Asymmetry of prompt photon production in polarized pp collisions at RHIC

International Nuclear Information System (INIS)

Skoro, G.P.; Zupan, M.; Tokarev, M.V.

1999-01-01

The prompt photon production in polarized pp collision at high energies is studied. The double-spin asymmetry A LL of the process of calculated by using the Monte Carlo code SPHINX. A possibility to discriminate the spin-dependent gluon distributions and to determine the sign of ΔG id discussed. A detailed study of the expected background, such as π 0 production and decay, is given. Predictions for the longitudinal asymmetry A LL of the prompt photons and π 0 -meson production in the polarized pp collisions at RHIC energies have been made

Production and polarization of the Λc+ and the charm of the proton

International Nuclear Information System (INIS)

Anjos, J. dos; Magnin, J.; Simao, F.R.A.; Herrera, G.

1997-02-01

We propose a two component model involving the parton fusion mechanism and recombination of the ud valence diquark with a sea c-quark of the incident proton to describe Λ c + inclusive production in pp collisions. We also study the polarization of the produced Λ c + in the framework of the Thomas Precession Model for polarization. We show that a measurement of the Λ c polarization is a sensitive test of its production mechanism. In particular the intrinsic charm model predicts a positive polarization for the Λ c within the framework of the Thomas Precession Model, while according to the model presented here the Λ c polarization should be negative. The measurement of the Λ c polarization provides a close examination of intrinsic charm Fock states in the proton and give interesting information about the hadroproduction of charm. (author)

Asymmetry of prompt photon production in polarized pp collisions at RHIC

Energy Technology Data Exchange (ETDEWEB)

Skoro, G.P.; Zupan, M. [Institute of Nuclear Science ' Vinca' , Faculty of Physics University of Belgrade, (Yugoslavia); Tokarev, M.V. [Laboratory of High Energies, Joint Institute of Nuclear Research Dubna, Moscow Region (Russian Federation)

1999-08-01

The prompt photon production in polarized pp collision at high energies is studied. The double-spin asymmetry A{sub LL} of the process of calculated by using the Monte Carlo code Sphinx. A possibility to discriminate the spin-dependent gluon distributions and to determine the sign of {delta}G is discussed. A detailed study of the expected background, such as {pi}{sup 0} production and decay, is given. Predictions for the longitudinal asymmetry A{sub LL} of the prompt photons and {pi}{sup 0}-meson production in the polarized pp collisions at RHIC energies have been made.

Anthropogenic antibiotic resistance genes mobilization to the polar regions.

Science.gov (United States)

Hernández, Jorge; González-Acuña, Daniel

2016-01-01

Anthropogenic influences in the southern polar region have been rare, but lately microorganisms associated with humans have reached Antarctica, possibly from military bases, fishing boats, scientific expeditions, and/or ship-borne tourism. Studies of seawater in areas of human intervention and proximal to fresh penguin feces revealed the presence of Escherichia coli strains least resistant to antibiotics in penguins, whereas E. coli from seawater elsewhere showed resistance to one or more of the following antibiotics: ampicillin, tetracycline, streptomycin, and trim-sulfa. In seawater samples, bacteria were found carrying extended-spectrum β-lactamase (ESBL)-type CTX-M genes in which multilocus sequencing typing (MLST) showed different sequence types (STs), previously reported in humans. In the Arctic, on the contrary, people have been present for a long time, and the presence of antibiotic resistance genes (ARGs) appears to be much more wide-spread than was previously reported. Studies of E coli from Arctic birds (Bering Strait) revealed reduced susceptibility to antibiotics, but one globally spreading clone of E. coli genotype O25b-ST131, carrying genes of ESBL-type CTX-M, was identified. In the few years between sample collections in the same area, differences in resistance pattern were observed, with E. coli from birds showing resistance to a maximum of five different antibiotics. Presence of resistance-type ESBLs (TEM, SHV, and CTX-M) in E. coli and Klebsiella pneumoniae was also confirmed by specified PCR methods. MLST revealed that those bacteria carried STs that connect them to previously described strains in humans. In conclusion, bacteria previously related to humans could be found in relatively pristine environments, and presently human-associated, antibiotic-resistant bacteria have reached a high global level of distribution that they are now found even in the polar regions.

Production of linear polarization by segmentation of helical undulator

International Nuclear Information System (INIS)

Tanaka, T.; Kitamura, H.

2002-01-01

A simple scheme to obtain linearly polarized radiation (LPR) with a segmented undulator is proposed. The undulator is composed of several segments each of which forms a helical undulator and has helicity opposite to those of adjacent segments. Due to coherent sum of radiation, the circularly polarized component is canceled out resulting in production of LPR without any higher harmonics. The radiation from the proposed device is investigated analytically, which shows that a high degree of linear polarization is obtained in spite of a finite beam emittance and angular acceptance of optics, if a sufficiently large number of segments and an adequate photon energy are chosen. Results of calculation to investigate practical performances of the proposed device are presented

On measurement of photon polarization by triplet production differential cross sections

International Nuclear Information System (INIS)

Vinokurov, E.A.; Boldyshev, V.F.

1984-01-01

Dependence of triplet production by linearly polarized photon (the recoil electron momenta being p 1 >=p 10 ) upon the electron pair invariant mass Δ (in the ranges of 0.1 mc 10 2 2 ) is studied aiming to analyze possible use of triplet photoproduction to measure polarization of high-energy photon beams. It is shown that the regions 2m 2 and 2m 200 mc 2 are optimum and provide a 17-35% accuracy improvement for the photon beam polarization measurement, the number of events decreasing by a factor of 2.4-4.4

A Kinome RNAi Screen in Drosophila Identifies Novel Genes Interacting with Lgl, aPKC, and Crb Cell Polarity Genes in Epithelial Tissues.

Science.gov (United States)

Parsons, Linda M; Grzeschik, Nicola A; Amaratunga, Kasun; Burke, Peter; Quinn, Leonie M; Richardson, Helena E

2017-08-07

In both Drosophila melanogaster and mammalian systems, epithelial structure and underlying cell polarity are essential for proper tissue morphogenesis and organ growth. Cell polarity interfaces with multiple cellular processes that are regulated by the phosphorylation status of large protein networks. To gain insight into the molecular mechanisms that coordinate cell polarity with tissue growth, we screened a boutique collection of RNAi stocks targeting the kinome for their capacity to modify Drosophila "cell polarity" eye and wing phenotypes. Initially, we identified kinase or phosphatase genes whose depletion modified adult eye phenotypes associated with the manipulation of cell polarity complexes (via overexpression of Crb or aPKC). We next conducted a secondary screen to test whether these cell polarity modifiers altered tissue overgrowth associated with depletion of Lgl in the wing. These screens identified Hippo, Jun kinase (JNK), and Notch signaling pathways, previously linked to cell polarity regulation of tissue growth. Furthermore, novel pathways not previously connected to cell polarity regulation of tissue growth were identified, including Wingless (Wg/Wnt), Ras, and lipid/Phospho-inositol-3-kinase (PI3K) signaling pathways. Additionally, we demonstrated that the "nutrient sensing" kinases Salt Inducible Kinase 2 and 3 ( SIK2 and 3 ) are potent modifiers of cell polarity phenotypes and regulators of tissue growth. Overall, our screen has revealed novel cell polarity-interacting kinases and phosphatases that affect tissue growth, providing a platform for investigating molecular mechanisms coordinating cell polarity and tissue growth during development. Copyright © 2017 Parsons et al.

Bragg transmission phase plates for the production of circularly polarized x-rays

International Nuclear Information System (INIS)

Lang, J.C.; Srajer, G.

1994-01-01

A thin-crystal Si (400) Bragg transmission x-ray phase plate has been constructed for the production of 5 to 12 keV circularly polarized x-rays. Using multiple beam diffraction from a GaAs crystal, a direct measurement of the degree of circular polarization as a function of off-Bragg position was made. These measurements indicated nearly complete circular polarization (|P c | ≥ 0.95) and full helicity reversal on opposite sides of the rocking curve

Lambda polarization in association K+ -Lambda electro-production

CERN Document Server

Teodorescu, L; Angelescu, T; Baker, O K; Ent, R; Guidal, M; Laget, J M; Mitchell, J; Niculescu, G; Vanderhaeghen, V; William, R

1999-01-01

The result of a feasibility study to measure the Lambda polarization in associated K+ -Lambda electro production is presented. This measurement was performed in the experimental Hall C at Jefferson Lab. The scattered electron was detected in the HMS spectrometer, and the electro-produced kaon and the proton from the Lambda -> ppi- decay were both detected in the SOS spectrometer. This quantity is very sensitive to the elementary p(e,e'K) [capital Lambda, Greek] process and gives information on resonance production, and Regge exchange, among others. The result presented was measured at Q2=1.50 (GeV/c)2 and cos [straight theta, small theta, Greek] K [small gamma, Greek] CM=14 sup o. The limits of the [capital Lambda, Greek] polarization, with respect to the p [small gamma, Greek] x pK axis, were found to be -0.21 and +0.89 with a confidence level of 68%. The result is compared to theoretical predictions based on an effective hadronic field Lagrangian model and a Regge framework model.

Inclusive Λ0 production and polarization in K-p interactions

International Nuclear Information System (INIS)

Haupt, T.

1985-01-01

In this thesis a detailed analysis of inclusive production of neutral strange particles in K - p interactions at 110 GeV/c is presented. The analysis is concentrated on the Λ 0 hyperon production. About 80% of Λ 0 -s is produced in the channel K - p → Λ 0 KK-bar + anything at 110 GeV/c while at lower energies the inclusive Λ 0 production is dominated by the channel K - p → Λ 0 + pions. Next the results of the measurement of the Λ 0 polarization are presented. These results are compared with those obtained at lower energies as well as with those coming from reactions induced by non-strange projectiles. The most striking feature of the polarization is its dependence on the transverse momentum of Λ 0 , different in different channels and different hemispheres. Finally, our results are compared with predictions of models based on the quark-parton picture. 29 refs., 49 figs., 5 tabs. (author)

Transverse single spin asymmetry in Drell-Yan production in polarized pA collisions

NARCIS (Netherlands)

Zhou, J.

2015-01-01

We study the transverse single spin asymmetry in Drell-Yan production in pA collisions with incoming protons being transversely polarized. We carry out the calculation using a newly developed hybrid approach. The polarized cross section computed in the hybrid approach is consistent with that

Spin Transfer in Inclusive Λ0 Production by Transversely Polarized Protons at 200GeV/c

International Nuclear Information System (INIS)

Grosnick, D.P.; Hill, D.A.; Laghai, M.; Lopiano, D.; Ohashi, Y.; Spinka, H.; Stanek, R.W.; Underwood, D.G.; Yokosawa, A.; Bystricky, J.; Lehar, F.; Lesquen, A. de; Rossum, L. van; Cossairt, J.D.; Read, A.L.; Iwatani, K.; Belikov, N.I.; Derevschikov, A.A.; Grachov, O.A.; Matulenko, Y.A.; Meschanin, A.P.; Nurushev, S.B.; Patalakha, D.I.; Rykov, V.L.; Solovyanov, V.L.; Vasiliev, A.N.; Akchurin, N.; Onel, Y.; Maki, T.; Enyo, H.; Funahashi, H.; Goto, Y.; Iijima, T.; Imai, K.; Itow, Y.; Makino, S.; Masaike, A.; Miyake, K.; Nagamine, T.; Saito, N.; Yamashita, S.; Takashima, R.; Takeutchi, F.; Kuroda, K.; Michalowicz, A.; Rappazzo, G.F.; Salvato, G.; Luehring, F.C.; Miller, D.H.; Tamura, N.; Yoshida, T.; Adams, D.L.; Bonner, B.E.; Corcoran, M.D.; Cranshaw, J.; Nessi-Tedaldi, F.; Nessi, M.; Nguyen, C.; Roberts, J.B.; Skeens, J.; White, J.L.; Bravar, A.

1997-01-01

Surprisingly large polarizations in hyperon production by unpolarized protons have been known for a long time. The spin dynamics of the production process can be further investigated with polarized beams. Recently, a negative asymmetry A N was found in inclusive Λ 0 production with a 200GeV/c transversely polarized proton beam. The depolarization D NN in p↑+p→Λ 0 +X has been measured with the same beam over a wide x F range and at moderate p T . D NN reaches positive values of about 30% at high x F and p T ∼1.0GeV/c . This result shows a sizable spin transfer from the incident polarized proton to the outgoing Λ 0 . copyright 1997 The American Physical Society

Soluble immune complexes shift the TLR-induced cytokine production of distinct polarized human macrophage subsets towards IL-10.

Directory of Open Access Journals (Sweden)

Carmen A Ambarus

Full Text Available BACKGROUND: Costimulation of murine macrophages with immune complexes (ICs and TLR ligands leads to alternative activation. Studies on human myeloid cells, however, indicate that ICs induce an increased pro-inflammatory cytokine production. This study aimed to clarify the effect of ICs on the pro- versus anti-inflammatory profile of human polarized macrophages. MATERIALS AND METHODS: Monocytes isolated from peripheral blood of healthy donors were polarized for four days with IFN-γ, IL-4, IL-10, GM-CSF, M-CSF, or LPS, in the presence or absence of heat aggregated gamma-globulins (HAGGs. Phenotypic polarization markers were measured by flow cytometry. Polarized macrophages were stimulated with HAGGs or immobilized IgG alone or in combination with TLR ligands. TNF, IL-6, IL-10, IL-12, and IL-23 were measured by Luminex and/or RT-qPCR. RESULTS: HAGGs did not modulate the phenotypic polarization and the cytokine production of macrophages. However, HAGGs significantly altered the TLR-induced cytokine production of all polarized macrophage subsets, with the exception of MΦ(IL-4. In particular, HAGGs consistently enhanced the TLR-induced IL-10 production in both classically and alternatively polarized macrophages (M1 and M2. The effect of HAGGs on TNF and IL-6 production was less pronounced and depended on the polarization status, while IL-23p19 and IL-12p35 expression was not affected. In contrast with HAGGs, immobilized IgG induced a strong upregulation of not only IL-10, but also TNF and IL-6. CONCLUSION: HAGGs alone do not alter the phenotype and cytokine production of in vitro polarized human macrophages. In combination with TLR-ligands, however, HAGGs but not immobilized IgG shift the cytokine production of distinct macrophage subsets toward IL-10.

Characterization of polarized THP-1 macrophages and polarizing ability of LPS and food compounds.

Science.gov (United States)

Chanput, Wasaporn; Mes, Jurriaan J; Savelkoul, Huub F J; Wichers, Harry J

2013-02-01

Little is known about the polarizing potential of currently used human macrophage cell lines, while a better understanding phenomena can support the prediction of effects in vivo based on in vitro analysis. To test the polarization capability of PMA differentiated-THP-1 macrophages (M0), cells were stimulated with 20 ng ml(-1) IFNγ + 1 μg ml(-1) LPS and 20 ng ml(-1) IL-4, which are known to influence macrophage polarization in vivo and ex vivo into the M1 and M2 state, respectively. Apart from several well-known M1 and M2 markers, also new possible markers for M1 and M2 polarization were analysed in this study. The expression of M1 marker genes was up-regulated in IFNγ + LPS stimulated-M0 THP-1 macrophages. The IL-4 stimulated-M0 THP-1 macrophages expressed M2 cell membrane receptor genes. However, M2 chemokine and their receptor genes were only slightly up-regulated which might be due to the complexity of the secondary cell-cell interaction of the chemokine system. Lipopolysaccharides from E. coli (LPS) and food compounds [lentinan, vitamin D3 (vD3) and the combination of lentinan + vitamin D3 (Len + vD3)] were investigated for their polarizing ability on M0 THP-1 macrophages towards either the M1 or M2 state. LPS (700 ng ml(-1)) was able to skew M0 THP-1 macrophages towards the M1 direction since all analysed M1 marker genes were strongly expressed. Lentinan, vD3 and Len + vD3 did not induce expression of either M1 or M2 markers, indicating no polarizing ability of these compounds. Based on the expression of M1 and M2 marker genes we concluded that THP-1 macrophages could be successfully polarized into either the M1 or M2 state. Therefore, they can be used as a new macrophage polarizing model to estimate the polarizing/switching ability of test food compounds.

An Intelligent Method of Product Scheme Design Based on Product Gene

Directory of Open Access Journals (Sweden)

Qing Song Ai

2013-01-01

Full Text Available Nowadays, in order to have some featured products, many customers tend to buy customized products instead of buying common ones in supermarket. The manufacturing enterprises, with the purpose of improving their competitiveness, are focusing on providing customized products with high quality and low cost as well. At present, how to produce customized products rapidly and cheaply has been the key challenge to manufacturing enterprises. In this paper, an intelligent modeling approach applied to supporting the modeling of customized products is proposed, which may improve the efficiency during the product design process. Specifically, the product gene (PG method, which is an analogy of biological evolution in engineering area, is employed to model products in a new way. Based on product gene, we focus on the intelligent modeling method to generate product schemes rapidly and automatically. The process of our research includes three steps: (1 develop a product gene model for customized products; (2 find the obtainment and storage method for product gene; and (3 propose a specific genetic algorithm used for calculating the solution of customized product and generating new product schemes. Finally, a case study is applied to test the usefulness of our study.

Collisional pumping for the production of intense spin-polarized neutral beams: target considerations. Revision

International Nuclear Information System (INIS)

Stearns, J.W.; Burrell, C.F.; Kaplan, S.N.; Pyle, R.V.; Ruby, L.; Schlachter, A.S.

