WorldWideScience

Sample records for potential core species

  1. Potential bacterial core species associated with digital dermatitis in cattle herds identified by molecular profiling of interdigital skin samples

    DEFF Research Database (Denmark)

    Weiss Nielsen, Martin; Strube, Mikael Lenz; Isbrand, Anastasia

    2016-01-01

    of different molecular methods. Deep sequencing of the 16S rRNA gene variable regions V1–V2 showed that Treponema, Mycoplasma, Fusobacterium and Porphyromonas were the genera best differentiating the DD samples from the controls. Additional deep sequencing analysis of the most abundant genus, Treponema...... in the epidermal lesions and were present in only a subset of samples. RT-qPCR analysis showed that treponemes were also actively expressing a panel of virulence factors at the site of infection. Our results further support the hypothesis that species belonging to the genus Treponema are major pathogens of DD...... and also provide sufficient clues to motivate additional research into the role of M. fermentans, F. necrophorum and P. levii in the etiology of DD....

  2. Innovative reactor core: potentialities and design

    International Nuclear Information System (INIS)

    Artioli, C.; Petrovich, Carlo; Grasso, Giacomo

    2010-01-01

    Gen IV nuclear reactors are considered a very attractive answer for the demand of energy. Because public acceptance they have to fulfil very clearly the requirement of sustainable development. In this sense a reactor concept, having by itself a rather no significant interaction with the environment both on the front and back end ('adiabatic concept'), is vital. This goal in mind, a new way of designing such a core has to be assumed. The starting point must be the 'zero impact'. Therefore the core will be designed having as basic constraints: a) fed with only natural or depleted Uranium, and b) discharges only fission products. Meantime its potentiality as a net burner of Minor Actinide has to be carefully estimated. This activity, referred to the ELSY reactor, shows how to design such an 'adiabatic' core and states its reasonable capability of burning MA legacy in the order of 25-50 kg/GW e y. (authors)

  3. Effective core potential methods for the lanthanides

    International Nuclear Information System (INIS)

    Cundari, T.R.; Stevens, W.J.

    1993-01-01

    In this paper a complete set of effective core potentials (ECPs) and valence basis sets for the lanthanides (Ce to Lu) are derived. These ECPs are consistent not only within the lanthanide series, but also with the third-row transition metals which bracket them. A 46-electron core was chosen to provide the best compromise between computational savings and chemical accuracy. Thus, the 5s and 5p are included as ''outer'' core while all lower energy atomic orbitals (AOs) are replaced with the ECP. Generator states were chosen from the most chemically relevant +3 and +2 oxidation states. The results of atomic calculations indicate that the greatest error vs highly accurate numerical potential/large, even-tempered basis set calculations results from replacement of the large, even-tempered basis sets with more compact representations. However, the agreement among atomic calculations remains excellent with both basis set sizes, for a variety of spin and oxidation states, with a significant savings in time for the optimized valence basis set. It is expected that the compact representation of the ECPs and valence basis sets will eventually encourage their use by computational chemists to further explore the bonding and reactivity of lanthanide complexes

  4. Core-satellite species hypothesis and native versus exotic species in secondary succession

    Science.gov (United States)

    Martinez, Kelsey A.; Gibson, David J.; Middleton, Beth A.

    2015-01-01

    A number of hypotheses exist to explain species’ distributions in a landscape, but these hypotheses are not frequently utilized to explain the differences in native and exotic species distributions. The core-satellite species (CSS) hypothesis predicts species occupancy will be bimodally distributed, i.e., many species will be common and many species will be rare, but does not explicitly consider exotic species distributions. The parallel dynamics (PD) hypothesis predicts that regional occurrence patterns of exotic species will be similar to native species. Together, the CSS and PD hypotheses may increase our understanding of exotic species’ distribution relative to natives. We selected an old field undergoing secondary succession to study the CSS and PD hypotheses in conjunction with each other. The ratio of exotic to native species (richness and abundance) was observed through 17 years of secondary succession. We predicted species would be bimodally distributed and that exotic:native species ratios would remain steady or decrease through time under frequent disturbance. In contrast to the CSS and PD hypotheses, native species occupancies were not bimodally distributed at the site, but exotic species were. The exotic:native species ratios for both richness (E:Nrichness) and abundance (E:Ncover) generally decreased or remained constant throughout supporting the PD hypothesis. Our results suggest exotic species exhibit metapopulation structure in old field landscapes, but that metapopulation structures of native species are disrupted, perhaps because these species are dispersal limited in the fragmented landscape.

  5. Electronic structure of molecules using relativistic effective core potentials

    International Nuclear Information System (INIS)

    Hay, P.J.

    1983-01-01

    In this review an approach is outlined for studying molecules containing heavy atoms with the use of relativistic effective core potentials (RECP's). These potentials play the dual roles of (1) replacing the chemically-inert core electrons and (2) incorporating the mass velocity and Darwin term into a one-electron effective potential. This reduces the problem to a valence-electron problem and avoids computation of additional matrix elements involving relativistic operators. The spin-orbit effects are subsequently included using the molecular orbitals derived from the RECP calculation as a basis

  6. Incorporating trnH-psbA to the core DNA barcodes improves significantly species discrimination within southern African Combretaceae

    Directory of Open Access Journals (Sweden)

    Jephris Gere

    2013-12-01

    Full Text Available Recent studies indicate that the discriminatory power of the core DNA barcodes (rbcLa + matK for land plants may have been overestimated since their performance have been tested only on few closely related species. In this study we focused mainly on how the addition of complementary barcodes (nrITS and trnH-psbA to the core barcodes will affect the performance of the core barcodes in discriminating closely related species from family to section levels. In general, we found that the core barcodes performed poorly compared to the various combinations tested. Using multiple criteria, we finally advocated for the use of the core + trnH-psbA as potential DNA barcode for the family Combretaceae at least in southern Africa. Our results also indicate that the success of DNA barcoding in discriminating closely related species may be related to evolutionary and possibly the biogeographic histories of the taxonomic group tested.

  7. Ab initio effective core potentials for molecular calculations. Potentials for K to Au including the outermost core orbitals

    International Nuclear Information System (INIS)

    Hay, P.J.; Wadt, W.R.

    1985-01-01

    Ab initio effective core potentials (ECP's) have been generated to replace the innermost core electron for third-row (K--Au), fourth-row (Rb--Ag), and fifth-row (Cs--Au) atoms. The outermost core orbitals: corresponding to the ns 2 np 6 configuration for the three rows here: are not replaced by the ECP but are treated on an equal footing with the nd, (n+1)s and (n+1)p valence orbitals. These ECP's have been derived for use in molecular calculations where these outer core orbitals need to be treated explicitly rather than to be replaced by an ECP. The ECP's for the forth and fifth rows also incorporate the mass--velocity and Darwin relativistic effects into the potentials. Analytic fits to the potentials are presented for use in multicenter integral evaluation. Gaussian orbital valence basis sets are developed for the (3s, 3p, 3d, 4s, 4p), (4s, 4p, 4d, 5s, 5p), and (5s, 5p, 5d, 6s, 6p) ortibals of the three respective rows

  8. CHEMICAL COMPOSITION OF CAATINGA POTENTIAL FORAGES SPECIES

    Directory of Open Access Journals (Sweden)

    Dynara Layza de Souza da Silva

    2015-12-01

    Full Text Available Chemical composition of some potential forages species, natives from Caatinga region, were evaluated. Samples of Macroptilium heterophyllum, Stylosanthes humilis, Rhynchosia mínima, Desmodium tortuosum Sw. Dc, Merremia aegyptia, Mimosa tenuiflora Wild, Bauhinia cheilantha and as well Macroptilium lathyroides, Caesalpinia pyramidalis and Mimosa tenuiflora hays were collected in Rio Grande do Norte Stated, during 2011 rainy season. The analyses: dry matter (DM, crude protein (CP mineral matter (MM ether extract  (EE neutral detergent fiber (NDF, acid detergent fiber (ADF, lignin (LIG, insoluble neutral detergent nitrogen, (INDN insoluble acid detergent nitrogen, (ADIN, total phenol (TF and total tannin (TT were done at Embrapa Caprinos e Ovinos in Ceará State. Plants analyzed, as expected, for tropical species, exhibited high level of cell wall constituents, high lignifications rate and revealed substantial presence of anti nutritional compounds. However, regardless of this data, the main problem, for grazing animals, is due to its xerophytes characteristics. Most of the shrubs and trees are deciduous, losing its leaves during the dry season. In addition, herbaceous presents a very rapid lifetime cycle, germinating and senescing during the brief wet season.

  9. Potential use of cyanobacterial species in bioremediation of ...

    African Journals Online (AJOL)

    Potential use of cyanobacterial species in bioremediation of industrial effluents. ... African Journal of Biotechnology ... Abstract. This study investigated the potential degradation of industrial effluents by environmental species of cyanobacteria.

  10. Electronic structure of molecules using relativistic effective core potentials

    International Nuclear Information System (INIS)

    Hay, P.J.

    1981-01-01

    Starting with one-component Cowan-Griffin relativistic Hartree-Fock orbitals, which successfully incorporate the mass-velocity and Darwin terms present in more complicated wavefunctions such as Dirac-Hartree-Fock, one can derive relativistic effective core potentials (RECP's) to carry out molecular calculations. These potentials implicitly include the dominant relativistic terms for molecules while allowing one to use the traditional quantum chemical techniques for studying the electronic structure of molecules. The effects of spin-orbit coupling can then be included using orbitals from such calculations using an effective 1-electron, 1-center spin-orbit operator. Applications to molecular systems involving heavy atoms, show good agreement with available spectroscopic data on molecular geometries and excitation energies

  11. Antibacterial potential components of Bacillus species and ...

    African Journals Online (AJOL)

    Honey is a sweet viscous liquid produced by honey bee, Apis mellifera from the nectar of plants. Honey is a natural product that has been used from ancient times till now as food and for medicinal purpose. This study was carried out to determine the mode of action of Bacillus species and antibiotics residues in branded and ...

  12. Antioxidant potential of six pine species.

    Science.gov (United States)

    Guri, Anilda; Kefalas, Panagiotis; Roussis, Vassilios

    2006-04-01

    The aim of the study was to evaluate the antioxidant efficacy of extracts obtained from six Pinus species (P. pinea, P. brutia, P. radiata, P. halepensis, P. attenuata, P. nigra) growing in natural forests in Southern Greece. Specimens of fresh, dry needles and pine bark were extracted and fractionated with a variety of organic solvents and the efficient concentration and their radical scavenging activity was evaluated by the Co(II)/EDTA induced luminol plateau chemiluminescence assay. Copyright 2006 John Wiley & Sons, Ltd.

  13. The structural second virial coefficient: a spherical-core pair-potential for sulphur hexafluoride

    International Nuclear Information System (INIS)

    Mohamad Deraman; Powles, J.G.; Dore, J.C.

    1984-01-01

    Neutron diffraction data for sulphur hexafluoride gas is reanalysed following the same procedure described in our previous paper but using a spherical-core potential which was not considered in that report. The new spherical-core potential, with parameters epsilon/Ksub(B)K = 405, delta/A = 5.042 and α/A = 0.9225, gives a satisfactory fit to both the virial and structural data. There are now three model potentials, a site-site, a LJ 28-7, and this spherical core which all fit the data very well, indeed the core potential reported here fits rather better than the others. The anisotropic site-site potential is still to be preferred on physical grounds but the new core-potential will be useful where an isotopic potential suffices since it is much simpler to use. (author)

  14. Prevalence of potential toxigenic Aspergillus species isolated from ...

    African Journals Online (AJOL)

    ADEYEYE

    2015-12-17

    Dec 17, 2015 ... Aspergillus species) in feeds used in poultry farms in Sokoto metropolis. During a ... potential exists for the production of mycotoxins that may be of both veterinary public health significance and ..... The effect of antioxidant and.

  15. Ab initio effective core potentials for molecular calculations. Potentials for main group elements Na to Bi

    International Nuclear Information System (INIS)

    Wadt, W.R.; Hay, P.J.

    1985-01-01

    A consistent set of ab initio effective core potentials (ECP) has been generated for the main group elements from Na to Bi using the procedure originally developed by Kahn. The ECP's are derived from all-electron numerical Hartree--Fock atomic wave functions and fit to analytical representations for use in molecular calculations. For Rb to Bi the ECP's are generated from the relativistic Hartree--Fock atomic wave functions of Cowan which incorporate the Darwin and mass--velocity terms. Energy-optimized valence basis sets of (3s3p) primitive Gaussians are presented for use with the ECP's. Comparisons between all-electron and valence-electron ECP calculations are presented for NaF, NaCl, Cl 2 , Cl 2 - , Br 2 , Br 2 - , and Xe 2 + . The results show that the average errors introduced by the ECP's are generally only a few percent

  16. Characterization and identification of microRNA core promoters in four model species.

    Directory of Open Access Journals (Sweden)

    Xuefeng Zhou

    2007-03-01

    Full Text Available MicroRNAs are short, noncoding RNAs that play important roles in post-transcriptional gene regulation. Although many functions of microRNAs in plants and animals have been revealed in recent years, the transcriptional mechanism of microRNA genes is not well-understood. To elucidate the transcriptional regulation of microRNA genes, we study and characterize, in a genome scale, the promoters of intergenic microRNA genes in Caenorhabditis elegans, Homo sapiens, Arabidopsis thaliana, and Oryza sativa. We show that most known microRNA genes in these four species have the same type of promoters as protein-coding genes have. To further characterize the promoters of microRNA genes, we developed a novel promoter prediction method, called common query voting (CoVote, which is more effective than available promoter prediction methods. Using this new method, we identify putative core promoters of most known microRNA genes in the four model species. Moreover, we characterize the promoters of microRNA genes in these four species. We discover many significant, characteristic sequence motifs in these core promoters, several of which match or resemble the known cis-acting elements for transcription initiation. Among these motifs, some are conserved across different species while some are specific to microRNA genes of individual species.

  17. DNA Barcoding the Canadian Arctic Flora: Core Plastid Barcodes (rbcL + matK) for 490 Vascular Plant Species

    Science.gov (United States)

    Saarela, Jeffery M.; Sokoloff, Paul C.; Gillespie, Lynn J.; Consaul, Laurie L.; Bull, Roger D.

    2013-01-01

    Accurate identification of Arctic plant species is critical for understanding potential climate-induced changes in their diversity and distributions. To facilitate rapid identification we generated DNA barcodes for the core plastid barcode loci (rbcL and matK) for 490 vascular plant species, representing nearly half of the Canadian Arctic flora and 93% of the flora of the Canadian Arctic Archipelago. Sequence recovery was higher for rbcL than matK (93% and 81%), and rbcL was easier to recover than matK from herbarium specimens (92% and 77%). Distance-based and sequence-similarity analyses of combined rbcL + matK data discriminate 97% of genera, 56% of species, and 7% of infraspecific taxa. There is a significant negative correlation between the number of species sampled per genus and the percent species resolution per genus. We characterize barcode variation in detail in the ten largest genera sampled (Carex, Draba, Festuca, Pedicularis, Poa, Potentilla, Puccinellia, Ranunculus, Salix, and Saxifraga) in the context of their phylogenetic relationships and taxonomy. Discrimination with the core barcode loci in these genera ranges from 0% in Salix to 85% in Carex. Haplotype variation in multiple genera does not correspond to species boundaries, including Taraxacum, in which the distribution of plastid haplotypes among Arctic species is consistent with plastid variation documented in non-Arctic species. Introgression of Poa glauca plastid DNA into multiple individuals of P. hartzii is problematic for identification of these species with DNA barcodes. Of three supplementary barcode loci (psbA–trnH, psbK–psbI, atpF–atpH) collected for a subset of Poa and Puccinellia species, only atpF–atpH improved discrimination in Puccinellia, compared with rbcL and matK. Variation in matK in Vaccinium uliginosum and rbcL in Saxifraga oppositifolia corresponds to variation in other loci used to characterize the phylogeographic histories of these Arctic-alpine species. PMID

  18. Potential hydrocarbon producing species of Western Ghats, Tamil Nadu, India

    Energy Technology Data Exchange (ETDEWEB)

    Augustus, G.D.P.S.; Jayabalan, M.; Rajarathinam, K. [Research Centre in Bombay, V.H.N.S.N. College, Virudhunagar (India); Ray, A.K. [Sardar Patel Univ., Anand (India). Dept. of Chemistry; Seiler, G.J. [USDA, ARS, Northern Crop Science Lab., Fargo, ND (United States)

    2002-09-01

    The decline in the world supplies of hydrocarbons has led to the search for alternate sources of fuel and chemicals. Plant species are potential sources of hydrocarbons. Large-scale screening of plants growing in the Western Ghats, Tamil Nadu, India was conducted to assess the hydrocarbon production and the type of isoprene compound(s) present. Three species contained more than 3% hydrocarbon. Sarcostemma brevistigma had the highest concentration of hydrocarbon with 3.6%. Seven species contained more than 2% of hydrocarbons among the plant species screened. The hydrocarbon fraction of Ficus elastica (leaf) had a gross heat value of 9834 cal/g (41.17 MJ/kg), which is close to the caloric value of fuel oil. Six hydrocarbon fractions contained gross heat values of more than 9000 cal/g (37.68 MJ/kg). Of the 13 species hydrocarbon fraction analysed, seven species contained cis-polyisoprene compounds, while two species contained trans-polyisoprenes. Cis and trans polyisoprenes are potential alternative energy sources for fuel and/or as industrial raw materials. (author)

  19. Gas core reactor power plants designed for low proliferation potential

    International Nuclear Information System (INIS)

    Lowry, L.L.

    1977-09-01

    The feasibility of gas core nuclear power plants to provide adequate power while maintaining a low inventory and low divertability of fissile material is studied. Four concepts were examined. Two used a mixture of UF 6 and helium in the reactor cavities, and two used a uranium-argon plasma, held away from the walls by vortex buffer confinement. Power levels varied from 200 to 2500 MWth. Power plant subsystems were sized to determine their fissile material inventories. All reactors ran, with a breeding ratio of unity, on 233 U born from thorium. Fission product removal was continuous. Newly born 233 U was removed continuously from the breeding blanket and returned to the reactor cavities. The 2500-MWth power plant contained a total of 191 kg of 233 U. Less than 4 kg could be diverted before the reactor shut down. The plasma reactor power plants had smaller inventories. In general, inventories were about a factor of 10 less than those in current U.S. power reactors

  20. Larvicidal potential of Cyathea species against Culex quinquefasciatus

    Directory of Open Access Journals (Sweden)

    Johnson Marimuthu alias Antonysamy

    2017-05-01

    Full Text Available Resistance to insecticides has persuaded researchers to find new methods to control Culex quinquefasciatus proliferation. Plants may be a source of alternative agents for mosquito control due to ever-growing insecticide resistance in mosquito vectors and environmental imbalance caused by synthetic insecticides. The present study was intended to study the larvicidal activity of selected Cyathea species against the filarial vector Culex quinquefasciatus. Larvicidal potential of different extracts were evaluated and larval mortality were recorded. The larvae were more sensitive to ethanolic extracts of studied three Cyathea species when compared to other extracts. Acetone, chloroform and petroleum ether extracts were considered to be less effective. The LC50 values of different extracts ranged from 320.72 to 657.03 µg/ml. The results exhibited that the tested three Cyathea species showed concentration dependent potential larvicidal effects and also provide an indication of possible bioactive properties.

  1. Bio-fortification potential of global wild annual lentil core collection.

    Directory of Open Access Journals (Sweden)

    Sandeep Kumar

    Full Text Available Lentil, generally known as poor man's' meat due to its high protein value is also a good source of dietary fiber, antioxidants and vitamins along with fast cooking characteristics. It could be used globally as a staple food crop to eradicate hidden hunger, if this nutritionally rich crop is further enriched with essential minerals. This requires identification of essential mineral rich germplasm. So, in the present study, a core set of 96 wild accessions extracted from 405 global wild annual collections comprising different species was analyzed to determine its bio-fortification potential. Impressive variation (mg/100 g was observed for different minerals including Na (30-318, K (138.29-1578, P (37.50-593.75, Ca (4.74-188.75, Mg (15-159, Fe (2.82-14.12, Zn (1.29-12.62, Cu (0.5-7.12, Mn (1.22-9.99, Mo (1.02-11.89, Ni (0.16-3.49, Pb (0.01-0.58, Cd (0-0.03, Co (0-0.63 and As (0-0.02. Hierarchical clustering revealed high intra- and inter-specific variability. Further, correlation study showed positive significant association among minerals and between minerals including agro-morphological traits. Accessions representation from Turkey and Syria had maximum variability for different minerals. Diversity analysis exhibited wide geographical variations across gene-pool in core set. Potential use of the identified trait-specific genetic resources could be initial genetic material, for genetic base broadening and biofortification of cultivated lentil.

  2. Successive measurements of streaming potential and electroosmotic pressure with the same core-holder

    Science.gov (United States)

    Yin, Chenggang; Hu, Hengshan; Yu, Chunhao; Wang, Jun

    2018-05-01

    Successive measurements of the streaming potential and electroosmotic pressure of each core sample are important for understanding the mechanisms of electrokinetic effects. In previous studies, one plug of the core-holder needs to be replaced in these two experiments, which causes the change of the fluid parameters and the boundary conditions in the core. We design a new core-holder to permit successive experiments without plug replacement, which ensures the consistency of the measurement environment. A two-direction harmonic pressure-driving source is accordingly designed. Using this new equipment, electrokinetic experiments conducted ten core samples at 0.4 mol/L NaCl solution. The results show good agreement between the electrokinetically deduced permeability and premeasured gas permeability. For high salinity saturated samples, the permeability can be inverted from electroosmotic effect instead of the streaming potential.

  3. Nucleus-nucleus potential with repulsive core and elastic scattering. Part 1. Nucleus-nucleus interaction potential

    International Nuclear Information System (INIS)

    Davidovs'ka, O.Yi.; Denisov, V.Yu.; Nesterov, V.O.

    2010-01-01

    Various approaches for nucleus-nucleus interaction potential evaluation are discussed in details. It is shown that the antisymmetrization of nucleons belonging to different nuclei and the Pauli principle give the essential contribution into the nucleus-nucleus potential at distances, when nuclei are strongly overlapping, and lead to appearance of the repulsive core of nucleus nucleus interaction at small distances between nuclei.

  4. (Gold core)/(titania shell) nanostructures for plasmon-enhanced photon harvesting and generation of reactive oxygen species

    KAUST Repository

    Fang, Caihong; Jia, Henglei; Chang, Shuai; Ruan, Qifeng; Wang, Peng; Chen, Tao; Wang, Jianfang

    2014-01-01

    Integration of gold and titania in a nanoscale core/shell architecture can offer large active metal/semiconductor interfacial areas and avoid aggregation and reshaping of the metal nanocrystal core. Such hybrid nanostructures are very useful for studying plasmon-enhanced/enabled processes and have great potential in light-harvesting applications. Herein we report on a facile route to (gold nanocrystal core)/(titania shell) nanostructures with their plasmon band synthetically variable from ∼700 nm to over 1000 nm. The coating method has also been applied to other mono- and bi-metallic Pd, Pt, Au nanocrystals. The gold/titania nanostructures have been employed as the scattering layer in dye-sensitized solar cells, with the resultant cells exhibiting a 13.3% increase in the power conversion efficiency and a 75% decrease in the scattering-layer thickness. Moreover, under resonant excitation, the gold/titania nanostructures can efficiently utilize low-energy photons to generate reactive oxygen species, including singlet oxygen and hydroxyl radicals.

  5. Vaporization of chemical species and the production of aerosols during a core debris/concrete interaction

    International Nuclear Information System (INIS)

    Butland, A.T.D.; Mignanelli, M.A.; Potter, P.E.; Smith, P.N.

    1987-01-01

    The equilibrium chemical composition within gas bubbles sparging through isothermal molten corium-concrete mixtures has been evaluated theoretically. A series of sensitivity calculations gives some insight into a number of factors which are of importance in determining the radionuclide and non-radioactive releases during core-concrete interaction. The degree of mixing or layering of the pool has turned out to be of paramount importance in determining the magnitudes of the releases. The presence of unoxidized zirconium in the melt tends to enhance the release of a number of species and the type of concrete used for the base mat can have a significant effect. The predictions can be sensitive to the thermodynamic data used in the calculations. The vaporization of various species into the gas bubbles can require large amounts of heat; the loss of this heat from the melt can have an effect on the extent of the vaporization

  6. Comparison of the effect of soft-core potentials and Coulombic potentials on bremsstrahlung during laser matter interaction

    Science.gov (United States)

    Pandit, Rishi R.; Becker, Valerie R.; Barrington, Kasey; Thurston, Jeremy; Ramunno, Lora; Ackad, Edward

    2018-04-01

    An intense, short laser pulse incident on rare-gas clusters can produce nano-plasmas containing energetic electrons. As these electrons undergo scattering, from both phonons and ions, they emit bremsstrahlung radiation. Here, we compare a theory of bremsstrahlung emission appropriate for the interaction of intense lasers with matter using soft-core potentials and Coulombic potentials. A new scaling for the radiation cross-section and the radiated power via bremsstrahlung is derived for a soft-core potential (which depends on the potential depth) and compared with the Coulomb potential. Calculations using the new scaling are performed for electrons in vacuum ultraviolet, infrared and mid-infrared laser pulses. The radiation cross-section and the radiation power via bremsstrahlung are found to increase rapidly with increases in the potential depth of up to around 200 eV and then become mostly saturated for larger depths while remaining constant for the Coulomb potential. In both cases, the radiation cross-section and the radiation power of bremsstrahlung decrease with increases in the laser wavelength. The ratio of the scattering amplitude for the soft-core potential and that for the Coulombic potential decreases exponentially with an increase in momentum transfer. The bremsstrahlung emission by electrons in plasmas may provide a broadband light source for diagnostics.

  7. Precursors to potential severe core damage accidents: 1992, A status report

    International Nuclear Information System (INIS)

    Cox, D.F.; Cletcher, J.W.; Copinger, D.A.; Cross-Dial, A.E.; Morris, R.H.; Vanden Heuvel, L.N.; Dolan, B.W.; Jansen, J.M.; Minarick, J.W.; Lau, W.; Salyer, W.D.

    1993-12-01

    Twenty-seven operational events with conditional probabilities of subsequent severe core damage of 1.0 x 10E-06 or higher occurring at commercial light-water reactors during 1992 are considered to be precursors to potential core damage. These are described along with associated significance estimates, categorization, and subsequent analyses. The report discusses (1) the general rationale for this study, (2) the selection and documentation of events as precursors, (3) the estimation and use of conditional probabilities of subsequent severe core damage to rank precursor events, and (4) the plant models used in the analysis process

  8. Potential Ramifications of Common Core State Standards Adoption on Information Literacy

    Directory of Open Access Journals (Sweden)

    Jacob Paul Eubanks

    2014-07-01

    Full Text Available In the United States, the decline in jobs for high school educated workers and the proliferation of jobs for post-secondary educated workers is driving the development of the Common Core State Standards. The Common Core State Standards theoretically shift K-12 pedagogy towards ability development of critical and extended thinking skills, preparing high school graduates for college and career readiness. This literature review explores the reasoning behind the shift to the Common Core State Standards and asks questions regarding the potential ramifications their adoption might have on post-secondary information literacy instruction.

  9. Hypernuclear properties derived from the Nijmegen soft-core OBE potential

    International Nuclear Information System (INIS)

    Yamamoto, Yasuo; Bando, Hiroharu.

    1990-01-01

    The Nijmegen soft-core YN potential is applied to the G-matrix calculation in nuclear matter, characteristics of which are investigated in comparison with the hard-core models D and F. The ΛN G-matrix interaction is simulated in a three-range Gaussian form and applied to various hypernuclear calculations. Λ binding energies in ground and excited states are wholly reproduced from light to medium heavy hypernuclei observed in experiments. (author)

  10. Inhibitory potential of nine mentha species against pathogenic bacteria strains

    International Nuclear Information System (INIS)

    Hussain, A.; Ahmad, N.; Rashid, M.; Ikram, A. U.; Shinwari, Z. K.

    2015-01-01

    Plants produce secondary metabolites, which are used in their growth and defense against pathogenic agents. These plant based metabolites can be used as natural antibiotics against pathogenic bacteria. Synthetic antibiotics caused different side effects and become resistant to bacteria. Therefore the main objective of the present study was to investigate the inhibitory potential of nine Mentha species extracts against pathogenic bacteria. The methanolic leaves extracts of nine Mentha species (Mentha arvensis, Mentha longifolia, Mentha officinalis, Mentha piperita, Mentha citrata, Mentha pulegium, Mentha royleana, Mentha spicata and Mentha suareolens) were compared for antimicrobial activities. These Mentha species showed strong antibacterial activity against four microorganisms tested. Mentha arvensis showed 25 mm and 30 mm zones of inhibition against Staphylococcus aureus, Vibrio cholera and Enterobacter aerogens. Moreover, Mentha longifolia showed 24 mm zone of inhibition against Staphylococcus aureus. Mentha officinalis showed 30 mm zone of inhibition against Staphylococcus aureus. 25 mm inhibitory zone was recorded against Staphylococcus aureus by Mentha piperita. Mentha royleana showed 25 mm zone of inhibition against Vibrio cholera, while Mentha spicata showed 21 mm, 22 mm and 23 mm zones of inhibition against Staphylococcus aureus, Vibrio cholera and Enterobacter aerogens. Moreover most of the Mentha species showed zone of inhibition in the range of 10-20 mm. (author)

  11. Methodology to evaluate the insecticide potential of forest tree species

    International Nuclear Information System (INIS)

    Morales Soto, Leon; Garcia P, Carlos Mario

    2000-01-01

    The flora diversity of Colombia has an enormous potential in the rational use of its forest resources. Trees with biocidal effects to control pests and diseases need to be investigated. The objective of this research was to develop a methodology with low costs, easy application and quick results. The methodology employed was as follows: selection of tree species based on bibliography, ancestral reports and personal observations. The process was as follows: field collection of plants, preparation of plants extracts and test with Artemia salina Leach to detect biological activity of the extracts using LC50. Bioassays with those extract more promising (LC50 less than 1000 ppm) Determination of active compounds. The methodology was employed with 5 forest tree species: guarea guidonia (L) Sleumer and trichia hirta L. (Meliaceae), Machaerium Moritzianum Benth. (Fabaceae), Swinglea glutinosa Merrill (rutaceae) and Mammea americana L. (Clusiaceae). Using Artemia salina Leach as indicator of biocidal potential, two species were selected as the most promising, those were: Swinglea glutinosa Merril and Machaerium moritzianum Benth. In addition bioassays were made to evaluate fagoinhibition on Atta cephalotes (L.) (Hym: Formicidae) and control of Alconeura. This methodology is recommended for this kind of research

  12. Methodology for the insecticide potential evaluation of forest species

    International Nuclear Information System (INIS)

    Morales Soto, Leon; Garcia P, Carlos Mario

    2000-01-01

    The flora diversity of Colombia has an enormous potential in the rational use of its forest resources. Trees with biocides effects to pest control and diseases need to be investigated. The objective of this research was to develop a methodology with low costs, easy application and quick results. The methodology employed was as follows: selection of tree species based on bibliography, ancestral reports and personal observations. The process was as follows: field collection of plants, preparation of plants extracts, and test with Artemia Salina, leach to detect biological activity of the extracts using LC50. Bioassays with those extract more promising (LC50 less than 1000 ppm). The methodology was employed with 5 forest tree species: Guarea guidonia (L.) Sleumer and Trichia hirta L. (Meliaceae), machaerium moritzianum Benth. (Fabaceae), Swinglea glutinosa Merrill. (Rutaceae) and Mammea americana L. (Clusiaceae). Using Artemia salina Leach as indicator of biocidal potential, two species were selected as the most promising, those were: Swinglea glutinosa Merril and Machaerium moritzianum Benth. In addition bioassays were made to evaluate fagoinhibition on Atta cephalotes (L.) and control of Alconeura. This methodology is recommended for this kind of research

  13. Evaluation of re-criticality potential in Fukushima Dai-ichi reactors following core damage accidents

    Energy Technology Data Exchange (ETDEWEB)

    NONE

    2013-08-15

    The re-criticality potential of the debris-bed, formed of the degraded core materials, cannot be ruled out during the cooling-down procedure of the Fukushima Dai-ichi NPPs. In this study the re-criticality potential has systematically investigated based on the core disruption phase analysis using a IMPACT-SAMPSON code prepared by The Institute of Applied Energy (IAE). The results obtained for the re-criticality potential, characterized by the eigen-values k-eff dependent on the debris composition formed at the core, RPV bottom, and PCV pedestal, are reflected to the arguments on the re-criticality prevention measures, such as timing and concentration of boron-compounds, during the cooling-down process of the Fukushima Dai-ichi NPPs. (author)

  14. Precursors to potential severe core damage accidents. A status report, 1982--1983

    Energy Technology Data Exchange (ETDEWEB)

    Forester, J.A.; Mitchell, D.B.; Whitehead, D.W. [and others

    1997-04-01

    This study is a continuation of earlier work that evaluated 1969-1981 and 1984-1994 events affecting commercial light-water reactors. One-hundred nine operational events that affected 51 reactors during 1982 and 1983 and that are considered to be precursors to potential severe core damage are described. All these events had conditional probabilities of subsequent severe core damage greater than or equal to 1.0 x 10{sup {minus}6}. These events were identified by first computer screening the 1982-83 licensee event reports from commercial light-water reactors to select events that could be precursors to core damage. Candidates underwent engineering evaluation that identified, analyzed, and documented the precursors. This report discusses the general rationale for the study, the selection and documentation of events as precursors, and the estimation of conditional probabilities of subsequent severe core damage for the events.

  15. Precursors to potential severe core damage accidents. A status report, 1982--1983

    International Nuclear Information System (INIS)

    Forester, J.A.; Mitchell, D.B.; Whitehead, D.W.

    1997-04-01

    This study is a continuation of earlier work that evaluated 1969-1981 and 1984-1994 events affecting commercial light-water reactors. One-hundred nine operational events that affected 51 reactors during 1982 and 1983 and that are considered to be precursors to potential severe core damage are described. All these events had conditional probabilities of subsequent severe core damage greater than or equal to 1.0 x 10 -6 . These events were identified by first computer screening the 1982-83 licensee event reports from commercial light-water reactors to select events that could be precursors to core damage. Candidates underwent engineering evaluation that identified, analyzed, and documented the precursors. This report discusses the general rationale for the study, the selection and documentation of events as precursors, and the estimation of conditional probabilities of subsequent severe core damage for the events

  16. Doubling potential of fibroblasts from different species after ionising radiation

    International Nuclear Information System (INIS)

    Macieira-Coelho, A.; Diatloff, C.; Malaise, E.

    1976-01-01

    It is stated that whereas chicken fibroblasts invariably die after a certain number of doublings in vitro, and this fact is never altered by chemical or physical agents, mouse fibroblasts invariably acquire spontaneously an infinite growth potential. In the human species fibroblasts never acquire spontaneously the capacity to divide for ever, although they can become permanent cell lines after treatment with certain viruses. This behaviour of fibroblasts in vitro has been attributed to different nutritional requirements. Experiments are described with human and mouse fibroblasts in which it was found that the response to ionising radiation matches the relative tendencies of the fibroblasts to yield permanent cell lines. Irradiation was commenced during the phase of active proliferation. Human fibroblast cultures irradiated with 100 R stopped dividing earlier than the controls, whereas cultures irradiated with 200, 300 and 500 R had the same lifespan as the control cultures. Cultures irradiated with 400 R showed the longest survival. With mouse fibroblasts the growth curves of the irradiated cells were of the same type as in the controls, but recovery occurred earlier. The results indicated that ionising radiation accelerates a natural phenomenon; in cells with a limited growth potential (chicken) it shortens the lifespan, whereas in cells that can acquire an unlimited growth potential (mouse) it accelerates acquisition of this potential; human fibroblasts showed an intermediate response, since ionising radiation neither established the cultures as with mouse cells nor reduced the number of cells produced as with chicken fibroblasts. Possible explanations for the different behaviour of the species are offered. (U.K.)

  17. Piezoelectric constants for ZnO calculated using classical polarizable core-shell potentials

    International Nuclear Information System (INIS)

    Dai Shuangxing; Dunn, Martin L; Park, Harold S

    2010-01-01

    We demonstrate the feasibility of using classical atomistic simulations, i.e. molecular dynamics and molecular statics, to study the piezoelectric properties of ZnO using core-shell interatomic potentials. We accomplish this by reporting the piezoelectric constants for ZnO as calculated using two different classical interatomic core-shell potentials: that originally proposed by Binks and Grimes (1994 Solid State Commun. 89 921-4), and that proposed by Nyberg et al (1996 J. Phys. Chem. 100 9054-63). We demonstrate that the classical core-shell potentials are able to qualitatively reproduce the piezoelectric constants as compared to benchmark ab initio calculations. We further demonstrate that while the presence of the shell is required to capture the electron polarization effects that control the clamped ion part of the piezoelectric constant, the major shortcoming of the classical potentials is a significant underprediction of the clamped ion term as compared to previous ab initio results. However, the present results suggest that overall, these classical core-shell potentials are sufficiently accurate to be utilized for large scale atomistic simulations of the piezoelectric response of ZnO nanostructures.

  18. Architecture and Distribution of Introns in Core Genes of Four Fusarium Species

    Directory of Open Access Journals (Sweden)

    Mmatshepho M. Phasha

    2017-11-01

    Full Text Available Removal of introns from transcribed RNA represents a crucial step during the production of mRNA in eukaryotes. Available whole-genome sequences and expressed sequence tags (ESTs have increased our knowledge of this process and revealed various commonalities among eukaryotes. However, certain aspects of intron structure and diversity are taxon-specific, which can complicate the accuracy of in silico gene prediction methods. Using core genes, we evaluated the distribution and architecture of Fusarium circinatum spliceosomal introns, and linked these characteristics to the accuracy of the predicted gene models of the genome of this fungus. We also evaluated intron distribution and architecture in F. verticillioides, F. oxysporum, and F. graminearum, and made comparisons with F. circinatum. Results indicated that F. circinatum and the three other Fusarium species have canonical 5′ and 3′ splice sites, but with subtle differences that are apparently not shared with those of other fungal genera. The polypyrimidine tract of Fusarium introns was also found to be highly divergent among species and genes. Furthermore, the conserved adenosine nucleoside required during the first step of splicing is contained within unique branch site motifs in certain Fusarium introns. Data generated here show that introns of F. circinatum, as well as F. verticillioides, F. oxysporum, and F. graminearum, are characterized by a number of unique features such as the CTHAH and ACCAT motifs of the branch site. Incorporation of such information into genome annotation software will undoubtedly improve the accuracy of gene prediction methods used for Fusarium species and related fungi.

  19. Extensive horizontal transfer of core genome genes between two Lactobacillus species found in the gastrointestinal tract

    Directory of Open Access Journals (Sweden)

    Maguin Emmanuelle

    2007-08-01

    Full Text Available Abstract Background While genes that are conserved between related bacterial species are usually thought to have evolved along with the species, phylogenetic trees reconstructed for individual genes may contradict this picture and indicate horizontal gene transfer. Individual trees are often not resolved with high confidence, however, and in that case alternative trees are generally not considered as contradicting the species tree, although not confirming it either. Here we conduct an in-depth analysis of 401 protein phylogenetic trees inferred with varying levels of confidence for three lactobacilli from the acidophilus complex. At present the relationship between these bacteria, isolated from environments as diverse as the gastrointestinal tract (Lactobacillus acidophilus and Lactobacillus johnsonii and yogurt (Lactobacillus delbrueckii ssp. bulgaricus, is ambiguous due to contradictory phenotypical and 16S rRNA based classifications. Results Among the 401 phylogenetic trees, those that could be reconstructed with high confidence support the 16S-rRNA tree or one alternative topology in an astonishing 3:2 ratio, while the third possible topology is practically absent. Lowering the confidence threshold for trees to be taken into consideration does not significantly affect this ratio, and therefore suggests that gene transfer may have affected as much as 40% of the core genome genes. Gene function bias suggests that the 16S rRNA phylogeny of the acidophilus complex, which indicates that L. acidophilus and L. delbrueckii ssp. bulgaricus are the closest related of these three species, is correct. A novel approach of comparison of interspecies protein divergence data employed in this study allowed to determine that gene transfer most likely took place between the lineages of the two species found in the gastrointestinal tract. Conclusion This case-study reports an unprecedented level of phylogenetic incongruence, presumably resulting from extensive

  20. Local vs. Non-local core potentials in electron scattering from sodium atoms

    International Nuclear Information System (INIS)

    Bartschat, K.; Bray, I.

    1996-02-01

    We have tested the use of a local potential instead of the non-local Hartree-Fock potential to represent exchange effects between the valence or the projectile electron and the core in electron scattering from sodium atoms For some of the most detailed observables in this collision system/ the results of the two approaches are nearly identical, even though the effect of the exchange part is shown to be particularly large. (authors). 16 refs., 4 figs

  1. Local versus non-local core potentials in electron scattering from sodium atoms

    International Nuclear Information System (INIS)

    Bartschat, K.; Bray, I.

    1996-01-01

    We have tested the use of a local potential instead of the non-local Hartree-Fock potential to represent exchange effects between the valence or the projectile electron and the core in electron scattering from sodium atoms. For some of the most detailed observables in this collision system, the results of the two approaches are nearly identical, even though the effect of the exchange part is shown to be particularly large. (Author)

  2. Ab initio effective core potentials for molecular calculations. Potentials for the transition metal atoms Sc to Hg

    International Nuclear Information System (INIS)

    Hay, P.J.; Wadt, W.R.

    1985-01-01

    Ab initio effective core potentials (ECP's) have been generated to replace the Coulomb, exchange, and core-orthogonality effects of the chemically inert core electron in the transition metal atoms Sc to Hg. For the second and third transition series relative ECP's have been generated which also incorporate the mass--velocity and Darwin relativistic effects into the potential. The ab initio ECP's should facilitate valence electron calculations on molecules containing transition-metal atoms with accuracies approaching all-electron calculations at a fraction of the computational cost. Analytic fits to the potentials are presented for use in multicenter integral evaluation. Gaussian orbital valence basis sets are developed for the (3d,4s,4p), (4d,5s,5p), and (5d,6s,6p) orbitals of the first, second, and third transition series atoms, respectively. All-electron and valence-electron atomic excitation energies are also compared for the low-lying states of Sc--Hg, and the valence-electron calculations are found to reproduce the all-electron excitation energies (typically within a few tenths of an eV)

  3. Evolution of C-O-H-N volatile species in the magma ocean during core formation.

    Science.gov (United States)

    Dalou, C.; Le Losq, C.; Hirschmann, M. M.; Jacobsen, S. D.; Fueri, E.

    2017-12-01

    The composition of the Hadean atmosphere affected how life began on Earth. Magma ocean degassing of C, O, H, and N was a key influence on the composition of the Hadean atmosphere. To identify the nature of degassed C-O-H-N species, we determined their speciation in reduced basaltic glasses (in equilibrium with Fe-C-N metal alloy, synthetized at 1400 and 1600 ºC and 1.2-3 GPa) via Raman spectroscopy. We addressed the effect of oxygen fugacity (fO2) on C-O-H-N speciation between IW-2.3 and IW-0.4, representing the evolution of the shallow upper mantle fO2 during the Hadean. We observe H2, NH2, NH3, CH3, CH4, CO, N2, and OH species in all glasses. With increasing ƒO2, our results support the formation of OH groups at the expense of N-H and C-H bonds in the melt, implying the equilibria at IW-2: (1) 2OH- (melt) + ½ N2 (melt) ↔ NH2 (melt) + 2 O2- (melt) , (2) 2OH- (melt) + ½ N2 (melt) + ½ H2 (melt) ↔ NH3 (melt) + 2 O2- (melt) . With increasing fO2, eqs. (1) and (2) shift to the left. From IW-2 to IW, we also observe an increase in the intensity of the NH2 peak relative to NH3. Carbon is present as CH3, CH4, and CO in all our glasses. While CO is likely the main carbon specie under reduced conditions (e.g., Armstrong et al. 2015), CH species should remain stable from moderately (IW-0.4) to very reduced (IW-3; Ardia et al. 2014; Kadik et al. 2015, 2017) conditions in hydrous silicate glasses following the equilibria: (3) 3OH- (melt) + C (graphite) ↔ CH3 (melt) + 3O2- (melt) , (4) 4OH- (melt) + C (graphite) ↔ CH4 (melt) + 4O2- (melt) . With increasing fO2, eqs. (3) and (4) shift to the left. As metal segregation and core formation drove the ƒO2 of the magma ocean from IW-4 to IW during the Hadean (Rubie et al. 2011), the nature of species degassed by the magma ocean should have evolved during that time. The C-O-H-N species we observe dissolved in our reduced glasses may not directly correspond to those degassed (Schaeffer and Fegley, 2007), but a better

  4. Embedding potentials for excited states of embedded species

    International Nuclear Information System (INIS)

    Wesolowski, Tomasz A.

    2014-01-01

    Frozen-Density-Embedding Theory (FDET) is a formalism to obtain the upper bound of the ground-state energy of the total system and the corresponding embedded wavefunction by means of Euler-Lagrange equations [T. A. Wesolowski, Phys. Rev. A 77(1), 012504 (2008)]. FDET provides the expression for the embedding potential as a functional of the electron density of the embedded species, electron density of the environment, and the field generated by other charges in the environment. Under certain conditions, FDET leads to the exact ground-state energy and density of the whole system. Following Perdew-Levy theorem on stationary states of the ground-state energy functional, the other-than-ground-state stationary states of the FDET energy functional correspond to excited states. In the present work, we analyze such use of other-than-ground-state embedded wavefunctions obtained in practical calculations, i.e., when the FDET embedding potential is approximated. Three computational approaches based on FDET, that assure self-consistent excitation energy and embedded wavefunction dealing with the issue of orthogonality of embedded wavefunctions for different states in a different manner, are proposed and discussed

  5. Tissue distribution, core biosynthesis and diversification of pyrrolizidine alkaloids of the lycopsamine type in three Boraginaceae species.

    Science.gov (United States)

    Frölich, Cordula; Ober, Dietrich; Hartmann, Thomas

    2007-04-01

    Three species of the Boraginaceae were studied: greenhouse-grown plants of Heliotropium indicum and Agrobacterium rhizogenes transformed roots cultures (hairy roots) of Cynoglossum officinale and Symphytum officinale. The species-specific pyrrolizidine alkaloid (PA) profiles of the three systems were established by GC-MS. All PAs are genuinely present as N-oxides. In H. indicum the tissue-specific PA distribution revealed the presence of PAs in all tissues with the highest levels in the inflorescences which in a flowering plant may account for more than 70% of total plant alkaloid. The sites of PA biosynthesis vary among species. In H. indicum PAs are synthesized in the shoot but not roots whereas they are only made in shoots for C. officinale and in roots of S. officinale. Classical tracer studies with radioactively labelled precursor amines (e.g., putrescine, spermidine and homospermidine) and various necine bases (trachelanthamidine, supinidine, retronecine, heliotridine) and potential ester alkaloid intermediates (e.g., trachelanthamine, supinine) were performed to evaluate the biosynthetic sequences. It was relevant to perform these comparative studies since the key enzyme of the core pathway, homospermidine synthase, evolved independently in the Boraginaceae and, for instance, in the Asteraceae [Reimann, A., Nurhayati, N., Backenkohler, A., Ober, D., 2004. Repeated evolution of the pyrrolizidine alkaloid-mediated defense system in separate angiosperm lineages. Plant Cell 16, 2772-2784.]. These studies showed that the core pathway for the formation of trachelanthamidine from putrescine and spermidine via homospermidine is common to the pathway in Senecio ssp. (Asteraceae). In both pathways homospermidine is further processed by a beta-hydroxyethylhydrazine sensitive diamine oxidase. Further steps of PA biosynthesis starting with trachelanthamidine as common precursor occur in two successive stages. Firstly, the necine bases are structurally modified and either

  6. Waterlike anomalies in a two-dimensional core-softened potential

    Science.gov (United States)

    Bordin, José Rafael; Barbosa, Marcia C.

    2018-02-01

    We investigate the structural, thermodynamic, and dynamic behavior of a two-dimensional (2D) core-corona system using Langevin dynamics simulations. The particles are modeled by employing a core-softened potential which exhibits waterlike anomalies in three dimensions. In previous studies in a quasi-2D system a new region in the pressure versus temperature phase diagram of structural anomalies was observed. Here we show that for the two-dimensional case two regions in the pressure versus temperature phase diagram with structural, density, and diffusion anomalies are observed. Our findings indicate that, while the anomalous region at lower densities is due the competition between the two length scales in the potential at higher densities, the anomalous region is related to the reentrance of the melting line.

  7. INTERFEROMETRIC OBSERVATIONS OF NITROGEN-BEARING MOLECULAR SPECIES IN THE STAR-FORMING CORE AHEAD OF HH 80N

    Energy Technology Data Exchange (ETDEWEB)

    Masqué, Josep M.; Estalella, Robert [Departament d' Astronomia i Meteorologia, Universitat de Barcelona, Martí i Franquès 1, E-08028 Barcelona, Catalunya (Spain); Girart, Josep M. [Institut de Ciències de l' Espai (CSIC-IEEC), Campus UAB, Facultat de Ciències, Torre C5 - parell 2, E-08193 Bellaterra, Catalunya (Spain); Anglada, Guillem; Osorio, Mayra [Instituto de Astrofísica de Andalucía, CSIC, Camino Bajo de Huétor 50, E-18008 Granada (Spain); Beltrán, Maria T. [INAF-Osservatorio Astrofisico di Arcetri, Largo E. Fermi 5, I-50125 Firenze (Italy)

    2013-10-10

    We present Very Large Array NH{sub 3} and Plateau de Bure Interferometer NH{sub 2}D and HN{sup 13}C observations of the star-forming core ahead of HH 80N, the optically obscured northern counterpart of the Herbig-Haro objects HH 80/81. The main goal is to determine the kinematical information of the high density regions of the core (n ∼> 10{sup 5} cm{sup –3}) missed in previous works due to the depletion of the species observed (e.g., CS). The obtained maps show different kinematical signatures between the eastern and western parts of the core, suggesting a possible dynamical interaction of the core with the HH 80/81/80N outflow. The analysis of the position-velocity (P-V) plots of these species rules out a previous interpretation of having a molecular ring-like structure with a radius of 6 × 10{sup 4} AU traced by CS infalling onto a central protostar found in the core (IRS1). A high degree of NH{sub 3} deuteration, with respect to the central part of the core harboring IRS1, is derived in the eastern part, where a dust condensation (SE) is located. This deuteration trend of NH{sub 3} suggests that SE is in a pre-stellar evolutionary stage, earlier than that of IRS1. Since SE is the closest condensation to the HH 80N/81/80N outflow, in a case of outflow-core dynamical interaction, it should be perturbed first and be the most evolved condensation in the core. Therefore, the derived evolutionary sequence for SE and IRS1 makes outflow triggered star formation on IRS1 unlikely.

  8. Automated classification of Acid Rock Drainage potential from Corescan drill core imagery

    Science.gov (United States)

    Cracknell, M. J.; Jackson, L.; Parbhakar-Fox, A.; Savinova, K.

    2017-12-01

    Classification of the acid forming potential of waste rock is important for managing environmental hazards associated with mining operations. Current methods for the classification of acid rock drainage (ARD) potential usually involve labour intensive and subjective assessment of drill core and/or hand specimens. Manual methods are subject to operator bias, human error and the amount of material that can be assessed within a given time frame is limited. The automated classification of ARD potential documented here is based on the ARD Index developed by Parbhakar-Fox et al. (2011). This ARD Index involves the combination of five indicators: A - sulphide content; B - sulphide alteration; C - sulphide morphology; D - primary neutraliser content; and E - sulphide mineral association. Several components of the ARD Index require accurate identification of sulphide minerals. This is achieved by classifying Corescan Red-Green-Blue true colour images into the presence or absence of sulphide minerals using supervised classification. Subsequently, sulphide classification images are processed and combined with Corescan SWIR-based mineral classifications to obtain information on sulphide content, indices representing sulphide textures (disseminated versus massive and degree of veining), and spatially associated minerals. This information is combined to calculate ARD Index indicator values that feed into the classification of ARD potential. Automated ARD potential classifications of drill core samples associated with a porphyry Cu-Au deposit are compared to manually derived classifications and those obtained by standard static geochemical testing and X-ray diffractometry analyses. Results indicate a high degree of similarity between automated and manual ARD potential classifications. Major differences between approaches are observed in sulphide and neutraliser mineral percentages, likely due to the subjective nature of manual estimates of mineral content. The automated approach

  9. Phytoremediation potential of some halophytic species for soil salinity.

    Science.gov (United States)

    Devi, S; Nandwal, A S; Angrish, R; Arya, S S; Kumar, N; Sharma, S K

    2016-01-01

    Phytoremediation potential of six halophytic species i.e. Suaeda nudiflora, Suaeda fruticosa, Portulaca oleracea, Atriplex lentiformis, Parkinsonia aculeata and Xanthium strumarium was assessed under screen house conditions. Plants were raised at 8.0, 12.0, 16.0, and 20.0 dSm(-1) of chloride-dominated salinity. The control plants were irrigated with canal water. Sampling was done at vegetative stage (60-75 DAS). About 95 percent seed germination occurred up to 12 dSm(-1) and thereafter declined slightly. Mean plant height and dry weight plant(-1) were significantly decreased from 48.71 to 32.44 cm and from 1.73 to 0.61g plant(-1) respectively upon salinization. Na(+)/K(+) ratio (0.87 to 2.72), Na(+)/ Ca(2+) + Mg(2+) (0.48 to 1.54) and Cl(-)/SO4(2-) (0.94 to 5.04) ratio showed increasing trend. Salinity susceptibility index was found minimum in Suaeda fruticosa (0.72) and maximum in Parkinsonia aculeata (1.17). Total ionic content also declined and magnitude of decline varied from 8.51 to 18.91% at 8 dSm(-1) and 1.85 to 7.12% at 20 dSm(-1) of salinity. On the basis of phytoremediation potential Suaeda fruticosa (1170.02 mg plant(-1)), Atriplex lentiformis (777.87 mg plant(-1)) were the best salt hyperaccumulator plants whereas Xanthium strumarium (349.61 mg plant(-1)) and Parkinsonia aculeata (310.59 mg plant(-1)) were the least hyperaccumulator plants.

  10. Potential fields & satellite missions: what they tell us about the Earth's core?

    Science.gov (United States)

    Mandea, M.; Panet, I.; Lesur, V.; de Viron, O.; Diament, M.; Le Mouël, J.

    2012-12-01

    Since the advent of satellite potential field missions, the search to find information they can carry about the Earth's core has been motivated both by an interest in understanding the structure of dynamics of the Earth's interior and by the possibility of applying new space data analysis. While it is agreed upon that the magnetic field measurements from space bring interesting information on the rapid variations of the core magnetic field and flows associated with, the question turns to whether the core process can have a signature in the space gravity data. Here, we tackle this question, in the light of the recent data from the GRACE mission, that reach an unprecedented precision. Our study is based on eight years of high-resolution, high-accuracy gravity and magnetic satellite data, provided by the GRACE and CHAMP satellite missions. From the GRACE CNES/GRGS geoid solutions, we have emphasized the long-term variability by using a specific post-processing technique. From the CHAMP magnetic data we have computed models for the core magnetic field and its temporal variations, and the flow at the top of the core. A correlation analysis between the gravity and magnetic gridded series indicates that the inter-annual changes in the core magnetic field - under a region from the Atlantic to Indian Oceans - coincide with similar changes in the gravity field. These results should be considered as a constituent when planning new Earth's observation space missions and future innovations relevant to both gravity (after GRACE Follow-On) and magnetic (after Swarm) missions.

  11. Perturbative treatment of potential walls or potential cores in quantum mechanics

    International Nuclear Information System (INIS)

    Mei, W.N.

    1987-01-01

    The general problem involving an infinite potential barrier is treated by first constructing a pseudopotential H' that is shown to reproduce the effect of the barrier. A new procedure is then developed to handle the perturbative effect of H' since the standard formulae become invalid. The case of a finite potential well with large height V/sub o/ can the be solved by reducing it to that of an equivalent infinite barrier. The perturbation parameter turns out to be proportional 1/V/sub o/-E)/sup 1/2/ where E is the energy of the unperturbed state, defying, therefore, the conventional perturbation series treatment that depends on a split-off Hamiltonian for its expansion parameter. These methods are first illustrated with simple examples and then compared to more complex cases. Recently, they have extended this method to the case of degenerate perturbation. The calculation of the hydrogen-like impurity states in quantum well is in progress. Their result should also furnish a check for any specific problem involving a barrier solved by other approximate means such as the variational method

  12. Ab initio effective core potentials including relativistic effects. II. Potential energy curves for Xe2, Xe+2, and Xe*2

    International Nuclear Information System (INIS)

    Ermler, W.C.; Lee, Y.S.; Pitzer, K.S.; Winter, N.W.

    1978-01-01

    Potential energy curves for the ground 1 Σ + /sub g/ state of Xe 2 , the first four states of the Xe + 2 ions, and the eight Xe* 2 excimer states corresponding to the addition of a 6ssigma/sub g/ Rydberg electron to these ion cores have been computed using averaged relativistic effective core potentials (AREP) and the self-consistent field approximation for the valence electrons. The calculations were carried out using the LS-coupling scheme with the effects of spin--orbit coupling included in the resulting potential energy curves using an empirical procedure. A comparison of nonrelativistic and averaged relativistic EP's and subsequent molecular calculations indicates that relativistic effects arising from the mass--velocity and Darwin terms are not important for these properties of Xe 2 molecules. Spectroscopic constants for Xe + 2 are in good agreement with all electron CI calculations suggesting that the computed values for Xe* 2 excimers should be reliable. The lifetime for the O/sub u/ + state of the Xe 2 * is computed to be 5.6 nsec which is in the range of the experimentally determined values

  13. Transport coefficients in neutron star cores in BHF approach. Comparison of different nucleon potentials

    Science.gov (United States)

    Shternin, P. S.; Baldo, M.; Schulze, H.-J.

    2017-12-01

    Thermal conductivity and shear viscosity of npeµ matter in non-superfluid neutron star cores are considered in the framework of Brueckner-Hartree-Fock many-body theory. We extend our previous work (Shternin et al 2013 PRC 88 065803) by analysing different nucleon-nucleon potentials and different three-body forces. We find that the use of different potentials leads up to one order of magnitude variations in the values of the nucleon contribution to transport coefficients. The nucleon contribution dominates the thermal conductivity, but for all considered models the shear viscosity is dominated by leptons.

  14. Five potential consequences of climate change for invasive species.

    Science.gov (United States)

    Hellmann, Jessica J; Byers, James E; Bierwagen, Britta G; Dukes, Jeffrey S

    2008-06-01

    Scientific and societal unknowns make it difficult to predict how global environmental changes such as climate change and biological invasions will affect ecological systems. In the long term, these changes may have interacting effects and compound the uncertainty associated with each individual driver. Nonetheless, invasive species are likely to respond in ways that should be qualitatively predictable, and some of these responses will be distinct from those of native counterparts. We used the stages of invasion known as the "invasion pathway" to identify 5 nonexclusive consequences of climate change for invasive species: (1) altered transport and introduction mechanisms, (2) establishment of new invasive species, (3) altered impact of existing invasive species, (4) altered distribution of existing invasive species, and (5) altered effectiveness of control strategies. We then used these consequences to identify testable hypotheses about the responses of invasive species to climate change and provide suggestions for invasive-species management plans. The 5 consequences also emphasize the need for enhanced environmental monitoring and expanded coordination among entities involved in invasive-species management.

  15. Precursors to potential severe core damage accidents: 1995 A status report

    International Nuclear Information System (INIS)

    Belles, R.J.; Cletcher, J.W.; Copinger, D.A.

    1997-04-01

    Ten operational events that affected 10 commercial light-water reactors during 1995 and that are considered to be precursors to potential severe core damage are described. All these events had conditional probabilities of subsequent severe core damage greater than or equal to 1.0 x 10 -6 . These events were identified by first computer-screening the 1995 licensee event reports from commercial light-water reactors to identify those events that could potentially be precursors. Candidate precursors were selected and evaluated in a process similar to that used in previous assessments. Selected events underwent engineering evaluation that identified, analyzed, and documented the precursors. Other events designated by the Nuclear Regulatory Commission (NRC) also underwent a similar evaluation. Finally, documented precursors were submitted for review by licensees and NRC headquarters and regional offices to ensure the plant design and its response to the precursor were correctly characterized. This study is a continuation of earlier work, which evaluated 1969-1981 and 1984-1994 events. The report discusses the general rationale for this study, the selection and documentation of events as precursors, and the estimation of conditional probabilities of subsequent severe core damage for the events

  16. Precursors to potential severe core damage accidents: 1996. A status report. Volume 25

    International Nuclear Information System (INIS)

    Belles, R.J.; Cletcher, J.W.; Copinger, D.A.; Muhlheim, M.D.; Dolan, B.W.; Minarick, J.W.

    1997-12-01

    This report describes the 14 operational events in 1996 that affected 13 commercial light-water reactors and that are considered to be precursors to potential severe core damage accidents. All these events had conditional probabilities of subsequent severe core damage greater than or equal to 1.0 x 10 -6 . These events were identified by first computer-screening the 1996 licensee event reports from commercial light-water reactors to identify those events that could potentially be precursors. Candidate precursors were selected and evaluated in a process similar to that used in previous assessments. Selected events underwent engineering evaluation that identified, analyzed, and documented the precursors. Other events designated by the Nuclear Regulatory Commission (NRC) also underwent a similar evaluation. Finally, documented precursors were submitted for review by licensees and NRC headquarters and regional offices to ensure the plant design and its response to the precursor were correctly characterized. This study is a continuation of earlier work, which evaluated 1969--1995 events. The report discusses the general rationale for this study, the selection and documentation of events as precursors, and the estimation of conditional probabilities of subsequent severe core damage for the events

  17. Precursors to potential severe core damage accidents: 1994, a status report. Volume 22: Appendix I

    International Nuclear Information System (INIS)

    Belles, R.J.; Cletcher, J.W.; Copinger, D.A.; Vanden Heuvel, L.N.; Dolan, B.W.; Minarick, J.W.

    1995-12-01

    Nine operational events that affected eleven commercial light-water reactors (LWRs) during 1994 and that are considered to be precursors to potential severe core damage are described. All these events had conditional probabilities of subsequent severe core damage greater than or equal to 1.0 x 10 -6 . These events were identified by computer-screening the 1994 licensee event reports from commercial LWRs to identify those that could be potential precursors. Candidate precursors were then selected and evaluated in a process similar to that used in previous assessments. Selected events underwent engineering evaluation that identified, analyzed, and documented the precursors. Other events designated by the Nuclear Regulatory Commission (NRC) also underwent a similar evaluation. Finally, documented precursors were submitted for review by licensees and NRC headquarters and regional offices to ensure that the plant design and its response to the precursor were correctly characterized. This study is a continuation of earlier work, which evaluated 1969--1981 and 1984--1993 events. The report discusses the general rationale for this study, the selection and documentation of events as precursors, and the estimation of conditional probabilities of subsequent severe core damage for events. This document is bound in two volumes: Vol. 21 contains the main report and Appendices A--H; Vol. 22 contains Appendix 1

  18. Precursors to potential severe core damage accidents: 1995 A status report

    Energy Technology Data Exchange (ETDEWEB)

    Belles, R.J.; Cletcher, J.W.; Copinger, D.A. [and others

    1997-04-01

    Ten operational events that affected 10 commercial light-water reactors during 1995 and that are considered to be precursors to potential severe core damage are described. All these events had conditional probabilities of subsequent severe core damage greater than or equal to 1.0 x 10{sup {minus}6}. These events were identified by first computer-screening the 1995 licensee event reports from commercial light-water reactors to identify those events that could potentially be precursors. Candidate precursors were selected and evaluated in a process similar to that used in previous assessments. Selected events underwent engineering evaluation that identified, analyzed, and documented the precursors. Other events designated by the Nuclear Regulatory Commission (NRC) also underwent a similar evaluation. Finally, documented precursors were submitted for review by licensees and NRC headquarters and regional offices to ensure the plant design and its response to the precursor were correctly characterized. This study is a continuation of earlier work, which evaluated 1969-1981 and 1984-1994 events. The report discusses the general rationale for this study, the selection and documentation of events as precursors, and the estimation of conditional probabilities of subsequent severe core damage for the events.

  19. Precursors to potential severe core damage accidents: 1994, a status report. Volume 22: Appendix I

    Energy Technology Data Exchange (ETDEWEB)

    Belles, R.J.; Cletcher, J.W.; Copinger, D.A.; Vanden Heuvel, L.N. [Oak Ridge National Lab., TN (United States); Dolan, B.W.; Minarick, J.W. [Oak Ridge National Lab., TN (United States)]|[Science Applications International Corp., Oak Ridge, TN (United States)

    1995-12-01

    Nine operational events that affected eleven commercial light-water reactors (LWRs) during 1994 and that are considered to be precursors to potential severe core damage are described. All these events had conditional probabilities of subsequent severe core damage greater than or equal to 1.0 {times} 10{sup {minus}6}. These events were identified by computer-screening the 1994 licensee event reports from commercial LWRs to identify those that could be potential precursors. Candidate precursors were then selected and evaluated in a process similar to that used in previous assessments. Selected events underwent engineering evaluation that identified, analyzed, and documented the precursors. Other events designated by the Nuclear Regulatory Commission (NRC) also underwent a similar evaluation. Finally, documented precursors were submitted for review by licensees and NRC headquarters and regional offices to ensure that the plant design and its response to the precursor were correctly characterized. This study is a continuation of earlier work, which evaluated 1969--1981 and 1984--1993 events. The report discusses the general rationale for this study, the selection and documentation of events as precursors, and the estimation of conditional probabilities of subsequent severe core damage for events. This document is bound in two volumes: Vol. 21 contains the main report and Appendices A--H; Vol. 22 contains Appendix 1.

  20. Optimized surface-slab excited-state muffin-tin potential and surface core level shifts

    International Nuclear Information System (INIS)

    Rundgren, J.

    2003-01-01

    An optimized muffin-tin (MT) potential for surface slabs with preassigned surface core-level shifts (SCLS's) is presented. By using the MT radii as adjustable parameters the model is able to conserve the definition of the SCLS with respect to the bulk and concurrently to generate a potential that is continuous at the MT radii. The model is conceived for elastic electron scattering in a surface slab with exchange-correlation interaction described by the local density approximation. The model employs two data bases for the self-energy of the signal electron (after Hedin and Lundqvist or Sernelius). The potential model is discussed in detail with two surface structures Be(101-bar0), for which SCLS's are available, and Cu(111)p(2x2)Cs, in which the close-packed radii of the atoms are extremely different. It is considered plausible that tensor LEED based on an optimized MT potential can be used for determining SCLS's

  1. Potential Energy Surfaces and Dynamics of High Energy Species

    Science.gov (United States)

    2009-04-13

    explored include ionic liquids and a range of high-nitrogen content and nitrogen-oxygen content species. Polyhedral oligomeric silisesquioxanes are...Approved for Public Release 13. SUPPLEMENTARY NOTES 14. ABSTRACT Several papers on ionic liquids have been published or submitted as a result of this...in energetic ionic liquids . These are variously substituted triazolium, tertazolium, and pentazolium cations. The heats of formation of all species

  2. Ranking of critical species to preserve the functionality of mutualistic networks using the k-core decomposition.

    Science.gov (United States)

    García-Algarra, Javier; Pastor, Juan Manuel; Iriondo, José María; Galeano, Javier

    2017-01-01

    Network analysis has become a relevant approach to analyze cascading species extinctions resulting from perturbations on mutualistic interactions as a result of environmental change. In this context, it is essential to be able to point out key species, whose stability would prevent cascading extinctions, and the consequent loss of ecosystem function. In this study, we aim to explain how the k -core decomposition sheds light on the understanding the robustness of bipartite mutualistic networks. We defined three k -magnitudes based on the k -core decomposition: k -radius, k -degree, and k -risk. The first one, k -radius, quantifies the distance from a node to the innermost shell of the partner guild, while k -degree provides a measure of centrality in the k -shell based decomposition. k -risk is a way to measure the vulnerability of a network to the loss of a particular species. Using these magnitudes we analyzed 89 mutualistic networks involving plant pollinators or seed dispersers. Two static extinction procedures were implemented in which k -degree and k -risk were compared against other commonly used ranking indexes, as for example MusRank, explained in detail in Material and Methods. When extinctions take place in both guilds, k -risk is the best ranking index if the goal is to identify the key species to preserve the giant component. When species are removed only in the primary class and cascading extinctions are measured in the secondary class, the most effective ranking index to identify the key species to preserve the giant component is k -degree. However, MusRank index was more effective when the goal is to identify the key species to preserve the greatest species richness in the second class. The k -core decomposition offers a new topological view of the structure of mutualistic networks. The new k -radius, k -degree and k -risk magnitudes take advantage of its properties and provide new insight into the structure of mutualistic networks. The k -risk and k

  3. Ranking of critical species to preserve the functionality of mutualistic networks using the k-core decomposition

    Directory of Open Access Journals (Sweden)

    Javier García-Algarra

    2017-05-01

    Full Text Available Background Network analysis has become a relevant approach to analyze cascading species extinctions resulting from perturbations on mutualistic interactions as a result of environmental change. In this context, it is essential to be able to point out key species, whose stability would prevent cascading extinctions, and the consequent loss of ecosystem function. In this study, we aim to explain how the k-core decomposition sheds light on the understanding the robustness of bipartite mutualistic networks. Methods We defined three k-magnitudes based on the k-core decomposition: k-radius, k-degree, and k-risk. The first one, k-radius, quantifies the distance from a node to the innermost shell of the partner guild, while k-degree provides a measure of centrality in the k-shell based decomposition. k-risk is a way to measure the vulnerability of a network to the loss of a particular species. Using these magnitudes we analyzed 89 mutualistic networks involving plant pollinators or seed dispersers. Two static extinction procedures were implemented in which k-degree and k-risk were compared against other commonly used ranking indexes, as for example MusRank, explained in detail in Material and Methods. Results When extinctions take place in both guilds, k-risk is the best ranking index if the goal is to identify the key species to preserve the giant component. When species are removed only in the primary class and cascading extinctions are measured in the secondary class, the most effective ranking index to identify the key species to preserve the giant component is k-degree. However, MusRank index was more effective when the goal is to identify the key species to preserve the greatest species richness in the second class. Discussion The k-core decomposition offers a new topological view of the structure of mutualistic networks. The new k-radius, k-degree and k-risk magnitudes take advantage of its properties and provide new insight into the structure of

  4. Precursors to potential severe core damage accidents: 1997 - A status report. Volume 26

    International Nuclear Information System (INIS)

    Belles, R.J.; Cletcher, J.W.; Copinger, D.A.; Muhlheim, M.D.; Dolan, B.W.; Minarick, J.W.

    1998-11-01

    This report describes the five operational events in 1997 that affected five commercial light-water reactors (LWRs) and that are considered to be precursors to potential severe core damage accidents. All these events had conditional probabilities of subsequent severe core damage greater than or equal to 1.0 x 10 -6 . These events were identified by first computer-screening the 1997 licensee event reports from commercial LWRs to identify those events that could be precursors. Candidate precursors were selected and evaluated in a process similar to that used in previous assessments. Selected events underwent engineering evaluation that identified, analyzed, and documented the precursors. Other events designated by the Nuclear Regulatory Commission (NRC) also underwent a similar evaluation. Finally, documented precursors were submitted for review by licensees and NRC headquarters to ensure that the plant design and its response to the precursor were correctly characterized. This study is a continuation of earlier work, which evaluated 1969--1996 events. The report discusses the general rationale for this study, the selection and documentation of events as precursors, and the estimation of conditional probabilities of subsequent severe core damage for the events

  5. Molluscan indicator species and their potential use in ecological status assessment using species distribution modeling.

    Science.gov (United States)

    Moraitis, Manos L; Tsikopoulou, Irini; Geropoulos, Antonios; Dimitriou, Panagiotis D; Papageorgiou, Nafsika; Giannoulaki, Marianna; Valavanis, Vasilis D; Karakassis, Ioannis

    2018-05-24

    Marine habitat assessment using indicator species through Species Distribution Modeling (SDM) was investigated. The bivalves: Corbula gibba and Flexopecten hyalinus were the indicator species characterizing disturbed and undisturbed areas respectively in terms of chlorophyll a concentration in Greece. The habitat suitability maps of these species reflected the overall ecological status of the area. The C. gibba model successfully predicted the occurrence of this species in areas with increased physical disturbance driven by chlorophyll a concentration, whereas the habitat map for F. hyalinus showed an increased probability of occurrence in chlorophyll-poor areas, affected mainly by salinity. We advocate the use of C. gibba as a proxy for eutrophication and the incorporation of this species in monitoring studies through SDM methods. For the Mediterranean Sea we suggest the use of F. hyalinus in SDM as an indicator of environmental stability and a possible forecasting tool for salinity fluctuations. Copyright © 2018 Elsevier Ltd. All rights reserved.

  6. Multi electron species and shielding potentials in plasmas

    International Nuclear Information System (INIS)

    Khan, Arroj A.; Murtaza, G.; Rasheed, A.; Jamil, M.

    2012-01-01

    The phenomenon of Debye shielding is investigated in electron ion plasmas using the approach of two temperature electrons. We get different profiles of potential for different parameters and observe that the potentials fall very slowly than the standard Coulomb and Debye potentials. The importance of work is pointed out in the introduction.

  7. Screening of Bacillus Species with Potentials of Antibiotics Production

    OpenAIRE

    Faruk Adamu KUTA; Lohya NIMZING; Priscilla Yahemba ORKA’A

    2009-01-01

    Sixteen soil samples were collected from different refuse dump sites in Minna, the capital Niger State, and analysed for the presence of Bacillus species. Physical-chemical analysis of the soil samples revealed the followings: PH value 6.89-8.47; moisture content 1.58 – 21.21% and temperature 27-28ºC. Using both pour plate and streak method of inoculation, total bacterial count in the soil samples ranged from 3.8×104 cfu/g 16.0×104 cfu/g. The identified Bacillus species included: Bacillus cer...

  8. ANTIFUNGAL POTENTIAL OF PLANT SPECIES FROM BRAZILIAN CAATINGA AGAINST DERMATOPHYTES.

    Science.gov (United States)

    Biasi-Garbin, Renata Perugini; Demitto, Fernanda de Oliveira; Amaral, Renata Claro Ribeiro do; Ferreira, Magda Rhayanny Assunção; Soares, Luiz Alberto Lira; Svidzinski, Terezinha Inez Estivalet; Baeza, Lilian Cristiane; Yamada-Ogatta, Sueli Fumie

    2016-01-01

    Trichophyton rubrum and Trichophyton mentagrophytes complex, or Trichophyton spp. are the main etiologic agents of dermatophytosis, whose treatment is limited by the high cost of antifungal treatments, their various side effects, and the emergence of resistance amongst these species. This study evaluated the in vitro antidermatophytic activity of 23 crude extracts from nine plant species of semiarid vegetation (caatinga) found in Brazil. The extracts were tested at concentrations ranging from 1.95 to 1,000.0 mg/mL by broth microdilution assay against the reference strains T. rubrum ATCC 28189 and T. mentagrophytes ATCC 11481, and 33 clinical isolates of dermatophytes. All plants showed a fungicidal effect against both fungal species, with MIC/MFC values of the active extracts ranging from 15.6 to 250.0 µg/mL. Selected extracts of Eugenia uniflora (AcE), Libidibia ferrea (AE), and Persea americana (AcE) also exhibited a fungicidal effect against all clinical isolates of T. rubrum and T. mentagrophytes complex. This is the first report of the antifungal activity of Schinus terebinthifolius, Piptadenia colubrina, Parapiptadenia rigida, Mimosa ophthalmocentra, and Persea americana against both dermatophyte species.

