk preferences or the predictions of other participants’ choices. An unexpected finding was that women with mid-range levels of 2D:4D estimated significantly larger sex differences in participants’ decisions. This finding needs further testing in future studies. PMID:29472846

Model for Simulating Fasting Glucose in Type 2 Diabetes and the Effect of Adherence to Treatment

DEFF Research Database (Denmark)

Aradóttir, Tinna Björk; Boiroux, Dimitri; Bengtsson, Henrik

2017-01-01

trial results where a dose guidance algorithm was used. We investigate sources of variance and through simulations evaluate the contribution of adherence to variance and dose guidance quality. The results suggest that the model for simulation of T2D patients is sufficient for simulating fasting glucose......The primary goal of this paper is to predict fasting glucose levels in type 2 diabetes (T2D) in long-acting insulin treatment. The paper presents a model for simulating insulin-glucose dynamics in T2D patients. The model combines a physiological model of type 1 diabetes (T1D) and an endogenous...... insulin production model in T2D. We include a review of sources of variance in fasting glucose values in long-acting insulin treatment, with respect to dose guidance algorithms. We use the model to simulate fasting glucose levels in T2D long-acting insulin treatment and compare the results with clinical...

Comparative analysis of 2D and 3D model of a PEMFC in COMSOL

Science.gov (United States)

Lakshmi, R. Bakiya; Harikrishnan, N. P.; Juliet, A. Vimala

2017-10-01

In this article, 2D and 3D model of a PEMFC has been simulated in order to study their performance when subjected to similar operating conditions. The comparison reveals interesting phenomena of performance enhancement of the fuel cell. Design of fuel cell channel and stationary studies were done in COMSOL. Variations in current density and electrolyte potential from simulation results were observed when operated at a temperature of 120 °C. The electrolyte potential was found to have increased from 1 to 2.5 V and the surface pressure due to fluid flow was found to have increased from 3 to 9.58 Pa.

2-D fluid transport simulations of gaseous/radiative divertors

International Nuclear Information System (INIS)

Rognlien, T.D.; Brown, P.N.; Campbell, R.B.; Kaiser, T.B.; Knoll, D.A.; McHugh, P.R.; Porter, G.D.; Rensink, M.E.; Smith, G.R.

1994-01-01

The features of the fully implicit 2-D fluid code UEDGE are described. The utility of the code is demonstrated by showing bifurcations or multiple solutions of the tokamak edge plasma for both deuterium and impurity injection in the divertor. (orig.)

A convergent 2D finite-difference scheme for the Dirac–Poisson system and the simulation of graphene

International Nuclear Information System (INIS)

Brinkman, D.; Heitzinger, C.; Markowich, P.A.

2014-01-01

We present a convergent finite-difference scheme of second order in both space and time for the 2D electromagnetic Dirac equation. We apply this method in the self-consistent Dirac–Poisson system to the simulation of graphene. The model is justified for low energies, where the particles have wave vectors sufficiently close to the Dirac points. In particular, we demonstrate that our method can be used to calculate solutions of the Dirac–Poisson system where potentials act as beam splitters or Veselago lenses

Can Full Duplex reduce the discovery time in D2D Communication?

DEFF Research Database (Denmark)

Gatnau, Marta; Berardinelli, Gilberto; Mahmood, Nurul Huda

2016-01-01

Device-to-device (D2D) communication is considered as one of the key technologies to support new types of services, such as public safety and proximity-based applications. D2D communication requires a discovery phase, i.e., the node awareness procedure prior to the communication phase. Conventional...... half duplex transmission may not be sufficient to provide fast discovery and cope with the strict latency targets of future 5G services. On the other hand, in-band full duplex, by allowing simultaneous transmission and reception, may complete the discovery phase faster. In this paper, the potential...... of full duplex in providing fast discovery for the next 5th generation (5G) system supporting D2D communication is investigated. A design for such system is presented and evaluated via simulations, showing that full duplex can accelerate the discovery phase by supporting a higher transmission probability...

Production of the excited charm mesons D1 and D*2 at HERA

International Nuclear Information System (INIS)

Abramowicz, H.; Abt, I.; Adamczyk, L.

2012-08-01

The production of the excited charm mesons D 1 (2420) and D * 2 (2460) in ep collisions has been measured with the ZEUS detector at HERA using an integrated luminosity of 373 pb -1 . The masses of the neutral and charged states, the widths of the neutral states, and the helicity parameter of D 1 (2420) 0 were determined and compared with other measurements and with theoretical expectations. The measured helicity parameter of the D 0 1 allows for some mixing of S- and D-waves in its decay to D *± π -+ . The result is also consistent with a pure D-wave decay. Ratios of branching fractions of the two decay modes of the D * 2 (2460) 0 and D * 2 (2460) ± states were measured and compared with previous measurements. The fractions of charm quarks hadronising into D 1 and D * 2 were measured and are consistent with those obtained in e + e - annihilations.

3D Surgical Simulation

OpenAIRE

Cevidanes, Lucia; Tucker, Scott; Styner, Martin; Kim, Hyungmin; Chapuis, Jonas; Reyes, Mauricio; Proffit, William; Turvey, Timothy; Jaskolka, Michael

2010-01-01

This paper discusses the development of methods for computer-aided jaw surgery. Computer-aided jaw surgery allows us to incorporate the high level of precision necessary for transferring virtual plans into the operating room. We also present a complete computer-aided surgery (CAS) system developed in close collaboration with surgeons. Surgery planning and simulation include construction of 3D surface models from Cone-beam CT (CBCT), dynamic cephalometry, semi-automatic mirroring, interactive ...

GPU accelerated simulations of 3D deterministic particle transport using discrete ordinates method

International Nuclear Information System (INIS)

Gong Chunye; Liu Jie; Chi Lihua; Huang Haowei; Fang Jingyue; Gong Zhenghu

2011-01-01

Graphics Processing Unit (GPU), originally developed for real-time, high-definition 3D graphics in computer games, now provides great faculty in solving scientific applications. The basis of particle transport simulation is the time-dependent, multi-group, inhomogeneous Boltzmann transport equation. The numerical solution to the Boltzmann equation involves the discrete ordinates (S n ) method and the procedure of source iteration. In this paper, we present a GPU accelerated simulation of one energy group time-independent deterministic discrete ordinates particle transport in 3D Cartesian geometry (Sweep3D). The performance of the GPU simulations are reported with the simulations of vacuum boundary condition. The discussion of the relative advantages and disadvantages of the GPU implementation, the simulation on multi GPUs, the programming effort and code portability are also reported. The results show that the overall performance speedup of one NVIDIA Tesla M2050 GPU ranges from 2.56 compared with one Intel Xeon X5670 chip to 8.14 compared with one Intel Core Q6600 chip for no flux fixup. The simulation with flux fixup on one M2050 is 1.23 times faster than on one X5670.

GPU accelerated simulations of 3D deterministic particle transport using discrete ordinates method

Science.gov (United States)

Gong, Chunye; Liu, Jie; Chi, Lihua; Huang, Haowei; Fang, Jingyue; Gong, Zhenghu

2011-07-01

Graphics Processing Unit (GPU), originally developed for real-time, high-definition 3D graphics in computer games, now provides great faculty in solving scientific applications. The basis of particle transport simulation is the time-dependent, multi-group, inhomogeneous Boltzmann transport equation. The numerical solution to the Boltzmann equation involves the discrete ordinates ( Sn) method and the procedure of source iteration. In this paper, we present a GPU accelerated simulation of one energy group time-independent deterministic discrete ordinates particle transport in 3D Cartesian geometry (Sweep3D). The performance of the GPU simulations are reported with the simulations of vacuum boundary condition. The discussion of the relative advantages and disadvantages of the GPU implementation, the simulation on multi GPUs, the programming effort and code portability are also reported. The results show that the overall performance speedup of one NVIDIA Tesla M2050 GPU ranges from 2.56 compared with one Intel Xeon X5670 chip to 8.14 compared with one Intel Core Q6600 chip for no flux fixup. The simulation with flux fixup on one M2050 is 1.23 times faster than on one X5670.

Comparative thermal cyclic test of different beryllium grades previously subjected to simulated disruption loads

International Nuclear Information System (INIS)

Gervash, A.; Giniyatulin, R.; Mazul, I.

1999-01-01

Considering beryllium as plasma facing armour this paper presents recent results obtained in Russia. A special process of joining beryllium to a Cu-alloy material structure is described and recent results of thermal cycling tests of such joints are presented. Summarizing the results, the authors show that a Cu-alloy heat sink structure armoured with beryllium can survive high heat fluxes (≥10 MW/m 2 ) during 1000 heating/cooling cycles without serious damage to the armour material and its joint. The principal feasibility of thermal cycling of beryllium grades and their joints directly in the core of a nuclear reactor is demonstrated and the main results of this test are presented. The paper also describes the thermal cycling of different beryllium grades having cracks initiated by previously applied high heat loads simulating plasma disruptions. (orig.)

Analysis of PKP scattering using mantle mixing simulations and axisymmetric 3D waveforms

Science.gov (United States)

Haugland, Samuel M.; Ritsema, Jeroen; van Keken, Peter E.; Nissen-Meyer, Tarje

2018-03-01

The scattering of PKP waves in the lower mantle produces isolated signals before the PKIKP phase. We explore whether these so-called PKIKP precursors can be related to wave scattering off mid ocean ridge basalt (MORB) fragments that have been advected in the deep mantle throughout geologic time. We construct seismic models of small-scale (>20 km) heterogeneity in the lower mantle informed by mantle mixing simulations from Brandenburg et al. (2008) and generate PKIKP precursors using 3D, axisymmetric waveform simulations up to 0.75 Hz. We consider two end-member geodynamic models with fundamentally different distributions of MORB in the lower mantle. Our results suggest that the accumulation of MORB at the base of the mantle is a viable hypothesis for the origin of PKP scattering. We find that the strength of the PKIKP precursor amplitudes is consistent with P wave speed heterogeneity of 0.1-0.2%, as reported previously. The radial distribution of MORB has a profound effect on the strength of PKIKP precursors. Simulation of PKIKP precursors for models with an increasing MORB concentration in the lowermost 500 km of the mantle appears to reproduce most accurately the strength of PKIKP precursors in Global Seismic Network waveforms. These models assume that MORB has an excess density of at least 7%. Additional simulations of more complex geodynamic models will better constrain the geodynamic conditions to explain the significant variability of PKP scattering strength.