1985-04-01

Polarized beams at intensity levels heretofore not considered feasible have recently been proposed for heating and fueling fusion plasmas. Polarized-beam fueling could increase fusion rates by 50% as well as allow control of the directionality of the fusion products. A process which we have recently described, and called collisional pumping, promises to produce beams of polarized ions vastly more intense than producible by current methods

Brown and polar bear Y chromosomes reveal extensive male-biased gene flow within brother lineages.

Science.gov (United States)

Bidon, Tobias; Janke, Axel; Fain, Steven R; Eiken, Hans Geir; Hagen, Snorre B; Saarma, Urmas; Hallström, Björn M; Lecomte, Nicolas; Hailer, Frank

2014-06-01

Brown and polar bears have become prominent examples in phylogeography, but previous phylogeographic studies relied largely on maternally inherited mitochondrial DNA (mtDNA) or were geographically restricted. The male-specific Y chromosome, a natural counterpart to mtDNA, has remained underexplored. Although this paternally inherited chromosome is indispensable for comprehensive analyses of phylogeographic patterns, technical difficulties and low variability have hampered its application in most mammals. We developed 13 novel Y-chromosomal sequence and microsatellite markers from the polar bear genome and screened these in a broad geographic sample of 130 brown and polar bears. We also analyzed a 390-kb-long Y-chromosomal scaffold using sequencing data from published male ursine genomes. Y chromosome evidence support the emerging understanding that brown and polar bears started to diverge no later than the Middle Pleistocene. Contrary to mtDNA patterns, we found 1) brown and polar bears to be reciprocally monophyletic sister (or rather brother) lineages, without signals of introgression, 2) male-biased gene flow across continents and on phylogeographic time scales, and 3) male dispersal that links the Alaskan ABC islands population to mainland brown bears. Due to female philopatry, mtDNA provides a highly structured estimate of population differentiation, while male-biased gene flow is a homogenizing force for nuclear genetic variation. Our findings highlight the importance of analyzing both maternally and paternally inherited loci for a comprehensive view of phylogeographic history, and that mtDNA-based phylogeographic studies of many mammals should be reevaluated. Recent advances in sequencing technology render the analysis of Y-chromosomal variation feasible, even in nonmodel organisms. © The Author 2014. Published by Oxford University Press on behalf of the Society for Molecular Biology and Evolution. All rights reserved. For permissions, please e

Polarized electrode enhances biological direct interspecies electron transfer for methane production in upflow anaerobic bioelectrochemical reactor.

Science.gov (United States)

Feng, Qing; Song, Young-Chae; Yoo, Kyuseon; Kuppanan, Nanthakumar; Subudhi, Sanjukta; Lal, Banwari

2018-08-01

The influence of polarized electrodes on the methane production, which depends on the sludge concentration, was investigated in upflow anaerobic bioelectrochemical (UABE) reactor. When the polarized electrode was placed in the bottom zone with a high sludge concentration, the methane production was 5.34 L/L.d, which was 53% higher than upflow anaerobic sludge blanket (UASB) reactor. However, the methane production was reduced to 4.34 L/L.d by placing the electrode in the upper zone of the UABE reactor with lower sludge concentration. In the UABE reactor, the methane production was mainly improved by the enhanced biological direct interspecies electron transfer (bDIET) pathway, and the methane production via the electrode was a minor fraction of less than 4% of total methane production. The polarized electrodes that placed in the bottom zone with a high sludge concentration enhance the bDIET for methane production in the UABE reactor and greatly improve the methane production. Copyright © 2018. Published by Elsevier Ltd.

Undulator-based production of polarized positrons

Energy Technology Data Exchange (ETDEWEB)

Alexander, G. [Tel-Aviv Univ. (Israel); Barley, J. [Cornell Univ., Ithaca, NY (United States); Batygin, Y. [SLAC, Menlo Park, CA (US)] (and others)

2009-05-15

Full exploitation of the physics potential of a future International Linear Collider will require the use of polarized electron and positron beams. Experiment E166 at the Stanford Linear Accelerator Center (SLAC) has demonstrated a scheme in which an electron beam passes through a helical undulator to generate photons (whose first-harmonic spectrum extended to 7.9 MeV) with circular polarization, which are then converted in a thin target to generate longitudinally polarized positrons and electrons. The experiment was carried out with a one-meter-long, 400-period, pulsed helical undulator in the Final Focus Test Beam (FFTB) operated at 46.6 GeV. Measurements of the positron polarization have been performed at five positron energies from 4.5 to 7.5 MeV. In addition, the electron polarization has been determined at 6.7MeV, and the effect of operating the undulator with a ferrofluid was also investigated. To compare the measurements with expectations, detailed simulations were made with an upgraded version of GEANT4 that includes the dominant polarization-dependent interactions of electrons, positrons, and photons with matter. The measurements agree with calculations, corresponding to 80% polarization for positrons near 6 MeV and 90% for electrons near 7 MeV. (orig.)

Gene analogue finder: a GRID solution for finding functionally analogous gene products

Directory of Open Access Journals (Sweden)

Licciulli Flavio

2007-09-01

Full Text Available Abstract Background To date more than 2,1 million gene products from more than 100000 different species have been described specifying their function, the processes they are involved in and their cellular localization using a very well defined and structured vocabulary, the gene ontology (GO. Such vast, well defined knowledge opens the possibility of compare gene products at the level of functionality, finding gene products which have a similar function or are involved in similar biological processes without relying on the conventional sequence similarity approach. Comparisons within such a large space of knowledge are highly data and computing intensive. For this reason this project was based upon the use of the computational GRID, a technology offering large computing and storage resources. Results We have developed a tool, GENe AnaloGue FINdEr (ENGINE that parallelizes the search process and distributes the calculation and data over the computational GRID, splitting the process into many sub-processes and joining the calculation and the data on the same machine and therefore completing the whole search in about 3 days instead of occupying one single machine for more than 5 CPU years. The results of the functional comparison contain potential functional analogues for more than 79000 gene products from the most important species. 46% of the analyzed gene products are well enough described for such an analysis to individuate functional analogues, such as well-known members of the same gene family, or gene products with similar functions which would never have been associated by standard methods. Conclusion ENGINE has produced a list of potential functionally analogous relations between gene products within and between species using, in place of the sequence, the gene description of the GO, thus demonstrating the potential of the GO. However, the current limiting factor is the quality of the associations of many gene products from non

Experiments with Fermilab polarized proton and polarized antiproton beams

International Nuclear Information System (INIS)

Yokosawa, A.

1990-01-01

We summarize activities concerning the Fermilab polarized beams. They include a brief description of the polarized-beam facility, measurements of beam polarization by polarimeters, asymmetry measurements in the π degree production at high p perpendicular and in the Λ (Σ degree), π ± , π degree production at large x F , and Δσ L (pp, bar pp) measurements. 18 refs

Correlating Information Contents of Gene Ontology Terms to Infer Semantic Similarity of Gene Products

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Mingxin Gan

2014-01-01

Full Text Available Successful applications of the gene ontology to the inference of functional relationships between gene products in recent years have raised the need for computational methods to automatically calculate semantic similarity between gene products based on semantic similarity of gene ontology terms. Nevertheless, existing methods, though having been widely used in a variety of applications, may significantly overestimate semantic similarity between genes that are actually not functionally related, thereby yielding misleading results in applications. To overcome this limitation, we propose to represent a gene product as a vector that is composed of information contents of gene ontology terms annotated for the gene product, and we suggest calculating similarity between two gene products as the relatedness of their corresponding vectors using three measures: Pearson’s correlation coefficient, cosine similarity, and the Jaccard index. We focus on the biological process domain of the gene ontology and annotations of yeast proteins to study the effectiveness of the proposed measures. Results show that semantic similarity scores calculated using the proposed measures are more consistent with known biological knowledge than those derived using a list of existing methods, suggesting the effectiveness of our method in characterizing functional relationships between gene products.

Plasma Irregularity Production in the Polar Cap F-Region Ionosphere

Science.gov (United States)

Lamarche, Leslie

Plasma in the Earth's ionosphere is highly irregular on scales ranging between a few centimeters and hundreds of kilometers. Small-scale irregularities or plasma waves can scatter radio waves resulting in a loss of signal for navigation and communication networks. The polar region is particularly susceptible to strong disturbances due to its direct connection with the Sun's magnetic field and energetic particles. In this thesis, factors that contribute to the production of decameter-scale plasma irregularities in the polar F region ionosphere are investigated. Both global and local control of irregularity production are studied, i.e. we consider global solar control through solar illumination and solar wind as well as much more local control by plasma density gradients and convection electric field. In the first experimental study, solar control of irregularity production is investigated using the Super Dual Auroral Radar Network (SuperDARN) radar at McMurdo, Antarctica. The occurrence trends for irregularities are analyzed statistically and a model is developed that describes the location of radar echoes within the radar's field-of-view. The trends are explained through variations in background plasma density with solar illumination affecting radar beam propagation. However, it is found that the irregularity occurrence during the night is higher than expected from ray tracing simulations based on a standard ionospheric density model. The high occurrence at night implies an additional source of plasma density and it is proposed that large-scale density enhancements called polar patches may be the source of this density. Additionally, occurrence maximizes around the terminator due to different competing irregularity production processes that favor a more or less sunlit ionosphere. The second study is concerned with modeling irregularity characteristics near a large-scale density gradient reversal, such as those expected near polar patches, with a particular focus on

Maternal co-ordinate gene regulation and axis polarity in the scuttle fly Megaselia abdita.

Science.gov (United States)

Wotton, Karl R; Jiménez-Guri, Eva; Jaeger, Johannes

2015-03-01

Axis specification and segment determination in dipteran insects are an excellent model system for comparative analyses of gene network evolution. Antero-posterior polarity of the embryo is established through systems of maternal morphogen gradients. In Drosophila melanogaster, the anterior system acts through opposing gradients of Bicoid (Bcd) and Caudal (Cad), while the posterior system involves Nanos (Nos) and Hunchback (Hb) protein. These systems act redundantly. Both Bcd and Hb need to be eliminated to cause a complete loss of polarity resulting in mirror-duplicated abdomens, so-called bicaudal phenotypes. In contrast, knock-down of bcd alone is sufficient to induce double abdomens in non-drosophilid cyclorrhaphan dipterans such as the hoverfly Episyrphus balteatus or the scuttle fly Megaselia abdita. We investigate conserved and divergent aspects of axis specification in the cyclorrhaphan lineage through a detailed study of the establishment and regulatory effect of maternal gradients in M. abdita. Our results show that the function of the anterior maternal system is highly conserved in this species, despite the loss of maternal cad expression. In contrast, hb does not activate gap genes in this species. The absence of this activatory role provides a precise genetic explanation for the loss of polarity upon bcd knock-down in M. abdita, and suggests a general scenario in which the posterior maternal system is increasingly replaced by the anterior one during the evolution of the cyclorrhaphan dipteran lineage.

Maternal co-ordinate gene regulation and axis polarity in the scuttle fly Megaselia abdita.

Directory of Open Access Journals (Sweden)

Karl R Wotton

2015-03-01

Full Text Available Axis specification and segment determination in dipteran insects are an excellent model system for comparative analyses of gene network evolution. Antero-posterior polarity of the embryo is established through systems of maternal morphogen gradients. In Drosophila melanogaster, the anterior system acts through opposing gradients of Bicoid (Bcd and Caudal (Cad, while the posterior system involves Nanos (Nos and Hunchback (Hb protein. These systems act redundantly. Both Bcd and Hb need to be eliminated to cause a complete loss of polarity resulting in mirror-duplicated abdomens, so-called bicaudal phenotypes. In contrast, knock-down of bcd alone is sufficient to induce double abdomens in non-drosophilid cyclorrhaphan dipterans such as the hoverfly Episyrphus balteatus or the scuttle fly Megaselia abdita. We investigate conserved and divergent aspects of axis specification in the cyclorrhaphan lineage through a detailed study of the establishment and regulatory effect of maternal gradients in M. abdita. Our results show that the function of the anterior maternal system is highly conserved in this species, despite the loss of maternal cad expression. In contrast, hb does not activate gap genes in this species. The absence of this activatory role provides a precise genetic explanation for the loss of polarity upon bcd knock-down in M. abdita, and suggests a general scenario in which the posterior maternal system is increasingly replaced by the anterior one during the evolution of the cyclorrhaphan dipteran lineage.

Spin transfers for baryon production in polarized pp collisions at RHIC-BNL

International Nuclear Information System (INIS)

Ma BoQiang; Schmidt, Ivan; Soffer, Jacques; Yang Jianjun

2002-01-01

We consider the inclusive production of longitudinally polarized baryons in p→p collisions at RHIC-BNL, with one longitudinally polarized proton. We study the spin transfer between the initial proton and the produced baryon as a function of its rapidity and we elucidate its sensitivity to the quark helicity distributions of the proton and to the polarized fragmentation functions of the quark into the baryon. We make predictions using an SU(6) quark spectator model and a perturbative QCD (pQCD) based model. We discuss these different predictions, and what can be learned from them, in view of the forthcoming experiments at RHIC-BNL

Radiative corrections to chargino production in electron-positron collisions with polarized beams

International Nuclear Information System (INIS)

Diaz, Marco A.; King, Stephen F.; Ross, Douglas A.

2001-01-01

We study radiative corrections to chargino production at linear colliders with polarized electron beams. We calculate the one-loop corrected cross sections for polarized electon beams due to three families of quarks and squarks, working in the {ovr MS} scheme, extending our previous calculation of the unpolarized cross section with one-loop corrections due to the third family of quarks and squarks. In some cases we find rather large corrections to the tree-level cross sections. For example, for the case of right-handed polarized electrons and large tanβ the corrections can be of order 30%, allowing sensitivity to the squark mass parameters

The Anti-Oxidant Defense System of the Marine Polar Ciliate Euplotes nobilii: Characterization of the MsrB Gene Family

Directory of Open Access Journals (Sweden)

Francesca Ricci

2017-01-01

Full Text Available Organisms living in polar waters must cope with an extremely stressful environment dominated by freezing temperatures, high oxygen concentrations and UV radiation. To shed light on the genetic mechanisms on which the polar marine ciliate, Euplotes nobilii, relies to effectively cope with the oxidative stress, attention was focused on methionine sulfoxide reductases which repair proteins with oxidized methionines. A family of four structurally distinct MsrB genes, encoding enzymes specific for the reduction of the methionine-sulfoxide R-forms, were identified from a draft of the E. nobilii transcriptionally active (macronuclear genome. The En-MsrB genes are constitutively expressed to synthesize proteins markedly different in amino acid sequence, number of CXXC motifs for zinc-ion binding, and presence/absence of a cysteine residue specific for the mechanism of enzyme regeneration. The En-MsrB proteins take different localizations in the nucleus, mitochondria, cytosol and endoplasmic reticulum, ensuring a pervasive protection of all the major subcellular compartments from the oxidative damage. These observations have suggested to regard the En-MsrB gene activity as playing a central role in the genetic mechanism that enables E. nobilii and ciliates in general to live in the polar environment.

Status of the analysis for the search of polarization in the antiproton production process

International Nuclear Information System (INIS)

Alfs, D.; Asaturyan, A.; Carmignotto, M.; Diermaier, M.; Eyrich, W.; Głowacz, B.; Grzonka, D.; Hauenstein, F.; Horn, T.; Kilian, K.; Malbrunot-Ettenauer, S.; Mkrtchyan, A.; Mkrtchyan, H.; Moskal, P.; Nadel-Turonski, P.; Oelert, W.; Ritman, J.; Sefzick, T.; Tadevosyan, V.; Widmann, E.; Wolke, M.; Zhamkochyan, S.; Zieliński, M.; Zink, A.; Zmeskal, J.

2016-01-01

The P-349 experiment aims to test whether for antiprotons the production process itself can be a source of polarization in view of the preparation of a polarized antiproton beam. In this article we present the details of performed measurements and report on the status of the ongoing analysis.

Polarized secondary radioactive beams

International Nuclear Information System (INIS)

Zaika, N.I.

1992-01-01

Three methods of polarized radioactive nuclei beam production: a) a method nuclear interaction of the non-polarized or polarized charged projectiles with target nuclei; b) a method of polarization of stopped reaction radioactive products in a special polarized ion source with than following acceleration; c) a polarization of radioactive nuclei circulating in a storage ring are considered. Possible life times of the radioactive ions for these methods are determined. General schemes of the polarization method realizations and depolarization problems are discussed

In Azospirillum brasilense, mutations in flmA or flmB genes affect polar flagellum assembly, surface polysaccharides, and attachment to maize roots.

Science.gov (United States)

Rossi, Fernando Ariel; Medeot, Daniela Beatriz; Liaudat, Juan Pablo; Pistorio, Mariano; Jofré, Edgardo

2016-09-01

Azospirillum brasilense is a soil bacterium capable of promoting plant growth. Several surface components were previously reported to be involved in the attachment of A. brasilense to root plants. Among these components are the exopolysaccharide (EPS), lipopolysaccharide (LPS) and the polar flagellum. Flagellin from polar flagellum is glycosylated and it was suggested that genes involved in such a posttranslational modification are the same ones involved in the biosynthesis of sugars present in the O-antigen of the LPS. In this work, we report on the characterization of two homologs present in A. brasilense Cd, to the well characterized flagellin modification genes, flmA and flmB, from Aeromonas caviae. We show that mutations in either flmA or flmB genes of A. brasilense resulted in non-motile cells due to alterations in the polar flagellum assembly. Moreover, these mutations also affected the capability of A. brasilense cells to adsorb to maize roots and to produce LPS and EPS. By generating a mutant containing the polar flagellum affected in their rotation, we show the importance of the bacterial motility for the early colonization of maize roots. Copyright © 2016 Elsevier GmbH. All rights reserved.