  9. ANTIFUNGAL POTENTIAL OF PLANT SPECIES FROM BRAZILIAN CAATINGA AGAINST DERMATOPHYTES

    Science.gov (United States)

    BIASI-GARBIN, Renata Perugini; DEMITTO, Fernanda de Oliveira; do AMARAL, Renata Claro Ribeiro; FERREIRA, Magda Rhayanny Assunção; SOARES, Luiz Alberto Lira; SVIDZINSKI, Terezinha Inez Estivalet; BAEZA, Lilian Cristiane; YAMADA-OGATTA, Sueli Fumie

    2016-01-01

    Trichophyton rubrum and Trichophyton mentagrophytes complex, or Trichophyton spp. are the main etiologic agents of dermatophytosis, whose treatment is limited by the high cost of antifungal treatments, their various side effects, and the emergence of resistance amongst these species. This study evaluated the in vitro antidermatophytic activity of 23 crude extracts from nine plant species of semiarid vegetation (caatinga) found in Brazil. The extracts were tested at concentrations ranging from 1.95 to 1,000.0 mg/mL by broth microdilution assay against the reference strains T. rubrum ATCC 28189 and T. mentagrophytesATCC 11481, and 33 clinical isolates of dermatophytes. All plants showed a fungicidal effect against both fungal species, with MIC/MFC values of the active extracts ranging from 15.6 to 250.0 µg/mL. Selected extracts of Eugenia uniflora (AcE), Libidibia ferrea (AE), and Persea americana (AcE) also exhibited a fungicidal effect against all clinical isolates of T. rubrum and T. mentagrophytes complex. This is the first report of the antifungal activity of Schinus terebinthifolius, Piptadenia colubrina, Parapiptadenia rigida, Mimosa ophthalmocentra, and Persea americana against both dermatophyte species. PMID:27007561

  10. ANTIFUNGAL POTENTIAL OF PLANT SPECIES FROM BRAZILIAN CAATINGA AGAINST DERMATOPHYTES

    Directory of Open Access Journals (Sweden)

    Renata Perugini BIASI-GARBIN

    2016-01-01

    Full Text Available Trichophyton rubrum and Trichophyton mentagrophytes complex, or Trichophyton spp. are the main etiologic agents of dermatophytosis, whose treatment is limited by the high cost of antifungal treatments, their various side effects, and the emergence of resistance amongst these species. This study evaluated the in vitro antidermatophytic activity of 23 crude extracts from nine plant species of semiarid vegetation (caatinga found in Brazil. The extracts were tested at concentrations ranging from 1.95 to 1,000.0 mg/mL by broth microdilution assay against the reference strains T. rubrum ATCC 28189 and T. mentagrophytesATCC 11481, and 33 clinical isolates of dermatophytes. All plants showed a fungicidal effect against both fungal species, with MIC/MFC values of the active extracts ranging from 15.6 to 250.0 µg/mL. Selected extracts of Eugenia uniflora (AcE, Libidibia ferrea (AE, and Persea americana (AcE also exhibited a fungicidal effect against all clinical isolates of T. rubrum and T. mentagrophytes complex. This is the first report of the antifungal activity of Schinus terebinthifolius, Piptadenia colubrina, Parapiptadenia rigida, Mimosa ophthalmocentra, and Persea americana against both dermatophyte species.

  11. Variability of Germinative Potential among Pathogenic Species of Aspergillus

    OpenAIRE

    Araujo, Ricardo; Rodrigues, Acacio Gonçalves

    2004-01-01

    The objective of our study was to evaluate parameters influencing the germination of Aspergillus conidia. Inoculum concentration and age significantly influenced germination. Different incubation temperatures revealed significant differences among Aspergillus species. The internal human milieu provides the ideal conditions for the development of invasive disease by Aspergillus fumigatus but restricts invasion by Aspergillus flavus and Aspergillus niger.

  12. A Framework for Spatial Risk Assessments: Potential Impacts of Nonindigenous Invasive Species on Native Species

    Directory of Open Access Journals (Sweden)

    Craig R. Allen

    2006-06-01

    Full Text Available Many populations of wild animals and plants are declining and face increasing threats from habitat fragmentation and loss as well as exposure to stressors ranging from toxicants to diseases to invasive nonindigenous species. We describe and demonstrate a spatially explicit ecological risk assessment that allows for the incorporation of a broad array of information that may influence the distribution of an invasive species, toxicants, or other stressors, and the incorporation of landscape variables that may influence the spread of a species or substances. The first step in our analyses is to develop species models and quantify spatial overlap between stressor and target organisms. Risk is assessed as the product of spatial overlap and a hazard index based on target species vulnerabilities to the stressor of interest. We illustrate our methods with an example in which the stressor is the ecologically destructive nonindigenous ant, Solenopsis invicta, and the targets are two declining vertebrate species in the state of South Carolina, USA. A risk approach that focuses on landscapes and that is explicitly spatial is of particular relevance as remaining undeveloped lands become increasingly uncommon and isolated and more important in the management and recovery of species and ecological systems. Effective ecosystem management includes the control of multiple stressors, including invasive species with large impacts, understanding where those impacts may be the most severe, and implementing management strategies to reduce impacts.

  13. Remember redcedar! An overlooked species reveals its potential

    Science.gov (United States)

    Joan O' Callaghan; Leslie Brodie; Constance Harrington; Peter Gould; Warren Devine

    2012-01-01

    People have long valued mature western redcedar for its strong, lightweight wood that is rot-resistant.The species has cultural importance for Northwest tribes who use the tree’s bark and roots as well as the wood. Redcedar is very shade-tolerant and is often found in the understory and midstory of Pacific Northwest forests. It is also very adaptable and can grow on a...

  14. Lysobacter species: a potential source of novel antibiotics.

    Science.gov (United States)

    Panthee, Suresh; Hamamoto, Hiroshi; Paudel, Atmika; Sekimizu, Kazuhisa

    2016-11-01

    Infectious diseases threaten global health due to the ability of microbes to acquire resistance against clinically used antibiotics. Continuous discovery of antibiotics with a novel mode of action is thus required. Actinomycetes and fungi are currently the major sources of antibiotics, but the decreasing rate of discovery of novel antibiotics suggests that the focus should be changed to previously untapped groups of microbes. Lysobacter species have a genome size of ~6 Mb with a relatively high G + C content of 61-70 % and are characterized by their ability to produce peptides that damage the cell walls or membranes of other microbes. Genome sequence analysis revealed that each Lysobacter species has gene clusters for the production of 12-16 secondary metabolites, most of which are peptides, thus making them 'peptide production specialists'. Given that the number of antibiotics isolated is much lower than the number of gene clusters harbored, further intensive studies of Lysobacter are likely to unearth novel antibiotics with profound biomedical applications. In this review, we summarize the structural diversity, activity and biosynthesis of lysobacterial antibiotics and highlight the importance of Lysobacter species for antibiotic production.

  15. Characterisation of Alternaria species-groups associated with core rot of apples in South Africa

    DEFF Research Database (Denmark)

    Serdani, M.; Kang, J.C.; Andersen, Birgitte

    2002-01-01

    Alternaria core rot of red apple cultivars is a serious post-harvest disease in South Africa. Thirty isolates of Alternaria spp. previously isolated from apple, together with reference isolates of A. alternata and A. infectoria, were characterised and grouped according to their sporulation patter...

  16. Distinction of neurochemistry between the cores and their shells of auditory nuclei in tetrapod species.

    Science.gov (United States)

    Zeng, ShaoJu; Li, Jia; Zhang, XinWen; Zuo, MingXue

    2007-01-01

    The distribution of Met-enkephalin (ENK), substance P (SP) and serotonin (5-HT) differs between the core and shell regions of the mesencephalic and diencephalic auditory nuclei of the turtle [Belekhova et al., 2002]. These neurochemical distinctions are also found in other tetrapods (mammals, birds and amphibians). The distribution of ENK, SP and 5-HT was examined in the core and shell regions of both mesencephalic and diencephalic auditory nuclei, and in the telencephalic auditory areas of Bengalese finches (Lonchura striata) and mice (Mus musculus), as well as in corresponding auditory areas in toads (Bufo bufo). ENK, SP and 5-HT immunoreactive fibers and perikarya were largely absent from the core regions of both mesencephalic and diencephalic auditory nuclei, in comparison with the shell regions of mice and Bengalese finches. In the toad, however, this pattern was observed in the mesencephalic auditory nucleus, but not in the diencephalic auditory areas. ENK and SP immunoreactive perikarya were detected in the telencephalic auditory area of mice, whereas no ENK, SP or 5-HT immunolabeling was observed in the telencephalic auditory area (Field L) of Bengalese finches. These findings are discussed in terms of the evolution of the core-and-shell organization of auditory nuclei of tetrapods. Copyright 2007 S. Karger AG, Basel.

  17. Magnetic nanoparticles: reactive oxygen species generation and potential therapeutic applications

    Science.gov (United States)

    Mai, Trang; Hilt, J. Zach

    2017-07-01

    Magnetic nanoparticles have been demonstrated to produce reactive oxygen species (ROS), which play a major role in various cellular pathways, via Fenton and Haber-Weiss reaction. ROS act as a double-edged sword inside the body. At normal conditions, the generation of ROS is in balance with their elimination by scavenger systems, and they can promote cell proliferation as well as differentiation. However, at an increased level, they can cause damages to protein, lead to cellular apoptosis, and contribute to many diseases including cancer. Many recent studies proposed a variety of strategies to either suppress toxicity of ROS generation or exploit the elevated ROS levels for cancer therapy.

  18. Broadband high-resolution multi-species CARS in gas-filled hollow-core photonic crystal fiber.

    Science.gov (United States)

    Trabold, Barbara M; Hupfer, Robert J R; Abdolvand, Amir; St J Russell, Philip

    2017-09-01

    We report the use of coherent anti-Stokes Raman spectroscopy (CARS) in gas-filled hollow-core photonic crystal fiber (HC-PCF) for trace gas detection. The long optical path-lengths yield a 60 dB increase in the signal level compared with free-space arrangements. This enables a relatively weak supercontinuum (SC) to be used as Stokes seed, along with a ns pump pulse, paving the way for broadband (>4000  cm -1 ) single-shot CARS with an unprecedented resolution of ∼100  MHz. A kagomé-style HC-PCF provides broadband guidance, and, by operating close to the pressure-tunable zero dispersion wavelength, we can ensure simultaneous phase-matching of all gas species. We demonstrate simultaneous measurement of the concentrations of multiple trace gases in a gas sample introduced into the core of the HC-PCF.

  19. Phylogenetic Molecular Species Delimitations Unravel Potential New Species in the Pest Genus Spodoptera Guenée, 1852 (Lepidoptera, Noctuidae)

    Science.gov (United States)

    Dumas, Pascaline; Barbut, Jérôme; Le Ru, Bruno; Silvain, Jean-François; Clamens, Anne-Laure; d’Alençon, Emmanuelle; Kergoat, Gael J.

    2015-01-01

    Nowadays molecular species delimitation methods promote the identification of species boundaries within complex taxonomic groups by adopting innovative species concepts and theories (e.g. branching patterns, coalescence). As some of them can efficiently deal with large single-locus datasets, they could speed up the process of species discovery compared to more time consuming molecular methods, and benefit from the existence of large public datasets; these methods can also particularly favour scientific research and actions dealing with threatened or economically important taxa. In this study we aim to investigate and clarify the status of economically important moths species belonging to the genus Spodoptera (Lepidoptera, Noctuidae), a complex group in which previous phylogenetic analyses and integrative approaches already suggested the possible occurrence of cryptic species and taxonomic ambiguities. In this work, the effectiveness of innovative (and faster) species delimitation approaches to infer putative species boundaries has been successfully tested in Spodoptera, by processing the most comprehensive dataset (in terms of number of species and specimens) ever achieved; results are congruent and reliable, irrespective of the set of parameters and phylogenetic models applied. Our analyses confirm the existence of three potential new species clusters (for S. exigua (Hübner, 1808), S. frugiperda (J.E. Smith, 1797) and S. mauritia (Boisduval, 1833)) and support the synonymy of S. marima (Schaus, 1904) with S. ornithogalli (Guenée, 1852). They also highlight the ambiguity of the status of S. cosmiodes (Walker, 1858) and S. descoinsi Lalanne-Cassou & Silvain, 1994. This case study highlights the interest of molecular species delimitation methods as valuable tools for species discovery and to emphasize taxonomic ambiguities. PMID:25853412

  20. Phylogenetic molecular species delimitations unravel potential new species in the pest genus Spodoptera Guenée, 1852 (Lepidoptera, Noctuidae.

    Directory of Open Access Journals (Sweden)

    Pascaline Dumas

    Full Text Available Nowadays molecular species delimitation methods promote the identification of species boundaries within complex taxonomic groups by adopting innovative species concepts and theories (e.g. branching patterns, coalescence. As some of them can efficiently deal with large single-locus datasets, they could speed up the process of species discovery compared to more time consuming molecular methods, and benefit from the existence of large public datasets; these methods can also particularly favour scientific research and actions dealing with threatened or economically important taxa. In this study we aim to investigate and clarify the status of economically important moths species belonging to the genus Spodoptera (Lepidoptera, Noctuidae, a complex group in which previous phylogenetic analyses and integrative approaches already suggested the possible occurrence of cryptic species and taxonomic ambiguities. In this work, the effectiveness of innovative (and faster species delimitation approaches to infer putative species boundaries has been successfully tested in Spodoptera, by processing the most comprehensive dataset (in terms of number of species and specimens ever achieved; results are congruent and reliable, irrespective of the set of parameters and phylogenetic models applied. Our analyses confirm the existence of three potential new species clusters (for S. exigua (Hübner, 1808, S. frugiperda (J.E. Smith, 1797 and S. mauritia (Boisduval, 1833 and support the synonymy of S. marima (Schaus, 1904 with S. ornithogalli (Guenée, 1852. They also highlight the ambiguity of the status of S. cosmiodes (Walker, 1858 and S. descoinsi Lalanne-Cassou & Silvain, 1994. This case study highlights the interest of molecular species delimitation methods as valuable tools for species discovery and to emphasize taxonomic ambiguities.

  1. Fern extracts potentiate fluconazole activity and inhibit morphological changes in Candida species

    Directory of Open Access Journals (Sweden)

    Maria A. Freitas

    2017-11-01

    Conclusions: The extracts obtained from the fern species L. venustum and P. calomelanos dose not present significant antifungal activity. However, P. calomelanos potentiates the activity of fluconazole and both extracts inhibits the morphological changes in Candida species, indicating that they have potential pharmacological activity as modulators of fungal biology. Therefore, novel studies are required to characterize the interference of these extracts in the virulence and pathogenicity of Candida species as well as the potential of fern species to treat fungal infections.

  2. Pictorial identification key for species of Sarcophagidae (Diptera of potential forensic importance in southern Brazil

    Directory of Open Access Journals (Sweden)

    Karine Pinto e Vairo

    2011-09-01

    Full Text Available Pictorial identification key for species of Sarcophagidae (Diptera of potential forensic importance in southern Brazil. Species of the subfamily Sarcophaginae are important to forensic entomology due to their necrophagous habits. This contribution presents a pictorial key for the identification of 22 Sarcophaginae species in 10 genera that are commonly found in southern Brazil. Photographs of the main structures used in species identification, mainly from the male terminalia, are provided.

  3. ANTIBACTERIAL POTENTIAL OF THE CAPITULA OF EIGHT ANATOLIAN HELICHRYSUM SPECIES

    Directory of Open Access Journals (Sweden)

    Mustafa ASLAN

    2007-08-01

    Full Text Available Abstract\tSixteen extracts prepared with petroleum ether and ethanol from the capitula obtained from eight Helichrysum species including H. armenium subsp. araxinum, H. armenium subsp. armenium, H. arenarium, H. pallasii, H. stoechas subsp. barrelieri, H. sanguineum, H. plicatum subsp. plicatum and H. graveolens (Asteraceae growing in Turkey were screened for their antibacterial activity against ten different bacteria, six of which are the Gram-positive bacteria; namely Bacillus cereus, B. megaterium, Streptococcus mutans, Micrococcus luteus, Staphylococcus aureus and Listeria monocytogenes as well as four Gram-negative bacteria; Salmonella enteritis, Shigella sonnei, Pseudomonas aeruginosa, and Escherichia coli using disk diffusion method. Ampicilline, chloramphenicol, and erythromycin were employed as the reference drugs. Among the extracts screened, the ethanol extracts of H. pallasii, H. armenium subsp. armenium, H. plicatum subsp. plicatum and H. graveolens were found to be the most active ones with the wider antibacterial spectrum. The Helichrysum species screened herein also displayed remarkable inhibitory activity against the enteric-type of bacteria, S. enteritis and S. sonnei.\tÖzet\tH. armenium subsp. araxinum, H. armenium subsp. armenium, H. arenarium, H. pallasii, H. stoechas subsp. barrelieri, H. sanguineum, H. plicatum subsp. plicatum and H. graveolens (Asteraceae olmak üzere Türkiye’de yetisen 8 Helichrysum türünden petrol eteri ve etanol ile hazirlanan onalti ekstre, 6’si Gram-pozitif (Bacillus cereus, B. megaterium, Streptococcus mutans, Micrococcus luteus, Staphylococcus aureus ve Listeria monocytogenes, 4’ü Gram-negatif (Salmonella enteritis, Shigella sonnei, Pseudomonas aeruginosa ve Escherichia coli olan 10 farkli bakteriye karsi antibakteriyel aktiviteleri açisindan disk diffüzyon yöntemi kullanilarak taranmistir. Ampisilin, kloramfenikol ve eritromisin referans ilaçlar olarak kullanilmistir. Taranan

  4. Organic Redox Species in Aqueous Flow Batteries: Redox Potentials, Chemical Stability and Solubility

    OpenAIRE

    Kristina Wedege; Emil Dražević; Denes Konya; Anders Bentien

    2016-01-01

    Organic molecules are currently investigated as redox species for aqueous low-cost redox flow batteries (RFBs). The envisioned features of using organic redox species are low cost and increased flexibility with respect to tailoring redox potential and solubility from molecular engineering of side groups on the organic redox-active species. In this paper 33, mainly quinone-based, compounds are studied experimentially in terms of pH dependent redox potential, solubility and stability, combined ...

  5. Synthetic seeds of a wild passionfruit species with ornamental potential

    Directory of Open Access Journals (Sweden)

    Maurecilne Lemes Silva

    2015-12-01

    Full Text Available Passiflora cincinnata is a wild species of passion fruit with a wide geographical distribution. It has vigorous growth, climbing habit and very showy and fragrant flowers. The aim of the present investigation was to obtain synthetic seeds from encapsulated zygotic and somatic embryos of P. cincinnata, cultivated under different conditions. Precotyledonary and cotyledonary stage embryos were obtained from zygotic embryos cultivated on MS medium supplemented with 18.1 μM of 2,4-Acid-dichlorophenoxyacetic (2,4-D and 4.5 μM of Benzyladenine (BA. Zygotic embryos and somatic embryos stages were encapsulated using sodium alginate (2.5% w v-1 and CaCl2.2H2O (1 mM as complexing agent. The zygotic and somatic embryos were encapsulated in a matrix containing (I sodium alginate, (II sodium alginate + artificial endosperm and (III sodium alginate + artificial endosperm supplemented with activated charcoal (0.15% w/v. Zygotic embryos encapsulated in the matrix (I, matrix (II and matrix (III and cultivated in flasks, germinated at rates of 79%, 76% and 86% respectively. The cotyledonary somatic embryos encapsulated in the 3 different matrices showed better germination rates when cultivated on cellulose plugs, with more than 50% of embryos converted into plants. Precotyledonary somatic embryos did not germinated regardless the matrix and cultivation. When cultivating the alginate beads ex vitro, both substrate Plantmax and Florialite showed low number of germinated embryos, and the best result (12.67% were obtained using Florialite and embryos encapsulated in the matrix (I.

  6. Cellulolytic potential of thermophilic species from four fungal orders

    DEFF Research Database (Denmark)

    Busk, Peter Kamp; Lange, Lene

    2013-01-01

    and in characterization of their industrially useful enzymes. In the present study we investigated the cellulolytic potential of 16 thermophilic fungi from the three ascomycete orders Sordariales, Eurotiales and Onygenales and from the zygomycete order Mucorales thus covering all fungal orders that include thermophiles....... Thermophilic fungi are the only described eukaryotes that can grow at temperatures above 45 ºC. All 16 fungi were able to grow on crystalline cellulose but their secreted enzymes showed widely different cellulolytic activities, pH optima and thermostabilities. Interestingly, in contrast to previous reports, we......Elucidation of fungal biomass degradation is important for understanding the turnover of biological materials in nature and has important implications for industrial biomass conversion. In recent years there has been an increasing interest in elucidating the biological role of thermophilic fungi...

  7. Different timing features in brain processing of core and moral disgust pictures: an event-related potentials study.

    Directory of Open Access Journals (Sweden)

    Xiangyi Zhang

    Full Text Available Disgust, an emotion motivating withdrawal from offensive stimuli, protects us from the risk of biological pathogens and sociomoral violations. Homogeneity of its two types, namely, core and moral disgust has been under intensive debate. To examine the dynamic relationship between them, we recorded event-related potentials (ERPs for core disgust, moral disgust and neutral pictures while participants performed a modified oddball task. ERP analysis revealed that N1 and P2 amplitudes were largest for the core disgust pictures, indicating automatic processing of the core disgust-evoking pictures. N2 amplitudes were higher for pictures evoking moral disgust relative to core disgust and neutral pictures, reflecting a violation of social norms. The core disgust pictures elicited larger P3 and late positive potential (LPP amplitudes in comparison with the moral disgust pictures which, in turn, elicited larger P3 and LPP amplitudes when compared to the neutral pictures. Taken together, these findings indicated that core and moral disgust pictures elicited different neural activities at various stages of information processing, which provided supporting evidence for the heterogeneity of disgust.

  8. Different timing features in brain processing of core and moral disgust pictures: an event-related potentials study.

    Science.gov (United States)

    Zhang, Xiangyi; Guo, Qi; Zhang, Youxue; Lou, Liandi; Ding, Daoqun

    2015-01-01

    Disgust, an emotion motivating withdrawal from offensive stimuli, protects us from the risk of biological pathogens and sociomoral violations. Homogeneity of its two types, namely, core and moral disgust has been under intensive debate. To examine the dynamic relationship between them, we recorded event-related potentials (ERPs) for core disgust, moral disgust and neutral pictures while participants performed a modified oddball task. ERP analysis revealed that N1 and P2 amplitudes were largest for the core disgust pictures, indicating automatic processing of the core disgust-evoking pictures. N2 amplitudes were higher for pictures evoking moral disgust relative to core disgust and neutral pictures, reflecting a violation of social norms. The core disgust pictures elicited larger P3 and late positive potential (LPP) amplitudes in comparison with the moral disgust pictures which, in turn, elicited larger P3 and LPP amplitudes when compared to the neutral pictures. Taken together, these findings indicated that core and moral disgust pictures elicited different neural activities at various stages of information processing, which provided supporting evidence for the heterogeneity of disgust.

  9. Precursors to potential severe core damage accidents: 1992, A status report. Volume 17, Main report and Appendix A

    Energy Technology Data Exchange (ETDEWEB)

    Cox, D.F.; Cletcher, J.W.; Copinger, D.A.; Cross-Dial, A.E.; Morris, R.H.; Vanden Heuvel, L.N. [Oak Ridge National Lab., TN (United States); Dolan, B.W.; Jansen, J.M.; Minarick, J.W. [Science Applications International Corp., Oak Ridge, TN (United States); Lau, W.; Salyer, W.D. [Reliability and Performance Associates (United States)

    1993-12-01

    Twenty-seven operational events with conditional probabilities of subsequent severe core damage of 1.0 {times} 10E-06 or higher occurring at commercial light-water reactors during 1992 are considered to be precursors to potential core damage. These are described along with associated significance estimates, categorization, and subsequent analyses. The report discusses (1) the general rationale for this study, (2) the selection and documentation of events as precursors, (3) the estimation and use of conditional probabilities of subsequent severe core damage to rank precursor events, and (4) the plant models used in the analysis process.

  10. Spoilage potential of Pseudomonas species isolated from goat milk.

    Science.gov (United States)

    Scatamburlo, T M; Yamazi, A K; Cavicchioli, V Q; Pieri, F A; Nero, L A

    2015-02-01

    Pseudomonas spp. are usually associated with spoilage microflora of dairy products due to their proteolytic potential. This is of particular concern for protein-based products, such as goat milk cheeses and fermented milks. Therefore, the goal of the present study was to characterize the proteolytic activity of Pseudomonas spp. isolated from goat milk. Goat milk samples (n=61) were obtained directly from bulk tanks on dairy goat farms (n=12), and subjected to a modified International Organization for Standardization (ISO) protocol to determine the number and proteolytic activity of Pseudomonas spp. Isolates (n=82) were obtained, identified by PCR, and subjected to pulsed-field gel electrophoresis with XbaI macro-restriction. Then, the isolates were subjected to PCR to detect the alkaline protease gene (apr), and phenotypic tests were performed to check proteolytic activity at 7°C, 25°C, and 35°C. Mean Pseudomonas spp. counts ranged from 2.9 to 4.8 log cfu/mL, and proteolytic Pseudomonas spp. counts ranged from 1.9 to 4.6 log cfu/mL. All isolates were confirmed to be Pseudomonas spp., and 41 were identified as Pseudomonas fluorescens, which clustered into 5 groups sharing approximately 82% similarity. Thirty-six isolates (46.9%) were positive for the apr gene; and 57 (69.5%) isolates presented proteolytic activity at 7°C, 82 (100%) at 25°C, and 64 (78%) at 35°C. The isolates were distributed ubiquitously in the goat farms, and no relationship among isolates was observed when the goat farms, presence of apr, pulsotypes, and proteolytic activity were taken into account. We demonstrated proteolytic activity of Pseudomonas spp. present in goat milk by phenotypic and genotypic tests and indicated their spoilage potential at distinct temperatures. Based on these findings and the ubiquity of Pseudomonas spp. in goat farm environments, proper monitoring and control of Pseudomonas spp. during production are critical. Copyright © 2015 American Dairy Science Association

  11. Potential of Penicillium Species in the Bioremediation Field

    Directory of Open Access Journals (Sweden)

    Ana Lúcia Leitão

    2009-04-01

    Full Text Available The effects on the environment of pollution, particularly that caused by various industrial activities, have been responsible for the accelerated fluxes of organic and inorganic matter in the ecosphere. Xenobiotics such as phenol, phenolic compounds, polycyclic aromatic hydrocarbons (PAHs, and heavy metals, even at low concentrations, can be toxic to humans and other forms of life. Many of the remediation technologies currently being used for contaminated soil and water involve not only physical and chemical treatment, but also biological processes, where microbial activity is the responsible for pollutant removal and/or recovery. Fungi are present in aquatic sediments, terrestrial habitats and water surfaces and play a significant part in natural remediation of metal and aromatic compounds. Fungi also have advantages over bacteria since fungal hyphae can penetrate contaminated soil, reaching not only heavy metals but also xenobiotic compounds. Despite of the abundance of such fungi in wastes, penicillia in particular have received little attention in bioremediation and biodegradation studies. Additionally, several studies conducted with different strains of imperfecti fungi, Penicillium spp. have demonstrated their ability to degrade different xenobiotic compounds with low co-substrate requirements, and could be potentially interesting for the development of economically feasible processes for pollutant transformation.

  12. Pan-Genome Analysis of Human Gastric Pathogen H. pylori: Comparative Genomics and Pathogenomics Approaches to Identify Regions Associated with Pathogenicity and Prediction of Potential Core Therapeutic Targets

    DEFF Research Database (Denmark)

    Ali, Amjad; Naz, Anam; Soares, Siomar C.

    2015-01-01

    -genome approach; the predicted conserved gene families (1,193) constitute similar to 77% of the average H. pylori genome and 45% of the global gene repertoire of the species. Reverse vaccinology strategies have been adopted to identify and narrow down the potential core-immunogenic candidates. Total of 28 nonhost....... Pan-genome analyses of the global representative H. pylori isolates consisting of 39 complete genomes are presented in this paper. Phylogenetic analyses have revealed close relationships among geographically diverse strains of H. pylori. The conservation among these genomes was further analyzed by pan...

  13. Use of plant woody species electrical potential for irrigation scheduling.

    Science.gov (United States)

    Ríos-Rojas, Liliana; Morales-Moraga, David; Alcalde, José A; Gurovich, Luis A

    2015-01-01

    The electrical response of plants to environmental stimuli can be measured and quantitatively related to the intensity of several stimulating sources, like temperature, solar radiation, soil water content, evapotranspiration rates, sap flow and dendrometric cycles. These relations can be used to assess the influence of different environmental situations on soil water availability to plants, defined as a steady state condition between leaf transpirative flow and soil water flow to plant roots. A restricted soil water flow due to soil dryness can trigger water stress in plants, if the atmospheric evaporative demand is high, causing partial stomata closure as a physiological response to avoid plant dehydration; water stressed and unstressed plants manifest a differential electrical response. Real time plant electrical response measurements can anticipate actions that prevent the plant reaching actual stress conditions, optimizing stomata gas exchange and photosynthetic rates. An electrophysiological sensor developed in this work, allows remote real-time recording information on plant electrical potential (EP) in the field, which is highly related to EP measurements obtained with a laboratory Keithley voltmeter sensor used in an highly controlled experimental setup. Our electrophysiological sensor is a wireless, autonomous devise, which transmits EP information via Internet to a data server. Using both types of sensors (EP electrodes with a Keithley voltmeter and the electrophysiological sensor), we measured in real time the electrical responses of Persea americana and Prunus domestica plants, to induced water deficits. The differential response for 2 scenarios: irrigation and water restriction is identified by a progressive change in slope on the daily maximal and minimal electric signal values in stressed plants, and a zero-slope for similar signals for well-watered plants. Results show a correspondence between measured signals obtained by our electrophysiological

  14. Hepatitis C virus core protein potentiates proangiogenic activity of hepatocellular carcinoma cells.

    Science.gov (United States)

    Shao, Yu-Yun; Hsieh, Min-Shu; Wang, Han-Yu; Li, Yong-Shi; Lin, Hang; Hsu, Hung-Wei; Huang, Chung-Yi; Hsu, Chih-Hung; Cheng, Ann-Lii

    2017-10-17

    Increased angiogenic activity has been demonstrated in hepatitis C virus (HCV)-related hepatocellular carcinoma (HCC), but the mechanism was unclear. To study the role of HCV core protein, we used tube formation and Matrigel plug assays to assess the proangiogenic activity of an HCC cell line, HuH7, and 2 of its stable clones-HuH7-core-high and HuH7-core-low, with high and low HCV core protein expression, respectively. In both assays, HuH7-core-high and HuH7-core-low cells dose-dependently induced stronger angiogenesis than control cells. HuH7 cells with HCV core protein expression showed increased mRNA and protein expression of vascular endothelial growth factor (VEGF). VEGF inhibition by bevacizumab reduced the proangiogenic activity of HuH7-core-high cells. The promotor region of VEGF contains the binding site of activator protein-1 (AP-1). Compared with controls, HuH7-core-high cells had an increased AP-1 activity and nuclear localization of phospho-c-jun. AP-1 inhibition using either RNA knockdown or AP-1 inhibitors reduced the VEGF mRNA expression and the proangiogenic activity of HuH7-core-high cells. Among 131 tissue samples from HCC patients, HCV-related HCC revealed stronger VEGF expression than did hepatitis B virus-related HCC. In conclusion, increased VEGF expression through AP-1 activation is a crucial mechanism underlying the proangiogenic activity of the HCV core protein in HCC cells.

  15. Chemical, Bioactive, and Antioxidant Potential of Twenty Wild Culinary Mushroom Species

    Science.gov (United States)

    Sharma, S. K.; Gautam, N.

    2015-01-01

    The chemical, bioactive, and antioxidant potential of twenty wild culinary mushroom species being consumed by the people of northern Himalayan regions has been evaluated for the first time in the present study. Nutrients analyzed include protein, crude fat, fibres, carbohydrates, and monosaccharides. Besides, preliminary study on the detection of toxic compounds was done on these species. Bioactive compounds evaluated are fatty acids, amino acids, tocopherol content, carotenoids (β-carotene, lycopene), flavonoids, ascorbic acid, and anthocyanidins. Fruitbodies extract of all the species was tested for different types of antioxidant assays. Although differences were observed in the net values of individual species all the species were found to be rich in protein, and carbohydrates and low in fat. Glucose was found to be the major monosaccharide. Predominance of UFA (65–70%) over SFA (30–35%) was observed in all the species with considerable amounts of other bioactive compounds. All the species showed higher effectiveness for antioxidant capacities. PMID:26199938

  16. Chemical, Bioactive, and Antioxidant Potential of Twenty Wild Culinary Mushroom Species

    Directory of Open Access Journals (Sweden)

    S. K. Sharma

    2015-01-01

    Full Text Available The chemical, bioactive, and antioxidant potential of twenty wild culinary mushroom species being consumed by the people of northern Himalayan regions has been evaluated for the first time in the present study. Nutrients analyzed include protein, crude fat, fibres, carbohydrates, and monosaccharides. Besides, preliminary study on the detection of toxic compounds was done on these species. Bioactive compounds evaluated are fatty acids, amino acids, tocopherol content, carotenoids (β-carotene, lycopene, flavonoids, ascorbic acid, and anthocyanidins. Fruitbodies extract of all the species was tested for different types of antioxidant assays. Although differences were observed in the net values of individual species all the species were found to be rich in protein, and carbohydrates and low in fat. Glucose was found to be the major monosaccharide. Predominance of UFA (65–70% over SFA (30–35% was observed in all the species with considerable amounts of other bioactive compounds. All the species showed higher effectiveness for antioxidant capacities.

  17. Chemical, Bioactive, and Antioxidant Potential of Twenty Wild Culinary Mushroom Species.

    Science.gov (United States)

    Sharma, S K; Gautam, N

    2015-01-01

    The chemical, bioactive, and antioxidant potential of twenty wild culinary mushroom species being consumed by the people of northern Himalayan regions has been evaluated for the first time in the present study. Nutrients analyzed include protein, crude fat, fibres, carbohydrates, and monosaccharides. Besides, preliminary study on the detection of toxic compounds was done on these species. Bioactive compounds evaluated are fatty acids, amino acids, tocopherol content, carotenoids (β-carotene, lycopene), flavonoids, ascorbic acid, and anthocyanidins. Fruitbodies extract of all the species was tested for different types of antioxidant assays. Although differences were observed in the net values of individual species all the species were found to be rich in protein, and carbohydrates and low in fat. Glucose was found to be the major monosaccharide. Predominance of UFA (65-70%) over SFA (30-35%) was observed in all the species with considerable amounts of other bioactive compounds. All the species showed higher effectiveness for antioxidant capacities.

  18. Basal and prism dislocation cores in magnesium: comparison of first-principles and embedded-atom-potential methods predictions

    International Nuclear Information System (INIS)

    Yasi, J A; Nogaret, T; Curtin, W A; Trinkle, D R; Qi, Y; Hector, L G Jr

    2009-01-01

    The core structures of screw and edge dislocations on the basal and prism planes in Mg, and the associated gamma surfaces, were studied using an ab initio method and the embedded-atom-method interatomic potentials developed by Sun et al and Liu et al. The ab initio calculations predict that the basal plane dislocations dissociate into partials split by 16.7 Å (edge) and 6.3 Å (screw), as compared with 14.3 Å and 12.7 Å (Sun and Liu edge), and 6.3 Å and 1.4 Å (Sun and Liu screw), with the Liu screw dislocation being metastable. In the prism plane, the screw and edge cores are compact and the edge core structures are all similar, while ab initio does not predict a stable prismatic screw in stress-free conditions. These results are qualitatively understood through an examination of the gamma surfaces for interplanar sliding on the basal and prism planes. The Peierls stresses at T = 0 K for basal slip are a few megapascals for the Sun potential, in agreement with experiments, but are ten times larger for the Liu potential. The Peierls stresses for prism slip are 10–40 MPa for both potentials. Overall, the dislocation core structures from ab initio are well represented by the Sun potential in all cases while the Liu potential shows some notable differences. These results suggest that the Sun potential is preferable for studying other dislocations in Mg, particularly the (c + a) dislocations, for which the core structures are much larger and not accessible by ab initio methods

  19. Evidence for a multi-species coccolith volume change over the past two centuries: understanding a potential ocean acidification response

    Directory of Open Access Journals (Sweden)

    P. R. Halloran

    2008-12-01

    Full Text Available Major questions surround the species-specific nature of coccolithophore calcification in response to rising atmospheric CO2 levels. Here we present CaCO3 particle volume distribution data from the coccolith size-fraction of a rapidly accumulating North Atlantic sediment core. Without direct volume measurements on coccoliths produced by individual coccolithophore species, and knowledge of organic, as well as inorganic carbon production, it is not possible to state conclusively the coccolithophore calcification change at this site. However, by analysing the size distribution of CaCO3 particles in the less than 10 μm sediment fraction, we demonstrate a changing particle volume since the late 20th Century consistent with an increase in the mass of coccoliths produced by the larger coccolithophore species, and potentially a decrease in mass of coccoliths produced by the smaller species, present at this location. This finding has significant implications for the realistic representation of an assemblage-wide coccolithophore CO2-calcification response in numerical models.

  20. Inventory of species and cultivars potentially valuable for forest/biomass production

    Energy Technology Data Exchange (ETDEWEB)

    Lavoie, G

    1981-01-01

    To prepare a guide for experiments in mini-rotation or short rotation forest production, potentially valuable species and cultivars have been inventoried. In this text, 288 species are listed under 31 genera, 27 deciduous and 4 coniferous. This partial inventory was made for the Northern Hemisphere and different climates, ranging from the tropical zone to the cold temperate zone. To be included a species had to satisfy the following conditions: ease of established and rapid juvenile growth. The list of species and cultivars is given in alphabetical order. 55 references.

  1. Thermal property and density measurements of samples taken from drilling cores from potential geologic media

    International Nuclear Information System (INIS)

    Lagedrost, J.F.; Capps, W.

    1983-12-01

    Density, steady-state conductivity, enthalpy, specific heat, heat capacity, thermal diffusivity and linear thermal expansion were measured on 59 materials from core drill samples of several geologic media, including rock salt, basalt, and other associated rocks from 7 potential sites for nuclear waste isolation. The measurements were conducted from or near to room temperature up to 500 0 C, or to lower temperatures if limited by specimen cracking or fracturing. Ample documentation establishes the reliability of the property measurement methods and the accuracy of the results. Thermal expansions of salts reached 2.2 to 2.8 percent at 500 0 C. Associated rocks were from 0.6 to 1.6 percent. Basalts were close to 0.3 percent at 500 0 C. Specific heats of salts varied from 0.213 to 0.233 cal g -1 C -1 , and basalts averaged 0.239 cal g -1 C -1 . Thermal conductivities of salts at 50 0 C were from 0.022 to 0.046 wcm -1 C -1 , and at 500 0 C, from 0.012 to 0.027 wcm -1 C -1 . Basalts conductivities ranged from 0.020 to 0.022 wcm -1 C -1 at 100 0 C and 0.016 to 0.018 at 500 0 C. There were no obvious conductivity trends relative to source location. Room temperature densities of salts were from 2.14 to 2.29 gcm -3 , and basalts, from 2.83 to 2.90 gcm -3 . The extreme friability of some materials made specimen fabrication difficult. 21 references, 17 figures, 28 tables

  2. Preparation, process optimization and characterization of core-shell polyurethane/chitosan nanofibers as a potential platform for bioactive scaffolds.

    Science.gov (United States)

    Maleknia, Laleh; Dilamian, Mandana; Pilehrood, Mohammad Kazemi; Sadeghi-Aliabadi, Hojjat; Hekmati, Amir Houshang

    2018-06-01

    In this paper, polyurethane (PU), chitosan (Cs)/polyethylene oxide (PEO), and core-shell PU/Cs nanofibers were produced at the optimal processing conditions using electrospinning technique. Several methods including SEM, TEM, FTIR, XRD, DSC, TGA and image analysis were utilized to characterize these nanofibrous structures. SEM images exhibited that the core-shell PU/Cs nanofibers were spun without any structural imperfections at the optimized processing conditions. TEM image confirmed the PU/Cs core-shell nanofibers were formed apparently. It that seems the inclusion of Cs/PEO to the shell, did not induce the significant variations in the crystallinity in the core-shell nanofibers. DSC analysis showed that the inclusion of Cs/PEO led to the glass temperature of the composition increased significantly compared to those of neat PU nanofibers. The thermal degradation of core-shell PU/Cs was similar to PU nanofibers degradation due to the higher PU concentration compared to other components. It was hypothesized that the core-shell PU/Cs nanofibers can be used as a potential platform for the bioactive scaffolds in tissue engineering. Further biological tests should be conducted to evaluate this platform as a three dimensional scaffold with the capabilities of releasing the bioactive molecules in a sustained manner.

  3. Potential DNA barcodes for Melilotus species based on five single loci and their combinations.

    Directory of Open Access Journals (Sweden)

    Fan Wu

    Full Text Available Melilotus, an annual or biennial herb, belongs to the tribe Trifolieae (Leguminosae and consists of 19 species. As an important green manure crop, diverse Melilotus species have different values as feed and medicine. To identify different Melilotus species, we examined the efficiency of five candidate regions as barcodes, including the internal transcribed spacer (ITS and two chloroplast loci, rbcL and matK, and two non-coding loci, trnH-psbA and trnL-F. In total, 198 individuals from 98 accessions representing 18 Melilotus species were sequenced for these five potential barcodes. Based on inter-specific divergence, we analysed sequences and confirmed that each candidate barcode was able to identify some of the 18 species. The resolution of a single barcode and its combinations ranged from 33.33% to 88.89%. Analysis of pairwise distances showed that matK+rbcL+trnL-F+trnH-psbA+ITS (MRTPI had the greatest value and rbcL the least. Barcode gap values and similarity value analyses confirmed these trends. The results indicated that an ITS region, successfully identifying 13 of 18 species, was the most appropriate single barcode and that the combination of all five potential barcodes identified 16 of the 18 species. We conclude that MRTPI is the most effective tool for Melilotus species identification. Taking full advantage of the barcode system, a clear taxonomic relationship can be applied to identify Melilotus species and enhance their practical production.

  4. The measurement of electrostatic potentials in core/shell GaN nanowires using off-axis electron holography

    DEFF Research Database (Denmark)

    Yazdi, Sadegh; Kasama, Takeshi; Ciechonski, R

    2013-01-01

    Core-shell GaN nanowires are expected to be building blocks of future light emitting devices. Here we apply off-axis electron holography to map the electrostatic potential distributions in such nanowires. To access the cross-section of selected individual nanowires, focused ion beam (FIB) milling...... is used. Furthermore, to assess the influence of FIB damage, the dopant potential measured from an intact NW is compared with a FIB prepared one. It is shown that in addition to the built-in potential between the p-type shell and unintentionally n-type under-layer there is a potential barrier between...... the core and under-layer which are both unintentionally n-type doped....

  5. Dithranol-loaded lipid-core nanocapsules improve the photostability and reduce the in vitro irritation potential of this drug

    Energy Technology Data Exchange (ETDEWEB)

    Savian, Ana L. [Programa de Pós-Graduação em Ciências Farmacêuticas, Universidade Federal de Santa Maria, Av. Roraima, 1000, Santa Maria, RS 97105-900 (Brazil); Rodrigues, Daiane [Curso de Farmácia, Centro de Ciências da Saúde, Universidade Federal de Santa Maria, Av. Roraima, 1000, Santa Maria, RS 97105-900 (Brazil); Weber, Julia; Ribeiro, Roseane F. [Programa de Pós-Graduação em Ciências Farmacêuticas, Universidade Federal de Santa Maria, Av. Roraima, 1000, Santa Maria, RS 97105-900 (Brazil); Motta, Mariana H. [Curso de Farmácia, Centro de Ciências da Saúde, Universidade Federal de Santa Maria, Av. Roraima, 1000, Santa Maria, RS 97105-900 (Brazil); Schaffazick, Scheila R.; Adams, Andréa I.H. [Programa de Pós-Graduação em Ciências Farmacêuticas, Universidade Federal de Santa Maria, Av. Roraima, 1000, Santa Maria, RS 97105-900 (Brazil); Andrade, Diego F. de; Beck, Ruy C.R. [Programa de Pós-Graduação em Ciências Farmacêuticas, Universidade Federal do Rio Grande do Sul, Av. Ipiranga, 2752, Porto Alegre, RS 90610-000 (Brazil); and others

    2015-01-01

    Dithranol is a very effective drug for the topical treatment of psoriasis. However, it has some adverse effects such as irritation and stain in the skin that make its application and patient adherence to treatment difficult. The aims of this work were to prepare and characterize dithranol-loaded nanocapsules as well as to evaluate the photostability and the irritation potential of these nanocarriers. Lipid-core nanocapsules containing dithranol (0.5 mg/mL) were prepared by interfacial deposition of preformed polymer. EDTA (0.05%) or ascorbic acid (0.02%) was used as antioxidants. After preparation, dithranol-loaded lipid-core nanocapsules showed satisfactory characteristics: drug content close to the theoretical concentration, encapsulation efficiency of about 100%, nanometric mean size (230–250 nm), polydispersity index below 0.25, negative zeta potential, and pH values from 4.3 to 5.6. In the photodegradation study against UVA light, we observed a higher stability of the dithranol-loaded lipid-core nanocapsules comparing to the solution containing the free drug (half-life times around 4 and 1 h for the dithranol-loaded lipid-core nanocapsules and free drug solution containing EDTA, respectively; half-life times around 17 and 7 h for the dithranol-loaded lipid-core nanocapsules and free drug solution containing ascorbic acid, respectively). Irritation test by HET-CAM method was conducted to evaluate the safety of the formulations. From the results it was found that the nanoencapsulation of the drug decreased its toxicity compared to the effects observed for the free drug. - Highlights: • Strategy to prepare lipid-core nanocapsules containing dithranol • Evaluation of the nanoencapsulation effect on the photostability and irritation • Evaluation of the in vitro release of dithranol-loaded lipid-core nanocapsules.

  6. Impact of Bee Species and Plant Density on Alfalfa Pollination and Potential for Gene Flow

    Directory of Open Access Journals (Sweden)

    Johanne Brunet

    2010-01-01

    Full Text Available In outcrossing crops like alfalfa, various bee species can contribute to pollination and gene flow in seed production fields. With the increasing use of transgenic crops, it becomes important to determine the role of these distinct pollinators on alfalfa pollination and gene flow. The current study examines the relative contribution of honeybees, three bumble bee species, and three solitary bee species to pollination and gene flow in alfalfa. Two wild solitary bee species and one wild bumble bee species were best at tripping flowers, while the two managed pollinators commonly used in alfalfa seed production, honeybees and leaf cutting bees, had the lowest tripping rate. Honeybees had the greatest potential for gene flow and risk of transgene escape relative to the other pollinators. For honeybees, gene flow and risk of transgene escape were not affected by plant density although for the three bumble bee species gene flow and risk of transgene escape were the greatest in high-density fields.

  7. Quantum Effects for a Proton in a Low-Barrier, Double-Well Potential: Core Level Photoemission Spectroscopy of Acetylacetone.

    Science.gov (United States)

    Feyer, Vitaliy; Prince, Kevin C; Coreno, Marcello; Melandri, Sonia; Maris, Assimo; Evangelisti, Luca; Caminati, Walther; Giuliano, Barbara M; Kjaergaard, Henrik G; Carravetta, Vincenzo

    2018-02-01

    We have performed core level photoemission spectroscopy of gaseous acetylacetone, its fully deuterated form, and two derivatives, benzoylacetone and dibenzoylmethane. These molecules show intramolecular hydrogen bonds, with a proton located in a double-well potential, whose barrier height is different for the three compounds. This has allowed us to examine the effect of the double-well potential on photoemission spectra. Two distinct O 1s core hole peaks are observed, previously assigned to two chemical states of oxygen. We provide an alternative assignment of the double-peak structure of O 1s spectra by taking full account of the extended nature of the wave function associated with the nuclear motion of the proton, the shape of the ground and final state potentials in which the proton is located, and the nonzero temperature of the samples. The peaks are explained in terms of an unusual Franck-Condon factor distribution.

  8. Effect of attractive interactions on the water-like anomalies of a core-softened model potential.

    Science.gov (United States)

    Pant, Shashank; Gera, Tarun; Choudhury, Niharendu

    2013-12-28

    It is now well established that water-like anomalies can be reproduced by a spherically symmetric potential with two length scales, popularly known as core-softened potential. In the present study we aim to investigate the effect of attractive interactions among the particles in a model fluid interacting with core-softened potential on the existence and location of various water-like anomalies in the temperature-pressure plane. We employ extensive molecular dynamic simulations to study anomalous nature of various order parameters and properties under isothermal compression. Order map analyses have also been done for all the potentials. We observe that all the systems with varying depth of attractive wells show structural, dynamic, and thermodynamic anomalies. As many of the previous studies involving model water and a class of core softened potentials have concluded that the structural anomaly region encloses the diffusion anomaly region, which in turn, encloses the density anomaly region, the same pattern has also been observed in the present study for the systems with less depth of attractive well. For the systems with deeper attractive well, we observe that the diffusion anomaly region shifts toward higher densities and is not always enclosed by the structural anomaly region. Also, density anomaly region is not completely enclosed by diffusion anomaly region in this case.

  9. A new parameter-free soft-core potential for silica and its application to simulation of silica anomalies

    Energy Technology Data Exchange (ETDEWEB)

    Izvekov, Sergei, E-mail: sergiy.izvyekov.civ@mail.mil; Rice, Betsy M. [Weapons and Materials Research Directorate, U.S. Army Research Laboratory, Aberdeen Proving Ground, Maryland 21005 (United States)

    2015-12-28

    A core-softening of the effective interaction between oxygen atoms in water and silica systems and its role in developing anomalous thermodynamic, transport, and structural properties have been extensively debated. For silica, the progress with addressing these issues has been hampered by a lack of effective interaction models with explicit core-softening. In this work, we present an extension of a two-body soft-core interatomic force field for silica recently reported by us [S. Izvekov and B. M. Rice, J. Chem. Phys. 136(13), 134508 (2012)] to include three-body forces. Similar to two-body interaction terms, the three-body terms are derived using parameter-free force-matching of the interactions from ab initio MD simulations of liquid silica. The derived shape of the O–Si–O three-body potential term affirms the existence of repulsion softening between oxygen atoms at short separations. The new model shows a good performance in simulating liquid, amorphous, and crystalline silica. By comparing the soft-core model and a similar model with the soft-core suppressed, we demonstrate that the topology reorganization within the local tetrahedral network and the O–O core-softening are two competitive mechanisms responsible for anomalous thermodynamic and kinetic behaviors observed in liquid and amorphous silica. The studied anomalies include the temperature of density maximum locus and anomalous diffusivity in liquid silica, and irreversible densification of amorphous silica. We show that the O–O core-softened interaction enhances the observed anomalies primarily through two mechanisms: facilitating the defect driven structural rearrangements of the silica tetrahedral network and modifying the tetrahedral ordering induced interactions toward multiple characteristic scales, the feature which underlies the thermodynamic anomalies.

  10. Addressing potential local adaptation in species distribution models: implications for conservation under climate change

    Science.gov (United States)

    Hällfors, Maria Helena; Liao, Jishan; Dzurisin, Jason D. K.; Grundel, Ralph; Hyvärinen, Marko; Towle, Kevin; Wu, Grace C.; Hellmann, Jessica J.

    2016-01-01

    Species distribution models (SDMs) have been criticized for involving assumptions that ignore or categorize many ecologically relevant factors such as dispersal ability and biotic interactions. Another potential source of model error is the assumption that species are ecologically uniform in their climatic tolerances across their range. Typically, SDMs to treat a species as a single entity, although populations of many species differ due to local adaptation or other genetic differentiation. Not taking local adaptation into account, may lead to incorrect range prediction and therefore misplaced conservation efforts. A constraint is that we often do not know the degree to which populations are locally adapted, however. Lacking experimental evidence, we still can evaluate niche differentiation within a species' range to promote better conservation decisions. We explore possible conservation implications of making type I or type II errors in this context. For each of two species, we construct three separate MaxEnt models, one considering the species as a single population and two of disjunct populations. PCA analyses and response curves indicate different climate characteristics in the current environments of the populations. Model projections into future climates indicate minimal overlap between areas predicted to be climatically suitable by the whole species versus population-based models. We present a workflow for addressing uncertainty surrounding local adaptation in SDM application and illustrate the value of conducting population-based models to compare with whole-species models. These comparisons might result in more cautious management actions when alternative range outcomes are considered.

  11. Chemical, Bioactive, and Antioxidant Potential of Twenty Wild Culinary Mushroom Species

    OpenAIRE

    Sharma, S. K.; Gautam, N.

    2015-01-01

    The chemical, bioactive, and antioxidant potential of twenty wild culinary mushroom species being consumed by the people of northern Himalayan regions has been evaluated for the first time in the present study. Nutrients analyzed include protein, crude fat, fibres, carbohydrates, and monosaccharides. Besides, preliminary study on the detection of toxic compounds was done on these species. Bioactive compounds evaluated are fatty acids, amino acids, tocopherol content, carotenoids (β-carotene, ...

  12. The Common Core and Democratic Education: Examining Potential Costs and Benefits to Public and Private Autonomy

    Science.gov (United States)

    Bindewald, Benjamin J.; Tannebaum, Rory P.; Womac, Patrick

    2016-01-01

    This conceptual paper assesses prevalent critiques of the Common Core State Standards (CCSS) and analyzes content from the CCSS in language arts and literacy to determine whether the standards are likely to support or undermine key democratic aims of education. The authors conclude that critiques of the CCSS have some merit but are generally…

  13. Deuterium excess record in a southern Tibetan ice core and its potential climatic implications

    Energy Technology Data Exchange (ETDEWEB)

    Zhao, Huabiao; Xu, Baiqing; Yao, Tandong; Wu, Guangjian; Lin, Shubiao; Gao, Jing; Wang, Mo [Chinese Academy of Sciences, Key Laboratory of Tibetan Environment Changes and Land Surface Processes, Institute of Tibetan Plateau Research, Beijing (China)

    2012-05-15

    A 55-m long ice core, drilled close to bedrock from Mt. Noijin Kangsang on the southern Tibetan Plateau in summer 2007, was annually dated covering the period of 1864-2006 AD. The stable isotope ratios ({delta} {sup 18}O and {delta}D) of the ice core were measured and thereby the deuterium excess (d) was calculated by d = {delta}D - 8*{delta} {sup 18}O for the individual ice samples. Results show that the d values of the ice samples were predominantly controlled by the moisture sources. The significant increasing trend of annual mean d values along the ice core is mainly related to the rapid warming of the tropical Indian Ocean, although the tendency is subjected to the modulation by the western-derived moisture. The decreasing Indian monsoon precipitation on the southern Tibetan Plateau, physically linked with the increasing tropical Indian Ocean SST, reduced the share of monsoon precipitation in the annual total accumulation, making an additional contribution to the significant increase of annual mean d in the Noijin Kangsang ice core with high values during the past 143 years. (orig.)

  14. Preparation of Multifunctional Fe@Au Core-Shell Nanoparticles with Surface Grafting as a Potential Treatment for Magnetic Hyperthermia

    Directory of Open Access Journals (Sweden)

    Ren-Jei Chung

    2014-01-01

    Full Text Available Iron core gold shell nanoparticles grafted with Methotrexate (MTX and indocyanine green (ICG were synthesized for the first time in this study, and preliminarily evaluated for their potential in magnetic hyperthermia treatment. The core-shell Fe@Au nanoparticles were prepared via the microemulsion process and then grafted with MTX and ICG using hydrolyzed poly(styrene-alt-maleic acid (PSMA to obtain core-shell Fe@Au-PSMA-ICG/MTX nanoparticles. MTX is an anti-cancer therapeutic, and ICG is a fluorescent dye. XRD, TEM, FTIR and UV-Vis spectrometry were performed to characterize the nanoparticles. The data indicated that the average size of the nanoparticles was 6.4 ± 09 nm and that the Au coating protected the Fe core from oxidation. MTX and ICG were successfully grafted onto the surface of the nanoparticles. Under exposure to high frequency induction waves, the superparamagnetic nanoparticles elevated the temperature of a solution in a few minutes, which suggested the potential for an application in magnetic hyperthermia treatment. The in vitro studies verified that the nanoparticles were biocompatible; nonetheless, the Fe@Au-PSMA-ICG/MTX nanoparticles killed cancer cells (Hep-G2 via the magnetic hyperthermia mechanism and the release of MTX.

  15. Preparation of Multifunctional Fe@Au Core-Shell Nanoparticles with Surface Grafting as a Potential Treatment for Magnetic Hyperthermia.

    Science.gov (United States)

    Chung, Ren-Jei; Shih, Hui-Ting

    2014-01-24

    Iron core gold shell nanoparticles grafted with Methotrexate (MTX) and indocyanine green (ICG) were synthesized for the first time in this study, and preliminarily evaluated for their potential in magnetic hyperthermia treatment. The core-shell Fe@Au nanoparticles were prepared via the microemulsion process and then grafted with MTX and ICG using hydrolyzed poly(styrene-alt-maleic acid) (PSMA) to obtain core-shell Fe@Au-PSMA-ICG/MTX nanoparticles. MTX is an anti-cancer therapeutic, and ICG is a fluorescent dye. XRD, TEM, FTIR and UV-Vis spectrometry were performed to characterize the nanoparticles. The data indicated that the average size of the nanoparticles was 6.4 ± 09 nm and that the Au coating protected the Fe core from oxidation. MTX and ICG were successfully grafted onto the surface of the nanoparticles. Under exposure to high frequency induction waves, the superparamagnetic nanoparticles elevated the temperature of a solution in a few minutes, which suggested the potential for an application in magnetic hyperthermia treatment. The in vitro studies verified that the nanoparticles were biocompatible; nonetheless, the Fe@Au-PSMA-ICG/MTX nanoparticles killed cancer cells (Hep-G2) via the magnetic hyperthermia mechanism and the release of MTX.

  16. Phylogeny of Vibrio vulnificus from the Analysis of the Core-Genome: Implications for Intra-Species Taxonomy

    Directory of Open Access Journals (Sweden)

    Francisco J. Roig

    2018-01-01

    Full Text Available Vibrio vulnificus (Vv is a multi-host pathogenic species currently subdivided into three biotypes (Bts. The three Bts are human-pathogens, but only Bt2 is also a fish-pathogen, an ability that is conferred by a transferable virulence-plasmid (pVvbt2. Here we present a phylogenomic analysis from the core genome of 80 Vv strains belonging to the three Bts recovered from a wide range of geographical and ecological sources. We have identified five well-supported phylogenetic groups or lineages (L. L1 comprises a mixture of clinical and environmental Bt1 strains, most of them involved in human clinical cases related to raw seafood ingestion. L2 is formed by a mixture of Bt1 and Bt2 strains from various sources, including diseased fish, and is related to the aquaculture industry. L3 is also linked to the aquaculture industry and includes Bt3 strains exclusively, mostly related to wound infections or secondary septicemia after farmed-fish handling. Lastly, L4 and L5 include a few strains of Bt1 associated with specific geographical areas. The phylogenetic trees for ChrI and II are not congruent to one another, which suggests that inter- and/or intra-chromosomal rearrangements have been produced along Vv evolution. Further, the phylogenetic trees for each chromosome and the virulence plasmid were also not congruent, which also suggests that pVvbt2 has been acquired independently by different clones, probably in fish farms. From all these clones, the one with zoonotic capabilities (Bt2-Serovar E has successfully spread worldwide. Based on these results, we propose a new updated classification of the species based on phylogenetic lineages rather than on Bts, as well as the inclusion of all Bt2 strains in a pathovar with the particular ability to cause fish vibriosis, for which we suggest the name “piscis.”

  17. Mobility and Attenuation Dynamics of Potentially Toxic Chemical Species at an Abandoned Copper Mine Tailings Dump

    Directory of Open Access Journals (Sweden)

    Wilson Mugera Gitari

    2018-02-01

    Full Text Available Large volumes of disposed mine tailings abound in several regions of South Africa, as a consequence of unregulated, unsustainable long years of mining activities. Tailings dumps occupy a large volume of valuable land, and present a potential risk for aquatic systems, through leaching of potentially toxic chemical species. This paper reports on the evaluation of the geochemical processes controlling the mobility of potentially toxic chemical species within the tailings profile, and their potential risk with regard to surface and groundwater systems. Combination of X-ray fluorescence (XRF, X-ray diffraction (XRD, and scanning electron microscopy-energy dispersive spectroscopy (SEM-EDS techniques, show that the tailing profiles are uniform, weakly altered, and vary slightly with depth in both physical and geochemical properties, as well as mineralogical composition. Mineralogical analysis showed the following order of abundance: quartz > epidote > chlorite > muscovite > calcite > hematite within the tailings profiles. The neutralization of the dominant alumino-silicate minerals and the absence of sulfidic minerals, have produced medium alkaline pH conditions (7.97–8.37 at all depths and low concentrations of dissolved Cu (20.21–47.9 µg/L, Zn (0.88–1.80 µg/L, Pb (0.27–0.34 µg/L, and SO42− (15.71–55.94 mg/L in the tailings profile leachates. The relative percentage leach for the potentially toxic chemical species was low in the aqueous phase (Ni 0.081%, Cu 0.006%, and Zn 0.05%. This indicates that the transport load of potentially toxic chemical species from tailings to the aqueous phase is very low. The precipitation of secondary hematite has an important known ability to trap and attenuate the mobility of potentially toxic chemical species (Cu, Zn, and Pb by adsorption on the surface area. Geochemical modelling MINTEQA2 showed that the tailings leachates were below saturation regarding oxyhydroxide minerals, but oversaturated with Cu

  18. Climate-Driven Reshuffling of Species and Genes: Potential Conservation Roles for Species Translocations and Recombinant Hybrid Genotypes.

    Science.gov (United States)

    Scriber, Jon Mark

    2013-12-24

    Comprising 50%-75% of the world's fauna, insects are a prominent part of biodiversity in communities and ecosystems globally. Biodiversity across all levels of biological classifications is fundamentally based on genetic diversity. However, the integration of genomics and phylogenetics into conservation management may not be as rapid as climate change. The genetics of hybrid introgression as a source of novel variation for ecological divergence and evolutionary speciation (and resilience) may generate adaptive potential and diversity fast enough to respond to locally-altered environmental conditions. Major plant and herbivore hybrid zones with associated communities deserve conservation consideration. This review addresses functional genetics across multi-trophic-level interactions including "invasive species" in various ecosystems as they may become disrupted in different ways by rapid climate change. "Invasive genes" (into new species and populations) need to be recognized for their positive creative potential and addressed in conservation programs. "Genetic rescue" via hybrid translocations may provide needed adaptive flexibility for rapid adaptation to environmental change. While concerns persist for some conservationists, this review emphasizes the positive aspects of hybrids and hybridization. Specific implications of natural genetic introgression are addressed with a few examples from butterflies, including transgressive phenotypes and climate-driven homoploid recombinant hybrid speciation. Some specific examples illustrate these points using the swallowtail butterflies (Papilionidae) with their long-term historical data base (phylogeographical diversity changes) and recent (3-decade) climate-driven temporal and genetic divergence in recombinant homoploid hybrids and relatively recent hybrid speciation of Papilio appalachiensis in North America. Climate-induced "reshuffling" (recombinations) of species composition, genotypes, and genomes may become

  19. A cross-species translational pharmacokinetic-pharmacodynamic evaluation of core body temperature reduction by the TRPM8 blocker PF-05105679.

    Science.gov (United States)

    Gosset, James R; Beaumont, Kevin; Matsuura, Tomomi; Winchester, Wendy; Attkins, Neil; Glatt, Sophie; Lightbown, Ian; Ulrich, Kristina; Roberts, Sonia; Harris, Jolie; Mesic, Emir; van Steeg, Tamara; Hijdra, Diana; van der Graaf, Piet H

    2017-11-15

    PF-05105679 is a moderately potent TRPM8 blocker which has been evaluated for the treatment of cold pain sensitivity. The TRPM8 channel is responsible for the sensation of cold environmental temperatures and has been implicated in regulation of core body temperature. Consequently, blockade of TRPM8 has been suggested to result in lowering of core body temperature. As part of the progression to human studies, the effect of PF-05105679 on core body temperature has been investigated in animals. Safety pharmacology studies showed that PF-05105679 reduced core body temperature in a manner that was inversely related to body weight of the species tested (greater exposure to PF-05105679 was required to lower temperature by 1°C in higher species). Based on an allometric (body weight) relationship, it was hypothesized that PF-05105679 would not lower core body temperature in humans at exposures that could exhibit pharmacological effects on cold pain sensation. On administration to humans, PF-05105679 was indeed effective at reversing the cold pain sensation associated with the cold pressor test in the absence of effects on core body temperature. Copyright © 2017 Elsevier B.V. All rights reserved.

  20. α Centauri A as a potential stellar model calibrator: establishing the nature of its core

    Science.gov (United States)

    Nsamba, B.; Monteiro, M. J. P. F. G.; Campante, T. L.; Cunha, M. S.; Sousa, S. G.

    2018-05-01

    Understanding the physical process responsible for the transport of energy in the core of α Centauri A is of the utmost importance if this star is to be used in the calibration of stellar model physics. Adoption of different parallax measurements available in the literature results in differences in the interferometric radius constraints used in stellar modelling. Further, this is at the origin of the different dynamical mass measurements reported for this star. With the goal of reproducing the revised dynamical mass derived by Pourbaix & Boffin, we modelled the star using two stellar grids varying in the adopted nuclear reaction rates. Asteroseismic and spectroscopic observables were complemented with different interferometric radius constraints during the optimisation procedure. Our findings show that best-fit models reproducing the revised dynamical mass favour the existence of a convective core (≳ 70% of best-fit models), a result that is robust against changes to the model physics. If this mass is accurate, then α Centauri A may be used to calibrate stellar model parameters in the presence of a convective core.

  1. The effect of surface-bulk potential difference on the kinetics of intercalation in core-shell active cathode particles

    Science.gov (United States)

    Kazemiabnavi, Saeed; Malik, Rahul; Orvananos, Bernardo; Abdellahi, Aziz; Ceder, Gerbrand; Thornton, Katsuyo

    2018-04-01

    Surface modification of active cathode particles is commonly observed in battery research as either a surface phase evolving during the cycling process, or intentionally engineered to improve capacity retention, rate capability, and/or thermal stability of the cathode material. Here, a continuum-scale model is developed to simulate the galvanostatic charge/discharge of a cathode particle with core-shell heterostructure. The particle is assumed to be comprised of a core material encapsulated by a thin layer of a second phase that has a different open-circuit voltage. The effect of the potential difference between the surface and bulk phases (Ω) on the kinetics of lithium intercalation and the galvanostatic charge/discharge profiles is studied at different values of Ω, C-rates, and exchange current densities. The difference between the Li chemical potential in the surface and bulk phases of the cathode particle results in a concentration difference between these two phases. This leads to a charge/discharge asymmetry in the galvanostatic voltage profiles, causing a decrease in the accessible capacity of the particle. These effects are more significant at higher magnitudes of surface-bulk potential difference. The proposed model provides detailed insight into the kinetics and voltage behavior of the intercalation/de-intercalation processes in core-shell heterostructure cathode particles.

  2. Commonness of Amazonian palm (Arecaceae) species: Cross-scale links and potential determinants

    DEFF Research Database (Denmark)

    Kristiansen, Thea; Svenning, J.-C.; Grández, César

    2009-01-01

    was positively related to topographic niche breadth. Stem height correlated with continental range size and was the only species life-history trait related to any commonness measure. Distance from the study area to a species' range centre did not influence any of the commonness measures. The factors determining......The mechanisms that cause variation in commonness (abundances and range sizes) of species remain debated in ecology, and a repeatedly observed pattern is the positive relation between local abundances and larger scale range sizes. We used the Amazonian palm species (Arecaceae) to investigate...... the dependence between and potential determinants of commonness across three (local, landscape, continental) spatial scales. Commonness at the smaller scales (local abundance, landscape frequency) was estimated using data from 57 transects (5 × 500 m) in primary, non-inundated (terra firme) rainforest...

  3. Bartonella species in small mammals and their potential vectors in Asia

    Directory of Open Access Journals (Sweden)

    Tawisa Jiyipong

    2014-10-01

    Full Text Available In this article, authors review the current knowledge of Bartonella infection in small mammals including rodents, insectivores, bats and exotic small mammal pets and their vectors in Asia. Species of Bartonella are Gram-negative intracellular bacteria that infect erythrocytes of various mammalian and non-mammalian animals and mainly transmitted by blood sucking arthropod vectors. The genus Bartonella includes several species of important human diseases with severe clinical signs. Several new Bartonella species were isolated from rodents and other small mammals, and from human patients in Asia. Bartonella species are identified using standard polymerase chain reaction amplification and a sequencing targeting two housekeeping genes (gltA and rpoB and the internal transcribed spacer fragment. Authors also discuss the implications in term of potential emerging zoonotic diseases.

  4. Kaempferitrin from Uncaria guianensis (Rubiaceae) and its potential as a chemical marker for the species

    International Nuclear Information System (INIS)

    Valente, Ligia M.M.; Liechocki, Sally; Barboza, Rodolfo S.; Paixao, Djavan da; Bizarri, Carlos H.B.; Almeida, M. Beatriz S.; Benevides, Paulo J.C.; Siani, Antonio C.; Magalhaes, Alvicler

    2009-01-01

    Uncaria tomentosa (Willd.) DC. and U. guianensis (Aubl.) Gmel., known as cat's claw, are large woody vines native to the Amazonian and Central American rain forests. The species contain, in different proportions, indole and oxindole alkaloids, triterpenoid glycosides, sterols and proanthocyanidins. U. tomentosa can be chemically identified by its oxindole alkaloid profile and content, whereas U. guianensis has no satisfactorily established chemical markers. This work describes, for the first time, the isolation of kaempferol-3,7-O-(a)-dirhamnoside (kaempferitrin) in Uncaria species. Screening for this compound in leaves, stems or bark of both species through TLC and HPLC-DAD-MS showed the presence of kaempferitrin only in the leaves and stems of U. guianensis, at a ratio almost thirty six times greater in the leaves than in the stems. These results reveal the selectivity of U. guianensis to produce this bioactive flavonoid glycoside, and suggest this compound as a potential chemical marker for the species.(author)

  5. Exact solutions of the Schrodinger equation with the position-dependent mass for a hard-core potential

    International Nuclear Information System (INIS)

    Dong Shihai; Lozada-Cassou, M.

    2005-01-01

    The exact solutions of two-dimensional Schrodinger equation with the position-dependent mass for a hard-core potential are obtained. The eigenvalues related to the position-dependent masses μ 1 and μ 2 , the potential well depth V 0 and the effective range r 0 can be calculated by the boundary condition. We generalize this quantum system to three-dimensional case. The special cases for l=0,1 are studied in detail. For l=0 and c=0, we find that the energy levels will increase with the parameters μ 2 , V 0 and r 0 if μ 1 >μ 2

  6. Horizon scanning for invasive alien species with the potential to threaten biodiversity in Great Britain.

    Science.gov (United States)

    Roy, Helen E; Peyton, Jodey; Aldridge, David C; Bantock, Tristan; Blackburn, Tim M; Britton, Robert; Clark, Paul; Cook, Elizabeth; Dehnen-Schmutz, Katharina; Dines, Trevor; Dobson, Michael; Edwards, François; Harrower, Colin; Harvey, Martin C; Minchin, Dan; Noble, David G; Parrott, Dave; Pocock, Michael J O; Preston, Chris D; Roy, Sugoto; Salisbury, Andrew; Schönrogge, Karsten; Sewell, Jack; Shaw, Richard H; Stebbing, Paul; Stewart, Alan J A; Walker, Kevin J

    2014-12-01

    Invasive alien species (IAS) are considered one of the greatest threats to biodiversity, particularly through their interactions with other drivers of change. Horizon scanning, the systematic examination of future potential threats and opportunities, leading to prioritization of IAS threats is seen as an essential component of IAS management. Our aim was to consider IAS that were likely to impact on native biodiversity but were not yet established in the wild in Great Britain. To achieve this, we developed an approach which coupled consensus methods (which have previously been used for collaboratively identifying priorities in other contexts) with rapid risk assessment. The process involved two distinct phases: Preliminary consultation with experts within five groups (plants, terrestrial invertebrates, freshwater invertebrates, vertebrates and marine species) to derive ranked lists of potential IAS. Consensus-building across expert groups to compile and rank the entire list of potential IAS. Five hundred and ninety-one species not native to Great Britain were considered. Ninety-three of these species were agreed to constitute at least a medium risk (based on score and consensus) with respect to them arriving, establishing and posing a threat to native biodiversity. The quagga mussel, Dreissena rostriformis bugensis, received maximum scores for risk of arrival, establishment and impact; following discussions the unanimous consensus was to rank it in the top position. A further 29 species were considered to constitute a high risk and were grouped according to their ranked risk. The remaining 63 species were considered as medium risk, and included in an unranked long list. The information collated through this novel extension of the consensus method for horizon scanning provides evidence for underpinning and prioritizing management both for the species and, perhaps more importantly, their pathways of arrival. Although our study focused on Great Britain, we suggest

  7. Potential for DNA-based ID of Great Lakes fauna: Species inventories vs. barcode libraries

    Science.gov (United States)

    DNA-based identification of mixed-organism samples offers the potential to greatly reduce the need for resource-intensive morphological identification, which would be of value both to biotic condition assessment and non-native species early-detection monitoring. However the abil...

  8. Potentials of flora species on the yield of honey in Dakka Forest ...

    African Journals Online (AJOL)

    The study assessed the potentials of flora on the yield of honey in Bali Local Government Area of Taraba State. Floral resources that could accommodate possible apicultural industry have not been examined in the study area. Data on plant species (trees, shrubs and herbaceous plants) utilized by honeybees were obtained ...

  9. Spatial Modeling of Industrial Windfall on Soils to Detect Woody Species with Potential for Bioremediation

    Science.gov (United States)

    S. Salazar; M. Mendoza; A. M. Tejeda

    2006-01-01

    A spatial model is presented to explain the concentration of heavy metals (Fe, Cu, Zn, Ni, Cr, Co and Pb), in the soils around the industrial complex near the Port of Veracruz, Mexico. Unexpected low concentration sites where then tested to detect woody plant species that may have the capability to hiperacumulate these contaminants, hence having a potential for...

  10. Experimental terrestrial soil-core microcosm test protocol. A method for measuring the potential ecological effects, fate, and transport of chemicals in terrestrial ecosystems

    Energy Technology Data Exchange (ETDEWEB)

    Van Voris, P.; Tolle, D.A.; Arthur, M.F.

    1985-06-01

    In order to protect the environment properly and have a realistic appraisal of how a chemical will act in the environment, tests of ecological effects and chemical fate must be performed on complex assemblages of biotic and abiotic components (i.e., microcosms) as well as single species. This protocol is one which could be added to a series of tests recently developed as guidelines for Section 4 of the Toxic Substances Control Act (P.L. 94-469; U.S.C., Section 2601-2629). The terrestrial soil-core microcosm is designed to supply site-specific and possibly regional information on the probable chemical fate and ecological effects resulting from release of a chemical substance to a terrestrial ecosystem. The EPA will use the data resulting from this test system to compare the potential hazards of a chemical with others that have been previously evaluated.

  11. Off-shell t-matrix for an exponential potential with non-local core interaction

    International Nuclear Information System (INIS)

    Sarkar, S.B.; Talukdar, B.; Chattarji, D.

    1975-01-01

    The wave function approach of Van Leeuwen and Reiner to the t-matrix is generalized to the case of a non-local potential. The transition matrix element for this potential is obtained. The results are used to compute the s-wave part of the t-matrix for a non-local square well potential combined with an outside exponential potential. (Auth.)