THREE-DIMENSIONAL CORE-COLLAPSE SUPERNOVA SIMULATED USING A 15 M{sub ⊙} PROGENITOR

Energy Technology Data Exchange (ETDEWEB)

Lentz, Eric J.; Mezzacappa, Anthony; Harris, J. Austin; Yakunin, Konstantin N. [Department of Physics and Astronomy, University of Tennessee, Knoxville, TN 37996-1200 (United States); Bruenn, Stephen W. [Department of Physics, Florida Atlantic University, 777 Glades Road, Boca Raton, FL 33431-0991 (United States); Hix, W. Raphael [Physics Division, Oak Ridge National Laboratory, P.O. Box 2008, Oak Ridge, TN 37831-6354 (United States); Messer, O. E. Bronson [National Center for Computational Sciences, Oak Ridge National Laboratory, P.O. Box 2008, Oak Ridge, TN 37831-6164 (United States); Endeve, Eirik [Computer Science and Mathematics Division, Oak Ridge National Laboratory, P.O. Box 2008, Oak Ridge, TN 37831-6164 (United States); Blondin, John M. [Department of Physics, North Carolina State University, Raleigh, NC 27695-8202 (United States); Marronetti, Pedro, E-mail: elentz@utk.edu [Physics Division, National Science Foundation, Arlington, VA 22207 (United States)

2015-07-10

We have performed ab initio neutrino radiation hydrodynamics simulations in three and two spatial dimensions (3D and 2D) of core-collapse supernovae from the same 15 M{sub ☉} progenitor through 440 ms after core bounce. Both 3D and 2D models achieve explosions; however, the onset of explosion (shock revival) is delayed by ∼100 ms in 3D relative to the 2D counterpart and the growth of the diagnostic explosion energy is slower. This is consistent with previously reported 3D simulations utilizing iron-core progenitors with dense mantles. In the ∼100 ms before the onset of explosion, diagnostics of neutrino heating and turbulent kinetic energy favor earlier explosion in 2D. During the delay, the angular scale of convective plumes reaching the shock surface grows and explosion in 3D is ultimately lead by a single, large-angle plume, giving the expanding shock a directional orientation not dissimilar from those imposed by axial symmetry in 2D simulations. We posit that shock revival and explosion in the 3D simulation may be delayed until sufficiently large plumes form, whereas such plumes form more rapidly in 2D, permitting earlier explosions.

H-mode WEST tungsten divertor operation: deuterium and nitrogen seeded simulations with SOLEDGE2D-EIRENE

Directory of Open Access Journals (Sweden)

G. Ciraolo

2017-08-01

Full Text Available Simulations of WEST H-mode divertor scenarios have been performed with SOLEDGE2D-EIRENE edge plasma transport code, both for pure deuterium and nitrogen seeded discharge. In the pure deuterium case, a target heat flux of 8 MW/m2 is reached, but misalignment between heat and the particle outflux yields 50 eV plasma temperature at the target plates. With nitrogen seeding, the heat and particle outflux are observed to be aligned so that lower plasma temperatures at the target plates are achieved together with the required high heat fluxes. This change in heat and particle outflux alignment is analysed with respect to the role of divertor geometry and the impact of vertical vs horizontal target plates on neutrals spreading.

An Evaluative Review of Simulated Dynamic Smart 3d Objects

Science.gov (United States)

Romeijn, H.; Sheth, F.; Pettit, C. J.

2012-07-01

Three-dimensional (3D) modelling of plants can be an asset for creating agricultural based visualisation products. The continuum of 3D plants models ranges from static to dynamic objects, also known as smart 3D objects. There is an increasing requirement for smarter simulated 3D objects that are attributed mathematically and/or from biological inputs. A systematic approach to plant simulation offers significant advantages to applications in agricultural research, particularly in simulating plant behaviour and the influences of external environmental factors. This approach of 3D plant object visualisation is primarily evident from the visualisation of plants using photographed billboarded images, to more advanced procedural models that come closer to simulating realistic virtual plants. However, few programs model physical reactions of plants to external factors and even fewer are able to grow plants based on mathematical and/or biological parameters. In this paper, we undertake an evaluation of plant-based object simulation programs currently available, with a focus upon the components and techniques involved in producing these objects. Through an analytical review process we consider the strengths and weaknesses of several program packages, the features and use of these programs and the possible opportunities in deploying these for creating smart 3D plant-based objects to support agricultural research and natural resource management. In creating smart 3D objects the model needs to be informed by both plant physiology and phenology. Expert knowledge will frame the parameters and procedures that will attribute the object and allow the simulation of dynamic virtual plants. Ultimately, biologically smart 3D virtual plants that react to changes within an environment could be an effective medium to visually represent landscapes and communicate land management scenarios and practices to planners and decision-makers.

Supersymmetric D2 anti-D2 Strings

OpenAIRE

Bak, Dongsu; Ohta, Nobuyoshi

2001-01-01

We consider the flat supersymmetric D2 and anti-D2 system, which follows from ordinary noncommutative D2 anti-D2 branes by turning on an appropriate worldvolume electric field describing dissolved fundamental strings. We study the strings stretched between D2 and anti-D2 branes and show explicitly that the would-be tachyonic states become massless. We compute the string spectrum and clarify the induced noncommutativity on the worldvolume. The results are compared with the matrix theory descri...

Calculation of residual stresses by means of a 3D numerical weld simulation

International Nuclear Information System (INIS)

Nicak, Tomas; Huemmer, Matthias

2008-01-01

The numerical weld simulation has developed very fast in recent years. The problem complexity has increased from simple 2D models to full 3D models, which can describe the entire welding process more realistically. As recent research projects indicate, a quantitative assessment of the residual stresses by means of a 3D analysis is possible. The structure integrity can be assessed based on the weld simulation results superimposed with the operating load. Moreover, to support the qualification of welded components parametric studies for optimization of the residual stress distribution in the weld region can be performed. In this paper a full 3D numerical weld simulation for a man-hole drainage nozzle in a steam generator will be presented. The residual stresses are calculated by means of an uncoupled transient thermal and mechanical FE analysis. The paper will present a robust procedure allowing reasonable predictions of the residual stresses for complex structures in industrial practice. (authors)

Titan 2D: Understanding Titan’s Seasonal Atmospheric Cycles

Science.gov (United States)

Wong, Michael; Zhang, X.; Li, C.; Hu, R.; Shia, R.; Newman, C.; Müller-Wodarg, I.; Yung, Y.

2013-10-01

In this study, we present results from a novel two-dimensional (2D) model that simulates the physics and chemistry of Titan’s atmosphere. Despite being an icy moon of Saturn, Titan is the only Solar System object aside from Earth that is sheathed by a thick nitrogen-dominated atmosphere. This vulnerable gaseous envelope—an embodiment of a delicate coupling between photochemistry, radiation, and dynamics—is Nature’s laboratory for the synthesis of complex organic molecules. Titan’s large obliquity generates pronounced seasonal cycles in its atmosphere, and the Cassini spacecraft has been observing these variations since 2004. In particular, Cassini measurements show that the latitudinal distribution of Titan’s rich mélange of hydrocarbon species follows seasonal patterns. The mixing ratios of hydrocarbons increase with latitude towards the winter pole, suggesting a pole-to-pole circulation that reverses after equinox. Using a one-dimensional photochemical model of Titan’s atmosphere, we show that photochemistry alone cannot produce the observed meridional hydrocarbon distribution. This necessitates the employment of a 2D chemistry-transport model that includes meridional circulation as well as diffusive processes and photochemistry. Of additional concern, no previous 2D model of Titan extends beyond 500 km altitude—a critical limitation since the peak of methane photolysis is at 800 km. Our 2D model is the first to include Titan’s stratosphere, mesosphere, and thermosphere. The meridional circulation in our 2D model is derived from the outputs of two general circulation models (GCMs): the TitanWRF GCM (Newman et al. 2011) covering the troposphere, stratosphere, and lower mesosphere, and a thermosphere general circulation model (TGCM) covering the remainder of the atmosphere through the thermosphere (Müller-Wodarg et al. 2003; 2008). This presentation will focus on the utilization of these advances applied to the 2D Caltech/JPL KINETICS model to

Simulating 3D deformation using connected polygons

Science.gov (United States)

Tarigan, J. T.; Jaya, I.; Hardi, S. M.; Zamzami, E. M.

2018-03-01

In modern 3D application, interaction between user and the virtual world is one of an important factor to increase the realism. This interaction can be visualized in many forms; one of them is object deformation. There are many ways to simulate object deformation in virtual 3D world; each comes with different level of realism and performance. Our objective is to present a new method to simulate object deformation by using a graph-connected polygon. In this solution, each object contains multiple level of polygons in different level of volume. The proposed solution focusses on performance rather while maintaining the acceptable level of realism. In this paper, we present the design and implementation of our solution and show that this solution is usable in performance sensitive 3D application such as games and virtual reality.

A convergent 2D finite-difference scheme for the Dirac-Poisson system and the simulation of graphene

KAUST Repository

Brinkman, Daniel; Heitzinger, Clemens Heitzinger; Markowich, Peter A.

2014-01-01

We present a convergent finite-difference scheme of second order in both space and time for the 2D electromagnetic Dirac equation. We apply this method in the self-consistent Dirac-Poisson system to the simulation of graphene. The model is justified for low energies, where the particles have wave vectors sufficiently close to the Dirac points. In particular, we demonstrate that our method can be used to calculate solutions of the Dirac-Poisson system where potentials act as beam splitters or Veselago lenses. © 2013 Elsevier Inc.

Design of 3D simulation engine for oilfield safety training

Science.gov (United States)

Li, Hua-Ming; Kang, Bao-Sheng

2015-03-01

Aiming at the demand for rapid custom development of 3D simulation system for oilfield safety training, this paper designs and implements a 3D simulation engine based on script-driven method, multi-layer structure, pre-defined entity objects and high-level tools such as scene editor, script editor, program loader. A scripting language been defined to control the system's progress, events and operating results. Training teacher can use this engine to edit 3D virtual scenes, set the properties of entity objects, define the logic script of task, and produce a 3D simulation training system without any skills of programming. Through expanding entity class, this engine can be quickly applied to other virtual training areas.

Application of computer virtual simulation technology in 3D animation production

Science.gov (United States)

Mo, Can

2017-11-01

In the continuous development of computer technology, the application system of virtual simulation technology has been further optimized and improved. It also has been widely used in various fields of social development, such as city construction, interior design, industrial simulation and tourism teaching etc. This paper mainly introduces the virtual simulation technology used in 3D animation. Based on analyzing the characteristics of virtual simulation technology, the application ways and means of this technology in 3D animation are researched. The purpose is to provide certain reference for the 3D effect promotion days after.

GaAs micromachining in the 1 H2SO4:1 H2O2:8 H2O system. From anisotropy to simulation

Science.gov (United States)

Tellier, C. R.