CryoSat Mission over Polar Region: Data quality status and product evolutions

Science.gov (United States)

Bouffard, J.; Parrinello, T.; Féménias, P.; Fornari, M.; Scagliola, M.; Baker, S.; Brockley, D.; Mannan, R.; Hall, A.; Webb, E.; Garcia-Mondéjar, A.; Roca, M.; Mantovani, P. L.

2015-12-01

Over the past 20 years, satellite radar altimetry has shown its ability to revolutionize our understanding of the ocean and climate. These advances were mainly limited to ice-free regions, leaving aside large portions of Polar Regions. Launched in 2010, the polar-orbiting CryoSat Satellite was designed to measure the changes in the thickness of polar sea ice and the elevation of the ice sheets and mountain glaciers. To reach this goal, the CryoSat products have to meet the highest performance, through constant improvements of the associated Instrument Processing Facility. Since April 2015, the CryoSat ice products are generated with the Baseline C; which represents a major processor upgrade. Several improvements have been implemented belong this new Baseline, such as SAR retracker optimized for Freeboard retrieval and a coarse slant correction, which is applied directly on the stack data in conjunction with the window delay alignment. The resulting waveforms show more power and the trailing edge is modified, leading to improved L2 geophysical parameters. This paper provides an overview of the CryoSat data characteristics, assessment and exploitation over Polar Regions. In this respect, new science-oriented diagnostics have been implemented to thoroughly understand the signatures within the altimeter signals over sea-ice and land ice areas, to validate the data and therefore propose potential way of improvements for next CryoSat processing Baselines.

Measurement of gluon polarization through spin asymmetry in the production of charmed mesons

International Nuclear Information System (INIS)

Panebianco, St.

2005-09-01

The main aim of the COMPASS experiment is the measurement of the gluon polarization in the nucleon, which can be accessed by the spin asymmetry in the scattering of a polarized muon beam on a polarized nucleon target. The process sensitive to the gluon polarization is the photon-gluon fusion, which can be tagged in the cleanest way by looking at the production of D 0 mesons. At COMPASS, D 0 mesons are reconstructed from the invariant mass of their decay products. However, it is a rare process, dominated by a large combinatorial background. This thesis presents some studies devoted to the improvement of the charmed mesons reconstruction. The measurement of the efficiency and the space resolution of the 3 drift chamber stations of the COMPASS spectrometer is a necessary step in understanding the performances of the reconstruction of particle trajectories. The hadron identification, which is fundamental in the reconstruction of charmed meson decay, is performed by a RICH detector. A statistical treatment of signal and background, together with an upgrade project to replace the present front-end electronics, have been developed in order to improve the particle identification performances. The second part of this work concerns the spin asymmetry measurement, which requires the application of event selection criteria in order to minimize the noise over signal ratio in the D 0 invariant mass, and the development of event-weighting methods to reduce the statistical error. This work presents a preliminary result, based on 2002-2004 statistics, which is the ΔG/G measurement from open charm production. Although the error bars are large, the measured gluon polarization is compatible with zero. Given the present accuracy, this result is compatible with the existing direct measurements from other channels. However, it does not allow to distinguish between different theoretical models. (author)

Evidence for longitudinal photon polarization in muon-pair production by pions

International Nuclear Information System (INIS)

Anderson, K.J.; Coleman, R.N.; Karhi, K.P.; Newman, C.B.; Pilcher, J.E.; Rosenberg, E.I.; Thaler, J.J.; Hogan, G.E.; McDonald, K.T.; Sanders, G.H.; Smith, A.J.S.

1979-01-01

Data on μ-pair production by pions are examined as a function of x and P/sub T/ for longitudinal photon polarization. Evidence in the form of a sin 2 theta* term in the helicity angular distribution is observed for x near 1. This is conclusive evidence that production in this region is not predominantly through on-shell quark annihilation. The result is consistent with a calculation based on quantum chromodynamics

Topology and robustness in the Drosophila segment polarity network.

Directory of Open Access Journals (Sweden)

Nicholas T Ingolia

2004-06-01

Full Text Available A complex hierarchy of genetic interactions converts a single-celled Drosophila melanogaster egg into a multicellular embryo with 14 segments. Previously, von Dassow et al. reported that a mathematical model of the genetic interactions that defined the polarity of segments (the segment polarity network was robust (von Dassow et al. 2000. As quantitative information about the system was unavailable, parameters were sampled randomly. A surprisingly large fraction of these parameter sets allowed the model to maintain and elaborate on the segment polarity pattern. This robustness is due to the positive feedback of gene products on their own expression, which induces individual cells in a model segment to adopt different stable expression states (bistability corresponding to different cell types in the segment polarity pattern. A positive feedback loop will only yield multiple stable states when the parameters that describe it satisfy a particular inequality. By testing which random parameter sets satisfy these inequalities, I show that bistability is necessary to form the segment polarity pattern and serves as a strong predictor of which parameter sets will succeed in forming the pattern. Although the original model was robust to parameter variation, it could not reproduce the observed effects of cell division on the pattern of gene expression. I present a modified version that incorporates recent experimental evidence and does successfully mimic the consequences of cell division. The behavior of this modified model can also be understood in terms of bistability in positive feedback of gene expression. I discuss how this topological property of networks provides robust pattern formation and how large changes in parameters can change the specific pattern produced by a network.

Polarization as a probe to the production mechanisms of charmonium in πN collisions

International Nuclear Information System (INIS)

Tang, W.K.; Brodsky, S.J.; Vaenttinen, M.; Hoyer, P.

1994-07-01

Measurements of the polarization of J/ψ produced in pion-nucleus collisions are in disagreement with leading twist QCD prediction where J/ψ is observed to have negligible polarization whereas theory predicts substantial polarization. The authors argue that this discrepancy cannot be due to poorly known structure functions nor the relative production rates of J/ψ and χ j . The disagreement between theory and experiment suggests important higher twist corrections, as has earlier been surmised from the anomalous non-factorized nuclear A-dependence of the J/ψ cross section

3D view to tumor suppression: Lkb1, polarity and the arrest of oncogenic c-Myc.

Science.gov (United States)

Partanen, Johanna I; Nieminen, Anni I; Klefstrom, Juha

2009-03-01

Machiavelli wrote, in his famous political treatise Il Principe, about disrupting organization by planting seeds of dissension or by eliminating necessary support elements. Tumor cells do exactly that by disrupting the organized architecture of epithelial cell layers during progression from contained benign tumor to full-blown invasive cancer. However, it is still unclear whether tumor cells primarily break free by activating oncogenes powerful enough to cause chaos or by eliminating tumor suppressor genes guarding the order of the epithelial organization. Studies in Drosophila have exposed genes that encode key regulators of the epithelial apicobasal polarity and which, upon inactivation, cause disorganization of the epithelial layers and promote unscheduled cell proliferation. These polarity regulator/tumor suppressor proteins, which include products of neoplastic tumor suppressor genes (nTSGs), are carefully positioned in polarized epithelial cells to maintain the order of epithelial structures and to impose a restraint on cell proliferation. In this review, we have explored the presence and prevalence of somatic mutations in the human counterparts of Drosophila polarity regulator/tumor suppressor genes across the human cancers. The screen points out LKB1, which is a causal genetic lesion in Peutz-Jeghers cancer syndrome, a gene mutated in certain sporadic cancers and a human homologue of the fly polarity gene par-4. We review the evidence linking Lkb1 protein to polarity regulation in the scope of our recent results suggesting a coupled role for Lkb1 as an architect of organized acinar structures and a suppressor of oncogenic c-Myc. We finally present models to explain how Lkb1-dependent formation of epithelial architecture is coupled to suppression of normal and oncogene-induced proliferation.

A new measure for functional similarity of gene products based on Gene Ontology

Directory of Open Access Journals (Sweden)

Lengauer Thomas

2006-06-01

Full Text Available Abstract Background Gene Ontology (GO is a standard vocabulary of functional terms and allows for coherent annotation of gene products. These annotations provide a basis for new methods that compare gene products regarding their molecular function and biological role. Results We present a new method for comparing sets of GO terms and for assessing the functional similarity of gene products. The method relies on two semantic similarity measures; simRel and funSim. One measure (simRel is applied in the comparison of the biological processes found in different groups of organisms. The other measure (funSim is used to find functionally related gene products within the same or between different genomes. Results indicate that the method, in addition to being in good agreement with established sequence similarity approaches, also provides a means for the identification of functionally related proteins independent of evolutionary relationships. The method is also applied to estimating functional similarity between all proteins in Saccharomyces cerevisiae and to visualizing the molecular function space of yeast in a map of the functional space. A similar approach is used to visualize the functional relationships between protein families. Conclusion The approach enables the comparison of the underlying molecular biology of different taxonomic groups and provides a new comparative genomics tool identifying functionally related gene products independent of homology. The proposed map of the functional space provides a new global view on the functional relationships between gene products or protein families.

Sources of polarized neutrons

International Nuclear Information System (INIS)

Walter, L.

1983-01-01

Various sources of polarized neutrons are reviewed. Monoenergetic source produced with unpolarized or polarized beams, white sources of polarized neutrons, production by transmissions through polarized hydrogen targets and polarized thermal neutronsare discussed, with appropriate applications included. (U.K.)

The arabidopsis thaliana AGRAVITROPIC 1 gene encodes a component of the polar-auxin-transport efflux carrier

Science.gov (United States)

Chen, R.; Hilson, P.; Sedbrook, J.; Rosen, E.; Caspar, T.; Masson, P. H.

1998-01-01

Auxins are plant hormones that mediate many aspects of plant growth and development. In higher plants, auxins are polarly transported from sites of synthesis in the shoot apex to their sites of action in the basal regions of shoots and in roots. Polar auxin transport is an important aspect of auxin functions and is mediated by cellular influx and efflux carriers. Little is known about the molecular identity of its regulatory component, the efflux carrier [Estelle, M. (1996) Current Biol. 6, 1589-1591]. Here we show that mutations in the Arabidopsis thaliana AGRAVITROPIC 1 (AGR1) gene involved in root gravitropism confer increased root-growth sensitivity to auxin and decreased sensitivity to ethylene and an auxin transport inhibitor, and cause retention of exogenously added auxin in root tip cells. We used positional cloning to show that AGR1 encodes a putative transmembrane protein whose amino acid sequence shares homologies with bacterial transporters. When expressed in Saccharomyces cerevisiae, AGR1 promotes an increased efflux of radiolabeled IAA from the cells and confers increased resistance to fluoro-IAA, a toxic IAA-derived compound. AGR1 transcripts were localized to the root distal elongation zone, a region undergoing a curvature response upon gravistimulation. We have identified several AGR1-related genes in Arabidopsis, suggesting a global role of this gene family in the control of auxin-regulated growth and developmental processes.

Production of a Scalar Boson and a Fermion Pair in Arbitrarily Polarized e - e + Beams

Science.gov (United States)

Abdullayev, S. K.; Gojayev, M. Sh.; Nasibova, N. A.

2018-05-01

Within the framework of the Standard Model (Minimal Supersymmetric Standard Model) we consider the production of the scalar boson HSM (h; H) and a fermion pair ff- in arbitrarily polarized, counterpropagating electron-positron beams e - e + ⇒ HSM (h; H) ff-. Characteristic features of the behavior of the cross sections and polarization characteristics (right-left spin asymmetry, degree of longitudinal polarization of the fermion, and transverse spin asymmetry) are investigated and elucidated as functions of the energy of the electron-positron beams and the mass of the scalar boson.

Measurement of Longitudinal Spin Asymmetries for Weak Boson Production in Polarized Proton-Proton Collisions at RHIC

Science.gov (United States)

Adamczyk, L.; Adkins, J. K.; Agakishiev, G.; Aggarwal, M. M.; Ahammed, Z.; Alekseev, I.; Alford, J.; Anson, C. D.; Aparin, A.; Arkhipkin, D.; Aschenauer, E. C.; Averichev, G. S.; Balewski, J.; Banerjee, A.; Beavis, D. R.; Bellwied, R.; Bhasin, A.; Bhati, A. K.; Bhattarai, P.; Bichsel, H.; Bielcik, J.; Bielcikova, J.; Bland, L. C.; Bordyuzhin, I. G.; Borowski, W.; Bouchet, J.; Brandin, A. V.; Brovko, S. G.; Bültmann, S.; Bunzarov, I.; Burton, T. P.; Butterworth, J.; Caines, H.; Calderón de la Barca Sánchez, M.; Campbell, J. M.; Cebra, D.; Cendejas, R.; Cervantes, M. C.; Chaloupka, P.; Chang, Z.; Chattopadhyay, S.; Chen, H. F.; Chen, J. H.; Chen, L.; Cheng, J.; Cherney, M.; Chikanian, A.; Christie, W.; Chwastowski, J.; Codrington, M. J. M.; Contin, G.; Cramer, J. G.; Crawford, H. J.; Cui, X.; Das, S.; Davila Leyva, A.; De Silva, L. C.; Debbe, R. R.; Dedovich, T. G.; Deng, J.; Derevschikov, A. A.; Derradi de Souza, R.; Dhamija, S.; di Ruzza, B.; Didenko, L.; Dilks, C.; Ding, F.; Djawotho, P.; Dong, X.; Drachenberg, J. L.; Draper, J. E.; Du, C. M.; Dunkelberger, L. E.; Dunlop, J. C.; Efimov, L. G.; Engelage, J.; Engle, K. S.; Eppley, G.; Eun, L.; Evdokimov, O.; Eyser, O.; Fatemi, R.; Fazio, S.; Fedorisin, J.; Filip, P.; Finch, E.; Fisyak, Y.; Flores, C. E.; Gagliardi, C. A.; Gangadharan, D. R.; Garand, D.; Geurts, F.; Gibson, A.; Girard, M.; Gliske, S.; Greiner, L.; Grosnick, D.; Gunarathne, D. S.; Guo, Y.; Gupta, A.; Gupta, S.; Guryn, W.; Haag, B.; Hamed, A.; Han, L.-X.; Haque, R.; Harris, J. W.; Heppelmann, S.; Hirsch, A.; Hoffmann, G. W.; Hofman, D. J.; Horvat, S.; Huang, B.; Huang, H. Z.; Huang, X.; Huck, P.; Humanic, T. J.; Igo, G.; Jacobs, W. W.; Jang, H.; Judd, E. G.; Kabana, S.; Kalinkin, D.; Kang, K.; Kauder, K.; Ke, H. W.; Keane, D.; Kechechyan, A.; Kesich, A.; Khan, Z. H.; Kikola, D. P.; Kisel, I.; Kisiel, A.; Koetke, D. D.; Kollegger, T.; Konzer, J.; Koralt, I.; Kosarzewski, L. K.; Kotchenda, L.; Kraishan, A. F.; Kravtsov, P.; Krueger, K.; Kulakov, I.; Kumar, L.; Kycia, R. A.; Lamont, M. A. C.; Landgraf, J. M.; Landry, K. D.; Lauret, J.; Lebedev, A.; Lednicky, R.; Lee, J. H.; LeVine, M. J.; Li, C.; Li, W.; Li, X.; Li, X.; Li, Y.; Li, Z. M.; Lisa, M. A.; Liu, F.; Ljubicic, T.; Llope, W. J.; Lomnitz, M.; Longacre, R. S.; Luo, X.; Ma, G. L.; Ma, Y. G.; Madagodagettige Don, D. M. M. D.; Mahapatra, D. P.; Majka, R.; Margetis, S.; Markert, C.; Masui, H.; Matis, H. S.; McDonald, D.; McShane, T. S.; Minaev, N. G.; Mioduszewski, S.; Mohanty, B.; Mondal, M. M.; Morozov, D. A.; Mustafa, M. K.; Nandi, B. K.; Nasim, Md.; Nayak, T. K.; Nelson, J. M.; Nigmatkulov, G.; Nogach, L. V.; Noh, S. Y.; Novak, J.; Nurushev, S. B.; Odyniec, G.; Ogawa, A.; Oh, K.; Ohlson, A.; Okorokov, V.; Oldag, E. W.; Olvitt, D. L.; Pachr, M.; Page, B. S.; Pal, S. K.; Pan, Y. X.; Pandit, Y.; Panebratsev, Y.; Pawlak, T.; Pawlik, B.; Pei, H.; Perkins, C.; Peryt, W.; Pile, P.; Planinic, M.; Pluta, J.; Poljak, N.; Poniatowska, K.; Porter, J.; Poskanzer, A. M.; Pruthi, N. K.; Przybycien, M.; Pujahari, P. R.; Putschke, J.; Qiu, H.; Quintero, A.; Ramachandran, S.; Raniwala, R.; Raniwala, S.; Ray, R. L.; Riley, C. K.; Ritter, H. G.; Roberts, J. B.; Rogachevskiy, O. V.; Romero, J. L.; Ross, J. F.; Roy, A.; Ruan, L.; Rusnak, J.; Rusnakova, O.; Sahoo, N. R.; Sahu, P. K.; Sakrejda, I.; Salur, S.; Sandweiss, J.; Sangaline, E.; Sarkar, A.; Schambach, J.; Scharenberg, R. P.; Schmah, A. M.; Schmidke, W. B.; Schmitz, N.; Seger, J.; Seyboth, P.; Shah, N.; Shahaliev, E.; Shanmuganathan, P. V.; Shao, M.; Sharma, B.; Shen, W. Q.; Shi, S. S.; Shou, Q. Y.; Sichtermann, E. P.; Singaraju, R. N.; Skoby, M. J.; Smirnov, D.; Smirnov, N.; Solanki, D.; Sorensen, P.; Spinka, H. M.; Srivastava, B.; Stanislaus, T. D. S.; Stevens, J. R.; Stock, R.; Strikhanov, M.; Stringfellow, B.; Sumbera, M.; Sun, X.; Sun, X. M.; Sun, Y.; Sun, Z.; Surrow, B.; Svirida, D. N.; Symons, T. J. M.; Szelezniak, M. A.; Takahashi, J.; Tang, A. H.; Tang, Z.; Tarnowsky, T.; Thomas, J. H.; Timmins, A. R.; Tlusty, D.; Tokarev, M.; Trentalange, S.; Tribble, R. E.; Tribedy, P.; Trzeciak, B. A.; Tsai, O. D.; Turnau, J.; Ullrich, T.; Underwood, D. G.; Van Buren, G.; van Nieuwenhuizen, G.; Vandenbroucke, M.; Vanfossen, J. A.; Varma, R.; Vasconcelos, G. M. S.; Vasiliev, A. N.; Vertesi, R.; Videbæk, F.; Viyogi, Y. P.; Vokal, S.; Vossen, A.; Wada, M.; Wang, F.; Wang, G.; Wang, H.; Wang, J. S.; Wang, X. L.; Wang, Y.; Wang, Y.; Webb, G.; Webb, J. C.; Westfall, G. D.; Wieman, H.; Wissink, S. W.; Witt, R.; Wu, Y. F.; Xiao, Z.; Xie, W.; Xin, K.; Xu, H.; Xu, J.; Xu, N.; Xu, Q. H.; Xu, Y.; Xu, Z.; Yan, W.; Yang, C.; Yang, Y.; Yang, Y.; Ye, Z.; Yepes, P.; Yi, L.; Yip, K.; Yoo, I.-K.; Yu, N.; Zawisza, Y.; Zbroszczyk, H.; Zha, W.; Zhang, J. B.; Zhang, J. L.; Zhang, S.; Zhang, X. P.; Zhang, Y.; Zhang, Z. P.; Zhao, F.; Zhao, J.; Zhong, C.; Zhu, X.; Zhu, Y. H.; Zoulkarneeva, Y.; Zyzak, M.; STAR Collaboration

2014-08-01

We report measurements of single- and double-spin asymmetries for W± and Z/γ* boson production in longitudinally polarized p+p collisions at √s =510 GeV by the STAR experiment at RHIC. The asymmetries for W± were measured as a function of the decay lepton pseudorapidity, which provides a theoretically clean probe of the proton's polarized quark distributions at the scale of the W mass. The results are compared to theoretical predictions, constrained by polarized deep inelastic scattering measurements, and show a preference for a sizable, positive up antiquark polarization in the range 0.05

Production of spin-polarized unstable nuclei by using polarized electron capture process

International Nuclear Information System (INIS)

Shimizu, S.