  12. Risk assessment considerations with regard to the potential impacts of pesticides on endangered species.

    Science.gov (United States)

    Brain, Richard A; Teed, R Scott; Bang, JiSu; Thorbek, Pernille; Perine, Jeff; Peranginangin, Natalia; Kim, Myoungwoo; Valenti, Ted; Chen, Wenlin; Breton, Roger L; Rodney, Sara I; Moore, Dwayne R J

    2015-01-01

    Simple, deterministic screening-level assessments that are highly conservative by design facilitate a rapid initial screening to determine whether a pesticide active ingredient has the potential to adversely affect threatened or endangered species. If a worst-case estimate of pesticide exposure is below a very conservative effects metric (e.g., the no observed effects concentration of the most sensitive tested surrogate species) then the potential risks are considered de minimis and unlikely to jeopardize the existence of a threatened or endangered species. Thus by design, such compounded layers of conservatism are intended to minimize potential Type II errors (failure to reject a false null hypothesis of de minimus risk), but correspondingly increase Type I errors (falsely reject a null hypothesis of de minimus risk). Because of the conservatism inherent in screening-level risk assessments, higher-tier scientific information and analyses that provide additional environmental realism can be applied in cases where a potential risk has been identified. This information includes community-level effects data, environmental fate and exposure data, monitoring data, geospatial location and proximity data, species biology data, and probabilistic exposure and population models. Given that the definition of "risk" includes likelihood and magnitude of effect, higher-tier risk assessments should use probabilistic techniques that more accurately and realistically characterize risk. Moreover, where possible and appropriate, risk assessments should focus on effects at the population and community levels of organization rather than the more traditional focus on the organism level. This document provides a review of some types of higher-tier data and assessment refinements available to more accurately and realistically evaluate potential risks of pesticide use to threatened and endangered species. © 2014 SETAC.

  13. Climate-Driven Reshuffling of Species and Genes: Potential Conservation Roles for Species Translocations and Recombinant Hybrid Genotypes

    Directory of Open Access Journals (Sweden)

    Jon Mark Scriber

    2013-12-01

    Full Text Available Comprising 50%–75% of the world’s fauna, insects are a prominent part of biodiversity in communities and ecosystems globally. Biodiversity across all levels of biological classifications is fundamentally based on genetic diversity. However, the integration of genomics and phylogenetics into conservation management may not be as rapid as climate change. The genetics of hybrid introgression as a source of novel variation for ecological divergence and evolutionary speciation (and resilience may generate adaptive potential and diversity fast enough to respond to locally-altered environmental conditions. Major plant and herbivore hybrid zones with associated communities deserve conservation consideration. This review addresses functional genetics across multi-trophic-level interactions including “invasive species” in various ecosystems as they may become disrupted in different ways by rapid climate change. “Invasive genes” (into new species and populations need to be recognized for their positive creative potential and addressed in conservation programs. “Genetic rescue” via hybrid translocations may provide needed adaptive flexibility for rapid adaptation to environmental change. While concerns persist for some conservationists, this review emphasizes the positive aspects of hybrids and hybridization. Specific implications of natural genetic introgression are addressed with a few examples from butterflies, including transgressive phenotypes and climate-driven homoploid recombinant hybrid speciation. Some specific examples illustrate these points using the swallowtail butterflies (Papilionidae with their long-term historical data base (phylogeographical diversity changes and recent (3-decade climate-driven temporal and genetic divergence in recombinant homoploid hybrids and relatively recent hybrid speciation of Papilio appalachiensis in North America. Climate-induced “reshuffling” (recombinations of species composition, genotypes

  14. Precursors to potential severe core damage accidents: 1994, a status report. Volume 21: Main report and appendices A--H

    International Nuclear Information System (INIS)

    Belles, R.J.; Cletcher, J.W.; Copinger, D.A.; Vanden Heuvel, L.N.; Dolan, B.W.; Minarick, J.W.

    1995-12-01

    Nine operational events that affected eleven commercial light-water reactors (LWRs) during 1994 and that are considered to be precursors to potential severe core damage are described. All these events had conditional probabilities of subsequent severe core damage greater than or equal to 1.0 x 10 -6 . These events were identified by computer-screening the 1994 licensee event reports from commercial LWRs to identify those that could be potential precursors. Candidate precursors were then selected and evaluated in a process similar to that used in previous assessments. Selected events underwent engineering evaluation that identified, analyzed, and documented the precursors. Other events designated by the Nuclear Regulatory Commission (NRC) also underwent a similar evaluation. Finally, documented precursors were submitted for review by licensees and NRC headquarters and regional offices to ensure that the plant design and its response to the precursor were correctly characterized. This study is a continuation of earlier work, which evaluated 1969--1981 and 1984--1993 events. The report discusses the general rationale for this study, the selection and documentation of events as precursors, and the estimation of conditional probabilities of subsequent severe core damage for events. This document is bound in two volumes: Vol. 21 contains the main report and Appendices A--H; Vol. 22 contains Appendix 1

  15. Potential of thorium-based fuel cycle for PWR core to reduce plutonium and long-term toxicity

    Energy Technology Data Exchange (ETDEWEB)

    Joo, Hyung Kook; Kim, Taek Kyum; Kim, Young Jin [Korea Atomic Energy Research Institute, Taejon (Korea)

    1999-01-01

    The cross section libraries and calculation methods of the participants were inter-compared through the first stage benchmark calculation. The multiplication factor of unit cell benchmark are in good agreement, but there is significant discrepancies of 2.3 to 3.5 %k at BOC and at EOC between the calculated infinite multiplication factors of each participants for the assembly benchmark. Our results with HELIOS show a reasonable agreement with the others except the MTC value at EOC. To verify the potential of the thorium-based fuel to consume the plutonium and to reduce the radioactivity from the spent fuel, the conceptual core with ThO{sub 2}-PuO{sub 2} or MOX fuel were constructed. The composition and quantity of plutonium isotopes and the radioactivity level of spent fuel for conceptual cores were analyzed, and the neutronic characteristics of conceptual cores were also calculated. The nuclear characteristics for ThO{sub 2}-PuO{sub 2} thorium fueled core was similar to MOX fueled core, mainly due to the same seed fuel material, plutonium. For the capability of plutonium consumption, ThO{sub 2}-PuO{sub 2} thorium fuel can consume plutonium 2.1-2.4 times MOX fuel. The fraction of fissile plutonium in the spent ThO{sub 2}-PuO{sub 2} thorium fuel is more favorable in view of plutonium consumption and non-proliferation than MOX fuel. The radioactivity of spent ThO{sub 2}-PuO{sub 2} thorium and MOX fuel batches were calculated. Since plutonium isotopes are dominant for the long-term radioactivity, ThO{sub 2}-PuO{sub 2} thorium has almost the same level of radioactivity as in MOX fuel for a long-term perspective. (author). 22 figs., 11 tabs.

  16. Organic Redox Species in Aqueous Flow Batteries: Redox Potentials, Chemical Stability and Solubility

    Science.gov (United States)

    Wedege, Kristina; Dražević, Emil; Konya, Denes; Bentien, Anders

    2016-01-01

    Organic molecules are currently investigated as redox species for aqueous low-cost redox flow batteries (RFBs). The envisioned features of using organic redox species are low cost and increased flexibility with respect to tailoring redox potential and solubility from molecular engineering of side groups on the organic redox-active species. In this paper 33, mainly quinone-based, compounds are studied experimentially in terms of pH dependent redox potential, solubility and stability, combined with single cell battery RFB tests on selected redox pairs. Data shows that both the solubility and redox potential are determined by the position of the side groups and only to a small extent by the number of side groups. Additionally, the chemical stability and possible degradation mechanisms leading to capacity loss over time are discussed. The main challenge for the development of all-organic RFBs is to identify a redox pair for the positive side with sufficiently high stability and redox potential that enables battery cell potentials above 1 V. PMID:27966605

  17. Organic Redox Species in Aqueous Flow Batteries: Redox Potentials, Chemical Stability and Solubility

    Science.gov (United States)

    Wedege, Kristina; Dražević, Emil; Konya, Denes; Bentien, Anders

    2016-12-01

    Organic molecules are currently investigated as redox species for aqueous low-cost redox flow batteries (RFBs). The envisioned features of using organic redox species are low cost and increased flexibility with respect to tailoring redox potential and solubility from molecular engineering of side groups on the organic redox-active species. In this paper 33, mainly quinone-based, compounds are studied experimentially in terms of pH dependent redox potential, solubility and stability, combined with single cell battery RFB tests on selected redox pairs. Data shows that both the solubility and redox potential are determined by the position of the side groups and only to a small extent by the number of side groups. Additionally, the chemical stability and possible degradation mechanisms leading to capacity loss over time are discussed. The main challenge for the development of all-organic RFBs is to identify a redox pair for the positive side with sufficiently high stability and redox potential that enables battery cell potentials above 1 V.

  18. Probability of lek collapse is lower inside sage-grouse Core Areas: Effectiveness of conservation policy for a landscape species.

    Directory of Open Access Journals (Sweden)

    Emma Suzuki Spence

    Full Text Available Greater sage-grouse (Centrocercus urophasianus occupy sagebrush (Artemisia spp. habitats in 11 western states and 2 Canadian provinces. In September 2015, the U.S. Fish and Wildlife Service announced the listing status for sage-grouse had changed from warranted but precluded to not warranted. The primary reason cited for this change of status was that the enactment of new regulatory mechanisms was sufficient to protect sage-grouse populations. One such plan is the 2008, Wyoming Sage Grouse Executive Order (SGEO, enacted by Governor Freudenthal. The SGEO identifies "Core Areas" that are to be protected by keeping them relatively free from further energy development and limiting other forms of anthropogenic disturbances near active sage-grouse leks. Using the Wyoming Game and Fish Department's sage-grouse lek count database and the Wyoming Oil and Gas Conservation Commission database of oil and gas well locations, we investigated the effectiveness of Wyoming's Core Areas, specifically: 1 how well Core Areas encompass the distribution of sage-grouse in Wyoming, 2 whether Core Area leks have a reduced probability of lek collapse, and 3 what, if any, edge effects intensification of oil and gas development adjacent to Core Areas may be having on Core Area populations. Core Areas contained 77% of male sage-grouse attending leks and 64% of active leks. Using Bayesian binomial probability analysis, we found an average 10.9% probability of lek collapse in Core Areas and an average 20.4% probability of lek collapse outside Core Areas. Using linear regression, we found development density outside Core Areas was related to the probability of lek collapse inside Core Areas. Specifically, probability of collapse among leks >4.83 km from inside Core Area boundaries was significantly related to well density within 1.61 km (1-mi and 4.83 km (3-mi outside of Core Area boundaries. Collectively, these data suggest that the Wyoming Core Area Strategy has benefited

  19. Probability of lek collapse is lower inside sage-grouse Core Areas: Effectiveness of conservation policy for a landscape species.

    Science.gov (United States)

    Spence, Emma Suzuki; Beck, Jeffrey L; Gregory, Andrew J

    2017-01-01

    Greater sage-grouse (Centrocercus urophasianus) occupy sagebrush (Artemisia spp.) habitats in 11 western states and 2 Canadian provinces. In September 2015, the U.S. Fish and Wildlife Service announced the listing status for sage-grouse had changed from warranted but precluded to not warranted. The primary reason cited for this change of status was that the enactment of new regulatory mechanisms was sufficient to protect sage-grouse populations. One such plan is the 2008, Wyoming Sage Grouse Executive Order (SGEO), enacted by Governor Freudenthal. The SGEO identifies "Core Areas" that are to be protected by keeping them relatively free from further energy development and limiting other forms of anthropogenic disturbances near active sage-grouse leks. Using the Wyoming Game and Fish Department's sage-grouse lek count database and the Wyoming Oil and Gas Conservation Commission database of oil and gas well locations, we investigated the effectiveness of Wyoming's Core Areas, specifically: 1) how well Core Areas encompass the distribution of sage-grouse in Wyoming, 2) whether Core Area leks have a reduced probability of lek collapse, and 3) what, if any, edge effects intensification of oil and gas development adjacent to Core Areas may be having on Core Area populations. Core Areas contained 77% of male sage-grouse attending leks and 64% of active leks. Using Bayesian binomial probability analysis, we found an average 10.9% probability of lek collapse in Core Areas and an average 20.4% probability of lek collapse outside Core Areas. Using linear regression, we found development density outside Core Areas was related to the probability of lek collapse inside Core Areas. Specifically, probability of collapse among leks >4.83 km from inside Core Area boundaries was significantly related to well density within 1.61 km (1-mi) and 4.83 km (3-mi) outside of Core Area boundaries. Collectively, these data suggest that the Wyoming Core Area Strategy has benefited sage

  20. Synthesis of Lutetium Phosphate/Apoferritin Core-Shell Nanoparticles for Potential Applications in Radioimmunoimaging and Radioimmunotherapy of Cancers

    International Nuclear Information System (INIS)

    Wu, Hong; Engelhard, Mark H.; Wang, Jun; Fisher, Darrell R.; Lin, Yuehe

    2008-01-01

    We report a novel approach for synthesizing LuPO4/apoferritin core-shell nanoparticles based on an apoferritin template, conjugated to the protein biotin. To prepare the nanoparticle conjugates, we used non-radioactive lutetium as a model target or surrogate for radiolutetium (177Lu). The central cavity, multi-channel structure, and chemical properties of apoferritin are well-suited for sequentially diffusing lutetium and phosphate ions into the cavity--resulting in a stable core-shell composite. We characterized the synthesized LuPO4/apoferritin nanoparticle using transmission electron microscopy (TEM) and x-ray photoelectron spectroscopy (XPS). We tested the pre-targeting capability of biotin-modified lutetium/apoferritin nanoparticle using streptavidin-modified magnetic beads and streptavidin-modified fluorescein isothiocyanate (FITC) tracer. This paper presents a simple, fast, and efficient method for synthesizing LuPO4/apoferritin nanoparticle conjugates with biotin for potential applications in radioimmunotherapy and radioimmunoimaging of cancer

  1. Assessment of damage potential to the TMI-2 lower head due to thermal attack by core debris

    International Nuclear Information System (INIS)

    Cronenberg, A.W.; Behling, S.R.; Broughton, J.M.

    1986-06-01

    Camera inspection of the Three Mile Island Unit 2 (TMI-2) inlet plenum region has shown that approximately 10 to 20 percent of the core material loading may have relocated to the lower plenum. Although vessel integrity was maintained, a question of primary concern is ''how close to vessel failure'' did this accident come. This report summarizes the results of thermal analyses aimed at assessing damage potential to the TMI-2 lower head and attached instrument penetration tubes due to thermal attack by hot core debris. Results indicate that the instrument penetration nozzles could have experienced melt failure at localized hot spot regions, with attendant debris drainage and plugging of the instrument lead tubes. However, only minor direct thermal attack of the vessel liner is predicted

  2. A diterpenoid taxodone from Metasequoia glyptostroboides with antimycotic potential against clinical isolates of Candida species.

    Science.gov (United States)

    Bajpai, V K; Park, Y-H; Kang, S C

    2015-03-01

    The increasing importance of clinical isolates of Candida species and emerging resistance of Candida species to current synthetic antifungal agents have stimulated the search for safer and more effective alternative drugs from natural sources. This study was directed towards exploring the antimycotic potential of a diterpenoid compound taxodone isolated from Metasequoia glyptostroboides against pathogenic isolates of Candida species. Antimycotic efficacy of taxodone was evaluated by disc diffusion assay, determination of minimum inhibitory (MIC) and minimum fungicidal (MFC) concentrations, and cell viability assay. To confirm a partial antimycotic mode of action of taxodone, the efficacy of taxodone was determined by measuring the release of 260 nm absorbing materials from the selected Candida species as compared to control. The taxodone at the concentration of 400 μg/disc displayed potential antimycotic effect against the tested clinical and pathogenic isolates of Candida species as diameters of zones of inhibitions, which were found in the range of 11 ± 0.0 to 12.6 ± 0.5mm. The MIC and MFC values of taxodone against the tested clinical isolates were found in the range of 250 to 1000 and 500 to 2000μ g/mL, respectively. On the other hand, the MIC and MFC values of positive control (amphotericin B) against the tested Candida isolates were found in the range of 62.5 to 250 and 500 to 2000 μg/mL. On the viable counts of the tested fungal isolates, the taxodone exerted significant antimycotic effect. Elaborative study of partial mode of action conducted onto the release of 260nm materials (DNA and RNA) revealed potential detrimental effect of taxodone on the membrane integrity of the tested pathogens at MIC concentration. With respect to the antimycotic effect of taxodone against pathogenic and clinical isolates of Candida species, it might be confirmed that bioactive compound taxodone present in M. glyptostroboides holds therapeutic value of medicinal

  3. Prevalence of potentially pathogenic Vibrio species in the seafood marketed in Malaysia.

    Science.gov (United States)

    Elhadi, Nasreldin; Radu, Son; Chen, Chien-Hsien; Nishibuchi, Mitsuaki

    2004-07-01

    Seafood samples obtained in seafood markets and supermarkets at 11 sites selected from four states in Malaysia were examined for the presence of nine potentially pathogenic species from the genus Vibrio between July 1998 and June 1999. We examined 768 sample sets that included shrimp, squid, crab, cockles, and mussels. We extensively examined shrimp samples from Selangor State to determine seasonal variation of Vibrio populations. Eight potentially pathogenic Vibrio species were detected, with overall incidence in the samples at 4.6% for V. cholerae, 4.7% for V. parahaemolyticus, 6.0% for V. vulnificus, 11% for V. alginolyticus, 9.9% for V. metschnikovii, 1.3% for V. mimicus, 13% for V. damsela, 7.6% for V. fluvialis, and 52% for a combined population of all of the above. As many as eight Vibrio species were detected in shrimp and only four in squid and peel mussels. The overall percent incidence of any of the eight vibrios was highest (82%) in cockles (Anadara granosa) among the seafoods examined and was highest (100%) in Kuching, Sarawak State, and lowest (25%) in Penang, Pulau Penang State, among the sampling sites. Of 97 strains of V. cholerae isolated, one strain belonged to the O1 serotype and 14 to the O139 serotype. The results indicate that the various seafood markets in Malaysia are contaminated with potentially pathogenic Vibrio species regardless of the season and suggest that there is a need for adequate consumer protection measures.

  4. THE POTENTIAL OF VEGETATION SPECIES DIVERSITY FOR ECOTOROURISM DEVELOPMENT AT NATURE RESERVE OF PANJALU LAKE

    Directory of Open Access Journals (Sweden)

    Encep Rahman

    2017-06-01

    Full Text Available The Nature Reserve of Panjalu Lake is one of the oldest conservation area in Indonesia. As a conservation area, Panjalu Lake has different species of flora that are useful as germplasm conservation, science and education. This study aims to know the potential of vegetation species diversity for ecotourism development at Nature Reserve of Panjalu Lake. The inventory method used is line plot sampling with intensity 15 % in two paths of 500 m (adjusted according length of the area and 20 m width. Spacing between lines is 200 m and spacing between observation plot is 100 m. Within each path, 50 m x 20 m observation plots were established. The results showed that there are three species of seedlings with highest IVI, namely: Dysoxylum densiflorum Miq. (47.64 %, Calamus zollingerii (47.64 %, and Sterculia macrophylla Vent. (44.37 %. The four species at sapling stage with highest IVI are: Litsea cassiaefolia (114.29 %; Dysoxylum densiflorum Miq (57.14 %; Litsea sp. and Endiandra rubescens Miq (14.29 %. Three species at pole stage with highest IVI, namely: Dysoxylum densiflorum Miq. (143.04%; Litsea cassiaefolia (99.78 % and Artocarpus elasticus Reinw 9.53 %. Three species at tree stage with highest IVI, namely: Dysoxylum densiflorum Miq (147.924 %, Litsea cassiaefolia (68.753 %, and Eugenia fastigiata Miq ( 31.410 %.

  5. Some wild-growing plant species from Serbia and Montenegro as the potential sources of drugs.

    Science.gov (United States)

    Aljancić, I S; Vajs, V E; Tesević, V V; Milosavljević, S M

    2008-01-01

    The results of phytochemical investigation, over the last decade, of some wild-growing plant species from Serbia and Montenegro belonging to the families Asteraceae, Guttiferae and Gentianaceae are reported. Most of the investigated species are endemites and the emphasis in this report is on those exhibiting biological activities that could be regarded as the potential sources of drugs. This review comprises 154 compounds, e.g. sesquiterpene lactones and flavonoids (Asteraceae), xanthones, secoiridoids and C-glucoflavonoids (Gentanaceae) and prenylated phloroglucinols (Guttiferae) as well as some other secondary metabolites, produced by the above families, which could be of pharmacological interest.

  6. XNBR-grafted halloysite nanotube core-shell as a potential compatibilizer for immiscible polymer systems

    International Nuclear Information System (INIS)

    Paran, S.M.R.; Naderi, G.; Ghoreishy, M.H.R.

    2016-01-01

    Highlights: • Attached an utilitarian silane coupling agent to the HNT via a sol-gel method. • Developed and analyzed the HNT/XNBR core-shell particles via sol-gel technique. • Enhanced the reactivity of the surface of HNT through XNBR grafting. • The act of HNT/XNBR as a compatibilizer in PA6/NBR TPEs. • Immiscible Polymer System with a good balanced physical and mechanical properties. - Abstract: Halloysite nanotubes (HNTs) grafted with carboxylated nitrile byutadiene rubber (XNBR) were synthesized via a sol-gel method. The HNTs as an inorganic cores were pre-treated with 3-Glycidoxypropyl trimethoxysilane, then successfully coated with the XNBR as an organic shell. The properties of XNBR-grafted HNTs were characterized by transmission electron microscopy (TEM), Fourier transform infrared spectroscopy (FTIR), attenuated total reflection Fourier transform infrared spectroscopy (ATR-FTIR), X-ray diffraction (XRD) and X-ray photoelectron spectroscopy (XPS). The results suggested that the XNBR grafted to the surfaces of HNTs successfully. Then the TPE nanocomposites based on polyamide-6 (PA6) and nitrile butadiene rubber (NBR) containing various XNBR-grafted and pristine HNTs were prepared via a direct melt mixing method. The morphology, mechanical, dynamic mechanical and rheological properties of the prepared TPE nanocomposites were investigated. The results show that the XNBR-grafted HNTs can effectively improve the morphology and mechanical properties of the PA6/NBR TPEs. The morphology study of the prepared nanocomposites show that the effect of XNBR-grafted HNTs on the size reduction of NBR phase is markedly more effective than the pristine HNTs and rose by 50% in the same concentrations. Mechanical measurements show that the Young’s modulus of the TPE nanocomposites rose by 60% in just 7 wt% of XNBR-grafted HNT loading. The results indicate that the introduction of HNT/XNBR core-shells into the PA6/NBR TPEs can enhances the interfacial interactions

  7. XNBR-grafted halloysite nanotube core-shell as a potential compatibilizer for immiscible polymer systems

    Energy Technology Data Exchange (ETDEWEB)

    Paran, S.M.R.; Naderi, G., E-mail: g.naderi@ippi.ac.ir; Ghoreishy, M.H.R.

    2016-09-30

    Highlights: • Attached an utilitarian silane coupling agent to the HNT via a sol-gel method. • Developed and analyzed the HNT/XNBR core-shell particles via sol-gel technique. • Enhanced the reactivity of the surface of HNT through XNBR grafting. • The act of HNT/XNBR as a compatibilizer in PA6/NBR TPEs. • Immiscible Polymer System with a good balanced physical and mechanical properties. - Abstract: Halloysite nanotubes (HNTs) grafted with carboxylated nitrile byutadiene rubber (XNBR) were synthesized via a sol-gel method. The HNTs as an inorganic cores were pre-treated with 3-Glycidoxypropyl trimethoxysilane, then successfully coated with the XNBR as an organic shell. The properties of XNBR-grafted HNTs were characterized by transmission electron microscopy (TEM), Fourier transform infrared spectroscopy (FTIR), attenuated total reflection Fourier transform infrared spectroscopy (ATR-FTIR), X-ray diffraction (XRD) and X-ray photoelectron spectroscopy (XPS). The results suggested that the XNBR grafted to the surfaces of HNTs successfully. Then the TPE nanocomposites based on polyamide-6 (PA6) and nitrile butadiene rubber (NBR) containing various XNBR-grafted and pristine HNTs were prepared via a direct melt mixing method. The morphology, mechanical, dynamic mechanical and rheological properties of the prepared TPE nanocomposites were investigated. The results show that the XNBR-grafted HNTs can effectively improve the morphology and mechanical properties of the PA6/NBR TPEs. The morphology study of the prepared nanocomposites show that the effect of XNBR-grafted HNTs on the size reduction of NBR phase is markedly more effective than the pristine HNTs and rose by 50% in the same concentrations. Mechanical measurements show that the Young’s modulus of the TPE nanocomposites rose by 60% in just 7 wt% of XNBR-grafted HNT loading. The results indicate that the introduction of HNT/XNBR core-shells into the PA6/NBR TPEs can enhances the interfacial interactions

  8. ENERGY POTENTIAL OF SPECIES FROM FOREST MANAGEMENT PLAN FOR THE RIO GRANDE DO NORTE STATE

    Directory of Open Access Journals (Sweden)

    Rosimeire Cavalcante dos Santos

    2013-06-01

    Full Text Available http://dx.doi.org/10.5902/198050989293The objective was to evaluate the energy potential of woods of species under forest management plan from Seridó region in the Rio Grande do Norte state. It was used the wood species Jurema Preta, Pereiro, Marmeleiro, Catingueira, Mororó, Imburana, Jurema Branca and Mofumbo, at 20 years old, originated from the Dominga´s farm in the Caicó/RN municipality. The density, the content of volatiles, the ash and fixed carbon, calorific value, elemental composition and carbon/nitrogen (C/N and carbon/hydrogen (C/H analysis were carried out in the wood. Additionally, the amount of energy produced in kW.h.m-3 and kW.h.ha-1 for all species was estimated. The experiment was conducted in a completely randomized design with eight treatments (species, four replicates (sample trees, adding up to 32 sampling units. There were significant differences, at 5% significance between treatments for all variables, except for hydrogen percentage and C/H ratio. It was concluded that Mororó´s wood shows high energy potential, and along with Jurema Preta, presents higher energy generation per m3, and provides greater economy for the same productivity. The energy potential Jurema Preta wood´s stands out among the species. Pereiro´s wood stands for energy production per hectare. Marmeleiro and Jurema Branca´s woods are indicated as direct burning potential and Imburana´s wood is not recommended for power generation.

  9. Potential tree species for use in the restoration of unsanitary landfills.

    Science.gov (United States)

    Kim, Kee Dae; Lee, Eun Ju

    2005-07-01

    Given that they represent the most economical option for disposing of refuse, waste landfills are widespread in urban areas. However, landfills generate air and water pollution and require restoration for landscape development. A number of unsanitary waste landfills have caused severe environmental problems in developing countries. This study aimed to investigate the colonization status of different tree species on waste landfills to assess their potential for restoring unsanitary landfills in South Korea. Plot surveys were conducted using 10 x 10-m quadrats at seven waste landfill sites: Bunsuri, Dugiri, Hasanundong, Gomaeri, Kyongseodong, Mojeonri, and Shindaedong. We determined the height, diameter at breast height (DBH), and number of tree species in the plots, and enumerated all saplings landfills, we measured the distance from the presumed mother plant (i.e., the tallest black locust in a patch), height, and DBH of all individuals in black locust patches to determine patch structure. Robinia pseudoacacia, Salix koreensis, and Populus sieboldii formed canopy layers in the waste landfills. The basal area of black locust was 1.51 m(2)/ha, and this species had the highest number of saplings among all tree species. The diameter of the black locust patches ranged from 3.71 to 11.29 m. As the patch diameter increased, the number of regenerated saplings also tended to increase, albeit not significantly. Black locust invaded via bud banks and spread clonally in a concentric pattern across the landfills. This species grew well in the dry habitat of the landfills, and its growth rate was very high. Furthermore, black locust has the ability to fix nitrogen symbiotically; it is therefore considered a well-adapted species for waste landfills. Eleven woody species were selected for screening: Acer palmatum, Albizzia julibrissin, Buxus microphylla var. koreana, Ginkgo biloba, Hibiscus syriacus, Koelreuteria paniculata, Ligustrum obtusifolium, Liriodendron tulipifera, Pinus

  10. Potential Environmental and Ecological Effects of Global Climate Change on Venomous Terrestrial Species in the Wilderness.

    Science.gov (United States)

    Needleman, Robert K; Neylan, Isabelle P; Erickson, Timothy

    2018-06-01

    Climate change has been scientifically documented, and its effects on wildlife have been prognosticated. We sought to predict the overall impact of climate change on venomous terrestrial species. We hypothesize that given the close relationship between terrestrial venomous species and climate, a changing global environment may result in increased species migration, geographical redistribution, and longer seasons for envenomation, which would have repercussions on human health. A retrospective analysis of environmental, ecological, and medical literature was performed with a focus on climate change, toxinology, and future modeling specific to venomous terrestrial creatures. Species included venomous reptiles, snakes, arthropods, spiders, and Hymenoptera (ants and bees). Animals that are vectors of hemorrhagic infectious disease (eg, mosquitos, ticks) were excluded. Our review of the literature indicates that changes to climatic norms will have a potentially dramatic effect on terrestrial venomous creatures. Empirical evidence demonstrates that geographic distributions of many species have already shifted due to changing climatic conditions. Given that most terrestrial venomous species are ectotherms closely tied to ambient temperature, and that climate change is shifting temperature zones away from the equator, further significant distribution and population changes should be anticipated. For those species able to migrate to match the changing temperatures, new geographical locations may open. For those species with limited distribution capabilities, the rate of climate change may accelerate faster than species can adapt, causing population declines. Specifically, poisonous snakes and spiders will likely maintain their population numbers but will shift their geographic distribution to traditionally temperate zones more often inhabited by humans. Fire ants and Africanized honey bees are expected to have an expanded range distribution due to predicted warming trends

  11. XNBR-grafted halloysite nanotube core-shell as a potential compatibilizer for immiscible polymer systems

    Science.gov (United States)

    Paran, S. M. R.; Naderi, G.; Ghoreishy, M. H. R.

    2016-09-01

    Halloysite nanotubes (HNTs) grafted with carboxylated nitrile byutadiene rubber (XNBR) were synthesized via a sol-gel method. The HNTs as an inorganic cores were pre-treated with 3-Glycidoxypropyl trimethoxysilane, then successfully coated with the XNBR as an organic shell. The properties of XNBR-grafted HNTs were characterized by transmission electron microscopy (TEM), Fourier transform infrared spectroscopy (FTIR), attenuated total reflection Fourier transform infrared spectroscopy (ATR-FTIR), X-ray diffraction (XRD) and X-ray photoelectron spectroscopy (XPS). The results suggested that the XNBR grafted to the surfaces of HNTs successfully. Then the TPE nanocomposites based on polyamide-6 (PA6) and nitrile butadiene rubber (NBR) containing various XNBR-grafted and pristine HNTs were prepared via a direct melt mixing method. The morphology, mechanical, dynamic mechanical and rheological properties of the prepared TPE nanocomposites were investigated. The results show that the XNBR-grafted HNTs can effectively improve the morphology and mechanical properties of the PA6/NBR TPEs. The morphology study of the prepared nanocomposites show that the effect of XNBR-grafted HNTs on the size reduction of NBR phase is markedly more effective than the pristine HNTs and rose by 50% in the same concentrations. Mechanical measurements show that the Young's modulus of the TPE nanocomposites rose by 60% in just 7 wt% of XNBR-grafted HNT loading. The results indicate that the introduction of HNT/XNBR core-shells into the PA6/NBR TPEs can enhances the interfacial interactions and provides a more fine rubber phase morphology and controlled mechanical properties in comparison with the accordingly TPE nanocomposites containing pristine HNTs.

  12. EVALUATING THE POTENTIAL OF SATELLITE HYPERSPECTRAL RESURS-P DATA FOR FOREST SPECIES CLASSIFICATION

    Directory of Open Access Journals (Sweden)

    O. Brovkina

    2016-06-01

    Full Text Available Satellite-based hyperspectral sensors provide spectroscopic information in relatively narrow contiguous spectral bands over a large area which can be useful in forestry applications. This study evaluates the potential of satellite hyperspectral Resurs-P data for forest species mapping. Firstly, a comparative study between top of canopy reflectance obtained from the Resurs-P, from the airborne hyperspectral scanner CASI and from field measurement (FieldSpec ASD 4 on selected vegetation cover types is conducted. Secondly, Resurs-P data is tested in classification and verification of different forest species compartments. The results demonstrate that satellite hyperspectral Resurs-P sensor can produce useful informational and show good performance for forest species classification comparable both with forestry map and classification from airborne CASI data, but also indicate that developments in pre-processing steps are still required to improve the mapping level.

  13. Does the Common Core Further Democracy? A Response to "The Common Core and Democratic Education: Examining Potential Costs and Benefits to Public and Private Autonomy"

    Science.gov (United States)

    Neem, Johann N.

    2018-01-01

    The Common Core does not advance democratic education. Far from it, the opening section of the language standards argues that the goal of public K-12 education is "college and career readiness." Only at the end of their introductory section do the Common Core's authors suggest that K-12 education has any goals beyond the economic:…

  14. Towards a spectroscopically accurate set of potentials for heavy hydride laser cooling candidates: Effective core potential calculations of BaH

    Energy Technology Data Exchange (ETDEWEB)

    Moore, Keith; McLaughlin, Brendan M.; Lane, Ian C., E-mail: i.lane@qub.ac.uk [School of Chemistry and Chemical Engineering, Queen’s University Belfast, Stranmillis Road, Belfast BT9 5AG (United Kingdom)

    2016-04-14

    BaH (and its isotopomers) is an attractive molecular candidate for laser cooling to ultracold temperatures and a potential precursor for the production of ultracold gases of hydrogen and deuterium. The theoretical challenge is to simulate the laser cooling cycle as reliably as possible and this paper addresses the generation of a highly accurate ab initio {sup 2}Σ{sup +} potential for such studies. The performance of various basis sets within the multi-reference configuration-interaction (MRCI) approximation with the Davidson correction is tested and taken to the Complete Basis Set (CBS) limit. It is shown that the calculated molecular constants using a 46 electron effective core-potential and even-tempered augmented polarized core-valence basis sets (aug-pCVnZ-PP, n = 4 and 5) but only including three active electrons in the MRCI calculation are in excellent agreement with the available experimental values. The predicted dissociation energy D{sub e} for the X{sup 2}Σ{sup +} state (extrapolated to the CBS limit) is 16 895.12 cm{sup −1} (2.094 eV), which agrees within 0.1% of a revised experimental value of <16 910.6 cm{sup −1}, while the calculated r{sub e} is within 0.03 pm of the experimental result.

  15. Geomechanical testing of MRIG-9 core for the potential SPR siting at the Richton salt dome.

    Energy Technology Data Exchange (ETDEWEB)

    Dunn, Dennis P.; Broome, Scott Thomas; Bronowski, David R.; Bauer, Stephen J.; Hofer, John H.

    2009-02-01

    A laboratory testing program was developed to examine the mechanical behavior of salt from the Richton salt dome. The resulting information is intended for use in design and evaluation of a proposed Strategic Petroleum Reserve storage facility in that dome. Core obtained from the drill hole MRIG-9 was obtained from the Texas Bureau of Economic Geology. Mechanical properties testing included: (1) acoustic velocity wave measurements; (2) indirect tensile strength tests; (3) unconfined compressive strength tests; (4) ambient temperature quasi-static triaxial compression tests to evaluate dilational stress states at confining pressures of 725, 1450, 2175, and 2900 psi; and (5) confined triaxial creep experiments to evaluate the time-dependent behavior of the salt at axial stress differences of 4000 psi, 3500 psi, 3000 psi, 2175 psi and 2000 psi at 55 C and 4000 psi at 35 C, all at a constant confining pressure of 4000 psi. All comments, inferences, discussions of the Richton characterization and analysis are caveated by the small number of tests. Additional core and testing from a deeper well located at the proposed site is planned. The Richton rock salt is generally inhomogeneous as expressed by the density and velocity measurements with depth. In fact, we treated the salt as two populations, one clean and relatively pure (> 98% halite), the other salt with abundant (at times) anhydrite. The density has been related to the insoluble content. The limited mechanical testing completed has allowed us to conclude that the dilatational criteria are distinct for the halite-rich and other salts, and that the dilation criteria are pressure dependent. The indirect tensile strengths and unconfined compressive strengths determined are consistently lower than other coastal domal salts. The steady-state-only creep model being developed suggests that Richton salt is intermediate in creep resistance when compared to other domal and bedded salts. The results of the study provide only

  16. Evaluation of Antifungal Potentials and Antioxidant Capacities of Some Foliose Lichen Species

    Directory of Open Access Journals (Sweden)

    Bahar BİLGİN SÖKMEN

    2018-03-01

    Full Text Available This work is aimed to assess of antioxidant and antifungal potential of the foliose lichen species: Flavoparmelia caperata, Xanthoparmelia stenophylla and Xanthoparmelia conspersa. The antifungal activity of lichens were studied against some pathogenic fungi by disc diffusion method. The acetonitrile extracts of these lichens were obtained with Soxhlet extraction. While F. caperata exhibited maximum antifungal activity (32 mm against the C. albicans, the minimum antifungal activity (10 mm was obtained from X. stenophylla lichen against S. cerevisiae. In CUPRAC assay, absorbance values was in order of BHT>X. conspersa>F. caperata>X. stenophylla. As a result of the study, it was concluded that these lichen species may be a potential source for the development of new antifungal and antioxidant compounds.

  17. Phytoextraction of potentially toxic elements by six tree species growing on hazardous mining sludge.

    Science.gov (United States)

    Mleczek, Mirosław; Goliński, Piotr; Krzesłowska, Magdalena; Gąsecka, Monika; Magdziak, Zuzanna; Rutkowski, Paweł; Budzyńska, Sylwia; Waliszewska, Bogusława; Kozubik, Tomisław; Karolewski, Zbigniew; Niedzielski, Przemysław

    2017-10-01

    The aim of the study was to compare the phytoextraction abilities of six tree species (Acer platanoides L., Acer pseudoplatanus L., Betula pendula Roth, Quercus robur L., Tilia cordata Miller, Ulmus laevis Pall.), cultivated on mining sludge contaminated with arsenic (As), cadmium (Cd), copper (Cu), lead (Pb), thallium (Tl), and zinc (Zn). All six tree species were able to survive on such an unpromising substrate. However, A. platanoides and T. cordata seedlings grown on the polluted substrate showed significantly lower biomass than control plants (55.5 and 45.6%, respectively). As, Cd, Cu, Pb, and Tl predominantly accumulated in the roots of all the analyzed tree species with the following highest contents: 1616, 268, 2432, 547, and 856 mg kg -1 , respectively. Zn was predominantly localized in shoots with the highest content of 5801 and 5732 mg kg -1 for U. laevis and A. platanoides, respectively. A. platanoides was the most effective in Zn phytoextaction, with a bioconcentration factor (BCF) of 8.99 and a translocation factor (TF) of 1.5. Furthermore, with the exception of A. pseudoplatanus, the analyzed tree species showed a BCF > 1 for Tl, with the highest value for A. platanoides (1.41). However, the TF for this metal was lower than 1 in all the analyzed tree species. A. platanoides showed the highest BCF and a low TF and could, therefore, be a promising species for Tl phytostabilization. In the case of the other analyzed tree species, their potential for effective phytoextraction was markedly lower. Further studies on the use of A. platanoides in phytoremediation would be worth conducting.

  18. Mycotoxigenic Potentials of Fusarium Species in Various Culture Matrices Revealed by Mycotoxin Profiling

    Science.gov (United States)

    Shi, Wen; Tan, Yanglan; Wang, Shuangxia; Gardiner, Donald M.; De Saeger, Sarah; Liao, Yucai; Wang, Cheng; Fan, Yingying; Wang, Zhouping; Wu, Aibo

    2016-01-01

    In this study, twenty of the most common Fusarium species were molecularly characterized and inoculated on potato dextrose agar (PDA), rice and maize medium, where thirty three targeted mycotoxins, which might be the secondary metabolites of the identified fungal species, were detected by liquid chromatography–tandem mass spectrometry (LC-MS/MS). Statistical analysis was performed with principal component analysis (PCA) to characterize the mycotoxin profiles for the twenty fungi, suggesting that these fungi species could be discriminated and divided into three groups as follows. Group I, the fusaric acid producers, were defined into two subgroups, namely subgroup I as producers of fusaric acid and fumonisins, comprising of F. proliferatum, F. verticillioides, F. fujikuroi and F. solani, and subgroup II considered to only produce fusaric acid, including F. temperatum, F. subglutinans, F. musae, F. tricinctum, F. oxysporum, F. equiseti, F. sacchari, F. concentricum, F. andiyazi. Group II, as type A trichothecenes producers, included F. langsethiae, F. sporotrichioides, F. polyphialidicum, while Group III were found to mainly produce type B trichothecenes, comprising of F. culmorum, F. poae, F. meridionale and F. graminearum. A comprehensive picture, which presents the mycotoxin-producing patterns by the selected fungal species in various matrices, is obtained for the first time, and thus from an application point of view, provides key information to explore mycotoxigenic potentials of Fusarium species and forecast the Fusarium infestation/mycotoxins contamination. PMID:28035973

  19. ANATOMICAL PROPERTIES AND FIBER QUALITY OF FIVE POTENTIAL COMMERCIAL WOOD SPECIES FROM CIANJUR, WEST JAVA

    Directory of Open Access Journals (Sweden)

    Ratih Damayanti

    2010-06-01

    Full Text Available A detailed description of wood anatomy is essential for assessing the use of a wood species for processing , and also beneficial for the identification of wood samples. Computerized keys are available that allow the identification of wood samples until the genus level; however, it is not easy to use these keys to identif y unknown species. Therefore, a database of anatomical characteristics and the computerized keys need to be completed up to species level. As the relevance, this study has examined the wood anatomical properties of the five corresponding tree species originated from Cianjur, West Java, which are commercially potential for their exploitation, i.e Castanopsis acuminatissima ADC. (Fagaceae; Castanopsistungurrut ADC. (Fagaceae; Cinnamomum inners Reinw. ex Blume (Lauraceae; Ficus nervosa Heyne (Moraceae and Horsfieldia glabra Warb. (Myristicaceae. Expectedly the results would be beneficial for wood identification purposes and evaluation for other possible uses. Obser vations on anatomical structures covered macroscopic and microscopic characteristics were carried out through the sectioned and macerated wood samples. The obser ved characteristics of the anatomical features were defined conforming to the IAWA List of Microscopic Features for Hardwood  Identification.  Based on the scrutiny on those obser ved characteristics and linked to the fiber quality, it was judged that the fiber in all the five wood species could be classified as class I for pulp and paper processing.

  20. Metabolomics Analysis Reveals Specific Novel Tetrapeptide and Potential Anti-Inflammatory Metabolites in Pathogenic Aspergillus species.

    Science.gov (United States)

    Lee, Kim-Chung; Tam, Emily W T; Lo, Ka-Ching; Tsang, Alan K L; Lau, Candy C Y; To, Kelvin K W; Chan, Jasper F W; Lam, Ching-Wan; Yuen, Kwok-Yung; Lau, Susanna K P; Woo, Patrick C Y

    2015-06-17

    Infections related to Aspergillus species have emerged to become an important focus in infectious diseases, as a result of the increasing use of immunosuppressive agents and high fatality associated with invasive aspergillosis. However, laboratory diagnosis of Aspergillus infections remains difficult. In this study, by comparing the metabolomic profiles of the culture supernatants of 30 strains of six pathogenic Aspergillus species (A. fumigatus, A. flavus, A. niger, A. terreus, A. nomius and A. tamarii) and 31 strains of 10 non-Aspergillus fungi, eight compounds present in all strains of the six Aspergillus species but not in any strain of the non-Aspergillus fungi were observed. One of the eight compounds, Leu-Glu-Leu-Glu, is a novel tetrapeptide and represents the first linear tetrapeptide observed in Aspergillus species, which we propose to be named aspergitide. Two other closely related Aspergillus-specific compounds, hydroxy-(sulfooxy)benzoic acid and (sulfooxy)benzoic acid, may possess anti-inflammatory properties, as 2-(sulfooxy)benzoic acid possesses a structure similar to those of aspirin [2-(acetoxy)benzoic acid] and salicylic acid (2-hydroxybenzoic acid). Further studies to examine the potentials of these Aspergillus-specific compounds for laboratory diagnosis of aspergillosis are warranted and further experiments will reveal whether Leu-Glu-Leu-Glu, hydroxy-(sulfooxy)benzoic acid and (sulfooxy)benzoic acid are virulent factors of the pathogenic Aspergillus species.

  1. Natural Fiber Reinforced Composites: A Review on Potential for Corrugated Core of Sandwich Structures

    Directory of Open Access Journals (Sweden)

    Jusoh A.F.

    2016-01-01

    Full Text Available Natural fibers, characterized by sustainability, have gained a considerable attention in recent years, due to their advantages of environmental acceptability and commercial viability. In this paper, the characterization of natural fibers including the mechanical properties and alkalization of fibers is presented. Most recent study had gone through the mercerization process to improve the toughness of natural fibers; which is a well-known hydrophilic material. Traditional reinforcement method was commonly used to fabricate a natural fiber composite such as hand lay-up and mold press due to its convenience in terms of time and cost. Also, different kind of matrix material used in different kind of natural fibers gave high impact on the tensile and flexural test result. By selecting appropriate chemical treatment, matrix material and fabrication method, the tensile and flexural test gives different results and findings. As most researchers tend to use metals to create corrugated cores for sandwich structure, it is possible to develop this structure using natural fibers such as kenaf, wood dust, and other natural fibers.

  2. Accurate core ionization potentials and photoelectron kinetic energies for light elements

    Energy Technology Data Exchange (ETDEWEB)

    Thomas, T D [Oregon State Univ., Corvallis; Shaw, Jr, R W

    1974-01-01

    By electron spectroscopy accurate values have been determined for the neon 1s ionization potential (870.312 +- .017 eV) and the neon Auger (/sup 1/D/sub 2/) kinetic energy (804.557 +- .017 eV). Using these together with the neon 2s ionization potential for calibration, 1s ionization potentials have been determined for CF/sub 4/ (C = 301.96, F = 695.57), CO/sub 2/ (C = 297.71, O = 541.32), N/sub 2/ (N = 409.93) and ionization potentials for Ar (2s = 326.37, 2p/sub /sup 3///sub 2// = 248.60, 2p/sub /sup 1///sub 2// = 250.70). These are known with an accuracy of 0.05 eV. The results are in good agreement with those of other measurements but have significantly smaller uncertainties. Comparison is made between experimental and theoretical ionization potentials. The value for neon is quite close to a recently reported theoretical value of 870.0 eV. The relativistic corrections for a cylindrical mirror analyzer, which are much smaller at low energies than would be expected from an approximate formula, are discussed.

  3. Seroepidemiologic Survey of Potential Pathogens in Obligate and Facultative Scavenging Avian Species in California

    Science.gov (United States)

    Straub, Mary H.; Kelly, Terra R.; Rideout, Bruce A.; Eng, Curtis; Wynne, Janna; Braun, Josephine; Johnson, Christine K.

    2015-01-01

    Throughout the world, populations of scavenger birds are declining rapidly with some populations already on the brink of extinction. Much of the current research into the factors contributing to these declines has focused on exposure to drug residues, lead, and other toxins. Despite increased monitoring of these declining populations, little is known about infectious diseases affecting scavenger bird species. To assess potential infectious disease risks to both obligate and facultative scavenger bird species, we performed a serosurvey for eleven potential pathogens in three species of scavenging birds in California: the California condor (Gymnogyps californianus), turkey vulture (Cathartes aura) and golden eagle (Aquila chrysaetos). California condors were seropositive for avian adenovirus, infectious bronchitis virus, Mycoplasma gallisepticum, avian paramyxovirus-2, West Nile virus (WNV) and Toxoplasma gondii. Golden eagles were seropositive for avian adenovirus, Chlamydophila psittaci and Toxoplasma gondii, and turkey vultures were seropositive for avian adenovirus, Chlamydophila psittaci, avian paramyxovirus-1, Toxoplasma gondii and WNV. Risk factor analyses indicated that rearing site and original release location were significantly associated with a positive serologic titer to WNV among free-flying condors. This study provides preliminary baseline data on infectious disease exposure in these populations for aiding in early disease detection and provides potentially critical information for conservation of the endangered California condor as it continues to expand its range and encounter new infectious disease threats. PMID:26606755

  4. Electron structure of molecules with very heavy atoms using effective core potentials

    International Nuclear Information System (INIS)

    Pitzer, K.S.

    1982-01-01

    Topics covered include effective potential, Hamiltonian for valence-electron motion, molecular calculations, spin-spin coupling, L-S coupling, numerical results of molecular calculations, and results of configuration-interaction Slater-orbital calculations in L-S coupling

  5. Molecular lipid species in urinary exosomes as potential prostate cancer biomarkers.

    Science.gov (United States)

    Skotland, Tore; Ekroos, Kim; Kauhanen, Dimple; Simolin, Helena; Seierstad, Therese; Berge, Viktor; Sandvig, Kirsten; Llorente, Alicia

    2017-01-01

    Exosomes have recently appeared as a novel source of noninvasive cancer biomarkers, since these nanovesicles contain molecules from cancer cells and can be detected in biofluids. We have here investigated the potential use of lipids in urinary exosomes as prostate cancer biomarkers. A high-throughput mass spectrometry quantitative lipidomic analysis was performed to reveal the lipid composition of urinary exosomes in prostate cancer patients and healthy controls. Control samples were first analysed to characterise the lipidome of urinary exosomes and test the reproducibility of the method. In total, 107 lipid species were quantified in urinary exosomes. Several differences, for example, in cholesterol and phosphatidylcholine, were found between urinary exosomes and exosomes derived from cell lines, thus showing the importance of in vivo studies for biomarker analysis. The 36 most abundant lipid species in urinary exosomes were then quantified in 15 prostate cancer patients and 13 healthy controls. Interestingly, the levels of nine lipids species were found to be significantly different when the two groups were compared. The highest significance was shown for phosphatidylserine (PS) 18:1/18:1 and lactosylceramide (d18:1/16:0), the latter also showed the highest patient-to-control ratio. Furthermore, combinations of these lipid species and PS 18:0-18:2 distinguished the two groups with 93% sensitivity and 100% specificity. Finally, in agreement with the reported dysregulation of sphingolipid metabolism in cancer cells, alteration in specific sphingolipid lipid classes were observed. This study shows for the first time the potential use of exosomal lipid species in urine as prostate cancer biomarkers. Copyright © 2016 Elsevier Ltd. All rights reserved.

  6. A comparison of measured radionuclide release rates from Three Mile Island Unit-2 core debris for different oxygen chemical potentials

    International Nuclear Information System (INIS)

    Baston, V.F.; Hofstetter, K.J.; Ryan, R.F.

    1987-01-01

    Chemical and radiochemical analyses of reactor coolant samples taken during defueling of the Three Mile Island Unit-2 (TMI-2) reactor provide relevant data to assist in understanding the solution chemistry of the radionuclides retained within the TMI-2 reactor coolant system. Hydrogen peroxide was added to various plant systems to provide disinfection for microbial contamination and has provided the opportunity to observe radionuclide release under different oxygen chemical potentials. A comparison of the radionuclide release rates with and without hydrogen peroxide has been made for these separate but related cases, i.e., the fuel transfer canal and connecting spent-fuel pool A with the TMI-2 reactor plenum in the fuel transfer canal, core debris grab sample laboratory experiments, and the reactor vessel fluid and associated core debris. Correlation and comparison of these data indicate a physical parameter dependence (surface-to-volume ratio) affecting all radionuclide release; however, selected radionuclides also demonstrate a chemical dependence release under the different oxygen chemical potentials. Chemical and radiochemical analyses of reactor coolant samples taken during defueling of the Three Mile Island Unit-2 (TMI-2) reactor provide relevant data to assist in understanding the solution chemistry of the radionuclides retained within the TMI-2 reactor coolant system

  7. Pathogenic potentials of Aeromonas species isolated from aquaculture and abattoir environments.

    Science.gov (United States)

    Igbinosa, Isoken H; Beshiru, Abeni; Odjadjare, Emmanuel E; Ateba, Collins N; Igbinosa, Etinosa O

    2017-06-01

    The present study elucidated the presence of antibiotics resistance, virulence genes and biofilm potentials among Aeromonas species isolated from abattoir and aquaculture environments in Benin City, Nigeria. A total of 144 wastewater samples were obtained from two independent aquaculture and abattoir environments between May and October 2016. Aeromonas species were isolated on Glutamate Starch Phenol Red (GSP) agar and confirmed using API 20NE kits. Antimicrobial susceptibility profile of the isolates was carried out using standard disc diffusion assay while biofilm potentials were detected by the microtitre plate method and PCR technique was used to detect antibiotics resistance and virulence gene markers. Overall, 32 and 26 Aeromonas species were isolated from the abattoir and aquaculture environments respectively. Isolates from both environments were completely resistant (100%) to penicillin G, ertapenem and tetracycline; whereas aquaculture isolates exhibited absolute sensitivity (100%) towards cefepime. All the virulence gene markers (aerA, hlyA, alt, ast, laf, ascF-G, fla, lip, stx1, and stx2) investigated in this study (except laf) were detected in isolates from both environments. The laf genes were only detected in isolates from abattoir environments. Antibiotics resistant genes including pse, bla TEM and class 1 integron were detected in isolates from both environments. Majority of the isolates (53/58 91.4%) from both environments; demonstrated capacity for biofilm potential. The detection of antibiotic resistance and virulence gene markers as well as biofilm forming ability in Aeromonas species isolated from aquaculture and abattoir environments raise serious public health concern worthy of further investigation. Copyright © 2017 Elsevier Ltd. All rights reserved.

  8. Adaptive genetic potential of coniferous forest tree species under climate change: implications for sustainable forest management

    Science.gov (United States)

    Mihai, Georgeta; Birsan, Marius-Victor; Teodosiu, Maria; Dumitrescu, Alexandru; Daia, Mihai; Mirancea, Ionel; Ivanov, Paula; Alin, Alexandru

    2017-04-01

    Mountain ecosystems are extremely vulnerable to climate change. The real potential for adaptation depends upon the existence of a wide genetic diversity in trees populations, upon the adaptive genetic variation, respectively. Genetic diversity offers the guarantee that forest species can survive, adapt and evolve under the influence of changing environmental conditions. The aim of this study is to evaluate the genetic diversity and adaptive genetic potential of two local species - Norway spruce and European silver fir - in the context of regional climate change. Based on data from a long-term provenance experiments network and climate variables spanning over more than 50 years, we have investigated the impact of climatic factors on growth performance and adaptation of tree species. Our results indicate that climatic and geographic factors significantly affect forest site productivity. Mean annual temperature and annual precipitation amount were found to be statistically significant explanatory variables. Combining the additive genetic model with the analysis of nuclear markers we obtained different images of the genetic structure of tree populations. As genetic indicators we used: gene frequencies, genetic diversity, genetic differentiation, genetic variance, plasticity. Spatial genetic analyses have allowed identifying the genetic centers holding high genetic diversity which will be valuable sources of gene able to buffer the negative effects of future climate change. Correlations between the marginal populations and in the optimal vegetation, between the level of genetic diversity and ecosystem stability, will allow the assessment of future risks arising from current genetic structure. Therefore, the strategies for sustainable forest management have to rely on the adaptive genetic variation and local adaptation of the valuable genetic resources. This work was realized within the framework of the project GENCLIM (Evaluating the adaptive potential of the main

  9. Skin microbiota in frogs from the Brazilian Atlantic Forest: Species, forest type, and potential against pathogens.

    Science.gov (United States)

    Assis, Ananda Brito de; Barreto, Cristine Chaves; Navas, Carlos Arturo

    2017-01-01

    The cutaneous microbiota of amphibians can be defined as a biological component of protection, since it can be composed of bacteria that produce antimicrobial compounds. Several factors influence skin microbial structure and it is possible that environmental variations are among one of these factors, perhaps through physical-chemical variations in the skin. This community, therefore, is likely modified in habitats in which some ecophysiological parameters are altered, as in fragmented forests. Our research goal was to compare the skin bacterial community of four anuran species of the Atlantic Forest of Brazil in landscapes from two different environments: continuous forest and fragmented forest. The guiding hypotheses were: 1) microbial communities of anuran skin vary among sympatric frog species of the Atlantic forest; 2) the degree to which forested areas are intact affects the cutaneous bacterial community of amphibians. If the external environment influences the skin microbiota, and if such influences affect microorganisms capable of inhibiting the colonization of pathogens, we expect consequences for the protection of host individuals. We compared bacterial communities based on richness and density of colony forming units; investigated the antimicrobial potential of isolated strains; and did the taxonomic identification of isolated morphotypes. We collected 188 individual frogs belonging to the species Proceratophrys boiei, Dendropsophus minutus, Aplastodiscus leucopygius and Phyllomedusa distincta, and isolated 221 bacterial morphotypes. Our results demonstrate variation in the skin microbiota of sympatric amphibians, but only one frog species exhibited differences in the bacterial communities between populations from fragmented and continuous forest. Therefore, the variation we observed is probably derived from both intrinsic aspects of the host amphibian species and extrinsic aspects of the environment occupied by the host. Finally, we detected

  10. Growth potential of alternative eucalyptus species for mid and high altitude sites in the summer rainfall region in South Africa

    CSIR Research Space (South Africa)

    Komakech Otim, C

    2008-12-01

    Full Text Available to evaluate the growth potential of the unimproved Australian species and the improved commercial controls incorporated into the trials. Volume production and basal area growth were assessed for the three species at all sites. However, only three sub species E...

  11. Precursors to potential severe core damage accidents: 1992, a status report

    International Nuclear Information System (INIS)

    1993-12-01

    This document is part of a report which documents 1992 operational events selected as accident sequence precursors. This report describes the 27 precursors identified from the 1992 licensee event reports. It also describe containment-related events; open-quote interesting close-quote events; potentially significant events that were considered impractical to analyze; copies of the licensee event reports which were cited in the cases above; and comments from the licensee and NRC in response to the preliminary reports

  12. Animal herpesviruses and their zoonotic potential for cross-species infection

    Directory of Open Access Journals (Sweden)

    Grzegorz Woźniakowski

    2015-05-01

    Full Text Available Herpesviruses of humans and animals cause severe diseases that influence not only the health and epidemiological status but are also economically important in the context of food production. The members of Herpesviridae are host specific agents that also share many properties that potentially make them capable of crossing the species barriers. The objective of presented review paper was to summarize the relationship between herpesviruses of animals and humans and their zoonotic potential. In humans, the most epidemiologically important herpesviruses are represented by Human herepesvirus-1 and Human herpesvirus-2, which are commonly known as herpes simplex virus type 1 and 2, varicella-zooster virus (VZV, Epstein-Barr virus (EBV, Kaposi’s Sarcoma-associated herpesvirus (KSHV, cytomegalovirus (CMV, as well as Human herpesviruses: HHV-6A, HHV-6B, and HHV-7. However, in terms of the potential to cross the species barrier, there are a few herpesviruses, including B virus disease (CeHV-1, Marek’s disease virus (MDV, Equid herpesvirus-1 (EHV-1 or pseudorabies virus (PRV, which are potentially able to infect different hosts. To summarize, in advantageous conditions the host specific herpesviruses may pose a threat for public health but also may exert a negative impact on the economical aspects of animal production. The most probable of these are zoonotic infections caused by B virus disease; however, close contact between infected animal hosts and humans may lead to transmission and replication of other Herpesviridae members.

  13. Lipase From Thermoalkalophilic Pseudomonas species as an Additive in Potential Laundry Detergent Formulations

    Directory of Open Access Journals (Sweden)

    Ibrahim, C. O.

    2009-01-01

    Full Text Available Lipase isolated from a thermoalkalophilic Pseudomonas species was used as additive to improve the degree of olive oil removal from cotton fabric in the presence of surfactants. The lipase used in this study was found to be more effective with non ionic surfactants as compared to ionic surfactants. In terms of stability, there was no decrease in activity found in the presence of Tween 85, Span 80 and Span 20. Lipase from Pseudomonas species was most active in the presence of Tween 85, Span 80 and Span 20. The application of lipase from Pseudomonas species as an additive in the formulation containing Span 80 has improved oil removal by 36% using the washing system consisting 5 U/mL lipase, at 70 °C for 20 min and 0.8% of Span 80 as surfactant. Considering that lipase from Pseudomonas species is stable in high pH and temperatures in the presence of various surfactants, therefore it is suitable to be incorporated as additives in potential detergent formulations.

  14. Energy values and estimation of power generation potentials of some non-woody biomass species

    Energy Technology Data Exchange (ETDEWEB)

    Kumar, M; Patel, S K [National Institute of Technology, Rourkela (India)

    2008-07-01

    In view of high energy potentials in non-woody biomass species and an increasing interest in their utilization for power generation, an attempt has been made in this study to assess the proximate analysis and energy content of different components of Ocimum canum and Tridax procumbens biomass species (both non-woody), and their impact on power generation and land requirement for energy plantations. The net energy content in Ocimum canum was found to be slightly higher than that in Tridax procumbens. In spite of having higher ash contents, the barks from both the plant species exhibited higher calorific values. The results have shown that approximately 650 and 1,270 hectares of land are required to generate 20,000 kWh/day electricity from Ocimum canum and Tridax procumbens biomass species. Coal samples, obtained from six different local mines, were also examined for their qualities, and the results were compared with those of studied biomass materials. This comparison reveals much higher power output with negligible emission of suspended particulate matters (SPM) from biomass materials.

  15. Potential climate change favored expansion of a range limited species, Haematostaphis barteri Hook f.

    Directory of Open Access Journals (Sweden)

    Jacob Koundouonon Moutouama

    2016-12-01

    Full Text Available Understanding impact of climate change on range breadth of rare species can improve the ability to anticipate their decline or expension and take appropriate conservation measures. Haematatostaphis barteri is an agroforestry species of the Sudanian centre of endemism in Africa. We investigeted impact of climate change on range of suitable habitats for this species in Benin,using the Maximum Entropy algorithm under R software. Five environmental variables were used with the regional climate model under the new Representation Concentration Pathways (RCP. Moisture Index of the Moist Quarter and Slope variability had the greatest predictive importance for the range of suitable habitats for H. barteri. Its Potential breadth was found to be currently limited to the Atacora Mountain Chain (AMC and covers 0.51% of national territory. Climate change was projected to favor expansion of suitable habitats for H. barteri by 0.12% and 0.05%, respectively for the RCP4.5 and RCP8.5. These habitats were however mostly out of the local protected areas network. Climate change would extend range of habitats for H. barteri. Observed protection gaps suggest need for integrating this species into formal in situ, on-farm or ex situ conservation schemes.

  16. Kaempferitrin from Uncaria guianensis (Rubiaceae) and its potential as a chemical marker for the species

    Energy Technology Data Exchange (ETDEWEB)

    Valente, Ligia M.M.; Liechocki, Sally; Barboza, Rodolfo S.; Paixao, Djavan da [Universidade Federal do Rio de Janeiro (UFRJ), RJ (Brazil). Inst. de Quimica], e-mail: valente@iq.ufrj.br; Bizarri, Carlos H.B.; Almeida, M. Beatriz S.; Benevides, Paulo J.C.; Siani, Antonio C. [Fundacao Oswaldo Cruz (FIOCRUZ), Rio de Janeiro, RJ (Brazil). Inst. de Tecnologia em Farmacos; Magalhaes, Alvicler [Universidade Estadual de Campinas (UNICAMP), SP (Brazil). Inst. de Quimica

    2009-07-01

    Uncaria tomentosa (Willd.) DC. and U. guianensis (Aubl.) Gmel., known as cat's claw, are large woody vines native to the Amazonian and Central American rain forests. The species contain, in different proportions, indole and oxindole alkaloids, triterpenoid glycosides, sterols and proanthocyanidins. U. tomentosa can be chemically identified by its oxindole alkaloid profile and content, whereas U. guianensis has no satisfactorily established chemical markers. This work describes, for the first time, the isolation of kaempferol-3,7-O-(a)-dirhamnoside (kaempferitrin) in Uncaria species. Screening for this compound in leaves, stems or bark of both species through TLC and HPLC-DAD-MS showed the presence of kaempferitrin only in the leaves and stems of U. guianensis, at a ratio almost thirty six times greater in the leaves than in the stems. These results reveal the selectivity of U. guianensis to produce this bioactive flavonoid glycoside, and suggest this compound as a potential chemical marker for the species.(author)

  17. Pictorial identification key for species of Sarcophagidae (Diptera of potential forensic importance in southern Brazil

    Directory of Open Access Journals (Sweden)

    Karine Pinto e Vairo

    2011-09-01

    Full Text Available Pictorial identification key for species of Sarcophagidae (Diptera of potential forensic importance in southern Brazil. Species of the subfamily Sarcophaginae are important to forensic entomology due to their necrophagous habits. This contribution presents a pictorial key for the identification of 22 Sarcophaginae species in 10 genera that are commonly found in southern Brazil. Photographs of the main structures used in species identification, mainly from the male terminalia, are provided.Chave pictórica para a identificação das espécies de Sarcophagidae (Diptera de potencial importância forense do sul do Brasil. Espécies da subfamília Sarcophaginae são importantes para a entomologia forense devido ao seu hábito necrófago. Este trabalho apresenta uma chave pictórica para a identificação de 22 espécies de Sarcophaginae de 10 gêneros encontradas na região sul do Brasil. São fornecidas fotografias dos principais estruturas das espécies, principalmente da terminália masculina.

  18. Investigation of potential targets of Porphyromonas CRISPRs among the genomes of Porphyromonas species.

    Science.gov (United States)

    Watanabe, Takayasu; Shibasaki, Masaki; Maruyama, Fumito; Sekizaki, Tsutomu; Nakagawa, Ichiro

    2017-01-01

    The oral bacterial species Porphyromonas gingivalis, a periodontal pathogen, has plastic genomes that may be driven by homologous recombination with exogenous deoxyribonucleic acid (DNA) that is incorporated by natural transformation and conjugation. However, bacteriophages and plasmids, both of which are main resources of exogenous DNA, do not exist in the known P. gingivalis genomes. This could be associated with an adaptive immunity system conferred by clustered regularly interspaced short palindromic repeat (CRISPR) and CRISPR-associated (cas) genes in P. gingivalis as well as innate immune systems such as a restriction-modification system. In a previous study, few immune targets were predicted for P. gingivalis CRISPR/Cas. In this paper, we analyzed 51 P. gingivalis genomes, which were newly sequenced, and publicly available genomes of 13 P. gingivalis and 46 other Porphyromonas species. We detected 6 CRISPR/Cas types (classified by sequence similarity of repeat) in P. gingivalis and 12 other types in the remaining species. The Porphyromonas CRISPR spacers with potential targets in the genus Porphyromonas were approximately 23 times more abundant than those with potential targets in other genus taxa (1,720/6,896 spacers vs. 74/6,896 spacers). Porphyromonas CRISPR/Cas may be involved in genome plasticity by exhibiting selective interference against intra- and interspecies nucleic acids.

  19. The Black Aspergillus Species of Maize and Peanuts and Their Potential for Mycotoxin Production

    Science.gov (United States)

    Palencia, Edwin R.; Hinton, Dorothy M.; Bacon, Charles W.

    2010-01-01

    The black spored fungi of the subgenera Circumdata, the section Nigri (=Aspergillus niger group) is reviewed relative to their production of mycotoxins and their effects on plants as pathogens. Molecular methods have revealed more than 18 cryptic species, of which several have been characterized as potential mycotoxin producers. Others are defined as benign relative to their ability to produce mycotoxins. However, these characterizations are based on in vitro culture and toxins production. Several can produce the ochratoxins that are toxic to livestock, poultry, and humans. The black aspergilli produce rots of grapes, maize, and numerous other fruits and grain and they are generally viewed as post-harvest pathogens. Data are review to suggest that black aspergilli, as so many others, are symptomless endophytes. These fungi and their mycotoxins contaminate several major grains, foodstuffs, and products made from them such as wine, and coffee. Evidence is presented that the black aspergilli are producers of other classes of mycotoxins such as the fumonisins, which are known carcinogenic and known prior investigations as being produced by the Fusarium species. Three species are identified in U.S. maize and peanuts as symptomless endophytes, which suggests the potential for concern as pathogens and as food safety hazards. PMID:22069592

  20. Assessment of potential indigenous plant species for the phytoremediation of arsenic-contaminated areas of Bangladesh.

    Science.gov (United States)

    Mahmud, Rezwanul; Inoue, Naoto; Kasajima, Shin-Ya; Shaheen, Riffat

    2008-01-01

    Soil and water contaminated with arsenic (As) pose a major environmental and human health problem in Bangladesh. Phytoremediation, a plant-based technology, may provide an economically viable solution for remediating the As-polluted sites. The use of indigenous plants with a high tolerance and accumulation capacity for As may be a very convenient approach for phytoremediation. To assess the potential of native plant species for phytoremediation, plant and soil samples were collected from four As-contaminated (groundwater) districts in Bangladesh. The main criteria used for selecting plants for phytoremediation were high bioconcentration factors (BCFs) and translocation factors (TFs) of As. From the results of a screening of 49 plant species belonging to 29 families, only one species of fern (Dryopteris filix-mas), three herbs (Blumea lacera, Mikania cordata, and Ageratum conyzoides), and two shrubs (Clerodendrum trichotomum and Ricinus communis) were found to be suitable for phytoremediation. Arsenic bioconcentration and translocation factors > 1 suggest that these plants are As-tolerant accumulators with potential use in phytoextraction. Three floating plants (Eichhornia crassipes, Spirodela polyrhiza, and Azolla pinnata) and a common wetland weed (Monochoria vaginalis) also showed high BCF and TF values; therefore, these plants may be promising candidates for cleaningup As-contaminated surface water and wetland areas. The BCF of Oryza sativa, obtained from As-contaminated districts was > 1, which highlights possible food-chain transfer issues for As-contaminated areas in Bangladesh.

  1. Phytotoxic potential of celtis australis L. (family ulmaceae) against four crop species

    International Nuclear Information System (INIS)

    Ahmad, I.; Hussain, F.

    2014-01-01

    Bioassays were conducted to test the phytotoxic potential of Celtis australis against Trifolium alexandrinum, Brassica campestris, Triticum aestivum and Lactuca sativa under laboratory condition. Aqueous extracts from twigs and leaves were obtained by soaking 5 and 10g plant material in 100 ml distilled water for 24 and 48hr durations. Aqueous extracts significantly delayed/retarded the germination and reduced the plumule and radicle growth of all the four test species. Generally, extracts soaked for 48h especially 10 gm/100ml were inhibitory than 24h extracts of 5 or 10gm material. Extracts from twigs were inhibitory to germination of wheat while same extracts inhibited the plumule growth of B. campestris. Radicle growth of T. alexandrinum was inhibited more by twig extracts. Hot water extracts from twigs were less inhibitory than leaf extracts. Litter and mulch also significantly delayed the seed germination and retarded the overall growth of seedlings of all test species. The number and length of seminal roots of T. aestivum was suppressed by all aqueous extracts, added litter and mulch. The inhibitory response depended upon the test species, concentration, soaking duration and physiological parameters. The results suggested that Celtis australis has strong phytotoxic potential. (author)

  2. Leaf gas exchange performance and the lethal water potential of five European species during drought.

    Science.gov (United States)

    Li, Shan; Feifel, Marion; Karimi, Zohreh; Schuldt, Bernhard; Choat, Brendan; Jansen, Steven

    2016-02-01

    Establishing physiological thresholds to drought-induced mortality in a range of plant species is crucial in understanding how plants respond to severe drought. Here, five common European tree species were selected (Acer campestre L., Acer pseudoplatanus L., Carpinus betulus L., Corylus avellana L. and Fraxinus excelsior L.) to study their hydraulic thresholds to mortality. Photosynthetic parameters during desiccation and the recovery of leaf gas exchange after rewatering were measured. Stem vulnerability curves and leaf pressure-volume curves were investigated to understand the hydraulic coordination of stem and leaf tissue traits. Stem and root samples from well-watered and severely drought-stressed plants of two species were observed using transmission electron microscopy to visualize mortality of cambial cells. The lethal water potential (ψlethal) correlated with stem P99 (i.e., the xylem water potential at 99% loss of hydraulic conductivity, PLC). However, several plants that were stressed beyond the water potential at 100% PLC showed complete recovery during the next spring, which suggests that the ψlethal values were underestimated. Moreover, we observed a 1 : 1 relationship between the xylem water potential at the onset of embolism and stomatal closure, confirming hydraulic coordination between leaf and stem tissues. Finally, ultrastructural changes in the cytoplasm of cambium tissue and mortality of cambial cells are proposed to provide an alternative approach to investigate the point of no return associated with plant death. © The Author 2015. Published by Oxford University Press. All rights reserved. For Permissions, please email: journals.permissions@oup.com.

  3. Potential arsenic exposures in 25 species of zoo animals living in CCA-wood enclosures

    International Nuclear Information System (INIS)

    Gress, J.; Silva, E.B. da; Oliveira, L.M. de; Zhao, Di; Anderson, G.; Heard, D.; Stuchal, L.D.; Ma, L.Q.

    2016-01-01

    Animal enclosures are often constructed from wood treated with the pesticide chromated copper arsenate (CCA), which leaches arsenic (As) into adjacent soil during normal weathering. This study evaluated potential pathways of As exposure in 25 species of zoo animals living in CCA-wood enclosures. We analyzed As speciation in complete animal foods, dislodgeable As from CCA-wood, and As levels in enclosure soils, as well as As levels in biomarkers of 9 species of crocodilians (eggs), 4 species of birds (feathers), 1 primate species (hair), and 1 porcupine species (quills). Elevated soil As in samples from 17 enclosures was observed at 1.0–110 mg/kg, and enclosures housing threatened and endangered species had As levels higher than USEPA's risk-based Eco-SSL for birds and mammals of 43 and 46 mg/kg. Wipe samples of CCA-wood on which primates sit had dislodgeable As residues of 4.6–111 μg/100 cm 2 , typical of unsealed CCA-wood. Inorganic As doses from animal foods were estimated at 0.22–7.8 μg/kg bw/d. Some As levels in bird feathers and crocodilian eggs were higher than prior studies on wild species. However, hair from marmosets had 6.37 mg/kg As, 30-fold greater than the reference value, possibly due to their inability to methylate inorganic As. Our data suggested that elevated As in soils and dislodgeable As from CCA-wood could be important sources of As exposure for zoo animals. - Highlights: • Daily inorganic As dose from zoo animal foods was 0.22–7.8 μg/kg bw/day. • Total As concentrations in soils of zoo animal enclosures were 1.0–110 mg/kg. • Endangered zoo animals live in soils with As above USEPA Eco-SSLs for avian and mammal species. • Dislodgeable As on CCA-wood beams where primates sit was 4.6–111 μg/100 cm 2 . • Marmoset hair had 6.37 mg/kg As compared to a reference value of 0.21 mg/kg.