2011-02-01

The bulk micromachining on (010), (110) and (111)A GaAs substrates in the 1 H2SO4:1 H2O2:8 H2O system is investigated. Focus is placed on anisotropy of 3D etching shapes with a special emphasis on convex and concave undercuts which are of prime importance in the wet micromachining of mechanical structures. Etched structures exhibit curved contours and more and less rounded sidewalls showing that the anisotropy is of type 2. This anisotropy can be conveniently described by a kinematic and tensorial model. Hence, a database composed of dissolution constants is further determined from experiments. A self-elaborated simulator which works with the proposed database is used to derive theoretical 3D shapes. Simulated shapes agree well with observed shapes of microstructures. The successful simulations open up two important applications for MEMS: CAD of mask patterns and meshing of simulated shapes for FEM simulation tools.

3D-printed pediatric endoscopic ear surgery simulator for surgical training.

Science.gov (United States)

Barber, Samuel R; Kozin, Elliott D; Dedmon, Matthew; Lin, Brian M; Lee, Kyuwon; Sinha, Sumi; Black, Nicole; Remenschneider, Aaron K; Lee, Daniel J

2016-11-01

Surgical simulators are designed to improve operative skills and patient safety. Transcanal Endoscopic Ear Surgery (TEES) is a relatively new surgical approach with a slow learning curve due to one-handed dissection. A reusable and customizable 3-dimensional (3D)-printed endoscopic ear surgery simulator may facilitate the development of surgical skills with high fidelity and low cost. Herein, we aim to design, fabricate, and test a low-cost and reusable 3D-printed TEES simulator. The TEES simulator was designed in computer-aided design (CAD) software using anatomic measurements taken from anthropometric studies. Cross sections from external auditory canal samples were traced as vectors and serially combined into a mesh construct. A modified tympanic cavity with a modular testing platform for simulator tasks was incorporated. Components were fabricated using calcium sulfate hemihydrate powder and multiple colored infiltrants via a commercial inkjet 3D-printing service. All components of a left-sided ear were printed to scale. Six right-handed trainees completed three trials each. Mean trial time (n = 3) ranged from 23.03 to 62.77 s using the dominant hand for all dissection. Statistically significant differences between first and last completion time with the dominant hand (p 3D-printed simulator is feasible for TEES simulation. Otolaryngology training programs with access to a 3D printer may readily fabricate a TEES simulator, resulting in inexpensive yet high-fidelity surgical simulation. Copyright © 2016 Elsevier Ireland Ltd. All rights reserved.

DRAGON and SERPENT 2-D modelling of the SLOWPOKE-2 reactor at Ecole Polytechnique Montreal

International Nuclear Information System (INIS)

Raouafi, H.; Marleau, G.

2012-01-01

DRAGON is a deterministic code that can be used to perform lattice cell calculations based on numerical solutions of neutron transport equation. DRAGON can also be used for full core 2-D and 3-D simulations in transport. One alternative to the use of such a deterministic code consist in following the history of neutrons in the core based on statistical Monte Carlo simulation with codes like MCNP and SERPENT. This second calculation approach has been used successfully for SLOWPOKE-2 simulation in the past. Here we present a comparison between DRAGON and SERPENT calculations for the SLOWPOKE-2 reactor. We also compare the flux distribution obtained using both codes for a copper sample placed inside a small irradiation site. (author)

Melting of 2D monatomic solids: Lennard-Jones system

International Nuclear Information System (INIS)

Yi, Y.M.; Guo, Z.C.

1987-09-01

The Lennard-Jones interaction has been introduced into the Collins mix lattice of 2D liquids. By means of rigorous calculation of the total potential and the free area, the Gibbs functions for 2D liquid and solid have been derived. The melting line obtained from the phase transition equation agrees quite well with the result of recent computer simulation experiments. The obtained reduced temperature of the triple point T* t =0.438 agrees with the data measured in experiments of some inert gas monolayers adsorbed on graphite as well as in computer simulation experiments. (author). 11 refs, 7 figs, 3 tabs

D Hydrodynamics Simulation of Amazonian Seasonally Flooded Wetlands

Science.gov (United States)

Pinel, S. S.; Bonnet, M. P.; Da Silva, J. S.; Cavalcanti, R., Sr.; Calmant, S.

2016-12-01

In the low Amazonian basin, interactions between floodplains and river channels are important in terms of water exchanges, sediments, or nutrients. These wetlands are considered as hotspot of biodiversity and are among the most productive in the world. However, they are threatened by climatic changes and anthropic activities. Hence, considering the implications for predicting inundation status of floodplain habitats, the strong interactions between water circulation, energy fluxes, biogeochemical and ecological processes, detailed analyses of flooding dynamics are useful and needed. Numerical inundation models offer means to study the interactions among different water sources. Modeling floods events in this area is challenging because flows respond to dynamic hydraulic controls coming from several water sources, complex geomorphology, and vegetation. In addition, due to the difficulty of access, there is a lack of existing hydrological data. In this context, the use of monitoring systems by remote sensing is a good option. In this study, we simulated filling and drainage processes of an Amazon floodplain (Janauacá Lake, AM, Brazil) over a 6 years period (2006-2012). Common approaches of flow modeling in the Amazon region consist of coupling a 1D simulation of the main channel flood wave to a 2D simulation of the inundation of the floodplain. Here, our approach differs as the floodplain is fully simulated. Model used is the 3D model IPH-ECO, which consists of a three-dimensional hydrodynamic module coupled with an ecosystem module. The IPH-ECO hydrodynamic module solves the Reynolds-Averaged Navier-Stokes equations using a semi-implicit discretization. After having calibrated the simulation against roughness coefficients, we validated the model in terms of vertical accuracy against water levels (daily in situ and altimetrics data), in terms of flood extent against inundation maps deduced from available remote-sensed product imagery (ALOS-1/PALSAR.), and in terms

Coherent 3D nanostructure of γ-Al{sub 2}O{sub 3}: Simulation of whole X-ray powder diffraction pattern

Energy Technology Data Exchange (ETDEWEB)

Pakharukova, V.P., E-mail: verapakh@catalysis.ru [Boreskov Institute of Catalysis SB RAS, Pr. Lavrentieva 5, 630090 Novosibirsk (Russian Federation); Novosibirsk State University, Pirogova Street 2, 630090 Novosibirsk (Russian Federation); Research and Educational Center for Energy Efficient Catalysis, Novosibirsk State University, Novosibirsk 630090 (Russian Federation); Yatsenko, D.A. [Boreskov Institute of Catalysis SB RAS, Pr. Lavrentieva 5, 630090 Novosibirsk (Russian Federation); Novosibirsk State University, Pirogova Street 2, 630090 Novosibirsk (Russian Federation); Gerasimov, E. Yu.; Shalygin, A.S.; Martyanov, O.N.; Tsybulya, S.V. [Boreskov Institute of Catalysis SB RAS, Pr. Lavrentieva 5, 630090 Novosibirsk (Russian Federation); Novosibirsk State University, Pirogova Street 2, 630090 Novosibirsk (Russian Federation); Research and Educational Center for Energy Efficient Catalysis, Novosibirsk State University, Novosibirsk 630090 (Russian Federation)

2017-02-15

The structure and nanostructure features of nanocrystalline γ-Al{sub 2}O{sub 3} obtained by dehydration of boehmite with anisotropic platelet-shaped particles were investigated. The original models of 3D coherent nanostructure of γ-Al{sub 2}O{sub 3} were constructed. The models of nanostructured γ-Al{sub 2}O{sub 3} particles were first confirmed by a direct simulation of powder X–Ray diffraction (XRD) patterns using the Debye Scattering Equation (DSE) with assistance of high-resolution transmission electron microscopy (HRTEM) study. The average crystal structure of γ-Al{sub 2}O{sub 3} was shown to be tetragonally distorted. The experimental results revealed that thin γ-Al{sub 2}O{sub 3} platelets were heterogeneous on a nanometer scale and nanometer-sized building blocks were separated by partially coherent interfaces. The XRD simulation results showed that a specific packing of the primary crystalline blocks in the nanostructured γ-Al{sub 2}O{sub 3} particles with formation of planar defects on (001), (100), and (101) planes nicely accounted for pronounced diffuse scattering, anisotropic peak broadening and peak shifts in the experimental XRD pattern. The identified planar defects in cation sublattice seem to be described as filling cation non-spinel sites in existing crystallographic models of γ-Al{sub 2}O{sub 3} structure. The overall findings provided an insight into the complex nanostructure, which is intrinsic to the metastable γ-Al{sub 2}O{sub 3} oxide. - Highlights: • Thin plate-like crystallites of γ-Al{sub 2}O{sub 3} were obtained. • Models of 3D coherent nanostructure of γ-Al{sub 2}O{sub 3} were constructed. • Models were verified by simulating XRD patterns using the Debye Scattering Equation. • Specific broadening of XRD peaks was explained in terms of planar defects. • Primary crystalline blocks in γ-Al{sub 2}O{sub 3} are separated by partially coherent interfaces.

Monte Carlo simulation of explosive detection system based on a Deuterium-Deuterium (D-D) neutron generator.

Science.gov (United States)

Bergaoui, K; Reguigui, N; Gary, C K; Brown, C; Cremer, J T; Vainionpaa, J H; Piestrup, M A

2014-12-01

An explosive detection system based on a Deuterium-Deuterium (D-D) neutron generator has been simulated using the Monte Carlo N-Particle Transport Code (MCNP5). Nuclear-based explosive detection methods can detect explosives by identifying their elemental components, especially nitrogen. Thermal neutron capture reactions have been used for detecting prompt gamma emission (10.82MeV) following radiative neutron capture by (14)N nuclei. The explosive detection system was built based on a fully high-voltage-shielded, axial D-D neutron generator with a radio frequency (RF) driven ion source and nominal yield of about 10(10) fast neutrons per second (E=2.5MeV). Polyethylene and paraffin were used as moderators with borated polyethylene and lead as neutron and gamma ray shielding, respectively. The shape and the thickness of the moderators and shields are optimized to produce the highest thermal neutron flux at the position of the explosive and the minimum total dose at the outer surfaces of the explosive detection system walls. In addition, simulation of the response functions of NaI, BGO, and LaBr3-based γ-ray detectors to different explosives is described. Copyright © 2014 Elsevier Ltd. All rights reserved.

Validation of a 3D/1D Simulation Tool for ICRF Antennas

International Nuclear Information System (INIS)

Maggiora, R.; Lancellotti, V.; Milanesio, D.; Vecchi, G.; Kyrytsya, V.; Parisot, A.; Wukitch, S. J.