1998-01-01

Measurements of emitted radiation from spin polarized nuclei are used to get information on electromagnetic moment of ground state unstable nuclei together with spin or parity state of excited states of their decayed (daughter) nuclei. These data are known to be useful for experimental investigation into the structure of unstable nuclei far from the stability line. The present study aims to establish a general method applicable to 11 Be and 16 N nuclei. To produce spin polarization, a new method in which the electron spin polarization of Rb is firstly produced by laser pumping, then the electron is transferred to the unstable nuclear beam (RNB) when they passes through the Rb vapor is proposed. Finally the polarized RNB will be implanted into superfluid helium to remain with a long spin-relaxation time. Future experimental set up for the above measurement adopted in the available radioactive nuclear beam facilities is briefly described. (Ohno, S.)

Polarization observables in elementary K+-production

International Nuclear Information System (INIS)

Adelseck, R.A.; Saghai, B.

1989-01-01

The theoretical and experimental status of positive kaon photoproduction off protons from threshold up to 1.4 GeV is briefly reviewed. A model based on Feynman diagrams including several hadronic resonance exchanges is presented. The results of this model are compared with the differential cross section and the Λ-polarization asymmetry data. Predictions on other polarization observables are reported and the need for further measurements is emphasized

Spin polarization in top pair production in association with two photons at NLO+PS

CERN Document Server

Luisoni, Gionata

2018-01-01

This talk focuses on the impact of top-quark spin polarization effects in Higgs boson production in association with a top-quark pair, where the Higgs boson decays to two photons. Predictions for the signal are compared with direct top-quark pair production in association with two photons at NLO+PS.

Spin polarization in top pair production in association with two photons at NLO+PS

CERN Document Server

Luisoni, Gionata

2017-01-01

This talk focuses on the impact of top-quark spin polarization effects in Higgs boson production in association with a top-quark pair, where the Higgs boson decays to two photons. Predictions for the signal are compared with direct top-quark pair production in association with two photons at NLO+PS.

CP-sensitive observables in chargino production with transverse e± beam polarization

International Nuclear Information System (INIS)

Bartl, A.; Hohenwarter-Sodek, K.; Kernreiter, T.; Rud, H.

2004-01-01

We consider the process e + e - →χ + i χ - j at a linear collider with transverse e ± beam polarization. We investigate the influence of the CP phases on azimuthal asymmetries in e + e - →χ + i χ - j with subsequent two-body decays χ - j →ν l l - and χ - j →W - χ 0 1 . We show that triple product correlations involving the transverse e ± beam polarization vanish if at least one subsequent chargino decay is not observed. We derive this result within the minimal supersymmetric standard model (MSSM) with complex parameters; however, it holds also in the general MSSM with SUSY flavor violation. (orig.)

Measurement of longitudinal spin asymmetries for weak boson production in polarized proton-proton collisions at RHIC.

Science.gov (United States)

Adamczyk, L; Adkins, J K; Agakishiev, G; Aggarwal, M M; Ahammed, Z; Alekseev, I; Alford, J; Anson, C D; Aparin, A; Arkhipkin, D; Aschenauer, E C; Averichev, G S; Balewski, J; Banerjee, A; Beavis, D R; Bellwied, R; Bhasin, A; Bhati, A K; Bhattarai, P; Bichsel, H; Bielcik, J; Bielcikova, J; Bland, L C; Bordyuzhin, I G; Borowski, W; Bouchet, J; Brandin, A V; Brovko, S G; Bültmann, S; Bunzarov, I; Burton, T P; Butterworth, J; Caines, H; Calderón de la Barca Sánchez, M; Campbell, J M; Cebra, D; Cendejas, R; Cervantes, M C; Chaloupka, P; Chang, Z; Chattopadhyay, S; Chen, H F; Chen, J H; Chen, L; Cheng, J; Cherney, M; Chikanian, A; Christie, W; Chwastowski, J; Codrington, M J M; Contin, G; Cramer, J G; Crawford, H J; Cui, X; Das, S; Davila Leyva, A; De Silva, L C; Debbe, R R; Dedovich, T G; Deng, J; Derevschikov, A A; Derradi de Souza, R; Dhamija, S; di Ruzza, B; Didenko, L; Dilks, C; Ding, F; Djawotho, P; Dong, X; Drachenberg, J L; Draper, J E; Du, C M; Dunkelberger, L E; Dunlop, J C; Efimov, L G; Engelage, J; Engle, K S; Eppley, G; Eun, L; Evdokimov, O; Eyser, O; Fatemi, R; Fazio, S; Fedorisin, J; Filip, P; Finch, E; Fisyak, Y; Flores, C E; Gagliardi, C A; Gangadharan, D R; Garand, D; Geurts, F; Gibson, A; Girard, M; Gliske, S; Greiner, L; Grosnick, D; Gunarathne, D S; Guo, Y; Gupta, A; Gupta, S; Guryn, W; Haag, B; Hamed, A; Han, L-X; Haque, R; Harris, J W; Heppelmann, S; Hirsch, A; Hoffmann, G W; Hofman, D J; Horvat, S; Huang, B; Huang, H Z; Huang, X; Huck, P; Humanic, T J; Igo, G; Jacobs, W W; Jang, H; Judd, E G; Kabana, S; Kalinkin, D; Kang, K; Kauder, K; Ke, H W; Keane, D; Kechechyan, A; Kesich, A; Khan, Z H; Kikola, D P; Kisel, I; Kisiel, A; Koetke, D D; Kollegger, T; Konzer, J; Koralt, I; Kosarzewski, L K; Kotchenda, L; Kraishan, A F; Kravtsov, P; Krueger, K; Kulakov, I; Kumar, L; Kycia, R A; Lamont, M A C; Landgraf, J M; Landry, K D; Lauret, J; Lebedev, A; Lednicky, R; Lee, J H; LeVine, M J; Li, C; Li, W; Li, X; Li, X; Li, Y; Li, Z M; Lisa, M A; Liu, F; Ljubicic, T; Llope, W J; Lomnitz, M; Longacre, R S; Luo, X; Ma, G L; Ma, Y G; Madagodagettige Don, D M M D; Mahapatra, D P; Majka, R; Margetis, S; Markert, C; Masui, H; Matis, H S; McDonald, D; McShane, T S; Minaev, N G; Mioduszewski, S; Mohanty, B; Mondal, M M; Morozov, D A; Mustafa, M K; Nandi, B K; Nasim, Md; Nayak, T K; Nelson, J M; Nigmatkulov, G; Nogach, L V; Noh, S Y; Novak, J; Nurushev, S B; Odyniec, G; Ogawa, A; Oh, K; Ohlson, A; Okorokov, V; Oldag, E W; Olvitt, D L; Pachr, M; Page, B S; Pal, S K; Pan, Y X; Pandit, Y; Panebratsev, Y; Pawlak, T; Pawlik, B; Pei, H; Perkins, C; Peryt, W; Pile, P; Planinic, M; Pluta, J; Poljak, N; Poniatowska, K; Porter, J; Poskanzer, A M; Pruthi, N K; Przybycien, M; Pujahari, P R; Putschke, J; Qiu, H; Quintero, A; Ramachandran, S; Raniwala, R; Raniwala, S; Ray, R L; Riley, C K; Ritter, H G; Roberts, J B; Rogachevskiy, O V; Romero, J L; Ross, J F; Roy, A; Ruan, L; Rusnak, J; Rusnakova, O; Sahoo, N R; Sahu, P K; Sakrejda, I; Salur, S; Sandweiss, J; Sangaline, E; Sarkar, A; Schambach, J; Scharenberg, R P; Schmah, A M; Schmidke, W B; Schmitz, N; Seger, J; Seyboth, P; Shah, N; Shahaliev, E; Shanmuganathan, P V; Shao, M; Sharma, B; Shen, W Q; Shi, S S; Shou, Q Y; Sichtermann, E P; Singaraju, R N; Skoby, M J; Smirnov, D; Smirnov, N; Solanki, D; Sorensen, P; Spinka, H M; Srivastava, B; Stanislaus, T D S; Stevens, J R; Stock, R; Strikhanov, M; Stringfellow, B; Sumbera, M; Sun, X; Sun, X M; Sun, Y; Sun, Z; Surrow, B; Svirida, D N; Symons, T J M; Szelezniak, M A; Takahashi, J; Tang, A H; Tang, Z; Tarnowsky, T; Thomas, J H; Timmins, A R; Tlusty, D; Tokarev, M; Trentalange, S; Tribble, R E; Tribedy, P; Trzeciak, B A; Tsai, O D; Turnau, J; Ullrich, T; Underwood, D G; Van Buren, G; van Nieuwenhuizen, G; Vandenbroucke, M; Vanfossen, J A; Varma, R; Vasconcelos, G M S; Vasiliev, A N; Vertesi, R; Videbæk, F; Viyogi, Y P; Vokal, S; Vossen, A; Wada, M; Wang, F; Wang, G; Wang, H; Wang, J S; Wang, X L; Wang, Y; Wang, Y; Webb, G; Webb, J C; Westfall, G D; Wieman, H; Wissink, S W; Witt, R; Wu, Y F; Xiao, Z; Xie, W; Xin, K; Xu, H; Xu, J; Xu, N; Xu, Q H; Xu, Y; Xu, Z; Yan, W; Yang, C; Yang, Y; Yang, Y; Ye, Z; Yepes, P; Yi, L; Yip, K; Yoo, I-K; Yu, N; Zawisza, Y; Zbroszczyk, H; Zha, W; Zhang, J B; Zhang, J L; Zhang, S; Zhang, X P; Zhang, Y; Zhang, Z P; Zhao, F; Zhao, J; Zhong, C; Zhu, X; Zhu, Y H; Zoulkarneeva, Y; Zyzak, M

2014-08-15

We report measurements of single- and double-spin asymmetries for W^{±} and Z/γ^{*} boson production in longitudinally polarized p+p collisions at sqrt[s]=510  GeV by the STAR experiment at RHIC. The asymmetries for W^{±} were measured as a function of the decay lepton pseudorapidity, which provides a theoretically clean probe of the proton's polarized quark distributions at the scale of the W mass. The results are compared to theoretical predictions, constrained by polarized deep inelastic scattering measurements, and show a preference for a sizable, positive up antiquark polarization in the range 0.05

Measurement of product rotational alignment in associative-ionization collisions between polarized Na(3p) atoms

International Nuclear Information System (INIS)

Wang, M.; de Vries, M.S.; Weiner, J.

1986-01-01

We have studied the effect of reactant Na(3p) polarization on the rotational angular momentum alignment of product Na 2 + ions arising from associative-ionization (AI) collisions. Our results show that sensitivity of the AI rate constant to initial atomic polarization persists even when all hyperfine states are populated with broadband (3 cm -1 ) pulsed laser excitation of Na( 2 P/sub 3/2/) and that the spatial distribution of product rotational angular momentum vectors is anisotropic. We discuss a qualitative description of the collision process consistent with our measurements which indicates that sigma-orbital symmetry is preferred to π-orbital symmetry as the colliding partners approach

Characterization of RbmD (glycosyltransferase in ribostamycin gene cluster) through neomycin production reconstituted from the engineered Streptomyces fradiae BS1.

Science.gov (United States)

Nepal, Keshav Kumar; Oh, Tae-Jin; Subba, Bimala; Yoo, Jin Cheol; Sohng, Jae Kyung

2009-01-31

Amino acid homology analysis predicted that rbmD, a putative glycosyltransferase from Streptomyces ribosidificus ATCC 21294, has the highest homology with neoD in neomycin biosynthesis. S. fradiae BS1, in which the production of neomycin was abolished, was generated by disruption of the neoD gene in the neomycin producer S. fradiae. The restoration of neomycin by self complementation suggested that there was no polar effect in the mutant. In addition, S. fradiae BS6 was created with complementation by rbmD in S. fradiae BS1, and secondary metabolite analysis by ESI/MS, LC/MS and MS/MS showed the restoration of neomycin production in S. fradiae BS6. These gene inactivation and complementation studies suggested that, like neoD, rbmD functions as a 2-N-acetlyglucosaminyltransferase and demonstrated the potential for the generation of novel aminoglycoside antibiotics using glycosyltransferases in vivo.

Undulator-Based Production of Polarized Positrons, A Proposal for the 50-GeV Beam in the FFTB

Energy Technology Data Exchange (ETDEWEB)

Alexander, G

2004-03-25

The full exploitation of the physics potential of future linear colliders such as the JLC, NLC, and TESLA will require the development of polarized positron beams. In the proposed scheme of Balakin and Mikhailichenko [1] a helical undulator is employed to generate photons of several MeV with circular polarization which are then converted in a relatively thin target to generate longitudinally polarized positrons. This experiment, E-166, proposes to test this scheme to determine whether such a technique can produce polarized positron beams of sufficient quality for use in future linear colliders. The experiment will install a meter-long, short-period, pulsed helical undulator in the Final Focus Test Beam (FFTB) at SLAC. A low-emittance 50-GeV electron beam passing through this undulator will generate circularly polarized photons with energies up to 10 MeV. These polarized photons are then converted to polarized positrons via pair production in thin targets. Titanium and tungsten targets, which are both candidates for use in linear colliders, will be tested. The experiment will measure the flux and polarization of the undulator photons, and the spectrum and polarization of the positrons produced in the conversion target, and compare the measurement results to simulations. Thus the proposed experiment directly tests for the first time the validity of the simulation programs used for the physics of polarized pair production in finite matter, in particular the effects of multiple scattering on polarization. Successful comparison of the experimental results to the simulations will lead to greater confidence in the proposed designs of polarized positrons sources for the next generation of linear colliders. This experiment requests six-weeks of time in the FFTB beam line: three weeks for installation and setup and three weeks of beam for data taking. A 50-GeV beam with about twice the SLC emittance at a repetition rate of 30 Hz is required.

Undulator-Based Production of Polarized Positrons, A Proposal for the 50-GeV Beam in the FFTB

Energy Technology Data Exchange (ETDEWEB)

G. Alexander; P. Anthony; V. Bharadwaj; Yu.K. Batygin; T. Behnke; S. Berridge; G.R. Bower; W. Bugg; R. Carr; E. Chudakov; J.E. Clendenin; F.J. Decker; Yu. Efremenko; T. Fieguth; K. Flottmann; M. Fukuda; V. Gharibyan; T. Handler; T. Hirose; R.H. Iverson; Yu. Kamyshkov; H. Kolanoski; T. Lohse; Chang-guo Lu; K.T. McDonald; N. Meyners; R. Michaels; A.A. Mikhailichenko; K. Monig; G. Moortgat-Pick; M. Olson; T. Omori; D. Onoprienko; N. Pavel; R. Pitthan; M. Purohit; L. Rinolfi; K.P. Schuler; J.C. Sheppard; S. Spanier; A. Stahl; Z.M. Szalata; J. Turner; D. Walz; A. Weidemann; J. Weisend

2003-06-01

The full exploitation of the physics potential of future linear colliders such as the JLC, NLC, and TESLA will require the development of polarized positron beams. In the proposed scheme of Balakin and Mikhailichenko [1] a helical undulator is employed to generate photons of several MeV with circular polarization which are then converted in a relatively thin target to generate longitudinally polarized positrons. This experiment, E-166, proposes to test this scheme to determine whether such a technique can produce polarized positron beams of sufficient quality for use in future linear colliders. The experiment will install a meter-long, short-period, pulsed helical undulator in the Final Focus Test Beam (FFTB) at SLAC. A low-emittance 50-GeV electron beam passing through this undulator will generate circularly polarized photons with energies up to 10 MeV. These polarized photons are then converted to polarized positrons via pair production in thin targets. Titanium and tungsten targets, which are both candidates for use in linear colliders, will be tested. The experiment will measure the flux and polarization of the undulator photons, and the spectrum and polarization of the positrons produced in the conversion target, and compare the measurement results to simulations. Thus the proposed experiment directly tests for the first time the validity of the simulation programs used for the physics of polarized pair production in finite matter, in particular the effects of multiple scattering on polarization. Successful comparison of the experimental results to the simulations will lead to greater confidence in the proposed designs of polarized positrons sources for the next generation of linear colliders. This experiment requests six-weeks of time in the FFTB beam line: three weeks for installation and setup and three weeks of beam for data taking. A 50-GeV beam with about twice the SLC emittance at a repetition rate of 30 Hz is required.