  4. Potential arsenic exposures in 25 species of zoo animals living in CCA-wood enclosures

    Energy Technology Data Exchange (ETDEWEB)

    Gress, J. [State Key Laboratory of Pollution Control and Resource Reuse, School of the Environment, Nanjing University, Jiangsu 201146 (China); Soil and Water Science Department, University of Florida, Gainesville, FL 32611 (United States); Silva, E.B. da; Oliveira, L.M. de [Soil and Water Science Department, University of Florida, Gainesville, FL 32611 (United States); Zhao, Di [State Key Laboratory of Pollution Control and Resource Reuse, School of the Environment, Nanjing University, Jiangsu 201146 (China); Anderson, G. [Virginia Polytechnic Institute and State University, Blacksburg, VA 24061 (United States); Heard, D. [Department of Small Animal Clinical Sciences, University of Florida, Gainesville, FL 32610 (United States); Stuchal, L.D. [Center for Environmental and Human Toxicology, University of Florida, Gainesville, FL 32611 (United States); Department of Environmental and Global Health, College of Public Health and Health Professions, University of Florida, Gainesville, FL 32611 (United States); Ma, L.Q., E-mail: lqma@ufl.edu [State Key Laboratory of Pollution Control and Resource Reuse, School of the Environment, Nanjing University, Jiangsu 201146 (China); Soil and Water Science Department, University of Florida, Gainesville, FL 32611 (United States)

    2016-05-01

    Animal enclosures are often constructed from wood treated with the pesticide chromated copper arsenate (CCA), which leaches arsenic (As) into adjacent soil during normal weathering. This study evaluated potential pathways of As exposure in 25 species of zoo animals living in CCA-wood enclosures. We analyzed As speciation in complete animal foods, dislodgeable As from CCA-wood, and As levels in enclosure soils, as well as As levels in biomarkers of 9 species of crocodilians (eggs), 4 species of birds (feathers), 1 primate species (hair), and 1 porcupine species (quills). Elevated soil As in samples from 17 enclosures was observed at 1.0–110 mg/kg, and enclosures housing threatened and endangered species had As levels higher than USEPA's risk-based Eco-SSL for birds and mammals of 43 and 46 mg/kg. Wipe samples of CCA-wood on which primates sit had dislodgeable As residues of 4.6–111 μg/100 cm{sup 2}, typical of unsealed CCA-wood. Inorganic As doses from animal foods were estimated at 0.22–7.8 μg/kg bw/d. Some As levels in bird feathers and crocodilian eggs were higher than prior studies on wild species. However, hair from marmosets had 6.37 mg/kg As, 30-fold greater than the reference value, possibly due to their inability to methylate inorganic As. Our data suggested that elevated As in soils and dislodgeable As from CCA-wood could be important sources of As exposure for zoo animals. - Highlights: • Daily inorganic As dose from zoo animal foods was 0.22–7.8 μg/kg bw/day. • Total As concentrations in soils of zoo animal enclosures were 1.0–110 mg/kg. • Endangered zoo animals live in soils with As above USEPA Eco-SSLs for avian and mammal species. • Dislodgeable As on CCA-wood beams where primates sit was 4.6–111 μg/100 cm{sup 2}. • Marmoset hair had 6.37 mg/kg As compared to a reference value of 0.21 mg/kg.

  5. Potential of Trichoderma species on Helminthosporium causing leaf spot on cane palm, Chrysalidocarpus lutescens.

    Science.gov (United States)

    Jegathambigai, V; Karunaratne, M D S D; Svinningen, A; Mikunthan, G

    2008-01-01

    The cane palm, Chrysalidocarpus lutescens is one among the plant material of the export industries in Sri Lanka. The export quality of C. lutescens was declined due to the repeated occurrence of a leaf spot caused by Helminthosporium. Widespread occurrence of the leaf spot affected the cane palm production and succumb it to a huge setback in the floriculture industry in Sri Lanka. Being an export industry eco-friendly means of disease control was the prime focus for a better management of such vulnerable disease. Trichoderma is a potential bio agent, which has definite role in suppressing the inoculum of Helminthosporium sp. This study aims to evaluate the efficacy of Trichoderma species to control naturally established leaf spot in cane palm under field conditions. Three isolates of T. viride and two isolates of T. harzianum were evaluated. All the Trichoderma species performed significantly in reducing the disease incidence. T. viride + T. harzianum combination (1 x 10(10) cfu/ml) was the best compared to chemical in decreasing the mean disease severity index and improving the frequency of healthy plants. The colour of the leaves regained due to the application of Trichoderma sp. The results revealed that leaf spot incidence was lowered significantly in cane palms treated with Trichoderma species followed by treatment with combination of Trichoderma sp. and fungicides. The fungicide mixture (hexaconozole 50 g/l + Isoprothiolane 400 g/l) failed to lower the disease incidence and had no effect in suppressing the inocula of Helminthosporium, although recommended. Mixing of Trichoderma species with fungicide did not exhibit any additive effect. The combination of different species of Trichoderma would target species of Helminthosporium that exist as a complex group under field conditions. The results also proved that the existence of heterogeneity in Helminthosporium that could be tackled and effectively controlled by a combination of different species of the bio

  6. Twinflower (Linnaea borealis L. – plant species of potential medicinal properties

    Directory of Open Access Journals (Sweden)

    Thiem Barbara

    2017-09-01

    Full Text Available Twinflower (Linnaea borealis L. is a widespread circumboreal plant species belonging to Linnaeaceae family (previously Caprifoliaceae. L. borealis commonly grows in taiga and tundra. In some countries in Europe, including Poland, twinflower is protected as a glacial relict. Chemical composition of this species is not well known, however in folk medicine of Scandinavian countries, L. borealis has a long tradition as a cure for skin diseases and rheumatism. It is suggested that twinflower has potential medicinal properties. The new study on lead secondary metabolites responsible for biological activity are necessary. This short review summarizes very sparse knowledge on twinflower: its biology, distribution, conservation status, chemical constituents, and describes the role of this plant in folk tradition of Scandinavian countries.

  7. Modeling the potential area of occupancy at fine resolution may reduce uncertainty in species range estimates

    DEFF Research Database (Denmark)

    Jiménez-Alfaro, Borja; Draper, David; Nogues, David Bravo

    2012-01-01

    and maximum entropy modeling to assess whether different sampling (expert versus systematic surveys) may affect AOO estimates based on habitat suitability maps, and the differences between such measurements and traditional coarse-grid methods. Fine-scale models performed robustly and were not influenced...... by survey protocols, providing similar habitat suitability outputs with high spatial agreement. Model-based estimates of potential AOO were significantly smaller than AOO measures obtained from coarse-scale grids, even if the first were obtained from conservative thresholds based on the Minimal Predicted...... permit comparable measures among species. We conclude that estimates of AOO based on fine-resolution distribution models are more robust tools for risk assessment than traditional systems, allowing a better understanding of species ranges at habitat level....

  8. Mining microsatellites in the peach genome: development of new long-core SSR markers for genetic analyses in five Prunus species.

    Science.gov (United States)

    Dettori, Maria Teresa; Micali, Sabrina; Giovinazzi, Jessica; Scalabrin, Simone; Verde, Ignazio; Cipriani, Guido

    2015-01-01

    A wide inventory of molecular markers is nowadays available for individual fingerprinting. Microsatellites, or simple sequence repeats (SSRs), play a relevant role due to their relatively ease of use, their abundance in the plant genomes, and their co-dominant nature, together with the availability of primer sequences in many important agricultural crops. Microsatellites with long-core motifs are more easily scored and were adopted long ago in human genetics but they were developed only in few crops, and Prunus species are not among them. In the present work the peach whole-genome sequence was used to select 216 SSRs containing long-core motifs with tri-, tetra- and penta-nucleotide repeats. Microsatellite primer pairs were designed and tested for polymorphism in the five diploid Prunus species of economic relevance (almond, apricot, Japanese plum, peach and sweet cherry). A set of 26 microsatellite markers covering all the eight chromosomes, was also selected and used in the molecular characterization, population genetics and structure analyses of a representative sample of the five diploid Prunus species, assessing their transportability and effectiveness. The combined probability of identity between two random individuals for the whole set of 26 SSRs was quite low, ranging from 2.30 × 10(-7) in peach to 9.48 × 10(-10) in almond, confirming the usefulness of the proposed set for fingerprinting analyses in Prunus species.

  9. Screening of native plant species for phytoremediation potential at a Hg-contaminated mining site.

    Science.gov (United States)

    Marrugo-Negrete, José; Marrugo-Madrid, Siday; Pinedo-Hernández, José; Durango-Hernández, José; Díez, Sergi

    2016-01-15

    Artisanal and small-scale gold mining (ASGM) is the largest sector of demand for mercury (Hg), and therefore, one of the major sources of Hg pollution in the environment. This study was conducted in the Alacrán gold-mining site, one of the most important ASGM sites in Colombia, to identify native plant species growing in Hg-contaminated soils used for agricultural purposes, and to assess their potential as phytoremediation systems. Twenty-four native plant species were identified and analysed for total Hg (THg) in different tissues (roots, stems, and leaves) and in underlying soils. Accumulation factors (AF) in the shoots, translocation (TF) from roots to shoots, and bioconcentration (BCF) from soil-to-roots were determined. Different tissues from all plant species were classified in the order of decreasing accumulation of Hg as follows: roots > leaves > stems. THg concentrations in soil ranged from 230 to 6320 ng g(-1). TF values varied from 0.33 to 1.73, with high values in the lower Hg-contaminated soils. No correlation was found between soils with low concentrations of Hg and plant leaves, indicating that TF is not a very accurate indicator, since most of the Hg input to leaves at ASGM sites comes from the atmosphere. On the other hand, the BCF ranged from 0.28 to 0.99, with Jatropha curcas showing the highest value. Despite their low biomass production, several herbs and sub-shrubs are suitable for phytoremediation application in the field, due to their fast growth and high AF values in large and easily harvestable plant parts. Among these species, herbs such as Piper marginathum and Stecherus bifidus, and the sub-shrubs J. curcas and Capsicum annuum are promising native plants with the potential to be used in the phytoremediation of soils in tropical areas that are impacted by mining.

  10. Potential of satellite-derived ecosystem functional attributes to anticipate species range shifts

    Science.gov (United States)

    Alcaraz-Segura, Domingo; Lomba, Angela; Sousa-Silva, Rita; Nieto-Lugilde, Diego; Alves, Paulo; Georges, Damien; Vicente, Joana R.; Honrado, João P.

    2017-05-01

    In a world facing rapid environmental changes, anticipating their impacts on biodiversity is of utmost relevance. Remotely-sensed Ecosystem Functional Attributes (EFAs) are promising predictors for Species Distribution Models (SDMs) by offering an early and integrative response of vegetation performance to environmental drivers. Species of high conservation concern would benefit the most from a better ability to anticipate changes in habitat suitability. Here we illustrate how yearly projections from SDMs based on EFAs could reveal short-term changes in potential habitat suitability, anticipating mid-term shifts predicted by climate-change-scenario models. We fitted two sets of SDMs for 41 plant species of conservation concern in the Iberian Peninsula: one calibrated with climate variables for baseline conditions and projected under two climate-change-scenarios (future conditions); and the other calibrated with EFAs for 2001 and projected annually from 2001 to 2013. Range shifts predicted by climate-based models for future conditions were compared to the 2001-2013 trends from EFAs-based models. Projections of EFAs-based models estimated changes (mostly contractions) in habitat suitability that anticipated, for the majority (up to 64%) of species, the mid-term shifts projected by traditional climate-change-scenario forecasting, and showed greater agreement with the business-as-usual scenario than with the sustainable-development one. This study shows how satellite-derived EFAs can be used as meaningful essential biodiversity variables in SDMs to provide early-warnings of range shifts and predictions of short-term fluctuations in suitable conditions for multiple species.

  11. Phytoextractor Potential of Cultivated Species in Industrial Area Contaminated by Lead

    Directory of Open Access Journals (Sweden)

    Silvânia Maria de Souza Gomes Nascimento

    Full Text Available ABSTRACT: High growth rate is one of the criteria used for the selection of species to be used in metal phytoextraction programs. This study was carried out to characterize the growth characteristics of sunflower (Helianthus annuus L., castor bean (Ricinus communis L., corn (Zea mays L, and vetiver [Vetiveria zizanioides (L. Nash] grown on a soil contaminated with lead (Pb, with and without pH correction, to improve agronomic practices regarding phytoremediation programs. The experiment was designed as a randomized block with four replications; treatments were arranged in a split-plot arrangement, with the main plot representing the species (sunflower, castor bean, corn, and vetiver, with or without pH correction and soil fertilization, and the split-plot representing harvest periods (60, 90, and 120 days after planting. After variance analysis and mean comparison analysis of the data by the Tukey test (p≤0.05, a significant effect was observed from soil pH correction for vetiver in all of the growth variables evaluated, except for the leaf area index at 120 days after planting (DAP. Castor bean and sunflower plants in soil with high acidity conditions, without pH correction (pH˂4.0, were affected by soil Pb levels. Corn plants benefited from soil pH correction and had improved results for the plant height, diameter, and leaf area variables at 60 and 90 DAP, as well as leaf area index at 60 DAP. There was no increase in these variables between the harvest periods evaluated. Regarding phytoextraction potential, corn and vetiver had the highest Pb translocation to the plant shoots at 90 DAP and were therefore considered the most suitable species for phytoremediation of the area under study. Overall, liming was essential for improving species biomass production for all the species studied in soils with high Pb availability in solution.

  12. Comparison of phytoremediation potential of three grass species in soil contaminated with cadmium

    Directory of Open Access Journals (Sweden)

    Gołda Sylwia

    2016-03-01

    Full Text Available The aim of the study was to compare the toleration of Poa pratensis, Lolium perenne and Festuca rubra to cadmium contamination as well as the phytoremediation potential of these three species of grass. The pot experiment was conducted in four replications in pots containing 2.0 kg of soil. The soil was contaminated with three doses of Cd – 30, 60 and 120 mg·kg−1. After two months, the aerial parts of plants were harvested. The roots were dug up, brushed off from the remaining soil and washed with water. The biomass was defined and the cadmium concentration was determined in aerial parts and roots. The phytoremediation potential of grasses was evaluated using biomass of grasses, bioaccumulation factor (BF and translocation factor (TF. All three tested species of grasses had TF 1. It indicates their suitability for phytostabilisation and makes them unsuitable for phytoextraction of Cd from the soil. Comparing the usefulness of the tested grasses for phytoremediation has shown that the phytostabilisation potential of P. pratensis was lower than that of L. perenne and F. rubra. P. pratensis was distinguished by higher TF, smaller root biomass and lower tolerance for Cd excess in the soil in comparison with the two other test grasses. At the same time, L. perenne was characterised by the smallest decrease in biomass and the largest Cd accumulation in roots at the lowest dose of Cd. It indicates good usefulness for phytostabilisation of soils characterised by a relatively small pollution by cadmium.

  13. Study of a model Fermi liquid interacting via a hard-core repulsive potential and an attractive tail

    International Nuclear Information System (INIS)

    Ng, Tai Kai; Singwi, K.S.

    1986-02-01

    In this paper we present an extensive microscopic study of the collective and single-particle properties of a model Fermi liquid whose particles interact via a repulsive hard-core potential and an attractive tail. The model system is intended to simulate liquid 3 He. The study is based on an approximate scheme of Singwi, Tosi, Land and Sjoelander (STLS) which was devised to treat correlations in Coulomb Fermi liquids. The primary aim of this study is to learn whether the model system is capable of reproducing some of the salient features observed in normal liquid 3 He, and about the role of the repulsive and attractive parts of the potential. We have calculated the Landau parameters F 0 /sup s/ and F 0 /sup a/ and their variation with pressure, the wave number and pressure dependence of the spin-symmetric and spin-anti-symmetric polarization potentials, pressure dependence of the dispersion of the zero sound, the static structure factors and the quasiparticle mass. Although we make no quantitative claims when comparing our calculations with experiments in real liquid 3 He, we do conclude that our model system within the framework of the STLS scheme can account qualitatively for the latter. Besides, since the theory is microscopic in nature and is parameter free, it has enabled us to understand better the role of the repulsive and the attractive parts of the bare potential in determining the properties of liquid 3 He. 27 figs., 2 tabs

  14. Extinction Risk of Phytoplankton Species to Potential Killing Mechanisms at the Cretaceous-Paleogene Boundary

    Science.gov (United States)

    Bralower, T. J.; Schueth, J.; Jiang, S.

    2013-05-01

    certainly occurred over durations far shorter than can be resolved in the stratigraphic record, determining their ultimate causes is challenging and far more speculative. In our presentation, we discuss the extinction risk of latest Maastrichtian nannoplankton species by comparing our understanding of their ecology with the biological effects of each potential killing mechanism. Our results show that no one mechanism can explain the extinction of nannoplankton as a group, while also explaining the selection of survivors. We show how acidification and eutrophication amplified extinction risk of species to cessation of photosynthesis caused by darkness.

  15. Antifouling potential of some marine organisms from India against species of Bacillus and Pseudomonas

    Digital Repository Service at National Institute of Oceanography (India)

    Bhosale, S.H; Nagle, V.L.; Jagtap, T.G.

    Potential of Some Marine Organisms from India Against Species of Bacillus and Pseudomonas S.H. Bhosale, V.L. Nagle, and T.G. Jagtap* National Institute of Oceanography, Dona Paula, Goa-403004, India Abstract: Crude methanolic extracts of 37 marine organisms.... The discs were placed in Zobell marine agar (pH 7.3) plates seeded with different strains of bacteria selected for studies. The cultures were incubated for 24 to 48 hours at room temperature, to obtain maximum growth in the culture media. The zones of inhi...

  16. Fuelwood production potential of six Prosopis species on an alkaline soil site

    Energy Technology Data Exchange (ETDEWEB)

    Goel, V.L.; Behl, H.M. [National Botanical Research Inst., Lucknow (India). Biomass Research Center

    1995-07-01

    The biomass potential of six species Prosopis was evaluated on highly alkaline soil site. Prosopis alba I was found to have the fastest growth rate and highest above-ground biomass production. P. juliflora ranked next. P. cineraria showed high plant establishment but relatively slow growth. The performance of P. glandulosa was poor on such sites. The high fuelwood value index and rapid growth rate of P. juliflora and P. alba makes them suitable for short-rotation fuelwood forestry programmes on waste-lands. Selection of promising genotypes is suggested as a means of improvement in yields. (author)

  17. Metal contents in common edible fish species and evaluation of potential health risks to consumers

    Directory of Open Access Journals (Sweden)

    Naglaa Farag Soliman

    2015-12-01

    Full Text Available Objective: To conduct a health risk assessment of some heavy metals attributed to consumption of common edible fish species available for consumers. Methods: Concentrations of Cd, Cr, Cu, Fe, Mn, Pb and Zn were determined in muscles, gills, livers, bones and skins of six common edible fish species, namely Oreochromis niloticus, Mugil cephalus, Sardinella aurita, Mullus barbatus, Boops boops, Pagrus pagrus. Concentrations of heavy metals were determined by atomic absorption spectrophotometer and expressed as µg/g of wet tissue. Results: Results showed that iron and zinc were the most abundant among all fish tissues under investigation. The data obtained in the present work were compared well with the counterpart data reported internationally. The estimated values of all metals in muscles of fish in this study were below the permissible limits. Moreover, the potential health risks of metals to human via consumption of seafood were assessed by estimating daily intake and target heath quotient. Generally, risk values for the measured metals do not pose unacceptable risks at mean ingestion rate for muscles. Conclusions: It can be concluded that the investigated metals in edible parts of the examined species have no health problems for consumers.

  18. Preliminary investigation of Culicidae species in South Pantanal, Brazil and their potential importance in arbovirus transmission.

    Science.gov (United States)

    Pauvolid-Corrêa, Alex; Tavares, Fernando Neto; Alencar, Jeronimo; Silva, Julia dos Santos; Murta, Michele; Serra-Freire, Nicolau Maués; Pellegrin, Aiesca Oliveira; Gil-Santana, Hélcio; Guimarães, Anthony Erico; Silva, Edson Elias da

    2010-01-01

    In view of the high circulation of migratory birds and the environmental and climatic conditions which favor the proliferation of arthropods, the Brazilian Pantanal is susceptible to circulation of arboviruses. However, the amount of data concerning arbovirus vectors in this area is scarce; therefore the aim of this study was to conduct a preliminary investigation of Culicidae species in the Nhecolândia Sub-region of South Pantanal, Brazil and their potential importance in the arbovirus transmission. A total of 3684 specimens of mosquitoes were captured, 1689 of which caught in the rainy season of 2007, were divided into 78 pools and submitted to viral isolation, Semi-Nested RT-PCR and Nested RT-PCR, with a view to identifying the most important arboviruses in Brazil. Simultaneously, 70 specimens of ticks found blood-feeding on horses were also submitted to the same virological assays. No virus was isolated and viral nucleic-acid detection by RT-PCR was also negative. Nevertheless, a total of 22 Culicidae species were identified, ten of which had previously been reported as vectors of important arboviruses. The diversity of species found blood-feeding on human and horse hosts together with the arboviruses circulation previously reported suggest that the Nhecolândia Sub-region of South Pantanal is an important area for arbovirus surveillance in Brazil.

  19. Investigation of wild species potential to increase genetic diversity useful for apple breeding

    Directory of Open Access Journals (Sweden)

    Dan Catalina

    2015-01-01

    Full Text Available The potential of testing new apple cultivars and the possibility to induce valuable traits is directly dependent on the availability of sufficient genetic diversity, while apple breeding has narrowed the genetic ground of commercial cultivars. Wild species were studied in regard to their influence upon progenies and their capacity to enlarge apple genetic diversity. The interspecific seedlings were framed in five biparental mating (paired crosses, in which Malus species were crossed with different cultivars, obtaining half-sib families. The number of F1 progenies per combination varied from 31 (Cluj 218/2 × M. floribunda up to 142 (Reinette Baumann × M. floribunda, with a total of 1650 hybrids F1. The influences upon vigour and juvenile period and possible correlation among fruit size and taste were analyzed. Juvenile period varied from 6.00 (M. zumi × Jonathan to 9.31 years (Cluj 218/2 × M. floribunda. Data based on correlation coefficient illustrated that the fructification year was not influenced by the vigour of trees. The highest value of correlation for fruit’s size and taste was obtained among M. coronaria hybrids. This result might suggest that once the fruit are larger, there is a high chance the taste is also more appreciative and fruit quality for mouth feels increase. Depending on the parental formula, additive effects may be inferior compared to genetic effects of dominance and epistasis. Although M. zumi and M. floribunda achieved the same genetic gain (0.31, M. zumi had a higher expected selection response for fruit size. The difficulty of obtaining seedlings with tasty and large fruit when wild Malus species are used as genitors is resulting from the values of expected selection response data, but in the same time results confirm that wild Malus species are suitable resources for genetic variability, both for dessert and ornamental apple cultivars.

  20. Minor lipid components of some Acacia species: potential dietary health benefits of the unexploited seeds

    Directory of Open Access Journals (Sweden)

    Nasri Nizar

    2012-05-01

    Full Text Available Abstract Background Oilseed samples from four Acacia species ( A. cyclops, A. ligulata, A. salicina and A. cyanophylla were analyzed in order to evaluate the potential nutritional value of their unexploited seeds. Methods Samples were collected from different Tunisian geographic locations. Seed oils were extracted and carotenoids, tocopherols and sterols were analyzed using chromatographic methods. Results The studied Acacia seeds seem to be quite rich in lipids (from 6% to 12%. All Acacia species contain mainly the xanthophylls zeaxanthin and lutein compounds: from ca. 38 mg.kg-1 of total lipids (A. cyclops to ca. 113 mg.kg-1 of total lipids (A. cyanophylla. Total tocopherols varied from ca. 221 mg.kg-1 of total lipids (A. cyclops to ca. 808 mg.kg-1 of total lipids (A. ligulata. Sterols are highly present and their contents ranged between ca. 7 g. kg-1 of total lipids (A. salicina and 11 g. kg-1 of total lipids (A. cyclops. Conclusion This study highlights that these unexploited seeds might have a potential nutritional value and encourages researchers to more explore and find developments for these plants for healthy purposes.

  1. The potential for biodiversity offsetting to fund effective invasive species control.

    Science.gov (United States)

    Norton, David A; Warburton, Bruce

    2015-02-01

    Compensating for biodiversity losses in 1 location by conserving or restoring biodiversity elsewhere (i.e., biodiversity offsetting) is being used increasingly to compensate for biodiversity losses resulting from development. We considered whether a form of biodiversity offsetting, enhancement offsetting (i.e., enhancing the quality of degraded natural habitats through intensive ecological management), can realistically secure additional funding to control biological invaders at a scale and duration that results in enhanced biodiversity outcomes. We suggest that biodiversity offsetting has the potential to enhance biodiversity values through funding of invasive species control, but it needs to meet 7 key conditions: be technically possible to reduce invasive species to levels that enhance native biodiversity; be affordable; be sufficiently large to compensate for the impact; be adaptable to accommodate new strategic and tactical developments while not compromising biodiversity outcomes; acknowledge uncertainties associated with managing pests; be based on an explicit risk assessment that identifies the cost of not achieving target outcomes; and include financial mechanisms to provide for in-perpetuity funding. The challenge then for conservation practitioners, advocates, and policy makers is to develop frameworks that allow for durable and effective partnerships with developers to realize the full potential of enhancement offsets, which will require a shift away from traditional preservation-focused approaches to biodiversity management. © 2014 Society for Conservation Biology.

  2. On the Potential Role of Species Separation in DT Fuels on Implosion Performance

    Science.gov (United States)

    Amendt, Peter; Bellei, Claudio; Wilks, Scott; Haines, Malcolm; Casey, Dan; Li, C. K.; Petrasso, Richard

    2012-10-01

    The measurement of strong, self-generated electric fields (1-10 GVolts/m) in imploding capsules [1], their attribution to polarized (plasma) shock fronts [2], and the identification of plasma-enhanced binary species diffusion from barodiffusion and electrodiffusion [3] have led to a growing interest in the potential role of species separation in inertial-confinement-fusion (ICF) thermonuclear fuels. The potential for anomalous heating from transient frictional or resistive drag between D and T across a finite thickness shock front will be assessed and applied towards ignition thresholds and understanding some outstanding anomalies in the Omega implosion database.[4pt] [1] J.R. Rygg et al., Science 319, 1223 (2008); C.K. Li et al., Phys. Rev. Lett. 100, 225001 (2008).[0pt] [2] P.A. Amendt, J.L. Milovich, S.C. Wilks, C.K. Li, R.D. Petrasso and F.H. S'eguin, Plasma Phys. Control. Fusion 51, 124048 (2009).[0pt] [3] P. Amendt, C. Bellei and S.C. Wilks, Phys. Rev. Lett. (to appear).

  3. Antioxidant potential of lichen species and their secondary metabolites. A systematic review.

    Science.gov (United States)

    Fernández-Moriano, Carlos; Gómez-Serranillos, María Pilar; Crespo, Ana

    2016-01-01

    Pharmacological interest of lichens lies in their capacity to produce bioactive secondary metabolites, being most of them phenolic compounds with reactive hydroxyl groups that confer antioxidant potential through various mechanisms. Increasing incidence and impact of oxidative stress-related diseases (i.e., neurodegenerative disorders) has encouraged the search of new pharmacological strategies to face them. Lichens appear to be a promising source of phenolic compounds in the discovery of natural products exerting antioxidant activity. The present review thoroughly discusses the available knowledge on antioxidant properties of lichens, including both in vitro and in vivo studies and the parameters assessed so far on lichen constituents. Literature survey was performed by using as main databases PubMed, Google Scholar, Scopus, Science Direct, and Recent Literature on Lichens. We reviewed 98 highlighted research articles without date restriction. Current report collects data related to antioxidant activities of more than 75 lichen species (from 18 botanical families) and 65 isolated metabolites. Much information comes from in vitro investigations, such as chemical assays evaluating radical scavenging properties, lipid peroxidation inhibition, and reducing power of lichen species and compounds; similarly, research on cellular substrates and animal models generally measures antioxidant enzymes levels and other antioxidant markers, such as glutathione levels or tissue peroxidation. Since consistent evidence demonstrated the contribution of oxidative stress on the development and progression of several human diseases, reviewed data suggest that some lichen compounds are worthy of further investigation and better understanding of their antioxidant and neuroprotective potentials.

  4. Analysis of the potentiality haying of native forage species in semiarid region

    Directory of Open Access Journals (Sweden)

    Enoque de Sousa Leão

    2017-10-01

    Full Text Available The objective of this study was to evaluate the potential hay production from Spiny Amaranth (Amaranthus spinosus, Hairy Woodrose (Merremia aegyptia, Malva (Sida galheirensis, Mucuna (Mucuna pruriens and Ervanço (Froelichia humboldtiana, native forage species of the semiarid region of Brazil by observing morphological components of the plant, such as the dehydration curve, crude protein loss (CPL curve, chemical composition of plant and hay and hay degradability in situ. There were differences (P < 0.05 among species on leaf, stem and inflorescence quantification with Ervanço, Hairy Woodrose, and Mucuna having a greater number of leaves. There was a linearly increasing response for the dehydration curve of the five forage plants species. Mucuna forage had the greatest hay point at 800 g kg-1 dried matter (DM after 11.8 hours and Woodrose had a lower dehydration efficiency, which required 25 hours of sun exposure. There was no difference in CPL. Mucuna had the lowest crude protein (CP, neutral detergent fiber (NDF and acid detergent fiber (ADF content, 8.4, 67.7 and 73.8 g kg DM-1 in hay in relation to the plant, respectively. Ervanço, Spiny Amaranth, Hairy Woodrose and Malva hay had more of soluble fraction “a” of DM of 31.0, 26.2, 22.1 and 9.7 g kg-1 DM than Mucuna, respectively. Spiny Amaranth and Malva hay had values of 335.4 and 193.2 g kg-1 DM of fraction “b” more than Ervanço hay, respectively. For fraction “a’’ of CP, Spiny Amaranth and Hairy Woodrose hay obtained 312.6 and 227.4 g kg-1 CP more than that observed for Malva, respectively. Mucuna had better hay potential among the forage studied in the semiarid region of Brazil.

  5. Revisiting plant conservation on wooded shrines by a transversal approach: "Core" vs. "satellite" species and anthropological knowledge in Bwaba land, Burkina Faso

    Directory of Open Access Journals (Sweden)

    Anne Fournier

    2013-03-01

    Full Text Available Studies on plant conservation in sacred groves provide mixed results, with some showing their effectiveness while others do not. We argue that beyond the variety of field cases, studies usually suffer from overrating rare species and insufficient consideration of societal data. The sacred sites of Bondoukuy department in Bwaba cultural area (Burkina Faso were geo-referenced and measured; the most abundant ligneous species were listed and their abundance recorded. Their conservation status and dynamics were assessed based on the core vs. satellite species model of Hanski. Data interpretations relied on the phytogeographical affinities of abundant species and on anthropological knowledge of the Bwaba society. The vast majority of shrines were less than 1 ha, located in or near villages in specific landscape features, and covered with trees. The most abundant species of shrines belonged mostly to local phytochories, but were subject to rather high anthropisation. The results support the concept that wooded shrines preserve local biodiversity, but indicate threats from an invasive alien species. The location and condition of shrines appeared to be constitutive features: the Bwaba system of thought involves a series of sacred sites (with and without trees located in remarkable features of the landscape, and their way of life has resulted in the proximity of these sites to the villages. The beliefs that promote plant cover conservation do so only to a certain extent and regardless of the species content, which raises the concern that alien species may upset the established communities. These beliefs have led the Bwaba to choose the most humid environments in which to set up their wooded shrines, which is interesting from a conservation perspective. The study advocates for a better consideration of social data to identify the key elements of the dynamics of the vegetation of sacred groves.

  6. Antimycotic potential of a diterpenoid taxoquinone against Candida species isolated from Metasequoia glyptostroboides

    Directory of Open Access Journals (Sweden)

    Vivek K. Bajpai

    2014-06-01

    Full Text Available The objective of this study was to confirm the antimycotic potential of a diterpenoid compound taxoquinone, isolated from Metasequoia glyptostroboides against pathogenic isolates of Candida species. The taxoquinone (100 μg/disc displayed potential anticandidal effect against Candia albicans KBN06P00076, KBN06P00074, C. glabrata KBN06P00066, KBN06P00068, C. tropicalis KBN06P00682, KBN06P00058, C. parapsilosis KBN06P00060, KBN06P00055, and C. guilliermondii KBN06P00492 and KBN06P00867 as a diameter of zones of inhibition, found in the range of 10 ± 0.6 to 13 ± 1.1 mm. The minimum inhibitory and minimum fungicidal concentrations of taxoquinone against the tested clinical isolates were found in the range of 125 to 500 and 125 to 1,000 μg/mL, respectively. On the viable counts of the tested fungal isolates, the taxoquinone evoked a remarkable anticandidal effect. Elaborative study of SEM revealed potential detrimental effect of taxoquinone on the morphology of C. parapsilosis KBN06P00060 at MIC concentration. These findings confirmed therapeutic potential of taxoquinone.

  7. Antifungal and antimycotoxigenic metabolites in Anacardiaceae species from northwest Argentina: isolation, identification and potential for control of Fusarium species.

    Science.gov (United States)

    Aristimuño Ficoseco, M E; Vattuone, M A; Audenaert, K; Catalán, C A N; Sampietro, D A

    2014-05-01

    The purpose of this research was to identify antifungal compounds from leaves of Schinus and Schinopsis species useful for the control of toxigenic Fusarium species responsible of ear rot diseases. Leaves of Schinopsis (S. lorentzii and S. haenkeana) and Schinus (S. areira, S. gracilipes and S. fasciculatus) were sequentially extracted with dichloromethane, ethyl acetate and methanol. The antifungal activity of the fraction soluble in methanol of these extracts (fCH2Cl2, fAcEt and fMeOH, respectively) was determined by the broth microdilution method and the disc-diffusion method. The minimum inhibitory dose (MID), the diameter of growth inhibition (DGI) and the minimum concentration for 50% inhibition of fungal growth (MIC50) were calculated. The fCH2Cl2 and fAcEt of the Schinopsis species had the lowest MID and MIC50 values and the highest DGI. The antifungal compounds were identified as lupeol and a mix of phenolic lipids. The last one had the highest antifungal activity with MIC50 31-28 μg g(-1) and 165-150 μg g(-1) on Fusarium graminearum and Fusarium verticillioides, respectively. The identified metabolites completely inhibited fumonisin and deoxynivalenol production at lower concentrations than ferulic acid, a natural antimycotoxigenic compound. It was proven that lupeol and phenolic lipids were inhibitors of both fungal growth and mycotoxin production of toxigenic Fusarium species. This fact is specially interesting in the control of the toxigenic Fusarium species because several commercial antifungals showed to stimulate mycotoxin biosynthesis at sublethal concentrations. Control of toxigenic Fusarium species requires compounds able to inhibit both fungal growth and mycotoxin production. Our results suggest that the use of lupeol as food preservative and the phenolic lipids as fungal growth inhibitors of F. verticillioides and F. graminearum did not imply an increase in mycotoxin accumulation. © 2014 The Society for Applied Microbiology.

  8. Hepatitis C virus core protein targets 4E-BP1 expression and phosphorylation and potentiates Myc-induced liver carcinogenesis in transgenic mice.

    Science.gov (United States)

    Abdallah, Cosette; Lejamtel, Charlène; Benzoubir, Nassima; Battaglia, Serena; Sidahmed-Adrar, Nazha; Desterke, Christophe; Lemasson, Matthieu; Rosenberg, Arielle R; Samuel, Didier; Bréchot, Christian; Pflieger, Delphine; Le Naour, François; Bourgeade, Marie-Françoise

    2017-08-22

    Hepatitis C virus (HCV) is a leading cause of liver diseases including the development of hepatocellular carcinoma (HCC). Particularly, core protein has been involved in HCV-related liver pathologies. However, the impact of HCV core on signaling pathways supporting the genesis of HCC remains largely elusive. To decipher the host cell signaling pathways involved in the oncogenic potential of HCV core, a global quantitative phosphoproteomic approach was carried out. This study shed light on novel differentially phosphorylated proteins, in particular several components involved in translation. Among the eukaryotic initiation factors that govern the translational machinery, 4E-BP1 represents a master regulator of protein synthesis that is associated with the development and progression of cancers due to its ability to increase protein expression of oncogenic pathways. Enhanced levels of 4E-BP1 in non-modified and phosphorylated forms were validated in human hepatoma cells and in mouse primary hepatocytes expressing HCV core, in the livers of HCV core transgenic mice as well as in HCV-infected human primary hepatocytes. The contribution of HCV core in carcinogenesis and the status of 4E-BP1 expression and phosphorylation were studied in HCV core/Myc double transgenic mice. HCV core increased the levels of 4E-BP1 expression and phosphorylation and significantly accelerated the onset of Myc-induced tumorigenesis in these double transgenic mice. These results reveal a novel function of HCV core in liver carcinogenesis potentiation. They position 4E-BP1 as a tumor-specific target of HCV core and support the involvement of the 4E-BP1/eIF4E axis in hepatocarcinogenesis.

  9. Cadmium-free aqueous synthesis of ZnSe and ZnSe@ZnS core-shell quantum dots and their differential bioanalyte sensing potential

    Science.gov (United States)

    Mir, Irshad Ahmad; Rawat, Kamla; Bohidar, H. B.

    2016-10-01

    Herein we report a facile and cadmium-free approach to prepare water-soluble fluorescent ZnSe@ZnS core-shell quantum dots (QDs), using thioglycolic acid (TGA) ligand as a stabilizer and thiourea as a sulfur source. The optical properties and morphology of the obtained core-shell QDs were characterized by UV-vis and fluorescence spectroscopy, transmission electron microscopy (TEM), energy-dispersive x-ray analysis (EDX), x-ray diffraction (XRD), electrophoresis and dynamic light scattering (DLS) techniques. TEM analysis, and electrophoresis data showed that ZnSe core had an average size of 3.60 ± 0.12 nm and zeta potential of -38 mV; and for ZnSe@ZnS QDs, the mean size was 4.80 ± 0.20 nm and zeta potential was -45 mV. Compared to the core ZnSe QDs, the quantum yield of these core-shell structures was higher (13% versus 32%). These were interacted with five common bioanalytes such as, ascorbic acid, citric acid, oxalic acid, glucose and cholesterol which revealed fluorescence quenching due to concentration dependent binding of analytes to the core only, and core-shell QDs. The binding pattern followed the sequence: cholesterol ascorbic acid acid acid for ZnSe, and cholesterol acid ascorbic acid acid for core-shell QDs. Thus, enhanced binding was noticed for the analyte citric acid which may facilitate development of a fluorescence-based sensor based on the ZnSe core-only quantum dot platform. Further, the hydrophilic core-shell structure may find use in cell imaging applications.

  10. Potential Asteraceae Invaders in Taiwan: Insights from the Flora and Herbarium Records of Casual and Naturalized Alien Species

    Directory of Open Access Journals (Sweden)

    Shan-Huah Wu

    2005-03-01

    Full Text Available Naturalization has been shown to be one of the primary stages of plant invasions; therefore, studies on naturalized plant species may generate valuable insights of possible invaders and invasions. Background information of casual and naturalized Asteraceae species provided by a comprehensive list of casual and naturalized species in Taiwan was examined to estimate the basic biological traits and geological origins of potential invasive species in this study. Besides, herbarium records were collected and analyzed to predict the invasiveness of casual and naturalized Asteraceae species. Our results showed that 44.0% out of the 51 casual and naturalized Asteraceae species were classified as invasive in the field, and a notable portion of these species were probably introduced accidently. Tropical Americas were the most important origins of casual and naturalized Asteraceae species, followed by Europe and temperate Americas. Most of the casual and naturalized Asteraceae species were annual herbs, and a few perennial species categorized as invasive may cause profound environmental problems. The herbarium record showed that species possessed different numbers of localities within the same time frame. We suggested that casual and naturalized Asteraceae species collected in more localities are more invasive than those species found in fewer localities within the same period of time.

  11. Self-assembly of core-polyethylene glycol-lipid shell (CPLS) nanoparticles and their potential as drug delivery vehicles

    Science.gov (United States)

    Shen, Zhiqiang; Loe, David T.; Awino, Joseph K.; Kröger, Martin; Rouge, Jessica L.; Li, Ying

    2016-08-01

    Herein a new multifunctional formulation, referred to as a core-polyethylene glycol-lipid shell (CPLS) nanoparticle, has been proposed and studied in silico via large scale coarse-grained molecular dynamics simulations. A PEGylated core with surface tethered polyethylene glycol (PEG) chains is used as the starting configuration, where the free ends of the PEG chains are covalently bonded with lipid molecules (lipid heads). A complete lipid bilayer is formed at the surface of the PEGylated particle core upon addition of free lipids, driven by the hydrophobic properties of the lipid tails, leading to the formation of a CPLS nanoparticle. The self-assembly process is found to be sensitive to the grafting density and molecular weight of the tethered PEG chains, as well as the amount of free lipids added. At low grafting densities the assembly of CPLS nanoparticles cannot be accomplished. As demonstrated by simulations, a lipid bud/vesicle can be formed on the surface when an excess amount of free lipids is added at high grafting density. Therefore, the CPLS nanoparticles can only be formed under appropriate conditions of both PEG and free lipids. The CPLS nanoparticle has been recognized to be able to store a large quantity of water molecules, particularly with high molecular weight of PEG chains, indicating its capacity for carrying hydrophilic molecules such as therapeutic biomolecules or imaging agents. Under identical size and surface chemistry conditions of a liposome, it has been observed that the CPLS particle can be more efficiently wrapped by the lipid membrane, indicating its potential for a greater efficiency in delivering its hydrophilic cargo. As a proof-of-concept, the experimental realization of CPLS nanoparticles is explicitly demonstrated in this study. To test the capacity of the CPLS to store small molecule cargo a hydrophilic dye was successfully encapsulated in the particles' water soluble layer. The results of this study show the power and

  12. Conserved B-cell epitopes among human bocavirus species indicate potential diagnostic targets.

    Directory of Open Access Journals (Sweden)

    Zhuo Zhou

    Full Text Available BACKGROUND: Human bocavirus species 1-4 (HBoV1-4 have been associated with respiratory and enteric infections in children. However, the immunological mechanisms in response to HBoV infections are not fully understood. Though previous studies have shown cross-reactivities between HBoV species, the epitopes responsible for this phenomenon remain unknown. In this study, we used genomic and immunologic approaches to identify the reactive epitopes conserved across multiple HBoV species and explored their potential as the basis of a novel diagnostic test for HBoVs. METHODOLOGY/PRINCIPAL FINDINGS: We generated HBoV1-3 VP2 gene fragment phage display libraries (GFPDLs and used these libraries to analyze mouse antisera against VP2 protein of HBoV1, 2, and 3, and human sera positive for HBoVs. Using this approach, we mapped four epitope clusters of HBoVs and identified two immunodominant peptides--P1 (¹MSDTDIQDQQPDTVDAPQNT²⁰, and P2 (¹⁶²EHAYPNASHPWDEDVMPDL¹⁸⁰--that are conserved among HBoV1-4. To confirm epitope immunogenicity, we immunized mice with the immunodominant P1 and P2 peptides identified in our screen and found that they elicited high titer antibodies in mice. These two antibodies could only recognize the VP2 of HBoV 1-4 in Western blot assays, rather than those of the two other parvoviruses human parvovirus B19 and human parvovirus 4 (PARV4. Based on our findings, we evaluated epitope-based peptide-IgM ELISAs as potential diagnostic tools for HBoVs IgM antibodies. We found that the P1+P2-IgM ELISA showed a higher sensitivity and specificity in HBoVs IgM detection than the assays using a single peptide. CONCLUSIONS/SIGNIFICANCE: The identification of the conserved B-cell epitopes among human bocavirus species contributes to our understanding of immunological cross-reactivities of HBoVs, and provides important insights for the development of HBoV diagnostic tools.

  13. Can a native rodent species limit the invasive potential of a non-native rodent species in tropical agroforest habitats?

    Science.gov (United States)

    Stuart, Alexander M; Prescott, Colin V; Singleton, Grant R

    2016-06-01

    Little is known about native and non-native rodent species interactions in complex tropical agroecosystems. We hypothesised that the native non-pest rodent Rattus everetti may be competitively dominant over the invasive pest rodent Rattus tanezumi within agroforests. We tested this experimentally by using pulse removal for three consecutive months to reduce populations of R. everetti in agroforest habitat, and assessed over 6 months the response of R. tanezumi and other rodent species. Following removal, R. everetti individuals rapidly immigrated into removal sites. At the end of the study period, R. tanezumi were larger and there was a significant shift in their microhabitat use with respect to the use of ground vegetation cover following the perturbation of R. everetti. Irrespective of treatment, R. tanezumi selected microhabitat with less tree canopy cover, indicative of severely disturbed habitat, whereas R. everetti selected microhabitat with a dense canopy. Our results suggest that sustained habitat disturbance in agroforests favours R. tanezumi, while the regeneration of agroforests towards a more natural state would favour native species and may reduce pest pressure in adjacent crops. In addition, the rapid recolonisation of R. everetti suggests this species would be able to recover from non-target impacts of short-term rodent pest control. © 2015 Society of Chemical Industry. © 2015 Society of Chemical Industry.

  14. Comparative genomics of four closely related Clostridium perfringens bacteriophages reveals variable evolution among core genes with therapeutic potential

    Directory of Open Access Journals (Sweden)

    Siragusa Gregory R

    2011-06-01

    Full Text Available Abstract Background Because biotechnological uses of bacteriophage gene products as alternatives to conventional antibiotics will require a thorough understanding of their genomic context, we sequenced and analyzed the genomes of four closely related phages isolated from Clostridium perfringens, an important agricultural and human pathogen. Results Phage whole-genome tetra-nucleotide signatures and proteomic tree topologies correlated closely with host phylogeny. Comparisons of our phage genomes to 26 others revealed three shared COGs; of particular interest within this core genome was an endolysin (PF01520, an N-acetylmuramoyl-L-alanine amidase and a holin (PF04531. Comparative analyses of the evolutionary history and genomic context of these common phage proteins revealed two important results: 1 strongly significant host-specific sequence variation within the endolysin, and 2 a protein domain architecture apparently unique to our phage genomes in which the endolysin is located upstream of its associated holin. Endolysin sequences from our phages were one of two very distinct genotypes distinguished by variability within the putative enzymatically-active domain. The shared or core genome was comprised of genes with multiple sequence types belonging to five pfam families, and genes belonging to 12 pfam families, including the holin genes, which were nearly identical. Conclusions Significant genomic diversity exists even among closely-related bacteriophages. Holins and endolysins represent conserved functions across divergent phage genomes and, as we demonstrate here, endolysins can have significant variability and host-specificity even among closely-related genomes. Endolysins in our phage genomes may be subject to different selective pressures than the rest of the genome. These findings may have important implications for potential biotechnological applications of phage gene products.

  15. Actual and potential use of population viability analyses in recovery of plant species listed under the US endangered species act.

    Science.gov (United States)

    Zeigler, Sara L; Che-Castaldo, Judy P; Neel, Maile C

    2013-12-01

    Use of population viability analyses (PVAs) in endangered species recovery planning has been met with both support and criticism. Previous reviews promote use of PVA for setting scientifically based, measurable, and objective recovery criteria and recommend improvements to increase the framework's utility. However, others have questioned the value of PVA models for setting recovery criteria and assert that PVAs are more appropriate for understanding relative trade-offs between alternative management actions. We reviewed 258 final recovery plans for 642 plants listed under the U.S. Endangered Species Act to determine the number of plans that used or recommended PVA in recovery planning. We also reviewed 223 publications that describe plant PVAs to assess how these models were designed and whether those designs reflected previous recommendations for improvement of PVAs. Twenty-four percent of listed species had recovery plans that used or recommended PVA. In publications, the typical model was a matrix population model parameterized with ≤5 years of demographic data that did not consider stochasticity, genetics, density dependence, seed banks, vegetative reproduction, dormancy, threats, or management strategies. Population growth rates for different populations of the same species or for the same population at different points in time were often statistically different or varied by >10%. Therefore, PVAs parameterized with underlying vital rates that vary to this degree may not accurately predict recovery objectives across a species' entire distribution or over longer time scales. We assert that PVA, although an important tool as part of an adaptive-management program, can help to determine quantitative recovery criteria only if more long-term data sets that capture spatiotemporal variability in vital rates become available. Lacking this, there is a strong need for viable and comprehensive methods for determining quantitative, science-based recovery criteria for

  16. Responses of Cryptofaunal Species Richness and Trophic Potential to Coral Reef Habitat Degradation

    Directory of Open Access Journals (Sweden)

    Derek P. Manzello

    2012-02-01

    Full Text Available Coral reefs are declining worldwide as a result of many anthropogenic disturbances. This trend is alarming because coral reefs are hotspots of marine biodiversity and considered the ‘rainforests of the sea. As in the rainforest, much of the diversity on a coral reef is cryptic, remaining hidden among the cracks and crevices of structural taxa. Although the cryptofauna make up the majority of a reef’s metazoan biodiversity, we know little about their basic ecology or how these communities respond to reef degradation. Emerging research shows that the species richness of the motile cryptofauna is higher among dead (framework vs. live coral substrates and, surprisingly, increases within successively more eroded reef framework structures, ultimately reaching a maximum in dead coral rubble. Consequently, the paradigm that abundant live coral is the apex of reef diversity needs to be clarified. This provides guarded optimism amidst alarming reports of declines in live coral cover and the impending doom of coral reefs, as motile cryptic biodiversity should persist independent of live coral cover. Granted, the maintenance of this high species richness is contingent on the presence of reef rubble, which will eventually be lost due to physical, chemical, and biological erosion if not replenished by live coral calcification and mortality. The trophic potential of a reef, as inferred from the abundance of cryptic organisms, is highest on live coral. Among dead framework substrates, however, the density of cryptofauna reaches a peak at intermediate levels of degradation. In summary, the response of the motile cryptofauna, and thus a large fraction of the reef’s biodiversity, to reef degradation is more complex and nuanced than currently thought; such that species richness may be less sensitive than overall trophic function.

  17. Genome sequencing of four Aureobasidium pullulans varieties: biotechnological potential, stress tolerance, and description of new species.

    Science.gov (United States)

    Gostinčar, Cene; Ohm, Robin A; Kogej, Tina; Sonjak, Silva; Turk, Martina; Zajc, Janja; Zalar, Polona; Grube, Martin; Sun, Hui; Han, James; Sharma, Aditi; Chiniquy, Jennifer; Ngan, Chew Yee; Lipzen, Anna; Barry, Kerrie; Grigoriev, Igor V; Gunde-Cimerman, Nina

    2014-07-01

    Aureobasidium pullulans is a black-yeast-like fungus used for production of the polysaccharide pullulan and the antimycotic aureobasidin A, and as a biocontrol agent in agriculture. It can cause opportunistic human infections, and it inhabits various extreme environments. To promote the understanding of these traits, we performed de-novo genome sequencing of the four varieties of A. pullulans. The 25.43-29.62 Mb genomes of these four varieties of A. pullulans encode between 10266 and 11866 predicted proteins. Their genomes encode most of the enzyme families involved in degradation of plant material and many sugar transporters, and they have genes possibly associated with degradation of plastic and aromatic compounds. Proteins believed to be involved in the synthesis of pullulan and siderophores, but not of aureobasidin A, are predicted. Putative stress-tolerance genes include several aquaporins and aquaglyceroporins, large numbers of alkali-metal cation transporters, genes for the synthesis of compatible solutes and melanin, all of the components of the high-osmolarity glycerol pathway, and bacteriorhodopsin-like proteins. All of these genomes contain a homothallic mating-type locus. The differences between these four varieties of A. pullulans are large enough to justify their redefinition as separate species: A. pullulans, A. melanogenum, A. subglaciale and A. namibiae. The redundancy observed in several gene families can be linked to the nutritional versatility of these species and their particular stress tolerance. The availability of the genome sequences of the four Aureobasidium species should improve their biotechnological exploitation and promote our understanding of their stress-tolerance mechanisms, diverse lifestyles, and pathogenic potential.

  18. Predicting Potential Changes in Suitable Habitat and Distribution by 2100 for Tree Species of the Eastern United States

    Science.gov (United States)

    Louis R Iverson; Anantha M. Prasad; Mark W. Schwartz; Mark W. Schwartz

    2005-01-01

    We predict current distribution and abundance for tree species present in eastern North America, and subsequently estimate potential suitable habitat for those species under a changed climate with 2 x CO2. We used a series of statistical models (i.e., Regression Tree Analysis (RTA), Multivariate Adaptive Regression Splines (MARS), Bagging Trees (...

  19. Changes in composition, cellulose degradability and biochemical methane potential of Miscanthus species during the growing season.

    Science.gov (United States)

    Peng, Xiaowei; Li, Chao; Liu, Jing; Yi, Zili; Han, Yejun

    2017-07-01

    The composition, cellulose degradability and biochemical methane potential (BMP) of M. sinensis, M. floridulus, Miscanthus×giganteus and M. lutarioriparius were investigated concomitantly at different growth/harvest times during their growing season. For all the four species, there was only a slight change in the compositional content. Meanwhile there was a huge change in the BMP values. At the growth time of 60days the BMPs ranged from 247.1 to 266.5mlg -1 VS. As growth time was prolonged, the BMPs decreased by 11-35%. For each species, the BMP was positively correlated to the cellulose degradability with the correlation coefficients (R 2 ) ranging from 0.8055 to 0.9925. This suggests that besides the biomass yield, it is justifiable to consider cellulose degradability when selecting the suitable harvest time for biofuels production from Miscanthus, especially in tropical and subtropical regions where Miscanthus can be harvested twice or more within a year. Copyright © 2017 Elsevier Ltd. All rights reserved.

  20. Nutritional Potential of Selected Insect Species Reared on the Island of Sumatra.

    Science.gov (United States)

    Adámková, Anna; Mlček, Jiří; Kouřimská, Lenka; Borkovcová, Marie; Bušina, Tomáš; Adámek, Martin; Bednářová, Martina; Krajsa, Jan

    2017-05-12

    Inhabitants of the Indonesian island of Sumatra are faced with the problem of insufficient food supplies and the consequent risk of undernourishment and health issues. Edible insects as a traditional and readily available food source could be part of the solution. The nutritional value of insects depends on many factors, e.g., species, developmental stage, sex, diet, and climatic conditions. However, edible insects bred in Sumatra for human consumption have never before been assessed with regard to their nutritional value. Our study involved analyses of crude protein, chitin, fat and selected fatty acid contents of giant mealworm larvae ( Zophobas morio ), larvae of the common mealworm ( Tenebrio molitor) and nymphs of the field cricket ( Gryllus assimilis ). Crude protein content in the samples ranged from 46% to 56%. Highest (35%) and lowest (31%) amounts of fat were recorded in giant mealworm larvae and larvae of the common mealworm, respectively. Chitin amounts ranged from 6% to 13%. Based on these values, which are comparable to those known from other food insects reared in different regions of the world, the edible species bred in Sumatra could become food sources with a potential to help stave off hunger and undernourishment.

  1. Monitoring potential geographical distribution of four wild bird species in China

    Science.gov (United States)

    Dai, S.; Feng, D.; Xu, B.

    2015-12-01

    The outbreak of highly pathogenic avian influenza (HPAI) of the H5N1 subtype in wild birds and poultry have caught worldwide attention. To explore the association between wild bird migration and avian influenza virus transmission, we monitored potential geographical distribution of four wild bird species that might carry the avian influenza viruses in China. They are Bar-headed geese (Anser indicus), Ruddy Shelduck (Tadorna ferruginea), Whooper Swan (Cygnus cygnus) and Black-headed Gull (Larus ridibundus). They served as major reservoir of the avian influenza viruses. We used bird watching records with the precise latitude/longitude coordinates from January 2002 to August 2014, and environmental variables with a pixel resolution of 5 km × 5 km from 2002 to 2014. The study utilized maximum entropy (MaxEnt) model based on ecological niche model approaches, and got the following results: 1) MaxEnt model have good discriminatory ability with the area under the curve (AUC) of the receiver operating curve (ROC) of 0.86-0.97; 2) The four wild bird species were estimated to concentrate in the North China Plain, the middle and lower region of the Yangtze River, Qinghai Lake, Tianshan Mountain and Tarim Basin, part of Tibet Plateau, and Hengduan Mountains; 3) Radiation and the minimum temperature were found to provide the most significant information. Our findings will help to understand the spread of avian influenza viruses by wild bird migration in China, which benefits for effective monitoring strategies and prevention measures.

  2. Chlamydia in birds - occurrence, new species and zoonotic potential – a review

    Directory of Open Access Journals (Sweden)

    Mitura Agata

    2014-12-01

    Full Text Available Chlamydiales, one of the oldest bacterial orders in evolutionary terms, are widespread among animals. Blinding trachoma, a disease caused by Chlamydia trachomatis, was already known in ancient times, whereas modern reports on psittacosis date from 1879. Though these pathogens have long been known and lead to serious health problems both in human and animals, data on Chlamydiales biology has been limited. It is due to their intracellular life style and complex developmental cycle. New molecular biological methods have been recently developed expanding the possibilities of chlamydial research and diagnosis. This paper reviews data concerning avian chlamydiosis, its aetiological agent C. psittaci, newly proposed species isolated from birds, namely C. ibidis sp. nov., C. avium sp. nov., and C. gallinacea sp. nov., and their zoonotic potential.

  3. Global analysis of biosynthetic gene clusters reveals vast potential of secondary metabolite production in Penicillium species

    DEFF Research Database (Denmark)

    Nielsen, Jens Christian; Grijseels, Sietske; Prigent, Sylvain

    2017-01-01

    Filamentous fungi produce a wide range of bioactive compounds with important pharmaceutical applications, such as antibiotic penicillins and cholesterol-lowering statins. However, less attention has been paid to fungal secondary metabolites compared to those from bacteria. In this study, we...... sequenced the genomes of 9 Penicillium species and, together with 15 published genomes, we investigated the secondary metabolism of Penicillium and identified an immense, unexploited potential for producing secondary metabolites by this genus. A total of 1,317 putative biosynthetic gene clusters (BGCs) were......-referenced the predicted pathways with published data on the production of secondary metabolites and experimentally validated the production of antibiotic yanuthones in Penicillia and identified a previously undescribed compound from the yanuthone pathway. This study is the first genus-wide analysis of the genomic...

  4. Hydroponic Screening of Fast-growing Tree Species for Lead Phytoremediation Potential.

    Science.gov (United States)

    Yongpisanphop, Jiraporn; Babel, Sandhya; Kruatrachue, Maleeya; Pokethitiyook, Prayad

    2017-10-01

    Using trees as phytoremediators has become a powerful tool to remediate lead from contaminated environments. This study aims to identify potential candidates among fast-growing trees by comparing their ability to tolerate and accumulate Pb. Cuttings from Acacia mangium, Azadirachta indica, Eucalyptus camaldulensis, and Senna siamea were cultured in 25% modified Hoagland's solutions supplemented with 10, 30, and 50 mg/L Pb for 15 days. Lead concentrations were determined by a flame atomic absorption spectrophotometer. All species showed high Pb tolerance (over 78%) and low translocation factor (40000 mg/kg) was recorded in A. mangium and E. camaldulensis grown in 50 mg/L Pb solution. Based on high biomass, tolerance index, and Pb content in plants, A. mangium and E. camaldulensis are good candidates for phytoremediation.

  5. Geography, topography, and history affect realized-to-potential tree species richness patterns in Europe

    Science.gov (United States)

    Jens-Christian Svenning; Matthew C. Fitzpatrick; Signe Normand; Catherine H. Graham; Peter B. Pearman; Louis R. Iverson; Flemming. Skov

    2010-01-01

    Environmental conditions and biotic interactions are generally thought to influence local species richness. However, immigration and the evolutionary and historical factors that shape regional species pools should also contribute to determining local species richness because local communities arise by assembly from regional species pools. Using the European tree flora...

  6. Applications of nutrient profiling: potential role in diet-related chronic disease prevention and the feasibility of a core nutrient-profiling system.

    Science.gov (United States)

    Sacks, G; Rayner, M; Stockley, L; Scarborough, P; Snowdon, W; Swinburn, B

    2011-03-01

    A number of different nutrient-profiling models have been proposed and several applications of nutrient profiling have been identified. This paper outlines the potential role of nutrient-profiling applications in the prevention of diet-related chronic disease (DRCD), and considers the feasibility of a core nutrient-profiling system, which could be modified for purpose, to underpin the multiple potential applications in a particular country. The 'Four 'P's of Marketing' (Product, Promotion, Place and Price) are used as a framework for identifying and for classifying potential applications of nutrient profiling. A logic pathway is then presented that can be used to gauge the potential impact of nutrient-profiling interventions on changes in behaviour, changes in diet and, ultimately, changes in DRCD outcomes. The feasibility of a core nutrient-profiling system is assessed by examining the implications of different model design decisions and their suitability to different purposes. There is substantial scope to use nutrient profiling as part of the policies for the prevention of DRCD. A core nutrient-profiling system underpinning the various applications is likely to reduce discrepancies and minimise the confusion for regulators, manufacturers and consumers. It seems feasible that common elements, such as a standard scoring method, a core set of nutrients and food components, and defined food categories, could be incorporated as part of a core system, with additional application-specific criteria applying. However, in developing and in implementing such a system, several country-specific contextual and technical factors would need to be balanced.

  7. Boron stress response and accumulation potential of the extremely tolerant species Puccinellia frigida

    International Nuclear Information System (INIS)

    Rámila, Consuelo d.P.; Contreras, Samuel A.; Di Domenico, Camila; Molina-Montenegro, Marco A.; Vega, Andrea; Handford, Michael; Bonilla, Carlos A.

    2016-01-01

    Highlights: • P. frigida presents an extremely high boron toxicity threshold. • Restricting uptake and internal tolerance mechanisms could confer boron tolerance. • P. frigida is a boron hyperaccumulator over a wide range of concentrations. • The species has potential for phytoremediation purposes. - Abstract: Phytoremediation is a promising technology to tackle boron toxicity, which restricts agricultural activities in many arid and semi-arid areas. Puccinellia frigida is a perennial grass that was reported to hyperaccumulate boron in extremely boron-contaminated sites. To further investigate its potential for phytoremediation, we determined its response to boron stress under controlled conditions (hydroponic culture). Also, as a first step towards understanding the mechanisms underlying its extreme tolerance, we evaluated the presence and expression of genes related with boron tolerance. We found that P. frigida grew normally even at highly toxic boron concentrations in the medium (500 mg/L), and within its tissues (>5000 mg/kg DW). We postulate that the strategies conferring this extreme tolerance involve both restricting boron accumulation and an internal tolerance mechanism; this is consistent with the identification of putative genes involved in both mechanisms, including the expression of a possible boron efflux transporter. We also found that P. frigida hyperaccumulated boron over a wide range of boron concentrations. We propose that P. frigida could be used for boron phytoremediation strategies in places with different soil characteristics and boron concentrations. Further studies should pave the way for the development of clean and low-cost solutions to boron toxicity problems.

  8. Potential enterotoxicity and antimicrobial resistance pattern of Aeromonas species isolated from pet turtles and their environment.

    Science.gov (United States)

    Wimalasena, S H M P; Shin, Gee-Wook; Hossain, Sabrina; Heo, Gang-Joon

    2017-05-23

    To investigate the potential enterotoxicity and antimicrobial resistance of aeromonads from pet turtles as a risk for human infection, one hundred and two Aeromonas spp. were isolated from the feces, skin and rearing environments of pet turtles and identified by biochemical and gyrB sequence analyses. Aeromonas enteropelogenes was the predominant species among the isolates (52.9%) followed by A. hydrophila (32.4%), A. dharkensis (5.9%), A. veronii (4.9%) and A. caviae (3.9%). Their potential enterotoxicities were evaluated by PCR assays for detecting genes encoding cytotoxic enterotoxin (act) and two cytotonic enterotoxins (alt and ast). 75.8% of A. hydrophila isolates exhibited the act + /alt + /ast + genotype, whereas 94.4% of A. enteropelogenes isolates were determined to be act - /alt - /ast - . In an antimicrobial susceptibility test, most isolates were susceptible to all tested antibiotics except amoxicillin, ampicillin, cephalothin, chloramphenicol and tetracycline. Non-susceptible isolates to penicillins (ampicillin and amoxicillin) and fluoroquinolones (ciprofloxacin and norfloxacin) were frequently observed among the A. enteropelogenes isolates. Few isolates were resistant to imipenem, amikacin, ceftriaxone and cefotaxime. Collectively, these results suggest that pet turtles may pose a public health risk of infection by enterotoxigenic and antimicrobial resistant Aeromonas strains.

  9. Antimicrobial Potential of Momordica charantia L. against Multiresistant Standard Species and Clinical Isolates.

    Science.gov (United States)

    Lucena Filho, José Hardman Sátiro de; Lima, Rennaly de Freitas; Medeiros, Ana Claudia Dantas de; Pereira, Jozinete Vieira; Granville-Garcia, Ana Flávia; Costa, Edja Maria Melo de Brito

    2015-11-01

    The aim of the present study was to evaluate the antibacterial and antifungal potential in vitro of Momordica charantia L. against the microorganisms of clinical interest (standard strains and multiresistant isolates) in order to aggregate scientific information in relation to its use as a therapeutic product. M. charantia L. plant material was acquired in municipality of Malta, Paraiba, Brazil. The extract was obtained through maceration, filtration and then concentrated under reduced pressure in a rotary evaporator, resulting in a dough, and was then dried in an oven for 72 hours at 40°C. Antimicrobial action of ethanolic extract of seed M. charantia L. was evaluated based on the minimum inhibitory concentration (MIC), minimum bactericidal concentration (MBC) and minimum fungicidal concentration (MFC) against standard strains of bacteria, isolates multiresistant bacteria and Candida species, by microdilution in broth method. All organisms were sensitive to the extract, being considered strong antimicrobial activity (MIC and MBC/MFC charantia L. showed strong antimicrobial potential, with bactericidal and fungicidal profile, there is the prospect to constitute a new therapeutic strategy for the control of infections, particularly in multiresistant strains. The use of medicinal plants in treatment of infectious processes have an important function nowadays, due to the limitations of the use of synthetic antibiotics available, related specifically to the microbial resistance emergence.

  10. Boron stress response and accumulation potential of the extremely tolerant species Puccinellia frigida

    Energy Technology Data Exchange (ETDEWEB)

    Rámila, Consuelo d.P. [Departamento de Ingeniería Hidráulica y Ambiental, Pontificia Universidad Católica de Chile, Avenida Vicuña Mackenna 4860, 7820436 Santiago (Chile); Contreras, Samuel A.; Di Domenico, Camila [Facultad de Agronomía e Ingeniería Forestal, Pontificia Universidad Católica de Chile, Avenida Vicuña Mackenna 4860, 7820436 Santiago (Chile); Molina-Montenegro, Marco A. [Centro de Estudios Avanzados en Zonas Áridas (CEAZA), Facultad de Ciencias del Mar, Universidad Católica del Norte, Larrondo 1281, Coquimbo (Chile); Instituto de Ciencias Biológicas, Universidad de Talca, Avda. Lircay s/n, Talca (Chile); Vega, Andrea [Facultad de Agronomía e Ingeniería Forestal, Pontificia Universidad Católica de Chile, Avenida Vicuña Mackenna 4860, 7820436 Santiago (Chile); Handford, Michael [Departmento de Biología, Facultad de Ciencias, Universidad de Chile, Avenida Las Palmeras 3425, 7800024 Santiago (Chile); Bonilla, Carlos A. [Departamento de Ingeniería Hidráulica y Ambiental, Pontificia Universidad Católica de Chile, Avenida Vicuña Mackenna 4860, 7820436 Santiago (Chile); Centro de Desarrollo Urbano Sustentable (CEDEUS), Pontificia Universidad Católica de Chile, Avenida Vicuña Mackenna 4860, 7820436 Santiago (Chile); and others

    2016-11-05

    Highlights: • P. frigida presents an extremely high boron toxicity threshold. • Restricting uptake and internal tolerance mechanisms could confer boron tolerance. • P. frigida is a boron hyperaccumulator over a wide range of concentrations. • The species has potential for phytoremediation purposes. - Abstract: Phytoremediation is a promising technology to tackle boron toxicity, which restricts agricultural activities in many arid and semi-arid areas. Puccinellia frigida is a perennial grass that was reported to hyperaccumulate boron in extremely boron-contaminated sites. To further investigate its potential for phytoremediation, we determined its response to boron stress under controlled conditions (hydroponic culture). Also, as a first step towards understanding the mechanisms underlying its extreme tolerance, we evaluated the presence and expression of genes related with boron tolerance. We found that P. frigida grew normally even at highly toxic boron concentrations in the medium (500 mg/L), and within its tissues (>5000 mg/kg DW). We postulate that the strategies conferring this extreme tolerance involve both restricting boron accumulation and an internal tolerance mechanism; this is consistent with the identification of putative genes involved in both mechanisms, including the expression of a possible boron efflux transporter. We also found that P. frigida hyperaccumulated boron over a wide range of boron concentrations. We propose that P. frigida could be used for boron phytoremediation strategies in places with different soil characteristics and boron concentrations. Further studies should pave the way for the development of clean and low-cost solutions to boron toxicity problems.

  11. Analysis of the danger potential of H2/CO-combustion in the event of core meltdown

    International Nuclear Information System (INIS)

    Fischer, M.; Wagler, K.; Schwarzott, W.; Reineke, H.H.

    1987-01-01

    Based on an evaluation of the present state of knowledge and the experiments performed, several computing programs for the simulation of H 2 /CO combustion processes were developed within the scope of this project. Besides the one-compartment-model MOPED, based on the formulation of empirical and phenomenological connections, which was also used later to perform the pressure buildup analyses during various core meltdown (CM) scenarios, these were the first two attempts in respect of a fluid-dynamic description of the combustion processes that also takes the reaction kinetics into account (VERLA code, PISCES code). The analysis of the low (LP) and high (HP) pressure path CM conditions showed that no additional risk arises on the HP path due to potential H 2 combustion. In opposition to this maximum combustion gas fractions of 15% by vol. H 2 and 2.5% by vol. CO with assumption of complete enrichment in the containment result on the LP path. With 37 refs., 3 tabs., 78 figs [de

  12. Biochemical leaf traits as indicators of tolerance potential in tree species from the Brazilian Atlantic Forest against oxidative environmental stressors.

    Science.gov (United States)

    Brandão, Solange E; Bulbovas, Patricia; Lima, Marcos E L; Domingos, Marisa

    2017-01-01

    The tolerance potential against the oxidative injury in native plants from forest ecosystems affected by environmental stressors depends on how efficiently they keep their pro-oxidant/antioxidant balance. Great variations in plant tolerance are expected, highlighting the higher relevance of measuring biochemical leaf trait indicators of oxidative injury in species with similar functions in the forest than in single species. The use of this functional approach seems very useful in the Brazilian Atlantic Forest because it still holds high plant diversity and was the focus of this study. We aimed at determining the tolerance potential of tree species from the Atlantic Forest remnants in SE Brazil against multiple oxidative environmental stressors. We assumed that pioneer tree species are more tolerant against oxidative stress than non-pioneer tree species and that their tolerance potential vary spatially in response to distinct combined effects of oxidative environmental stressors. The study was carried out in three Atlantic Forest remnants, which differ in physiognomy, species composition, climatic characteristics and air pollution exposure. Leaves of three pioneer and three non-pioneer species were collected from each forest remnant during wet (January 2015) and dry periods (June 2015), for analyses of non-enzymatic and enzymatic antioxidants and oxidative injury indicators. Both hypotheses were confirmed. The pioneer tree species displayed biochemical leaf traits (e.g. high levels of ascorbic acid, glutathione and carotenoids and lower lipid peroxidation) that indicate their higher potential tolerance against oxidative environmental stressors than non-pioneer species. The biochemical leaf traits of both successional groups of species varied between the forest remnants, in response to a linear combination of oxidative environmental stressors, from natural (relative humidity and temperature) and anthropogenic sources (ozone and nitrogen dioxide). Copyright © 2016

  13. Apoptotic potential of two Caryophyllaceae species in MCF-7 and MDA-MB-468 cell lines

    Directory of Open Access Journals (Sweden)

    M. Mosaddegh

    2018-01-01

    Full Text Available Background and objectives: Plants have been used to treat diseases like cancer for many years and today the trend towards their use is increasing. One of the most effective mechanisms of plants against cancer is inducing apoptosis. Apoptosis is a programmed cell death which acts opposite to cell division. It starts in response to some stimuli. Despite the effectiveness of apoptosis inducing agents, their use has been limited due to side effects and resistance to these treatments; so, applying medicinal herbs due to their lower cost and toxicity has drawn attentions. Recent research at the Traditional Medicine and Materia Medica Research Center, Shahid Beheshti University of Medical Sciences on two medicinal plants Acanthophyllum bracteatum and A. microcephalum has shown cytotoxic effects of these two species, but the mechanism of their toxicity has remained unknown; thus, the present study was designed to evaluate the apoptotic potential of Acanthophyllum bracteatum and A. microcephalum. Methods: In the present study, the cytotoxic effects of the methanol extract of Acanthophyllum bracteatum and A. microcephalum was evaluated against MCF-7 and MDA-MB-468 cells by MTT assay; furthermore, their apoptosis potential has been evaluated by annexin-V/propidium iodide assay and Hoechst 33258 staining in the same cell lines. Results: The methanol extract of A. microcephalum and A. bracteatum showed cytotoxic effects against MCF-7 and MDA-MB-468 cell lines with IC50 values of 64, 159 and 102, 250 μg/mL, respectively. The results of the apoptosis assays confirmed the potential of the two plants extracts to induce apoptosis in both cell lines while A. microcephalum demonstrated more considerable results. Conclusion: A. microcephalum could be a suitable choice for further breast cancer studies.

  14. Investigation of toxigenic potential of fungal species by the use of simple screening method

    Directory of Open Access Journals (Sweden)

    Bočarov-Stančić Aleksandra S.

    2009-01-01

    Full Text Available Potential for the biosynthesis of aflatoxin B1 (AFLB1, ochratoxin A (OTA, diacetoxyscirpenol (DAS, T-2 toxin (T2, and zearalenone (ZON was investigated in different fungal species belonging to the genera: Aspergillus, Fusarium and Penicillium. The majority of investigated isolates originated from cereal grains, crushed oil soybean seed and fodder mixtures. The simple screening method developed by Filtenborg et al. (1983 was applied with few modifications concerning the type of the medium and cultivation temperature. In order to optimise the biosynthetic conditions for different mycotoxins, the following control cultures, known as mycotin producers were used: OTA - A. ochraceus CBS 108.08, DAS - F. semitectum (SL-B i SL-C, T2 - F. sporotrichioides (ITM-391, M-1-1, R-2301 and ZON - F. graminearum (GZ-LES. The fungi were cultivated on the standard medium (YESA - 2% yeast extract, 15% sucrose and 2% agar, pH 6.5, three modifications of the basic medium (YESAZn - the standard medium supplemented with 0.23 mg/l ZnSO4 x 5 H2O; PPSA - the medium in which yeast extract was replaced with peptone-1; PPSAZn - the medium in which yeast extract was replaced with peptone-1 and supplemented with 0.23 mg/l ZnSO4 x 5 H2O, and the potato-dextrose agar (PDA. The earlier biosynthesis of tested mycotoxins was recorded under the following cultivation conditions of fungal species: AFLB1 - after 14 days on PDA at 27±1°C, OTA - after 10 days on YESA and YESAZn at 27±1°C, DAS - after 10 days on PPSA and PPSAZn at 27±1°C, T2 - after 7 days on PPSAZn and PPSA at room temperature (20-24°C, and ZON - after 1 week on YESA and YESAZn at room temperature (21-24°C.

  15. Carbon sequestration rate and aboveground biomass carbon potential of three young species in lower Gangetic plain.

    Science.gov (United States)

    Jana, Bipal K; Biswas, Soumyajit; Majumder, Mrinmoy; Roy, Pankaj K; Mazumdar, Asis

    2011-07-01

    Carbon is sequestered by the plant photosynthesis and stored as biomass in different parts of the tree. Carbon sequestration rate has been measured for young species (6 years age) of Shorea robusta at Chadra forest in Paschim Medinipur district, Albizzia lebbek in Indian Botanic Garden in Howrah district and Artocarpus integrifolia at Banobitan within Kolkata in the lower Gangetic plain of West Bengal in India by Automated Vaisala Made Instrument GMP343 and aboveground biomass carbon has been analyzed by CHN analyzer. The specific objective of this paper is to measure carbon sequestration rate and aboveground biomass carbon potential of three young species of Shorea robusta, Albizzia lebbek and Artocarpus integrifolia. The carbon sequestration rate (mean) from the ambient air during winter season as obtained by Shorea robusta, Albizzia lebbek and Artocarpus integrifolia were 11.13 g/h, 14.86 g/h and 4.22g/h, respectively. The annual carbon sequestration rate from ambient air were estimated at 8.97 t C ha(-1) by Shorea robusta, 11.97 t C ha(-1) by Albizzia lebbek and 3.33 t C ha(-1) by Artocarpus integrifolia. The percentage of carbon content (except root) in the aboveground biomass of Shorea robusta, Albizzia lebbek and Artocarpus integrifolia were 47.45, 47.12 and 43.33, respectively. The total aboveground biomass carbon stock per hectare as estimated for Shorea robusta, Albizzia lebbek and Artocarpus integrifolia were 5.22 t C ha(-1) , 6.26 t C ha(-1) and 7.28 t C ha(-1), respectively in these forest stands.