2005-01-01

TOPICA is an innovative tool for the simulation of the Ion Cyclotron Radio Frequency (ICRF) antenna systems that incorporates commercial-grade graphic interfaces into a fully 3D self-consistent description of the antenna geometry and an accurate description of the plasma; it can be considered as a 'Virtual Prototyping Laboratory' to assist the detailed design phase of the antenna system. Recent theoretical and computational advances of the TOPICA code has allowed to incorporate a CAD drawing capability of the antenna geometry, with fully 3D geometrical modeling, and to combine it with a 1D accurate plasma description that takes into account density and temperature profiles, and FLR effects; the profiles are inserted directly from measured data (when available), or specified analytically by the user. The coaxial feeding line is modeled as such; computation and visualization of relevant parameters (input scattering parameters, current and field distributions, etc.) complete the suite. The approach to the problem is based on an integral-equation formulation for the self-consistent evaluation of the current distribution on the conductors. The environment has been subdivided in two coupled region: the plasma region and the vacuum region. The two problems are linked self-consistently by representing the field continuity in terms of equivalent (unknown) sources. In the vacuum region all the calculations are executed in the spatial (configuration) domain, and this allows triangular-facet description of the arbitrarily shaped conductors and associated currents; in the plasma region a spectral representation of the fields is used, which allows to enter the plasma effect via a surface impedance matrix; for this reason any plasma model can be used, and at present the FELICE code has been adopted; special techniques have been adopted to increase the numerical efficiency. The TOPICA suite has been previously tested against assessed codes and against measurements of mock-ups and

FUN3D Manual: 13.2

Science.gov (United States)

Biedron, Robert T.; Carlson, Jan-Renee; Derlaga, Joseph M.; Gnoffo, Peter A.; Hammond, Dana P.; Jones, William T.; Kleb, William L.; Lee-Rausch, Elizabeth M.; Nielsen, Eric J.; Park, Michael A.;

L3.PHI.CTF.P10.02-rev2 Coupling of Subchannel T/H (CTF) and CRUD Chemistry (MAMBA1D)

Energy Technology Data Exchange (ETDEWEB)

Salko, Robert K. [Oak Ridge National Lab. (ORNL), Oak Ridge, TN (United States); Palmtag, Scott [Oak Ridge National Lab. (ORNL), Oak Ridge, TN (United States); Collins, Benjamin S. [Oak Ridge National Lab. (ORNL), Oak Ridge, TN (United States); Kendrick, Brian [Los Alamos National Lab. (LANL), Los Alamos, NM (United States); Seker, Jeffrey [Westinghouse Electric Company LLC, Cranberry Township, PA (United States)

2015-05-15

The purpose of this milestone is to create a preliminary capability for modeling light water reactor (LWR) thermal-hydraulic (T/H) and CRUD growth using the CTF subchannel code and the subgrid version of the MAMBA CRUD chemistry code, MAMBA1D. In part, this is a follow-on to Milestone L3.PHI.VCS.P9.01, which is documented in Report CASL-U-2014-0188-000, titled "Development of CTF Capability for Modeling Reactor Operating Cycles with Crud Growth". As the title suggests, the previous milestone set up a framework for modeling reactor operation cycles with CTF. The framework also facilitated coupling to a CRUD chemistry capability for modeling CRUD growth throughout the reactor operating cycle. To demonstrate the capability, a simple CRUD \\surrogate" tool was developed and coupled to CTF; however, it was noted that CRUD growth predictions by the surrogate were not considered realistic. This milestone builds on L3.PHI.VCS.P9.01 by replacing this simple surrogate tool with the more advanced MAMBA1D CRUD chemistry code. Completing this task involves addressing unresolved tasks from Milestone L3.PHI.VCS.P9.01, setting up an interface to MAMBA1D, and extracting new T/H information from CTF that was not previously required in the simple surrogate tool. Speci c challenges encountered during this milestone include (1) treatment of the CRUD erosion model, which requires local turbulent kinetic energy (TKE) (a value that CTF does not calculate) and (2) treatment of the MAMBA1D CRUD chimney boiling model in the CTF rod heat transfer solution. To demonstrate this new T/H, CRUD modeling capability, two sets of simulations were performed: (1) an 18 month cycle simulation of a quarter symmetry model of Watts Bar and (2) a simulation of Assemblies G69 and G70 from Seabrook Cycle 5. The Watts Bar simulation is merely a demonstration of the capability. The simulation of the Seabrook cycle, which had experienced CRUD-related fuel rod failures, had actual CRUD-scrape data to compare with

Diffusion Monte Carlo simulations of gas phase and adsorbed D2-(H2)n clusters

Science.gov (United States)

Curotto, E.; Mella, M.

2018-03-01

We have computed ground state energies and analyzed radial distributions for several gas phase and adsorbed D2(H2)n and HD(H2)n clusters. An external model potential designed to mimic ionic adsorption sites inside porous materials is used [M. Mella and E. Curotto, J. Phys. Chem. A 121, 5005 (2017)]. The isotopic substitution lowers the ground state energies by the expected amount based on the mass differences when these are compared with the energies of the pure clusters in the gas phase. A similar impact is found for adsorbed aggregates. The dissociation energy of D2 from the adsorbed clusters is always much higher than that of H2 from both pure and doped aggregates. Radial distributions of D2 and H2 are compared for both the gas phase and adsorbed species. For the gas phase clusters, two types of hydrogen-hydrogen interactions are considered: one based on the assumption that rotations and translations are adiabatically decoupled and the other based on nonisotropic four-dimensional potential. In the gas phase clusters of sufficiently large size, we find the heavier isotopomer more likely to be near the center of mass. However, there is a considerable overlap among the radial distributions of the two species. For the adsorbed clusters, we invariably find the heavy isotope located closer to the attractive interaction source than H2, and at the periphery of the aggregate, H2 molecules being substantially excluded from the interaction with the source. This finding rationalizes the dissociation energy results. For D2-(H2)n clusters with n ≥12 , such preference leads to the desorption of D2 from the aggregate, a phenomenon driven by the minimization of the total energy that can be obtained by reducing the confinement of (H2)12. The same happens for (H2)13, indicating that such an effect may be quite general and impact on the absorption of quantum species inside porous materials.

Nested 1D-2D approach for urban surface flood modeling

Science.gov (United States)

Murla, Damian; Willems, Patrick

2015-04-01

Floods in urban areas as a consequence of sewer capacity exceedance receive increased attention because of trends in urbanization (increased population density and impermeability of the surface) and climate change. Despite the strong recent developments in numerical modeling of water systems, urban surface flood modeling is still a major challenge. Whereas very advanced and accurate flood modeling systems are in place and operation by many river authorities in support of flood management along rivers, this is not yet the case in urban water management. Reasons include the small scale of the urban inundation processes, the need to have very high resolution topographical information available, and the huge computational demands. Urban drainage related inundation modeling requires a 1D full hydrodynamic model of the sewer network to be coupled with a 2D surface flood model. To reduce the computational times, 0D (flood cones), 1D/quasi-2D surface flood modeling approaches have been developed and applied in some case studies. In this research, a nested 1D/2D hydraulic model has been developed for an urban catchment at the city of Gent (Belgium), linking the underground sewer (minor system) with the overland surface (major system). For the overland surface flood modelling, comparison was made of 0D, 1D/quasi-2D and full 2D approaches. The approaches are advanced by considering nested 1D-2D approaches, including infiltration in the green city areas, and allowing the effects of surface storm water storage to be simulated. An optimal nested combination of three different mesh resolutions was identified; based on a compromise between precision and simulation time for further real-time flood forecasting, warning and control applications. Main streets as mesh zones together with buildings as void regions constitute one of these mesh resolution (3.75m2 - 15m2); they have been included since they channel most of the flood water from the manholes and they improve the accuracy of

Structure Prediction, Molecular Dynamics Simulation and Docking Studies of D-Specific Dehalogenase from Rhizobium sp. RC1

Directory of Open Access Journals (Sweden)

Ismaila Yada Sudi

2012-11-01

Full Text Available Currently, there is no three-dimensional structure of D-specific dehalogenase (DehD in the protein database. We modeled DehD using ab initio technique, performed molecular dynamics (MD simulation and docking of D-2-chloropropionate (D-2CP, D-2-bromopropionate (D-2BP, monochloroacetate (MCA, monobromoacetate (MBA, 2,2-dichloropropionate (2,2-DCP, d,l-2,3-dichloropropionate (d,l-2,3-DCP, and 3-chloropropionate (3-CP into the DehD active site. The sequences of DehD and D-2-haloacid dehalogenase (HadD from Pseudomonas putida AJ1 have 15% sequence similarity. The model had 80% of the amino acid residues in the most favored region when compared to the crystal structure of DehI from Pseudomonas putida PP3. Docking analysis revealed that Arg107, Arg134 and Tyr135 interacted with D-2CP, and Glu20 activated the water molecule for hydrolytic dehalogenation. Single residue substitutions at 25–30 °C showed that polar residues of DehD were stable when substituted with nonpolar residues and showed a decrease in activity within the same temperature range. The molecular dynamics simulation of DehD and its variants showed that in R134A variant, Arg107 interacted with D-2CP, while in Y135A, Gln221 and Arg231 interacted with D-2CP. It is our emphatic belief that the new model will be useful for the rational design of DehDs with enhanced potentials.

2D to 3D crossover of the magnetic properties in ordered arrays of iron oxide nanocrystals

DEFF Research Database (Denmark)

Faure, Bertrand; Wetterskog, Erik; Gunnarsson, Klas

2013-01-01

The magnetic 2D to 3D crossover behavior of well-ordered arrays of monodomain γ-Fe2O3 spherical nanoparticles with different thicknesses has been investigated by magnetometry and Monte Carlo (MC) simulations. Using the structural information of the arrays obtained from grazing incidence small-ang...

Interactive virtual simulation using a 3D computer graphics model for microvascular decompression surgery.

Science.gov (United States)

Oishi, Makoto; Fukuda, Masafumi; Hiraishi, Tetsuya; Yajima, Naoki; Sato, Yosuke; Fujii, Yukihiko

2012-09-01

The purpose of this paper is to report on the authors' advanced presurgical interactive virtual simulation technique using a 3D computer graphics model for microvascular decompression (MVD) surgery. The authors performed interactive virtual simulation prior to surgery in 26 patients with trigeminal neuralgia or hemifacial spasm. The 3D computer graphics models for interactive virtual simulation were composed of the brainstem, cerebellum, cranial nerves, vessels, and skull individually created by the image analysis, including segmentation, surface rendering, and data fusion for data collected by 3-T MRI and 64-row multidetector CT systems. Interactive virtual simulation was performed by employing novel computer-aided design software with manipulation of a haptic device to imitate the surgical procedures of bone drilling and retraction of the cerebellum. The findings were compared with intraoperative findings. In all patients, interactive virtual simulation provided detailed and realistic surgical perspectives, of sufficient quality, representing the lateral suboccipital route. The causes of trigeminal neuralgia or hemifacial spasm determined by observing 3D computer graphics models were concordant with those identified intraoperatively in 25 (96%) of 26 patients, which was a significantly higher rate than the 73% concordance rate (concordance in 19 of 26 patients) obtained by review of 2D images only (p computer graphics model provided a realistic environment for performing virtual simulations prior to MVD surgery and enabled us to ascertain complex microsurgical anatomy.