Simultaneous production of spin-polarized ions/electrons based on two-photon ionization of laser-ablated metallic atoms

International Nuclear Information System (INIS)

Nakajima, Takashi; Yonekura, Nobuaki; Matsuo, Yukari; Kobayashi, Tohru; Fukuyama, Yoshimitsu

2003-01-01

We demonstrate the simultaneous production of spin-polarized ions/electrons using two-color, two-photon ionization of laser-ablated metallic atoms. Specifically, we have applied the developed technique to laser-ablated Sr atoms, and found that the electron-spin polarization of Sr + ions, and accordingly, the spin polarization of photoelectrons is 64%±9%, which is in good agreement with the theoretical prediction we have recently reported [T. Nakajima and N. Yonekura, J. Chem. Phys. 117, 2112 (2002)]. Our experimental results open up a simple way toward the construction of a spin-polarized dual ion/electron source

Revealing gene action for production characteristics by inbreeding ...

African Journals Online (AJOL)

Revealing gene action for production characteristics by inbreeding, based on a long-term selection ... The gene action involved in the expression of production characters was investigated, using the effect of the theoretical inbreeding ..... and predicted selection responses for growth, fat and lean traits in mice. J. Anim. Sci.

CELSR2, encoding a planar cell polarity protein, is a putative gene in Joubert syndrome with cortical heterotopia, microophthalmia, and growth hormone deficiency.

Science.gov (United States)

Vilboux, Thierry; Malicdan, May Christine V; Roney, Joseph C; Cullinane, Andrew R; Stephen, Joshi; Yildirimli, Deniz; Bryant, Joy; Fischer, Roxanne; Vemulapalli, Meghana; Mullikin, James C; Steinbach, Peter J; Gahl, William A; Gunay-Aygun, Meral

2017-03-01

Joubert syndrome is a ciliopathy characterized by a specific constellation of central nervous system malformations that result in the pathognomonic "molar tooth sign" on imaging. More than 27 genes are associated with Joubert syndrome, but some patients do not have mutations in any of these genes. Celsr1, Celsr2, and Celsr3 are the mammalian orthologues of the drosophila planar cell polarity protein, flamingo; they play important roles in neural development, including axon guidance, neuronal migration, and cilium polarity. Here, we report bi-allelic mutations in CELSR2 in a Joubert patient with cortical heterotopia, microophthalmia, and growth hormone deficiency. © 2017 Wiley Periodicals, Inc. © 2017 Wiley Periodicals, Inc.

Production of charm and beauty in e+e- with polarized electron beam

International Nuclear Information System (INIS)

Su, D.

1995-09-01

The test of the Standard Model through the measurements of Z 0 to fermion couplings can benefit from much enhanced sensitivity by using longitudinally polarized electron beams. This report reviews preliminary electroweak measurements from SLD on heavy quark production at the Z 0 , using 150,000 hadronic Z 0 decays accumulated during the 93-95 runs with high electron beam polarization. The parity violating parameters A b and A c of the Zbb and Zcc couplings are measured directly from the left-right forward-backward asymmetries. A measurement of R b with a lifetime double tag and a summary of the preliminary measurement of A LR from the 93-95 SLD data are also included in this report

Polarized 3 parton production in inclusive DIS at small x

Energy Technology Data Exchange (ETDEWEB)

Ayala, Alejandro [Instituto de Ciencias Nucleares, Universidad Nacional Autónoma de México, Apartado Postal 70-543, Ciudad de México 04510 (Mexico); Centre for Theoretical and Mathematical Physics, and Department of Physics, University of Cape Town, Rondebosch 7700 (South Africa); Hentschinski, Martin, E-mail: hentschinski@correo.nucleares.unam.mx [Instituto de Ciencias Nucleares, Universidad Nacional Autónoma de México, Apartado Postal 70-543, Ciudad de México 04510 (Mexico); Facultad de Ciencias Físico Matemáticas, Benemérita Universidad Autónoma de Puebla, Puebla 1152 (Mexico); Jalilian-Marian, Jamal [Department of Natural Sciences, Baruch College, CUNY, 17 Lexington Avenue, New York, NY 10010 (United States); CUNY Graduate Center, 365 Fifth Avenue, New York, NY 10016 (United States); Tejeda-Yeomans, Maria Elena [Departamento de Física, Universidad de Sonora, Boulevard Luis Encinas J. y Rosales, Colonia Centro, Hermosillo, Sonora 83000 (Mexico)

2016-10-10

Azimuthal angular correlations between produced hadrons/jets in high energy collisions are a sensitive probe of the dynamics of QCD at small x. Here we derive the triple differential cross section for inclusive production of 3 polarized partons in DIS at small x. The target proton or nucleus is described using the Color Glass Condensate (CGC) formalism. The resulting expressions are used to study azimuthal angular correlations between produced partons in order to probe the gluon structure of the target hadron or nucleus. Our analytic expressions can also be used to calculate the real part of the Next to Leading Order (NLO) corrections to di-hadron production in DIS by integrating out one of the three final state partons.

Polarized 3 parton production in inclusive DIS at small x

International Nuclear Information System (INIS)

Ayala, Alejandro; Hentschinski, Martin; Jalilian-Marian, Jamal; Tejeda-Yeomans, Maria Elena

2016-01-01

Azimuthal angular correlations between produced hadrons/jets in high energy collisions are a sensitive probe of the dynamics of QCD at small x. Here we derive the triple differential cross section for inclusive production of 3 polarized partons in DIS at small x. The target proton or nucleus is described using the Color Glass Condensate (CGC) formalism. The resulting expressions are used to study azimuthal angular correlations between produced partons in order to probe the gluon structure of the target hadron or nucleus. Our analytic expressions can also be used to calculate the real part of the Next to Leading Order (NLO) corrections to di-hadron production in DIS by integrating out one of the three final state partons.

Genetic modification of adeno-associated viral vector type 2 capsid enhances gene transfer efficiency in polarized human airway epithelial cells.

Science.gov (United States)

White, April F; Mazur, Marina; Sorscher, Eric J; Zinn, Kurt R; Ponnazhagan, Selvarangan

2008-12-01

Cystic fibrosis (CF) is a common genetic disease characterized by defects in the expression of the CF transmembrane conductance regulator (CFTR) gene. Gene therapy offers better hope for the treatment of CF. Adeno-associated viral (AAV) vectors are capable of stable expression with low immunogenicity. Despite their potential in CF gene therapy, gene transfer efficiency by AAV is limited because of pathophysiological barriers in these patients. Although a few AAV serotypes have shown better transduction compared with the AAV2-based vectors, gene transfer efficiency in human airway epithelium has still not reached therapeutic levels. To engineer better AAV vectors for enhanced gene delivery in human airway epithelium, we developed and characterized mutant AAV vectors by genetic capsid modification, modeling the well-characterized AAV2 serotype. We genetically incorporated putative high-affinity peptide ligands to human airway epithelium on the GH loop region of AAV2 capsid protein. Six independent mutant AAV were constructed, containing peptide ligands previously reported to bind with high affinity for known and unknown receptors on human airway epithelial cells. The vectors were tested on nonairway cells and nonpolarized and polarized human airway epithelial cells for enhanced infectivity. One of the mutant vectors, with the peptide sequence THALWHT, not only showed the highest transduction in undifferentiated human airway epithelial cells but also indicated significant transduction in polarized cells. Interestingly, this modified vector was also able to infect cells independently of the heparan sulfate proteoglycan receptor. Incorporation of this ligand on other AAV serotypes, which have shown improved gene transfer efficiency in the human airway epithelium, may enhance the application of AAV vectors in CF gene therapy.

Techniques of production and analysis of polarized synchrotron radiation

International Nuclear Information System (INIS)

Mills, D.M.

1992-01-01

The use of the unique polarization properties of synchrotron radiation in the hard x-ray spectral region (E>3 KeV) is becoming increasingly important to many synchrotron radiation researchers. The radiation emitted from bending magnets and conventional (planar) insertion devices (IDs) is highly linearly polarized in the plane of the particle's orbit. Elliptically polarized x-rays can also be obtained by going off axis on a bending magnet source, albeit with considerable loss of flux. The polarization properties of synchrotron radiation can be further tailored to the researcher's specific needs through the use of specialized insertion devices such as helical and crossed undulators and asymmetrical wigglers. Even with the possibility of producing a specific polarization, there is still the need to develop x-ray optical components which can manipulate the polarization for both analysis and further modification of the polarization state. A survey of techniques for producing and analyzing both linear and circular polarized x-rays will be presented with emphasis on those techniques which rely on single crystal optical components

Rhinovirus infection induces distinct transcriptome profiles in polarized human macrophages.

Science.gov (United States)

Rajput, Charu; Walsh, Megan P; Eder, Breanna N; Metitiri, Ediri E; Popova, Antonia P; Hershenson, Marc B

2018-05-01

Infections with rhinovirus (RV) cause asthma exacerbations. Recent studies suggest that macrophages play a role in asthmatic airway inflammation and the innate immune response to RV infection. Macrophages exhibit phenotypes based on surface markers and gene expression. We hypothesized that macrophage polarization state alters gene expression in response to RV infection. Cells were derived from human peripheral blood derived monocytes. M1 and M2 polarization was carried out by using IFN-γ and IL-4, respectively, and RNA was extracted for Affymetrix Human Gene ST2.1 exon arrays. Selected genes were validated by quantitative (q)PCR. Treatment of nonactivated (M0) macrophages with IFN-γ and IL-4 induced the expression of 252 and 153 distinct genes, respectively, including previously-identified M1 and M2 markers. RV infection of M0 macrophages induced upregulation of 232 genes; pathway analysis showed significant overrepresentation of genes involved in IFN-α/β signaling and cytokine signaling in the immune system. RV infection induced differential expression of 195 distinct genes in M1-like macrophages but only seven distinct genes in M2-like-polarized cells. In a secondary analysis, comparison between M0-, RV-infected, and M1-like-polarized, RV-infected macrophages revealed differential expression of 227 genes including those associated with asthma and its exacerbation. qPCR demonstrated increased expression of CCL8, CXCL10, TNFSF10, TNFSF18, IL6, NOD2, and GSDMD and reduced expression of VNN1, AGO1, and AGO2. Together, these data show that, in contrast to M2-like-polarized macrophages, gene expression of M1-like macrophages is highly regulated by RV.

Construction and testing of a source for the production of polarized heavy ions at the Heidelberg MP tandem

International Nuclear Information System (INIS)

Kraemer, H.D.

1983-01-01

At the Heidelberg MP tandem a source for the production of nuclear-spin polarized lithium and sodium ions was constructed. The ion source works according to the atomic beam principle. By a furnace a thermal atomic beam is produced the electron shell of which is polarized in a quadrupole magnet. This beam passes then three high frequency passages in which by exchange of suitable hyperfine structure levels the nuclear spin is partly polarized. The atoms are ionized on a hot tungsten surface and transcharged in cesium vapour to negative ions. The alignment of the spin in the desired spatial direction is rendered possible by means of a Wien filter rotable around the beam axis. For the beam transport until the accelerator exclusively electrostatic lenses and deviation elements are used. For the checking of the function modus of the different source parts the polarization of the atomic beam and low energy ion beams was studied. The polarization of the accelerated sup(7->)Li beam was measured by the reaction 1 H(sup(7->)Li, α) 4 He at Esub(Li) = 44 MeV. The tensor polarization was determined to Psub(zz) = 0.35 +- 0.01. The polarization of odd stages was determined to >= 80% of the theoretically reachable values. For a tensor polarized 23 Na 9+ beam accelerated to 110 MeV could be shown that during the acceleration 50% of the polarization remains conserved. With this at the first time a powerful source for the production of polarized Na beams of an accelerator is available which permits nuclear physics studies inthe energy range Esub(Na) [de

The YABBY Genes of Leaf and Leaf-Like Organ Polarity in Leafless Plant Monotropa hypopitys

Directory of Open Access Journals (Sweden)

Anna V. Shchennikova

2018-01-01

Full Text Available Monotropa hypopitys is a mycoheterotrophic, nonphotosynthetic plant acquiring nutrients from the roots of autotrophic trees through mycorrhizal symbiosis, and, similar to other extant plants, forming asymmetrical lateral organs during development. The members of the YABBY family of transcription factors are important players in the establishment of leaf and leaf-like organ polarity in plants. This is the first report on the identification of YABBY genes in a mycoheterotrophic plant devoid of aboveground vegetative organs. Seven M. hypopitys YABBY members were identified and classified into four clades. By structural analysis of putative encoded proteins, we confirmed the presence of YABBY-defining conserved domains and identified novel clade-specific motifs. Transcriptomic and qRT-PCR analyses of different tissues revealed MhyYABBY transcriptional patterns, which were similar to those of orthologous YABBY genes from other angiosperms. These data should contribute to the understanding of the role of the YABBY genes in the regulation of developmental and physiological processes in achlorophyllous leafless plants.

Integrating Ontological Knowledge and Textual Evidence in Estimating Gene and Gene Product Similarity

Energy Technology Data Exchange (ETDEWEB)

Sanfilippo, Antonio P.; Posse, Christian; Gopalan, Banu; Tratz, Stephen C.; Gregory, Michelle L.

2006-06-08

With the rising influence of the Gene On-tology, new approaches have emerged where the similarity between genes or gene products is obtained by comparing Gene Ontology code annotations associ-ated with them. So far, these approaches have solely relied on the knowledge en-coded in the Gene Ontology and the gene annotations associated with the Gene On-tology database. The goal of this paper is to demonstrate that improvements to these approaches can be obtained by integrating textual evidence extracted from relevant biomedical literature.

Measurement of Spin Observables in Inclusive Lambda and Neutral Kaon (short) Production with a 200 GEV Polarized Proton Beam.

Science.gov (United States)

Bravar, Alessandro

The considerable polarization of hyperons produced at high x_ F has been known for a long time and has been interpreted in various theoretical models in terms of the constituents' spin. The spin dependence in inclusive Lambda and K _sp{s}{circ} production has been studied for the first time at high energy using the Fermilab 200 GeV/c polarized proton beam and a large forward spectrometer. The spin observables analyzing power A_ N, polarization P_0 and depolarization D _{NN} in inclusive Lambda production has been measured in the kinematic range of rm 0.2current picture of spin effects in hadronic interactions is much more complex than naively thought. The data on the spin dependence of the Lambda inclusive production indicate a substantial negative asymmetry A_ N at large x _ F and moderate p_ T, the polarization results P_0 are in fair agreement with previous measurements, and the double spin parameter D_ {NN} increases with x_ F and p_ T to relatively large positive values. The trend of the Lambda A_ N, which shows a kinematical behavior similar to P_0 with same sign but smaller in magnitude, might be suggestive of a common interpretation. These results, however, are difficult to accommodate within the present quark fragmentation models for hyperon polarization, based on SU(6) wave functions where the produced strange quark carries all the spin information of the Lambda, unless spectator di-quarks in the recombination process play a more significant role than generally expected. These results can further test the current ideas on the underlying mechanisms for the hyperon polarization and meson production asymmetry.

Expression of cocoa genes in Saccharomyces cerevisiae improves cocoa butter production

DEFF Research Database (Denmark)

Wei, Yongjun; Bergenholm, David; Gossing, Michael

2018-01-01

Background: Cocoa butter (CB) extracted from cocoa beans (Theobroma cacao) is the main raw material for chocolate production, but CB supply is insufficient due to the increased chocolate demand and limited CB production. CB is mainly composed of three different kinds of triacylglycerols (TAGs), 1......), and it is essential to modulate the yeast TAG biosynthetic pathway for higher CBL production.Results: We cloned seven GPAT genes and three LPAT genes from cocoa cDNA, in order to screen for CBL biosynthetic gene candidates. By expressing these cloned cocoa genes and two synthesized cocoa DGAT genes in S. cerevisiae......, we successfully increased total fatty acid production, TAG production and CBL production in some of the strains. In the best producer, the potential CBL content was eightfold higher than the control strain, suggesting the cocoa genes expressed in this strain were functional and might be responsible...

Polarized 3 parton production in inclusive DIS at small x

Directory of Open Access Journals (Sweden)

Alejandro Ayala

2016-10-01

Full Text Available Azimuthal angular correlations between produced hadrons/jets in high energy collisions are a sensitive probe of the dynamics of QCD at small x. Here we derive the triple differential cross section for inclusive production of 3 polarized partons in DIS at small x. The target proton or nucleus is described using the Color Glass Condensate (CGC formalism. The resulting expressions are used to study azimuthal angular correlations between produced partons in order to probe the gluon structure of the target hadron or nucleus. Our analytic expressions can also be used to calculate the real part of the Next to Leading Order (NLO corrections to di-hadron production in DIS by integrating out one of the three final state partons.