  16. Armillaria species: Primary drivers of forest ecosystem processes and potential impacts of climate change

    Science.gov (United States)

    Ned B. Klopfenstein; Mee-Sook Kim; John W. Hanna; Amy L. Ross-Davis; Sara M. Ashiglar; Geral I. McDonald

    2012-01-01

    Species of the fungal genus Armillaria are pervasive in forest soils and are associated with widely ranging tree species of diverse forests worldwide (Baumgartner et al., 2011). As primary decay drivers of ecosystem processes, Armillaria species exhibit diverse ecological behaviors, ranging from virulent root and/or butt pathogens of diverse woody hosts, such as timber...

  17. Comparative "Omics" of the Fusarium fujikuroi Species Complex Highlights Differences in Genetic Potential and Metabolite Synthesis

    NARCIS (Netherlands)

    Niehaus, E.-M.; Münsterkötter, M.; Proctor, R.H.; Brown, D.W.; Sharon, A.; Idan, Y.; Oren-Young, L.; Sieber, C.M.; Novák, O.; Pěnčík, A.; Tarkowská, D.; Hromadová, K.; Freeman, S.; Maymon, M.; Elazar, M.; Youssef, S.A.; El-Shabrawy, E.S.M.; Shalaby, A.B.A.; Houterman, P.; Brock, N.L.; Burkhardt, I.; Tsavkelova, E.A.; Dickschat, J.S.; Galuszka, P.; Güldener, U.; Tudzynski, B.

    2016-01-01

    Species of the Fusarium fujikuroi species complex (FFC) cause a wide spectrum of often devastating diseases on diverse agricultural crops, including coffee, fig, mango, maize, rice, and sugarcane. Although species within the FFC are difficult to distinguish by morphology, and their genes often share

  18. Distribution and mycotoxigenic potential of Aspergillus section Nigri species in naturally-contaminated almonds

    Science.gov (United States)

    In a previous study, inedible almond pick-out samples were assayed for aflatoxin and aflatoxigenic Aspergillus species. These samples were observed to contain high populations of black-spored Aspergillus section Nigri species. To investigate whether these species may contribute to the total potent...

  19. Modelling the potential spatial distribution of mosquito species using three different techniques

    NARCIS (Netherlands)

    Cianci, D.; Hartemink, N.; Ibáñez-Justicia, A.

    2015-01-01

    Background: Models for the spatial distribution of vector species are important tools in the assessment of the risk of establishment and subsequent spread of vector-borne diseases. The aims of this study are to define the environmental conditions suitable for several mosquito species through species

  20. Comparison of the effects of temperature and water potential on seed germination of Fabaceae species from desert and subalpine grassland.

    Science.gov (United States)

    Hu, Xiao Wen; Fan, Yan; Baskin, Carol C; Baskin, Jerry M; Wang, Yan Rong

    2015-05-01

    Temperature and water potential for germination based on the thermal and hydrotime models have been successfully applied in predicting germination requirements of physiologically dormant seeds as well as nondormant seeds. However, comparative studies of the germination requirements of physically dormant seeds from different ecosystems have not been done. Germination of scarified seeds of four legume species collected from the Qing-Tibetan Plateau and of four collected in the Alax Desert in China was compared over a range of temperatures and water potentials based on thermal time and hydrotime models. Seeds of species from the Qing-Tibetan Plateau had a lower base temperature (T b) and optimal temperature (T o) for germination than those from the Alax Desert. Seeds of the four species from the Qing-Tibetan Plateau germinated to high percentages at 5°C, whereas none of the four desert species did so. Seeds of species from the Alax Desert germinated to a high percentage at 35°C or 40°C, while no seeds of species from the Qing-Tibetan Plateau germinated at 35°C or 40°C. The base median water potential [Ψ b(50)] differed among species but not between the two habitats. The thermal time and hydrotime models accurately predicted the germination time course of scarified seeds of most of the eight species in response to temperature and water potential; thus, they can be useful tools in comparative studies on germination of seeds with physical dormancy. Habitat temperatures but not rainfall is closely related to germination requirements of these species. © 2015 Botanical Society of America, Inc.

  1. Spatial assessment of the potential risk of avian influenza A virus infection in three raptor species in Japan

    Science.gov (United States)

    MORIGUCHI, Sachiko; ONUMA, Manabu; GOKA, Koichi

    2016-01-01

    Avian influenza A, a highly pathogenic avian influenza, is a lethal infection in certain species of wild birds, including some endangered species. Raptors are susceptible to avian influenza, and spatial risk assessment of such species may be valuable for conservation planning. We used the maximum entropy approach to generate potential distribution models of three raptor species from presence-only data for the mountain hawk-eagle Nisaetus nipalensis, northern goshawk Accipiter gentilis and peregrine falcon Falco peregrinus, surveyed during the winter from 1996 to 2001. These potential distribution maps for raptors were superimposed on avian influenza A risk maps of Japan, created from data on incidence of the virus in wild birds throughout Japan from October 2010 to March 2011. The avian influenza A risk map for the mountain hawk-eagle showed that most regions of Japan had a low risk for avian influenza A. In contrast, the maps for the northern goshawk and peregrine falcon showed that their high-risk areas were distributed on the plains along the Sea of Japan and Pacific coast. We recommend enhanced surveillance for each raptor species in high-risk areas and immediate establishment of inspection systems. At the same time, ecological risk assessments that determine factors, such as the composition of prey species, and differential sensitivity of avian influenza A virus between bird species should provide multifaceted insights into the total risk assessment of endangered species. PMID:26972333

  2. Core top confirmation of the carbonate ion effect in multiple species of planktic foraminifera and a reassessment of the upper water column equatorial Pacific δ13CFORAM records.

    Science.gov (United States)

    Fehrenbacher, J. S.; Spero, H. J.

    2017-12-01

    Planktic foraminifera carbon (δ13CFORAM) and oxygen (δ18OFORAM) isotope records play a vital role in paleoceanographic reconstructions. The δ18OFORAM values are typically minimally offset from equilibrium δ18O-calcite and are widely applied in oceanographic reconstructions of upper water column hydrography. In contrast, δ13CFORAM are underutilized in paleoceanographic reconstructions. δ13CFORAM are more difficult to interpret due to species-specific δ13CFORAM offsets from the δ13C of the dissolved inorganic carbon of seawater (δ13CDIC). In this study, we analyzed the δ18OFORAM and δ13CFORAM of individual foraminifera shells from a suite of planktic foraminifer species obtained from core top (Holocene) intervals from Eastern Equatorial Pacific (TR163-19), Western Caribbean (ODP 999A), and Equatorial Indian Ocean (ODP 714A) cores. We also include published records from the Western Equatorial Pacific (MW91-9 15GGC). We find the δ13CFORAM offsets from the local water column δ13CDIC are large, variable, region specific, and are correlated to the ambient carbonate ion concentration ([CO32-]) of seawater. We show that the regional offsets from δ13CDIC are due to the carbonate ion effect (CIE) on δ13CFORAM (Spero et al., 1997; Bijma et al., 1999) and variations in water column [CO32-]. More importantly, our results demonstrate that regional and/or culture based δ13CFORAM offsets from δ13CDIC are not applicable globally. Rather, owing to regional differences in water column [CO32-] and species-specific relationships between [CO32-] and δ13CFORAM, δ13CFORAM must be corrected for the regional CIE in order to infer vertical δ13CDIC gradients or to compare δ13CFORAM records from one region to another. Laboratory culture suggests the carbonate ion effect on δ18OFORAM is 1/3 that of δ13CFORAM (Spero et al., 1997). Thus, in order to obtain correct δ18OFORAM temperatures or δ18OSW (when used in conjunction with Mg/Ca) the δ18OFORAM offsets from δ18

  3. Calibrating snakehead diversity with DNA barcodes: expanding taxonomic coverage to enable identification of potential and established invasive species.

    Directory of Open Access Journals (Sweden)

    Natasha R Serrao

    Full Text Available Detecting and documenting the occurrence of invasive species outside their native range requires tools to support their identification. This can be challenging for taxa with diverse life stages and/or problematic or unresolved morphological taxonomies. DNA barcoding provides a potent method for identifying invasive species, as it allows for species identification at all life stages, including fragmentary remains. It also provides an efficient interim taxonomic framework for quantifying cryptic genetic diversity by parsing barcode sequences into discontinuous haplogroup clusters (typical of reproductively isolated species and labelling them with unique alphanumeric identifiers. Snakehead fishes are a diverse group of opportunistic predators endemic to Asia and Africa that may potentially pose significant threats as aquatic invasive species. At least three snakehead species (Channa argus, C. maculata, and C. marulius are thought to have entered North America through the aquarium and live-food fish markets, and have established populations, yet their origins remain unclear. The objectives of this study were to assemble a library of DNA barcode sequences derived from expert identified reference specimens in order to determine the identity and aid invasion pathway analysis of the non-indigenous species found in North America using DNA barcodes. Sequences were obtained from 121 tissue samples representing 25 species and combined with public records from GenBank for a total of 36 putative species, which then partitioned into 49 discrete haplogroups. Multiple divergent clusters were observed within C. gachua, C. marulius, C. punctata and C. striata suggesting the potential presence of cryptic species diversity within these lineages. Our findings demonstrate that DNA barcoding is a valuable tool for species identification in challenging and under-studied taxonomic groups such as snakeheads, and provides a useful framework for inferring invasion pathway

  4. Hippobosca longipennis - a potential intermediate host of a species of Acanthocheilonema in dogs in northern India

    Directory of Open Access Journals (Sweden)

    Irwin Peter J

    2011-07-01

    Full Text Available Abstract Background Hippobosca longipennis (the 'dog louse fly' is a blood sucking ectoparasite found on wild carnivores such as cheetahs and lions and domesticated and feral dogs in Africa, the Middle East and Asia, including China. Known as an intermediate host for Acanthocheilonema dracunculoides and a transport host for Cheyletiella yasguri, it has also been suggested that H. longipennis may be a vector for other pathogens, including Acanthocheilonema sp.? nov., which was recently reported to infect up to 48% of dogs in northern India where this species of fly is known to commonly infest dogs. To test this hypothesis, hippoboscid flies feeding on dogs in Ladakh in northern India were collected and subjected to microscopic dissection. Results A total of 12 infective larvae were found in 10 out of 65 flies dissected; 9 from the head, 2 from the thorax and 1 from the abdomen. The larvae averaged 2, 900 (± 60 μm in length and 34 (± 5 μm in width and possessed morphological features characteristic of the family Onchocercidae. Genetic analysis and comparison of the 18S, ITS-2, 12S and cox-1 genes confirmed the identity of the larvae as the Acanthocheilonema sp.? nov. reported in dogs in Ladakh. Conclusion This study provides evidence for a potential intermediate host-parasite relationship between H. longipennis and the canine Acanthocheilonema sp.? nov. in northern India.

  5. Investigating the potential of thermophilic species for ethanol production from industrial spent sulfite liquor

    Directory of Open Access Journals (Sweden)

    Michaela Weissgram

    2015-10-01

    Full Text Available Thermophilic microorganisms hold a great potential for bioethanol production on waste biomass, due to their ability to utilize pentoses and hexoses alike. However, to date hardly any data on thermophiles growing directly on industrial substrates like spent sulfite liquor (SSL are available. This contribution investigates the ability of Thermoanaerobacter species to utilize the main sugars in the used SSL (mannose, glucose and xylose and the effect of process parameters (pH, temperature and sugar concentration on their growth. Based on these results the strain T. mathranii was chosen for further studies. The ability of T. mathranii to grow directly on SSL was investigated and the effect of several inhibiting substances on growth was elucidated. Furthermore it was tested whether pretreatment with activated charcoal can increase the fermentability of SSL. The fermentations were evaluated based on yields and specific rates. It could be shown that T. mathranii was able to ferment all sugars in the investigated softwood SSL and fermented diluted, untreated SSL (up to 2.7% (w/w dry matter. Pretreatment with activated charcoal could slightly reduce the amount of phenols in the substrate and thus facilitate growth and ethanol production on higher SSL concentrations (up to 4.7% (w/v dry matter. Ethanol yields of 0.29-0.44 Cmmol of ethanol per Cmmol sugar were obtained on untreated and pretreated spent sulfite liquor, respectively. These results on an industrial substrate strengthen the claim that thermophilic microorganisms might be the optimal candidates for forest biorefinery.

  6. The Role of Reactive Oxygen Species and Autophagy in Periodontitis and Their Potential Linkage

    Directory of Open Access Journals (Sweden)

    Chengcheng Liu

    2017-06-01

    Full Text Available Periodontitis is a chronic inflammatory disease that causes damage to periodontal tissues, which include the gingiva, periodontal ligament, and alveolar bone. The major cause of periodontal tissue destruction is an inappropriate host response to microorganisms and their products. Specifically, a homeostatic imbalance between reactive oxygen species (ROS and antioxidant defense systems has been implicated in the pathogenesis of periodontitis. Elevated levels of ROS acting as intracellular signal transducers result in autophagy, which plays a dual role in periodontitis by promoting cell death or blocking apoptosis in infected cells. Autophagy can also regulate ROS generation and scavenging. Investigations are ongoing to elucidate the crosstalk mechanisms between ROS and autophagy. Here, we review the physiological and pathological roles of ROS and autophagy in periodontal tissues. The redox-sensitive pathways related to autophagy, such as mTORC1, Beclin 1, and the Atg12-Atg5 complex, are explored in depth to provide a comprehensive overview of the crosstalk between ROS and autophagy. Based on the current evidence, we suggest that a potential linkage between ROS and autophagy is involved in the pathogenesis of periodontitis.

  7. Potential effects of the invasive species Gracilaria vermiculophylla on Zostera marina metabolism and survival.

    Science.gov (United States)

    Martínez-Lüscher, Johann; Holmer, Marianne

    2010-06-01

    The potential threat to seagrasses of the invasive algae, Gracilaria vermiculophylla was assessed through metabolic indicators under experimental conditions. Net leaf photosynthesis (LNP) and dark respiration (LDR) were measured from leaf segments of Zostera marina shoots under different loads of G. vermiculophylla (control, low 2.2kg FW m(-2) and high 4kg FW m(-2)) in mesocosm experiments separated in tanks at four temperatures (19, 23.5, 26 and 30 degrees C). LNP decreased in the presence of the high density G. vermiculophylla mat (25% on average), being the most severe reductions at 30 degrees C (35% less in high). LDR did not respond significantly to differences in algal biomass, whereas a progressive increase was found with increasing temperatures (3.4 times higher at 30 degrees C than at 19 degrees C). Sulphide in porewater was measured weekly in order clarify the role of sediment conditions on seagrass metabolism, and increased both with algal biomass (29% in high) and temperature (from 0.5mM at 26 degrees C to 2.6mM at 30 degrees C), but changes in LNP and LDR were not correlated with sulphide concentrations. Seagrass survival rates showed decreasing trend with algal biomass at all the temperatures (from 74% to 21% survival). G. vermiculophylla showed harmful effects on Z. marina metabolism and survival with synergistic effects of temperature suggesting greater impact of invasive species under future higher water temperatures.

  8. Quantifying potential propagule pressure of aquatic invasive species from the commercial shipping industry in Canada.

    Science.gov (United States)

    Lo, Veronica B; Levings, Colin D; Chan, Kai M A

    2012-02-01

    We quantify and compare different measures of potential propagule pressure (PPP) of aquatic invasive species (AIS) from commercial vessels in Canada. We used ship arrivals and ballast water discharge volumes as proxies for PPP from ballast water organisms, and wetted surface area (WSA) as a proxy for hull fouling PPP, to determine their relative contributions to total PPP. For three regions studied, PPP proxies correlated significantly across ports and some vessel categories. Relative contributions of ship arrivals, ballast discharge, and WSAs to PPP, evidenced by non-significant correlations across these measures, varied across regions, ports, vessel types, and seasons. Flow-through (dominant on east and west coasts) and empty-refill (in Great Lakes-St. Lawrence region) were the major ballast water exchange methods employed by the vessels surveyed. These methods have different biological efficacy for AIS removal, influencing PPP. Our study illustrates benefits and limitations of using different PPP proxies to estimate invasion risk. Copyright © 2011 Elsevier Ltd. All rights reserved.

  9. Iron(III) species formed during iron(II) oxidation and iron-core formation in bacterioferritin of Escherichia coli

    International Nuclear Information System (INIS)

    Hawkins, C.; Treffry, A.; Mackey, J.; Williams, J.M.; Andrews, S.C.; Guest, J.R.; Harrison, P.M.

    1996-01-01

    This paper describes a preliminary investigation of the mechanisms of Fe(II) oxidation and storage of Fe(III) in the bacterioferritin of Escherichia coli (EcBFR). Using Moessbauer spectroscopy to examine the initial oxidation of iron by EcBFR it is confirmed that this ferritin exhibits 'ferroxidase' activity and is shown that dimeric and monomeric iron species are produced as intermediates. The characteristics of ferroxidase activity in EcBFR is compare d with those of human H-chain ferritin (HuHF) and discuss the different Moessbauer parameters of their dimeric iron with reference to the structures of their di-metal sites. In addition, it is presented preliminary findings suggesting that after an initial 'burst', the rate of oxidation is greatly reduced, possibly due to blockage of the ferroxidase centre by bound iron. A new component, not found in HuHF and probably representing a small cluster of Fe(III) atoms, is reported

  10. Phlebotomine sand flies (Diptera, Psychodidae from Rio de Janeiro State, Brazil: species distribution and potential vectors of leishmaniases

    Directory of Open Access Journals (Sweden)

    Bruno Moreira Carvalho

    2014-03-01

    Full Text Available Phlebotomine sand flies (Diptera, Psychodidae from Rio de Janeiro State, Brazil: Species distribution and potential vectors of leishmaniases. Rio de Janeiro State, in Brazil, has endemic areas of both cutaneous and visceral leishmaniases. In these areas, entomologic surveillance actions are highly recommended by Brazil's Ministry of Health. The present work describes the results of sand fly captures performed by the Health Department of Rio de Janeiro State between 2009 and 2011 in several municipalities. An updated species list and distribution of phlebotomine sand flies in the state are provided based on an extensive literature review. Currently, the sand fly fauna of Rio de Janeiro State has 65 species, belonging to the genera Brumptomyia (8 spp. and Lutzomyia (57 spp.. Distribution maps of potential leishmaniases vector species Lutzomyia (Nyssomyia intermedia, L. migonei, L. (N. whitmani, L. (N. flaviscutellata and L. (Lutzomyia longipalpis are provided and their epidemiological importance is discussed.

  11. Plant species potentially suitable for cover on low-level solid nuclear waste disposal sites: a literature review

    International Nuclear Information System (INIS)

    Brenkert, A.L.; Parr, P.D.; Taylor, F.G.

    1984-09-01

    This report reviews available literature on soil conditions, hydrology, and climatological data and suggests plant species suitable for covering the low-level nuclear waste disposal areas in the White Oak Creek Watershed within the Oak Ridge Reservation. Literature on naturally invading species and secondary succession, on plant species used for reclamation of coal spoils and roadsides, and on horticultural species is reviewed. The potential of plant species to take up, or mine, the waste through deep rooting is assessed. The effects of vegetation cover on the water balance in a watershed are reviewed. Several conclusions are presented concerning the management of vegetation cover on low-level solid waste disposal areas. 163 references, 2 figures, 9 tables

  12. Plant species potentially suitable for cover on low-level solid nuclear waste disposal sites: a literature review

    Energy Technology Data Exchange (ETDEWEB)

    Brenkert, A.L.; Parr, P.D.; Taylor, F.G.

    1984-09-01

    This report reviews available literature on soil conditions, hydrology, and climatological data and suggests plant species suitable for covering the low-level nuclear waste disposal areas in the White Oak Creek Watershed within the Oak Ridge Reservation. Literature on naturally invading species and secondary succession, on plant species used for reclamation of coal spoils and roadsides, and on horticultural species is reviewed. The potential of plant species to take up, or mine, the waste through deep rooting is assessed. The effects of vegetation cover on the water balance in a watershed are reviewed. Several conclusions are presented concerning the management of vegetation cover on low-level solid waste disposal areas. 163 references, 2 figures, 9 tables.

  13. Entomopathogenic Potential of Verticillium and Acremonium Species (Deuteromycotina: Hyphomycetes)

    DEFF Research Database (Denmark)

    Steenberg, Tove; Humber, Richard A

    1999-01-01

    their entomopathogenicity. A test was also conducted with a coleopteran (lesser mealworm, Alphitobius diaperinus) to further evaluate the host range for some of the fungi. V. lamellicola was not pathogenic to the two species of insects treated, while varying levels of pathogenicity were shown for the other species....... In general, V. lecanii was the most pathogenic species. Immature whiteflies appeared to be more susceptible to fungal infection than adult houseflies, and the host range for several of the fungi also included lesser mealworm....

  14. REVIEW:Species diversity of indigenous fruits in Indonesia and its potential.

    Directory of Open Access Journals (Sweden)

    TAHAN UJI

    2007-04-01

    Full Text Available Indonesia is rich of species diversity of indigenous fruits. The results of study reported that there are 266 species of indigenous fruits encountered in Indonesia and 62 species of them are cultivated. Four genera of indigenous fruits are recommended to developed in Indonesia, i.e. Durio, Mangifera, Garcinia and Nephelium. This study also reported that duku (Lansium domesticum, salak (Salacca zalacca, buah merah (Pandanus conoideus, and matoa (Pometia pinnata have a good prospect also to be developed in Indonesia.

  15. Occurrence of potentially toxigenic mould species in fresh salads of different kinds of ready-for-use vegetables

    Directory of Open Access Journals (Sweden)

    Kocić-Tanackov Sunčica D.

    2010-01-01

    Full Text Available In the mycological survey of fresh salads of different vegetables, the collected samples were tested for total counts of moulds with special attention paid to the presence of potentially toxigenic species. The survey also included the isolation and the identification of species, as well as the evaluation of mycotoxin biosynthesis ability of potential producers of ochratoxin A (OA and sterigmatocystin (STC. Mould counts ranged from 10.0 to 4.7x102 cfu g-1. The most common moulds found in fresh salads were Cladosporium (42.89%, Penicillium (25.78%, Aspergillus (14.67% and Alternaria (6.89%. C. cladosporioides (40.44%, followed by A. niger (10.22%, P. aurantiogriseum (7.55%, A. alternata (6.89% and Fusarium spp. (3.11% were the most dominating species. Other species were represented with 2.22% (Eurotium spp., 1.56% (Botrytis spp., 0.67% (Phoma spp., 0.44% (Geotrichum spp., Mucor spp., Phialophora spp. and 0.22% (Emericella spp., Paecilomyces spp., Trichoderma spp., Xeromyces spp.. Twenty-two of 41 identified mould species were potentially toxigenic, which accounted for 46.18% of the total isolated population. The most frequent were the potential producers of ochratoxin A (17.77%. Potential producers of moniliformin were isolated in 3.11% of samples, while producers of fumonisin and STC were found in 2.67% and 2.44% of samples, respectively. The tested isolates of OA producers did not demonstrate the ability to biosynthetise this mycotoxins, but two out of five isolates of A. versicolor were found to biosynthesise STC in doses of 109.2 ng mL-1 and 56.3 ng mL-1. The obtained results indicate that such products may threaten human health, considering that isolated species were potentially toxigenic, while isolates of A. versicolor also biosynthesised STS.

  16. Comparative “Omics” of the Fusarium fujikuroi Species Complex Highlights Differences in Genetic Potential and Metabolite Synthesis

    Science.gov (United States)

    Niehaus, Eva-Maria; Münsterkötter, Martin; Proctor, Robert H.; Brown, Daren W.; Sharon, Amir; Idan, Yifat; Oren-Young, Liat; Sieber, Christian M.; Novák, Ondřej; Pěnčík, Aleš; Tarkowská, Danuše; Hromadová, Kristýna; Freeman, Stanley; Maymon, Marcel; Elazar, Meirav; Youssef, Sahar A.; El-Shabrawy, El Said M.; Shalaby, Abdel Baset A.; Houterman, Petra; Brock, Nelson L.; Burkhardt, Immo; Tsavkelova, Elena A.; Dickschat, Jeroen S.; Galuszka, Petr; Güldener, Ulrich; Tudzynski, Bettina

    2016-01-01

    Species of the Fusarium fujikuroi species complex (FFC) cause a wide spectrum of often devastating diseases on diverse agricultural crops, including coffee, fig, mango, maize, rice, and sugarcane. Although species within the FFC are difficult to distinguish by morphology, and their genes often share 90% sequence similarity, they can differ in host plant specificity and life style. FFC species can also produce structurally diverse secondary metabolites (SMs), including the mycotoxins fumonisins, fusarins, fusaric acid, and beauvericin, and the phytohormones gibberellins, auxins, and cytokinins. The spectrum of SMs produced can differ among closely related species, suggesting that SMs might be determinants of host specificity. To date, genomes of only a limited number of FFC species have been sequenced. Here, we provide draft genome sequences of three more members of the FFC: a single isolate of F. mangiferae, the cause of mango malformation, and two isolates of F. proliferatum, one a pathogen of maize and the other an orchid endophyte. We compared these genomes to publicly available genome sequences of three other FFC species. The comparisons revealed species-specific and isolate-specific differences in the composition and expression (in vitro and in planta) of genes involved in SM production including those for phytohormome biosynthesis. Such differences have the potential to impact host specificity and, as in the case of F. proliferatum, the pathogenic versus endophytic life style. PMID:28040774

  17. Mansonella, including a Potential New Species, as Common Parasites in Children in Gabon.

    Directory of Open Access Journals (Sweden)

    Gaël Mourembou

    Full Text Available Like other tropical African countries, Gabon is afflicted by many parasitic diseases, including filariases such as loiasis and mansonellosis. This study aimed to assess the prevalence of these two filarial diseases in febrile and afebrile children using quantitative real-time PCR and standard PCR assays coupled with sequencing.DNA from blood specimens of 1,418 Gabonese children (1,258 febrile and 160 afebrile were analyzed. Overall, filarial DNA was detected in 95 (6.7% children, including 67 positive for M. perstans (4.7%, which was the most common. M. perstans was detected in 61/1,258 febrile children (4.8% and 6/160 afebrile children (3.8%, P = 0.6. Its prevalence increased statistically with age: 3.5%, 7.7% and 10.6% in children aged ≤ 5, 6-10 and 11-15 years, respectively. M. perstans prevalence was significantly higher in Koulamoutou and Lastourville (12% and 10.5%, respectively than in Franceville and Fougamou (2.6% and 2.4%, respectively. Loa loa was detected in seven febrile children including one co-infection with M. perstans. Finally, 21 filarial DNA positive were negative for M. perstans and Loa loa, but ITS sequencing could be performed for 12 and allowed the identification of a potential new species of Mansonella provisionally called "DEUX". Mansonella sp. "DEUX" was detected only in febrile children.Further study should be performed to characterize Mansonella sp. "DEUX" and evaluate the clinical significance of mansonellosis in humans.

  18. Anti-insect potential of lectins from Arisaema species towards Bactrocera cucurbitae.

    Science.gov (United States)

    Kaur, Manpreet; Singh, Kuljinder; Rup, Pushpinder J; Kamboj, Sukhdev Singh; Singh, Jatinder

    2009-11-01

    Bactrocera cucurbitae (Coquillett), also known as melon fruit fly, is one of the major insect pests of cucurbits in several parts of Asia, Africa and Pacific. In the present investigation, effect of lectins from two sources i.e. Arisaema intermedium Blume and Arisaema wallichianum Hook f. (Family-Araceae) has been studied on the development of second instar larvae of melon fruit fly. The lectins were incorporated separately in artificial diet at a concentration of 10 to 160 microg ml(-1) and fed adlibitum to the second instar larvae. Both the lectins were found to prolong the development period and significantly inhibited the pupation and emergence in a dose dependent manner. Total development period was found to be prolonged by 3.5 and 2.3 days in case of larvae fed on artificial diet containing A. intermedium (AIL) and A. wallichianum (AWL), respectively. LC50 values calculated on the basis of adult emergence came out to be 32.8 and 29 microg ml(-1) for AIL and AWL, respectively. Both the lectins tested, were found to increase the activity of esterases as larvae proceeded from 24 to 72 hr of treatment. The activity of acid phosphatase decreased significantly in larvae reared on diet containing LC50 of AIL, while in case of AWL significant decrease was observed only at 72 hr of treatment. Alkaline phosphatase activity decreased significantly on treatment with both of these lectins. These results showed that AIL and AWL have promising anti-insect potential. So, lectin gene/s from either of these species can be cloned and subsequently can be employed to develop transgenics to control melon fruit flies specifically and insect pests in general. This approach could be used as a part of Integrated pest management (IPM) strategies.

  19. Developing thresholds of potential concern for invasive alien species: Hypotheses and concepts

    Directory of Open Access Journals (Sweden)

    Llewellyn C. Foxcroft

    2009-03-01

    Conservation implication: In accepting that species and systems are variable, and that flux is inevitable and desirable, these TPCs developed for invasive alien species specifi cally, provide end points against which monitoring can be assessed. Once a threshold is reached, the cause of the threshold being exceeded is examined and management interventions recommended.

  20. Determining habitat potential and surveying for nine rare plant species in south-central Utah

    Science.gov (United States)

    Deborah J. Clark; Christine M. Groebner

    2001-01-01

    In south-central Utah, lands within and adjacent to Capitol Reef National Park contain populations of nine rare plant species. In an effort to enhance the combined knowledge about these species, the Bureau of Land Management, the USDA Forest Service, and the National Park Service signed an Interagency Agreement and hired an interagency biologist and field crew to...

  1. Meiotic behavior of wild Caricaceae species potentially suitable for papaya improvement

    Directory of Open Access Journals (Sweden)

    Emanuelli Narducci da Silva

    2012-01-01

    Full Text Available The purpose of this study was to evaluate the meiotic behavior and determine the meiotic index and pollen viability of representative plants of the wild species V. goudotiana, V. quercifolia and J. spinosa. Meiotic analysis confirmed that the species are diploid and have 18 chromosomes. Meiosis was partially normal, since some abnormalities, e.g, sticky and lagging chromosomes, precocious segregation, lack of synchrony, and disturbances in the spindle fibers were observed. These abnormalities resulted in post-meiotic products (monads, dyads, triads, and polyads that probably contributed to the meiotic index of 85.7 % (V. goudotiana to 95.9 % (J. spinosa; significant variation was observed in the species V. goudotiana. The pollen viability of 68.0% (V. goudotiana to 96.0 % (J. spinosa was reasonably good in these wild species. Crossings in breeding programs involving V. goudotiana should therefore be carefully planned, since part of the gametes of this species is unviable.

  2. Genome-wide resequencing of KRICE_CORE reveals their potential for future breeding, as well as functional and evolutionary studies in the post-genomic era.

    Science.gov (United States)

    Kim, Tae-Sung; He, Qiang; Kim, Kyu-Won; Yoon, Min-Young; Ra, Won-Hee; Li, Feng Peng; Tong, Wei; Yu, Jie; Oo, Win Htet; Choi, Buung; Heo, Eun-Beom; Yun, Byoung-Kook; Kwon, Soon-Jae; Kwon, Soon-Wook; Cho, Yoo-Hyun; Lee, Chang-Yong; Park, Beom-Seok; Park, Yong-Jin

    2016-05-26

    Rice germplasm collections continue to grow in number and size around the world. Since maintaining and screening such massive resources remains challenging, it is important to establish practical methods to manage them. A core collection, by definition, refers to a subset of the entire population that preserves the majority of genetic diversity, enhancing the efficiency of germplasm utilization. Here, we report whole-genome resequencing of the 137 rice mini core collection or Korean rice core set (KRICE_CORE) that represents 25,604 rice germplasms deposited in the Korean genebank of the Rural Development Administration (RDA). We implemented the Illumina HiSeq 2000 and 2500 platform to produce short reads and then assembled those with 9.8 depths using Nipponbare as a reference. Comparisons of the sequences with the reference genome yielded more than 15 million (M) single nucleotide polymorphisms (SNPs) and 1.3 M INDELs. Phylogenetic and population analyses using 2,046,529 high-quality SNPs successfully assigned rice accessions to the relevant rice subgroups, suggesting that these SNPs capture evolutionary signatures that have accumulated in rice subpopulations. Furthermore, genome-wide association studies (GWAS) for four exemplary agronomic traits in the KRIC_CORE manifest the utility of KRICE_CORE; that is, identifying previously defined genes or novel genetic factors that potentially regulate important phenotypes. This study provides strong evidence that the size of KRICE_CORE is small but contains high genetic and functional diversity across the genome. Thus, our resequencing results will be useful for future breeding, as well as functional and evolutionary studies, in the post-genomic era.

  3. Geography, topography, and history affect realized-to-potential tree species richness patterns in Europe

    DEFF Research Database (Denmark)

    Svenning, J.-C.; Fitzpatrick, Matthew C.; Normand, Signe

    2010-01-01

    by assembly from regional species pools. Using the European tree flora as our study system, we implemented a novel approach to assess the relative importance of local and regional mechanisms that control local species richness. We first identified species pools that tolerate particular local environments....../P richness ratio estimates, but we found consistent support for a negative effect of regional geographic fragmentation and a positive topographic effect. We also identified fairly broad support for the predicted effect of accessibility. We conclude that local tree assemblages in Europe often fail to realize...

  4. Gypsy endogenous retrovirus maintains potential infectivity in several species of Drosophilids

    Directory of Open Access Journals (Sweden)

    de Frutos Rosa

    2008-10-01

    Full Text Available Abstract Background Sequences homologous to the gypsy retroelement from Drosophila melanogaster are widely distributed among drosophilids. The structure of gypsy includes an open reading frame resembling the retroviral gene env, which is responsible for the infectious properties of retroviruses. Results In this study we report molecular and phylogeny analysis of the complete env gene from ten species of the obscura group of the genus Drosophila and one species from the genus Scaptomyza. Conclusion The results indicate that in most cases env sequences could produce a functional Env protein and therefore maintain the infectious capability of gypsy in these species.

  5. Threatened plant species in the river ports of Central Europe: a potential for nature conservation

    Czech Academy of Sciences Publication Activity Database

    Jehlík, V.; Dostálek, J.; Frantík, Tomáš

    2016-01-01

    Roč. 19, č. 2 (2016), s. 999-1012 ISSN 1083-8155 Institutional support: RVO:67985939 Keywords : Central Europe * plant species richness * waterway Subject RIV: EH - Ecology, Behaviour Impact factor: 1.970, year: 2016

  6. Comparative analysis of yeast-like species potentially useful to environmental biotechnology

    Directory of Open Access Journals (Sweden)

    Anna Grabińska-Łoniewska

    2014-08-01

    Full Text Available Five yeast-like species recommended for enhancing the bioremediation of wastewaters, soils and cxhaust gases contaminated with recalcitrant compounds were analysed with repect to their morphologal characteristics and physiology.

  7. Species distribution models and ecological suitability analysis for potential tick vectors of lyme disease in Mexico.

    Science.gov (United States)

    Illoldi-Rangel, Patricia; Rivaldi, Chissa-Louise; Sissel, Blake; Trout Fryxell, Rebecca; Gordillo-Pérez, Guadalupe; Rodríguez-Moreno, Angel; Williamson, Phillip; Montiel-Parra, Griselda; Sánchez-Cordero, Víctor; Sarkar, Sahotra

    2012-01-01

    Species distribution models were constructed for ten Ixodes species and Amblyomma cajennense for a region including Mexico and Texas. The model was based on a maximum entropy algorithm that used environmental layers to predict the relative probability of presence for each taxon. For Mexico, species geographic ranges were predicted by restricting the models to cells which have a higher probability than the lowest probability of the cells in which a presence record was located. There was spatial nonconcordance between the distributions of Amblyomma cajennense and the Ixodes group with the former restricted to lowlands and mainly the eastern coast of Mexico and the latter to montane regions with lower temperature. The risk of Lyme disease is, therefore, mainly present in the highlands where some Ixodes species are known vectors; if Amblyomma cajennense turns out to be a competent vector, the area of risk also extends to the lowlands and the east coast.

  8. Species Distribution Models and Ecological Suitability Analysis for Potential Tick Vectors of Lyme Disease in Mexico

    Directory of Open Access Journals (Sweden)

    Patricia Illoldi-Rangel

    2012-01-01

    Full Text Available Species distribution models were constructed for ten Ixodes species and Amblyomma cajennense for a region including Mexico and Texas. The model was based on a maximum entropy algorithm that used environmental layers to predict the relative probability of presence for each taxon. For Mexico, species geographic ranges were predicted by restricting the models to cells which have a higher probability than the lowest probability of the cells in which a presence record was located. There was spatial nonconcordance between the distributions of Amblyomma cajennense and the Ixodes group with the former restricted to lowlands and mainly the eastern coast of Mexico and the latter to montane regions with lower temperature. The risk of Lyme disease is, therefore, mainly present in the highlands where some Ixodes species are known vectors; if Amblyomma cajennense turns out to be a competent vector, the area of risk also extends to the lowlands and the east coast.

  9. VOC species and emission inventory from vehicles and their SOA formation potentials estimation in Shanghai, China

    OpenAIRE

    C. Huang; H. L. Wang; L. Li; Q. Wang; Q. Lu; J. A. de Gouw; M. Zhou; S. A. Jing; J. Lu; C. H. Chen

    2015-01-01

    VOC species from vehicle exhaust and gas evaporation were investigated by chassis dynamometer and on-road measurements of 9 gasoline vehicles, 7 diesel vehicles, 5 motorcycles, and 4 gas evaporation samples. The SOA mass yields of gasoline, diesel, motorcycle exhausts, and gas evaporation were calculated based on the mixing ratio of individual VOC species. The SOA mass yields of gasoline and motorcycle exhaust were similar to the results of the published smo...

  10. Evaluating potential conservation conflicts between two listed species: sea otters and black abalone.

    Science.gov (United States)

    Raimondi, Peter; Jurgens, Laura J; Tinker, M Tim

    2015-11-01

    Population consequences of endangered species interacting as predators and prey have been considered theoretically and legally, but rarely investigated in the field. We examined relationships between spatially variable populations of a predator, the California sea otter, Enhydra lutris nereis, and a prey species, the black abalone, Haliotis cracherodii. Both species are federally listed under the Endangered Species Act and co-occur along the coast of California. We compared the local abundance and habitat distribution of black abalone at 12 sites with varying densities of sea otters. All of the populations of abalone we examined were in the geographic area currently unaffected by withering disease, which has decimated populations south of the study area. Surprisingly, our findings indicate that sea otter density is positively associated with increased black abalone density. The presence of sea otters also correlated with a shift in black abalone to habitat conferring greater refuge, which could decrease illegal human harvest. These results highlight the need for a multi-species approach to conservation management of the two species, and demonstrate the importance of using field-collected data rather than simple trophic assumptions to understand relationships between jointly vulnerable predator and prey populations.

  11. The potential of selected macroalgal species for treatment of AMD at different pH ranges in temperate regions

    CSIR Research Space (South Africa)

    Oberholster, Paul J

    2014-09-01

    Full Text Available The metal bioaccumulation potential of selected macroalgae species at different pH ranges was study for usage as part of a possible secondary passive acid mine drainage (AMD) treatment technology in algae ponds. Two separate studies were conducted...

  12. Candidatus Bartonella merieuxii, a potential new zoonotic Bartonella species in canids from Iraq.

    Directory of Open Access Journals (Sweden)

    Bruno B Chomel

    Full Text Available Bartonellae are emerging vector-borne pathogens infecting erythrocytes and endothelial cells of various domestic and wild mammals. Blood samples were collected from domestic and wild canids in Iraq under the United States Army zoonotic disease surveillance program. Serology was performed using an indirect immunofluorescent antibody test for B. henselae, B. clarridgeiae, B. vinsonii subsp. berkhoffii and B. bovis. Overall seroprevalence was 47.4% in dogs (n = 97, 40.4% in jackals (n = 57 and 12.8% in red foxes (n = 39. Bartonella species DNA was amplified from whole blood and representative strains were sequenced. DNA of a new Bartonella species similar to but distinct from B. bovis, was amplified from 37.1% of the dogs and 12.3% of the jackals. B. vinsonii subsp. berkhoffii was also amplified from one jackal and no Bartonella DNA was amplified from foxes. Adjusting for age, the odds of dogs being Bartonella PCR positive were 11.94 times higher than for wild canids (95% CI: 4.55-31.35, suggesting their role as reservoir for this new Bartonella species. This study reports on the prevalence of Bartonella species in domestic and wild canids of Iraq and provides the first detection of Bartonella in jackals. We propose Candidatus Bartonella merieuxii for this new Bartonella species. Most of the Bartonella species identified in sick dogs are also pathogenic for humans. Therefore, seroprevalence in Iraqi dog owners and bacteremia in Iraqi people with unexplained fever or culture negative endocarditis requires further investigation as well as in United States military personnel who were stationed in Iraq. Finally, it will also be essential to test any dog brought back from Iraq to the USA for presence of Bartonella bacteremia to prevent any accidental introduction of a new Bartonella species to the New World.

  13. Identification of a gene expression core signature for Duchenne Muscular Dystrophy (DMD) via integrative analysis reveals novel potential compounds for treatment

    KAUST Repository

    Ichim-Moreno, Norú

    2010-05-01

    Duchenne muscular dystrophy (DMD) is a recessive X-linked form of muscular dystrophy and one of the most prevalent genetic disorders of childhood. DMD is characterized by rapid progression of muscle degeneration, and ultimately death. Currently, glucocorticoids are the only available treatment for DMD, but they have been shown to result in serious side effects. The purpose of this research was to define a core signature of gene expression related to DMD via integrative analysis of mouse and human datasets. This core signature was subsequently used to screen for novel potential compounds that antagonistically affect the expression of signature genes. With this approach we were able to identify compounds that are 1) already used to treat DMD, 2) currently under investigation for treatment, and 3) so far unknown but promising candidates. Our study highlights the potential of meta-analyses through the combination of datasets to unravel previously unrecognized associations and reveal new relationships. © IEEE.

  14. Potential use of ionic species for identifying source land-uses of stormwater runoff.

    Science.gov (United States)

    Lee, Dong Hoon; Kim, Jin Hwi; Mendoza, Joseph A; Lee, Chang-Hee; Kang, Joo-Hyon

    2017-02-01

    Identifying critical land-uses or source areas is important to prioritize resources for cost-effective stormwater management. This study investigated the use of information on ionic composition as a fingerprint to identify the source land-use of stormwater runoff. We used 12 ionic species in stormwater runoff monitored for a total of 20 storm events at five sites with different land-use compositions during the 2012-2014 wet seasons. A stepwise forward discriminant function analysis (DFA) with the jack-knifed cross validation approach was used to select ionic species that better discriminate the land-use of its source. Of the 12 ionic species, 9 species (K + , Mg 2+ , Na + , NH 4 + , Br - , Cl - , F - , NO 2 - , and SO 4 2- ) were selected for better performance of the DFA. The DFA successfully differentiated stormwater samples from urban, rural, and construction sites using concentrations of the ionic species (70%, 95%, and 91% of correct classification, respectively). Over 80% of the new data cases were correctly classified by the trained DFA model. When applied to data cases from a mixed land-use catchment and downstream, the DFA model showed the greater impact of urban areas and rural areas respectively in the earlier and later parts of a storm event.

  15. New species, hyper-diversity and potential importance of Calonectria spp. from Eucalyptus in South China.

    Science.gov (United States)

    Lombard, L; Chen, S F; Mou, X; Zhou, X D; Crous, P W; Wingfield, M J

    2015-03-01

    Plantation forestry is expanding rapidly in China to meet an increasing demand for wood and pulp products globally. Fungal pathogens including species of Calonectria represent a serious threat to the growth and sustainability of this industry. Surveys were conducted in the Guangdong, Guangxi and Hainan Provinces of South China, where Eucalyptus trees in plantations or cuttings in nurseries displayed symptoms of leaf blight. Isolations from symptomatic leaves and soils collected close to infected trees resulted in a large collection of Calonectria isolates. These isolates were identified using the Consolidated Species Concept, employing morphological characters and DNA sequence comparisons for the β-tubulin, calmodulin, histone H3 and translation elongation factor 1-alpha gene regions. Twenty-one Calonectria species were identified of which 18 represented novel taxa. Of these, 12 novel taxa belonged to Sphaero-Naviculate Group and the remaining six to the Prolate Group. Southeast Asia appears to represent a centre of biodiversity for the Sphaero-Naviculate Group and this fact could be one of the important constraints to Eucalyptus forestry in China. The remarkable diversity of Calonectria species in a relatively small area of China and associated with a single tree species is surprising.

  16. Free radical scavenging potential, reducing power, phenolic and biochemical constituents of Porphyra species from India

    Digital Repository Service at National Institute of Oceanography (India)

    Pise, N.M.; Jena, K.B.; Maharana, D.; Gaikwad, D.; Jagtap, T.G.

    . Antioxidant potentials of algae were assessed through phenolic content, 2, 2-diphenyl-1- picrylhydrazyl (DPPH) activity, hydrogen peroxide (H sub(2)O sub(2)), scavenging power and reducing potential. A dose-dependent free radical scavenging action against DPPH...

  17. Shukla-Nambu-Salimullah potential with multi electron species in magnetoplasmas

    Science.gov (United States)

    Khan, Arroj A.; Jamil, M.; Rasheed, A.; Murtaza, G.

    2013-02-01

    The phenomenon of shielding of test charge in the presence of an external magnetic field (Shukla-Nambu-Salimullah potential) is investigated in electron ion plasmas using the approach of two temperature electrons. The modified dispersion relations of ion acoustic waves under different conditions are derived. We get different profiles of potential for different parameters and observe that the potentials fall very slowly than the standard Shukla-Nambu-Salimullah potential given in the reference.

  18. Shukla-Nambu-Salimullah potential with multi electron species in magnetoplasmas

    International Nuclear Information System (INIS)

    Khan, Arroj A.; Murtaza, G.; Jamil, M.; Rasheed, A.

    2013-01-01

    The phenomenon of shielding of test charge in the presence of an external magnetic field (Shukla-Nambu-Salimullah potential) is investigated in electron ion plasmas using the approach of two temperature electrons. The modified dispersion relations of ion acoustic waves under different conditions are derived. We get different profiles of potential for different parameters and observe that the potentials fall very slowly than the standard Shukla-Nambu-Salimullah potential given in the reference.

  19. Climate patterns as predictors of amphibians species richness and indicators of potential stress

    Science.gov (United States)

    Battaglin, W.; Hay, L.; McCabe, G.; Nanjappa, P.; Gallant, Alisa L.

    2005-01-01

    Amphibians occupy a range of habitats throughout the world, but species richness is greatest in regions with moist, warm climates. We modeled the statistical relations of anuran and urodele species richness with mean annual climate for the conterminous United States, and compared the strength of these relations at national and regional levels. Model variables were calculated for county and subcounty mapping units, and included 40-year (1960-1999) annual mean and mean annual climate statistics, mapping unit average elevation, mapping unit land area, and estimates of anuran and urodele species richness. Climate data were derived from more than 7,500 first-order and cooperative meteorological stations and were interpolated to the mapping units using multiple linear regression models. Anuran and urodele species richness were calculated from the United States Geological Survey's Amphibian Research and Monitoring Initiative (ARMI) National Atlas for Amphibian Distributions. The national multivariate linear regression (MLR) model of anuran species richness had an adjusted coefficient of determination (R2) value of 0.64 and the national MLR model for urodele species richness had an R2 value of 0.45. Stratifying the United States by coarse-resolution ecological regions provided models for anUrans that ranged in R2 values from 0.15 to 0.78. Regional models for urodeles had R2 values. ranging from 0.27 to 0.74. In general, regional models for anurans were more strongly influenced by temperature variables, whereas precipitation variables had a larger influence on urodele models.

  20. Modeling the Potential Distribution of Picea chihuahuana Martínez, an Endangered Species at the Sierra Madre Occidental, Mexico

    Directory of Open Access Journals (Sweden)

    Victor Aguilar-Soto

    2015-03-01

    Full Text Available Species distribution models (SDMs help identify areas for the development of populations or communities to prevent extinctions, especially in the face of the global environmental change. This study modeled the potential distribution of the tree Picea chihuahuana Martínez, a species in danger of extinction, using the maximum entropy modeling method (MaxEnt at three scales: local, state and national. We used a total of 38 presence data from the Sierra Madre Occidental. At the local scale, we compared MaxEnt with the reclassification and overlay method integrated in a geographic information system. MaxEnt generated maps with a high predictive capability (AUC > 0.97. The distribution of P. chihuahuana is defined by vegetation type and minimum temperature at national and state scales. At the local scale, both models calculated similar areas for the potential distribution of the species; the variables that better defined the species distribution were vegetation type, aspect and distance to water flows. Populations of P. chihuahuana have always been small, but our results show potential habitat greater than the area of the actual distribution. These results provide an insight into the availability of areas suitable for the species’ regeneration, possibly through assisted colonization.

  1. Improving cluster-based methods for investigating potential for insect pest species establishment: region-specific risk factors

    Directory of Open Access Journals (Sweden)

    Michael J. Watts

    2011-09-01

    Full Text Available Existing cluster-based methods for investigating insect species assemblages or profiles of a region to indicate the risk of new insect pest invasion have a major limitation in that they assign the same species risk factors to each region in a cluster. Clearly regions assigned to the same cluster have different degrees of similarity with respect to their species profile or assemblage. This study addresses this concern by applying weighting factors to the cluster elements used to calculate regional risk factors, thereby producing region-specific risk factors. Using a database of the global distribution of crop insect pest species, we found that we were able to produce highly differentiated region-specific risk factors for insect pests. We did this by weighting cluster elements by their Euclidean distance from the target region. Using this approach meant that risk weightings were derived that were more realistic, as they were specific to the pest profile or species assemblage of each region. This weighting method provides an improved tool for estimating the potential invasion risk posed by exotic species given that they have an opportunity to establish in a target region.

  2. Parasites of the flounder Platichthys flesus (L.) from the German Bight, North Sea, and their potential use in ecosystem monitoring. A. Infection characteristics of potential indicator species

    Science.gov (United States)

    Schmidt, V.; Zander, S.; Körting, W.; Steinhagen, D.

    2003-10-01

    As part of integrated biological-effect monitoring, the parasite fauna of the flounder Platichthys flesus (L.) was investigated at five locations in the German Bight, with a view to using parasite species as bio-indicators. Over a period of 6 years, parasites from 30 different taxa were identified, but only 7 taxa of the parasite community occurred regularly at all locations and in sufficient abundance that they could be considered as potential indicator species. These species were the ciliophoran Trichodina spp., the copepods Acanthochondria cornuta, Lepeophtheirus pectoralis and Lernaeocera branchialis, the helminths Zoogonoides viviparus and Cucullanus heterochrous and metacercaria of an unidentified digenean species. Infection characteristics of these parasites are presented, with a comparison of the results from individual sampling periods and those of the long-term data set. Natural influences on the infection levels, such as temporal variations, habitat conditions and host-related factors, were evaluated. All of these parasite species showed significant differences in their infection levels between the Elbe estuary, as the most polluted site, and the less polluted coastal and marine locations: Helgoland, Outer Eider estuary and Spiekeroog, especially in the long-term data set. Gradual differences between the Elbe, the Outer Eider and Helgoland, which were not detected in individual sampling periods, also became evident in the pooled-data set. These were found in the prevalence of Trichodina spp., A. cornuta, Z. viviparus and C. heterochrous. Although salinity is considered as the most important natural factor, influencing the distribution pattern of the majority of the potential indicator species, infection levels of most of these species differed between locations with similar salinity conditions. Infection levels corresponded to a contamination gradient (Elbe > Inner Eider, Outer Eider > Helgoland) established across the locations. Seasonal variation in

  3. Nutrient composition of important fish species in Bangladesh and potential contribution to recommended nutrient intakes

    DEFF Research Database (Denmark)

    Bogard, Jessica R.; Thilsted, Shakuntala H.; Marks, Geoffrey C.

    2015-01-01

    Fish, in Bangladesh where malnutrition remains a significant development challenge, is an irreplaceable animal-source food in the diet of millions. However, existing data on the nutrient composition of fish do not reflect the large diversity available and have focused on only a few select nutrien...... indigenous species, which should guide policy and programmes to improve food and nutrition security in Bangladesh....

  4. The black Aspergillus species of maize and peanuts and their potential for mycotoxin production

    Science.gov (United States)

    The black spored fungi of the subgenera Circumdata, the section Nigri (=Aspergillus niger group) is reviewed relative to their production of mycotoxins and their effects on plants as pathogens. Molecular methods have revealed more than 18 cryptic species, of which several have been characterized as...

  5. The oral microbiota of domestic cats harbors a wide variety of Staphylococcus species with zoonotic potential.

    Science.gov (United States)

    Rossi, Ciro César; da Silva Dias, Ingrid; Muniz, Igor Mansur; Lilenbaum, Walter; Giambiagi-deMarval, Marcia

    2017-03-01

    This study aimed to characterize the species, antimicrobial resistance and dispersion of CRISPR systems in staphylococci isolated from the oropharynx of domestic cats in Brazil. Staphylococcus strains (n=75) were identified by MALDI-TOF and sequencing of rpoB and tuf genes. Antimicrobial susceptibility was assessed by disk diffusion method and PCR to investigate the presence of antimicrobial-resistance genes usually present in mobile genetic elements (plasmids), in addition to plasmid extraction. CRISPR - genetic arrangements that give the bacteria the ability to resist the entry of exogenous DNA - were investigated by the presence of the essential protein Cas1 gene. A great diversity of Staphylococcus species (n=13) was identified. The presence of understudied species, like S. nepalensis and S. pettenkoferi reveals that more than one identification method may be necessary to achieve conclusive results. At least 56% of the strains contain plamids, being 99% resistant to at least one of the eight tested antimicrobials and 12% multidrug resistant. CRISPR were rare among the studied strains, consistent with their putative role as gene reservoirs. Moreover, herein we describe for the first time their existence in Staphylococcus lentus, to which the system must confer additional adaptive advantage. Prevalence of resistance among staphylococci against antimicrobials used in veterinary and human clinical practice and the zoonotic risk highlight the need of better antimicrobial management practices, as staphylococci may transfer resistance genes among themselves, including to virulent species, like S. aureus. Copyright © 2017 Elsevier B.V. All rights reserved.

  6. Index of Alien Impact: A method for evaluating potential ecological impact of alien plant species

    Science.gov (United States)

    Alien plant species are stressors to ecosystems and indicators of reduced ecosystem integrity. The magnitude of the stress reflects not only the quantity of aliens present, but also the quality of their interactions with native ecosystems. We develop an Index of Alien Impact (IAI...

  7. Fusarium proliferatum isolated from garlic in Spain: identification, toxigenic potential and pathogenicity on related Allium species

    Directory of Open Access Journals (Sweden)

    Daniel PALMERO

    2012-05-01

    Full Text Available Fusarium proliferatum has been reported on garlic in the Northwest USA, Spain and Serbia, causing water-soaked tan-colored lesions on cloves. In this work, Fusarium proliferatum was isolated from 300 symptomatic garlic bulbs. Morphological identification of Fusarium was confirmed using species-specific PCR assays and EF-1α sequencing. Confirmation of pathogenicity was conducted with eighteen isolates. Six randomly selected F. proliferatum isolates from garlic were tested for specific pathogenicity and screened for fusaric acid production. Additionally, pathogenicity of each F. proliferatum isolate was tested on healthy seedlings of onion (Allium cepa, leek (A. porrum, scallions (A. fistulosum, chives (A. schoenoprasum and garlic (A. sativum. A disease severity index (DSI was calculated as the mean severity on three plants of each species with four test replicates. Symptoms on onion and garlic plants were observed three weeks after inoculation. All isolates tested produced symptoms on all varieties inoculated. Inoculation of F. proliferatum isolates from diseased garlic onto other Allium species provided new information on host range and pathogenicity. The results demonstrated differences in susceptibility with respect to host species and cultivar. The F. proliferatum isolates tested all produced fusaric acid (FA; correlations between FA production and isolate pathogenicity are discussed. Additionally, all isolates showed the presence of the FUM1 gene suggesting the ability of Spanish isolates to produce fumonisins.

  8. Susceptibility to Phytophthora ramorum and inoculum production potential of some common eastern forest understory plant species

    Science.gov (United States)

    Paul W. Tooley; Marsha Browning

    2009-01-01

    Twenty-five plant species (21 genera, 14 families), which comprise a portion of the understory in forests of the Eastern United States, were evaluated for susceptibility to infection by Phytophthora ramorum. The degree to which P. ramorum is able to form sporangia and chlamydospores was also assessed on...

  9. Potential aflatoxin and ochratoxin a production by Aspergillus species in poultry feed processing.

    Science.gov (United States)

    Fraga, M E; Curvello, F; Gatti, M J; Cavaglieri, L R; Dalcero, A M; da Rocha Rosa, C A

    2007-04-01

    Poultry feeds are prone to fungal growth and mycotoxin production during processing. The identification of biota with the ability to produce mycotoxins is essential. The aims of this study were (1) to monitor the mycobiota counts at different stages of poultry feed processing; (2) to determine the occurrence of Aspergillus species; (3) to evaluate the natural incidence of aflatoxins and ochratoxin A. The ability of Aspergillus spp. and its teleomorphs isolated here to produce these toxins was also investigated. Samples (144) were collected at random from a factory in Brazil. The occurrence of Aspergillus and Eurotium species was demonstrated on DRBC and DG18 media and the production of aflatoxins and ochratoxin A and their natural incidence were determined by TLC and HPLC methods. A. flavus and E. chevalieri were the most prevalent species isolated. Fungal contamination was not found after the pelleting process, though Aspergillus and Eurotium species were recovered from trough samples. High levels of aflatoxin and ochratoxin A producers were found at all stages of poultry feed processing. Also, high natural contamination with aflatoxins and ochratoxin A was found in the samples. Contact of feed with remainder poultry feed could lead to fungal contamination, so the risk of aflatoxin and/or ochratoxin A contamination of feed must be taken into account.

  10. On the potential of plant species invasion influencing bio-geomorphologic landscape formation in salt marshes

    NARCIS (Netherlands)

    Schwarz, Christian; Ysebaert, Tom; Vandenbruwaene, Wouter; Temmerman, Stijn; Zhang, Li Quan; Herman, Peter M.J.

    2016-01-01

    Species invasions are known to change biotic and abiotic ecosystem characteristics such as community structure, cycling of materials and dynamics of rivers. However, their ability to alter interactions between biotic and abiotic ecosystem components, in particular bio-geomorphic feedbacks and the

  11. On the potential of plant species invasion influencing bio-geomorphologic landscape formation in salt marshes

    NARCIS (Netherlands)

    Schwarz, C.; Ysebaert, T.; Vandenbruwaene, W.; Temmerman, S.; Zhang, L.; Herman, P.

    2016-01-01

    Species invasions are known to change biotic and abiotic ecosystem characteristics such as community structure, cycling of materials and dynamics of rivers. However, their ability to alter interactions between biotic and abiotic ecosystem components, in particular bio-geomorphic feedbacks and the

  12. Evaluating the sources of potential migrant species: implications under climate change

    Science.gov (United States)

    Ines Ibanez; James S. Clark; Michael C. Dietze

    2008-01-01

    As changes in climate become more apparent, ecologists face the challenge of predicting species responses to the new conditions. Most forecasts are based on climate envelopes (CE), correlative approaches that project future distributions on the basis of the current climate often assuming some dispersal lag. One major caveat with this approach is that it ignores the...

  13. Convergent development of a parasitoid wasp on three host species with differing mass and growth potential

    NARCIS (Netherlands)

    Harvey, J.A.; Molina, A.C.; Bezemer, T.M.; Malcicka, M.

    2015-01-01

    Koinobiont parasitoids develop in hosts that continue feeding and growing during the course of parasitism. Here, we compared development of a solitary koinobiont endoparasitoid, Meteorus pulchricornis Westmael (Hymenoptera: Braconidae), in second (L2) and fourth (L4) instars of three host species

  14. A new approach to horizon-scanning: identifying potentially invasive alien species and their introduction pathways

    NARCIS (Netherlands)

    Matthews, Jonathan; Beringen, Ruud; Creemers, Raymond; Hollander, Hans; van Kessel, Nils; van Kleef, Hein; de Koppel, Sander van; Lemaire, Adrienne J. J.; Ode, Baudewijn; Verbrugge, Laura N. H.; Hendriks, A. Jan; Schipper, Aafke M.; van der Velde, Gerard; Leuven, Rob S. E. W.

    Invasive alien species (IAS) are considered an important threat to global biodiversity due to major ecological impacts. In 2014, the European Union (EU) introduced a regulation (EU) No 1143/2014 on the prevention and management of the introduction and spread of IAS. The first risk prioritized list

  15. Using Species Distribution Models to Predict Potential Landscape Restoration Effects on Puma Conservation.

    Science.gov (United States)

    Angelieri, Cintia Camila Silva; Adams-Hosking, Christine; Ferraz, Katia Maria Paschoaletto Micchi de Barros; de Souza, Marcelo Pereira; McAlpine, Clive Alexander

    2016-01-01

    A mosaic of intact native and human-modified vegetation use can provide important habitat for top predators such as the puma (Puma concolor), avoiding negative effects on other species and ecological processes due to cascade trophic interactions. This study investigates the effects of restoration scenarios on the puma's habitat suitability in the most developed Brazilian region (São Paulo State). Species Distribution Models incorporating restoration scenarios were developed using the species' occurrence information to (1) map habitat suitability of pumas in São Paulo State, Southeast, Brazil; (2) test the relative contribution of environmental variables ecologically relevant to the species habitat suitability and (3) project the predicted habitat suitability to future native vegetation restoration scenarios. The Maximum Entropy algorithm was used (Test AUC of 0.84 ± 0.0228) based on seven environmental non-correlated variables and non-autocorrelated presence-only records (n = 342). The percentage of native vegetation (positive influence), elevation (positive influence) and density of roads (negative influence) were considered the most important environmental variables to the model. Model projections to restoration scenarios reflected the high positive relationship between pumas and native vegetation. These projections identified new high suitability areas for pumas (probability of presence >0.5) in highly deforested regions. High suitability areas were increased from 5.3% to 8.5% of the total State extension when the landscapes were restored for ≥ the minimum native vegetation cover rule (20%) established by the Brazilian Forest Code in private lands. This study highlights the importance of a landscape planning approach to improve the conservation outlook for pumas and other species, including not only the establishment and management of protected areas, but also the habitat restoration on private lands. Importantly, the results may inform environmental

  16. Laboratory Investigations of African Pouched Rats (Cricetomys gambianus as a Potential Reservoir Host Species for Monkeypox Virus.

    Directory of Open Access Journals (Sweden)

    Christina L Hutson

    Full Text Available Monkeypox is a zoonotic disease endemic to central and western Africa, where it is a major public health concern. Although Monkeypox virus (MPXV and monkeypox disease in humans have been well characterized, little is known about its natural history, or its maintenance in animal populations of sylvatic reservoir(s. In 2003, several species of rodents imported from Ghana were involved in a monkeypox outbreak in the United States with individuals of three African rodent genera (Cricetomys, Graphiurus, Funisciurus shown to be infected with MPXV. Here, we examine the course of MPXV infection in Cricetomys gambianus (pouched Gambian rats and this rodent species' competence as a host for the virus. We obtained ten Gambian rats from an introduced colony in Grassy Key, Florida and infected eight of these via scarification with a challenge dose of 4X104 plaque forming units (pfu from either of the two primary clades of MPXV: Congo Basin (C-MPXV: n = 4 or West African (W-MPXV: n = 4; an additional 2 animals served as PBS controls. Viral shedding and the effect of infection on activity and physiological aspects of the animals were measured. MPXV challenged animals had significantly higher core body temperatures, reduced activity and increased weight loss than PBS controls. Viable virus was found in samples taken from animals in both experimental groups (C-MPXV and W-MPXV between 3 and 27 days post infection (p.i. (up to 1X108 pfu/ml, with viral DNA found until day 56 p.i. The results from this work show that Cricetomys gambianus (and by inference, probably the closely related species, Cricetomys emini can be infected with MPXV and shed viable virus particles; thus suggesting that these animals may be involved in the maintenance of MPXV in wildlife mammalian populations. More research is needed to elucidate the epidemiology of MPXV and the role of Gambian rats and other species.

  17. Selective fishing and analysis of xanthine oxidase binders from two Fabaceae species by coupling enzyme functionalized core-shell magnetic nanoparticles with HPLC-MS.

    Science.gov (United States)

    Liu, Liangliang; Shi, Shuyun; Zhao, Huading; Yu, Jingang; Jiang, Xinyu; Chen, Xiaoqing

    2014-01-15

    Xanthine oxidase (XOD) immobilized core-shell magnetic silica (Fe3O4@SiO2-XOD) nanoparticles coupled with high performance liquid chromatography-mass spectrometry (HPLC-MS) was developed to fish out and analyze XOD binders from two Fabaceae species, Puerariae lobata flower and Glycyrrhiza uralensis root. The prepared Fe3O4@SiO2-XOD nanoparticles exhibited good specificity for XOD binders, better dispersion in aqueous solution and reusability than those of Fe3O4-XOD nanoparticles. The amount of XOD immobilized onto Fe3O4@SiO2 nanoparticles was 339.9μg/mg and the activity of Fe3O4@SiO2-XOD nanoparticles remained 95% after ten times usage. The optimum conditions of selective fishing were optimized, and finally incubating pH was set at 7, incubating temperature at 25°C and adsorption time at 30min. Twelve XOD binders were successfully identified from ethyl acetate extract of P. lobata flower and G. uralensis root. The developed method provides a rapid, purposeful and effective way to identify active compounds from natural complex mixtures. Copyright © 2013 Elsevier B.V. All rights reserved.

  18. Molecular, biochemical, and morphometric characterization of Fasciola species potentially causing zoonotic disease in Egypt.

    Science.gov (United States)

    El-Rahimy, Hoda H; Mahgoub, Abeer M A; El-Gebaly, Naglaa Saad M; Mousa, Wahid M A; Antably, Abeer S A E

    2012-09-01

    Fascioliasis is an important disease caused by Fasciola hepatica and Fasciola gigantica. The distributions of both species overlap in many areas of Asia and Africa including Egypt. Fifty adult Fasciola worms were collected from livers of cattle and sheep slaughtered in abattoirs, Cairo, Egypt. They were subjected to morphological and metric assessment of external features of fresh adults, morphological and metric assessment of internal anatomy of stained mounted worms, determination of electrophorezed bands of crude adult homogenates using SDS-PAGE, and molecular characterization of species-specific DNA segments using RFLP-PCR. It was found that the correlation between conventional morphology and its morphotype was statistically significant (P value = 0.00). Using SDS-PAGE, 13 bands were detected among both genotypes of Fasciola (35.7, 33.6, 32.4, 29.3, 27.5, 26, 24.4, 23, 21.45, 19, 16.75, 12.5, and 9.1 kDa).The most prevalent bands were that with a molecular weight of 29.3, 26, and 19 kDa. Bands detected were common for both species, but protein bands could not distinguish between F. hepatica and F. gigantica. The result of PCR for the amplification of the selected 28S rDNA fragment with the designed primer set yielded 618 bp long PCR products for F. hepatica and F. gigantica. Different band patterns generated after digestion of the 618 bp segment by the enzyme AvaII obtained with F. hepatica showed segments of the length 529, 62, 27 bp, while with F. gigantica 322, 269, 27 bp bands were obtained. Genotyping revealed no equivocal results. The conventional morphological parameters for species determination of Fasciola spp. endemic in Egypt were evaluated versus protein bands characterization and genotyping. It was concluded that conventional morphological and metric assessments were not useful for differentiation between F. gigantica and F. hepatica due to extensive overlap in the relative ranges. Similar conclusion was reached concerning protein band

  19. Phytoremediation potential of poplar and willow species in small scale constructed wetland for boron removal.

    Science.gov (United States)

    Yıldırım, Kubilay; Kasım, Gözde Çıtır

    2018-03-01

    Boron (B) pollution is an expanding environmental problem throughout the world due to intensive mining practices and extensive usage of B in agricultural chemicals and industrial products in recent years. The purpose of this study was to investigate B removal performance of four poplar and four willow species in small scale Constructed Wetland (CW). Rooted cuttings of tested species were treated with simulated wastewater having five elevated B concentrations (0.5, 5, 10, 20 and 40 ppm). All the tested species could resist up to 20 ppm wastewater B supply and could regrow from their roots in the soil having maximum 15 mg/kg B content. The result of the study indicated that 65% ± 5.3 of B was removed from the wastewater in 5 ppm B treatment while the same efficiency decreased to 45% ± 4.6 at 40 ppm B supply. The average effect of sediment on B removal was found to be approximately 20% for all B treatments while the remaining part of the loaded B was removed from the CW within effluent (35-54%). Therefore, actual effects of plant species on B removal was ranged from 45% to 25% between 5 and 40 ppm B treatments. Mass B removal within plant body (phytextraction) comprised the 13-10% of total loaded B in CW while the remaining part of the loaded B (31-15%) was stabilized into the sediment with the effects of poplar and willow roots. These results presented clear understanding of effective B purification mechanisms in CWs. Boron phytextraction capacity of a plant species was less effective than its phytstabilization efficiency which increase filtering capacity of the sediment and stabilization of more B around the rhizosphere. In terms of their B removal ability, P.nigra and S.anatolica had the highest B removal capacities with phytextraction (20-11%) while S.alba, P.alba and S.babylonica had more phytstabilizaiton performance (40-15%) in CW. Disposal of B loaded plant material create another environmental costs for CW applications. Therefore, B loaded

  20. First report in italy of the exotic mosquito species Aedes (Finlaya koreicus, a potential vector of arboviruses and filariae

    Directory of Open Access Journals (Sweden)

    Capelli Gioia

    2011-09-01

    Full Text Available Abstract Background In the Veneto region (north-eastern Italy an entomological surveillance system has been implemented since the introduction of the Asian tiger mosquito (Aedes albopictus in 1991. During the routine monitoring activity in a tiger mosquito-free area, an unexpected mosquito was noticed, which clearly did not belong to the recorded Italian fauna. Findings At the end of May 2011, twelve larvae and pupae were collected in a small village in Belluno province (Veneto region from a single manhole. Ten adults reared in the laboratory were morphologically and genetically identified as Aedes (Finlaya koreicus (Edwards, 1917, a species native to Southeast Asia. The subsequent investigations carried out in the following months in the same village provided evidence that this species had become established locally. Entomological and epidemiological investigations are currently ongoing in the surrounding area, to verify the eventual extension of the species outside the village and to trace back the route of entry into Italy. Conclusions This is the first report in Italy of the introduction of the exotic mosquito Ae. koreicus. This species has been shown experimentally to be competent in the transmission of the Japanese encephalitis virus and of the dog heartworm Dirofilaria immitis and is considered a potential vector of other arboviruses. Thus, the establishment of this species may increase the current risk or pose new potential threats, for human and animal health. This finding considerably complicates the entomological monitoring of the Asian tiger mosquito Ae. albopictus in Italy and stresses the importance of implementing the entomological surveillance for the early detection of and the rapid response against invasive mosquito species.

  1. Comparison of regeneration potentials in tissue cultures of primitive and cultivated tomato species (Lycopersicon sp.

    Directory of Open Access Journals (Sweden)

    M. Lech

    2014-01-01

    Full Text Available Regeneration capacities of two tomato cultivars: Potentat and Rutgers, and of three accessions of wild tomato species: Lycopersicon peruvianum PI 128650, L. peruvianum var. dentatum PI 128655 and L. glandulosum were studied using an universal medium suitable for regeneration of those plants from leaf pieces in tissue culture. Fragments of leaf blades were taken from plants raised in greenhouse conditions and placed on a modified MS medium containing 0.3 mg/l IAA and 3.0 mg/l BAP solidified with 1% agar. The explants were transferred every 4-5 weeks on fresh medium of the same composition. It was shown that all the three primitive tomato species revealed much higher multiplication coefficients than the two cultivars. Appropriate values were: 11 - for L. glandulosum, 8 - for L. peruvianum, 7 - for L. peruvianum var. dentatum, 4 - for L. esculentum cv. Potentat and 2 - cv. Rutgers. Completely regenerated plants were obtained from all the tested species, but organogenesis occurred almost two weeks earlier in wild tomatoes than in the culitivated varieties of L. esculentum.

  2. Lipid content and composition of oocytes from five coral species: potential implications for future cryopreservation efforts.

    Directory of Open Access Journals (Sweden)

    Chiahsin Lin

    Full Text Available Given the previously documented importance of lipid concentration and composition in the successful cryopreservation of gorgonian corals, these parameters were assessed in oocytes of five species of scleractinian coral; Platygyra daedalea, Echinopora gemmacea, Echinophyllia aspera, Oxypora lacera and Astreopora expansa. Wax esters, phosphatidylethanolamine, phosphatidylcholine, and fatty acids were all measured at detectable levels, and the latter were produced at significantly elevated quantities in E. gemmacea, E. aspera, and O. lacera. On the other hand, phosphatidylethanolamine, phosphatidylcholine, and wax ester were found at significantly higher concentrations in A. expansa oocytes. Triacylglycerol was not present in any species. Interestingly, the total lipid content of oocytes from all five scleractinians was significantly lower than that of oocytes of two gorgonian species, Junceella juncea and Junceella fragilis. As higher total lipid concentrations may be correlated with greater degrees of cellular membrane fluidity at lower temperatures, it stands to reason that gorgonian coral oocytes may be more likely to survive the cryopreservation process than oocytes of scleractinian corals.

  3. Diazotrophic potential among bacterial communities associated with wild and cultivated Agave species.

    Science.gov (United States)

    Desgarennes, Damaris; Garrido, Etzel; Torres-Gomez, Miryam J; Peña-Cabriales, Juan J; Partida-Martinez, Laila P

    2014-12-01

    Agaves are major biotic resources in arid and semi-arid ecosystems. Despite their ecological, economical and cultural relevance, many aspects of the microbial communities associated with agaves are still unknown. Here, we investigated the bacterial communities associated with two Agave species by 16S rRNA- Denaturing gradient gel electrophoresis fingerprinting and sequencing. We also evaluated the effects of biotic and abiotic factors in the structure of the bacterial communities. In parallel, we isolated and characterized diazotrophic bacteria associated with agaves, as Agave soils are characterized by their low nitrogen content. Our results demonstrate that in Agave, the structure of prokaryotic assemblages was mostly influenced by the community group, where the soil, episphere, and endosphere were clearly distinct. Proteobacteria (γ and α), Actinobacteria, and Acidobacteria were the dominant phyla. Bacterial communities in the episphere of agaves were mainly influenced by the host species, whereas in the endosphere were affected by the season. Fifteen bacterial taxa were common and abundant in the endosphere of both Agave species during the dry season. Notably, some of the confirmed diazotrophic strains belonged to this group, suggesting a possible beneficial role in planta. © 2014 Federation of European Microbiological Societies. Published by John Wiley & Sons Ltd. All rights reserved.

  4. Comparison of four species of snails as potential decoys to intercept schistosome miracidia.

    Science.gov (United States)

    Laracuente, A; Brown, R A; Jobin, W

    1979-01-01

    Preliminary studies have shown that various species of aquatic snails may be used as decoys or "sponges" to intercept schistosome miracidia, thereby preventing the miracidia from reaching the snails which normally serve as their intermediate host. In this study, four species of snails were evaluated as candidate decoys for field trials: Marisa cornuarietis, Pomacea australis, Helisoma caribaeum, and Tarebia granifera. In the laboratory all four species caused considerable reductions in the proportion of Biomphalaria glabrata infected by miracidia of Schistosoma mansoni. The most effective decoys were M. cornuarietis and H. caribaeum, both of which caused experimental infection levels of 90% to decrease to 25% when five decoy snails were present for each target snail. When ten decoy snails were present for each target snail, the proportion infected decreased to 1%. M. cornuarietis was chosen as the candidate for field trials because it was found more frequently in Puerto Rico than was H. caribaeum. Initial field trials in two ponds showed that M. cornuarietis blocked infections at a ratio of 6 decoys to 1 target snail, confirming the laboratory results. Further studies in flowing water are needed before the technique can be generally evaluated in an endemic area.