The solvent at antigen-binding site regulated C3d-CR2 interactions through the C-terminal tail of C3d at different ion strengths: insights from molecular dynamics simulation.

Science.gov (United States)

Zhang, Yan; Guo, Jingjing; Li, Lanlan; Liu, Xuewei; Yao, Xiaojun; Liu, Huanxiang

2016-10-01

The interactions of complement receptor 2 (CR2) and the degradation fragment C3d of complement component C3 play important links between the innate and adaptive immune systems. Due to the importance of C3d-CR2 interaction in the design of vaccines and inhibitors, a number of studies have been performed to investigate C3d-CR2 interaction. Many studies have indicated C3d-CR2 interactions are ionic strength-dependent. To investigate the molecular mechanism of C3d-CR2 interaction and the origin of effects of ionic strength, molecular dynamics simulations for C3d-CR2 complex together with the energetic and structural analysis were performed. Our results revealed the increased interactions between charged protein and ions weaken C3d-CR2 association, as ionic strengths increase. Moreover, ion strengths have similar effects on antigen-binding site and CR2 binding site. Meanwhile, Ala17 and Gln20 will transform between the activated and non-activated states mediated by His133 and Glu135 at different ion strengths. Our results reveal the origins of the effects of ionic strengths on C3d-CR2 interactions are due to the changes of water, ion occupancies and distributions. This study uncovers the origin of the effect of ionic strength on C3d-CR2 interaction and deepens the understanding of the molecular mechanism of their interaction, which is valuable for the design of vaccines and small molecule inhibitors. Copyright © 2016 Elsevier B.V. All rights reserved.

Site-specific strong ground motion prediction using 2.5-D modelling

Science.gov (United States)

Narayan, J. P.

2001-08-01

An algorithm was developed using the 2.5-D elastodynamic wave equation, based on the displacement-stress relation. One of the most significant advantages of the 2.5-D simulation is that the 3-D radiation pattern can be generated using double-couple point shear-dislocation sources in the 2-D numerical grid. A parsimonious staggered grid scheme was adopted instead of the standard staggered grid scheme, since this is the only scheme suitable for computing the dislocation. This new 2.5-D numerical modelling avoids the extensive computational cost of 3-D modelling. The significance of this exercise is that it makes it possible to simulate the strong ground motion (SGM), taking into account the energy released, 3-D radiation pattern, path effects and local site conditions at any location around the epicentre. The slowness vector (py) was used in the supersonic region for each layer, so that all the components of the inertia coefficient are positive. The double-couple point shear-dislocation source was implemented in the numerical grid using the moment tensor components as the body-force couples. The moment per unit volume was used in both the 3-D and 2.5-D modelling. A good agreement in the 3-D and 2.5-D responses for different grid sizes was obtained when the moment per unit volume was further reduced by a factor equal to the finite-difference grid size in the case of the 2.5-D modelling. The components of the radiation pattern were computed in the xz-plane using 3-D and 2.5-D algorithms for various focal mechanisms, and the results were in good agreement. A comparative study of the amplitude behaviour of the 3-D and 2.5-D wavefronts in a layered medium reveals the spatial and temporal damped nature of the 2.5-D elastodynamic wave equation. 3-D and 2.5-D simulated responses at a site using a different strike direction reveal that strong ground motion (SGM) can be predicted just by rotating the strike of the fault counter-clockwise by the same amount as the azimuth of

Flood hazard assessment using 1D and 2D approaches

Science.gov (United States)

Petaccia, Gabriella; Costabile, Pierfranco; Macchione, Francesco; Natale, Luigi

2013-04-01

The EU flood risk Directive (Directive 2007/60/EC) prescribes risk assessment and mapping to develop flood risk management plans. Flood hazard mapping may be carried out with mathematical models able to determine flood-prone areas once realistic conditions (in terms of discharge or water levels) are imposed at the boundaries of the case study. The deterministic models are mainly based on shallow water equations expressed in their 1D or 2D formulation. The 1D approach is widely used, especially in technical studies, due to its relative simplicity, its computational efficiency and also because it requires topographical data not as expensive as the ones needed by 2D models. Even if in a great number of practical situations, such as modeling in-channel flows and not too wide floodplains, the 1D approach may provide results close to the prediction of a more sophisticated 2D model, it must be pointed out that the correct use of a 1D model in practical situations is more complex than it may seem. The main issues to be correctly modeled in a 1D approach are the definition of hydraulic structures such as bridges and buildings interacting with the flow and the treatment of the tributaries. Clearly all these aspects have to be taken into account also in the 2D modeling, but with fewer difficulties. The purpose of this paper is to show how the above cited issues can be described using a 1D or 2D unsteady flow modeling. In particular the Authors will show the devices that have to be implemented in 1D modeling to get reliable predictions of water levels and discharges comparable to the ones obtained using a 2D model. Attention will be focused on an actual river (Crati river) located in the South of Italy. This case study is quite complicated since it deals with the simulation of channeled flows, overbank flows, interactions with buildings, bridges and tributaries. Accurate techniques, intentionally developed by the Authors to take into account all these peculiarities in 1D and 2

Characterization of an SRF gun: a 3D full wave simulation

International Nuclear Information System (INIS)

Wang, E.; Ben-Zvi, I.; Wang, J.

2011-01-01

We characterized a BNL 1.3GHz half-cell SRF gun is tested for GaAs photocathode. The gun already was simulated several years ago via two-dimensional (2D) numerical codes (i.e., Superfish and Parmela) with and without the beam. In this paper, we discuss our investigation of its characteristics using a three dimensional (3D) full-wave code (CST STUDIO SUITE(trademark)).The input/pickup couplers are sited symmetrically on the same side of the gun at an angle of 180 o . In particular, the inner conductor of the pickup coupler is considerably shorter than that of the input coupler. We evaluated the cross-talk between the beam (trajectory) and the signal on the input coupler compared our findings with published results based on analytical models. The CST STUDIO SUITE(trademark) also was used to predict the field within the cavity; particularly, a combination of transient/eigenmode solvers was employed to accurately construct the RF field for the particles, which also includes the effects of the couplers. Finally, we explored the beam's dynamics with a particle in cell (PIC) simulation, validated the results and compare them with 2D code result.

Development of a Closed Loop Simulator for Poloidal Field Control in DIII-D

International Nuclear Information System (INIS)

J.A. Leuer; M.L. Walker; D.A. Humphreys; J.R. Ferron; A. Nerem; B.G. Penaflor

1999-01-01

The design of a model-based simulator of the DIII-D poloidal field system is presented. The simulator is automatically configured to match a particular DIII-D discharge circuit. The simulator can be run in a data input mode, in which prior acquired DIII-D shot data is input to the simulator, or in a stand-alone predictive mode, in which the model operates in closed loop with the plasma control system. The simulator is used to design and validate a multi-input-multi-output controller which has been implemented on DIII-D to control plasma shape. Preliminary experimental controller results are presented

Geant4 simulation of ion chambers response to 60Co spectrum of LNMRI/IRD Shepherd 81-14D Radiator

Science.gov (United States)

Queiroz Filho, P. P.; Da Silva, C. N. M.

2018-03-01

The National Ionizing Radiation Metrology Laboratory of the Radioprotection and Dosimetry Institute (LNMRI / IRD) has recently acquired a Shepherd 81-14D Radiator. In this work we simulate, using Geant4, the behavior with the inverse square law radiation for 3 models of PTW spherical chambers used in radioprotection, a relevant information to planning the measurements. We did the corrections for the attenuation and scattering in the air for each distance, where we used the 60Co spectrum simulated previously.

Background and Pickup Ion Velocity Distribution Dynamics in Titan's Plasma Environment: 3D Hybrid Simulation and Comparison with CAPS T9 Observations

Science.gov (United States)

Lipatov, A. S.; Sittler, E. C., Jr.; Hartle, R. E.; Cooper, J. F.; Simpson, D. G.

2011-01-01

In this report we discuss the ion velocity distribution dynamics from the 3D hybrid simulation. In our model the background, pickup, and ionospheric ions are considered as a particles, whereas the electrons are described as a fluid. Inhomogeneous photoionization, electron-impact ionization and charge exchange are included in our model. We also take into account the collisions between the ions and neutrals. The current simulation shows that mass loading by pickup ions H(+); H2(+), CH4(+) and N2(+) is stronger than in the previous simulations when O+ ions are introduced into the background plasma. In our hybrid simulations we use Chamberlain profiles for the atmospheric components. We also include a simple ionosphere model with average mass M = 28 amu ions that were generated inside the ionosphere. The moon is considered as a weakly conducting body. Special attention will be paid to comparing the simulated pickup ion velocity distribution with CAPS T9 observations. Our simulation shows an asymmetry of the ion density distribution and the magnetic field, including the formation of the Alfve n wing-like structures. The simulation also shows that the ring-like velocity distribution for pickup ions relaxes to a Maxwellian core and a shell-like halo.

Graphical interface for the physics-based generation of inputs to 3D MEEC SGEMP and SREMP simulations

International Nuclear Information System (INIS)

Bland, M; Walters, D; Wondra, J

1999-01-01

A graphical user interface (GUI) is under development for the MEEC family of SGEMP and SREMP simulation codes [1,2]. These codes are ''workhorse'' legacy codes that have been in use for nearly two decades, with modifications and enhanced physics models added throughout the years. The MEEC codes are currently being evaluated for use by the DOE in the Dual Revalidation Program and experiments at NIF. The new GUI makes the codes more accessible and less prone to input errors by automatically generating the parameters and grids that previously had to be designed ''by hand''. Physics-based algorithms define the simulation volume with expanding meshes. Users are able to specify objects, materials, and emission surfaces through dialogs and input boxes. 3D and orthographic views are available to view objects in the volume. Zone slice views are available for stepping through the overlay of objects on the mesh in planes aligned with the primary axes

Light field morphing using 2D features.

Science.gov (United States)

Wang, Lifeng; Lin, Stephen; Lee, Seungyong; Guo, Baining; Shum, Heung-Yeung

2005-01-01

We present a 2D feature-based technique for morphing 3D objects represented by light fields. Existing light field morphing methods require the user to specify corresponding 3D feature elements to guide morph computation. Since slight errors in 3D specification can lead to significant morphing artifacts, we propose a scheme based on 2D feature elements that is less sensitive to imprecise marking of features. First, 2D features are specified by the user in a number of key views in the source and target light fields. Then the two light fields are warped view by view as guided by the corresponding 2D features. Finally, the two warped light fields are blended together to yield the desired light field morph. Two key issues in light field morphing are feature specification and warping of light field rays. For feature specification, we introduce a user interface for delineating 2D features in key views of a light field, which are automatically interpolated to other views. For ray warping, we describe a 2D technique that accounts for visibility changes and present a comparison to the ideal morphing of light fields. Light field morphing based on 2D features makes it simple to incorporate previous image morphing techniques such as nonuniform blending, as well as to morph between an image and a light field.