Comparison of full-sky polarization and radiance observations to radiative transfer simulations which employ AERONET products.

Science.gov (United States)

Pust, Nathan J; Dahlberg, Andrew R; Thomas, Michael J; Shaw, Joseph A

2011-09-12

Visible-band and near infrared polarization and radiance images measured with a ground-based full-sky polarimeter are compared against a successive orders of scattering (SOS) radiative transfer model for 2009 summer cloud-free days in Bozeman, Montana, USA. The polarimeter measures radiance and polarization in 10-nm bands centered at 450 nm, 490 nm, 530 nm, 630 nm, and 700 nm. AERONET products are used to represent aerosols in the SOS model, while MISR satellite BRF products are used for the surface reflectance. While model results generally agree well with observation, the simulated degree of polarization is typically higher than observed data. Potential sources of this difference may include cloud contamination and/or underestimation of the AERONET-retrieved aerosol real refractive index. Problems with the retrieved parameters are not unexpected given the low aerosol optical depth range (0.025 to 0.17 at 500 nm) during the study and the corresponding difficulties that these conditions pose to the AERONET inversion algorithm.

FNDC5 attenuates adipose tissue inflammation and insulin resistance via AMPK-mediated macrophage polarization in obesity.

Science.gov (United States)

Xiong, Xiao-Qing; Geng, Zhi; Zhou, Bing; Zhang, Feng; Han, Ying; Zhou, Ye-Bo; Wang, Jue-Jin; Gao, Xing-Ya; Chen, Qi; Li, Yue-Hua; Kang, Yu-Ming; Zhu, Guo-Qing

2018-06-01

Obesity-induced chronic inflammation is critical in the pathogenesis of insulin resistance, and the recruitment and proinflammatory activation of adipose tissue macrophages (ATMs) is important for the development of this process. Here, we examined the effects of fibronectin type III domain-containing 5 (FNDC5) on inflammation and insulin resistance in high-fat diet-induced obese mice. Male wild-type (WT) and FNDC5 -/- mice were fed with standard chow (Ctrl) or high fat diet (HFD) for 20 weeks to induce obesity and insulin resistance. Firstly, effects of FNDC5 gene deletion on obesity, insulin resistance, macrophage accumulation and polarization and adipose tissue inflammation were determined in mice. Secondly, the macrophage polarity shift was further examined with flow cytometry in isolated stromal vascular fraction (SVF). Thirdly, the effects of exogenous FNDC5 on lipopolysaccharide (LPS)-induced macrophage polarization, inflammation and the underlying signaling mechanism were investigated in RAW264.7 macrophages and primary mouse peritoneal cavity macrophages (PMs). Finally, the therapeutic effects of FNDC5 overexpression were examined in HFD-induced obese WT and FNDC5 -/- mice. FNDC5 gene deletion aggravated obesity, insulin resistance, fat accumulation and inflammation accompanied with enhanced AMPK inhibition, macrophages recruitment and M1 polarization in mice fed with HFD. Exogenous FNDC5 inhibited LPS-induced M1 macrophage polarization and inflammatory cytokine production via AMPK phosphorylation in both RAW264.7 macrophages and PMs. FNDC5 overexpression attenuated insulin resistance, AMPK inhibition, M1 macrophage polarization and inflammatory cytokine production in adipose tissue of obese WT and FNDC5 -/- mice. FNDC5 attenuates adipose tissue inflammation and insulin resistance via AMPK-mediated macrophage polarization in HFD-induced obesity. FNDC5 plays several beneficial roles in obesity and may be used as a therapeutic regimen for preventing

MiR-146a modulates macrophage polarization by inhibiting Notch1 pathway in RAW264.7 macrophages.

Science.gov (United States)

Huang, Cheng; Liu, Xue-Jiao; QunZhou; Xie, Juan; Ma, Tao-Tao; Meng, Xiao-Ming; Li, Jun

2016-03-01

Macrophages are heterogeneous and plastic cells which are able to undergo dynamic transition between M1 and M2 polarized phenotypes in response to the microenvironment signals. However, the underlying molecular mechanisms of macrophage polarization are still obscure. In the current study, it was revealed that miR-146a might play a pivotal role in macrophage polarization. As our results indicated, miR-146a was highly expressed in M2 macrophages rather than M1 macrophages. Over-expression of miR-146a resulted in significantly decreased production of pro-inflammatory cytokines including iNOS and TNF-α in M1 macrophages, while increased production of M2 marker genes such as Arg1 and CD206 in M2 macrophages. In contrast, knockdown of miR-146a promoted M1 macrophage polarization but diminished M2 macrophage polarization. Mechanistically, it was revealed that miR-146a modulated macrophage polarization by targeting Notch1. Of note, PPARγ was responsible as another target for miR-146a-mediated macrophage polarization. Taken together, it was suggested that miR-146a might serve as a molecular regulator in macrophage polarization and is a potential therapeutic target for inflammatory diseases. Copyright © 2016 Elsevier B.V. All rights reserved.

Measurement of leptonic asymmetries and top quark polarization in ttˉ production

Czech Academy of Sciences Publication Activity Database

Abazov, V. M.; Abbott, B.; Acharya, B.S.; Kupčo, Alexander; Lokajíček, Miloš

2013-01-01

Roč. 87, č. 1 (2013), "011103-1"-"011103-8" ISSN 1550-7998 R&D Projects: GA MŠk(CZ) LG12006 Institutional support: RVO:68378271 Keywords : D0 * Fermilab * polarization * top * pair production * angular distribution * asymmetry * anti-p p * interaction * dilepton * final state * ((n)jet lepton Subject RIV: BG - Nuclear, Atomic and Molecular Physics, Colliders Impact factor: 4.864, year: 2013

Genetic control of organ shape and tissue polarity.

Directory of Open Access Journals (Sweden)

Amelia A Green

2010-11-01

Full Text Available The mechanisms by which genes control organ shape are poorly understood. In principle, genes may control shape by modifying local rates and/or orientations of deformation. Distinguishing between these possibilities has been difficult because of interactions between patterns, orientations, and mechanical constraints during growth. Here we show how a combination of growth analysis, molecular genetics, and modelling can be used to dissect the factors contributing to shape. Using the Snapdragon (Antirrhinum flower as an example, we show how shape development reflects local rates and orientations of tissue growth that vary spatially and temporally to form a dynamic growth field. This growth field is under the control of several dorsoventral genes that influence flower shape. The action of these genes can be modelled by assuming they modulate specified growth rates parallel or perpendicular to local orientations, established by a few key organisers of tissue polarity. Models in which dorsoventral genes only influence specified growth rates do not fully account for the observed growth fields and shapes. However, the data can be readily explained by a model in which dorsoventral genes also modify organisers of tissue polarity. In particular, genetic control of tissue polarity organisers at ventral petal junctions and distal boundaries allows both the shape and growth field of the flower to be accounted for in wild type and mutants. The results suggest that genetic control of tissue polarity organisers has played a key role in the development and evolution of shape.

Impact of gluon polarization on Higgs boson plus jet production at the LHC

NARCIS (Netherlands)

Boer, Daniel; Pisano, Cristian

2015-01-01

In this paper we consider Higgs boson plus jet production as a process that is sensitive to the linear polarization of gluons inside the unpolarized protons of the LHC. The leading order expressions for the transverse momentum distribution of the Higgs boson plus jet pair are provided in terms of

Identification of potentially hazardous human gene products in GMO risk assessment.

Science.gov (United States)

Bergmans, Hans; Logie, Colin; Van Maanen, Kees; Hermsen, Harm; Meredyth, Michelle; Van Der Vlugt, Cécile

2008-01-01

Genetically modified organisms (GMOs), e.g. viral vectors, could threaten the environment if by their release they spread hazardous gene products. Even in contained use, to prevent adverse consequences, viral vectors carrying genes from mammals or humans should be especially scrutinized as to whether gene products that they synthesize could be hazardous in their new context. Examples of such potentially hazardous gene products (PHGPs) are: protein toxins, products of dominant alleles that have a role in hereditary diseases, gene products and sequences involved in genome rearrangements, gene products involved in immunomodulation or with an endocrine function, gene products involved in apoptosis, activated proto-oncogenes. For contained use of a GMO that carries a construct encoding a PHGP, the precautionary principle dictates that safety measures should be applied on a "worst case" basis, until the risks of the specific case have been assessed. The potential hazard of cloned genes can be estimated before empirical data on the actual GMO become available. Preliminary data may be used to focus hazard identification and risk assessment. Both predictive and empirical data may also help to identify what further information is needed to assess the risk of the GMO. A two-step approach, whereby a PHGP is evaluated for its conceptual dangers, then checked by data bank searches, is delineated here.

A two-cassette reporter system for assessing target gene translation and target gene product inclusion body formation

DEFF Research Database (Denmark)

2016-01-01

The present invention relates to a dual cassette reporter system capable of assessing target gene translation and target gene product folding. The present invention further relates to vectors and host cells comprising the dual cassette reporter system. In addition the invention relates to the use...... of the dual cassette reporter system for assessing target gene translation and target gene product folding....

Polarization effects in the reaction of charm baryon production on colliding electron-positron beams

International Nuclear Information System (INIS)

Rekalo, M.P.; Korzh, A.P.; Barannik, V.P.

1980-01-01

To calculate energy and angular distributions of various decay products of charm baAyons, which are prodUced in reactions on colliding e + e - beams, it is necessary to know the differential cross sections of the e + e - → C+anti C process which correspond to different polarized states of produced C and anti C (C - charm baryon). These differential cross sections are calculated for a single-photon mechanism with respect to the contribution of the anapole and electric dipole form factors of C-baryon. Polarizations of colliding electron-positron beams are taken into account in a full volume

J/ψ production in polarized and unpolarized ep collision and Sivers and cos 2φ asymmetries

Energy Technology Data Exchange (ETDEWEB)

Mukherjee, Asmita; Rajesh, Sangem [Indian Institute of Technology Bombay, Department of Physics, Mumbai (India)

2017-12-15

We calculate the Sivers and cos 2φ azimuthal asymmetries in J/ψ production in the polarized and unpolarized semi-inclusive ep collision, respectively, using the formalism based on the transverse momentum-dependent parton distributions (TMDs). The non-relativistic QCD-based color octet model is employed in calculating the J/ψ production rate. The Sivers asymmetry in this process directly probes the gluon Sivers function. The estimated Sivers asymmetry at z = 1 is negative, which is in good agreement with the COMPASS data. The effect of TMD evolution on the Sivers asymmetry is also investigated. The cos 2φ asymmetry is sizable and probes the linearly polarized gluon distribution in an unpolarized proton. (orig.)

Large-xF spin asymmetry in π0 production by 200-GeV polarized protons

International Nuclear Information System (INIS)

Adams, D.L.; Corcoran, M.D.; Cranshaw, J.; Nessi-Tedaldi, F.; Nessi, M.; Nguyen, C.; Roberts, J.B.; Skeens, J.; White, J.L.; Bystricky, J.; Lehar, F.; Lesquen, A. de; Cossairt, J.D.; Read, A.L.; En'yo, H.; Funahashi, H.; Goto, Y.; Imai, K.; Itow, Y.; Makino, S.; Masaike, A.; Miyake, K.; Nagamine, T.; Saito, N.; Yamashita, S.; Iwatani, K.; Krueger, K.W.; Kuroda, K.; Michalowicz, A.; Luehring, F.C.; Miller, D.H.; Pauletta, G.; Penzo, A.; Schiavon, P.; Zanetti, A.; Salvato, G.; Villari, A.; Takeutchi, F.; Tamura, N.; Tanaka, N.; Yoshida, T.

1992-01-01

The spin asymmetry A N for inclusive π 0 production by 200-GeV transversely-polarized protons on a liquid hydrogen target has been measured at Fermilab over a wide range of x F , with 0.5 T F >0.3, the asymmetry rises with increasing x F and reaches a value of A N =0.15±0.03 in the region 0.6 F <0.8. This result provides new input regarding the question of the internal spin structure of transversely-polarized protons. (orig.)

Heme and non-heme iron transporters in non-polarized and polarized cells

Directory of Open Access Journals (Sweden)

Yasui Yumiko

2010-06-01

Full Text Available Abstract Background Heme and non-heme iron from diet, and recycled iron from hemoglobin are important products of the synthesis of iron-containing molecules. In excess, iron is potentially toxic because it can produce reactive oxygen species through the Fenton reaction. Humans can absorb, transport, store, and recycle iron without an excretory system to remove excess iron. Two candidate heme transporters and two iron transporters have been reported thus far. Heme incorporated into cells is degraded by heme oxygenases (HOs, and the iron product is reutilized by the body. To specify the processes of heme uptake and degradation, and the reutilization of iron, we determined the subcellular localizations of these transporters and HOs. Results In this study, we analyzed the subcellular localizations of 2 isoenzymes of HOs, 4 isoforms of divalent metal transporter 1 (DMT1, and 2 candidate heme transporters--heme carrier protein 1 (HCP1 and heme responsive gene-1 (HRG-1--in non-polarized and polarized cells. In non-polarized cells, HCP1, HRG-1, and DMT1A-I are located in the plasma membrane. In polarized cells, they show distinct localizations: HCP1 and DMT1A-I are located in the apical membrane, whereas HRG-1 is located in the basolateral membrane and lysosome. 16Leu at DMT1A-I N-terminal cytosolic domain was found to be crucial for plasma membrane localization. HOs are located in smooth endoplasmic reticulum and colocalize with NADPH-cytochrome P450 reductase. Conclusions HCP1 and DMT1A-I are localized to the apical membrane, and HRG-1 to the basolateral membrane and lysosome. These findings suggest that HCP1 and DMT1A-I have functions in the uptake of dietary heme and non-heme iron. HRG-1 can transport endocytosed heme from the lysosome into the cytosol. These localization studies support a model in which cytosolic heme can be degraded by HOs, and the resulting iron is exported into tissue fluids via the iron transporter ferroportin 1, which is

Polarized atomic beams for targets

International Nuclear Information System (INIS)

Grueebler, W.

1984-01-01

The basic principle of the production of polarized atomic hydrogen and deuterium beams are reviewed. The status of the present available polarization, density and intensity are presented. The improvement of atomic beam density by cooling the hydrogen atoms to low velocity is discussed. The possible use of polarized atomic beams as targets in storage rings is shown. It is proposed that polarized atomic beams can be used to produce polarized gas targets with high polarization and greatly improved density

Production of φ-mesons in N-barN annihilation and polarized strangeness in the nucleon

International Nuclear Information System (INIS)

Sapozhnikov, M.G.

1995-01-01

Recent results from the experiments on φ-meson production in annihilation of stopped antiprotons have demonstrated significant (by a factor of 30-50) violation of the OZI rule. Experimental information on φ-meson production is discussed and possible theoretical explanations of the strong OZI rule violation as a manifestation of polarized intrinsic nucleon strangeness are reviewed. 70 refs., 6 figs., 2 tabs

Non-Polar Natural Products from Bromelia laciniosa, Neoglaziovia variegata and Encholirium spectabile (Bromeliaceae

Directory of Open Access Journals (Sweden)

Ole Johan Juvik

2017-09-01

Full Text Available Extensive regional droughts are already a major problem on all inhabited continents and severe regional droughts are expected to become an increasing and extended problem in the future. Consequently, extended use of available drought resistant food plants should be encouraged. Bromelia laciniosa, Neoglaziovia variegata and Encholirium spectabile are excellent candidates in that respect because they are established drought resistant edible plants from the semi-arid Caatinga region. From a food safety perspective, increased utilization of these plants would necessitate detailed knowledge about their chemical constituents. However, their chemical compositions have previously not been determined. For the first time, the non-polar constituents of B. laciniosa, N. variegata and E. spectabile have been identified. This is the first thorough report on natural products from N. variegata, E. spectabile, and B. laciniosa. Altogether, 20 non-polar natural products were characterized. The identifications were based on hyphenated gas chromatography-high resolution mass spectrometry (GC-HRMS and supported by 1D and 2D Nuclear Magnetic Resonance (NMR plant metabolomics.

Genetic Variation and Divergence of Genes Involved in Leaf Adaxial-abaxial Polarity Establishment in Brassica rapa

Directory of Open Access Journals (Sweden)

Jianli eLiang

2016-02-01

Full Text Available Alterations in leaf adaxial–abaxial (ad-ab polarity are one of the main factors that are responsible for leaf curvature. In Chinese cabbage, to form a leafy head, leaf incurvature is an essential prerequisite. Identifying ad-ab patterning genes and investigating its genetic variations will facilitate in elucidating the mechanism underlying leaf incurvature during head formation. In the present study we conducted comparative genomic analysis of the identification of 45 leaf ad-ab patterning genes in Brassica rapa based on 26 homologs in Arabidopsis thaliana, indicating that these genes underwent expansion and were retained after whole genome triplication (WGT. We also assessed the nucleotide diversity and selection footprints of these 45 genes in a collection of 94 Brassica rapa accessions that were composed of heading and non-heading morphotypes. Six of the 45 genes showed significant negative Tajima’s D indices and nucleotide diversity reduction in heading accessions compared to that in non-heading accessions, indicating that these underwent purifying selection. Further testing of the BrARF3.1 gene, which was one of the selection signals from a larger collection, confirmed that purifying selection did occur. Our results provide genetic evidence that ad-ab patterning genes are involved in leaf incurvature that is associated in the formation of a leafy head, as well as promote an understanding of the genetic mechanism underlying leafy head formation in Chinese cabbage.

Electroproduction of polarized Λ's

International Nuclear Information System (INIS)

Kunne, R.A.