  5. Evaluation of the use potential of nine species of genus Eucalyptus for production of veneers and plywood panels

    Directory of Open Access Journals (Sweden)

    Setsuo Iwakiri

    2013-06-01

    Full Text Available The objective of thisstudywas to evaluate the use potential of nine species of Eucalyptus for production of veneer sheets and multilaminated plywood panels. Veneers were cut using a pilot laminating lathe to a nominal thickness of 2.0 mm. Analysis included finding values of overall yield and yield according to three quality classes for the nine relevant species. Plywood panels were manufactured in a laboratory, consisting of five 2.0 mm veneer sheets which were bonded together with phenol-formaldehyde resin at a weight of 360 g/m2 (double line. The panels were compressed using a specific pressure of 10 kgf/cm2, a temperature of 140ºC and a pressing time of 10 minutes. Results indicated that, with the exception of E. phaeotricha and E. pellita, all other Eucalyptus species had above 50% average veneer yield after lamination. Results of glue line shear testing and static bending parallel and perpendicular demonstrated that species Eucalyptus grandis, Eucalyptus saligna, Eucalyptus dunnii, Eucalyptus globulus, Eucalyptus viminalis, Eucalyptus robusta and Eucalyptus pellita have great potential within the parameters of this study for use in the production of veneer sheets and plywood panels intended for outdoor use.

  6. A core invasiveness gene signature reflects epithelial-to-mesenchymal transition but not metastatic potential in breast cancer cell lines and tissue samples.

    Directory of Open Access Journals (Sweden)

    Melike Marsan

    Full Text Available INTRODUCTION: Metastases remain the primary cause of cancer-related death. The acquisition of invasive tumour cell behaviour is thought to be a cornerstone of the metastatic cascade. Therefore, gene signatures related to invasiveness could aid in stratifying patients according to their prognostic profile. In the present study we aimed at identifying an invasiveness gene signature and investigated its biological relevance in breast cancer. METHODS & RESULTS: We collected a set of published gene signatures related to cell motility and invasion. Using this collection, we identified 16 genes that were represented at a higher frequency than observed by coincidence, hereafter named the core invasiveness gene signature. Principal component analysis showed that these overrepresented genes were able to segregate invasive and non-invasive breast cancer cell lines, outperforming sets of 16 randomly selected genes (all P<0.001. When applied onto additional data sets, the expression of the core invasiveness gene signature was significantly elevated in cell lines forced to undergo epithelial-mesenchymal transition. The link between core invasiveness gene expression and epithelial-mesenchymal transition was also confirmed in a dataset consisting of 2420 human breast cancer samples. Univariate and multivariate Cox regression analysis demonstrated that CIG expression is not associated with a shorter distant metastasis free survival interval (HR = 0.956, 95%C.I. = 0.896-1.019, P = 0.186. DISCUSSION: These data demonstrate that we have identified a set of core invasiveness genes, the expression of which is associated with epithelial-mesenchymal transition in breast cancer cell lines and in human tissue samples. Despite the connection between epithelial-mesenchymal transition and invasive tumour cell behaviour, we were unable to demonstrate a link between the core invasiveness gene signature and enhanced metastatic potential.

  7. Dominant forest tree species are potentially vulnerable to climate change over large portions of their range even at high latitudes

    Directory of Open Access Journals (Sweden)

    Catherine Périé

    2016-07-01

    Full Text Available Projecting suitable conditions for a species as a function of future climate provides a reasonable, although admittedly imperfect, spatially explicit estimate of species vulnerability associated with climate change. Projections emphasizing range shifts at continental scale, however, can mask contrasting patterns at local or regional scale where management and policy decisions are made. Moreover, models usually show potential for areas to become climatically unsuitable, remain suitable, or become suitable for a particular species with climate change, but each of these outcomes raises markedly different ecological and management issues. Managing forest decline at sites where climatic stress is projected to increase is likely to be the most immediate challenge resulting from climate change. Here we assess habitat suitability with climate change for five dominant tree species of eastern North American forests, focusing on areas of greatest vulnerability (loss of suitability in the baseline range in Quebec (Canada rather than opportunities (increase in suitability. Results show that these species are at risk of maladaptation over a remarkably large proportion of their baseline range. Depending on species, 5–21% of currently climatically suitable habitats are projected to be at risk of becoming unsuitable. This suggests that species that have traditionally defined whole regional vegetation assemblages could become less adapted to these regions, with significant impact on ecosystems and forest economy. In spite of their well-recognised limitations and the uncertainty that remains, regionally-explicit risk assessment approaches remain one of the best options to convey that message and the need for climate policies and forest management adaptation strategies.

  8. Dominant forest tree species are potentially vulnerable to climate change over large portions of their range even at high latitudes.

    Science.gov (United States)

    Périé, Catherine; de Blois, Sylvie

    2016-01-01

    Projecting suitable conditions for a species as a function of future climate provides a reasonable, although admittedly imperfect, spatially explicit estimate of species vulnerability associated with climate change. Projections emphasizing range shifts at continental scale, however, can mask contrasting patterns at local or regional scale where management and policy decisions are made. Moreover, models usually show potential for areas to become climatically unsuitable, remain suitable, or become suitable for a particular species with climate change, but each of these outcomes raises markedly different ecological and management issues. Managing forest decline at sites where climatic stress is projected to increase is likely to be the most immediate challenge resulting from climate change. Here we assess habitat suitability with climate change for five dominant tree species of eastern North American forests, focusing on areas of greatest vulnerability (loss of suitability in the baseline range) in Quebec (Canada) rather than opportunities (increase in suitability). Results show that these species are at risk of maladaptation over a remarkably large proportion of their baseline range. Depending on species, 5-21% of currently climatically suitable habitats are projected to be at risk of becoming unsuitable. This suggests that species that have traditionally defined whole regional vegetation assemblages could become less adapted to these regions, with significant impact on ecosystems and forest economy. In spite of their well-recognised limitations and the uncertainty that remains, regionally-explicit risk assessment approaches remain one of the best options to convey that message and the need for climate policies and forest management adaptation strategies.

  9. Preliminary study of Malaysian fruit bats species diversity in Lenggong Livestock Breeding Center, Perak: Potential risk of spill over infection

    Directory of Open Access Journals (Sweden)

    Muhammed Mikail

    2017-11-01

    Full Text Available Aim: Farms that are neighboring wildlife sanctuaries are at risk of spillover infection from wildlife, and the objective of this research is to examine the species diversity of Malaysian fruit bats in livestock farm in determining the possible risk of spill over infection to livestock. Materials and Methods: Fifty individual fruit bats were captured using six mists net, from May to July 2017. The nets were set at dusk (1830 h as bats emerge for foraging and monitored at every 30-min intervals throughout the night until dawn when they returned to the roost. The nets were closed for the day until next night, and captured bats were identified to species levels. Results: All the captured bats were mega chiropterans, and Cynopterus brachyotis was the highest captured species, representing 40% of the total capture. Shannon-Weiner index is 2.80, and Simpson index is 0.2. Our result suggests that there is a degree of species dominance with low diversity in Lenggong Livestock Breeding Center. Conclusion: We concluded that fruit bats are indeed, encroaching livestock areas and the species identified could be a potential source of infection to susceptible livestock. Hence, an active surveillance should be embarked on farms that border wildlife sanctuaries.

  10. Performance of optimized McRAPD in identification of 9 yeast species frequently isolated from patient samples: potential for automation.

    Science.gov (United States)

    Trtkova, Jitka; Pavlicek, Petr; Ruskova, Lenka; Hamal, Petr; Koukalova, Dagmar; Raclavsky, Vladislav

    2009-11-10

    Rapid, easy, economical and accurate species identification of yeasts isolated from clinical samples remains an important challenge for routine microbiological laboratories, because susceptibility to antifungal agents, probability to develop resistance and ability to cause disease vary in different species. To overcome the drawbacks of the currently available techniques we have recently proposed an innovative approach to yeast species identification based on RAPD genotyping and termed McRAPD (Melting curve of RAPD). Here we have evaluated its performance on a broader spectrum of clinically relevant yeast species and also examined the potential of automated and semi-automated interpretation of McRAPD data for yeast species identification. A simple fully automated algorithm based on normalized melting data identified 80% of the isolates correctly. When this algorithm was supplemented by semi-automated matching of decisive peaks in first derivative plots, 87% of the isolates were identified correctly. However, a computer-aided visual matching of derivative plots showed the best performance with average 98.3% of the accurately identified isolates, almost matching the 99.4% performance of traditional RAPD fingerprinting. Since McRAPD technique omits gel electrophoresis and can be performed in a rapid, economical and convenient way, we believe that it can find its place in routine identification of medically important yeasts in advanced diagnostic laboratories that are able to adopt this technique. It can also serve as a broad-range high-throughput technique for epidemiological surveillance.

  11. Evaluating potential impacts of species conversion on transpiration in the Piedmont of North Carolina

    Science.gov (United States)

    Boggs, J.; Treasure, E.; Simpson, G.; Domec, J.; Sun, G.; McNulty, S.

    2010-12-01

    Land management practices that include species conversion or vegetation manipulation can have consequences to surface water availability, groundwater recharge, streamflow generation, and water quality through altering the transpiration processes in forested watersheds. Our objective in this study is to compare stand water use or transpiration in a piedmont mixed hardwood stand (i.e., present stand) to five hypothetical single species stands (i.e., management scenarios), [Quercus spp. (oak), Acer Rubrum (red maple), Liquidambar styraciflua (sweetgum), Liriodendron tulipifera (tulip poplar), and Pinus Taeda (loblolly pine]. Since October 2007, six watersheds with a flume or v-notch weir installed at the watershed outlet have been monitored for baseline streamflow rates (mm d-1). In the summer of 2010, five trees from each of the above species were instrumented with sap flow sensors in the riparian upland of one watershed to develop linkages between stand stream runoff and transpiration. The sap flow or thermal heat dissipation method was used to calculate tree sap flux density for the mixed hardwood stand. Tree sapwood area and stand tree density were then used to compute stand transpiration rates, mm d-1, from June - August 2010. The parameters of the hypothetical single species stands were based on values determined from mixed hardwood stand conditions (e.g., the same stand sapwood area and stand tree density were applied to each option). The diameter at beast height of the monitored trees ranged from 10 cm to 38 cm with a water use range of 1.8 kg d-1 to 104 kg d-1. From our preliminary data, we found daily transpiration from the mixed hardwood stand (2.8 mm d-1 ± 0.06) was significantly (p < 0.05) lower than daily transpiration from the red maple (3.7 mm d-1 ± 0.14) and tulip poplar (3.5 mm d-1 ± 0.12) single species stand management option and significantly (p < 0.05) higher than the loblolly pine (2.3 mm d-1 ± 0.08), sweetgum (2.1 mm d-1 ± 0.08) and oak

  12. Applying species-tree analyses to deep phylogenetic histories: challenges and potential suggested from a survey of empirical phylogenetic studies.

    Science.gov (United States)

    Lanier, Hayley C; Knowles, L Lacey

    2015-02-01

    Coalescent-based methods for species-tree estimation are becoming a dominant approach for reconstructing species histories from multi-locus data, with most of the studies examining these methodologies focused on recently diverged species. However, deeper phylogenies, such as the datasets that comprise many Tree of Life (ToL) studies, also exhibit gene-tree discordance. This discord may also arise from the stochastic sorting of gene lineages during the speciation process (i.e., reflecting the random coalescence of gene lineages in ancestral populations). It remains unknown whether guidelines regarding methodologies and numbers of loci established by simulation studies at shallow tree depths translate into accurate species relationships for deeper phylogenetic histories. We address this knowledge gap and specifically identify the challenges and limitations of species-tree methods that account for coalescent variance for deeper phylogenies. Using simulated data with characteristics informed by empirical studies, we evaluate both the accuracy of estimated species trees and the characteristics associated with recalcitrant nodes, with a specific focus on whether coalescent variance is generally responsible for the lack of resolution. By determining the proportion of coalescent genealogies that support a particular node, we demonstrate that (1) species-tree methods account for coalescent variance at deep nodes and (2) mutational variance - not gene-tree discord arising from the coalescent - posed the primary challenge for accurate reconstruction across the tree. For example, many nodes were accurately resolved despite predicted discord from the random coalescence of gene lineages and nodes with poor support were distributed across a range of depths (i.e., they were not restricted to a particular recent divergences). Given their broad taxonomic scope and large sampling of taxa, deep level phylogenies pose several potential methodological complications including

  13. Shark Attacks in Dakar and the Cap Vert Peninsula, Senegal: Low Incidence despite High Occurrence of Potentially Dangerous Species

    OpenAIRE

    Trape, Sébastien

    2008-01-01

    BACKGROUND: The International Shark Attack File mentions only four unprovoked shark attacks on the coast of West Africa during the period 1828-2004, an area where high concentrations of sharks and 17 species potentially dangerous to man have been observed. To investigate if the frequency of shark attacks could be really low and not just under-reported and whether there are potentially sharks that might attack in the area, a study was carried out in Dakar and the Cap Vert peninsula, Senegal. M...

  14. Current Advances in the Antimicrobial Potential of Species of Genus Ganoderma (Higher Basidiomycetes) against Human Pathogenic Microorganisms (Review).

    Science.gov (United States)

    Rai, Mahendra K; Gaikwad, Swapnil; Nagaonkar, Dipali; dos Santos, Carolina Alves

    2015-01-01

    Ganoderma spp. are very important therapeutic mushrooms and have been used traditionally for 4000 years in the treatment of various human disorders. Different species of Ganoderma possess bioactive compounds, which have already demonstrated antiviral, antibacterial, and antifungal activities. Various bioactive compounds such as triterpenoids, colossolactones, and polysaccharides, which are responsible for the antimicrobial potential of the genus, are discussed here in detail. Some Ganoderma spp. have been reported to be potential agents for the synthesis of metal nanoparticles. These nanoparticles have demonstrated antimicrobial activity and also are reviewed herein. The main aim of this review is to discuss the possible use of Ganoderma extracts and their active principles in antimicrobial therapy.

  15. Maxent modeling for predicting the potential geographical distribution of two peony species under climate change.

    Science.gov (United States)

    Zhang, Keliang; Yao, Linjun; Meng, Jiasong; Tao, Jun

    2018-09-01

    Paeonia (Paeoniaceae), an economically important plant genus, includes many popular ornamentals and medicinal plant species used in traditional Chinese medicine. Little is known about the properties of the habitat distribution and the important eco-environmental factors shaping the suitability. Based on high-resolution environmental data for current and future climate scenarios, we modeled the present and future suitable habitat for P. delavayi and P. rockii by Maxent, evaluated the importance of environmental factors in shaping their distribution, and identified distribution shifts under climate change scenarios. The results showed that the moderate and high suitable areas for P. delavayi and P. rockii encompassed ca. 4.46×10 5 km 2 and 1.89×10 5 km 2 , respectively. Temperature seasonality and isothermality were identified as the most critical factors shaping P. delavayi distribution, and UVB-4 and annual precipitation were identified as the most critical for shaping P. rockii distribution. Under the scenario with a low concentration of greenhouse gas emissions (RCP2.6), the range of both species increased as global warming intensified; however, under the scenario with higher concentrations of emissions (RCP8.5), the suitable habitat range of P. delavayi decreased while P. rockii increased. Overall, our prediction showed that a shift in distribution of suitable habitat to higher elevations would gradually become more significant. The information gained from this study should provide a useful reference for implementing long-term conservation and management strategies for these species. Copyright © 2018. Published by Elsevier B.V.

  16. Viability and Risk Assessment in Species Restoration: Planning Reintroductions for the Wild Boar, a Potential Disease Reservoir

    Directory of Open Access Journals (Sweden)

    Néstor Fernández

    2006-06-01

    Full Text Available The reintroduction of large mammals is often considered a priority conservation action in highly industrialized countries in which many of these species have been depleted. However, species reintroduction after decades of absence may involve important risks for human activities and ecological communities, such as favoring the spread of diseases. An example of a potentially troublesome reintroduction is the wild boar, which may act as a reservoir of diseases, e.g., classical swine fever, and cause high economic losses, and has become a species of concern in several European countries for both ecological and recreational reasons. Failure to prevent the disease consequences of species restoration can negate its conservation benefits. Here we evaluated the probability of both successfully reintroducing wild boar into Denmark and limiting their contact with domestic pig farms to which they might spread disease. For this purpose, we developed a spatially explicit, individual-based population model that incorporates information on boar habitat and demography information from Central European populations. We then compared model predictions with the spatial distribution of farms to achieve a spatial assessment of the contact risk. The most restrictive model scenario predicted that nearly 6% of Denmark provides habitat conditions that would allow wild boar to reproduce. The best habitats for reintroduction were aggregated in seven different areas throughout the country in which the extinction probability was < 5%. However, the expected population expansion was very limited in most of these areas. Both the number of suitable areas and the potential for population expansion greatly increased when we relaxed our habitat assumptions about boar forest requirements; this provided a more conservative scenario for a cautious risk analysis. We additionally found that part of the risk of contact with piggeries was associated with the magnitude of the expansion

  17. Comparison of nutrient removal capacity and biomass settleability of four high-potential microalgal species.

    Science.gov (United States)

    Su, Yanyan; Mennerich, Artur; Urban, Brigitte

    2012-11-01

    Four common used microalgae species were compared in terms of settleability, nutrient removal capacity and biomass productivity. After 1 month training, except cyanobacteria Phormidium sp., three green microalgae species, Chlamydomonas reinhardtii, Chlorella vulgaris and Scenedesmus rubescens, showed good settleability. The N and P removal efficiency was all above 99% within 7, 4, 6 and 6 days for N and 4, 2, 3 and 4 days for P, resulting in the N removal rates of 3.66±0.17, 6.39±0.20, 4.39±0.06 and 4.31±0.18 mg N/l/d and P removal rates of 0.56±0.07, 0.89±0.05, 0.76±0.09 and 0.60±0.05 mg P/l/d for Phormidium sp., C. reinhardtii, C. vulgaris and S. rubescens, respectively. Phormidium sp. had the lowest algal biomass productivity (2.71±0.7 g/m(2)/d) and the other three green microalgae showed higher algal biomass productivity (around 6 g/m(2)/d). Assimilation into biomass was the main removal mechanism for N and P. Copyright © 2012 Elsevier Ltd. All rights reserved.

  18. Hepatoprotective potential of three sargassum species from Karachi coast against carbon tetrachloride and acetaminophen intoxication

    Directory of Open Access Journals (Sweden)

    Khan Hira

    2016-01-01

    Full Text Available Objective: To assess the hepatoprotective effect of ethanol extracts of Sargassum variegatum (S. variegatum, Sargassum tenerrimum (S. tenerrimum and Sargassum binderi occurring at Karachi coast against carbon tetrachloride (CCl4 and acetaminophen intoxication in rats. Methods: Sargassum species were collected at low tide from Buleji beach at Karachi coast. Effect of ethanol extracts of Sargassum spp., on lipid parameter, serum glucose and kidney function was examined. Liver damage in rats was induced by CCl4 or acetaminophen. Rats were administered with ethanol extracts of S. tenerrimum, S. variegatum and Sargassum binderi at 200 mg/kg body weight daily for 14 days separately. Hepatotoxicity was determined in terms of cardiac and liver enzymes and other biochemical parameters. Results: S. variegatum showed highest activity by reducing the elevated level of hepatic enzymes, bilirubin, serum glucose, triglyceride with restoration of cholesterol. Urea and creatinine concentrations were also significantly (P < 0.05 reduced as compared to acetaminophen intoxicated rats. S. tenerrimum and S. variegatum showed moderate activity against CCl4 hepatic toxicity. Conclusions: The protective role of S. variegatum against acetaminophen liver damage and its positive impact on disturbed lipid, glucose metabolism, kidney dysfunction and S. tenerrimum against CCl4 liver toxicity suggest that Sargassum species offer a non-chemical means for the treatment of toxicity mediated liver damage.

  19. Nitrogen species in drinking water indicate potential exposure pathway for Balkan Endemic Nephropathy

    International Nuclear Information System (INIS)

    Niagolova, Nedialka; McElmurry, Shawn P.; Voice, Thomas C.; Long, David T.; Petropoulos, Evangelos A.; Havezov, Ivan; Chou, Karen; Ganev, Varban

    2005-01-01

    This study explored two hypotheses relating elevated concentrations of nitrogen species in drinking water and the disease Balkan Endemic Nephropathy (BEN). Drinking water samples were collected from a variety of water supplies in both endemic and non-endemic villages in the Vratza and Montana districts of Bulgaria. The majority of well water samples exceeded US drinking water standards for nitrate + nitrite. No statistically significant difference was observed for any of the nitrogen species between villages classified as endemic and non-endemic. Other constituents (sodium, potassium and chloride) known to be indicators of anthropogenic pollution were also found at elevated concentrations and all followed the order wells > springs > taps. This ordering coincides with the proximity of human influences to the water sources. Our results clearly establish an exposure pathway between anthropogenic activity and drinking water supplies, suggesting that the causative agent for BEN could result from surface contamination. - Water in villages affected and unaffected by Balkan Endemic Nephropathy had no significant differences in nitrogen compounds

  20. HELIOTROPIUM GREUTERI: A POTENTIAL ORNAMENTAL SPECIES WITH ATTRACTIVE, LENGTHY DURATION OF FLOWERING AND DROUGHT TOLERANCE

    Directory of Open Access Journals (Sweden)

    Osman Gulsen

    2017-12-01

    Full Text Available Turkey is in the middle of major continents, Africa, Asia and Europe that creates considerable diversity. Many plant species are endemic to Turkey and the members of Boraginaceae family is one of the most important among them. For years, we are evaluating/observing Heliotropium greuteri H. Riedl, named as ‘yoghurt otu’ and affiliated to the Boraginaceae family. Heliotropium greuteri, seen as extensively in Kayseri region, has fragrant flowers and quite long flowering period. It has good ornamental characteristics because of long flowering period up to four months, showy plants with white and green colors, fragrant flowers, and considerable drought tolerance. They also attract honeybees, especially during poor vegetation as at the end of summer and in the first half of fall season. They can be used as cover plant in parks, home gardens and road sides. It can be successfully used in open areas as well as under trees (semi-shaded. Especially they can produce healthy plants at the borders where they are often exposed to drought stress. Overall, this species has desirable ornamental characteristics and can be alternative for landscaping.

  1. Sexing a sex-role-reversed species based on plumage: potential challenges in the red phalarope

    Directory of Open Access Journals (Sweden)

    Marie-Andrée Giroux

    2016-05-01

    Full Text Available Sex-role reversal, in which males care for offspring, can occur when mate competition is stronger between females than males. Secondary sex traits and mate attracting displays in sex-role-reversed species are usually more pronounced in females than in males. The red phalarope (Phalaropus fulicarius is a textbook example of a sex-role-reversed species. It is generally agreed that males are responsible for all incubation and parental care duties, whereas females typically desert males after having completed a clutch and may pair with new males to lay additional clutches. The breeding plumage of female red phalaropes is usually more brightly colored than male plumage, a reversed sexual dichromatism usually associated with sex-role reversal. Here, we confirm with PCR-based sexing that male red phalaropes can exhibit both the red body plumage typical of a female and the incubation behavior typical of a male. Our result, combined with previous observations of brightly colored red phalaropes incubating nests at the same arctic location (Igloolik Island, Nunavut, Canada, suggests that plumage dichromatism alone may not be sufficient to distinguish males from females in this breeding population of red phalaropes. This stresses the need for more systematic genetic sexing combined with standardized description of intersexual differences in red phalarope plumages. Determining whether such female-like plumage on males is a result of phenotypic plasticity or genetic variation could contribute to further understanding sex-role reversal strategies in the short Arctic summer.

  2. Rapid evolution meets invasive species control: The potential for pesticide resistance in sea lamprey

    Science.gov (United States)

    Dunlop, Erin S.; McLaughlin, Robert L.; Adams, Jean V.; Jones, Michael L.; Birceanu, Oana; Christie, Mark R.; Criger, Lori A.; Hinderer, Julia L.M.; Hollingworth, Robert M.; Johnson, Nicholas; Lantz, Stephen R.; Li, Weiming; Miller, James R.; Morrison, Bruce J.; Mota-Sanchez, David; Muir, Andrew M.; Sepulveda, Maria S.; Steeves, Todd B.; Walter, Lisa; Westman, Erin; Wirgin, Isaac; Wilkie, Michael P.

    2018-01-01

    Rapid evolution of pest, pathogen and wildlife populations can have undesirable effects; for example, when insects evolve resistance to pesticides or fishes evolve smaller body size in response to harvest. A destructive invasive species in the Laurentian Great Lakes, the sea lamprey (Petromyzon marinus) has been controlled with the pesticide 3-trifluoromethyl-4-nitrophenol (TFM) since the 1950s. We evaluated the likelihood of sea lamprey evolving resistance to TFM by (1) reviewing sea lamprey life history and control; (2) identifying physiological and behavioural resistance strategies; (3) estimating the strength of selection from TFM; (4) assessing the timeline for evolution; and (5) analyzing historical toxicity data for evidence of resistance. The number of sea lamprey generations exposed to TFM was within the range observed for fish populations where rapid evolution has occurred. Mortality from TFM was estimated as 82-90%, suggesting significant selective pressure. However, 57 years of toxicity data revealed no increase in lethal concentrations of TFM. Vigilance and the development of alternative controls are required to prevent this aquatic invasive species from evolving strategies to evade control.

  3. Potential phytotoxic and shading effects of invasive Fallopia (Polygonaceae taxa on the germination of native dominant species

    Directory of Open Access Journals (Sweden)

    Lenka Moravcová

    2011-08-01

    riparian-like habitats where it often encounters U. dioica populations, while F. ×bohemica tends to occur more often in ruderal sites with a high representation of C. epigejos; this might imply that each of the knotweed species exhibits a stronger effect on native species that are dominant in habitats they typically invade. The weakest phytotoxic effect of F. japonica corresponds to the results of previous studies that found this species to be generally a weaker competitor than its two congeners. Although the results of our experiments cannot be taken as a direct evidence for allelopathic effects acting in the field, the demonstrated potential phytotoxic effect of invasive Fallopia species on the germination of native species suggests that allelopathy may play a role in the strong impact of knotweed invasion on species diversity of invaded communities observed in the field.

  4. Potential transformation of trace species including aircraft exhaust in a cloud environment. The `Chedrom model`

    Energy Technology Data Exchange (ETDEWEB)

    Ozolin, Y.E.; Karol, I.L. [Main Geophysical Observatory, St. Petersburg (Russian Federation); Ramaroson, R. [Office National d`Etudes et de Recherches Aerospatiales (ONERA), 92 - Chatillon (France)

    1997-12-31

    Box model for coupled gaseous and aqueous phases is used for sensitivity study of potential transformation of trace gases in a cloud environment. The rate of this transformation decreases with decreasing of pH in droplets, with decreasing of photodissociation rates inside the cloud and with increasing of the droplet size. Model calculations show the potential formation of H{sub 2}O{sub 2} in aqueous phase and transformation of gaseous HNO{sub 3} into NO{sub x} in a cloud. This model is applied for exploration of aircraft exhausts evolution in plume inside a cloud. (author) 10 refs.

  5. Potential transformation of trace species including aircraft exhaust in a cloud environment. The `Chedrom model`

    Energy Technology Data Exchange (ETDEWEB)

    Ozolin, Y E; Karol, I L [Main Geophysical Observatory, St. Petersburg (Russian Federation); Ramaroson, R [Office National d` Etudes et de Recherches Aerospatiales (ONERA), 92 - Chatillon (France)

    1998-12-31

    Box model for coupled gaseous and aqueous phases is used for sensitivity study of potential transformation of trace gases in a cloud environment. The rate of this transformation decreases with decreasing of pH in droplets, with decreasing of photodissociation rates inside the cloud and with increasing of the droplet size. Model calculations show the potential formation of H{sub 2}O{sub 2} in aqueous phase and transformation of gaseous HNO{sub 3} into NO{sub x} in a cloud. This model is applied for exploration of aircraft exhausts evolution in plume inside a cloud. (author) 10 refs.

  6. A combined vector potential-scalar potential method for FE computation of 3D magnetic fields in electrical devices with iron cores

    Science.gov (United States)

    Wang, R.; Demerdash, N. A.

    1991-01-01

    A method of combined use of magnetic vector potential based finite-element (FE) formulations and magnetic scalar potential (MSP) based formulations for computation of three-dimensional magnetostatic fields is introduced. In this method, the curl-component of the magnetic field intensity is computed by a reduced magnetic vector potential. This field intensity forms the basic of a forcing function for a global magnetic scalar potential solution over the entire volume of the region. This method allows one to include iron portions sandwiched in between conductors within partitioned current-carrying subregions. The method is most suited for large-scale global-type 3-D magnetostatic field computations in electrical devices, and in particular rotating electric machinery.

  7. Global to local genetic diversity indicators of evolutionary potential in tree species within and outside forests

    DEFF Research Database (Denmark)

    Graudal, Lars; Aravanopoulos, Filippos; Bennadji, Zohra

    2014-01-01

    -monitoring schemes. Here, we provide a review and an assessment of the different attempts made to provide such indicators for tree genetic diversity from the global level down to the level of the management unit. So far, no generally accepted indicators have been provided as international standards, nor tested...... for their possible use in practice. We suggest that indicators for monitoring genetic diversity and dynamics should be based on ecological and demographic surrogates of adaptive diversity as well as genetic markers capable of identifying genetic erosion and gene flow. A comparison of past and present genecological...... distributions (patterns of genetic variation of key adaptive traits in the ecological space) of selected species is a realistic way of assessing the trend of intra-specific variation, and thus provides a state indicator of tree genetic diversity also able to reflect possible pressures threatening genetic...

  8. Atrial fibrillation in the elderly: the potential contribution of reactive oxygen species

    Science.gov (United States)

    Schillinger, Kurt J.; Patel, Vickas V.

    2012-01-01

    Atrial fibrillation (AF) is the most commonly encountered cardiac arrhythmia, and is a significant source of healthcare expenditures throughout the world. It is an arrhythmia with a very clearly defined predisposition for individuals of advanced age, and this fact has led to intense study of the mechanistic links between aging and AF. By promoting oxidative damage to multiple subcellular and cellular structures, reactive oxygen species (ROS) have been shown to induce the intra- and extra-cellular changes necessary to promote the pathogenesis of AF. In addition, the generation and accumulation of ROS have been intimately linked to the cellular processes which underlie aging. This review begins with an overview of AF pathophysiology, and introduces the critical structures which, when damaged, predispose an otherwise healthy atrium to AF. The available evidence that ROS can lead to damage of these critical structures is then reviewed. Finally, the evidence linking the process of aging to the pathogenesis of AF is discussed. PMID:23341843

  9. High genetic diversity in a potentially vulnerable tropical tree species despite extreme habitat loss.

    Directory of Open Access Journals (Sweden)

    Annika M E Noreen

    Full Text Available Over the last 150 years, Singapore's primary forest has been reduced to less than 0.2% of its previous area, resulting in extinctions of native flora and fauna. Remaining species may be threatened by genetic erosion and inbreeding. We surveyed >95% of the remaining primary forest in Singapore and used eight highly polymorphic microsatellite loci to assess genetic diversity indices of 179 adults (>30 cm stem diameter, 193 saplings (>1 yr, and 1,822 seedlings (<1 yr of the canopy tree Koompassia malaccensis (Fabaceae. We tested hypotheses relevant to the genetic consequences of habitat loss: (1 that the K. malaccensis population in Singapore experienced a genetic bottleneck and a reduction in effective population size, and (2 K. malaccensis recruits would exhibit genetic erosion and inbreeding compared to adults. Contrary to expectations, we detected neither a population bottleneck nor a reduction in effective population size, and high genetic diversity in all age classes. Genetic diversity indices among age classes were not significantly different: we detected overall high expected heterozygosity (He = 0.843-0.854, high allelic richness (R = 16.7-19.5, low inbreeding co-efficients (FIS = 0.013-0.076, and a large proportion (30.1% of rare alleles (i.e. frequency <1%. However, spatial genetic structure (SGS analyses showed significant differences between the adults and the recruits. We detected significantly greater SGS intensity, as well as higher relatedness in the 0-10 m distance class, for seedlings and saplings compared to the adults. Demographic factors for this population (i.e. <200 adult trees are a cause for concern, as rare alleles could be lost due to stochastic factors. The high outcrossing rate (tm = 0.961, calculated from seedlings, may be instrumental in maintaining genetic diversity and suggests that pollination by highly mobile bee species in the genus Apis may provide resilience to acute habitat loss.

  10. VOC species and emission inventory from vehicles and their SOA formation potentials estimation in Shanghai, China

    Science.gov (United States)

    Huang, C.; Wang, H. L.; Li, L.; Wang, Q.; Lu, Q.; de Gouw, J. A.; Zhou, M.; Jing, S. A.; Lu, J.; Chen, C. H.

    2015-10-01

    Volatile organic compound (VOC) species from vehicle exhausts and gas evaporation were investigated by chassis dynamometer and on-road measurements of nine gasoline vehicles, seven diesel vehicles, five motorcycles, and four gas evaporation samples. The secondary organic aerosol (SOA) mass yields of gasoline, diesel, motorcycle exhausts, and gas evaporation were estimated based on the mixing ratio of measured C2-C12 VOC species and inferred carbon number distributions. High aromatic contents were measured in gasoline exhausts and contributed comparatively more SOA yield. A vehicular emission inventory was compiled based on a local survey of on-road traffic in Shanghai and real-world measurements of vehicle emission factors from previous studies in the cities of China. The inventory-based vehicular organic aerosol (OA) productions to total CO emissions were compared with the observed OA to CO concentrations (ΔOA / ΔCO) in the urban atmosphere. The results indicate that vehicles dominate the primary organic aerosol (POA) emissions and OA production, which contributed about 40 and 60 % of OA mass in the urban atmosphere of Shanghai. Diesel vehicles, which accounted for less than 20 % of vehicle kilometers of travel (VKT), contribute more than 90 % of vehicular POA emissions and 80-90 % of OA mass derived by vehicles in urban Shanghai. Gasoline exhaust could be an important source of SOA formation. Tightening the limit of aromatic content in gasoline fuel will be helpful to reduce its SOA contribution. Intermediate-volatile organic compounds (IVOCs) in vehicle exhausts greatly contribute to SOA formation in the urban atmosphere of China. However, more experiments need to be conducted to determine the contributions of IVOCs to OA pollution in China.

  11. Electrochemical Determination of the Antioxidant Potential of Some Less Common Fruit Species

    Directory of Open Access Journals (Sweden)

    Boris Krska

    2008-11-01

    Full Text Available Various berries and fruit types of less common fruit species are known to contain antioxidants. Consumption of high amounts of antioxidant flavonoids, which display a variety of biological properties, including antiproliferative and anti-inflammatory activity, may have a positive impact on human health, particularly for the prevention of cancer and other inflammatory diseases. In these studies, based on the hypothesis that the fruit extract with the highest content would possess significantly higher health benefits, flavonoid-rich extracts were obtained from some less common fruit species – Blue Honeysuckles (Lonicera Kamtschatica and Lonicera edulis, Turcz. ex. Freyn, Saskatoon berry (Amelanchier alnifolia Nutt. and Chinese Hawthorn (Crataegus pinnatifida BUNGE – grown from germplasm held at the Mendel University of Agriculture and Forestry in Brno, Czech Republic and then characterized in terms of biological value based on the results from a relative antioxidant capacity assessment. The antioxidant content evaluation was based on the total flavonoid amount, determined by liquid chromatography with electrochemical detection (HPLC-ED. A DPPH• test was applied as a reference. The antioxidant content measured in Chinese Hawthorn fruit extract identified it as a potent source of flavonoid antioxidants, with a content 9-fold higher than that seen in Amelanchier fruit. The multifunctional HPLC-ED array method coupled with a DPPH• reference appears to be the optimal analytical progress, accurately reflecting the nutritivetherapeutic properties of a fruit.

  12. Methods for the Evaluation of the Bioactivity and Biocontrol Potential of Species of Trichoderma.

    Science.gov (United States)

    Steyaert, Johanna; Hicks, Emily; Kandula, Janaki; Kandula, Diwakar; Alizadeh, Hossein; Braithwaite, Mark; Yardley, Jessica; Mendoza-Mendoza, Artemio; Stewart, Alison

    2016-01-01

    Members of the genus Trichoderma comprise the majority of commercial fungal biocontrol agents of plant diseases. As such, there is a wealth of information available on the analysis of their biocontrol potential and the mechanisms behind their superior abilities. This chapter aims to summarize the most common methods utilized within a Trichoderma biocontrol program for assessing the biological properties of individual strains.

  13. Population genetics of the potentially invasive African fruit fly species, Ceratitis rosa and Ceratitis fasciventris (Diptera: Tephritidae).

    Science.gov (United States)

    Baliraine, F N; Bonizzoni, M; Guglielmino, C R; Osir, E O; Lux, S A; Mulaa, F J; Gomulski, L M; Zheng, L; Quilici, S; Gasperi, G; Malacrida, A R

    2004-03-01

    A set of 10 microsatellite markers was used to survey the levels of genetic variability and to analyse the genetic aspects of the population dynamics of two potentially invasive pest fruit fly species, Ceratitis rosa and C. fasciventris, in Africa. The loci were derived from the closely related species, C. capitata. The degree of microsatellite polymorphism in C. rosa and C. fasciventris was extensive and comparable to that of C. capitata. In C. rosa, the evolution of microsatellite polymorphism in its distribution area reflects the colonization history of this species. The mainland populations are more polymorphic than the island populations. Low levels of differentiation were found within the Africa mainland area, while greater levels of differentiation affect the islands. Ceratitis fasciventris is a central-east African species. The microsatellite data over the Uganda/Kenya spatial scale suggest a recent expansion and possibly continuing gene flow within this area. The microsatellite variability data from C. rosa and C. fasciventris, together with those of C. capitata, support the hypothesis of an east African origin of the Ceratitis spp.

  14. Gregarines (Apicomplexa, Gregarinasina) in psocids (Insecta, Psocoptera) including a new species description and their potential use as pest control agents.

    Science.gov (United States)

    Rueckert, Sonja; Devetak, Dušan

    2017-08-01

    Gregarine apicomplexans are unicellular organisms that infect invertebrate hosts in marine, freshwater and terrestrial habitats. The largest group of invertebrates infested on land is the insects. The insect order Psocoptera (booklice) has recently gained wider interest due to specimens occurring in stored food products and therefore being considered pest organisms. Biological control agents are often used to eliminate pest organisms. In this study we examined the psocid Dorypteryx domestica, an invasive psocid species that is spreading all over the world. We were able to isolate and describe a new gregarine species (Enterocystis dorypterygis sp. n.) infecting D. domestica. The trophozoites are panduri- or pyriform and their association/syzygy is caudo-frontal. The surface is inscribed by longitudinal epicytic folds covering the complete cell. Phylogenetic analyses of the SSU rDNA gene revealed an only weakly supported relationship with two Gregarina species G. ormieri and G. basiconstrictonea, both from tenebrionid beetles. Gregarines have been proposed to have some potential as biological control agents for several insects. Identifying the gregarine species infecting pest organisms like psocids is a first step and prerequisite for the probable utilization of these parasites as biological control agents in the future. Copyright © 2017 Elsevier GmbH. All rights reserved.

  15. Shark attacks in Dakar and the Cap Vert Peninsula, Senegal: low incidence despite high occurrence of potentially dangerous species.

    Science.gov (United States)

    Trape, Sébastien

    2008-01-30

    The International Shark Attack File mentions only four unprovoked shark attacks on the coast of West Africa during the period 1828-2004, an area where high concentrations of sharks and 17 species potentially dangerous to man have been observed. To investigate if the frequency of shark attacks could be really low and not just under-reported and whether there are potentially sharks that might attack in the area, a study was carried out in Dakar and the Cap Vert peninsula, Senegal. Personnel of health facilities, administrative services, traditional authorities and groups of fishermen from the region of Dakar were interviewed about the occurrence of shark attacks, and visual censuses were conducted along the coastline to investigate shark communities associated with the coasts of Dakar and the Cap Vert peninsula. Six attacks were documented for the period 1947-2005, including two fatal ones attributed to the tiger shark Galeocerdo cuvieri. All attacks concerned fishermen and only one occurred after 1970. Sharks were observed year round along the coastline in waters 3-15 m depth. Two species potentially dangerous for man, the nurse shark Ginglymostoma cirratum and the blacktip shark Carcharhinus limbatus, represented together 94% of 1,071 sharks enumerated during 1,459 hours of observations. Threatening behaviour from sharks was noted in 12 encounters (1.1%), including 8 encounters with C. limbatus, one with Galeocerdo cuvieri and 3 with unidentified sharks. These findings suggest that the frequency of shark attacks on the coast of West Africa is underestimated. However, they also indicate that the risk is very low despite the abundance of sharks. In Dakar area, most encounters along the coastline with potentially dangerous species do not result in an attack. Compared to other causes of water related deaths, the incidence of shark attack appears negligible, at least one thousand fold lower.

  16. Shark attacks in Dakar and the Cap Vert Peninsula, Senegal: low incidence despite high occurrence of potentially dangerous species.

    Directory of Open Access Journals (Sweden)

    Sébastien Trape

    Full Text Available BACKGROUND: The International Shark Attack File mentions only four unprovoked shark attacks on the coast of West Africa during the period 1828-2004, an area where high concentrations of sharks and 17 species potentially dangerous to man have been observed. To investigate if the frequency of shark attacks could be really low and not just under-reported and whether there are potentially sharks that might attack in the area, a study was carried out in Dakar and the Cap Vert peninsula, Senegal. METHODOLOGY/PRINCIPAL FINDINGS: Personnel of health facilities, administrative services, traditional authorities and groups of fishermen from the region of Dakar were interviewed about the occurrence of shark attacks, and visual censuses were conducted along the coastline to investigate shark communities associated with the coasts of Dakar and the Cap Vert peninsula. Six attacks were documented for the period 1947-2005, including two fatal ones attributed to the tiger shark Galeocerdo cuvieri. All attacks concerned fishermen and only one occurred after 1970. Sharks were observed year round along the coastline in waters 3-15 m depth. Two species potentially dangerous for man, the nurse shark Ginglymostoma cirratum and the blacktip shark Carcharhinus limbatus, represented together 94% of 1,071 sharks enumerated during 1,459 hours of observations. Threatening behaviour from sharks was noted in 12 encounters (1.1%, including 8 encounters with C. limbatus, one with Galeocerdo cuvieri and 3 with unidentified sharks. CONCLUSIONS/SIGNIFICANCE: These findings suggest that the frequency of shark attacks on the coast of West Africa is underestimated. However, they also indicate that the risk is very low despite the abundance of sharks. In Dakar area, most encounters along the coastline with potentially dangerous species do not result in an attack. Compared to other causes of water related deaths, the incidence of shark attack appears negligible, at least one thousand

  17. Phaeobacter piscinae sp. nov., a species of the Roseobacter group and potential aquaculture probiont.

    Science.gov (United States)

    Sonnenschein, Eva Christina; Phippen, Christopher Broughton William; Nielsen, Kristian Fog; Mateiu, Ramona Valentina; Melchiorsen, Jette; Gram, Lone; Overmann, Jörg; Freese, Heike M

    2017-11-01

    Four heterotrophic, antimicrobial, motile, marine bacterial strains, 27-4 T , 8-1, M6-4.2 and S26, were isolated from aquaculture units in Spain, Denmark and Greece. All four strains produced the antibiotic compound tropodithietic acid, which is a key molecule in their antagonism against fish pathogenic bacteria. Cells of the strains were Gram-reaction-negative, rod-shaped and formed star-shaped aggregates in liquid culture and brown-coloured colonies on marine agar. The predominant cellular fatty acids were C18 : 1ω7c, C16 : 0, C11 methyl C18 : 1ω7c and C16 : 0 2-OH, and the polar lipids comprised phosphatidylglycerol, diphosphatidylglycerol, phosphatidylethanolamine, phosphatidylcholine, an aminolipid, a phospholipid and an unidentified lipid. The strains grew optimally at 31-33 °C. Growth was observed at a salt concentration between 0.5 and 5-6 % NaCl with an optimum at 2-3 %. The pH range for growth of the strains was from pH 6 to 8-8.5 with an optimum at pH 7. Based on 16S rRNA gene sequence analysis, the strains are affiliated with the genus Phaeobacter. The genome sequences of the strains have a DNA G+C content of 60.1 % and share an average nucleotide identity (ANI) of more than 95 %. The four strains are distinct from the type strains of the closely related species Phaeobactergallaeciensis and Phaeobacterinhibens based on an ANI of 90.5-91.7 and 89.6-90.4 %, respectively, and an in silico DNA-DNA hybridization relatedness of 43.9-46.9 and 39.8-41.9 %, respectively. On the basis of phylogenetic analyses as well as phenotypic and chemotaxonomic properties, the isolates are considered to represent a novel species, for which the name Phaeobacter piscinae sp. nov. is proposed. The type strain is 27-4 T (=DSM 103509 T =LMG 29708 T ).

  18. Antimicrobial potential of two traditional herbometallic drugs against certain pathogenic microbial species.

    Science.gov (United States)

    Wijenayake, A U; Abayasekara, C L; Pitawala, H M T G A; Bandara, B M R

    2016-09-15

    Mineral based preparations are widely used for centuries as antimicrobial agents. However, the efficacy and the mode of action of mineral based preparations are uncertain due to the insufficient antimicrobial studies. Arogyawardhana Vati (AV) and Manikya Rasa (MR) are such two Rasashastra herbo-minerallic drugs commonly in India and other countries in South Asia. Despite of their well known traditional use of skin diseases, reported antimicrobial and mineralogical studies are limited. Therefore, in this study antimicrobial activities of the drugs and their organic, inorganic fractions were evaluated against Pseudomonas aeruginosa, Escherischia coli, Staphylococcus aureus, Methecilline Resistance Staphylococcus aureus - MRSA and Candida albicans. Antimicrobial activity of the drugs, their inorganic residues and organic extracts were determined using four assay techniques viz agar well diffusion, modified well diffusion, Miles and Misra viable cell counting and broth turbidity measurements. Mineralogical constituents of the drugs were determined using X-ray diffraction, while total cation constituents and water soluble cation constituents were determined using inductively coupled plasma-mass spectrometer and the atomic absorption spectrophotometer respectively. Thermogravimetric analysis was used to determine the weight percentages of organic and inorganic fraction of the drugs. Particle sizes of the drugs were determined using the particle size analyzer. AV and MR drugs showed antibacterial activity against both gram positive and gram negative bacterial species when analyzed separately. Inorganic residues of the drugs and organic extracts showed activity at least against two or more bacterial species tested. All tested components were inactive against C. albicans. Common mineral constituents of drugs are cinnabar, biotite and Fe-rich phases. Drugs were rich in essential elements such as Na, K, Ca, Mg and Fe and toxic elements such as Zn, Cu and As. However, the

  19. Potential ramifications of the global economic crisis on human-mediated dispersal of marine non-indigenous species.

    Science.gov (United States)

    Floerl, Oliver; Coutts, Ashley

    2009-11-01

    The global economy is currently experiencing one of its biggest contractions on record. A sharp decline in global imports and exports since 2008 has affected global merchant vessel traffic, the principal mode of bulk commodity transport around the world. During the first quarter of 2009, 10% and 25% of global container and refrigerated vessels, respectively, were reported to be unemployed. A large proportion of these vessels are lying idle at anchor in the coastal waters of South East Asia, sometimes for periods of greater than 3 months. Whilst at anchor, the hulls of such vessels will develop diverse and extensive assemblages of marine biofouling species. Once back in service, these vessels are at risk of transporting higher-than-normal quantities of marine organisms between their respective global trading ports. We discuss the potential ramifications of the global economic crisis on the spread of marine non-indigenous species via global commercial shipping.

  20. Biomonitoring potential of five sympatric Tillandsia species for evaluating urban metal pollution (Cd, Hg and Pb)

    Science.gov (United States)

    Sánchez-Chardi, Alejandro

    2016-04-01

    The present study quantifies non essential heavy metals highly toxic for biological systems (Pb, Hg and Cd) in five autochthonous epiphytic plants from Tillandsia genus (T. recurvata, T. meridionalis, T. duratii, T. tricholepis, T. loliacea) according to different traffic levels (reference, low, medium and high polluted sites) in Asunción (Paraguay). The three metals increased in polluted sites following Pb (till 62.99 ppm in T. tricholepis) > Cd (till 1.35 ppm in T. recurvata) > Hg (till 0.36 ppm in T. recurvata) and Pb and Cd levels were directly related to traffic flow. Although the species showed similar bioaccumulation pattern (namely, higher levels of metals in polluted sites), enrichment factors (maximum EF values 37.00, 18.16, and 11.90 for Pb, Hg, and Cd, respectively) reported T. tricholepis as the most relevant bioindicator due to its wide distribution and abundance in study sites, low metal content in control site and high metal contents in polluted sites, and significant correlations with traffic density of Pb and Cd. This study emphasizes the necessity of biomonitoring air pollution in areas out of air monitoring control such as Asunción, where the high levels of metal pollution especially Pb, may represent an increment of risk for the human population inhabiting this urban area.

  1. Remediation Potential of Forest Forming Tree Species Within Northern Steppe Reclamation Stands

    Directory of Open Access Journals (Sweden)

    Zverkovskyy Vasiliy M.

    2018-03-01

    Full Text Available The aim of the research was to study the features of accumulation of heavy metals by assimilation apparatus of coniferous and deciduous arboreous plants. The research identified excess of factual concentrations for Arsenic in mining rock in relation to values stated in IPC (indicative permissible concentrations. It is stated that the metals can be divided into three groups according to their absolute content in unit of foliage biomass. The element of excessive concentration is Mn, medium concentration is characteristic for Pb and Zn and low concentration is observed for Sb, Cr, As, Cu, Ni and Sn. Calculation of coefficient of biological accumulation of the metals under research has shown its high values for Crimean pine. The data presented for Black locust indicate low values of coefficient of biological accumulation, which is best noticeable for Chromium, Antimony and Tin. It is determined that a small amount of Sb and Sn are a subject to uptake by Black locust leaves, whilst for Crimean pine needles, Sb and As are characterised by the lowest inflow. The average content of lead is 209.11 kg·ha−1 for Crimean pine in all age groups of trees, whilst for Black locust, this index is only 15.52 kg·ha−1, which is 13.5 times less. Zinc accumulation is better performed by Black locust leaves, and it gradually decreases with increasing age. No definite trend of redistribution and subsequent accumulation of copper depending on tree species and age was found.

  2. Experimental comparison of pathogenic potential of two sibling species Anisakis simplex s.s. and Anisakis pegreffii in Wistar rat.

    Science.gov (United States)

    del Carmen Romero, María; Valero, Adela; Navarro-Moll, María Concepción; Martín-Sánchez, Joaquina

    2013-08-01

    There are little data available on the pathology caused by the sibling species Anisakis simplex s.s. and Anisakis pegreffii. The differences shown in their ability to penetrate the muscle of fish may also be manifested in humans. The purpose of this study is to confirm possible differences in pathogenicity between A. simplex s.s. and A. pegreffii using an experimental model which simulates infection in humans. Female Wistar rats were infected with 190 Anisakis type I L3 larvae from the Iberian coastline. After the animal was sacrificed, these L3 larvae were then recovered and identified via PCR-RFLP of the ITS1-5.8S-ITS2. A logistic regression analysis was performed searching for association between experimental pathogenic potential and species. The distribution of A. simplex s.s. and A. pegreffii between Atlantic and Mediterranean waters of the Iberian Peninsula showed statistically significant differences (P  0.3). 21.6% showed pathogenic potential, interpreted as the capacity of the larvae to cause lesions, stick to the gastrointestinal wall or penetrate it. The species variable showed association with the pathogenic role of the larva (P = 0.008). Taking A. simplex s.s. as our reference, the OR for A. pegreffii is 0.351 (P = 0.028). Despite this difference, A. pegreffii is also capable of causing anisakiasis, being responsible for 14.3% of the penetrations of the gastric mucosa found in rats, which justifies both species being considered aetiologic agents of this parasitic disorder. © 2013 John Wiley & Sons Ltd.

  3. Occurrence of potential pathogenic Aeromonas species in tropical seafood, aquafarms and mangroves off Cochin coast in South India

    Directory of Open Access Journals (Sweden)

    Alphonsa Vijaya Joseph

    2013-12-01

    Full Text Available Background: The genus Aeromonas include gram-negative, motile, facultative anaerobic, rod shaped and oxidase positive bacteria comprising several species, associated with the aquatic environment. Aeromonas species have been implicated in human pathogenesis and are linked with gastroenteritis, muscle infections, septicemia, and skin diseases. In fish they are renowned as enteric pathogens causing haemorrhagic septicemia, fin rot, soft tissue rot and furunculosis resulting in major die-offs and fish kills. Aim: This study reports the occurrence of potential pathogenic Aeromonas sp. in tropical seafood (Squids, Prawns and Mussels, aquafarms and mangroves of Cochin, Kerala, South India. Materials and Methods :Tropical seafood (Squid, Prawn and Mussel, sediment and water samples from aquafarms and associated mangroves were screened for Aeromonas contamination. The isolates were identified by 16S rDNA sequence analysis and subjected to morphological and biochemical characterization. Haemolytic assay was used for determining pathogenicity of the organisms. Antibiotic susceptibility against 12 antibiotics were performed and the MAR index was calculated. Results: A total of 134 isolates were recovered from the samples of which 15 were identified as Aeromonas species by 16S rDNA sequence analysis and were assigned to 5 species namely, A. hydrophila, A. enteropelogenes, A. caviae, A. punctataand A. aquarorium. Morphological, biochemical and phylogenetic analyses revealed relatedness and variability among the strains. All the isolates were haemolytic on blood agar indicating their pathogenicity. The isolates exhibited varying degrees of resistance to vancomycin (86.66%, ampicillin (46.66%, nalidixic acid (20%, tetracycline (6.66%, co-trimaxozole (6.66% and rifampicin (6.66% and were susceptible to antibiotics like gentamycin, streptomycin, trimethoprim, azithromycin, cefixime and chloramphenicol. 20% of Aeromonas sp. showed MAR index > 0.2 indicative of the

  4. Modeling impacts of human footprint and soil variability on the potential distribution of invasive plant species in different biomes

    Science.gov (United States)

    Wan, Ji-Zhong; Wang, Chun-Jing; Yu, Fei-Hai

    2017-11-01

    Human footprint and soil variability may be important in shaping the spread of invasive plant species (IPS). However, until now, there is little knowledge on how human footprint and soil variability affect the potential distribution of IPS in different biomes. We used Maxent modeling to project the potential distribution of 29 IPS with wide distributions and long introduction histories in China based on various combinations of climatic correlates, soil characteristics and human footprint. Then, we evaluated the relative importance of each type of environmental variables (climate, soil and human footprint) as well as the difference in range and similarity of the potential distribution of IPS between different biomes. Human footprint and soil variables contributed to the prediction of the potential distribution of IPS, and different types of biomes had varying responses and degrees of impacts from the tested variables. Human footprint and soil variability had the highest tendency to increase the potential distribution of IPS in Montane Grasslands and Shrublands. We propose to integrate the assessment in impacts of human footprint and soil variability on the potential distribution of IPS in different biomes into the prevention and control of plant invasion.

  5. Relationship between the adsorption species of cesium and radiocesium interception potential in soils and minerals: an EXAFS study

    International Nuclear Information System (INIS)

    Fan, Qiaohui; Yamaguchi, Noriko; Tanaka, Masato; Tsukada, Hirofumi; Takahashi, Yoshio

    2014-01-01

    This study examined the radiocesium (RCs) interception potential (RIP), cation exchange capacity (CEC), total organic carbon (TOC) content, and adsorption species in soils and minerals by using extended X-ray absorption fine structure (EXAFS) spectroscopy. The RIP related to Cs + adsorption by frayed-edge site (FES) has often been used to measure the mobility and bioavailability of RCs in the environment. This study found that the presence of organic matter (OM) can reduce RIP to a certain extent. The adsorption amount (=Q T ) in soil was obviously correlated to RIP at a small [Cs + ] region, whereas a linear relationship between Q T and CEC was observed at a large [Cs + ] region. Both the inner-sphere (IS) and outer-sphere (OS) complexes of Cs + were observed through EXAFS at a molecular scale. The linear correlation between log (RIP/CEC) and the ratio of the coordination number (CN) of IS (=CN IS ) and OS (=CN OS ) complexes noted as CN IS /(CN IS + CN OS ) suggested that the ratio of CN is very sensitive to Cs + adsorption species with variable RIP and CEC. The adsorption species of Cs + in soil was mainly dependent on the clay mineral content of soil. RIP was affected not only by FES but also by other strong adsorption sites, such as the interlayers and cavities identified as the IS complex in EXAFS analysis. Findings indicated that the EXAFS approach is a powerful and efficient tool to explore the behavior of Cs + in a given environment. - Highlights: • The relationship of Cs + species on soils and minerals and RIP was firstly clarified in this study. • Coordination number of Cs + was very sensitive to Cs + adsorption species with variable RIP and CEC. • This finding can be used as a basis for understanding of Cs + behavior in nature

  6. Morphology of immature stages of blow fly, Lucilia sinensis Aubertin (Diptera: Calliphoridae), a potential species of forensic importance.

    Science.gov (United States)

    Sanit, Sangob; Sukontason, Kom; Kurahashi, Hiromu; Tomberlin, Jeffery K; Wannasan, Anchalee; Kraisittipanit, Rungroj; Sukontason, Kabkaew L

    2017-12-01

    Lucilia sinensis Aubertin (Diptera: Calliphoridae) is a blow fly species of potential forensic importance since adults are attracted to, and colonize, decomposing vertebrate remains. Blow fly larvae associated with human corpses can be useful evidence in forensic investigations; however, their use is dependent in most cases on proper species identification and availability of developmental data. For identification, morphological information on each life stage is traditionally used. We used scanning electron microscopy (SEM) to examine the ultrastructure of eggs, all instars, and puparia, of L. sinensis. The important characteristics used to differentiate L. sinensis from other species are provided. Distinctive features of the eggs are the slight widening median area extending almost the entire length. The last abdominal segment of the first instar bears elongated outer ventral tubercles along the rim of the last abdominal segment. These tubercles, as well as the well developed median and outer dorsal tubercles, are more prominent in the second and third instars. The surface integument of the tubercles is equipped with circular rows of microtrichia. Pairs of inner dorsal tubercle are absent. Each anterior spiracle is comprised of 9-12 papillae arrange in a single row in the second and third instars. As for the third instar, the dorsal spines between the first and second thoracic segments are delicate, narrow, small, and close together (as row or set). The peristigmatic tufts adjacent to the posterior spiracle of the third instar are moderately branches of short, fine hairs, but minute in puparia. In conclusion, the prominent outer ventral tubercle in all instars and puparia is a new diagnostic feature of L. sinensis and helpful in differentiating it from other Lucilia species that are forensically important. The description of immature L. sinensis in this study will be useful for forensic entomologists in countries where this species exists. Copyright © 2017

  7. Detection of a Potential New Bartonella Species "Candidatus Bartonella rondoniensis" in Human Biting Kissing Bugs (Reduviidae; Triatominae.

    Directory of Open Access Journals (Sweden)

    Maureen Laroche

    2017-01-01

    Full Text Available Among the Reduviidae family, triatomines are giant blood-sucking bugs. They are well known in Central and South America where they transmit Trypanosoma cruzi to mammals, including humans, through their feces. This parasitic protozoan is the causative agent of Chagas disease, a major public health issue in endemic areas. Because of the medical and economic impact of Chagas disease, the presence of other arthropod-borne pathogens in triatomines was rarely investigated.In this study, seven triatomines species involved in the transmission of T. cruzi were molecularly screened for the presence of known pathogens generally associated with arthropods, such as Rickettsia, Bartonella, Anaplasmataceae, Borrelia species and Coxiella burnetii. Of all included triatomine species, only Eratyrus mucronatus specimens tested positive for Bartonella species for 56% of tested samples. A new genotype of Bartonella spp. was detected in 13/23 Eratyrus mucronatus specimens, an important vector of T. cruzi to humans. This bacterium was further characterized by sequencing fragments of the ftsZ, gltA and rpoB genes. Depending on the targeted gene, this agent shares 84% to 91% of identity with B. bacilliformis, the agent of Carrion's disease, a deadly sandfly-borne infectious disease endemic in South America. It is also closely related to animal pathogens such as B. bovis and B. chomelii.As E. mucronatus is an invasive species that occasionally feeds on humans, the presence of potentially pathogenic Bartonella-infected bugs could present another risk for human health, along with the T. cruzi issue.

  8. ANATOMICAL CHARACTERISTICS AND CHEMICAL PROPERTIES OF THE BRANCH-WOOD OF Schizolobium amazonicum DUCKE SPECIES AND ITS POTENTIAL USES

    Directory of Open Access Journals (Sweden)

    Yusup Amin

    2013-10-01

    Full Text Available The scale of forest degradation and deforestation in Indonesia has inspired the use of lesser-known wood species, which are potentially abundant and so far has not much been utilized. Utilization of these woods should be imposed not only of the stem wood but also of the branch-wood portions. Schizolobiumamazonicum Ducke treeis one of those lesser-known species, and growing fast with an MAIof3.68 cm/year.In Indonesia this species is only found in the Purwodadi Botanical Garden. A research was conducted to study the basic characteristics (anatomical aspects and chemical properties of the branch-wood portion of this species. The branch-wood materials were obtained from the Purwodadi Botanical Garden situated in Pasuruan (East Java. The specimens used were the first branch of the trunk (stem of nine-year old S. amazonicum tree (= 29.46 cm. The branch-wood samples were then examined for the anatomical aspects (macroscopic and microscopic characteristics and chemical properties (chemical composition. Results revealed that the anatomical properties of S.amazonicum branch-wood exhibited close similarities to those of sengon wood; it was light in appearance and white in color. Its fiber averaged about 1500 μm, and based on the fiber dimension's derived values the branch- wood fiber of this species was categorized into first-class quality for pulp and paper manufacture. Further, the chemical composition of this branch-wood compared favorably with that of sengon and mangium wood. The composition of extractive content thatsoluble in alcohol-benzene; lignin; holocellulose; and α-cellulose of this branch-wood were 2.46; 28.71; 80.64; and 50.47%, respectively. The overall assessment implied that the branch-wood portion of S.amazonicum tree affords favorable potential to be developed as raw material for pulp and paper manufacture. Also, considering that both sengon and mangium woods were already used in the pulp and paper industries as well as the trees are

  9. Revised results for geomechanical testing of MRIG-9 core for the potential SPR siting at the Richton Salt Dome.

    Energy Technology Data Exchange (ETDEWEB)

    Broome, Scott Thomas; Bauer, Stephen J.

    2010-02-01

    This report is a revision of SAND2009-0852. SAND2009-0852 was revised because it was discovered that a gage used in the original testing was mis-calibrated. Following the recalibration, all affected raw data were recalculated and re-presented. Most revised data is similar to, but slightly different than, the original data. Following the data re-analysis, none of the inferences or conclusions about the data or site relative to the SAND2009-0852 data have been changed. A laboratory testing program was developed to examine the mechanical behavior of salt from the Richton salt dome. The resulting information is intended for use in design and evaluation of a proposed Strategic Petroleum Reserve storage facility in that dome. Core obtained from the drill hole MRIG-9 was obtained from the Texas Bureau of Economic Geology. Mechanical properties testing included: (1) acoustic velocity wave measurements; (2) indirect tensile strength tests; (3) unconfined compressive strength tests; (4) ambient temperature quasi-static triaxial compression tests to evaluate dilational stress states at confining pressures of 725, 1450, 2175, and 2900 psi; and (5) confined triaxial creep experiments to evaluate the time-dependent behavior of the salt at axial stress differences of 4000 psi, 3500 psi, 3000 psi, 2175 psi and 2000 psi at 55 C and 4000 psi at 35 C, all at a constant confining pressure of 4000 psi. All comments, inferences, discussions of the Richton characterization and analysis are caveated by the small number of tests. Additional core and testing from a deeper well located at the proposed site is planned. The Richton rock salt is generally inhomogeneous as expressed by the density and velocity measurements with depth. In fact, we treated the salt as two populations, one clean and relatively pure (> 98% halite), the other salt with abundant (at times) anhydrite. The density has been related to the insoluble content. The limited mechanical testing completed has allowed us to

  10. Searching for animal models and potential target species for emerging pathogens: Experience gained from Middle East respiratory syndrome (MERS coronavirus

    Directory of Open Access Journals (Sweden)

    Júlia Vergara-Alert

    2017-06-01

    Full Text Available Emerging and re-emerging pathogens represent a substantial threat to public health, as demonstrated with numerous outbreaks over the past years, including the 2013–2016 outbreak of Ebola virus in western Africa. Coronaviruses are also a threat for humans, as evidenced in 2002/2003 with infection by the severe acute respiratory syndrome coronavirus (SARS-CoV, which caused more than 8000 human infections with 10% fatality rate in 37 countries. Ten years later, a novel human coronavirus (Middle East respiratory syndrome coronavirus, MERS-CoV, associated with severe pneumonia, arose in the Kingdom of Saudi Arabia. Until December 2016, MERS has accounted for more than 1800 cases and 35% fatality rate. Finding an animal model of disease is key to develop vaccines or antivirals against such emerging pathogens and to understand its pathogenesis. Knowledge of the potential role of domestic livestock and other animal species in the transmission of pathogens is of importance to understand the epidemiology of the disease. Little is known about MERS-CoV animal host range. In this paper, experimental data on potential hosts for MERS-CoV is reviewed. Advantages and limitations of different animal models are evaluated in relation to viral pathogenesis and transmission studies. Finally, the relevance of potential new target species is discussed.

  11. Nutrient and energy content, in vitro ruminal fermentation characteristics and methanogenic potential of alpine forage plant species during early summer.

    Science.gov (United States)

    Jayanegara, Anuraga; Marquardt, Svenja; Kreuzer, Michael; Leiber, Florian

    2011-08-15

    Plants growing on alpine meadows are reported to be rich in phenols. Such compounds may affect ruminal fermentation and reduce the plants' methanogenic potential, making alpine grazing advantageous in this respect. The objective of this study was to quantify nutrients and phenols in Alpine forage grasses, herbs and trees collected over 2 years and, in a 24 h in vitro incubation, their effects on ruminal fermentation parameters. The highest in vitro gas production, resulting in metabolisable energy values around 10 MJ kg⁻¹, were found with Alchemilla xanthochlora and Crepis aurea (herbaceous species) and with Sambucus nigra leaves and flowers (tree species). Related to the amount of total gas production, methane formation was highest with Nardus stricta, and lowest with S. nigra and A. xanthochlora. In addition, Castanea sativa leaves led to an exceptional low methane production, but this was accompanied by severely impaired ruminal fermentation. When the data were analysed by principal component analysis, phenol concentrations were negatively related with methane proportion in total gas. Variation in methane production potential across the investigated forages was small. The two goals of limited methane production potential and high nutritive value for ruminants were met best by A. xanthochlora and S. nigra. Copyright © 2011 Society of Chemical Industry.

  12. Potential extinction of Antarctic endemic fungal species as a consequence of global warming

    International Nuclear Information System (INIS)

    Selbmann, Laura; Isola, Daniela; Fenice, Massimiliano; Zucconi, Laura; Sterflinger, Katja; Onofri, Silvano

    2012-01-01

    Cryomyces spp. are fungi adapted to the harsh conditions of the McMurdo Dry Valleys in the Antarctic. The structure of their cell wall is one of the main factors for their uncommon ability to survive external stressors. The cells are, in fact, embedded in a thick and strongly melanised cell wall encrusted with black rigid plaques giving a supplementary protection and making them practically impregnable and refractory even to commercial enzymes including chitinases and glucanases. The Antarctic fungus Lecanicillium muscarium CCFEE 5003, able to produce an arsenal of lytic enzymes, including chitinases and glucanases, is known for its ability to degrade the cell walls of different food spoiling and opportunistic fungi as well as plant pathogenic Oomycota. Active cells of Cryomyces spp. were cultivated in dual culture with the mycoparasitic fungus both in liquid and solid media. Light microscope observations revealed that the cell walls of Cryomyces were heavily decayed. This resulted in the release of protoplasts. Hyphae penetration was evident with both scanning and transmission electron microscope observations. Due to its ecological amplitude (i.e. temperature growth range 0–28 °C), the parasitic fungus could easily expand its area of distribution as a consequence of global warming by invading new areas towards the interior of the continent. The establishment of interactions with organisms living at present in border ecosystems may lead to extinction of extremely specialized and poorly competitive entities. -- Highlights: ► We studied interactions among Antarctic fungi to evaluate the effects of global warming. ► Cryomyces spp. was parasitized and killed by Lecanicillum muscarium in co-cultures. ► L. muscarium lythic activities may have intriguing and new applications. ► L. muscarium may expand its area of distribution as a consequence of global warming. ► Extinction of threatened species previously living in confined niches may occur.

  13. Potential extinction of Antarctic endemic fungal species as a consequence of global warming

    Energy Technology Data Exchange (ETDEWEB)

    Selbmann, Laura, E-mail: selbmann@unitus.it [Department of Ecological and Biological Sciences (DEB), Universita degli Studi della Tuscia, Largo dell' Universita, 01100 Viterbo (Italy); Isola, Daniela; Fenice, Massimiliano; Zucconi, Laura [Department of Ecological and Biological Sciences (DEB), Universita degli Studi della Tuscia, Largo dell' Universita, 01100 Viterbo (Italy); Sterflinger, Katja [Department of Biotechnology, Austrian Center of Biological Resources and Applied Mycology (ACBR), University of Natural Resources and Life Sciences, Muthgasse 18, 1190 Wien (Austria); Onofri, Silvano [Department of Ecological and Biological Sciences (DEB), Universita degli Studi della Tuscia, Largo dell' Universita, 01100 Viterbo (Italy)

    2012-11-01

    warming. Black-Right-Pointing-Pointer Extinction of threatened species previously living in confined niches may occur.

  14. Evaluation of Diverse Microalgal Species as Potential Biofuel Feedstocks Grown Using Municipal Wastewater

    Energy Technology Data Exchange (ETDEWEB)

    Hiibel, Sage R. [Department of Biochemistry and Molecular Biology, University of Nevada Reno, Reno, NV (United States); Department of Civil and Environmental Engineering, University of Nevada Reno, Reno, NV (United States); Lemos, Mark S.; Kelly, Brian P.; Cushman, John C., E-mail: jcushman@unr.edu [Department of Biochemistry and Molecular Biology, University of Nevada Reno, Reno, NV (United States)

    2015-05-11

    Microalgae offer great potential as a third-generation biofuel feedstock, especially when grown on wastewater, as they have the dual application for wastewater treatment and as a biomass feedstock for biofuel production. The potential for growth on wastewater centrate was evaluated for forty microalgae strains from fresh (11), brackish (11), or saltwater (18) genera. Generally, freshwater strains were able to grow at high concentrations of centrate, with two strains, Neochloris pseudostigmata and Neochloris conjuncta, demonstrating growth at up to 40% v/v centrate. Fourteen of 18 salt water Dunaliella strains also demonstrated growth in centrate concentrations at or above 40% v/v. Lipid profiles of freshwater strains with high-centrate tolerance were determined using gas chromatography–mass spectrometry and compared against those obtained on cells grown on defined maintenance media. The major lipid compounds were found to be palmitic (16:0), oleic (18:1), and linoleic (18:2) acids for all freshwater strains grown on either centrate or their respective maintenance medium. These results demonstrate the highly concentrated wastewater can be used to grow microalgae, which limits the need to dilute wastewater prior to algal production. In addition, the algae produced generate lipids suitable for biodiesel or green diesel production.

  15. Chemical Characterization and Antioxidant Potential of Wild Ganoderma Species from Ghana.

    Science.gov (United States)

    Obodai, Mary; Mensah, Deborah L Narh; Fernandes, Ângela; Kortei, Nii Korley; Dzomeku, Matilda; Teegarden, Matthew; Schwartz, Steven J; Barros, Lillian; Prempeh, Juanita; Takli, Richard K; Ferreira, Isabel C F R

    2017-01-25

    The chemical characterization and antioxidant potential of twelve wild strains of Ganoderma sp. from Ghana, nine (LS1-LS9) of which were found growing wild simultaneously on the same dying Delonix regia tree, were evaluated. Parameters evaluated included the nutritional value, composition in sugars, fatty acids, phenolic and other organic compounds and some vitamins and vitamin precursors. Antioxidant potential was evaluated by investigating reducing power, radical scavenging activity and lipid peroxidation inhibition using five in vitro assays. Protein, carbohydrate, fat, ash and energy contents ranged between 15.7-24.5 g/100 g·dw, 73.31-81.90 g/100 g, 0.48-1.40 g/100 g, 0.68-2.12 g/100 g ash and 396.1-402.02 kcal/100 g, respectively. Fatty acids such as linoleic, oleic and palmitic acids were relatively abundant. Free sugars included rhamnose, fructose, mannitol, sucrose and trehalose. Total tocopherols, organic acids and phenolic compounds' content ranged between 741-3191 µg/100 g, 77-1003 mg/100 g and 7.6-489 µg/100 g, respectively. There were variations in the β-glucans, ergosterol and vitamin D₂ contents. The three major minerals in decreasing order were K > P > S. Ganoderma sp. strain AM1 showed the highest antioxidant activity. This study reveals, for the first time, chemical characteristics of Ganoderma spp. which grew simultaneously on the same tree.

  16. Evaluation of diverse microalgal species as potential biofuel feedstocks grown using municipal wastewater

    Directory of Open Access Journals (Sweden)

    Sage R Hiibel

    2015-05-01

    Full Text Available Microalgae offer great potential as a third-generation biofuel feedstock, especially when grown on wastewater, as they have the dual application for wastewater treatment and as a biomass feedstock for biofuel production. The potential for growth on wastewater centrate was evaluated for forty microalgae strains from fresh (11, brackish (11, or saltwater (18 genera. Generally, freshwater strains were able to grow at high concentrations of centrate, with two strains, Neochloris pseudostigmata and N. conjuncta, demonstrating growth at up to 40% v/v centrate. Fourteen of eighteen salt water Dunaliella strains also demonstrated growth in centrate concentrations at or above 40% v/v. Lipid profiles of freshwater strains with high-centrate tolerance were determined using gas chromatography-mass spectrometry (GC-MS and compared against those obtained on cells grown on defined maintenance media. The major lipid compounds were found to be palmitic (16:0, oleic (18:1, and linoleic (18:2 acids for all freshwater strains grown on either centrate or their respective maintenance medium. These results demonstrate the highly concentrated wastewater can be used to grow microalgae, which limits the need to dilute wastewater prior to algal production. In addition, the algae produced generate lipids suitable for biodiesel or green diesel production.

  17. Is splash erosion potential species specific? Measuring of splash erosion potential under forest in different succession stages along a biodiversity gradient in the humid subtropics

    Science.gov (United States)

    Geißler, C.; Kühn, P.; Scholten, T.

    2009-04-01

    is 2.5 times higher than in open field despite the fact that only 60 percent of open field rainfall reaches the ground. The results also indicate that sand loss is a function of the age of the specific forest stand and the variability of sand loss under different species with respect to space and time. These and future results will help managing afforestation projects in giving implications which of the species (resp. species compositions) may reduce most effectively potential splash erosion. References: Brandt, C. J. (1989): The size distribution of throughfall drops under vegetation canopies. Catena 16, p. 507-524. Calder, I. R. (2001): Canopy processes: implications for transpiration, interception and splash induced erosion, ultimately for forest management and water resources. Plant Ecology 153, p. 203-214. Ellison, W. D. (1947): Soil Erosion Studies - Part II. Soil Detachment Hazard by Raindrop Splash. Agricultural Engineering 28, p. 197-201. Foot, K.; Morgan, R. P. C. (2005): The role of leaf inclination, leaf orientation and plant canopy architecture in soil particle detachment by raindrops. Earth Surface Processes and Landforms 30, p. 1509-1520. Nanko, K.; Hotta, N. & Suzuki, M. (2006): Evaluating the influence of canopy species and meteorological factors on throughfall drop size distribution. Journal of Hydrology 329, p. 422-431. Vis, M. (1986): Interception, drop size distributions and rainfall kinetic energy in four colombian forest ecosystems. Earth Surface Processes and Landforms 11, p. 591-603.