2-D modelling and simulation of EM brake for liquid steel

Science.gov (United States)

Aslan, Necdet; Senturk, Kenan; Tessarotto, Massimo

2003-11-01

The problem of EM control of bottom tapping in steelmaking metallurgy is an old and well known challenge not only from the technological viewpoint but also, potentially, an interesting and still open theoretical problem, from the viewpoint of the investigation of the detailed MHD phenomena occurring in EM braking devices [1]. Purpose of the present work is the formulation of a 2-D MHD model for a DC EM braking device, which includes the consistent modelization of inductive EM fields produced by the conductive fluid, large scale turbulence, boundary conditions for the EM fields and thermal effects. The mathematical model has been implemented in a new 2-D MHD code developed for this purpose [2], based on the so-called fluctuation splitting and dual-time stepping methods, respectively, to advance in time the fluid fields and satisfy the relevant incompressibility-solenoidality conditions for the fluid mass velocity and the magnetic field. Main goal of the investigation is the analysis of the nonlinear phenomena occurring in the process of slowing down of a column of liquid steel under the action of the EM brake, and in particular the detailed description of the effects of large scale turbulence produced by the action of Lorentz force on the fluid, their influence on the magnitude of the inductive EM fields and the performance of the EM brake itself. REFERENCES [1] A.Codutti, A.Martinis, M.Pavlicevic, M.Tessarotto and D.Batic, Proc. 3rd International Symposium on EMP (Nagoya, Japan, April 2000), p.530 (2000). [2] N.Aslan, K.Senturk and M.Tessarotto, Efficient 2-D solver for incompressible magnefluids, communication at this Conference (2003).

D*± meson production at low Q2 with the H1 detector and determination of unintegrated gluon densities

International Nuclear Information System (INIS)

Cholewa, Axel

2011-02-01

A study of inclusive D *± meson production in deep inelastic electron-proton scattering at the H1 detector is presented for low photon virtualities. The results of these measurements have been used to determine unintegrated gluon densities with the Monte Carlo generator CASCADE. The phase space of the measurement is defined by photon virtualities inside 2 GeV 2 2 2 , and inelasticities inside 0.02 *± mesons is restricted to pseudo rapidities of vertical stroke η D * vertical stroke t D * >1.5 GeV and complements D *± meson production measurements at higher photon virtualities. Data taken in the years 2004-2007 during the HERA II running period have been analyzed yielding an integrated luminosity of 348 pb -1 . This significant increase in statistics compared to HERA I was exploited in the single and double differential cross sections which have been measured more differentiated than in previous measurements at H1. The single differential cross sections have been used in parameter fits of unintegrated gluon densities. For this purpose scattering events in electron-proton collisions were simulated with the Monte Carlo generator CASCADE and the deviation of the prediction of the simulation from the measured data was then minimized with the χ 2 method. Three different parametrizations of unintegrated gluon distributions have been used and compared. (orig.)

Cell Migration in 1D and 2D Nanofiber Microenvironments.

Science.gov (United States)

Estabridis, Horacio M; Jana, Aniket; Nain, Amrinder; Odde, David J

2018-03-01

Understanding how cells migrate in fibrous environments is important in wound healing, immune function, and cancer progression. A key question is how fiber orientation and network geometry influence cell movement. Here we describe a quantitative, modeling-based approach toward identifying the mechanisms by which cells migrate in fibrous geometries having well controlled orientation. Specifically, U251 glioblastoma cells were seeded onto non-electrospinning Spinneret based tunable engineering parameters fiber substrates that consist of networks of suspended 400 nm diameter nanofibers. Cells were classified based on the local fiber geometry and cell migration dynamics observed by light microscopy. Cells were found in three distinct geometries: adhering two a single fiber, adhering to two parallel fibers, and adhering to a network of orthogonal fibers. Cells adhering to a single fiber or two parallel fibers can only move in one dimension along the fiber axis, whereas cells on a network of orthogonal fibers can move in two dimensions. We found that cells move faster and more persistently in 1D geometries than in 2D, with cell migration being faster on parallel fibers than on single fibers. To explain these behaviors mechanistically, we simulated cell migration in the three different geometries using a motor-clutch based model for cell traction forces. Using nearly identical parameter sets for each of the three cases, we found that the simulated cells naturally replicated the reduced migration in 2D relative to 1D geometries. In addition, the modestly faster 1D migration on parallel fibers relative to single fibers was captured using a correspondingly modest increase in the number of clutches to reflect increased surface area of adhesion on parallel fibers. Overall, the integrated modeling and experimental analysis shows that cell migration in response to varying fibrous geometries can be explained by a simple mechanical readout of geometry via a motor-clutch mechanism.

Nanoindentation of ZrO{sub 2} and ZrO{sub 2}/Zr systems by molecular dynamics simulation

Energy Technology Data Exchange (ETDEWEB)

Lu, Zizhe; Chernatynskiy, Aleksandr; Noordhoek, Mark J.; Sinnott, Susan B.; Phillpot, Simon R., E-mail: sphil@mse.ufl.edu

2017-04-01

The deformation behaviors of cubic zirconia and a cubic zirconia thin film on top of an hcp zirconium substrate are investigated using molecular dynamics nanoindentation simulation. Interatomic interactions are described by the previously developed Charge Optimized Many Body (COMB) potential for the Zr-ZrO{sub 2}-O{sub 2} system. The load-displacement curves, deformation processes and hardnesses of zirconia and the zirconia/zirconium systems are characterized. In addition, by comparing with a previous nanoindentation simulation on zirconium, the effects of the zirconia layer on top on the mechanical properties of the zirconium substrate are determined.

Unsteady 3D flow simulations in cranial arterial tree

Science.gov (United States)

Grinberg, Leopold; Anor, Tomer; Madsen, Joseph; Karniadakis, George

2008-11-01

High resolution unsteady 3D flow simulations in major cranial arteries have been performed. Two cases were considered: 1) a healthy volunteer with a complete Circle of Willis (CoW); and 2) a patient with hydrocephalus and an incomplete CoW. Computation was performed on 3344 processors of the new half petaflop supercomputer in TACC. Two new numerical approaches were developed and implemented: 1) a new two-level domain decomposition method, which couples continuous and discontinuous Galerkin discretization of the computational domain; and 2) a new type of outflow boundary conditions, which imposes, in an accurate and computationally efficient manner, clinically measured flow rates. In the first simulation, a geometric model of 65 cranial arteries was reconstructed. Our simulation reveals a high degree of asymmetry in the flow at the left and right parts of the CoW and the presence of swirling flow in most of the CoW arteries. In the second simulation, one of the main findings was a high pressure drop at the right anterior communicating artery (PCA). Due to the incompleteness of the CoW and the pressure drop at the PCA, the right internal carotid artery supplies blood to most regions of the brain.

APROS 3-D core models for simulators and plant analyzers

International Nuclear Information System (INIS)

Puska, E.K.

1999-01-01

The 3-D core models of APROS simulation environment can be used in simulator and plant analyzer applications, as well as in safety analysis. The key feature of APROS models is that the same physical models can be used in all applications. For three-dimensional reactor cores the APROS models cover both quadratic BWR and PWR cores and the hexagonal lattice VVER-type cores. In APROS environment the user can select the number of flow channels in the core and either five- or six-equation thermal hydraulic model for these channels. The thermal hydraulic model and the channel description have a decisive effect on the calculation time of the 3-D core model and thus just these selection make at present the major difference between a safety analysis model and a training simulator model. The paper presents examples of various types of 3-D LWR-type core descriptions for simulator and plant analyzer use and discusses the differences of calculation speed and physical results between a typical safety analysis model description and a real-time simulator model description in transients. (author)

A poor metabolizer of both CYP2C19 and CYP2D6 identified by mechanistic pharmacokinetic simulation in a fatal drug poisoning case involving venlafaxine

DEFF Research Database (Denmark)

Jornil, J; Nielsen, T S; Rosendal, I

2013-01-01

Abstract We present a fatal drug poisoning case involving venlafaxine (VEN). The deceased took his medication regularly (including 150 mg VEN twice daily), and nothing in the case or autopsy findings pointed towards suicide. The toxicological assessment concluded that the cause of death was most...... combined with genotyping were considered very useful in this fatal drug poisoning case. Keywords CYP2D6; CYP2C19; Venlafaxine; Poor metabolizer; Drug poisoning; Mechanistic pharmacokinetic simulation --------------------------------------------------------------------------------...

Validation of SWAT+ at field level and comparison with previous SWAT models in simulating hydrologic quantity

Science.gov (United States)

GAO, J.; White, M. J.; Bieger, K.; Yen, H.; Arnold, J. G.

2017-12-01

Over the past 20 years, the Soil and Water Assessment Tool (SWAT) has been adopted by many researches to assess water quantity and quality in watersheds around the world. As the demand increases in facilitating model support, maintenance, and future development, the SWAT source code and data have undergone major modifications over the past few years. To make the model more flexible in terms of interactions of spatial units and processes occurring in watersheds, a completely revised version of SWAT (SWAT+) was developed to improve SWAT's ability in water resource modelling and management. There are only several applications of SWAT+ in large watersheds, however, no study pays attention to validate the new model at field level and assess its performance. To test the basic hydrologic function of SWAT+, it was implemented in five field cases across five states in the U.S. and compared the SWAT+ created results with that from the previous models at the same fields. Additionally, an automatic calibration tool was used to test which model is easier to be calibrated well in a limited number of parameter adjustments. The goal of the study was to evaluate the performance of SWAT+ in simulating stream flow on field level at different geographical locations. The results demonstrate that SWAT+ demonstrated similar performance with previous SWAT model, but the flexibility offered by SWAT+ via the connection of different spatial objects can result in a more accurate simulation of hydrological processes in spatial, especially for watershed with artificial facilities. Autocalibration shows that SWAT+ is much easier to obtain a satisfied result compared with the previous SWAT. Although many capabilities have already been enhanced in SWAT+, there exist inaccuracies in simulation. This insufficiency will be improved with advancements in scientific knowledge on hydrologic process in specific watersheds. Currently, SWAT+ is prerelease, and any errors are being addressed.

On the resolving power of 2-D interferometry

International Nuclear Information System (INIS)

Padula, Sandra S.