1992-01-01

Lambdas are a powerful tool to explore spin effects of QCD. The λ polarization is self analyzing, as it is measurable from the angular distribution of the decay products. Two applications of polarized electroproduced λ's are suggested: the measurement of λ polarization at large transverse momentum as a possible test of QCD and the measurement of transversely polarized parton distributions

Epstein-Barr Virus BKRF4 Gene Product Is Required for Efficient Progeny Production.

Science.gov (United States)

Masud, H M Abdullah Al; Watanabe, Takahiro; Yoshida, Masahiro; Sato, Yoshitaka; Goshima, Fumi; Kimura, Hiroshi; Murata, Takayuki

2017-12-01

Epstein-Barr virus (EBV), a member of human gammaherpesvirus, infects mainly B cells. EBV has two alternative life cycles, latent and lytic, and is reactivated occasionally from the latent stage to the lytic cycle. To combat EBV-associated disorders, understanding the molecular mechanisms of the EBV lytic replication cycle is also important. Here, we focused on an EBV lytic gene, BKRF4. Using our anti-BKRF4 antibody, we revealed that the BKRF4 gene product is expressed during the lytic cycle with late kinetics. To characterize the role of BKRF4, we constructed BKRF4-knockout mutants using the bacterial artificial chromosome (BAC) and CRISPR/Cas9 systems. Although disruption of the BKRF4 gene had almost no effect on viral protein expression and DNA synthesis, it significantly decreased progeny virion levels in HEK293 and Akata cells. Furthermore, we show that BKRF4 is involved not only in production of progeny virions but also in increasing the infectivity of the virus particles. Immunoprecipitation assays revealed that BKRF4 interacted with a virion protein, BGLF2. We showed that the C-terminal region of BKRF4 was critical for this interaction and for efficient progeny production. Immunofluorescence analysis revealed that BKRF4 partially colocalized with BGLF2 in the nucleus and perinuclear region. Finally, we showed that BKRF4 is a phosphorylated, possible tegument protein and that the EBV protein kinase BGLF4 may be important for this phosphorylation. Taken together, our data suggest that BKRF4 is involved in the production of infectious virions. IMPORTANCE Although the latent genes of EBV have been studied extensively, the lytic genes are less well characterized. This study focused on one such lytic gene, BKRF4, which is conserved only among gammaherpesviruses (ORF45 of Kaposi's sarcoma-associated herpesvirus or murine herpesvirus 68). After preparing the BKRF4 knockout virus using B95-8 EBV-BAC, we demonstrated that the BKRF4 gene was involved in infectious

Polarized coincidence electroproduction

International Nuclear Information System (INIS)

Heimann, R.L.

1975-03-01

A study is made of the inclusive electroproduction of single hadrons off a polarized target. Bjorken scaling laws and the hadron azimuthal distribution are derived from the quark parton model. The polarization asymmetries scale when the target spin is along the direction of the virtual photon, and (apart from significant exception) vanish for transverse spin. These results have a simple explanation; emphasis is given both to the general mathematical formalism and to intuitive physical reasoning. Through this framework other cases are considered: quarks with anomalous magnetic moment; renormalization group effects and asymptotic freedom; production of vector mesons (whose spin state is analysed by their decay); relation to large transverse momentum hadron production; and a covariant parton model calculation. Spin 0 partons and Regge singularities are also considered. All of these cases (apart from the last two) modify the pattern of conclusions. Vector meson production shows polarization enhancements in the density matrix element rhosub(0+); the renormalization group approach does not lead to any significant suppressions. They are also less severe in parton models for large Psub(T) hadrons, and are not supported by the covariantly formulated calculation. The origins of these differences are isolated and used to exemplify the sensitivity polarized hadron electroproduction has to delicate detail that is otherwise concealed. (author)

Twist-3 effect from the longitudinally polarized proton for ALT in hadron production from pp collisions

Directory of Open Access Journals (Sweden)

Yuji Koike

2016-08-01

Full Text Available We compute the contribution from the longitudinally polarized proton to the twist-3 double-spin asymmetry ALT in inclusive (light hadron production from proton–proton collisions, i.e., p↑p→→hX. We show that using the relevant QCD equation-of-motion relation and Lorentz invariance relation allows one to eliminate the twist-3 quark-gluon correlator (associated with the longitudinally polarized proton in favor of one-variable twist-3 quark distributions and the (twist-2 transversity parton density. Including this result with the twist-3 pieces associated with the transversely polarized proton and unpolarized final-state hadron (which have already been calculated in the literature, we now have the complete leading-order cross section for this process.

Polarization phenomena in heavy-ion reactions

International Nuclear Information System (INIS)

Sugimoto, K.; Ishihara, M.; Takahashi, N.

1984-01-01

This chapter presents a few key experiments which provide direct evidence of the polarization phenomena in heavy-ion reactions. The theory of polarization observables and measurements is given with the necessary formulae. The polarization phenomena is described and studies of product nuclear polarization in heavy-ion reactions are discussed. Studies of heavy-ion reactions induced by polarized beams are examined

Id-1 gene and gene products as therapeutic targets for treatment of breast cancer and other types of carcinoma

Science.gov (United States)

Desprez, Pierre-Yves; Campisi, Judith

2014-08-19

A method for treatment of breast cancer and other types of cancer. The method comprises targeting and modulating Id-1 gene expression, if any, for the Id-1 gene, or gene products in breast or other epithelial cancers in a patient by delivering products that modulate Id-1 gene expression. When expressed, Id-1 gene is a prognostic indicator that cancer cells are invasive and metastatic.

Chromosomal flhB1 gene of the alphaproteobacterium Azospirillum brasilense Sp245 is essential for correct assembly of both constitutive polar flagellum and inducible lateral flagella.

Science.gov (United States)

Filip'echeva, Yulia; Shelud'ko, Andrei; Prilipov, Alexei; Telesheva, Elizaveta; Mokeev, Dmitry; Burov, Andrei; Petrova, Lilia; Katsy, Elena

2018-03-01

Azospirillum brasilense has the ability of swimming and swarming motility owing to the work of a constitutive polar flagellum and inducible lateral flagella, respectively. The interplay between these flagellar systems is poorly understood. One of the key elements of the flagellar export apparatus is the protein FlhB. Two predicted flhB genes are present in the genome of A. brasilense Sp245 (accession nos. HE577327-HE577333). Experimental evidence obtained here indicates that the chromosomal coding sequence (CDS) AZOBR_150177 (flhB1) of Sp245 is essential for the production of both types of flagella. In an flhB1:: Omegon-Km mutant, Sp245.1063, defects in polar and lateral flagellar assembly and motility were complemented by expressing the wild-type flhB1 gene from plasmid pRK415. It was found that Sp245.1063 lost the capacity for slight but statistically significant decrease in mean cell length in response to transfer from solid to liquid media, and vice versa; in the complemented mutant, this capacity was restored. It was also shown that after the acquisition of the pRK415-harbored downstream CDS AZOBR_150176, cells of Sp245 and Sp245.1063 ceased to elongate on solid media. These initial data suggest that the AZOBR_150176-encoded putative multisensory hybrid sensor histidine kinase-response regulator, in concert with FlhB1, plays a role in morphological response of azospirilla to changes in the hardness of a milieu.

Transfection efficiency and uptake process of polyplexes in human lung endothelial cells: a comparative study in non-polarized and polarized cells.

Science.gov (United States)

Mennesson, Eric; Erbacher, Patrick; Piller, Véronique; Kieda, Claudine; Midoux, Patrick; Pichon, Chantal

2005-06-01

Following systemic administration, polyplexes must cross the endothelium barrier to deliver genes to the target cells underneath. To design an efficient gene delivery system into lung epithelium, we evaluated capture and transfection efficiencies of DNA complexed with either Jet-PEI (PEI-polyplexes) or histidylated polylysine (His-polyplexes) in human lung microvascular endothelial cells (HLMEC) and tracheal epithelial cells. After optimizing growth conditions to obtain a tight HLMEC monolayer, we characterized uptake of polyplexes by flow cytometry and evaluated their transfection efficiency. Polyplexes were formulated as small particles. YOYO-labelled plasmid fluorescence intensity and luciferase activity were used as readouts for uptake and gene expression, respectively. PEI-polyplexes were more efficiently taken up than His-polyplexes by both non-polarized (2-fold) and polarized HLMEC (10-fold). They were mainly internalized by a clathrin-dependent pathway whatever the cell state. In non-polarized cells, His-polyplexes entered also mainly via a clathrin-dependent pathway but with an involvement of cholesterol. The cell polarization decreased this way and a clathrin-independent pathway became predominant. PEI-polyplexes transfected more efficiently HLMEC than His-polyplexes (10(7) vs. 10(5) relative light units (RLU)/mg of proteins) with a more pronounced difference in polarized cells. In contrast, no negative effect of the cell polarization was observed with tracheal epithelial cells in which both polyplexes had comparable efficiency. We show that the efficiency of polyplex uptake by HLMEC and their internalization mechanism are polymer-dependent. By contrast with His-polyplexes, the HLMEC polarization has little influence on the uptake process and on the transfection efficiency of PEI-polyplexes. Copyright (c) 2005 John Wiley & Sons, Ltd.

Double-spin asymmetry of J/ψ production in polarized pp-collisions at HERA-N-vector polarized

International Nuclear Information System (INIS)

Teryaev, O.; Tkabladze, A.

1996-01-01

We calculated the color-octet contribution to the double spin asymmetry of J/ψ hadroproduction with nonzero transverse momenta at fixed target energies √ s ≅ 40 GeV. It is shown that color-octet contribution is dominant in the asymmetries. The expected asymmetries and statistical errors in a future option of HERA with longitudinally polarized protons at √ s = 39 GeV (HERA-N polarized) should allow one to distinguish between different parametrizations for polarized gluon distribution in proton

Hepatocyte polarization is essential for the productive entry of the hepatitis B virus.

Science.gov (United States)

Schulze, Andreas; Mills, Kerry; Weiss, Thomas S; Urban, Stephan

2012-02-01

Human hepatitis B virus (HBV) is characterized by a high species specificity and a distinct liver tropism. Within the liver, HBV replication occurs in differentiated and polarized hepatocytes. Accordingly, the in vitro HBV infection of primary human hepatocytes (PHHs) and the human hepatoma cell line, HepaRG, is restricted to differentiated, hepatocyte-like cells. Though preparations of PHH contain up to 100% hepatic cells, cultures of differentiated HepaRG cells are a mixture of hepatocyte-like and biliary-like epithelial cells. We used PHH and HepaRG cells and compared the influence of virus inoculation dose, cell differentiation, and polarization on productive HBV infection. At multiplicities of genome equivalents (mge) >8,000, almost 100% of PHHs could be infected. In contrast, only a subset of HepaRG cells stained positive for HBcAg at comparable or even higher mge. Infection predominantly occurred at the edges of islands of hepatocyte-like HepaRG cells. This indicates a limited accessibility of the HBV receptor, possibly as a result of its polar sorting. Multidrug resistance protein 2 (MRP2), a marker selectively transported to the apical (i.e., canalicular) cell membrane, revealed two polarization phenotypes of HepaRG cells. HBV infection within the islands of hepatocyte-like HepaRG cells preferentially occurred in cells that resemble PHH, exhibiting canalicular structures. However, disruption of cell-cell junctions allowed the additional infection of cells that do not display a PHH-like polarization. HBV enters hepatocytes via the basolateral membrane. This model, at least partially, explains the difference of PHH and HepaRG cells in infection efficacy, provides insights into natural HBV infection, and establishes a basis for optimization of the HepaRG infection system. Copyright © 2011 American Association for the Study of Liver Diseases.

Production Function of Outgassed Volatiles on Mercury: Implications for Polar Volatiles on Mercury and the Moon

Science.gov (United States)

Deutsch, A. N.; Head, J. W.

2018-05-01

We are interested in the flux of volatiles delivered to the polar regions of Mercury and the Moon through time. We integrate the production functions for volatile delivery from impacts, solar wind, and volcanism, which we focus on initially.

A nonsense mutation of γD-crystallin associated with congenital nuclear and posterior polar cataract in a Chinese family.

Science.gov (United States)

Zhai, Yi; Li, Jinyu; Zhu, Yanan; Xia, Yan; Wang, Wei; Yu, Yinhui; Yao, Ke

2014-01-01

The goal of this study was to characterize the disease-causing mutations in a Chinese family with congenital nuclear and posterior polar cataracts. Clinical data of patients in the family were recorded using slit-lamp photography and high definition video. Genomic DNA samples were extracted from the peripheral blood of the pedigree members and 100 healthy controls. Mutation screening was performed in the candidate genes by bi-directional sequencing of the amplified products. The congenital cataract phenotype of the pedigree was identified by slit-lamp examinations and observation during surgery as nuclear and posterior polar cataracts. Through the sequencing of the candidate genes, a heterozygous c. 418C>T change was detected in the coding region of the γD-crystallin gene (CRYGD). As a result of this change, a highly conserved arginine residue was replaced by a stop codon (p. R140X). This change was discovered among all of the affected individuals with cataracts, but not among the unaffected family members or the 100 ethnically matched controls. This study identified a novel congenital nuclear and posterior polar cataract phenotype caused by the recurrent mutation p. R140X in CRYGD.

The predominant WT1 isoform (+KTS) encodes a DNA-binding protein targeting the planar cell polarity gene Scribble in renal podocytes.

Science.gov (United States)

Wells, Julie; Rivera, Miguel N; Kim, Woo Jae; Starbuck, Kristen; Haber, Daniel A

2010-07-01

WT1 encodes a tumor suppressor first identified by its inactivation in Wilms' Tumor. Although one WT1 splicing variant encodes a well-characterized zinc finger transcription factor, little is known about the function of the most prevalent WT1 isoform, whose DNA binding domain is disrupted by a three-amino acid (KTS) insertion. Using cells that conditionally express WT1(+KTS), we undertook a genome-wide chromatin immunoprecipitation and cloning analysis to identify candidate WT1(+KTS)-regulated promoters. We identified the planar cell polarity gene Scribble (SCRB) as the first WT1(+KTS) target gene in podocytes of the kidney. WT1 and SCRB expression patterns overlap precisely in developing renal glomeruli of mice, and WT1(+KTS) binds to a 33-nucleotide region within the Scribble promoter in mouse and human cell lines and kidneys. Together, our results support a role for the predominant WT1(+KTS) isoform in transcriptional regulation and suggest a link between the WT1-dependent tumor suppressor pathway and a key component of the planar cell polarity pathway.

The predominant WT1 isoform (+KTS) encodes a DNA binding protein targeting the planar cell polarity gene Scribble in renal podocytes

Science.gov (United States)

Wells, Julie; Rivera, Miguel N.; Kim, Woo Jae; Starbuck, Kristen; Haber, Daniel A.

2010-01-01

WT1 encodes a tumor suppressor, first identified by its inactivation in Wilms Tumor. While one WT1 splicing variant encodes a well-characterized zinc finger transcription factor, little is known about the function of the most prevalent WT1 isoform, whose DNA binding domain is disrupted by a three amino acid (KTS) insertion. Using cells which conditionally express WT1(+KTS), we undertook a genome-wide chromatin immunoprecipitation and cloning (ChIP-cloning) analysis to identify candidate WT1(+KTS) regulated promoters. We identified the planar cell polarity (PCP) gene Scribble (SCRB) as the first WT1(+KTS) target gene in podocytes of the kidney. WT1 and SCRB expression patterns overlap precisely in developing renal glomeruli of mice, and WT1(+KTS) binds to a 33 nucleotide region within the Scribble promoter in both mouse and human cell lines and kidneys. Together, our results support a role for the predominant WT1(+KTS) isoform in transcriptional regulation and suggest a link between the WT1-dependent tumor suppressor pathway and a key component of the planar cell polarity pathway. PMID:20571064

Single-spin asymmetry in electro-production of π+ π- pairs from a transversely polarized proton target at the HERMES experiment

International Nuclear Information System (INIS)

Lu, Xiao-Rui

2008-09-01

In this thesis, the measurement of an azimuthal amplitude of the asymmetry in the lepto-production of π + π - pairs at the HERMES experiment is reported. The experiment was carried out at DESY in Germany, utilizing the longitudinally polarized 27.6 GeV electron/positron beam of the HERA storage ring in combination with a longitudinally or transversely polarized gaseous target internal to the beam pipe. For the present measurement, the transversely polarized proton target was used and the beam polarization was averaged out in order to measure the asymmetry A UT . A Ring Imaging Cerenkov (RICH) detector allows the precise identification of pions, kaons and protons over essentially the entire momentum range of the experiment. The asymmetry A UT for π + π - pair production was measured for the first time in the world by HERMES. The amplitudes are extracted as functions of different kinematic variables, which can facilitate the comparison with the theoretical models and the extraction of transversity with combination of the measurement of the dihadron fragmentation function. (orig.)

Regulation of Cell and Gene Therapy Medicinal Products in Taiwan.

Science.gov (United States)

Lin, Yi-Chu; Wang, Po-Yu; Tsai, Shih-Chih; Lin, Chien-Liang; Tai, Hsuen-Yung; Lo, Chi-Fang; Wu, Shiow-Ing; Chiang, Yu-Mei; Liu, Li-Ling

2015-01-01

Owing to the rapid and mature development of emerging biotechnology in the fields of cell culture, cell preservation, and recombinant DNA technology, more and more cell or gene medicinal therapy products have been approved for marketing, to treat serious diseases which have been challenging to treat with current medical practice or medicine. This chapter will briefly introduce the Taiwan Food and Drug Administration (TFDA) and elaborate regulation of cell and gene therapy medicinal products in Taiwan, including regulatory history evolution, current regulatory framework, application and review procedures, and relevant jurisdictional issues. Under the promise of quality, safety, and efficacy of medicinal products, it is expected the regulation and environment will be more flexible, streamlining the process of the marketing approval of new emerging cell or gene therapy medicinal products and providing diverse treatment options for physicians and patients.