  18. A Literature Survey to Identify Potentially Volatile Iodine-Bearing Species Present in Off-Gas Streams

    Energy Technology Data Exchange (ETDEWEB)

    Bruffey, S. H. [Oak Ridge National Lab. (ORNL), Oak Ridge, TN (United States); Spencer, B. B. [Oak Ridge National Lab. (ORNL), Oak Ridge, TN (United States); Strachan, D. M. [Strata-G, Knoxville, TN (United States); Jubin, R. T. [Oak Ridge National Lab. (ORNL), Oak Ridge, TN (United States); Soelberg, N. R. [Idaho National Lab. (INL), Idaho Falls, ID (United States); Riley, B. J. [Pacific Northwest National Lab. (PNNL), Richland, WA (United States)

    2015-06-30

    Four radionuclides have been identified as being sufficiently volatile in the reprocessing of nuclear fuel that their gaseous release needs to be controlled to meet regulatory requirements (Jubin et al. 2011, 2012). These radionuclides are 3H, 14C, 85Kr, and 129I. Of these, 129I has the longest half-life and potentially high biological impact. Accordingly, control of the release of 129I is most critical with respect to the regulations for the release of radioactive material in stack emissions. It is estimated that current EPA regulations (EPA 2010) would require any reprocessing plant in the United States to limit 129I release to less than 0.05 Ci/MTIHM for a typical fuel burnup of 55 gigawatt days per metric tonne (GWd/t) (Jubin 2011). The study of inorganic iodide in off-gas systems has been almost exclusively limited to I2 and the focus of organic iodide studies has been CH3I. In this document, we provide the results of an examination of publically available literature that is relevant to the presence and sources of both inorganic and organic iodine-bearing species in reprocessing plants. We especially focus on those that have the potential to be poorly sequestered with traditional capture methodologies. Based on the results of the literature survey and some limited thermodynamic modeling, the inorganic iodine species hypoiodous acid (HOI) and iodine monochloride (ICl) were identified as potentially low-sorbing iodine species that could present in off-gas systems. Organic species of interest included both short chain alkyl iodides such as methyl iodide (CH3I) and longer alkyl iodides up to iodododecane (C10H21I). It was found that fuel dissolution may provide conditions conducive to HOI formation and has been shown to result in volatile long-chain alkyl iodides, though these may not volatilize until later in the reprocessing sequence. Solvent extraction processes were found to be significant sources of various organic iodine-bearing species; formation of these

  19. Proteomics Core

    Data.gov (United States)

    Federal Laboratory Consortium — Proteomics Core is the central resource for mass spectrometry based proteomics within the NHLBI. The Core staff help collaborators design proteomics experiments in a...

  20. Antioxidant Potential of Vespa affinis L., a Traditional Edible Insect Species of North East India.

    Science.gov (United States)

    Dutta, Prachurjya; Dey, Tapan; Manna, Prasenjit; Kalita, Jatin

    2016-01-01

    Elevated oxidative stress plays an important role in the pathogenesis of health disorders, like arthritis. Traditionally, Vespa affinis L., a common edible insect among many tribes in North-East India, is believed to have a beneficial role in extenuating health disorders, such as arthritis. The present study investigated the molecular mechanism underlying medicinal benefit of the Aqueous Extract of Vespa affinis L. (AEVA) against oxidative stress pathophysiology. The free radical scavenging activities of AEVA were examined against DPPH, hydroxyl, and superoxide radicals and the effect on the activities of antioxidant enzyme (GST and CAT) was determined using both recombinant proteins and human plasma. The antioxidant potential of AEVA was again investigated using THP-1 monocytes. AEVA possesses a significant free radical scavenging activity as evident from the DPPH, superoxide, and hydroxyl radical scavenging assay. Incubation of AEVA (2.5, 5, 7.5, and 10 μg/μL) with the recombinant antioxidant enzymes, rGST and rCAT significantly increased the enzyme activities compared to those observed in corresponding enzyme alone or AEVA itself. AEVA supplementation (5, 7.5, and 10 μg/μL) also stimulates the activities of GST and CAT when incubated with human plasma. A cell culture study also confirmed the beneficial role of AEVA (0.8 and 1.2 μg/μL) which enhances the activities of GST and CAT, and also reduces the intercellular ROS production in monocytes treated with or without H2O2 and the effects are at par with what is observed in N-acetyl cysteine-treated cells. The antioxidant potential of the aqueous extract of Vespa affinis L. may mediate its therapeutic activities in oxidative stress-associated health disorders.

  1. Antioxidant Potential of Vespa affinis L., a Traditional Edible Insect Species of North East India.

    Directory of Open Access Journals (Sweden)

    Prachurjya Dutta

    Full Text Available Elevated oxidative stress plays an important role in the pathogenesis of health disorders, like arthritis. Traditionally, Vespa affinis L., a common edible insect among many tribes in North-East India, is believed to have a beneficial role in extenuating health disorders, such as arthritis. The present study investigated the molecular mechanism underlying medicinal benefit of the Aqueous Extract of Vespa affinis L. (AEVA against oxidative stress pathophysiology.The free radical scavenging activities of AEVA were examined against DPPH, hydroxyl, and superoxide radicals and the effect on the activities of antioxidant enzyme (GST and CAT was determined using both recombinant proteins and human plasma. The antioxidant potential of AEVA was again investigated using THP-1 monocytes.AEVA possesses a significant free radical scavenging activity as evident from the DPPH, superoxide, and hydroxyl radical scavenging assay. Incubation of AEVA (2.5, 5, 7.5, and 10 μg/μL with the recombinant antioxidant enzymes, rGST and rCAT significantly increased the enzyme activities compared to those observed in corresponding enzyme alone or AEVA itself. AEVA supplementation (5, 7.5, and 10 μg/μL also stimulates the activities of GST and CAT when incubated with human plasma. A cell culture study also confirmed the beneficial role of AEVA (0.8 and 1.2 μg/μL which enhances the activities of GST and CAT, and also reduces the intercellular ROS production in monocytes treated with or without H2O2 and the effects are at par with what is observed in N-acetyl cysteine-treated cells.The antioxidant potential of the aqueous extract of Vespa affinis L. may mediate its therapeutic activities in oxidative stress-associated health disorders.

  2. Laboratory investigations of African Pouched Rats (Cricetomys gambianus) as a potential reservoir host species for Monkeypox Virus

    Science.gov (United States)

    Hutson, Christina L.; Nakazawa, Yoshinori J.; Self, Joshua; Olson, Victoria A.; Regnery, Russell L.; Braden, Zachary; Weiss, Sonja; Malekani, Jean; Jackson, Eddie; Tate, Mallory; Karem, Kevin L.; Rocke, Tonie E.; Osorio, Jorge E.; Damon, Inger K.; Carroll, Darin S.

    2015-01-01

    Monkeypox is a zoonotic disease endemic to central and western Africa, where it is a major public health concern. Although Monkeypox virus (MPXV) and monkeypox disease in humans have been well characterized, little is known about its natural history, or its maintenance in animal populations of sylvatic reservoir(s). In 2003, several species of rodents imported from Ghana were involved in a monkeypox outbreak in the United States with individuals of three African rodent genera (Cricetomys, Graphiurus, Funisciurus) shown to be infected with MPXV. Here, we examine the course of MPXV infection in Cricetomys gambianus (pouched Gambian rats) and this rodent species’ competence as a host for the virus. We obtained ten Gambian rats from an introduced colony in Grassy Key, Florida and infected eight of these via scarification with a challenge dose of 4X104 plaque forming units (pfu) from either of the two primary clades of MPXV: Congo Basin (C-MPXV: n = 4) or West African (W-MPXV: n = 4); an additional 2 animals served as PBS controls. Viral shedding and the effect of infection on activity and physiological aspects of the animals were measured. MPXV challenged animals had significantly higher core body temperatures, reduced activity and increased weight loss than PBS controls. Viable virus was found in samples taken from animals in both experimental groups (C-MPXV and W-MPXV) between 3 and 27 days post infection (p.i.) (up to 1X108pfu/ml), with viral DNA found until day 56 p.i. The results from this work show that Cricetomys gambianus (and by inference, probably the closely related species, Cricetomys emini) can be infected with MPXV and shed viable virus particles; thus suggesting that these animals may be involved in the maintenance of MPXV in wildlife mammalian populations. More research is needed to elucidate the epidemiology of MPXV and the role of Gambian rats and other species.

  3. A deep transcriptomic resource for the copepod crustacean Labidocera madurae: A potential indicator species for assessing near shore ecosystem health.

    Directory of Open Access Journals (Sweden)

    Vittoria Roncalli

    Full Text Available Coral reef ecosystems of many sub-tropical and tropical marine coastal environments have suffered significant degradation from anthropogenic sources. Research to inform management strategies that mitigate stressors and promote a healthy ecosystem has focused on the ecology and physiology of coral reefs and associated organisms. Few studies focus on the surrounding pelagic communities, which are equally important to ecosystem function. Zooplankton, often dominated by small crustaceans such as copepods, is an important food source for invertebrates and fishes, especially larval fishes. The reef-associated zooplankton includes a sub-neustonic copepod family that could serve as an indicator species for the community. Here, we describe the generation of a de novo transcriptome for one such copepod, Labidocera madurae, a pontellid from an intensively-studied coral reef ecosystem, Kāne'ohe Bay, Oahu, Hawai'i. The transcriptome was assembled using high-throughput sequence data obtained from whole organisms. It comprised 211,002 unique transcripts, including 72,391 with coding regions. It was assessed for quality and completeness using multiple workflows. Bench-marking-universal-single-copy-orthologs (BUSCO analysis identified transcripts for 88% of expected eukaryotic core proteins. Targeted gene-discovery analyses included searches for transcripts coding full-length "giant" proteins (>4,000 amino acids, proteins and splice variants of voltage-gated sodium channels, and proteins involved in the circadian signaling pathway. Four different reference transcriptomes were generated and compared for the detection of differential gene expression between copepodites and adult females; 6,229 genes were consistently identified as differentially expressed between the two regardless of reference. Automated bioinformatics analyses and targeted manual gene curation suggest that the de novo assembled L. madurae transcriptome is of high quality and completeness. This

  4. A deep transcriptomic resource for the copepod crustacean Labidocera madurae: A potential indicator species for assessing near shore ecosystem health

    Science.gov (United States)

    Christie, Andrew E.; Sommer, Stephanie A.; Cieslak, Matthew C.; Hartline, Daniel K.; Lenz, Petra H.

    2017-01-01

    Coral reef ecosystems of many sub-tropical and tropical marine coastal environments have suffered significant degradation from anthropogenic sources. Research to inform management strategies that mitigate stressors and promote a healthy ecosystem has focused on the ecology and physiology of coral reefs and associated organisms. Few studies focus on the surrounding pelagic communities, which are equally important to ecosystem function. Zooplankton, often dominated by small crustaceans such as copepods, is an important food source for invertebrates and fishes, especially larval fishes. The reef-associated zooplankton includes a sub-neustonic copepod family that could serve as an indicator species for the community. Here, we describe the generation of a de novo transcriptome for one such copepod, Labidocera madurae, a pontellid from an intensively-studied coral reef ecosystem, Kāne‘ohe Bay, Oahu, Hawai‘i. The transcriptome was assembled using high-throughput sequence data obtained from whole organisms. It comprised 211,002 unique transcripts, including 72,391 with coding regions. It was assessed for quality and completeness using multiple workflows. Bench-marking-universal-single-copy-orthologs (BUSCO) analysis identified transcripts for 88% of expected eukaryotic core proteins. Targeted gene-discovery analyses included searches for transcripts coding full-length “giant” proteins (>4,000 amino acids), proteins and splice variants of voltage-gated sodium channels, and proteins involved in the circadian signaling pathway. Four different reference transcriptomes were generated and compared for the detection of differential gene expression between copepodites and adult females; 6,229 genes were consistently identified as differentially expressed between the two regardless of reference. Automated bioinformatics analyses and targeted manual gene curation suggest that the de novo assembled L. madurae transcriptome is of high quality and completeness. This

  5. Identification of DLD, by immunoproteomic analysis and evaluation as a potential vaccine antigen against three Vibrio species in Epinephelus coioides.

    Science.gov (United States)

    Pang, Huanying; Chen, Liming; Hoare, Rowena; Huang, Yucong; ZaoheWu; Jian, Jichang

    2016-02-24

    Vibrio spp. represent a serious threat to the culture of Epinephelus coioides (Orange-spotted Grouper) in Southeast Asia. In this study we used two-dimensional electrophoresis (2-DE) and Western blotting to identify common immunogenic proteins of Vibrio alginolyticus, Vibrio harveyi and Vibrio parahaemolyticus. Membranes were probed with orange-spotted grouper anti-V. alginolyticus sera and accordingly 60, 58 and 48 immunogenic protein spots were detected. By matching analysis for the three Western blotting membranes, 6 cross immunogenic spots for the three Vibrio species were identified. They were Outer membrane protein W (OmpW), dihydrolipoamide dehydrogenase (DLD), succinate dehydrogenase flavoprotein subunit(SDHA), elongation factor Ts(Ts), peptide ABC transporter periplasmic peptide-binding protein and phosphoenolpyruvate carboxykinase(PEPCK). One of the proteins, DLD, was used to evaluate the cross protective function for E. coioides with a bacterial immunization and challenge method. The relative percent survival rate of E. coioides against V. alginolyticus, V. harveyi and V. parahaemolyticus was 90%, 86% and 80%, respectively. This work may provide potential cross protective vaccine candidate antigens for three Vibrio species, and DLD may be considered as an effective cross-protective immunogen against three Vibrio species. Copyright © 2016. Published by Elsevier Ltd.

  6. Molecular detection and characterization of potentially new Babesia and Theileria species/variants in wild felids from Kenya.

    Science.gov (United States)

    Githaka, Naftaly; Konnai, Satoru; Kariuki, Edward; Kanduma, Esther; Murata, Shiro; Ohashi, Kazuhiko

    2012-10-01

    Piroplasms frequently infect domestic and wild carnivores. At present, there is limited information on the occurrence and molecular identity of these tick-borne parasites in wild felids in Kenya. In 2009, a pair of captive lions (Panthare leo) was diagnosed with suspected babesiosis and mineral deficiency at an animal orphanage on the outskirts of Nairobi, Kenya. Blood smears indicated presences of haemoparasites in the erythrocytes, however, no further investigations were conducted to identify the infecting agent. The animals recovered completely following diet supplementation and treatment with anti-parasite drug. In this report, we extracted and detected parasite DNA from the two lions and seven other asymptomatic feline samples; two leopards (Panthera pardus) and five cheetahs (Acinonyx jubatus). Reverse line blot with probes specific for Babesia spp. of felines indicated the presence of new Babesia species or genotypes in the lions and leopards, and unknown Theileria sp. in the cheetahs. Phylogenetic analyses using partial sequences of 18S ribosomal RNA (18S rRNA) gene showed that the parasite infecting the lions belong to the Babesia canis complex, and the parasite variant detected in the leopards clusters in a clade bearing other Babesia spp. reported in wild felids from Africa. The cheetah isolates falls in the Theileria sensu stricto group. Our findings indicate the occurrence of potentially new species or genotypes of piroplams in all three feline species. Copyright © 2012 Elsevier B.V. All rights reserved.

  7. Antiquity, botany, origin and domestication of Jatropha curcas (Euphorbiaceae), a plant species with potential for biodiesel production.

    Science.gov (United States)

    Dias, L A S; Missio, R F; Dias, D C F S

    2012-08-16

    Jatropha curcas is a multi-purpose plant species, with many advantages for biodiesel production. Its potential oil productivity is 1.9 t/ha, beginning the fourth year after planting. Nevertheless, limitations such as high harvest cost, lack of scientific konowledge and low profitability have prevented it from being utilized commercially. In order to provide information that could be useful to improve the status of this species as a bioenergy plant, we elucidated the center of origin and the center of domestication of J. curcas (Mexico). Evidence of the antiquity of knowledge of J. curcas by Olmeca people, who lived 3500-5000 years ago, reinforces its Mexican origin. The existence of non-toxic types, which only exist in that country, along with DNA studies, also strongly suggest that Mexico is the domestication center of this species. In Brazil, the Northern region of Minas Gerais State presents types with the highest oil content. Here we propose this region as a secondary center of diversity of J. curcas.

  8. Salinity critical threshold values for photosynthesis of two cosmopolitan seaweed species: providing baselines for potential shifts on seaweed assemblages.

    Science.gov (United States)

    Scherner, Fernando; Ventura, Robson; Barufi, José Bonomi; Horta, Paulo Antunes

    2013-10-01

    Climate change has increased precipitation in several South American regions leading to higher freshwater inputs into marine systems with potential to cause salinity declines along the coast. The current salinity profile on the southern coast of Brazil was surveyed during four years providing a baseline of the current salinity pattern in the region. Additionally, the effects of salinity decreases on the photosynthesis of the seaweeds Ulva lactuca and Sargassum stenophyllum were investigated in laboratory. Seaweeds were cultured at salinities 5, 15 and 34 and at the mean winter and summer temperatures. Photosynthetic performance was measured following 24 and 96 h from the beginning of experiment. U. lactuca remained practically unaltered by low salinities while S. stenophyllum presented declines of important photosynthetic parameters. This is due to the different regulation abilities of energy distribution at the PSII of the two species. These differences have potential to lead to seaweed community shifts. Copyright © 2012 Elsevier Ltd. All rights reserved.

  9. Antioxidant potential of Aesculus hippocastanum extract and escin against reactive oxygen and nitrogen species.

    Science.gov (United States)

    Vašková, J; Fejerčáková, A; Mojžišová, G; Vaško, L; Patlevič, P

    2015-01-01

    Antioxidant, anti-inflammatory and venoconstrictor properties have been attributed to extracts from Aesculus hippocastanum. These unusual and diverse properties may be possibly basically linked with ability to scavenge free radicals. The scavenging capacity of dry horse chestnut extract of and escin have been investigated in vitro against superoxide anion radicals, hydroxyl radicals, nitrites and peroxynitrite. In general, the activity of the whole extract against superoxide radicals did not exceed 15% at pH 7.4, but the highest inhibition (46.11%) was recorded against hydroxyl radicals at a concentration of 100 µg.ml-1; however, the activity against other radicals was lower. Escin demonstrated a better ability to counteract nitric oxide oxidation products, nitrites. However, the efficiency of the whole extract completely disappeared as the concentration increased. Both extracts showed very low activity towards peroxynitrite. Escin was even able to induce peroxynitrite formation at the lower concentrations used. Whole extract showed better antiradical properties compared to its main active ingredient, escin, probably due to potential synergistic interaction with a mixture of compounds present in the plant extract. These findings can be the basis of both the presentation of side-effects and the persistence of disease in spite of ongoing treatment.

  10. Boron stress response and accumulation potential of the extremely tolerant species Puccinellia frigida.

    Science.gov (United States)

    Rámila, Consuelo D P; Contreras, Samuel A; Di Domenico, Camila; Molina-Montenegro, Marco A; Vega, Andrea; Handford, Michael; Bonilla, Carlos A; Pizarro, Gonzalo E

    2016-11-05

    Phytoremediation is a promising technology to tackle boron toxicity, which restricts agricultural activities in many arid and semi-arid areas. Puccinellia frigida is a perennial grass that was reported to hyperaccumulate boron in extremely boron-contaminated sites. To further investigate its potential for phytoremediation, we determined its response to boron stress under controlled conditions (hydroponic culture). Also, as a first step towards understanding the mechanisms underlying its extreme tolerance, we evaluated the presence and expression of genes related with boron tolerance. We found that P. frigida grew normally even at highly toxic boron concentrations in the medium (500mg/L), and within its tissues (>5000mg/kg DW). We postulate that the strategies conferring this extreme tolerance involve both restricting boron accumulation and an internal tolerance mechanism; this is consistent with the identification of putative genes involved in both mechanisms, including the expression of a possible boron efflux transporter. We also found that P. frigida hyperaccumulated boron over a wide range of boron concentrations. We propose that P. frigida could be used for boron phytoremediation strategies in places with different soil characteristics and boron concentrations. Further studies should pave the way for the development of clean and low-cost solutions to boron toxicity problems. Copyright © 2016 Elsevier B.V. All rights reserved.

  11. New xenophytes from La Palma (Canary Islands, Spain, with emphasis on naturalized and (potentially invasive species

    Directory of Open Access Journals (Sweden)

    R. Otto

    2016-07-01

    Full Text Available Many years of field work in La Palma (western Canary Islands yielded a number of interesting new records of non-native vascular plants. Amaranthus blitoides, A. deflexus, Aptenia cordifolia, Argemone ochroleuca, Begonia schmidtiana, Capsella rubella, Cardamine hamiltonii, Centratherum punctatum, Cerastium fontanum subsp. vulgare, Chasmanthe floribunda (widely confused with C. aethiopica and Crocosmia xcrocosmiiflora in Macaronesia, Chenopodium probstii, Commelina latifolia var. latifolia, Dichondra micrantha, Dysphania anthelmintica, Epilobium ciliatum, Erigeron sumatrensis, Erodium neuradifolium, Eucalyptus globulus, Euphorbia hypericifolia, E. maculata, Gamochaeta antillana, Geranium pyrenaicum, Hedychium coronarium, Hypochaeris radicata, Kalanchoe daigremontiana, K. delagoensis, K. xhoughtonii, Kickxia commutata subsp. graeca, K. spuria subsp. integrifolia, Lactuca viminea subsp. ramosissima, Landoltia punctata, Malvastrum coromandelianum subsp. capitatospicatum, Oenothera jamesii, Orobanche nana, Oxalis latifolia, Papaver hybridum, P. setigerum, Pilea microphylla, Podranea ricasoliana, Polygonum arenastrum, Portulaca granulatostellulata, P. nicaraguensis, P. nitida, P. papillatostellulata, Rumex crispus subsp. crispus, R. pulcher subsp. pulcher, R. xpratensis, Sechium edule, Sida spinosa var. angustifolia, Silene nocturna, Solanum abutiloides, S. alatum, S. decipiens, Sonchus tenerrimus, Spergularia marina, Stellaria pallida, Tragopogon porrifolius subsp. australis, Tribulus terrestris and Trifolium repens subsp. repens are naturalized or (potentially invasive xenophytes, reported for the first time from either the Canary Islands or from La Palma. 37 additional, presumably ephemeral taxa are reported for the first time from the Canary Islands, whereas 56 ephemeral taxa are new for La Palma..

  12. Moringa oleifera, a species with potential analgesic and anti-inflammatory activities.

    Science.gov (United States)

    Martínez-González, Claudia Lizbeth; Martínez, Laura; Martínez-Ortiz, Efraín J; González-Trujano, María Eva; Déciga-Campos, Myrna; Ventura-Martínez, Rosa; Díaz-Reval, Irene

    2017-03-01

    Moringa oleifera has long been used in large demand in folk medicine to treat pain. The present study was undertaken to examine the antinociceptive and anti-inflammatory spectrum of M. oleifera leaf extracts discriminating the constituents' nature by using different kind of experimental models in rats. Pharmacological evaluation of a non-polar and/or polar extracts at several doses (30-300mg/kg, p.o.) was explored through experimental nociception using formalin test, carrageenan-induced paw edema and arthritis with subcutaneous injection of collagen in rats. Basic morphology characterization was done by scanning electronic microscopy and laser scanning confocal microscopy. Not only polar (from 30 or 100mg/kg, p.o.) but also non-polar extract produced significant inhibition of the nociceptive behavior with major efficacy in the inflammatory response in different assessed experimental models. This antinociceptive activity involved constituents of different nature and depended on the intensity of the induced painful stimulus. Phytochemical analysis showed the presence of kaempferol-3-glucoside in the polar extract and fatty acids like chlorogenic acid, among others, in the non-polar extract. Data obtained with M. oleifera leaf extracts give evidence of its potential for pain treatment. Copyright © 2016 Elsevier Masson SAS. All rights reserved.

  13. Determination of Germination Response to Temperature and Water Potential for a Wide Range of Cover Crop Species and Related Functional Groups.

    Science.gov (United States)

    Tribouillois, Hélène; Dürr, Carolyne; Demilly, Didier; Wagner, Marie-Hélène; Justes, Eric

    2016-01-01

    A wide range of species can be sown as cover crops during fallow periods to provide various ecosystem services. Plant establishment is a key stage, especially when sowing occurs in summer with high soil temperatures and low water availability. The aim of this study was to determine the response of germination to temperature and water potential for diverse cover crop species. Based on these characteristics, we developed contrasting functional groups that group species with the same germination ability, which may be useful to adapt species choice to climatic sowing conditions. Germination of 36 different species from six botanical families was measured in the laboratory at eight temperatures ranging from 4.5-43°C and at four water potentials. Final germination percentages, germination rate, cardinal temperatures, base temperature and base water potential were calculated for each species. Optimal temperatures varied from 21.3-37.2°C, maximum temperatures at which the species could germinate varied from 27.7-43.0°C and base water potentials varied from -0.1 to -2.6 MPa. Most cover crops were adapted to summer sowing with a relatively high mean optimal temperature for germination, but some Fabaceae species were more sensitive to high temperatures. Species mainly from Poaceae and Brassicaceae were the most resistant to water deficit and germinated under a low base water potential. Species were classified, independent of family, according to their ability to germinate under a range of temperatures and according to their base water potential in order to group species by functional germination groups. These groups may help in choosing the most adapted cover crop species to sow based on climatic conditions in order to favor plant establishment and the services provided by cover crops during fallow periods. Our data can also be useful as germination parameters in crop models to simulate the emergence of cover crops under different pedoclimatic conditions and crop

  14. Public-Private Partnership as the Core Form of the Implementation of Russia’s Transport and Transit Potential

    Directory of Open Access Journals (Sweden)

    Valery Anatolyevich Tsvetkov

    2017-03-01

    Full Text Available The article discusses the theory and practice of the implementation and development of transport and transit potential (TTP of Russia. This could be an effective way to replace the natural resource rent as the main source of income for the state and economic actors. For the modernization of national economic system the key importance are innovative technologies in the development of transport and transit potential through the organization of the production of goods and services with the highest added value in Russia. We proposed and substantiated the hypothesis about the necessity of creation of a Federal company responsible for the financing and implementation of Russia’s transport and transit potential development projects on the principles of public-private partnership (PPP. The authors have revealed the economic, institutional and organizational prerequisites for the establishment of such a public-private partnership company. We have provided the opinions of scientists and experts showing the urgent need to create in one form or another a single operator to transport goods on the territory of Russia and the Eurasian economic Union. To prove the hypothesis, we presented a description and analysis of the factors affecting the value of transit freight transport on Euro-Asian routes. We paid the special attention to identify the reasons of the increasing competitive advantage of Maritime transport in the world’s goods movement system. The authors based the main conclusion that, first of all, the created publicprivate partnership company should be large due to tough competition of developing transit freight by land routes with the global Maritime container services. Secondly, it needs a significant state participation since the management of the world’s cargo flows requires the effort of foreign policy and geo-economic nature. We emphasized that this business entity would become an active proponent and lobbyist of the most effective

  15. EFFECT OF WOOD SPECIES USED FOR CORE LAYER ON SOME PROPERTIES OF OKUME PLYWOOD PANELS BONDED WITH MELAMINE-UREA FORMALDEHYDE (MUF ADHESIVE

    Directory of Open Access Journals (Sweden)

    Cenk Demirkır

    2005-04-01

    Full Text Available In this study; changes in some properties of the okume plywood panels when used alder and beech veneers in their core layers were investigated. Two types of melamine-urea formaldehyde (MUF resins having different free formaldehyde contents were used for bonding plywood panels manufactured from 2 mm thick veneers at industrial conditions. The formaldehyde emission values of plywood panels bonded with MÜF having higher free formaldehyde content were found to be higher than those of the panels bonded with other resin type. The highest formaldehyde emission value was found for the panels manufactured from okume veneers in all layers while the lowest value was determined from the panels include beech veneers in the core layer. The shear and bending strength values of the panels consisted of beech veneers in the core layer were found to be higher than those of the panels consisted of okume and alder veneers in the core layers.

  16. Intra-species Genomic and Physiological Variability Impact Stress Resistance in Strains of Probiotic Potential.

    Science.gov (United States)

    Arnold, Jason W; Simpson, Joshua B; Roach, Jeffrey; Kwintkiewicz, Jakub; Azcarate-Peril, M Andrea

    2018-01-01

    Large-scale microbiome studies have established that most of the diversity contained in the gastrointestinal tract is represented at the strain level; however, exhaustive genomic and physiological characterization of human isolates is still lacking. With increased use of probiotics as interventions for gastrointestinal disorders, genomic and functional characterization of novel microorganisms becomes essential. In this study, we explored the impact of strain-level genomic variability on bacterial physiology of two novel human Lactobacillus rhamnosus strains (AMC143 and AMC010) of probiotic potential in relation to stress resistance. The strains showed differences with known probiotic strains ( L. rhamnosus GG, Lc705, and HN001) at the genomic level, including nucleotide polymorphisms, mutations in non-coding regulatory regions, and rearrangements of genomic architecture. Transcriptomics analysis revealed that gene expression profiles differed between strains when exposed to simulated gastrointestinal stresses, suggesting the presence of unique regulatory systems in each strain. In vitro physiological assays to test resistance to conditions mimicking the gut environment (acid, alkali, and bile stress) showed that growth of L. rhamnosus AMC143 was inhibited upon exposure to alkaline pH, while AMC010 and control strain LGG were unaffected. AMC143 also showed a significant survival advantage compared to the other strains upon bile exposure. Reverse transcription qPCR targeting the bile salt hydrolase gene ( bsh ) revealed that AMC143 expressed bsh poorly (a consequence of a deletion in the bsh promoter and truncation of bsh gene in AMC143), while AMC010 had significantly higher expression levels than AMC143 or LGG. Insertional inactivation of the bsh gene in AMC010 suggested that bsh could be detrimental to bacterial survival during bile stress. Together, these findings show that coupling of classical microbiology with functional genomics methods for the

  17. Intra-species Genomic and Physiological Variability Impact Stress Resistance in Strains of Probiotic Potential

    Directory of Open Access Journals (Sweden)

    Jason W. Arnold

    2018-02-01

    Full Text Available Large-scale microbiome studies have established that most of the diversity contained in the gastrointestinal tract is represented at the strain level; however, exhaustive genomic and physiological characterization of human isolates is still lacking. With increased use of probiotics as interventions for gastrointestinal disorders, genomic and functional characterization of novel microorganisms becomes essential. In this study, we explored the impact of strain-level genomic variability on bacterial physiology of two novel human Lactobacillus rhamnosus strains (AMC143 and AMC010 of probiotic potential in relation to stress resistance. The strains showed differences with known probiotic strains (L. rhamnosus GG, Lc705, and HN001 at the genomic level, including nucleotide polymorphisms, mutations in non-coding regulatory regions, and rearrangements of genomic architecture. Transcriptomics analysis revealed that gene expression profiles differed between strains when exposed to simulated gastrointestinal stresses, suggesting the presence of unique regulatory systems in each strain. In vitro physiological assays to test resistance to conditions mimicking the gut environment (acid, alkali, and bile stress showed that growth of L. rhamnosus AMC143 was inhibited upon exposure to alkaline pH, while AMC010 and control strain LGG were unaffected. AMC143 also showed a significant survival advantage compared to the other strains upon bile exposure. Reverse transcription qPCR targeting the bile salt hydrolase gene (bsh revealed that AMC143 expressed bsh poorly (a consequence of a deletion in the bsh promoter and truncation of bsh gene in AMC143, while AMC010 had significantly higher expression levels than AMC143 or LGG. Insertional inactivation of the bsh gene in AMC010 suggested that bsh could be detrimental to bacterial survival during bile stress. Together, these findings show that coupling of classical microbiology with functional genomics methods for the

  18. Evaluation of Potential Fungal Species for the in situ Simultaneous Saccharification and Fermentation (SSF of Cellulosic Material

    Directory of Open Access Journals (Sweden)

    Leeuwen, J.

    2011-01-01

    Full Text Available Three fungal species were evaluated for their abilities to saccharify pure cellulose. The three species chosen represented three major wood-rot molds; brown rot (Gloeophyllum trabeum, white rot (Phanerochaete chrysosporium and soft rot (Trichoderma reesei. After solid state fermentation of the fungi on the filter paper for four days, the saccharified cellulose was then fermented to ethanol by using Saccharomyces cerevisiae. The efficiency of the fungal species in saccharifying the filter paper was compared against a low dose (25 FPU/g cellulose of a commercial cellulase. Total sugar, cellobiose and glucose were monitored during the fermentation period, along with ethanol, acetic acid and lactic acid. Results indicated that the most efficient fungal species in saccharifying the filter paper was T. reesei with 5.13 g/100 g filter paper of ethanol being produced at days 5, followed by P. chrysosporium at 1.79 g/100 g filter paper. No ethanol was detected for the filter paper treated with G. trabeum throughout the five day fermentation stage. Acetic acid was only produced in the sample treated with T. reesei and the commercial enzyme, with concentration 0.95 and 2.57 g/100 g filter paper, respectively at day 5. Lactic acid production was not detected for all the fungal treated filter paper after day 5. Our study indicated that there is potential in utilizing in situ enzymatic saccharification of biomass by using T. reesei and P. chrysosporium that may lead to an economical simultaneous saccharification and fermentation process for the production of fuel ethanol.

  19. Outstanding Anti-inflammatory Potential of Selected Asteraceae Species through the Potent Dual Inhibition of Cyclooxygenase-1 and 5-Lipoxygenase.

    Science.gov (United States)

    Chagas-Paula, Daniela Aparecida; Oliveira, Tiago Branquinho; Faleiro, Danniela Príscylla Vasconcelos; Oliveira, Rejane Barbosa; Costa, Fernando Batista Da

    2015-09-01

    Cyclooxygenase and 5-lipoxygenase are enzymes that catalyze important inflammatory pathways, suggesting that dual cyclooxygenase/lipoxygenase inhibitors should be more efficacious as anti-inflammatory medicines with lower side effects than the currently available nonsteroidal anti-inflammatory drugs. Many plants from the family Asteraceae have anti-inflammatory activities, which could be exerted by inhibiting the cyclooxygenase-1 and 5-lipoxygenase enzymes. Nevertheless, only a small number of compounds from this family have been directly evaluated for their ability to inhibit the enzymes in cell-free assays. Therefore, this study systematically evaluated 57 Asteraceae extracts in vitro in enzyme activity experiments to determine whether any of these extracts exhibit dual inhibition of cyclooxygenase-1 and 5-lipoxygenase. The chemical profiles of the extracts were obtained by the high-performance liquid chromatography-ultraviolet-diode array detector method, and their major constituents were dereplicated. Of the 57 tested extracts, 13 (26.6 %, IC50 range from 0.03-36.2 µg/mL) of them displayed dual inhibition. Extracts from known anti-inflammatory herbs, food plants, and previously uninvestigated species are among the most active. Additionally, the extract action was found to be specific with IC50 values close to or below those of the standard inhibitors. Thus, the active extracts and active substances of these species are potent inhibitors acting through the mechanism of dual inhibition of cyclooxygenase-1 and 5-lipoxygenase. The extracts were prepared for this study using nontoxic extraction solvents (EtOH-H2O), requiring only a small amount of plant material to carry out the bioassays and the phytochemical analyses. In summary, this study demonstrated the potential of the investigated species as dual inhibitors, revealing their potential as pharmaceuticals or nutraceuticals. Georg Thieme Verlag KG Stuttgart · New York.

  20. Culicoides species abundance and potential over-wintering of African horse sickness virus in the Onderstepoort area, Gauteng, South Africa

    Directory of Open Access Journals (Sweden)

    Gert J. Venter

    2014-11-01

    Full Text Available In South Africa, outbreaks of African horse sickness (AHS occur in summer; no cases are reported in winter, from July to September. The AHS virus (AHSV is transmitted almost exclusively by Culicoides midges (Diptera: Ceratopogonidae, of which Culicoides imicola is considered to be the most important vector. The over-wintering mechanism of AHSV is unknown. In this study, more than 500 000 Culicoides midges belonging to at least 26 species were collected in 88 light traps at weekly intervals between July 2010 and September 2011 near horses in the Onderstepoort area of South Africa. The dominant species was C. imicola. Despite relatively low temperatures and frost, at least 17 species, including C. imicola, were collected throughout winter (June–August. Although the mean number of midges per night fell from > 50 000 (March to < 100 (July and August, no midge-free periods were found. This study, using virus isolation on cell cultures and a reverse transcriptase polymerase chain reaction (RT-PCR assay, confirmed low infection prevalence in field midges and that the detection of virus correlated to high numbers. Although no virus was detected during this winter period, continuous adult activity indicated that transmission can potentially occur. The absence of AHSV in the midges during winter can be ascribed to the relatively low numbers collected coupled to low infection prevalence, low virus replication rates and low virus titres in the potentially infected midges. Cases of AHS in susceptible animals are likely to start as soon as Culicoides populations reach a critical level.

  1. Using social media to measure the contribution of red list species to the nature-based tourism potential of African protected areas

    DEFF Research Database (Denmark)

    Willemen, Louise; Cottam, Andrew J.; Drakou, Evangelia G.

    2015-01-01

    assessments. The index directly links species presence to the tourism potential of protected areas, making the connection between nature and human benefits explicit, but excludes other important contributing factors for tourism, such as accessibility and safety. This social media based index provides a broad...... services for large areas. In this paper we explore a method to quantify cultural benefits through the enjoyment of natured-based tourism, by assessing the potential tourism attractiveness of species for each protected area in Africa using the IUCN's Red List of Threatened Species. We use the number...... most attractive to nature-based tourism are the Lion, African Elephant and Leopard. Combining the photo counts with species range data, African protected areas with the highest potential to attract wildlife tourists based on attractive species occurrence were Samburu National Reserve in Kenya, Mukogodo...

  2. Potentially toxic contamination of sediments, water and two animal species in Lake Kalimanci, FYR Macedonia: Relevance to human health

    International Nuclear Information System (INIS)

    Vrhovnik, Petra; Arrebola, Juan P.; Serafimovski, Todor; Dolenec, Tadej; Šmuc, Nastja Rogan; Dolenec, Matej; Mutch, Elaine

    2013-01-01

    The objectives of the research were: (1) to examine the concentrations of metals in Vimba melanops and Rana temporaria and (2) to evaluate the potential risks of the contaminated organisms to human health in Makedonska Kamenica region. Analyses identified high levels of Cr, Hg, Ni and Pb in studied animals, which also exceeded their permissible levels in food. In sediment and soil samples, levels of Cd, Cu, Cr, Pb, Zn and As were perceived, while Cd, Cu, Ni, Pb, Se and As were increased in water samples. Results of transfer factor revealed that the examined animals had higher bioaccumulation rate from surrounding waters than from sediments or soils. The accomplished Health Risk Index disclosed that studied animals can have considerably high health risks for inhabitants. Conclusively, they could be considered as highly contaminated with metals and can consequently harm human health, especially children in their early development stages. -- Highlights: •The study merges the accumulation of PTE in animal species, sediments, soils and water. •Correlation between different media and their impact to living organisms'. •Considerably high health risks for inhabitants. -- In the Makedonska Kamenica region had been described several potential sources of exposure therefore exists the potential threat to human health

  3. Potential 21st century changes to the mammal fauna of Denmark - implications of climate change, land-use, and invasive species

    Energy Technology Data Exchange (ETDEWEB)

    Floejgaard, Camilla; Morueta-Holme, Naia; Svenning, Jens-Christian [Ecoinformatics and Biodiversity Group, Department of Biological Sciences, Aarhus University, Ny Munkegade 114, DK-8000 Aarhus C (Denmark); Skov, Flemming; Madsen, Aksel Bo, E-mail: camilla.flojgaard@biology.au.d [Department of Wildlife Ecology and Biodiversity, National Environmental Research Institute, Aarhus University, Grenaavej 14, DK-8410 Roende (Denmark)

    2009-11-01

    The moderate temperature increase of 0.74 deg. C in the 20th century has caused latitudinal and altitudinal range shifts in many species including mammals. Therefore, given the more dramatic temperature increase predicted for the 21st century, we can therefore expect even stronger range shifts as well. However, European mammals are already faced with other anthropogenic pressures, notably habitat loss, pollution, overexploitation, and invasive species, and will have to face the combined challenge posed by climate change in a landscape highly influenced by human activities. As an example of the possible consequences of land use, invasive species, and climate change for the regional-scale mammal species composition, we here focus on the potential 21st century changes to the mammal fauna of Denmark. Supported by species distribution modelling, we present a discussion of the possible changes to the Danish mammal fauna: Which species are likely to become locally extinct? Which new species are most likely to immigrate? And, what is the potential threat from invasive species? We find that future climate change is likely to cause a general enrichment of the Danish mammal fauna by the potential immigration of seventeen new species. Only the northern birch mouse (Sicista betulina) is at risk of extinction from climate change predicted. The European native mammals are not anticipated to contribute to the invasive-species problem as they coexist with most Danish species in other parts of Europe. However, non-European invasive species are also likely to enter the Danish fauna and may negatively impact the native species.

  4. Potential 21st century changes to the mammal fauna of Denmark - implications of climate change, land-use, and invasive species

    International Nuclear Information System (INIS)

    Floejgaard, Camilla; Morueta-Holme, Naia; Svenning, Jens-Christian; Skov, Flemming; Madsen, Aksel Bo

    2009-01-01

    The moderate temperature increase of 0.74 deg. C in the 20th century has caused latitudinal and altitudinal range shifts in many species including mammals. Therefore, given the more dramatic temperature increase predicted for the 21st century, we can therefore expect even stronger range shifts as well. However, European mammals are already faced with other anthropogenic pressures, notably habitat loss, pollution, overexploitation, and invasive species, and will have to face the combined challenge posed by climate change in a landscape highly influenced by human activities. As an example of the possible consequences of land use, invasive species, and climate change for the regional-scale mammal species composition, we here focus on the potential 21st century changes to the mammal fauna of Denmark. Supported by species distribution modelling, we present a discussion of the possible changes to the Danish mammal fauna: Which species are likely to become locally extinct? Which new species are most likely to immigrate? And, what is the potential threat from invasive species? We find that future climate change is likely to cause a general enrichment of the Danish mammal fauna by the potential immigration of seventeen new species. Only the northern birch mouse (Sicista betulina) is at risk of extinction from climate change predicted. The European native mammals are not anticipated to contribute to the invasive-species problem as they coexist with most Danish species in other parts of Europe. However, non-European invasive species are also likely to enter the Danish fauna and may negatively impact the native species.

  5. Potential 21st century changes to the mammal fauna of Denmark - implications of climate change, land-use, and invasive species

    Science.gov (United States)

    Fløjgaard, Camilla; Morueta-Holme, Naia; Skov, Flemming; Madsen, Aksel Bo; Svenning, Jens-Christian

    2009-11-01

    The moderate temperature increase of 0.74 °C in the 20th century has caused latitudinal and altitudinal range shifts in many species including mammals. Therefore, given the more dramatic temperature increase predicted for the 21st century, we can therefore expect even stronger range shifts as well. However, European mammals are already faced with other anthropogenic pressures, notably habitat loss, pollution, overexploitation, and invasive species, and will have to face the combined challenge posed by climate change in a landscape highly influenced by human activities. As an example of the possible consequences of land use, invasive species, and climate change for the regional-scale mammal species composition, we here focus on the potential 21st century changes to the mammal fauna of Denmark. Supported by species distribution modelling, we present a discussion of the possible changes to the Danish mammal fauna: Which species are likely to become locally extinct? Which new species are most likely to immigrate? And, what is the potential threat from invasive species? We find that future climate change is likely to cause a general enrichment of the Danish mammal fauna by the potential immigration of seventeen new species. Only the northern birch mouse (Sicista betulina) is at risk of extinction from climate change predicted. The European native mammals are not anticipated to contribute to the invasive-species problem as they coexist with most Danish species in other parts of Europe. However, non-European invasive species are also likely to enter the Danish fauna and may negatively impact the native species.

  6. Uptake and accumulation of potentially toxic elements in colonized plant species around the world's largest antimony mine area, China.

    Science.gov (United States)

    Long, Jiumei; Tan, Di; Deng, Sihan; Lei, Ming

    2018-04-11

    To provide information on reclamation of multi-heavy metal polluted soils with conception of phytostabilization, a field survey on the uptake and accumulation of potentially toxic elements such as antimony (Sb), arsenic (As), lead (Pb), cadmium (Cd), copper (Cu), and zinc (Zn) in colonized plant species around the world's largest antimony mine area, China, was conducted. Samples including leaves and shoots (including roots and stems) of colonized plants as well as rhizospheric soils were collected from eight sampling zones in the studied area. The results showed that the contents of Cu, Zn, and Pb in rhizospheric soils below plants were comparable to the corresponding background values of Hunan province, otherwise Sb, Cd, and As contents were extremely high (17-106, 17-87, and 3-7 times of the corresponding background values). The highest concentration of Sb was found in Aster subulatus (410 mg kg -1 ); Cd, As, and Zn were in Herba bidentis bipinnatae (10.9, 264, and 265 mg kg -1 , respectively); and Cu was in Artemisia lavandulaefolia (27.1 mg kg -1 ). It also exhibited that all the contents of As in leaves were several times of those in shoots of plants, Cd and other heavy metals showed in a similar pattern in several studied species, implying that the uptake route of these heavy metals via foliar might contribute to the accumulation. With high bioconcentration factors of heavy metals (more than 1, except for Zn), together with the growth abundance, Herba bidentis bipinnatae was considered as the most suitable colonized species for phytostabilization of the multi-heavy metal pollution in soils on this antimony mine area.

  7. Assessment of Local Mosquito Species Incriminates Aedes aegypti as the Potential Vector of Zika Virus in Australia.

    Directory of Open Access Journals (Sweden)

    Sonja Hall-Mendelin

    2016-09-01

    Full Text Available Within the last 10 years Zika virus (ZIKV has caused unprecedented epidemics of human disease in the nations and territories of the western Pacific and South America, and continues to escalate in both endemic and non-endemic regions. We evaluated the vector competence of Australian mosquitoes for ZIKV to assess their potential role in virus transmission.Mosquitoes were exposed to infectious blood meals containing the prototype African ZIKV strain. After 14 days incubation at 28°C and high relative humidity, infection, dissemination and transmission rates were assessed. Infection in Culex annulirostris and Cx. sitiens could not be detected. 8% of Cx. quinquefasciatus were infected, but the virus did not disseminate in this species. Despite having infection rates > 50%, Aedes notoscriptus and Ae. vigilax did not transmit ZIKV. In contrast, Ae. aegypti had infection and transmission rates of 57% and 27%, respectively. In susceptibility trials, the virus dose required to infect 50% (ID50 of Ae. aegypti was106.4 tissue culture infectious dose50 (TCID50/mL. Additionally, a threshold viral load within the mosquito of at least 105.1 TCID50 equivalents/mL had to be reached before virus transmission occurred.We confirmed Ae. aegypti to be the most likely mosquito vector of ZIKV in Australia, although the restricted distribution of this species will limit the receptive zone to northern Queensland where this species occurs. Importantly, the role in ZIKV transmission of Culex and other Aedes spp. tested will be negligible. Despite being the implicated vector, the relatively high ID50 and need for a high titer disseminated infection in Ae. aegypti suggest that high mosquito population densities will be required to facilitate epidemic ZIKV transmission among the currently immunologically naïve human population in Australia.

  8. Assessment of Local Mosquito Species Incriminates Aedes aegypti as the Potential Vector of Zika Virus in Australia.

    Science.gov (United States)

    Hall-Mendelin, Sonja; Pyke, Alyssa T; Moore, Peter R; Mackay, Ian M; McMahon, Jamie L; Ritchie, Scott A; Taylor, Carmel T; Moore, Frederick A J; van den Hurk, Andrew F

    2016-09-01

    Within the last 10 years Zika virus (ZIKV) has caused unprecedented epidemics of human disease in the nations and territories of the western Pacific and South America, and continues to escalate in both endemic and non-endemic regions. We evaluated the vector competence of Australian mosquitoes for ZIKV to assess their potential role in virus transmission. Mosquitoes were exposed to infectious blood meals containing the prototype African ZIKV strain. After 14 days incubation at 28°C and high relative humidity, infection, dissemination and transmission rates were assessed. Infection in Culex annulirostris and Cx. sitiens could not be detected. 8% of Cx. quinquefasciatus were infected, but the virus did not disseminate in this species. Despite having infection rates > 50%, Aedes notoscriptus and Ae. vigilax did not transmit ZIKV. In contrast, Ae. aegypti had infection and transmission rates of 57% and 27%, respectively. In susceptibility trials, the virus dose required to infect 50% (ID50) of Ae. aegypti was106.4 tissue culture infectious dose50 (TCID50)/mL. Additionally, a threshold viral load within the mosquito of at least 105.1 TCID50 equivalents/mL had to be reached before virus transmission occurred. We confirmed Ae. aegypti to be the most likely mosquito vector of ZIKV in Australia, although the restricted distribution of this species will limit the receptive zone to northern Queensland where this species occurs. Importantly, the role in ZIKV transmission of Culex and other Aedes spp. tested will be negligible. Despite being the implicated vector, the relatively high ID50 and need for a high titer disseminated infection in Ae. aegypti suggest that high mosquito population densities will be required to facilitate epidemic ZIKV transmission among the currently immunologically naïve human population in Australia.

  9. Niche tracking and rapid establishment of distributional equilibrium in the house sparrow show potential responsiveness of species to climate change.

    Directory of Open Access Journals (Sweden)

    William B Monahan

    Full Text Available The ability of species to respond to novel future climates is determined in part by their physiological capacity to tolerate climate change and the degree to which they have reached and continue to maintain distributional equilibrium with the environment. While broad-scale correlative climatic measurements of a species' niche are often described as estimating the fundamental niche, it is unclear how well these occupied portions actually approximate the fundamental niche per se, versus the fundamental niche that exists in environmental space, and what fitness values bounding the niche are necessary to maintain distributional equilibrium. Here, we investigate these questions by comparing physiological and correlative estimates of the thermal niche in the introduced North American house sparrow (Passer domesticus. Our results indicate that occupied portions of the fundamental niche derived from temperature correlations closely approximate the centroid of the existing fundamental niche calculated on a fitness threshold of 50% population mortality. Using these niche measures, a 75-year time series analysis (1930-2004 further shows that: (i existing fundamental and occupied niche centroids did not undergo directional change, (ii interannual changes in the two niche centroids were correlated, (iii temperatures in North America moved through niche space in a net centripetal fashion, and consequently, (iv most areas throughout the range of the house sparrow tracked the existing fundamental niche centroid with respect to at least one temperature gradient. Following introduction to a new continent, the house sparrow rapidly tracked its thermal niche and established continent-wide distributional equilibrium with respect to major temperature gradients. These dynamics were mediated in large part by the species' broad thermal physiological tolerances, high dispersal potential, competitive advantage in human-dominated landscapes, and climatically induced

  10. Potential profiles in the central core of the cathode in the star mode operation in an inertial-electrostatic fusion neutron source

    International Nuclear Information System (INIS)

    Yoshikawa, K.; Masuda, K.; Toku, H.

    2003-01-01

    After the successful measurements of the localized electric fields in the center-spot mode operation with relatively large space-charge effects by the laser-induced fluorescence (LIF) method, measurements of potential profiles in the star mode operation with small space-charge effects on helium gas are made in the central cathode core region of an Inertial-Electrostatic Confinement Fusion (IECF) neutron source, which is most suitable to neutron calibration in the fusion devices. Since the high-voltage is required to the star mode operation on deuterium gas, it is predicted to bring about very small beam space charge-related potential. To increase accuracy, we adopted n=4 (2 1 S to 4 1 D:HeI) transition, instead of previous n=3, which is most sensitive to the local electric fields in the Stark transition, and verified using the well-known U-shaped hollow cathode potential. The localized electric fields thus measured by LIF method using n=4 transition show negligible electric fields in the star mode compared with the center-spot mode. (author)

  11. Potential effects of climate change on geographic distribution of the Tertiary relict tree species Davidia involucrata in China

    Science.gov (United States)

    Tang, Cindy Q.; Dong, Yi-Fei; Herrando-Moraira, Sonia; Matsui, Tetsuya; Ohashi, Haruka; He, Long-Yuan; Nakao, Katsuhiro; Tanaka, Nobuyuki; Tomita, Mizuki; Li, Xiao-Shuang; Yan, Hai-Zhong; Peng, Ming-Chun; Hu, Jun; Yang, Ruo-Han; Li, Wang-Jun; Yan, Kai; Hou, Xiuli; Zhang, Zhi-Ying; López-Pujol, Jordi

    2017-01-01

    This study, using species distribution modeling (involving a new approach that allows for uncertainty), predicts the distribution of climatically suitable areas prevailing during the mid-Holocene, the Last Glacial Maximum (LGM), and at present, and estimates the potential formation of new habitats in 2070 of the endangered and rare Tertiary relict tree Davidia involucrata Baill. The results regarding the mid-Holocene and the LGM demonstrate that south-central and southwestern China have been long-term stable refugia, and that the current distribution is limited to the prehistoric refugia. Given future distribution under six possible climate scenarios, only some parts of the current range of D. involucrata in the mid-high mountains of south-central and southwestern China would be maintained, while some shift west into higher mountains would occur. Our results show that the predicted suitable area offering high probability (0.5‒1) accounts for an average of only 29.2% among the models predicted for the future (2070), making D. involucrata highly vulnerable. We assess and propose priority protected areas in light of climate change. The information provided will also be relevant in planning conservation of other paleoendemic species having ecological traits and distribution ranges comparable to those of D. involucrata. PMID:28272437

  12. Molecular characterization of black Aspergillus species from onion and their potential for ochratoxin A and fumonisin B2 production.

    Science.gov (United States)

    Gherbawy, Youssuf; Elhariry, Hesham; Kocsubé, Sándor; Bahobial, Abdulaziz; Deeb, Bahig El; Altalhi, Abdulla; Varga, János; Vágvölgyi, Csaba

    2015-05-01

    Onion bulbs can become contaminated with various molds during the storage period, the most important causal agents being black aspergilli (Aspergillus section Nigri). Taxonomic studies have revealed that this group of Aspergillus contains many species that cannot be reliably identified using standard morphological methods. Therefore, it is necessary to define the fungus causing this problem in the onion exactly, especially since some species assigned to section Nigri are well known as ochratoxin and/or fumonisin producers. Sixty fungal isolates belonging to 10 fungal genera were isolated from 40 onion samples originated from the Taif region in Saudi Arabia. Black aspergilli were detected in 37 onion samples. Using primer pairs (awaspec and Cmd6) designed based on partial calmodulin gene sequence data, 37 isolates were identified as A. welwitschiae. The ochratoxin A and fumonisin B2 contents of the onion samples were examined. No ochratoxins were detected in the collected samples, while fumonisin B2 was detected in 37.5% of the onion samples. Eighteen of 37 isolates of Aspergillus welwitschiae were recognized as potential producers for fumonisin B2. Multiplex polymerase chain reactions designed to detect biosynthetic genes of fumonisins confirmed these results.

  13. Assessment and comparison of probiotic potential of four Lactobacillus species isolated from feces samples of Iranian infants.

    Science.gov (United States)

    Halimi, Shahnaz; Mirsalehian, Akbar

    2016-02-01

    The probiotic potential of Lactobacillus species isolated from infant feces was investigated. For this study, the antibiotic susceptibility, tolerance in gut-related conditions, antimicrobial activity, and ability to adhere to a human colorectal adenocarcinoma cell line (Caco-2 cells) of four common Lactobacillus species (Lactobacillus paracasei [n = 15], Lactobacillus rhamnosus [n = 45], Lactobacillus gasseri [n = 20] and Lactobacillus fermentum [n = 18]) were assessed. Most isolates that which were sensitive to imipenem, ampicillin, gentamycin, erythromycin and tetracycline were selected for other tests. L. gasseri isolates had the greatest sensitivity to gastric and intestinal fluids (viability). L. fermentum (FH5, FH13 and FH18) had the highest adhesion to Caco-2 cells. The lowest antibacterial activity against pathogenic bacteria was shown by L. gasseri strains in spot tests. Furthermore, non-adjusted cell-free culture supernatants with low pH had greater antimicrobial activity, which was related to organic acid. The results showed that some isolates of L. rhamnosus and L. fermentum are suitable for use as a probiotic. © 2015 The Societies and John Wiley & Sons Australia, Ltd.

  14. Total antioxidant potential of resinous exudates from Heliotropium species, and a comparison of the ABTS and DPPH methods.

    Science.gov (United States)

    Lissi, E A; Modak, B; Torres, R; Escobar, J; Urzua, A

    1999-06-01

    Total reactive antioxidant potential (TRAP) of resinous exudates from Heliotropium species was evaluated by measuring the bleaching of stable free radicals. The antioxidant capacity of the resinous exudates in Trolox equivalents, evaluated from the bleaching of ABTS derived radical cations, ranged from 2.0 M (H. huascoense) to 5.2 M (H. stenophyllum), indicating a very high concentration of phenolic compounds. Considerably smaller values were obtained by measuring the bleaching of DPPH radicals. The ratio between the values obtained employing ABTS derived radicals and DPPH, ranged from 37 (H. megalanthum) to 4.5 (H. chenopodiaceum variety typica). The magnitude of the difference can be considered as an indication of the relative reactivity of the antioxidants present in the exudates. Similar ratios were observed when stoichiometric coefficients were evaluated for representative purified flavonoids obtained from the resinous exudates.

  15. A potential new proxy for paleo-atmospheric pO2 from soil carbonate-hosted fluid inclusions applied to pristine Chinle soils from the Petrified Forest 1A core

    Science.gov (United States)

    Schaller, M. F.; Pettitt, E.; Knobbe, T.

    2017-12-01

    Proxies for the concentration of O2 in the ancient atmosphere are scarce. We have developed a potential new proxy for ancient atmospheric O2 content based on soil carbonate-hosted fluid inclusions. Soils are in continuous atmospheric communication, and relatively static equilibration between soil gas and atmospheric gas during formation, such that a predictable amount of atmosphere infiltrates a soil. This atmosphere is trapped by inclusions during carbonate precipitation. Here we show that carbonate hosted fluid inclusions are faithful recorders of soil gas concentrations and isotope ratios, and specifically that soil O2 partial pressures can be derived from the total gas contents of these inclusions. Using carbonate nodules from a span of depths in a modern vertisol near Dallas, TX, as a test case, we employ an online crushing technique to liberate gases from soil carbonates into a small custom-built quadrupole mass spectrometer where all gases are measured in real time. We quantify the total oxygen content of the gas using a matrix-matched calibration, and define each species as a partial pressure of the total gas released from the nodule. Atmospheric pO2 is very simply derived from the soil-nodule partial pressures by accounting for the static productivity of the soil (using a small correction based on the CO2 concentration). When corrected for aqueous solubility using Henry's Law, these soil-carbonate hosted gas results reveal soil O2 concentrations that are comparable to modern-day dry atmosphere. Armed with this achievement in modern soils, and as a test on the applicability of the approach to ancient samples, we successfully apply the new proxy to nodules from the Late Triassic Chinle formation from the Petrified Forest National Park Core, taken as part of the Colorado Plateau Coring Project. Analysis of soil O2 from soil gas monitoring wells paired with measurements from contemporaneous soil carbonate nodules is needed to precisely calibrate the new proxy.

  16. On the identity of the adventive species of Eufriesea Cockerell in the USA: systematics and potential distribution of the coerulescens species group (Hymenoptera, Apidae

    Directory of Open Access Journals (Sweden)

    Victor H. Gonzalez

    2017-04-01

    Full Text Available In the summer of 2010, two male specimens of the neotropical orchid bee genus Eufriesea Cockerell were collected in the Guadalupe Mountains of western Texas and southeastern New Mexico, USA. We tentatively identified them as E. coerulescens (Lepeletier de Saint Fargeau because of the uncertainty surrounding the limits of this taxon and hypothesized that they were members of a persistent bee population, rather than long-distance transient vagrants. The goals of this paper are to clarify the identity of these specimens, assess the species limits of E. coerulescens, and to evaluate suitability of habitats in the USA for this adventive species. Herein, we revise the species in the coerulescens group using morphological features of both sexes and confirm that the specimens of Eufriesea from the USA are E. coerulescens. We recognize the following six species in the coerulescens group: E. coerulescens, E. micheneri Ayala & Engel, E. simillima (Moure & Michener, which is reinstated from synonym with E. coerulescens, and three new species from Mexico (E. barthelli Gonzalez & Griswold, sp. n., E. engeli Gonzalez & Griswold, sp. n., and E. oliveri Gonzalez & Griswold, sp. n.. To facilitate the identification of these taxa, we present a fully illustrated account of the species, comparative diagnoses, descriptions, and an updated key to all Mexican species of Eufriesea. Our analyses using species distribution modelling show an absence of suitable habitat for E. coerulescens in western Texas and southeastern New Mexico, thus favoring the long-distance dispersal hypothesis. The analyses also suggest high suitability of habitats across the Caribbean and some areas in Florida, as well as in other regions in Mexico and Central America. We discuss the implications of these results and compare them with the predicted distribution available for the other two known adventive orchid bee species in the USA.

  17. Potential role of frugivorous birds (Passeriformes) on seed dispersal of six plant species in a restinga habitat, southeastern Brazil.

    Science.gov (United States)

    Gomes, Verônica Souza da Mota; Correia, Maria Célia Rodrigues; de Lima, Heloisa Alves; Alves, Maria Alice S

    2008-03-01

    Restingas are considered stressful habitats associated with the Brazilian Atlantic forest, and their ecological interactions are poorly known. The goal of the present study was to determine the potential role of frugivorous birds as seed dispersers in a restinga habitat. Data were collected in Parque Nacional da Restinga de Jurubatiba, southeastern Brazil, where the main physiognomy (Open Clusia Formation) is characterized by the presence of patches of vegetation covering 20 to 48 % of the sandy soil and reaching a height of 5 m. Birds were captured with mist nets (12 x 2.5 m; 36 mm mesh; 1,680 net-hrs) and had their fecal and regurgitate samples inspected for seeds. Six plant species found in these bird samples were studied. The germination of seeds obtained from plants was compared to those from the birds. Both groups of seeds were set on Petri dishes at room temperature and washed when infected with fungi. In general, there was no effect on germination rate, and the effect on germination speed was negative. Germination of seeds from Pilosocereus arrabidae treated by the birds seemed to be influenced by storage of defecated seeds, while few Miconia cinnamomifolia seeds both from plants and from birds germinated. Ocotea notata presented a great variation in time to the onset of germination, perhaps an advantage against dissecation. Aechmea nudicaulis, Clusia hilariana and Erythroxylum subsessile probably take advantage of the arrival to favorable microhabitats, not by the gut effect on the seeds. All plant species studied are numerically important for the community and some of them are main actors in the succession of vegetation patches. Among the birds, Mimus gilvus is an important resident species, endemic to restingas in Brazil, while Turdus amaurochalinus is a visitor and may be important for plants that fructify during its passage by the study site. Although the effect of pulp removal was only tested for one species (Achmea nudicaulis) in the present study

  18. Inflation targeting and core inflation

    OpenAIRE

    Julie Smith

    2005-01-01

    This paper examines the interaction of core inflation and inflation targeting as a monetary policy regime. Interest in core inflation has grown because of inflation targeting. Core inflation is defined in numerous ways giving rise to many potential measures; this paper defines core inflation as the best forecaster of inflation. A cross-country study finds before the start of inflation targeting, but not after, core inflation differs between non-inflation targeters and inflation targeters. Thr...

  19. Potential NH{sub 4}{sup +} and NO{sub 3}{sup -} uptake on various Sphagnum species

    Energy Technology Data Exchange (ETDEWEB)

    Jauhiainen, J [Joensuu Univ. (Finland). Dept. of Biology; Wallen, B; Malmer, N [Lund Univ. (Sweden). Dept. of Plant Ecology

    1997-12-31

    The objective of this research is to test differences in NH{sub 4}{sup +} and NO{sub 3}{sup -} uptake on various Sphagnum species under laboratory conditions. The studied species represent two gradients: the minerotrophy-ombrotrophy (mire margin - mire expanse) gradient, and the hummock-hollow gradient. There are distinct differences in the uptake rate between various Sphagnum species and these differences seem to be due to both structural and environmental factors: (1) on individual basis the highest uptake rate is in species with large capitulum and high number of ion exchange sites i.e. lawn species, (2) on dry mass basis the most effective species are the hummock species though they have a low DM, (3) from the ecosystem point of view, hummock species with high number of shoots per unit area and high uptake rate on dry mass basis, are the most effective species in filtering available nitrogen. (1 ref.)

  20. Potential NH{sub 4}{sup +} and NO{sub 3}{sup -} uptake on various Sphagnum species

    Energy Technology Data Exchange (ETDEWEB)

    Jauhiainen, J. [Joensuu Univ. (Finland). Dept. of Biology; Wallen, B.; Malmer, N. [Lund Univ. (Sweden). Dept. of Plant Ecology

    1996-12-31

    The objective of this research is to test differences in NH{sub 4}{sup +} and NO{sub 3}{sup -} uptake on various Sphagnum species under laboratory conditions. The studied species represent two gradients: the minerotrophy-ombrotrophy (mire margin - mire expanse) gradient, and the hummock-hollow gradient. There are distinct differences in the uptake rate between various Sphagnum species and these differences seem to be due to both structural and environmental factors: (1) on individual basis the highest uptake rate is in species with large capitulum and high number of ion exchange sites i.e. lawn species, (2) on dry mass basis the most effective species are the hummock species though they have a low DM, (3) from the ecosystem point of view, hummock species with high number of shoots per unit area and high uptake rate on dry mass basis, are the most effective species in filtering available nitrogen. (1 ref.)

  1. Spatial distribution and potential biological risk of some metals in relation to granulometric content in core sediments from Chilika Lake, India.

    Science.gov (United States)

    Barik, Saroja K; Muduli, Pradipta R; Mohanty, Bita; Rath, Prasanta; Samanta, Srikanta

    2018-01-01

    The article presents first systematic report on the concentration of selected major elements [iron (Fe) and manganese (Mn)] and minor elements [zinc (Zn), copper (Cu), chromium (Cr), lead (Pb), nickel (Ni), and cobalt (Co)] from the core sediment of Chilika Lake, India. The analyzed samples revealed higher content of Pb than the background levels in the entire study area. The extent of contamination from minor and major elements is expressed by assessing (i) the metal enrichments in the sediment through the calculations of anthropogenic factor (AF), pollution load index (PLI), Enrichment factor (EF), and geoaccumulation index (Igeo) and (ii) potential biological risks by the use of sediment quality guidelines like effect range median (ERM) and effect range low (ERL) benchmarks. The estimated indices indicated that sediment is enriched with Pb, Ni, Cr, Cu and Co. The enrichment of these elements seems to be due to the fine granulometric characteristics of the sediment with Fe and Mn oxyhydroxides being the main metal carriers and fishing boats using low grade paints, fuel, and fishing technology using lead beads fixed to fishing nets. Trace element input to the Chilika lake needs to be monitored with due emphasis on Cr and Pb contaminations since the ERM and ERL benchmarks indicated potential biological risk with these metals.

  2. Fragmentation patterns in the diatom genus Rouxia and their potential for identifying latent depositional hiatuses in the early Pliocene diatomite of the ANDRILL AND-1B core

    Science.gov (United States)

    Konfirst, M. A.; Scherer, R. P.; Winter, D.; Sjunneskog, C.; Warnock, J.; Kuhn, G.; Niessen, F.; Helling, D.; Magens, D.

    2009-04-01

    Diatom genera have traditionally been split into two primary groupings based upon the symmetry of the siliceous frustule. Diatoms symmetric about a point are classified as centrics, while those symmetric about a line are classified as pennates. This fundamental difference in shape has consequences for preservation in ice proximal settings, where an overriding ice sheet can create shearing in the upper meters of the sediment column. This leads to preferential breakage in pennate forms, and results in a higher ratio of undamaged centric to pennate frustules (Scherer et al., 2004). Similarly, an ice sheet grounded over highly porous diatomite results in significant diatom fragmentation resulting from normal load compaction. The diatom genus Rouxia is a pennate form with a relatively wide raphe, making it particularly susceptible to breakage during ice advance and retreat, and offering the opportunity to evaluate ice advance stages in sedimentary units where glacial erosion may have removed upper depositional units. In the ANDRILL AND-1B core, a long interval of nearly pure diatomite was recovered from 382.98-459.24 mbsf. Construction of an age model during this interval has relied primarily on age ranges provided by presence or absence of key diatom species. However, questions still remain as to the continuity of deposition. In this study, samples were collected at an average of 50-cm spacing for the length of the long diatom unit as well as for 20 meters of the silica-rich diamictite unit directly overlaying the diatomite. Fragments of specimens from the genus Rouxia were counted and classified into categories based on the size of the fragment in relation to total frustule length. These data were then used to develop a quantitative index, which was examined for changes in fragmentation through time. Preliminary data are presented that indicate increased fragmentation at the top of the section under study, which we interpret to indicate evidence for increased glacial

  3. The potential of selected macroalgal species for treatment of AMD at different pH ranges in temperate regions.

    Science.gov (United States)

    Oberholster, Paul J; Cheng, Po-Hsun; Botha, Anna-Maria; Genthe, Bettina

    2014-09-01

    The metal bioaccumulation potential of selected macroalgae species at different pH ranges was study for usage as part of a possible secondary passive acid mine drainage (AMD) treatment technology in algae ponds. Two separate studies were conducted to determine the suitability of macroalgae for passive treatment when metabolic processes in macrophytes and microorganisms in constructed wetlands decrease during winter months. In the field study, the bioconcentration of metals (mg/kg dry weight) measured in the benthic macroalgae mats was in the following order: site 1. Oedogonium crassum Al > Fe > Mn > Zn; site 2. Klebsormidium klebsii, Al > Fe > Mn > Zn; site 3. Microspora tumidula, Fe > Al > Mn > Zn and site 4. M. tumidula, Fe > Mn > Al > Zn. In the laboratory study, cultured macroalgae K. klebsii, O. crassum and M. tumidula isolated from the field sampling sites were exposed to three different pH values (3, 5 and 7), while bioaccumulation of the metals, Al, Fe, Mn and Zn and glutathione S-transferase (GST) activity were measured in the different selected algae species at a constant water temperature of 14 °C. Bioaccumulation of Al was the highest for O. crassum followed by K. klebsii and M. tumidula (p macroalgae O. crassum at all three tested pH values under constant low water temperature. Copyright © 2014 Elsevier Ltd. All rights reserved.

  4. Taraxacum officinale and related species-An ethnopharmacological review and its potential as a commercial medicinal plant.

    Science.gov (United States)

    Martinez, M; Poirrier, P; Chamy, R; Prüfer, D; Schulze-Gronover, C; Jorquera, L; Ruiz, G

    2015-07-01

    Dandelion (Taraxacum spec) is a wild plant that has been used for centuries as a traditional medicine in the relief and treatment of several diseases. This use is due to the presence of sesquiterpenes, saponins, phenolic compounds, flavonoids, and sugars, among others, found in the organs of the plant. The aim of this work is to provide a current review of developments and trends in research on the Taraxacum genus, with a focus on traditional uses and pharmacological properties. This should shed light on the potential of this plant as an attractive commercial herbal medicine. Documents were collected, analyzed, and classified for information regarding medical, agronomic, genetic, and biological aspects of the Taraxacum species. This process was based on a thorough search of documents indexed by scientific search engines. Two important periods of research on Taraxacum have been identified: the first, between 1930 and 1950; and the second, from 1990 to today. During the former, agricultural and genetics research on this plant were, due to the shortage of natural rubber, the focus. In contrast, the main drive in Taraxacum research is now the recovery of bioactives and/or applications in medicine. Pharmacology is the main area in which these plants have been tested, thanks in part to its widely known traditional uses; however, there is less than enthusiastic interest in further human clinical trials. In other areas, Taraxacum sports an enormous list of compounds of industrial interest; and while it is true that only a small amount of these compounds is immediately available in Taraxacum organs and makes it relatively commercially unattractive, only scarce efforts have been made to improve yields. Compounding this issue, most studies of its growth and cultivation have been focused mainly on controlling it as a weed detrimental to certain industrial crops. To wit, in spite of all the research carried out, less than 1% of all the species identified so far (>2500) have

  5. Dynamic role and importance of surrogate species for assessing potential adverse environmental impacts of genetically engineered insect-resistant plants on non-target organisms.

    Science.gov (United States)

    Wach, Michael; Hellmich, Richard L; Layton, Raymond; Romeis, Jörg; Gadaleta, Patricia G

    2016-08-01

    Surrogate species have a long history of use in research and regulatory settings to understand the potentially harmful effects of toxic substances including pesticides. More recently, surrogate species have been used to evaluate the potential effects of proteins contained in genetically engineered insect resistant (GEIR) crops. Species commonly used in GEIR crop testing include beneficial organisms such as honeybees, arthropod predators, and parasitoids. The choice of appropriate surrogates is influenced by scientific factors such as the knowledge of the mode of action and the spectrum of activity as well as societal factors such as protection goals that assign value to certain ecosystem services such as pollination or pest control. The primary reasons for using surrogates include the inability to test all possible organisms, the restrictions on using certain organisms in testing (e.g., rare, threatened, or endangered species), and the ability to achieve greater sensitivity and statistical power by using laboratory testing of certain species. The acceptance of surrogate species data can allow results from one region to be applied or "transported" for use in another region. On the basis of over a decade of using surrogate species to evaluate potential effects of GEIR crops, it appears that the current surrogates have worked well to predict effects of GEIR crops that have been developed (Carstens et al. GM Crops Food 5:1-5, 2014), and it is expected that they should work well to predict effects of future GEIR crops based on similar technologies.

  6. Phase Equilibrium Experiments on Potential Lunar Core Compositions: Extension of Current Knowledge to Multi-Component (Fe-Ni-Si-S-C) Systems

    Science.gov (United States)

    Righter, K.; Pando, K.; Danielson, L.

    2014-01-01

    Numerous geophysical and geochemical studies have suggested the existence of a small metallic lunar core, but the composition of that core is not known. Knowledge of the composition can have a large impact on the thermal evolution of the core, its possible early dynamo creation, and its overall size and fraction of solid and liquid. Thermal models predict that the current temperature at the core-mantle boundary of the Moon is near 1650 K. Re-evaluation of Apollo seismic data has highlighted the need for new data in a broader range of bulk core compositions in the PT range of the lunar core. Geochemical measurements have suggested a more volatile-rich Moon than previously thought. And GRAIL mission data may allow much better constraints on the physical nature of the lunar core. All of these factors have led us to determine new phase equilibria experimental studies in the Fe-Ni-S-C-Si system in the relevant PT range of the lunar core that will help constrain the composition of Moon's core.

  7. HYDRATE CORE DRILLING TESTS

    Energy Technology Data Exchange (ETDEWEB)

    John H. Cohen; Thomas E. Williams; Ali G. Kadaster; Bill V. Liddell

    2002-11-01

    formation comprised of coarse, large-grain sand in ice. Results with this core showed that the viscosity of the drilling fluid must also be carefully controlled. When coarse sand was being cored, the core barrel became stuck because the drilling fluid was not viscous enough to completely remove the large grains of sand. These tests were very valuable to the project by showing the difficulties in coring permafrost or hydrates in a laboratory environment (as opposed to a field environment where drilling costs are much higher and the potential loss of equipment greater). Among the conclusions reached from these simulated hydrate coring tests are the following: Frozen hydrate core samples can be recovered successfully; A spring-finger core catcher works best for catching hydrate cores; Drilling fluid can erode the core and reduces its diameter, making it more difficult to capture the core; Mud must be designed with proper viscosity to lift larger cuttings; and The bottom 6 inches of core may need to be drilled dry to capture the core successfully.