1996-01-01

A resonance gas model previously proposed is here briefly reviewed in order to illustrate some of the geometrical and dynamical effects that could distort the behavior of the two pion correlation function. The main of these effects - the resonance decaying into pions - has earlier been conceived as a possible means to probe resonance abundances at different energy ranges. However, reinforcing previous studies, we show here that the conventional 1-D projection of the correlation function does not allow for clear conclusions. Instead, we propose to use the 2-D projection associated to a 2-D X 2 analysis, which substantially enhances the resolving power of interferometry to differentiate decoupling geometries of distinct dynamical models. This result is achieved by studying the variation of the mean X 2 per degrees of freedom with respect to the range of the analysis in the ( qT , qL ) plane. The preliminary E802 data on Si + Au at 14.6 A GeV/c, used here for illustrating the method, seem to rule out dynamical models with high ω, η resonance formation yields. (author)

Quantitative comparisons between experimentally measured 2-D carbon radiation and Monte Carlo impurity (MCI) code simulations

International Nuclear Information System (INIS)

Evans, T.E.; Leonard, A.W.; West, W.P.; Finkenthal, D.F.; Fenstermacher, M.E.; Porter, G.D.

1998-08-01

Experimentally measured carbon line emissions and total radiated power distributions from the DIII-D divertor and Scrape-Off Layer (SOL) are compared to those calculated with the Monte Carlo Impurity (MCI) model. A UEDGE background plasma is used in MCI with the Roth and Garcia-Rosales (RG-R) chemical sputtering model and/or one of six physical sputtering models. While results from these simulations do not reproduce all of the features seen in the experimentally measured radiation patterns, the total radiated power calculated in MCI is in relatively good agreement with that measured by the DIII-D bolometric system when the Smith78 physical sputtering model is coupled to RG-R chemical sputtering in an unaltered UEDGE plasma. Alternatively, MCI simulations done with UEDGE background ion temperatures along the divertor target plates adjusted to better match those measured in the experiment resulted in three physical sputtering models which when coupled to the RG-R model gave a total radiated power that was within 10% of measured value

Magnetic flux pumping in 3D nonlinear magnetohydrodynamic simulations

Science.gov (United States)

Krebs, I.; Jardin, S. C.; Günter, S.; Lackner, K.; Hoelzl, M.; Strumberger, E.; Ferraro, N.

2017-10-01

A self-regulating magnetic flux pumping mechanism in tokamaks that maintains the core safety factor at q ≈1 , thus preventing sawteeth, is analyzed in nonlinear 3D magnetohydrodynamic simulations using the M3D-C1 code. In these simulations, the most important mechanism responsible for the flux pumping is that a saturated (m =1 ,n =1 ) quasi-interchange instability generates an effective negative loop voltage in the plasma center via a dynamo effect. It is shown that sawtoothing is prevented in the simulations if β is sufficiently high to provide the necessary drive for the (m =1 ,n =1 ) instability that generates the dynamo loop voltage. The necessary amount of dynamo loop voltage is determined by the tendency of the current density profile to centrally peak which, in our simulations, is controlled by the peakedness of the applied heat source profile.

A numerical simulation of VIV on a flexible circular cylinder

International Nuclear Information System (INIS)

Xie Fangfang; Deng Jian; Zheng Yao; Xiao Qing

2012-01-01

In this paper, numerical simulations of a flexible circular cylinder subjected to a vortex-induced vibration (VIV) are conducted. The Reynolds number for simulations is fixed at 1000. The finite volume method is applied for modeling fluid flow with the moving meshes feature. The dynamic response of a flexible cylinder fixed at both ends is modeled by the Euler–Bernoulli beam theory. The comparison between two-dimensional (2D) simulations and 3D simulations for the flexible cylinder shows that the maximum response amplitude of the cross-flow oscillation is about 0.57D for 2D rigid cylinders (modeled by a spring–damper–mass model) and 1.03D for flexible cylinders, respectively. The results from 3D simulations are closer to previous experimental results. Furthermore, the results obtained with various frequency ratios show that different wake patterns exist according to the frequency ratio, such as 2S mode, 2P mode and some more complicated modes. The wake pattern is different at various sections along the cylinder length, due to the fact that the two ends of the beam are fixed. The vibration of the flexible cylinder can also greatly alter the three dimensionality in the wake, which is our research in future work, especially in the transition region for Reynolds number ranging from 170 to 300. (paper)

A 2D modeling approach for fluid propagation during FE-forming simulation of continuously reinforced composites in wet compression moulding

Science.gov (United States)

Poppe, Christian; Dörr, Dominik; Henning, Frank; Kärger, Luise

2018-05-01

Wet compression moulding (WCM) provides large-scale production potential for continuously fiber reinforced components as a promising alternative to resin transfer moulding (RTM). Lower cycle times are possible due to parallelization of the process steps draping, infiltration and curing during moulding (viscous draping). Experimental and theoretical investigations indicate a strong mutual dependency between the physical mechanisms, which occur during draping and mould filling (fluid-structure-interaction). Thus, key process parameters, like fiber orientation, fiber volume fraction, cavity pressure and the amount and viscosity of the resin are physically coupled. To enable time and cost efficient product and process development throughout all design stages, accurate process simulation tools are desirable. Separated draping and mould filling simulation models, as appropriate for the sequential RTM-process, cannot be applied for the WCM process due to the above outlined physical couplings. Within this study, a two-dimensional Darcy-Propagation-Element (DPE-2D) based on a finite element formulation with additional control volumes (FE/CV) is presented, verified and applied to forming simulation of a generic geometry, as a first step towards a fluid-structure-interaction model taking into account simultaneous resin infiltration and draping. The model is implemented in the commercial FE-Solver Abaqus by means of several user subroutines considering simultaneous draping and 2D-infiltration mechanisms. Darcy's equation is solved with respect to a local fiber orientation. Furthermore, the material model can access the local fluid domain properties to update the mechanical forming material parameter, which enables further investigations on the coupled physical mechanisms.

Implementation of virtual models from sheet metal forming simulation into physical 3D colour models using 3D printing

Science.gov (United States)

Junk, S.

2016-08-01

Today the methods of numerical simulation of sheet metal forming offer a great diversity of possibilities for optimization in product development and in process design. However, the results from simulation are only available as virtual models. Because there are any forming tools available during the early stages of product development, physical models that could serve to represent the virtual results are therefore lacking. Physical 3D-models can be created using 3D-printing and serve as an illustration and present a better understanding of the simulation results. In this way, the results from the simulation can be made more “comprehensible” within a development team. This paper presents the possibilities of 3D-colour printing with particular consideration of the requirements regarding the implementation of sheet metal forming simulation. Using concrete examples of sheet metal forming, the manufacturing of 3D colour models will be expounded upon on the basis of simulation results.

Examining the role of dopamine D2 and D3 receptors in Pavlovian conditioned approach behaviors.

Science.gov (United States)

Fraser, Kurt M; Haight, Joshua L; Gardner, Eliot L; Flagel, Shelly B

2016-05-15

Elucidating the neurobiological mechanisms underlying individual differences in the extent to which reward cues acquire the ability to act as incentive stimuli may contribute to the development of successful treatments for addiction and related disorders. We used the sign-tracker/goal-tracker animal model to examine the role of dopamine D2 and D3 receptors in the propensity to attribute incentive salience to reward cues. Following Pavlovian training, wherein a discrete lever-cue was paired with food reward, rats were classified as sign- or goal-trackers based on the resultant conditioned response. We examined the effects of D2/D3 agonists, 7-OH-DPAT (0.01-0.32mg/kg) or pramipexole (0.032-0.32mg/kg), the D2/D3 antagonist raclopride (0.1mg/kg), and the selective D3 antagonist, SB-277011A (6 or 24mg/kg), on the expression of sign- and goal-tracking conditioned responses. The lever-cue acquired predictive value and elicited a conditioned response for sign- and goal-trackers, but only for sign-trackers did it also acquire incentive value. Following administration of either 7-OH-DPAT, pramipexole, or raclopride, the performance of the previously acquired conditioned response was attenuated for both sign- and goal-trackers. For sign-trackers, the D2/D3 agonist, 7-OH-DPAT, also attenuated the conditioned reinforcing properties of the lever-cue. The selective D3 antagonist did not affect either conditioned response. Alterations in D2/D3 receptor signaling, but not D3 signaling alone, transiently attenuate a previously acquired Pavlovian conditioned response, regardless of whether the response is a result of incentive motivational processes. These findings suggest activity at the dopamine D2 receptor is critical for a reward cue to maintain either its incentive or predictive qualities. Copyright © 2016 Elsevier B.V. All rights reserved.

Examining the Role of Dopamine D2 and D3 Receptors in Pavlovian Conditioned Approach Behaviors

Science.gov (United States)

Fraser, Kurt M.; Haight, Joshua L.; Gardner, Eliot L.; Flagel, Shelly B.

2016-01-01

Elucidating the neurobiological mechanisms underlying individual differences in the extent to which reward cues acquire the ability to act as incentive stimuli may contribute to the development of successful treatments for addiction and related disorders. We used the sign-tracker/goal-tracker animal model to examine the role of dopamine D2 and D3 receptors in the propensity to attribute incentive salience to reward cues. Following Pavlovian training, wherein a discrete lever-cue was paired with food reward, rats were classified as sign- or goal-trackers based on the resultant conditioned response. We examined the effects of D2/D3 agonists, 7-OH-DPAT (0.01–0.32 mg/kg) or pramipexole (0.032–0.32 mg/kg), the D2/D3 antagonist raclopride (0.1 mg/kg), and the selective D3 antagonist, SB-277011A (6 or 24 mg/kg), on the expression of sign- and goal-tracking conditioned responses. The lever-cue acquired predictive value and elicited a conditioned response for sign- and goal-trackers, but only for sign-trackers did it also acquire incentive value. Following administration of either 7-OH-DPAT, pramipexole, or raclopride, the performance of the previously acquired conditioned response was attenuated for both sign- and goal-trackers. For sign-trackers, the D2/D3 agonist, 7-OH-DPAT, also attenuated the conditioned reinforcing properties of the lever-cue. The selective D3 antagonist did not affect either conditioned response. Alterations in D2/D3 receptor signaling, but not D3 signaling alone, transiently attenuate a previously acquired Pavlovian conditioned response, regardless of whether the response is a result of incentive motivational processes. These findings suggest activity at the dopamine D2 receptor is critical for a reward cue to maintain either its incentive or predictive qualities. PMID:26909847

3D Simulation of External Flooding Events for the RISMC Pathway

International Nuclear Information System (INIS)

Prescott, Steven; Mandelli, Diego; Sampath, Ramprasad; Smith, Curtis; Lin, Linyu

2015-01-01

Incorporating 3D simulations as part of the Risk-Informed Safety Margins Characterization (RISMIC) Toolkit allows analysts to obtain a more complete picture of complex system behavior for events including external plant hazards. External events such as flooding have become more important recently – however these can be analyzed with existing and validated simulated physics toolkits. In this report, we describe these approaches specific to flooding-based analysis using an approach called Smoothed Particle Hydrodynamics. The theory, validation, and example applications of the 3D flooding simulation are described. Integrating these 3D simulation methods into computational risk analysis provides a spatial/visual aspect to the design, improves the realism of results, and can prove visual understanding to validate the analysis of flooding.

3D Simulation of External Flooding Events for the RISMC Pathway

Energy Technology Data Exchange (ETDEWEB)

Prescott, Steven [Idaho National Lab. (INL), Idaho Falls, ID (United States); Mandelli, Diego [Idaho National Lab. (INL), Idaho Falls, ID (United States); Sampath, Ramprasad [Idaho National Lab. (INL), Idaho Falls, ID (United States); Smith, Curtis [Idaho National Lab. (INL), Idaho Falls, ID (United States); Lin, Linyu [Idaho National Lab. (INL), Idaho Falls, ID (United States)

2015-09-01

Incorporating 3D simulations as part of the Risk-Informed Safety Margins Characterization (RISMIC) Toolkit allows analysts to obtain a more complete picture of complex system behavior for events including external plant hazards. External events such as flooding have become more important recently – however these can be analyzed with existing and validated simulated physics toolkits. In this report, we describe these approaches specific to flooding-based analysis using an approach called Smoothed Particle Hydrodynamics. The theory, validation, and example applications of the 3D flooding simulation are described. Integrating these 3D simulation methods into computational risk analysis provides a spatial/visual aspect to the design, improves the realism of results, and can prove visual understanding to validate the analysis of flooding.

Previously unreported abnormalities in Wolfram Syndrome Type 2.

Science.gov (United States)

Akturk, Halis Kaan; Yasa, Seda

2017-01-01

Wolfram syndrome (WFS) is a rare autosomal recessive disease with non-autoimmune childhood onset insulin dependent diabetes and optic atrophy. WFS type 2 (WFS2) differs from WFS type 1 (WFS1) with upper intestinal ulcers, bleeding tendency and the lack ofdiabetes insipidus. Li-fespan is short due to related comorbidities. Only a few familieshave been reported with this syndrome with the CISD2 mutation. Here we report two siblings with a clinical diagnosis of WFS2, previously misdiagnosed with type 1 diabetes mellitus and diabetic retinopathy-related blindness. We report possible additional clinical and laboratory findings that have not been pre-viously reported, such as asymptomatic hypoparathyroidism, osteomalacia, growth hormone (GH) deficiency and hepatomegaly. Even though not a requirement for the diagnosis of WFS2 currently, our case series confirm hypogonadotropic hypogonadism to be also a feature of this syndrome, as reported before. © Polish Society for Pediatric Endocrinology and Diabetology.

[Accuracy of morphological simulation for orthognatic surgery. Assessment of a 3D image fusion software.

Science.gov (United States)

Terzic, A; Schouman, T; Scolozzi, P

2013-08-06

The CT/CBCT data allows for 3D reconstruction of skeletal and untextured soft tissue volume. 3D stereophotogrammetry technology has strongly improved the quality of facial soft tissue surface texture. The combination of these two technologies allows for an accurate and complete reconstruction. The 3D virtual head may be used for orthognatic surgical planning, virtual surgery, and morphological simulation obtained with a software dedicated to the fusion of 3D photogrammetric and radiological images. The imaging material include: a multi-slice CT scan or broad field CBCT scan, a 3D photogrammetric camera. The operative image processing protocol includes the following steps: 1) pre- and postoperative CT/CBCT scan and 3D photogrammetric image acquisition; 2) 3D image segmentation and fusion of untextured CT/CBCT skin with the preoperative textured facial soft tissue surface of the 3D photogrammetric scan; 3) image fusion of the pre- and postoperative CT/CBCT data set virtual osteotomies, and 3D photogrammetric soft tissue virtual simulation; 4) fusion of virtual simulated 3D photogrammetric and real postoperative images, and assessment of accuracy using a color-coded scale to measure the differences between the two surfaces. Copyright © 2013. Published by Elsevier Masson SAS.

Efficient performance simulation of class D amplifier output stages

DEFF Research Database (Denmark)

Nyboe, Flemming; Risbo, Lars; Andreani, Pietro

2005-01-01

Straightforward simulation of amplifier distortion involves transient simulation of operation on a sine wave input signal, and a subsequent FFT of the output voltage. This approach is very slow on class D amplifiers, since the switching behavior forces simulation time steps that are many orders...... of magnitude smaller than the duration of one period of an audio sine wave. This work presents a method of simulating the amplifier transfer characteristic using a minimum amount of simulation time, and then deriving THD from the results....

On d=2 Regge calculus without triangulation

International Nuclear Information System (INIS)

Foerster, D.

1987-01-01

The supersymmetric version of a previously developed Regge calculus for d=2 euclidean gravity is given. In the context of string theory, a continuum theory is likely to exist for D<2 external space-time dimensions, just like in the bosonic case and essentially in agreement with the weak coupling regime D≤1 found by Gervais and Neveu for Liouville theory and its supersymmetric extension. The techniques developed here are intended to be of use, eventually, in lowering the critical dimensions of string theories. (orig.)

Effective viscosity of 2D suspensions - Confinement effects

Science.gov (United States)

Peyla, Philippe; Priem, Stephane; Vincent, Doyeux; Farutin, Alexander; Ismail, Mourad

2014-11-01

We study the rheology of a sheared 2D suspension of non-Brownian disks in presence of walls. Although, it is of course possible today with modern computers and powerful algorithms to perform direct numerical simulations that fully account for multiparticle 3D interactions, the analysis of the simple case of a 2D suspension, provides valuable insights and helps to understand 3D results. For instance, we examine the role of particle-wall and particle-particle interactions in determining the rheology of confined sheared suspensions. In addition we evaluate the intrinsic viscosity as well as the contribution of hydrodynamic interactions to the dissipation as a function of a wide range of confinements. Thanks to the direct visualisation of the whole 2D Stokes flow, we are able to give a clear interpretation about the rheology of semi-dilute confined suspensions.

Effect of 24,25-dihydroxyvitamin D3 on 1,25-dihydroxyvitamin D3 [1,25-(OH)2D3] metabolism in vitamin D-deficient rats infused with 1,25-(OH)2D3

International Nuclear Information System (INIS)

Yamato, H.; Matsumoto, T.; Fukumoto, S.; Ikeda, K.; Ishizuka, S.; Ogata, E.

1989-01-01

Previous studies revealed that administration of 24,25-dihydroxyvitamin D3 [24,25-(OH)2D3] to calcium (Ca)-deficient rats causes a dose-dependent reduction in markedly elevated serum 1,25-(OH)2D3 level. Although the results suggested that the metabolism of 1,25-(OH)2D3 was accelerated by 24,25-(OH)2D3, those experiments could not define whether the enhanced metabolism of 1,25-(OH)2D3 played a role in the reduction in the serum 1,25-(OH)2D3 level. In the present study, in order to address this issue more specifically, serum 1,25-(OH)2D3 was maintained solely by exogenous administration through miniosmotic pumps of 1,25-(OH)2D3 into vitamin D-deficient rats. Thus, by measuring the serum 1,25-(OH)2D3 concentration, the effect of 24,25-(OH)2D3 on the MCR of 1,25-(OH)2D3 could be examined. Administration of 24,25-(OH)2D3 caused a dose-dependent enhancement in the MCR of 1,25-(OH)2D3, and 1 microgram/100 g rat.day 24,25-(OH)2D3, which elevated serum 24,25-(OH)2D3 to 8.6 +/- 1.3 ng/ml, significantly increased MCR and suppressed serum levels of 1,25-(OH)2D3. The effect of 24,25-(OH)2D3 on 1,25-(OH)2D3 metabolism developed with a rapid time course, and the recovery of iv injected [1 beta-3H]1,25-(OH)2D3 in blood was significantly reduced within 1 h. In addition, there was an increase in radioactivity in the water-soluble fraction of serum as well as in urine, suggesting that 1,25-(OH)2D3 is rapidly degraded to a water-soluble metabolite(s). Furthermore, the reduction in serum 1,25-(OH)2D3 was associated with a reduction in both serum and urinary Ca levels. Because the conversion of [3H]24,25-(OH)2D3 to [3H]1,24,25-(OH)2D3 or other metabolites was minimal in these rats, 24,25-(OH)2D3 appears to act without being converted into other metabolites. These results demonstrate that 24,25-(OH)2D3 rapidly stimulates the metabolism of 1,25-(OH)2D3 and reduces its serum level

2D/ 3D Quantitative Ultrasound of the Breast

Science.gov (United States)

Nasief, Haidy Gerges

Breast cancer is the second leading cause of cancer death of women in the United States, so breast cancer screening for early detection is common. The purpose of this dissertation is to optimize quantitative ultrasound (QUS) methods to improve the specificity and objectivity of breast ultrasound. To pursue this goal, the dissertation is divided into two parts: 1) to optimize 2D QUS, and 2) to introduce and validate 3D QUS. Previous studies had validated these methods in phantoms. Applying our QUS analysis on subcutaneous breast fat demonstrated that QUS parameter estimates for subcutaneous fat were consistent among different human subjects. This validated our in vivo data acquisition methods and supported the use of breast fat as a clinical reference tissue for ultrasound BI-RADSRTM assessments. Although current QUS methods perform well for straightforward cases when assumptions of stationarity and diffuse scattering are well-founded, these conditions often are not present due to the complicated nature of in vivo breast tissue. Key improvements in QUS algorithms to address these challenges were: 1) applying a "modified least squares method (MLSM)" to account for the heterogeneous tissue path between the transducer and the region of interest, ROI; 2) detecting anisotropy in acoustic parameters; and 3) detecting and removing the echo sources that depart from diffuse and stationary scattering conditions. The results showed that a Bayesian classifier combining three QUS parameters in a biased pool of high-quality breast ultrasound data successfully differentiated all fibroadenomas from all carcinomas. Given promising initial results in 2D, extension to 3D acquisitions in QUS provided a unique capability to test QUS for the entire breast volume. QUS parameter estimates using 3D data were consistent with those found in 2D for phantoms and in vivo data. Extensions of QUS technology from 2D to 3D can improve the specificity of breast ultrasound, and thus, could lead to

Large-eddy-simulation approach in understanding flow structures of 2D turbulent density currents over sloping surfaces

Science.gov (United States)

Nayamatullah, M.; Rao Pillalamarri, Narasimha; Bhaganagar, Kiran