  8. Potential of Combining Optical and Dual Polarimetric SAR Data for Improving Mangrove Species Discrimination Using Rotation Forest

    Directory of Open Access Journals (Sweden)

    Hongsheng Zhang

    2018-03-01

    Full Text Available Classification of mangrove species using satellite images is important for investigating the spatial distribution of mangroves at community and species levels on local, regional and global scales. Hence, studies of mangrove deforestation and reforestation are imperative to support the conservation of mangrove forests. However, accurate discrimination of mangrove species remains challenging due to many factors such as data resolution, species number and spectral confusion between species. In this study, three different combinations of datasets were designed from Worldview-3 and Radarsat-2 data to classify four mangrove species, Kandelia obovate (KO, Avicennia marina (AM, Acanthus ilicifolius (AI and Aegiceras corniculatum (AC. Then, the Rotation Forest (RoF method was employed to classify the four mangrove species. Results indicated the benefits of dual polarimetric SAR data with an improvement of accuracy by 2–3%, which can be useful for more accurate large-scale mapping of mangrove species. Moreover, the difficulty of classifying different mangrove species, in order of increasing difficulty, was identified as KO < AM < AI < AC. Dual polarimetric SAR data are recognized to improve the classification of AI and AC species. Although this improvement is not remarkable, it is consistent for all three methods. The improvement can be particularly important for large-scale mapping of mangrove forest at the species level. These findings also provide useful guidance for future studies using multi-source satellite data for mangrove monitoring and conservation.

  9. Recognition of endophytic Trichoderma species by leaf-cutting ants and their potential in a Trojan-horse management strategy

    Science.gov (United States)

    Rocha, Silma L.; Evans, Harry C.; Jorge, Vanessa L.; Cardoso, Lucimar A. O.; Pereira, Fernanda S. T.; Rocha, Fabiano B.; Barreto, Robert W.; Hart, Adam G.

    2017-01-01

    Interactions between leaf-cutting ants, their fungal symbiont (Leucoagaricus) and the endophytic fungi within the vegetation they carry into their colonies are still poorly understood. If endophytes antagonistic to Leucoagaricus were found in plant material being carried by these ants, then this might indicate a potential mechanism for plants to defend themselves from leaf-cutter attack. In addition, it could offer possibilities for the management of these important Neotropical pests. Here, we show that, for Atta sexdens rubropilosa, there was a significantly greater incidence of Trichoderma species in the vegetation removed from the nests—and deposited around the entrances—than in that being transported into the nests. In a no-choice test, Trichoderma-infested rice was taken into the nest, with deleterious effects on both the fungal gardens and ant survival. The endophytic ability of selected strains of Trichoderma was also confirmed, following their inoculation and subsequent reisolation from seedlings of eucalyptus. These results indicate that endophytic fungi which pose a threat to ant fungal gardens through their antagonistic traits, such as Trichoderma, have the potential to act as bodyguards of their plant hosts and thus might be employed in a Trojan-horse strategy to mitigate the negative impact of leaf-cutting ants in both agriculture and silviculture in the Neotropics. We posit that the ants would detect and evict such ‘malign’ endophytes—artificially inoculated into vulnerable crops—during the quality-control process within the nest, and, moreover, that the foraging ants may then be deterred from further harvesting of ‘Trichoderma-enriched’ plants. PMID:28484603

  10. Cross species association examination of UCN3 and CRHR2 as potential pharmacological targets for antiobesity drugs.

    Directory of Open Access Journals (Sweden)

    Zhihua Jiang

    Full Text Available BACKGROUND: Obesity now constitutes a leading global public health problem. Studies have shown that insulin resistance affiliated with obesity is associated with intramyocellular lipid (IMCL accumulation. Therefore, identification of genes associated with the phenotype would provide a clear target for pharmaceutical intervention and care for the condition. We hypothesized that urocortin 3 (UCN3 and corticotropin-releasing hormone receptor 2 (CRHR2 are associated with IMCL and subcutaneous fat depth (SFD, because the corticotropin-releasing hormone family of peptides are capable of strong anorectic and thermogenic effects. METHODOLOGY/PRINCIPAL FINDINGS: We annotated both bovine UCN3 and CRHR2 genes and identified 12 genetic mutations in the former gene and 5 genetic markers in the promoter region of the latter gene. Genotyping of these 17 markers on Wagyu times Limousin F(2 progeny revealed significant associations between promoter polymorphisms and SFD (P = 0.0203-0.0685 and between missense mutations of exon 2 and IMCL (P = 0.0055-0.0369 in the bovine UCN3 gene. The SFD associated promoter SNPs caused a gain/loss of 12 potential transcription regulatory binding sites, while the IMCL associated coding SNPs affected the secondary structure of UCN3 mRNA. However, none of five polymorphisms in CRHR2 gene clearly co-segregated with either trait in the population (P>0.6000. CONCLUSIONS/SIGNIFICANCE: Because UCN3 is located on human chromosome 10p15.1 where quantitative trait loci for obesity have been reported, our cross species study provides further evidence that it could be proposed as a potential target for developing antiobesity drugs. None of the markers in CRHR2 was associated with obesity-type traits in cattle, which is consistent with findings in human. Therefore, CRHR2 does not lend itself to the development of antiobesity drugs.

  11. Potential role of frugivorous birds (Passeriformes on seed dispersal of six plant species in a restinga habitat, southeastern Brazil

    Directory of Open Access Journals (Sweden)

    Verônica Souza da Mota Gomes

    2008-03-01

    Full Text Available Restingas are considered stressful habitats associated with the Brazilian Atlantic forest, and their ecological interactions are poorly known. The goal of the present study was to determine the potential role of frugivorous birds as seed dispersers in a restinga habitat. Data were collected in Parque Nacional da Restinga de Jurubatiba, southeastern Brazil, where the main physiognomy (Open Clusia Formation is characterized by the presence of patches of vegetation covering 20 to 48 % of the sandy soil and reaching a height of 5 m. Birds were captured with mist nets (12 x 2.5 m; 36 mm mesh; 1 680 net-hrs and had their fecal and regurgitate samples inspected for seeds. Six plant species found in these bird samples were studied. The germination of seeds obtained from plants was compared to those from the birds. Both groups of seeds were set on Petri dishes at room temperature and washed when infected with fungi. In general, there was no effect on germination rate, and the effect on germination speed was negative. Germination of seeds from Pilosocereus arrabidae treated by the birds seemed to be influenced by storage of defecated seeds, while few Miconia cinnamomifolia seeds both from plants and from birds germinated. Ocotea notata presented a great variation in time to the onset of germination, perhaps an advantage against dissecation. Aechmea nudicaulis, Clusia hilariana and Erythroxylum subsessile probably take advantage of the arrival to favorable microhabitats, not by the gut effect on the seeds. All plant species studied are numerically important for the community and some of them are main actors in the succession of vegetation patches. Among the birds, Mimus gilvus is an important resident species, endemic to restingas in Brazil, while Turdus amaurochalinus is a visitor and may be important for plants that fructify during its passage by the study site. Although the effect of pulp removal was only tested for one species (Achmea nudicaulis in the

  12. Assessing the invasive potential of biofuel species proposed for Florida and the United States using the Australian Weed Risk Assessment

    Energy Technology Data Exchange (ETDEWEB)

    Gordon, D.R. [The Nature Conservancy, PO Box 118526, University of Florida, Gainesville, FL 32611 (United States); Department of Biology, PO Box 118526, University of Florida, Gainesville, FL 32611 (United States); Tancig, K.J. [PO Box 116455, University of Florida, Gainesville, FL 32611 (United States); Onderdonk, D.A.; Gantz, C.A. [Department of Biology, PO Box 118526, University of Florida, Gainesville, FL 32611 (United States)

    2011-01-15

    Twelve taxa under exploration as bioenergy crops in Florida and the U.S. were evaluated for potential invasiveness using the Australian Weed Risk Assessment system (WRA) modified for separate assessment at the state and national scales. When tested across a range of geographies, this system correctly identifies invaders 90%, and non-invaders 70% of the time, on average. Predictions for Florida were the same as for the U.S. Arundo donax, Eucalyptus camaldulensis, Eucalyptus grandis, Jatropha curcas, Leucaena leucocephala, Pennisetum purpureum, and Ricinus communis were found to have a high probability of becoming invasive, while Miscanthus x giganteus, Saccharum arundinaceum, Saccharum officinarum, and the sweet variety of Sorghum bicolor have a low probability of becoming invasive. Eucalyptus amplifolia requires further evaluation before a prediction is possible. These results are consistent with reports on other tests of these taxa. Given the economic and ecological impacts of invasive species, including the carbon expended for mechanical and chemical control efforts, cultivation of taxa likely to become invasive should be avoided. (author)

  13. First identification of boronic species as novel potential inhibitors of the Staphylococcus aureus NorA efflux pump.

    Science.gov (United States)

    Fontaine, Fanny; Hequet, Arnaud; Voisin-Chiret, Anne-Sophie; Bouillon, Alexandre; Lesnard, Aurélien; Cresteil, Thierry; Jolivalt, Claude; Rault, Sylvain

    2014-03-27

    Overexpression of efflux pumps is an important mechanism of bacterial resistance that results in the extrusion of antimicrobial agents outside the bacterial cell. Inhibition of such pumps appears to be a promising strategy that could restore the potency of existing antibiotics. The NorA efflux pump of Staphylococcus aureus confers resistance to a wide range of unrelated substrates, such as hydrophilic fluoroquinolones, leading to a multidrug-resistance phenotype. In this work, approximately 150 heterocyclic boronic species were evaluated for their activity against susceptible and resistant strains of S. aureus. Twenty-four hit compounds, although inactive when tested alone, were found to potentiate ciprofloxacin activity by a 4-fold increase at concentrations ranging from 0.5 to 8 μg/mL against S. aureus 1199B, which overexpresses NorA. Boron-free analogues showed no biological activity, thus revealing that the boron atom is crucial for biological activity. This work describes the first reported efflux pump inhibitory activity of boronic acid derivatives.

  14. Potential risk assessment of metals in edible fish species for human consumption from the Eastern Aegean Sea.

    Science.gov (United States)

    Pazi, Idil; Gonul, L Tolga; Kucuksezgin, Filiz; Avaz, Gulsen; Tolun, Leyla; Unluoglu, Aydın; Karaaslan, Yakup; Gucver, S Mine; Koc Orhon, Aybala; Siltu, Esra; Olmez, Gulnur

    2017-07-15

    The levels of Hg, Cd, Pb, Cr, Cu and Zn were measured in the tissues of four edible fish species namely: Diplodus annularis, Pagellus erythrinus, Merluccius merluccius and Mullus barbatus, collected from the Turkish Coast of the Aegean Sea. Except for D. annularis, the levels of Cd and Pb in all fish tissues sampled in Aliaga Bay in 2009 were above the tolerable limits according to the Food and Agriculture Organization of the United Nations (FAO). Hg in P. erythrinus and M. barbatus were higher than the maximum permitted limits (FAO), while D. annularis and M. merluccius were lower than the limit for biota in the district of Aliaga. Although the Target Hazard Quotient (THQ) values for Cd, Pb, Cu, Cr, Zn in all fish samples were lower than 1.0, the THQ for Hg levels were higher than 1.0 for most of the samples. According to the THQ values, M. merluccius may be consumed in moderation from Aliaga Bay, while the consumption of M. barbatus and P. erythrinus collected from Aliaga Bay are potentially hazardous to human health due to the Hg concentrations. Fish collected from Izmir Bay can be consumed safely. Copyright © 2017 Elsevier Ltd. All rights reserved.

  15. In silico serine β-lactamases analysis reveals a huge potential resistome in environmental and pathogenic species.

    Science.gov (United States)

    Brandt, Christian; Braun, Sascha D; Stein, Claudia; Slickers, Peter; Ehricht, Ralf; Pletz, Mathias W; Makarewicz, Oliwia

    2017-02-24

    The secretion of antimicrobial compounds is an ancient mechanism with clear survival benefits for microbes competing with other microorganisms. Consequently, mechanisms that confer resistance are also ancient and may represent an underestimated reservoir in environmental bacteria. In this context, β-lactamases (BLs) are of great interest due to their long-term presence and diversification in the hospital environment, leading to the emergence of Gram-negative pathogens that are resistant to cephalosporins (extended spectrum BLs = ESBLs) and carbapenems (carbapenemases). In the current study, protein sequence databases were used to analyze BLs, and the results revealed a substantial number of unknown and functionally uncharacterized BLs in a multitude of environmental and pathogenic species. Together, these BLs represent an uncharacterized reservoir of potentially transferable resistance genes. Considering all available data, in silico approaches appear to more adequately reflect a given resistome than analyses of limited datasets. This approach leads to a more precise definition of BL clades and conserved motifs. Moreover, it may support the prediction of new resistance determinants and improve the tailored development of robust molecular diagnostics.

  16. Infection, Reproduction Potential, and Root Galling by Root-knot Nematode Species and Concomitant Populations on Peanut and Tobacco

    Science.gov (United States)

    Hirunsalee, Anan; Barker, K. R.; Beute, M. K.

    1995-01-01

    Single populations of Meloidogyne arenaria races 1 (MA1) and 2 (MA2) and M. hapla (MH), and mixed populations of MA1 + MA2 and MA1 + MH with four inoculum levels of eggs were tested on peanut cv. 'Florigiant' and M. incognita-resistant tobacco cv. 'McNair 373' in a greenhouse experiment. Root infection, female development, and reproduction of MA2 on peanut and MA1 on resistant tobacco were limited at 2 and 6 weeks. MA1, MH, and MA1 + MH on peanut had similar root infection (total parasitic forms per root unit) at both 2 and 6 weeks, and similar female development and reproduction potentials at 6 weeks. MA2 tended to depress root infection, female development, and reproduction of MA1 on peanut. MH had little effect on MA1 on this crop. On tobacco, MA2 population had greater incidence of root infection than did MH at 2 weeks. The two nematode species had similar development in roots at 6 weeks. All of these processes were restricted when either MA2 or MH was present together with MA1. As initial inoculum level of parasitically fit populations increased, relative infection ratio on both peanut and tobacco, and reproduction factor on peanut decreased. Populations that had high infection incidence and reproduction rates induced greater root galling than did other populations. Root galling was suppressed in the presence of antagonistic response between nematode populations. PMID:19277277

  17. Evaluation of 757 Species Under U.S. Endangered Species Act Review on U.S. Department of Defense Lands and their Potential Impact on Army Training

    Science.gov (United States)

    2016-03-15

    Colligyrus n. sp. 2 Masked Duskysnail invertebrate Cordia rupicola Puerto Rico manjack plant Cordulegaster sayi Say’s Spiketail invertebrate Coreopsis...threatened and endangered plants and animals. Balancing threatened and endan- gered species (TES) management with training requirements is an increas...nation’s threatened and endangered plants and animals. A recent lawsuit settled by the U.S. Fish and Wildlife Service (USFWS) requires a review of 757

  18. Core-shell Li2S@Li3PS4 nanoparticles incorporated into graphene aerogel for lithium-sulfur batteries with low potential barrier and overpotential

    Science.gov (United States)

    Jiao, Zheng; Chen, Lu; Si, Jian; Xu, Chuxiong; Jiang, Yong; Zhu, Ying; Yang, Yaqing; Zhao, Bing

    2017-06-01

    Lithium sulfide as a promising cathode material not only have a high theoretical specific capacity, but also can be paired with Li-free anode material to avoid potential safety issues. However, how to prepare high electrochemical performance material is still challenge. Herein, we present a facile way to obtain high crystal quality Li2S nanomaterials with average particle size of about 55 nm and coated with Li3PS4 to form the nano-scaled core-shell Li2S@Li3PS4 composite. Then nano-Li2S@Li3PS4/graphene aerogel is prepared by a simple liquid infiltration-evaporation coating process and used directly as a composite cathode without metal substrate for lithium-sulfur batteries. Electrochemical tests demonstrate that the composite delivers a high discharge capacity of 934.4 mAh g-1 in the initial cycle and retains 485.5 mAh g-1 after 100 cycles at 0.1 C rate. In addition, the composite exhibits much lower potential barrier (∼2.40 V) and overpotential compared with previous reports, indicating that Li2S needs only a little energy to be activated. The excellent electrochemical performances could be attributed to the tiny particle size of Li2S and the superionic conducting Li3PS4 coating layer, which can shorten Li-ion and electron diffusion paths, improve the ionic conductivity, as well as retarding polysulfides dissolution into the electrolyte to some extent.

  19. Comparative evaluation of particle properties, formation of reactive oxygen species and genotoxic potential of tungsten carbide based nanoparticles in vitro

    Energy Technology Data Exchange (ETDEWEB)

    Kuehnel, Dana, E-mail: dana.kuehnel@ufz.de [Department of Bioanalytical Ecotoxicology, Helmholtz-Centre for Environmental Research Leipzig - UFZ, Permoserstr. 15, 04318 Leipzig (Germany); Scheffler, Katja [Department of Bioanalytical Ecotoxicology, Helmholtz-Centre for Environmental Research Leipzig - UFZ, Permoserstr. 15, 04318 Leipzig (Germany); Department of Cell Techniques and Applied Stem Cell Biology, University of Leipzig, Deutscher Platz 5, 04103 Leipzig (Germany); Wellner, Peggy [Department of Bioanalytical Ecotoxicology, Helmholtz-Centre for Environmental Research Leipzig - UFZ, Permoserstr. 15, 04318 Leipzig (Germany); Meissner, Tobias; Potthoff, Annegret [Fraunhofer-Institute for Ceramic Technologies and Systems (IKTS), Winterbergstr. 28, 01277 Dresden (Germany); Busch, Wibke [Department of Bioanalytical Ecotoxicology, Helmholtz-Centre for Environmental Research Leipzig - UFZ, Permoserstr. 15, 04318 Leipzig (Germany); Springer, Armin [Centre for Translational Bone, Cartilage and Soft Tissue Research, University Hospital Carl Gustav Carus, Technical University Dresden, Fetscherstrasse 74, 01307 Dresden (Germany); Schirmer, Kristin [Eawag, Swiss Federal Institute of Aquatic Science and Technology, 8600 Duebendorf (Switzerland); EPF Lausanne, School of Architecture, Civil and Environmental Engineering, 1015 Lausanne (Switzerland); ETH Zuerich, Institute of Biogeochemistry and Pollutant Dynamics, 8092 Zuerich (Switzerland)

    2012-08-15

    Highlights: Black-Right-Pointing-Pointer Assessment of toxic potential of tungsten carbide-based nanoparticles. Black-Right-Pointing-Pointer Evaluation of ROS and micronuclei induction of three hard metal nanomaterials. Black-Right-Pointing-Pointer Dependency of observed toxic effects on the materials physical-chemical properties. Black-Right-Pointing-Pointer Differences in several particle properties seem to modulate the biological response. - Abstract: Tungsten carbide (WC) and cobalt (Co) are constituents of hard metals and are used for the production of extremely hard tools. Previous studies have identified greater cytotoxic potential of WC-based nanoparticles if particles contained Co. The aim of this study was to investigate whether the formation of reactive oxygen species (ROS) and micronuclei would help explain the impact on cultured mammalian cells by three different tungsten-based nanoparticles (WC{sub S}, WC{sub L}, WC{sub L}-Co (S: small; L: large)). The selection of particles allowed us to study the influence of particle properties, e.g. surface area, and the presence of Co on the toxicological results. WC{sub S} and WC{sub L}/WC{sub L}-Co differed in their crystalline structure and surface area, whereas WC{sub S}/WC{sub L} and WC{sub L}-Co differed in their cobalt content. WC{sub L} and WC{sub L}-Co showed neither a genotoxic potential nor ROS induction. Contrary to that, WC{sub S} nanoparticles induced the formation of both ROS and micronuclei. CoCl{sub 2} was tested in relevant concentrations and induced no ROS formation, but increased the rate of micronuclei at concentrations exceeding those present in WC{sub L}-Co. In conclusion, ROS and micronuclei formation could not be associated with the presence of Co in the WC-based particles. The contrasting responses elicited by WC{sub S} vs. WC{sub L} appear to be due to large differences in crystalline structure.

  20. Using Social Media to Measure the Contribution of Red List Species to the Nature-Based Tourism Potential of African Protected Areas.

    Directory of Open Access Journals (Sweden)

    Louise Willemen

    Full Text Available Cultural ecosystem services are defined by people's perception of the environment, which make them hard to quantify systematically. Methods to describe cultural benefits from ecosystems typically include resource-demanding survey techniques, which are not suitable to assess cultural ecosystem services for large areas. In this paper we explore a method to quantify cultural benefits through the enjoyment of natured-based tourism, by assessing the potential tourism attractiveness of species for each protected area in Africa using the IUCN's Red List of Threatened Species. We use the number of pictures of wildlife posted on a photo sharing website as a proxy for charisma, popularity, and ease of observation, as these factors combined are assumed to determine how attractive species are for the global wildlife tourist. Based on photo counts of 2473 African animals and plants, species that seem most attractive to nature-based tourism are the Lion, African Elephant and Leopard. Combining the photo counts with species range data, African protected areas with the highest potential to attract wildlife tourists based on attractive species occurrence were Samburu National Reserve in Kenya, Mukogodo Forest Reserve located just north of Mount Kenya, and Addo Elephant National Park in South-Africa. The proposed method requires only three data sources which are freely accessible and available online, which could make the proposed index tractable for large scale quantitative ecosystem service assessments. The index directly links species presence to the tourism potential of protected areas, making the connection between nature and human benefits explicit, but excludes other important contributing factors for tourism, such as accessibility and safety. This social media based index provides a broad understanding of those species that are popular globally; in many cases these are not the species of highest conservation concern.

  1. Using Social Media to Measure the Contribution of Red List Species to the Nature-Based Tourism Potential of African Protected Areas.

    Science.gov (United States)

    Willemen, Louise; Cottam, Andrew J; Drakou, Evangelia G; Burgess, Neil D

    2015-01-01

    Cultural ecosystem services are defined by people's perception of the environment, which make them hard to quantify systematically. Methods to describe cultural benefits from ecosystems typically include resource-demanding survey techniques, which are not suitable to assess cultural ecosystem services for large areas. In this paper we explore a method to quantify cultural benefits through the enjoyment of natured-based tourism, by assessing the potential tourism attractiveness of species for each protected area in Africa using the IUCN's Red List of Threatened Species. We use the number of pictures of wildlife posted on a photo sharing website as a proxy for charisma, popularity, and ease of observation, as these factors combined are assumed to determine how attractive species are for the global wildlife tourist. Based on photo counts of 2473 African animals and plants, species that seem most attractive to nature-based tourism are the Lion, African Elephant and Leopard. Combining the photo counts with species range data, African protected areas with the highest potential to attract wildlife tourists based on attractive species occurrence were Samburu National Reserve in Kenya, Mukogodo Forest Reserve located just north of Mount Kenya, and Addo Elephant National Park in South-Africa. The proposed method requires only three data sources which are freely accessible and available online, which could make the proposed index tractable for large scale quantitative ecosystem service assessments. The index directly links species presence to the tourism potential of protected areas, making the connection between nature and human benefits explicit, but excludes other important contributing factors for tourism, such as accessibility and safety. This social media based index provides a broad understanding of those species that are popular globally; in many cases these are not the species of highest conservation concern.

  2. Invader Relative Impact Potential: a new metric to understand and predict the ecological impacts of existing, emerging and future invasive alien species

    OpenAIRE

    Dick, JTA; Laverty, C; Lennon, JJ; Barrios-O'Neill, D; Mensink, PJ; Britton, JR; Medoc, V; Boets, P; Alexander, ME; Taylor, NG; Dunn, AM; Hatcher, MJ; Rosewarne, PJ; Crookes, S; MacIsaac, HJ

    2017-01-01

    1. Predictions of the identities and ecological impacts of invasive alien species are critical for risk assessment, but presently we lack universal and standardized metrics that reliably predict the likelihood and degree of impact of such invaders (i.e. measurable changes in populations of affected species). This need is especially pressing for emerging and potential future invaders that have no invasion history. Such a metric would also ideally apply across diverse taxonomic and trophic gro...

  3. Potentialities of line planting technique in rehabilitation of logged over area referred to species diversity, growth and soil quality

    Directory of Open Access Journals (Sweden)

    PRIJANTO PAMOENGKAS

    2010-01-01

    Full Text Available Pamoengkas P (2010 Potentialities of line planting technique in rehabilitation of logged over area referred to species diversity, growth and soil quality. Biodiversitas 11: 34-39. Human interventions in the utilization of tropical forest resources are experiencing unanticipated consequences. The selective logging practices generally cause considerable damage to vegetation and the soil surface. It is supposed that soil condition and vegetation growth rate are deteriorated and reduced. Therefore, scientist strongly argue that the only way to achieve sustainability of Indonesian natural forest will require that the production natural forest is managed through methods that are acceptable from the perspective of environment as well as timber production. This means that there will be a strong need and incentive for methods and innovative technology. For more than two decades, tropical rainforest in Indonesia have been managed intensively under the Indonesian selective cutting (TPI and later on by the Indonesian selective cutting and replanting (TPTI and then, selective cutting and line planting (TPTJ system. TPTJ, as one example of selective cutting, recently become a proper alternative should be taken into consideration in the management of production natural forest in Indonesia by planting dipterocarp species in line. In this system, planting line (width 3 m and intermediate line (width 17 m are made alternately. The initial width of line is 3 m and to be expanded until 10 m within 5 years to introduce more light. The objective of this research was to assess growth and soil quality of TPTJ system. The object of research was TPTJ plot of various ages from 1 year to 7 years. For achieving the objective, 14 sample plots measuring 200 m x 200 m each, were laid out at research plots. The result showed that growth respond of Shorea leprosula toward the width of planting line was better comparing to Shorea parvifolia, but generally from this growth

  4. Potential effects of forestry operations and associated best management practices on riparian wildlife species in the southeastern United States

    Science.gov (United States)

    Brooke M. Warrington; W. Michael Aust; Scott M. Barrett; W. Mark Ford; M. Chad Bolding; Andy Dolloff

    2016-01-01

    The US Fish and Wildlife Service is considering the addition of 374 riparian and aquatic species in the southeastern United States to the federal Threated and Endangered Species List. This recommendation is a result of a 2011 petition, which recognized forest operations as having negative effects on 51 percent of the listed species, citing research conducted in the...

  5. Standardization and optimization of core sampling procedure for carbon isotope analysis in eucalyptus and variation in carbon isotope ratios across species and growth conditions

    CSIR Research Space (South Africa)

    Raju, M

    2011-11-01

    Full Text Available C Aspect grandis urophylla Variation in D13C 16.000 16.500 17.000 17.500 18.000 18.500 19.000 19.500 20.000 20.500 E. camal E urophylla E grandis E pellita E globulus D1 3C Variable N Level of significance Species 2 P<0...

  6. Transformer core

    NARCIS (Netherlands)

    Mehendale, A.; Hagedoorn, Wouter; Lötters, Joost Conrad

    2008-01-01

    A transformer core includes a stack of a plurality of planar core plates of a magnetically permeable material, which plates each consist of a first and a second sub-part that together enclose at least one opening. The sub-parts can be fitted together via contact faces that are located on either side

  7. Transformer core

    NARCIS (Netherlands)

    Mehendale, A.; Hagedoorn, Wouter; Lötters, Joost Conrad

    2010-01-01

    A transformer core includes a stack of a plurality of planar core plates of a magnetically permeable material, which plates each consist of a first and a second sub-part that together enclose at least one opening. The sub-parts can be fitted together via contact faces that are located on either side

  8. Ixodes ricinus ticks are reservoir hosts for Rickettsia helvetica and potentially carry flea-borne Rickettsia species

    Directory of Open Access Journals (Sweden)

    Gaasenbeek Cor

    2009-09-01

    Full Text Available Abstract Background Hard ticks have been identified as important vectors of rickettsiae causing the spotted fever syndrome. Tick-borne rickettsiae are considered to be emerging, but only limited data are available about their presence in Western Europe, their natural life cycle and their reservoir hosts. Ixodes ricinus, the most prevalent tick species, were collected and tested from different vegetation types and from potential reservoir hosts. In one biotope area, the annual and seasonal variability of rickettsiae infections of the different tick stages were determined for 9 years. Results The DNA of the human pathogen R. conorii as well as R. helvetica, R. sp. IRS and R. bellii-like were found. Unexpectedly, the DNA of the highly pathogenic R. typhi and R. prowazekii and 4 other uncharacterized Rickettsia spp. related to the typhus group were also detected in I. ricinus. The presence of R. helvetica in fleas isolated from small rodents supported our hypothesis that cross-infection can occur under natural conditions, since R. typhi/prowazekii and R. helvetica as well as their vectors share rodents as reservoir hosts. In one biotope, the infection rate with R. helvetica was ~66% for 9 years, and was comparable between larvae, nymphs, and adults. Larvae caught by flagging generally have not yet taken a blood meal from a vertebrate host. The simplest explanation for the comparable prevalence of R. helvetica between the defined tick stages is, that R. helvetica is vertically transmitted through the next generation with high efficiency. The DNA of R. helvetica was also present in whole blood from mice, deer and wild boar. Conclusion Besides R. helvetica, unexpected rickettsiae are found in I. ricinus ticks. We propose that I. ricinus is a major reservoir host for R. helvetica, and that vertebrate hosts play important roles in the further geographical dispersion of rickettsiae.

  9. Internal core tightener

    International Nuclear Information System (INIS)

    Brynsvold, G.V.; Snyder, H.J. Jr.

    1976-01-01

    An internal core tightener is disclosed which is a linear actuated (vertical actuation motion) expanding device utilizing a minimum of moving parts to perform the lateral tightening function. The key features are: (1) large contact areas to transmit loads during reactor operation; (2) actuation cam surfaces loaded only during clamping and unclamping operation; (3) separation of the parts and internal operation involved in the holding function from those involved in the actuation function; and (4) preloaded pads with compliant travel at each face of the hexagonal assembly at the two clamping planes to accommodate thermal expansion and irradiation induced swelling. The latter feature enables use of a ''fixed'' outer core boundary, and thus eliminates the uncertainty in gross core dimensions, and potential for rapid core reactivity changes as a result of core dimensional change. 5 claims, 12 drawing figures

  10. Potential establishment of alien-invasive forest insect species in the United States: where and how many?

    Science.gov (United States)

    Frank H. Koch; Denys Yemshanov; Manuel Colunga-Garcia; Roger D. Magarey; William D. Smith

    2011-01-01

    International trade is widely acknowledged as a conduit for movement of invasive species, but few studies have directly quantified the invasion risk confronting individual locations of interest. This study presents estimates of the likelihood of successful entry for alien forest insect species at more than 3,000 urban areas in the contiguous United States (US). To...

  11. Plant species distribution in relation to water-table depth and soil redox potential in montane riparian meadows

    Science.gov (United States)

    Kathleen A. Dwire; J. Boone Kauffman; John E. Baham

    2006-01-01

    The distribution of riparian plant species is largely driven by hydrologic and soil variables, and riparian plant communities frequently occur in relatively distinct zones along streamside elevational and soil textural gradients. In two montane meadows in northeast Oregon, USA, we examined plant species distribution in three riparian plant communities¡ªdefined as wet,...

  12. Time and concentration dependency in the potentially affected fraction of species: the case of hydrogen peroxide treatment of ballast water

    NARCIS (Netherlands)

    Smit, M.G.D.; Ebbens, E.; Jak, R.G.; Huijbregts, M.J.A.

    2008-01-01

    Transport of large volumes of ballast water contributes greatly to invasions of species. Hydrogen peroxide (H2O2) can be used as a disinfectant to prevent the spread of exotic species via ballast water. Instead of using environmental risk assessment techniques for protecting a certain fraction of

  13. On the occurrence of egg masses of the diamond-shaped squid Thysanoteuthis rhombus Troschel, 1857 in the subtropical eastern Atlantic (Canary Islands. A potential commercial species?

    Directory of Open Access Journals (Sweden)

    Alejandro Escanez

    2012-09-01

    Full Text Available Data on opportunistic sightings of diamond-shaped squid Thysanoteuthis rhombus egg masses in the Canary Islands (Atlantic Ocean are presented. A total of 16 egg masses of this species were recorded and photographed from 2000 to 2010 around the western islands of the archipelago (El Hierro, Tenerife and La Gomera. These data reveal the existence of an important spawning area for diamond-shaped squid around the Canary Islands, in subtropical east Atlantic waters. We provide preliminary data for the potential development of an artisanal fishery focused on this species, and a discussion on its potential impacts on the marine ecosystem.

  14. A survey of mosquitoes breeding in used tires in Spain for the detection of imported potential vector species.

    Science.gov (United States)

    Roiz, D; Eritja, R; Escosa, R; Lucientes, J; Marquès, E; Melero-Alcíbar, R; Ruiz, S; Molina, R

    2007-06-01

    The used tire trade has facilitated the introduction, spread, and establishment of the Asian tiger mosquito, Aedes albopictus, and other mosquito species in several countries of America, Africa, Oceania, and Europe. A strategy for detecting these imported mosquito vectors was developed in Spain during 2003-2004 by EVITAR (multidisciplinary network for the study of viruses transmitted by arthropods and rodents). A survey in 45 locations found no invasive species. Eight autochthonous species of mosquitoes were detected in used tires, including Culex pipiens, Cx. hortensis, Cx. modestus, Anopheles atroparvus, An. claviger, Culiseta longiareolata, Cs. annulata, and Aedes caspius. Dominant species were Cx. pipiens and Cs. longiareolata. Aedes caspius was found in only once, near its natural breeding habitat. Considering the recent discovery of an established population of Ae. albopictus in Catalonia, the increasing commerce of used tires in Spain for recycling, storage, and recapping might greatly contribute to the rapid spread of this species across the Iberian Peninsula.

  15. An updated understanding of Texas bumble bee (Hymenoptera: Apidae species presence and potential distributions in Texas, USA

    Directory of Open Access Journals (Sweden)

    Jessica L. Beckham

    2017-08-01

    Full Text Available Texas is the second largest state in the United States of America, and the largest state in the contiguous USA at nearly 700,000 sq. km. Several Texas bumble bee species have shown evidence of declines in portions of their continental ranges, and conservation initiatives targeting these species will be most effective if species distributions are well established. To date, statewide bumble bee distributions for Texas have been inferred primarily from specimen records housed in natural history collections. To improve upon these maps, and help inform conservation decisions, this research aimed to (1 update existing Texas bumble bee presence databases to include recent (2007–2016 data from citizen science repositories and targeted field studies, (2 model statewide species distributions of the most common bumble bee species in Texas using MaxEnt, and (3 identify conservation target areas for the state that are most likely to contain habitat suitable for multiple declining species. The resulting Texas bumble bee database is comprised of 3,580 records, to include previously compiled museum records dating from 1897, recent field survey data, and vetted records from citizen science repositories. These data yielded an updated state species list that includes 11 species, as well as species distribution models (SDMs for the most common Texas bumble bee species, including two that have shown evidence of range-wide declines: B. fraternus (Smith, 1854 and B. pensylvanicus (DeGeer, 1773. Based on analyses of these models, we have identified conservation priority areas within the Texas Cross Timbers, Texas Blackland Prairies, and East Central Texas Plains ecoregions where suitable habitat for both B. fraternus and B. pensylvanicus are highly likely to co-occur.

  16. Irradiation performance of 9--12 Cr ferritic/martensitic stainless steels and their potential for in-core application in LWRs

    International Nuclear Information System (INIS)

    Jones, R.H.; Gelles, D.S.

    1993-08-01

    Ferritic-martensitic stainless steels exhibit radiation stability and stress corrosion resistance that make them attractive replacement materials for austenitic stainless steels for in-core applications. Recent radiation studies have demonstrated that 9% Cr ferritic/martensitic stainless steel had less than a 30C shift in ductile-to-brittle transition temperature (DBTT) following irradiation at 365C to a dose of 14 dpa. These steels also exhibit very low swelling rates, a result of the microstructural stability of these alloys during radiation. The 9 to 12% Cr alloys to also exhibit excellent corrosion and stress corrosion resistance in out-of-core applications. Demonstration of the applicability of ferritic/martensitic stainless steels for in-core LWR application will require verification of the irradiation assisted stress corrosion cracking behavior, measurement of DBTT following irradiation at 288C, and corrosion rates measurements for in-core water chemistry

  17. An estimate of the potential number of mayfly species (Ephemeroptera, Insecta still to be described in Brazil

    Directory of Open Access Journals (Sweden)

    Mylena Neves Cardoso

    2015-07-01

    Full Text Available This study reviewed the data on the Brazilian Ephemeroptera, based on the studies published before July, 2013, estimated the number of species still to be described, and identified which regions of the country have been the subject of least research. More than half the species are known from the description of only one developmental stage, with imagoes being described more frequently than nymphs. The Brazilian Northeast is the region with the weakest database. Body size affected description rates, with a strong tendency for the larger species to be described first. The estimated number of unknown Brazilian species was accentuated by the fact that so few species have been described so far. The steep slope of the asymptote and the considerable confidence interval of the estimate reinforce the conclusion that a large number of species are still to be described. This emphasizes the need for investments in the training of specialists in systematics and ecology for all regions of Brazil to correct these deficiencies, given the role of published papers as a primary source of information, and the fundamental importance of taxonomic knowledge for the development of effective measures for the conservation of ephemeropteran and the aquatic ecosystems they depend on. Keywords: Biodiversity, Prediction of species diversity, Mayflies

  18. Core lifter

    Energy Technology Data Exchange (ETDEWEB)

    Pavlov, N G; Edel' man, Ya A

    1981-02-15

    A core lifter is suggested which contains a housing, core-clamping elements installed in the housing depressions in the form of semirings with projections on the outer surface restricting the rotation of the semirings in the housing depressions. In order to improve the strength and reliability of the core lifter, the semirings have a variable transverse section formed from the outside by the surface of the rotation body of the inner arc of the semiring aroung the rotation axis and from the inner a cylindrical surface which is concentric to the outer arc of the semiring. The core-clamping elements made in this manner have the possibility of freely rotating in the housing depressions under their own weight and from contact with the core sample. These semirings do not have weakened sections, have sufficient strength, are inserted into the limited ring section of the housing of the core lifter without reduction in its through opening and this improve the reliability of the core lifter in operation.

  19. Contaminant Gradients in Trees: Directional Tree Coring Reveals Boundaries of Soil and Soil-Gas Contamination with Potential Applications in Vapor Intrusion Assessment.

    Science.gov (United States)

    Wilson, Jordan L; Samaranayake, V A; Limmer, Matthew A; Schumacher, John G; Burken, Joel G

    2017-12-19

    Contaminated sites pose ecological and human-health risks through exposure to contaminated soil and groundwater. Whereas we can readily locate, monitor, and track contaminants in groundwater, it is harder to perform these tasks in the vadose zone. In this study, tree-core samples were collected at a Superfund site to determine if the sample-collection location around a particular tree could reveal the subsurface location, or direction, of soil and soil-gas contaminant plumes. Contaminant-centroid vectors were calculated from tree-core data to reveal contaminant distributions in directional tree samples at a higher resolution, and vectors were correlated with soil-gas characterization collected using conventional methods. Results clearly demonstrated that directional tree coring around tree trunks can indicate gradients in soil and soil-gas contaminant plumes, and the strength of the correlations were directly proportionate to the magnitude of tree-core concentration gradients (spearman's coefficient of -0.61 and -0.55 in soil and tree-core gradients, respectively). Linear regression indicates agreement between the concentration-centroid vectors is significantly affected by in planta and soil concentration gradients and when concentration centroids in soil are closer to trees. Given the existing link between soil-gas and vapor intrusion, this study also indicates that directional tree coring might be applicable in vapor intrusion assessment.

  20. Potential effects of climate change on the risk of accidents with poisonous species of the genus Tityus (Scorpiones, Buthidae) in Argentina.

    Science.gov (United States)

    Martinez, Pablo Ariel; Andrade, Mayane Alves; Bidau, Claudio Juan

    2018-06-01

    The temporal pattern of co-occurrence of human beings and venomous species (scorpions, spiders, snakes) is changing. Thus, the temporal pattern of areas with risk of accidents with such species tends to become dynamic in time. We analyze the areas of occurrence of species of Tityus in Argentina and assess the impact of global climate change on their area of distribution by the construction of risk maps. Using data of occurrence of the species and climatic variables, we constructed models of species distribution (SMDs) under current and future climatic conditions. We also created maps that allow the detection of temporal shifts in the distribution patterns of each Tityus species. Finally, we developed risk maps for the analyzed species. Our results predict that climate change will have an impact on the distribution of Tityus species which will clearly expand to more southern latitudes, with the exception of T. argentinus. T. bahiensis, widely distributed in Brazil, showed a considerable increase of its potential area (ca. 37%) with future climate change. The species T. confluens and T. trivittatus that cause the highest number of accidents in Argentina are expected to show significant changes of their distributions in future scenarios. The former fact is worrying because Buenos Aires province is the more densely populated district in Argentina thus iable to become the most affected by T. trivittatus. These alterations of distributional patterns can lead to amplify the accident risk zones of venomous species, becoming an important subject of concern for public health policies. Copyright © 2018 Elsevier Ltd. All rights reserved.

  1. Effect of Severe Winter Cold on the Photosynthetic Potentials of Three Co-occurring Evergreen Woody Species in a Mediterranean Forest, Catalonia (Spain)

    Science.gov (United States)

    Sperlich, Dominik; Gracia, Carlos; Peñuelas, Josep; Sabaté, Santi

    2013-04-01

    Evergreen tree species in the Mediterranean region have to cope with a wide range of environmental stress conditions from summer drought to winter cold. The winter period can lead to photoinhibition due to a combination of high solar irradiances and chilling temperatures which can reduce the light saturation point. However, Mediterranean winter mildness can lead periodically to favourable environmental conditions above the threshold for positive carbon balance benefitting evergreen woody species in contrast to winter deciduous species. The advantage of being able to photosynthesis all year round with a significant fraction in the winter month is compensating for the lower photosynthetic potentials during spring and summer in comparison to deciduous species. In this work, we investigated the physiological behaviour of three evergreen tree species (Quercus ilex, Pinus halepensis, Arbutus undeo) co-occurring in a natural and mature Mediterranean forest after a period of mild winter conditions and their response to a sudden period of intense cold weather. Therefore, we examined in each period the photosynthetic potentials by estimating the maximum carboxylation rate (Vcmax) and the maximum electron transport rate (Jmax) through gas exchange measurements. The results indicate that all species exhibited extraordinary high photosynthetic potentials during the first period of measurement as a response to the mild conditions. However, the sudden cold period affected negatively the photosynthetic potentials of Quercus ilex and A. unedo with reduction ranging between 37 to 45 %, whereas they were observed to be only insignificantly reduced in Pinus halepensis. Our results can be explained by previous classifications into photoinhibition-avoiding (P. halpensis) and photoinhibition-tolerant (Q. ilex, A. undeo) species on the basis of their susceptibility to dynamic photoinhibition (Martinez Ferri 2000). Photoinhibition tolerant species are characterised with a more dynamic

  2. MODELLING THE POTENTIAL DISTRIBUTION OF TREE SPECIES ON A NATIONAL SCALE IN COLOMBIA: APPLICATION TO PALICOUREA ANGUSTIFOLIA KUNTH AND PALICOUREA GUIANENSIS AUBL.

    Directory of Open Access Journals (Sweden)

    Armenteras Dolors

    2010-12-01

    Full Text Available The results in this study illustrate the methods of using the existing species' presentrecords and environmental data to produce a niche-based model based on Mahalanobis distances, and also to predict the distribution of a number of tree species in order to apply it on a national scale to a tropical country such as Colombia. The technique applied is based on the Mahalanobis distance, a generalised squared distance statistic. We used environmental data integrated into a GIS, and a georeferenced collection of localities of Palicourea angustifolia and Palicourea guianensis to produce and test the predictive models. We used record data for Warszewiczia coccinea to validate the model. The two Palicourea species show largely complementary potential ranges. P. angustifolia shows a clear Andean distribution with a presence in lower and upper mountain areas but not in the highlands or in the inter-Andean valleys. P. guianensis was predicted throughout most of the lowland areas of Colombia including lowland Amazonian forests, and most of the tropical savannas of Orinoquia. The model predicted an overlapping distribution of the two species of 93.9 km2. The Mahalanobian approach contributes to the development of biogeographically oriented modelling that makes the best use of the available data in data-scarce regions (such as most of the tropics. The technique provides key information about the environmental niche of the species being modelled, and allows comparisons between the species. The prediction achieved for the two species was considered satisfactory.

  3. Potential Use of Essential oils from Four Tunisian Species of Lamiaceae: Biological Alternative for Fungal and Weed Control

    OpenAIRE

    Mohsen Hanana; Manel Ben Mansour; Methaq Algabr; Ismail Amri; Samia Gargouri; Abderrahmane Romane; Bassem Jamoussi; Lamia Hamrouni

    2017-01-01

    The chemical composition of the essential oils (EOs) of four Lamiaceae (Thymus capitatus Hoff. et Link. , Rosmarinus officinalis L., Origanum vulgare L. and Mentha pulegium L.) growing wild in Tunisia was analyzed by gas chromatography (GC) and gas chromatography-mass spectrometry (GC-MS). Obtained results showed significant variations among the different species. The major constituents identified for each species were respectively carvacrol (69%) and δ-terpinene (17%) for T. capitatus, 1,8-c...

  4. The potential of Vachellia kosiensis (Acacia kosiensis) as a dryland forestry species in terms of its water use, growth rates and resultant water-use efficiency

    CSIR Research Space (South Africa)

    Gush, Mark B

    2017-01-01

    Full Text Available , their correspondingly low water-use rates indicated that the indigenous trees had similar biophysical water-use efficiency values compared with genetically improved introduced tree species and highlighted their potential as an attractive land-use option in appropriate...

  5. Reactor core

    International Nuclear Information System (INIS)

    Azekura, Kazuo; Kurihara, Kunitoshi.

    1992-01-01

    In a BWR type reactor, a great number of pipes (spectral shift pipes) are disposed in the reactor core. Moderators having a small moderating cross section (heavy water) are circulated in the spectral shift pipes to suppress the excess reactivity while increasing the conversion ratio at an initial stage of the operation cycle. After the intermediate stage of the operation cycle in which the reactor core reactivity is lowered, reactivity is increased by circulating moderators having a great moderating cross section (light water) to extend the taken up burnup degree. Further, neutron absorbers such as boron are mixed to the moderator in the spectral shift pipe to control the concentration thereof. With such a constitution, control rods and driving mechanisms are no more necessary, to simplify the structure of the reactor core. This can increase the fuel conversion ratio and control great excess reactivity. Accordingly, a nuclear reactor core of high conversion and high burnup degree can be attained. (I.N.)

  6. Ice Cores

    Data.gov (United States)

    National Oceanic and Atmospheric Administration, Department of Commerce — Records of past temperature, precipitation, atmospheric trace gases, and other aspects of climate and environment derived from ice cores drilled on glaciers and ice...

  7. Potential effects of sea-level rise on plant productivity: Species-specific responses in northeast Pacific tidal marshes

    Science.gov (United States)

    Janousek, Christopher; Buffington, Kevin J.; Thorne, Karen M.; Guntenspergen, Glenn R.; Takekawa, John Y.; Dugger, Bruce D.

    2016-01-01

    Coastal wetland plants are adapted to varying degrees of inundation. However, functional relationships between inundation and productivity are poorly characterized for most species. Determining species-specific tolerances to inundation is necessary to evaluate sea-level rise (SLR) effects on future marsh plant community composition, quantify organic matter inputs to marsh accretion, and inform predictive modeling of tidal wetland persistence. In 2 macrotidal estuaries in the northeast Pacific we grew 5 common species in experimental mesocosms across a gradient of tidal elevations to assess effects on growth. We also tested whether species abundance distributions along elevation gradients in adjacent marshes matched productivity profiles in the mesocosms. We found parabolic relationships between inundation and total plant biomass and shoot counts in Spartina foliosa and Bolboschoenus maritimus in California, USA, and in Carex lyngbyei in Oregon, USA, with maximum total plant biomass occurring at 38, 28, and 15% time submerged, respectively. However, biomass of Salicornia pacifica and Juncus balticus declined monotonically with increasing inundation. Inundation effects on the ratio of belowground to aboveground biomass varied inconsistently among species. In comparisons of field distributions with mesocosm results, B. maritimus, C. lyngbyei and J. balticus were abundant in marshes at or above elevations corresponding with their maximum productivity; however, S. foliosa and S. pacifica were frequently abundant at lower elevations corresponding with sub-optimal productivity. Our findings show species-level differences in how marsh plant growth may respond to future SLR and highlight the sensitivity of high marsh species such as S. pacifica and J. balticus to increases in flooding.

  8. Searching for native tree species and respective potential biomarkers for future assessment of pollution effects on the highly diverse Atlantic Forest in SE-Brazil

    International Nuclear Information System (INIS)

    Domingos, Marisa; Bulbovas, Patricia; Camargo, Carla Z.S.; Aguiar-Silva, Cristiane; Brandão, Solange E.; Dafré-Martinelli, Marcelle; Dias, Ana Paula L.; Engela, Marcela R.G.S.; Gagliano, Janayne; Moura, Barbara B.; Alves, Edenise S.; Rinaldi, Mirian C.S.; Gomes, Eduardo P.C.; Furlan, Claudia M.; Figueiredo, Ana Maria G.

    2015-01-01

    This study summarizes the first effort to search for bioindicator tree species and respective potential biomarkers for future assessment of potential mixed pollution effects on the highly diverse Atlantic Forest in SE-Brazil. Leaves of the three most abundant species inventoried in a phytosociological survey (Croton floribundus, Piptadenia gonoacantha and Astronium graveolens) were collected in four forest remnants during winter and summer (2012). Their potential bioindicator attributes were highlighted using a screening of morphological, chemical and biochemical markers. The leaf surface structure and/or epicuticular wax composition pointed the accumulator properties of C. floribundus and P. gonoacantha. C. floribundus is a candidate for assessing potential accumulation of Cu, Cd, Mn, Ni, S and Zn. P. gonoacantha is a candidate to monitor polycyclic aromatic hydrocarbons. Increased levels of secondary metabolites and decreased antioxidant capacity in leaves of A. graveolens may support its value as a bioindicator for oxidative pollutants by visible dark stipplings. - Highlights: • We searched for tree species from Atlantic Forest for future air pollution monitoring in Brazil. • Croton floribundus, Astronium graveolens and Piptadenia gonoacantha were possible bioindicators. • P. gonoachanta was a potential bioindicator of polycyclic aromatic hydrocarbons. • C. floribundus was a potential bioindicator of heavy metals and sulfur. • A. graveolens may be used for monitoring oxidative pollutants, due to its biochemical leaf traits. - Inherent characteristics of the most abundant native tree species were potential biomarkers for assessing pollution effects on the highly diverse Atlantic Forest in SE-Brazil

  9. Culicoides Species Communities Associated with Wild Ruminant Ecosystems in Spain: Tracking the Way to Determine Potential Bridge Vectors for Arboviruses.

    Directory of Open Access Journals (Sweden)

    Sandra Talavera

    Full Text Available The genus Culicoides Latreille 1809 is a well-known vector for protozoa, filarial worms and, above all, numerous viruses. The Bluetongue virus (BTV and the recently emerged Schmallenberg virus (SBV are responsible for important infectious, non-contagious, insect-borne viral diseases found in domestic ruminants and transmitted by Culicoides spp. Both of these diseases have been detected in wild ruminants, but their role as reservoirs during the vector-free season still remains relatively unknown. In fact, we tend to ignore the possibility of wild ruminants acting as a source of disease (BTV, SBV and permitting its reintroduction to domestic ruminants during the following vector season. In this context, a knowledge of the composition of the Culicoides species communities that inhabit areas where there are wild ruminants is of major importance as the presence of a vector species is a prerequisite for disease transmission. In this study, samplings were conducted in areas inhabited by different wild ruminant species; samples were taken in both 2009 and 2010, on a monthly basis, during the peak season for midge activity (in summer and autumn. A total of 102,693 specimens of 40 different species of the genus Culicoides were trapped; these included major BTV and SBV vector species. The most abundant vector species were C. imicola and species of the Obsoletus group, which represented 15% and 11% of total numbers of specimens, respectively. At the local scale, the presence of major BTV and SBV vector species in areas with wild ruminants coincided with that of the nearest sentinel farms included in the Spanish Bluetongue Entomological Surveillance Programme, although their relative abundance varied. The data suggest that such species do not exhibit strong host specificity towards either domestic or wild ruminants and that they could consequently play a prominent role as bridge vectors for different pathogens between both types of ruminants. This finding

  10. Species C Rotaviruses in Children with Diarrhea in India, 2010-2013: A Potentially Neglected Cause of Acute Gastroenteritis.

    Science.gov (United States)

    Bhat, Sudipta; Kattoor, Jobin Jose; Malik, Yashpal Singh; Sircar, Shubhankar; Deol, Pallavi; Rawat, Vinita; Rakholia, Ritu; Ghosh, Souvik; Vlasova, Anastasia N; Nadia, Touil; Dhama, Kuldeep; Kobayashi, Nobumichi

    2018-02-17

    All over the world, children and adults are severely affected by acute gastroenteritis, caused by one of the emerging enteric pathogens, rotavirus C (RVC). At present, no extensive surveillance program is running for RVC in India, and its prevalence is largely unknown except cases of local outbreaks. Here, we intended to detect the presence of RVC in diarrheic children visiting or admitted to hospitals in Haldwani (state of Uttarakhand, India), a city located in the foothills of the Himalayas. During 2010-2013, we screened 119 samples for RVC by an RVC VP6 gene-specific RT-PCR. Of these, 38 (31.93%) were found positive, which is higher than the incidence rates reported so far from India. The phylogenetic analysis of the derived nucleotide sequences from one of the human RVC (HuRVC) isolates, designated as HuRVC/H28/2013/India, showed that the study isolate belongs to genotype I2, P2 and E2 for RVC structural genes 6 and 4 (VP6, and VP4) and non-structural gene 4 (NSP4), respectively. Furthermore, the VP6 gene of HuRVC/H28/2013/India shows the highest similarity to a recently-reported human-like porcine RVC (PoRVC/ASM140/2013/India, KT932963) from India suggesting zoonotic transmission. We also report a full-length NSP4 gene sequence of human RVC from India. Under the One-health platforms there is a need to launch combined human and animal RVC surveillance programs for a better understanding of the epidemiology of RVC infections and for implementing control strategies. Reoviridae , possess 11 double-stranded segments of RNA that encode six structural viral proteins (VP1, VP2, VP3, VP4, VP6, VP7) and five/six non-structural proteins (NSP1-NSP5/6) [7]. Based on the antigenic properties of the major inner capsid protein (VP6), RVs are subdivided into eight well-characterized species (A-H) and two putative species viz. I and J [8-10]. Humans and other mammalian species are affected by species A, B, C and H rotaviruses and birds by species D, F and G, and species E has

  11. Role of Culex and Anopheles mosquito species as potential vectors of rift valley fever virus in Sudan outbreak, 2007

    Directory of Open Access Journals (Sweden)

    Galal Fatma H

    2010-03-01

    Full Text Available Abstract Background Rift Valley fever (RVF is an acute febrile arthropod-borne viral disease of man and animals caused by a member of the Phlebovirus genus, one of the five genera in the family Bunyaviridae. RVF virus (RVFV is transmitted between animals and human by mosquitoes, particularly those belonging to the Culex, Anopheles and Aedes genera. Methods Experiments were designed during RVF outbreak, 2007 in Sudan to provide an answer about many raised questions about the estimated role of vector in RVFV epidemiology. During this study, adult and immature mosquito species were collected from Khartoum and White Nile states, identified and species abundance was calculated. All samples were frozen individually for further virus detection. Total RNA was extracted from individual insects and RVF virus was detected from Culex, Anopheles and Aedes species using RT-PCR. In addition, data were collected about human cases up to November 24th, 2007 to asses the situation of the disease in affected states. Furthermore, a historical background of the RVF outbreaks was discussed in relation to global climatic anomalies and incriminated vector species. Results A total of 978 mosquitoes, belonging to 3 genera and 7 species, were collected during Sudan outbreak, 2007. Anopheles gambiae arabiensis was the most frequent species (80.7% in White Nile state. Meanwhile, Cx. pipiens complex was the most abundant species (91.2% in Khartoum state. RT-PCR was used and successfully amplified 551 bp within the M segment of the tripartite negative-sense single stranded RNA genome of RVFV. The virus was detected in female, male and larval stages of Culex and Anopheles species. The most affected human age interval was 15-29 years old followed by ≥ 45 years old, 30-44 years old, and then 5-14 years old. Regarding to the profession, housewives followed by farmers, students, shepherd, workers and the free were more vulnerable to the infection. Furthermore, connection between

  12. Methanol Extracts of 28 Hieracium Species from the Balkan Peninsula - Comparative LC-MS Analysis, Chemosystematic Evaluation of their Flavonoid and Phenolic Acid Profiles and Antioxidant Potentials.

    Science.gov (United States)

    Milutinović, Violeta; Niketić, Marjan; Ušjak, Ljuboš; Nikolić, Dejan; Krunić, Aleksej; Zidorn, Christian; Petrović, Silvana

    2018-01-01

    Hieracium s. str. represents one of the largest and most complex genera of flowering plants. As molecular genetics seems unlikely to disentangle intricate relationships within this reticulate species complex, analysis of flavonoids and phenolic acids, known as good chemosystematic markers, promise to be more reliable. Data about pharmacological activity of Hieracium species are scarce. Evaluation of the chemosystematic significance of flavonoids and phenolic acids of methanol extracts of aerial flowering parts of 28 Hieracium species from the Balkans. Additionally, investigation of antioxidant potentials of the extracts. Comparative qualitative and quantitative analysis of flavonoids and phenolic acids was performed by LC-MS. Multivariate statistical data analysis included non-metric multidimensional scaling (nMDS), unweighted pair-group arithmetic averages (UPGMA) and principal component analysis (PCA). Antioxidant activity was evaluated using three colorimetric tests. Dominant phenolics in almost all species were luteolin type flavonoids, followed by phenolic acids. Although the investigated Hieracium species share many compounds, the current classification of the genus was supported by nMDS and UPGMA analyses with a good resolution to the group level. Hieracium naegelianum was clearly separated from the other investigated species. Spatial and ecological distances of the samples were likely to influence unexpected differentiation of some groups within H. sect. Pannosa. The vast majority of dominant compounds significantly contributed to differences between taxa. The antioxidant potential of the extracts was satisfactory and in accordance with their phenolics composition. Comparative LC-MS analysis demonstrated that flavonoids and phenolic acids are good indicators of chemosystematic relationships within Hieracium, particularly between non-hybrid species and groups from the same location. Copyright © 2017 John Wiley & Sons, Ltd. Copyright © 2017 John Wiley

  13. Comparative phylogeography of two related plant species with overlapping ranges in Europe, and the potential effects of climate change on their intraspecific genetic diversity

    Directory of Open Access Journals (Sweden)

    Provan Jim

    2011-01-01

    Full Text Available Abstract Background The aim of the present study was to use a combined phylogeographic and species distribution modelling approach to compare the glacial histories of two plant species with overlapping distributions, Orthilia secunda (one-sided wintergreen and Monotropa hypopitys (yellow bird's nest. Phylogeographic analysis was carried out to determine the distribution of genetic variation across the range of each species and to test whether both correspond to the "classic" model of high diversity in the south, with decreasing diversity at higher latitudes, or whether the cold-adapted O. secunda might retain more genetic variation in northern populations. In addition, projected species distributions based on a future climate scenario were modelled to assess how changes in the species ranges might impact on total intraspecific diversity in both cases. Results Palaeodistribution modelling and phylogeographic analysis using multiple genetic markers (chloroplast trnS-trnG region, nuclear ITS and microsatellites for O. secunda; chloroplast rps2, nuclear ITS and microsatellites for M. hypopitys indicated that both species persisted throughout the Last Glacial Maximum in southern refugia. For both species, the majority of the genetic diversity was concentrated in these southerly populations, whereas those in recolonized areas generally exhibited lower levels of diversity, particularly in M. hypopitys. Species distribution modelling based on projected future climate indicated substantial changes in the ranges of both species, with a loss of southern and central populations, and a potential northward expansion for the temperate M. hypopitys. Conclusions Both Orthilia secunda and Monotropa hypopitys appear to have persisted through the LGM in Europe in southern refugia. The boreal O. secunda, however, has retained a larger proportion of its genetic diversity in more northerly populations outside these refugial areas than the temperate M. hypopitys. Given

  14. Present and future potential habitat distribution of Carcharhinus falciformis and Canthidermis maculata by-catch species in the tropical tuna purse-seine fishery under climate change

    Directory of Open Access Journals (Sweden)

    Nerea eLezama Ochoa

    2016-03-01

    Full Text Available By-catch species from tropical tuna purse seine fishery have been affected by fishery pressures since the last century; however, the habitat distribution and the climate change impacts on these species are poorly known. With the objective of predicting the potential suitable habitat for a shark (Carcharhinus falciformis and a teleost (Canthidermis maculata in the Indian, Atlantic and Eastern Pacific Oceans, a MaxEnt species distribution model (SDM was developed using data collected by observers in tuna purse seiners. The relative percentage of contribution of some environmental variables (depth, sea surface temperature, salinity and primary production and the potential impact of climate change on species habitat by the end of the century under the A2 scenario (scenario with average concentrations of carbon dioxide of 856 ppm by 2100 were also evaluated. Results showed that by-catch species can be correctly modelled using observed occurrence records and few environmental variables with SDM. Results from projected maps showed that the equatorial band and some coastal upwelling regions were the most suitable areas for both by-catch species in the three oceans in concordance with the main fishing grounds. Sea surface temperature was the most important environmental variable which contributed to explain the habitat distribution of the two species in the three oceans in general. Under climate change scenarios, the largest change in present habitat suitability is observed in the Atlantic Ocean (around 16% of the present habitat suitability area of Carcharhinus falciformis and Canthidermis maculata, respectively whereas the change is less in the Pacific (around 10% and 8% and Indian Oceans (around 3% and 2 %. In some regions such as Somalia, the Atlantic equatorial band or Peru’s coastal upwelling areas, these species could lose potential habitat whereas in the south of the equator in the Indian Ocean, the Benguela System and in the Pacific coast of

  15. Using fitness parameters to evaluate three oilseed Brassicaceae species as potential oil crops in two contrasting environments

    Science.gov (United States)

    Thlaspi arvense and Camelina sativa have gained considerable attention as biofuel crops. But in some areas, these species, including C. microcarpa, are becoming rare weeds because of agriculture intensification. Including them as crops could guarantee their conservation in agricultural systems. The ...

  16. Phylogenetic and chemical studies in the potential psychotropic species complex of Psilocybe atrobrunnea with taxonomic and nomenclatural notes

    NARCIS (Netherlands)

    Borovička, J.; Oborník, M.; Stříbrný, J.; Noordeloos, M.E.; Parra Sánchez, L.A.; Gryndler, M.

    2015-01-01

    Five Psilocybe species with unresolved systematic position (P. atrobrunnea, P. laetissima, P. medullosa, P. pelliculosa, and P. silvatica) were investigated using four molecular markers (EF1-α, ITS, LSU, and IGS). Phylogenetic analysis revealed that with the exception of P. laetissima, which is now

  17. A cross sectional study on Dutch layer farms to investigate the prevalence and potential risk factors for different Chlamydia species.

    NARCIS (Netherlands)

    Heijne, Marloes; van der Goot, Jeanet A; Fijten, Helmi; van der Giessen, Joke W; Kuijt, Eric; Maassen, Catharina B M; van Roon, Annika; Wit, Ben; Koets, Ad P; Roest, Hendrik I J

    2018-01-01

    In poultry several Chlamydia species have been detected, but Chlamydia psittaci and Chlamydia gallinacea appear to be most prevalent and important. Chlamydia psittaci is a well-known zoonosis and is considered to be a pathogen of poultry. Chlamydia gallinacea has been described more recently. Its

  18. A cross sectional study on Dutch layer farms to investigate the prevalence and potential risk factors for different Chlamydia species

    NARCIS (Netherlands)

    Heijne, Marloes; Goot, van der Jeanet A.; Fijten, Helmi; Giessen, van der Joke W.; Kuijt, Eric; Maassen, Catharina B.M.; Roon, van Annika; Wit, Ben; Koets, Ad P.; Roest, Hendrik I.J.

    2018-01-01

    In poultry several Chlamydia species have been detected, but Chlamydia psittaci and Chlamydia gallinacea appear to be most prevalent and important. Chlamydia psittaci is a well-known zoonosis and is considered to be a pathogen of poultry. Chlamydia gallinacea has been described more recently. Its

  19. DNA barcoding implicates 23 species and four orders as potential pollinators of Chinese knotweed (Persicaria chinensis) in Peninsular Malaysia.

    Science.gov (United States)

    Wong, M-M; Lim, C-L; Wilson, J-J

    2015-08-01

    Chinese knotweed (Persicaria chinensis) is of ecological and economic importance as a high-risk invasive species and a traditional medicinal herb. However, the insects associated with P. chinensis pollination have received scant attention. As a widespread invasive plant we would expect P. chinensis to be associated with a diverse group of insect pollinators, but lack of taxonomic identification capacity is an impediment to confirm this expectation. In the present study we aimed to elucidate the insect pollinators of P. chinensis in peninsular Malaysia using DNA barcoding. Forty flower visitors, representing the range of morphological diversity observed, were captured at flowers at Ulu Kali, Pahang, Malaysia. Using Automated Barcode Gap Discovery, 17 morphospecies were assigned to 23 species representing at least ten families and four orders. Using the DNA barcode library (BOLD) 30% of the species could be assigned a species name, and 70% could be assigned a genus name. The insects visiting P. chinensis were broadly similar to those previously reported as visiting Persicaria japonica, including honey bees (Apis), droneflies (Eristalis), blowflies (Lucilia) and potter wasps (Eumedes), but also included thrips and ants.

  20. Broadcast seeding as a potential tool to reestablish native species in degraded dry forest ecosystems in Hawaii

    Science.gov (United States)

    S. Brooks; S. Cordell; L. Perry

    2009-01-01

    Hawaiian dry forests currently occupy a small fraction of their former range, and worldwide tropical dry forests are one of the most human-altered systems. Many small-scale projects have been successful in restoring native dry forests in abandoned pastures and degraded woodlands by outplanting after invasive species removal, but this is a costly approach. In this...

  1. Cladophialophora psammophila, a novel species of Chaetothyriales with a potential use in the bioremediation of volatile aromatic hydrocarbons

    NARCIS (Netherlands)

    Badali, H.; Prenafata - Boldu, F.X.; Guarro, J.; Klaasen, C.; Meis, J.F.; de Hoog, G.S.

    2011-01-01

    Cladophialophora is a genus of asexual black yeast-like fungi with one-celled, hydrophobic conidia which is predicted to have teleomorphs in the ascomycete genus Capronia, a member of the order Chaetothyriales. Cladophialophora species are relatively frequently involved in human disease ranging from

  2. Potential species distribution and richness of ixodidae ticks associated with wild vertebrates from Michoacán, Mexico

    NARCIS (Netherlands)

    Vargas-Sandoval, Margarita; Priego-Santander, Angel G.; Larrazabal de la Via, Alejandra Patricia; Sosa-Gutiérrez, Carolina G.; Lara-Chávez, Blanca; Avila-Val, Teresita

    2014-01-01

    Ticks are regarded as the most relevant vectors of disease-causing pathogens in domestic and wild animals. The diversity of Ixodidae is known for a very small number of genera. Ixodes are repre- sented by 26 species, and in 2007 the first reported ticks vectors in Mexico for the causal agent of Lyme

  3. The environmental requirements of Crunoecia irrorata (Curtis, 1834 (Trichoptera: Lepidostomatidae and the potential of the species for use as an indicator: an example from the Vistulian glaciation area

    Directory of Open Access Journals (Sweden)

    Anna Rychła

    2014-02-01

    Full Text Available The caddisfly Crunoecia irrorata is a wide-spread species in Europe and inhabits permanent spring areas with pristine or moderately disturbed habitat conditions. However, the pattern of its distribution on the national scale as well as detailed preferences toward water properties are still insufficiently known. To complete this knowledge we analysed at first the distribution of this species in Poland which showed that its extent involves the whole territory, however, with sparse occurrence in most regions and with large areas where the species has not been observed yet. The data compilation also showed that the species’ frequency of occurrence is highest in the central-western region of Poland. Furthermore, its frequency of occurrence decreased towards the east and the northeast. Because the highest frequency of occurrence of this species was found in central-western Poland, the spring sites in this region were used as a model area for the analysis of the hydrochemical conditions associated with the species (25 parameters. The results of the study showed that C. irrorata strongly prefers habitats with low nitrate (NO3 and chloride (Cl concentrations. In detail, a regression model showed that the probability of occurrence of C. irrorata was only 5 % at concentrations of 32 mg L-1 NO3 and 35 mg L-1 Cl. In contrast, high concentrations of heavy metals (zinc, lead, cooper, chromium, and cadmium as well as of total iron and manganese did not significantly influence the presence of this species. In conclusion, environmental assessments relating to human health and landscape health can use C. irrorata as an indicator species for biogenic and salt pollution, but the species is not a potential indicator of heavy metals in spring water. Therefore, information on the presence of C. irrorata can serve to preserve crenic ecosystems and their assemblages and can be used to prevent anthropogenic contamination of these ecosystems.

  4. MRI-derived measurements of fibrous-cap and lipid-core thickness: the potential for identifying vulnerable carotid plaques in vivo

    International Nuclear Information System (INIS)

    Trivedi, Rikin A.; U-King-Im, Jean-Marie; Graves, Martin J.; Horsley, Jo; Goddard, Martin; Kirkpatrick, Peter J.; Gillard, Jonathan H.

    2004-01-01

    Vulnerable plaques have thin fibrous caps overlying large necrotic lipid cores. Recent studies have shown that high-resolution MR imaging can identify these components. We set out to determine whether in vivo high-resolution MRI could quantify this aspect of the vulnerable plaque. Forty consecutive patients scheduled for carotid endarterectomy underwent pre-operative in vivo multi-sequence MR imaging of the carotid artery. Individual plaque constituents were characterised on MR images. Fibrous-cap and lipid-core thickness was measured on MRI and histology images. Bland-Altman plots were generated to determine the level of agreement between the two methods. Multi-sequence MRI identified 133 corresponding MR and histology slices. Plaque calcification or haemorrhage was seen in 47 of these slices. MR and histology derived fibrous cap-lipid-core thickness ratios showed strong agreement with a mean difference between MR and histology ratios of 0.02 (±0.04). The intra-class correlation coefficient between two readers for measurements was 0.87 (95% confidence interval, 0.73 and 0.93). Multi-sequence, high-resolution MR imaging accurately quantified the relative thickness of fibrous-cap and lipid-core components of carotid atheromatous plaques. This may prove to be a useful tool to characterise vulnerable plaques in vivo. (orig.)

  5. MRI-derived measurements of fibrous-cap and lipid-core thickness: the potential for identifying vulnerable carotid plaques in vivo

    Energy Technology Data Exchange (ETDEWEB)

    Trivedi, Rikin A. [Addenbrooke' s Hospital, University Department of Radiology, Cambridge (United Kingdom); Addenbrooke' s Hospital, Academic Department of Neurosurgery, Cambridge (United Kingdom); U-King-Im, Jean-Marie; Graves, Martin J. [Addenbrooke' s Hospital, University Department of Radiology, Cambridge (United Kingdom); Horsley, Jo; Goddard, Martin [Papworth Hospital, Department of Histopathology, Papworth Everard (United Kingdom); Kirkpatrick, Peter J. [Addenbrooke' s Hospital, Academic Department of Neurosurgery, Cambridge (United Kingdom); Gillard, Jonathan H. [Addenbrooke' s Hospital, University Department of Radiology, Cambridge (United Kingdom); Addenbrooke' s Hospital, Hills Road, Box 219, Cambridge (United Kingdom)

    2004-09-01

    Vulnerable plaques have thin fibrous caps overlying large necrotic lipid cores. Recent studies have shown that high-resolution MR imaging can identify these components. We set out to determine whether in vivo high-resolution MRI could quantify this aspect of the vulnerable plaque. Forty consecutive patients scheduled for carotid endarterectomy underwent pre-operative in vivo multi-sequence MR imaging of the carotid artery. Individual plaque constituents were characterised on MR images. Fibrous-cap and lipid-core thickness was measured on MRI and histology images. Bland-Altman plots were generated to determine the level of agreement between the two methods. Multi-sequence MRI identified 133 corresponding MR and histology slices. Plaque calcification or haemorrhage was seen in 47 of these slices. MR and histology derived fibrous cap-lipid-core thickness ratios showed strong agreement with a mean difference between MR and histology ratios of 0.02 ({+-}0.04). The intra-class correlation coefficient between two readers for measurements was 0.87 (95% confidence interval, 0.73 and 0.93). Multi-sequence, high-resolution MR imaging accurately quantified the relative thickness of fibrous-cap and lipid-core components of carotid atheromatous plaques. This may prove to be a useful tool to characterise vulnerable plaques in vivo. (orig.)

  6. Seroprevalence of Trypanosoma cruzi Among Eleven Potential Reservoir Species from Six States Across the Southern United States

    Science.gov (United States)

    Brown, Emily L.; Roellig, Dawn M.; Gompper, Matthew E.; Monello, Ryan J.; Wenning, Krista M.; Gabriel, Mourad W.

    2010-01-01

    Abstract Trypanosoma cruzi, the causative agent of Chagas' disease, is a substantial public health concern in Latin America. Although rare in humans and domestic animals in the United States, T. cruzi is commonly detected in some wildlife species, most commonly raccoons (Procyon lotor) and Virginia opossums (Didelphis virginiana). To increase our understanding of the reservoir host species range and geographic distribution, 11 species of mammals from six states spanning the known range of T. cruzi (Arizona, California, Florida, Georgia, Missouri, and Virginia) were tested for antibodies to T. cruzi using indirect immunofluorescent antibody testing. In addition, culture isolation attempts were conducted on a limited number of animals from Georgia and Florida. Evidence of T. cruzi was found in every state except California; however, low numbers of known reservoirs were tested in California. In general, the highest seroprevalence rates were found in raccoons (0–68%) and opossums (17–52%), but antibodies to T. cruzi were also detected in small numbers of striped skunks (Mephitis mephitis) from Arizona and Georgia, bobcats (Lynx rufus) from Georgia, two coyotes (Canis latrans) from Georgia and Virginia, and a ringtail (Bassariscus astutus) from Arizona. Culture-based prevalence rates for raccoons were significantly greater than those for opossums; however, seroprevalences of raccoons and opossums from several geographic locations in Georgia and Florida were not different, indicating that exposure rates of these two species are similar within these areas. For both raccoons and opossums, seroprevalence was significantly higher in females than in males. No difference was detected in seroprevalence between adults and juveniles and between animals caught in urban and rural locations. Our results indicate that T. cruzi prevalence varies by host species, host characteristics, and geographic region and provides data to guide future studies on the natural history of T. cruzi

  7. Dissociation in effects of lesions of the nucleus accumbens core and shell on appetitive pavlovian approach behavior and the potentiation of conditioned reinforcement and locomotor activity by D-amphetamine.

    Science.gov (United States)

    Parkinson, J A; Olmstead, M C; Burns, L H; Robbins, T W; Everitt, B J

    1999-03-15

    Dopamine release within the nucleus accumbens (NAcc) has been associated with both the rewarding and locomotor-stimulant effects of abused drugs. The functions of the NAcc core and shell were investigated in mediating amphetamine-potentiated conditioned reinforcement and locomotion. Rats were initially trained to associate a neutral stimulus (Pavlovian CS) with food reinforcement (US). After excitotoxic lesions that selectively destroyed either the NAcc core or shell, animals underwent additional CS-US training sessions and then were tested for the acquisition of a new instrumental response that produced the CS acting as a conditioned reinforcer (CR). Animals were infused intra-NAcc with D-amphetamine (0, 1, 3, 10, or 20 microg) before each session. Shell