Secondary production at the Polar Front, Barents Sea, August 2007

Science.gov (United States)

Basedow, Sünnje L.; Zhou, Meng; Tande, Kurt S.

2014-02-01

To investigate spatial patterns of secondary production we sampled four core hydrographical regions of the Polar Front in the Barents Sea (Arctic Water, ArW; Polar Front Water, PFW; Atlantic Water, AtW; and Melt Water, MW) by towing an undulating instrument platform along a transect crossing the front from August 8-9, 2007. Sensors mounted on the platform provided data on the hydrography (CTD), fluorescence (Fluorometer, F) and zooplankton abundance in the size range between 0.1 and 30 mm (Laser Optical Plankton Counter, LOPC). These continuous, biophysical data with high-spatial resolution were supplemented by discrete water and zooplankton net samples at stations for sensor calibrations. After in depth quality assessments of the biophysical data, estimates were made of the vital rates based on biovolume spectrum theory. Five size groups were distinguished from the LOPC data: small (S), mainly Oithona spp. and the appendicularian Fritillaria sp.; medium (M), mainly Pseudocalanus spp. and Calanus spp. CI-CIII; large (L), mainly Calanus spp. CIV-CV; and extra large (XL and 2XL), juvenile and adult euphausids. Size groups were further divided based on transparency of organisms. Vital rates based on the biophysical in situ data in combination with biovolume spectrum theories agreed generally well with data from empirical and numerical models in the literature. ArW was characterised by subsurface maxima of chlorophyll a (chl a), and an estimated population growth of ca. 13 mg C m- 3 d- 1 for CI-CIII Calanus spp. and some older Pseudocalanus within the chl a maxima. Frontal waters were characterised by low chl a concentrations, but high abundances and production (around 1 g C m- 3 d- 1) of small copepods (Oithona spp.) and appendicularians (Fritillaria sp.). The estimated production of small-size zooplankton was an order of magnitude higher than the production of all other size groups combined, including large copepods. The high loss rates (- 166 to - 271 mg C m- 3 d- 1

Lambda hyperon production and polarization in collisions of p(3.5 GeV)+Nb

International Nuclear Information System (INIS)

Agakishiev, G.; Belyaev, A.V.; Chernenko, S.; Fateev, O.V.; Ierusalimov, A.; Ladygin, V.; Muentz, C.; Vasiliev, T.; Zanevsky, Y.V.; Arnold, O.; Berger-Chen, J.C.; Epple, E.; Fabbietti, L.; Lalik, R.; Lapidus, K.; Schmah, A.; Siebenson, J.; Balanda, A.; Dybczak, A.; Michalska, B.; Palka, M.; Przygoda, W.; Salabura, P.; Trebacz, R.; Belver, D.; Cabanelas, P.; Garzon, J.A.; Kornakov, G.; Blanco, A.; Fonte, P.; Lopes, L.; Mangiarotti, A.; Boehmer, M.; Friese, J.; Gernhaeuser, R.; Jurkovic, M.; Kruecken, R.; Maier, L.; Weber, M.; Boyard, J.L.; Hennino, T.; Liu, T.; Ramstein, B.; Finocchiaro, P.; Froehlich, I.; Goebel, K.; Lorenz, M.; Markert, J.; Michel, J.; Pachmayer, Y.C.; Pechenova, O.; Rustamov, A.; Stroebele, H.; Tarantola, A.; Teilab, K.; Galatyuk, T.; Gonzalez-Diaz, D.; Golubeva, M.; Guber, F.; Ivashkin, A.; Karavicheva, T.; Kurepin, A.; Reshetin, A.; Sadovsky, A.; Gumberidze, M.; Heinz, T.; Holzmann, R.; Koenig, I.; Koenig, W.; Kolb, B.W.; Lang, S.; Pechenov, V.; Pietraszko, J.; Schwab, E.; Sturm, C.; Traxler, M.; Yurevich, S.; Iori, I.; Kaempfer, B.; Kotte, R.; Naumann, L.; Wendisch, C.; Wuestenfeld, J.; Krasa, A.; Krizek, F.; Kugler, A.; Sobolev, Yu.G.; Tlusty, P.; Wagner, V.; Kuc, H.; Kuehn, W.; Metag, V.; Spataro, S.; Spruck, B.; Lebedev, A.; Parpottas, Y.; Tsertos, H.; Stroth, J.

2014-01-01

Results on Λ hyperon production are reported for collisions of p(3.5 GeV) + Nb, studied with the High-Acceptance Di-Electron Spectrometer (HADES) at SIS18 at GSI Helmholtzzentrum for Heavy-Ion Research, Darmstadt. The transverse mass distributions in rapidity bins are well described by Boltzmann shapes with a maximum inverse slope parameter of about 90 MeV at a rapidity of y = 1.0, i.e. slightly below the center-of-mass rapidity for nucleon-nucleon collisions, y cm = 1.12. The rapidity density decreases monotonically with increasing rapidity within a rapidity window ranging from 0.3 to 1.3. The Λ phase-space distribution is compared with results of other experiments and with predictions of two transport approaches which are available publicly. None of the present versions of the employed models is able to fully reproduce the experimental distributions, i.e. in absolute yield and in shape. Presumably, this finding results from an insufficient modelling in the transport models of the elementary processes being relevant for Λ production, rescattering and absorption. The present high-statistics data allow for a genuine two-dimensional investigation as a function of phase space of the self-analyzing Λ polarization in the weak decay Λ → pπ - . Finite negative values of the polarization in the order of 5-20% are observed over the entire phase space studied. The absolute value of the polarization increases almost linearly with increasing transverse momentum for p t > 300 MeV/c and increases with decreasing rapidity for y < 0.8. (orig.)

Lambda hyperon production and polarization in collisions of p(3.5 GeV)+Nb

Energy Technology Data Exchange (ETDEWEB)

Agakishiev, G.; Belyaev, A.V.; Chernenko, S.; Fateev, O.V.; Ierusalimov, A.; Ladygin, V.; Muentz, C.; Vasiliev, T.; Zanevsky, Y.V. [Joint Institute of Nuclear Research, Dubna (Russian Federation); Arnold, O.; Berger-Chen, J.C.; Epple, E.; Fabbietti, L.; Lalik, R.; Lapidus, K.; Schmah, A.; Siebenson, J. [Excellence Cluster ' ' Origin and Structure of the Universe' ' , Garching (Germany); Balanda, A.; Dybczak, A.; Michalska, B.; Palka, M.; Przygoda, W.; Salabura, P.; Trebacz, R. [Jagiellonian University of Cracow, Smoluchowski Institute of Physics, Krakow (Poland); Belver, D.; Cabanelas, P.; Garzon, J.A.; Kornakov, G. [Univ. de Santiago de Compostela, LabCAF F. Fisica, Santiago de Compostela (Spain); Blanco, A.; Fonte, P.; Lopes, L.; Mangiarotti, A. [LIP-Laboratorio de Instrumentacao e Fisica Experimental de Particulas, Coimbra (Portugal); Boehmer, M.; Friese, J.; Gernhaeuser, R.; Jurkovic, M.; Kruecken, R.; Maier, L.; Weber, M. [Technische Universitaet Muenchen, Physik Department E12, Garching (Germany); Boyard, J.L.; Hennino, T.; Liu, T.; Ramstein, B. [Universite Paris Sud, Institut de Physique Nucleaire (UMR 8608), CNRS/IN2P3, Orsay Cedex (France); Finocchiaro, P. [Laboratori Nazionali del Sud, INFN, Catania (Italy); Froehlich, I.; Goebel, K.; Lorenz, M.; Markert, J.; Michel, J.; Pachmayer, Y.C.; Pechenova, O.; Rustamov, A.; Stroebele, H.; Tarantola, A.; Teilab, K. [Johann Wolfgang Goethe-Universitaet, Institut fuer Kernphysik, Frankfurt (Germany); Galatyuk, T.; Gonzalez-Diaz, D. [Technische Universitaet Darmstadt, Darmstadt (Germany); Golubeva, M.; Guber, F.; Ivashkin, A.; Karavicheva, T.; Kurepin, A.; Reshetin, A.; Sadovsky, A. [Russian Academy of Science, Institute for Nuclear Research, Moscow (Russian Federation); Gumberidze, M. [Technische Universitaet Darmstadt, Darmstadt (Germany); Universite Paris Sud, Institut de Physique Nucleaire (UMR 8608), CNRS/IN2P3, Orsay Cedex (France); Heinz, T.; Holzmann, R.; Koenig, I.; Koenig, W.; Kolb, B.W.; Lang, S.; Pechenov, V.; Pietraszko, J.; Schwab, E.; Sturm, C.; Traxler, M.; Yurevich, S. [GSI Helmholtzzentrum fuer Schwerionenforschung GmbH, Darmstadt (Germany); Iori, I. [Sezione di Milano, INFN, Milano (Italy); Kaempfer, B.; Kotte, R.; Naumann, L.; Wendisch, C.; Wuestenfeld, J. [Helmholtz-Zentrum Dresden-Rossendorf, Institut fuer Strahlenphysik, Dresden (Germany); Krasa, A.; Krizek, F.; Kugler, A.; Sobolev, Yu.G.; Tlusty, P.; Wagner, V. [Academy of Sciences of Czech Republic, Nuclear Physics Institute, Rez (Czech Republic); Kuc, H. [Jagiellonian University of Cracow, Smoluchowski Institute of Physics, Krakow (Poland); Universite Paris Sud, Institut de Physique Nucleaire (UMR 8608), CNRS/IN2P3, Orsay Cedex (France); Kuehn, W.; Metag, V.; Spataro, S.; Spruck, B. [Justus Liebig Universitaet Giessen, II.Physikalisches Institut, Giessen (Germany); Lebedev, A. [Institute of Theoretical and Experimental Physics, Moscow (Russian Federation); Parpottas, Y.; Tsertos, H. [University of Cyprus, Department of Physics, Nicosia (Cyprus); Stroth, J. [GSI Helmholtzzentrum fuer Schwerionenforschung GmbH, Darmstadt (Germany); Johann Wolfgang Goethe-Universitaet, Institut fuer Kernphysik, Frankfurt (Germany); Collaboration: HADES Collaboration

2014-05-15

Results on Λ hyperon production are reported for collisions of p(3.5 GeV) + Nb, studied with the High-Acceptance Di-Electron Spectrometer (HADES) at SIS18 at GSI Helmholtzzentrum for Heavy-Ion Research, Darmstadt. The transverse mass distributions in rapidity bins are well described by Boltzmann shapes with a maximum inverse slope parameter of about 90 MeV at a rapidity of y = 1.0, i.e. slightly below the center-of-mass rapidity for nucleon-nucleon collisions, y{sub cm} = 1.12. The rapidity density decreases monotonically with increasing rapidity within a rapidity window ranging from 0.3 to 1.3. The Λ phase-space distribution is compared with results of other experiments and with predictions of two transport approaches which are available publicly. None of the present versions of the employed models is able to fully reproduce the experimental distributions, i.e. in absolute yield and in shape. Presumably, this finding results from an insufficient modelling in the transport models of the elementary processes being relevant for Λ production, rescattering and absorption. The present high-statistics data allow for a genuine two-dimensional investigation as a function of phase space of the self-analyzing Λ polarization in the weak decay Λ → pπ{sup -}. Finite negative values of the polarization in the order of 5-20% are observed over the entire phase space studied. The absolute value of the polarization increases almost linearly with increasing transverse momentum for p{sub t} > 300 MeV/c and increases with decreasing rapidity for y < 0.8. (orig.)

Feasibility studies of a polarized positron source based on the Bremsstrahlung of polarized electrons

International Nuclear Information System (INIS)

Dumas, J.

2011-09-01

The nuclear and high-energy physics communities have shown a growing interest in the availability of high current, highly-polarized positron beams. A sufficiently energetic polarized photon or lepton incident on a target may generate, via Bremsstrahlung and pair creation within a solid target foil, electron-positron pairs that should carry some fraction of the initial polarization. Recent advances in high current (> 1 mA) spin polarized electron sources at Jefferson Lab offer the perspective of creating polarized positrons from a low energy electron beam. This thesis discusses polarization transfer from electrons to positrons in the perspective of the design optimization of a polarized positron source. The PEPPo experiment, aiming at a measurement of the positron polarization from a low energy (< 10 MeV) highly spin polarized electron beam is discussed. A successful demonstration of this technique would provide an alternative scheme for the production of low energy polarized positrons and useful information for the optimization of the design of polarized positron sources in the sub-GeV energy range. (author)

χc charmonium - a tool to investigate gluon polarization

International Nuclear Information System (INIS)

Batunin, A.V.; Slabospitskij, S.R.

1986-01-01

Production of particles with a hidden charm Χ C in polarized parton beams (quarks or gluons) is studied. Parton polarization is shown to cause the changes of angular distributions of Χ C meson decay products, which allows one to investigate possible gluon polarization in hadrons

Genetic Resources for Advanced Biofuel Production Described with the Gene Ontology

Directory of Open Access Journals (Sweden)

Trudy eTorto-Alalibo

2014-10-01

Full Text Available Dramatic increases in research in the area of microbial biofuel production coupled with high-throughput data generation on bioenergy-related microbes has led to a deluge of information in the scientific literature and in databases. Consolidating this information and making it easily accessible requires a unified vocabulary. The Gene Ontology (GO fulfills that requirement, as it is a well-developed structured vocabulary that describes the activities and locations of gene products in a consistent manner across all kingdoms of life. The Microbial Energy Gene Ontology (MENGO: http://www.mengo.biochem.vt.edu project is extending the GO to include new terms to describe microbial processes of interest to bioenergy production. Our effort has added over 600 bioenergy related terms to the Gene Ontology. These terms will aid in the comprehensive annotation of gene products from diverse energy-related microbial genomes. An area of microbial energy research that has received a lot of attention is microbial production of advanced biofuels. These include alcohols such as butanol, isopropanol, isobutanol, and fuels derived from fatty acids, isoprenoids, and polyhydroxyalkanoates. These fuels are superior to first generation biofuels (ethanol and biodiesel esterified from vegetable oil or animal fat, can be generated from non-food feedstock sources, can be used as supplements or substitutes for gasoline, diesel and jet fuels, and can be stored and distributed using existing infrastructure. Here we review the roles of genes associated with synthesis of advanced biofuels, and at the same time introduce the use of the GO to describe the functions of these genes in a standardized way.

Weak production of strangeness at threshold with polarization observables

International Nuclear Information System (INIS)

Baker, O.K.

2002-01-01

The differential cross section for the charged current electroweak reaction e → +p → ν → e +Λ → at threshold with polarization observables is presented. The form of the cross section at threshold for the reaction is simplified compared to higher energy. An expression is given for the invariant matrix element appropriate for the reaction when the incident electron is polarized, and the final state hyperon polarization is determined. The energy dependence of the resulting cross section is shown near threshold. Under the right kinematic conditions, there can be a sizeable enhancement in the cross section, making an experimental measurement of the weak axial-vector form factor feasible

Polarized Proton Collisions at RHIC

CERN Document Server

Bai, Mei; Alekseev, Igor G; Alessi, James; Beebe-Wang, Joanne; Blaskiewicz, Michael; Bravar, Alessandro; Brennan, Joseph M; Bruno, Donald; Bunce, Gerry; Butler, John J; Cameron, Peter; Connolly, Roger; De Long, Joseph; Drees, Angelika; Fischer, Wolfram; Ganetis, George; Gardner, Chris J; Glenn, Joseph; Hayes, Thomas; Hseuh Hsiao Chaun; Huang, Haixin; Ingrassia, Peter; Iriso, Ubaldo; Laster, Jonathan S; Lee, Roger C; Luccio, Alfredo U; Luo, Yun; MacKay, William W; Makdisi, Yousef; Marr, Gregory J; Marusic, Al; McIntyre, Gary; Michnoff, Robert; Montag, Christoph; Morris, John; Nicoletti, Tony; Oddo, Peter; Oerter, Brian; Osamu, Jinnouchi; Pilat, Fulvia Caterina; Ptitsyn, Vadim; Roser, Thomas; Satogata, Todd; Smith, Kevin T; Svirida, Dima; Tepikian, Steven; Tomas, Rogelio; Trbojevic, Dejan; Tsoupas, Nicholaos; Tuozzolo, Joseph; Vetter, Kurt; Wilinski, Michelle; Zaltsman, Alex; Zelenski, Anatoli; Zeno, Keith; Zhang, S Y

2005-01-01

The Relativistic Heavy Ion Collider~(RHIC) provides not only collisions of ions but also collisions of polarized protons. In a circular accelerator, the polarization of polarized proton beam can be partially or fully lost when a spin depolarizing resonance is encountered. To preserve the beam polarization during acceleration, two full Siberian snakes were employed in RHIC to avoid depolarizing resonances. In 2003, polarized proton beams were accelerated to 100~GeV and collided in RHIC. Beams were brought into collisions with longitudinal polarization at the experiments STAR and PHENIX by using spin rotators. RHIC polarized proton run experience demonstrates that optimizing polarization transmission efficiency and improving luminosity performance are significant challenges. Currently, the luminosity lifetime in RHIC is limited by the beam-beam effect. The current state of RHIC polarized proton program, including its dedicated physics run in 2005 and efforts to optimize luminosity production in beam-beam limite...

Enhanced citrate production through gene insertion in Aspergillus niger

DEFF Research Database (Denmark)

Jongh, Wian de; Nielsen, Jens

2007-01-01

The effect of inserting genes involved in the reductive branch of the tricarboxylic acid (TCA) cycle on citrate production by Aspergillus niger was evaluated. Several different genes were inserted individually and in combination, i.e. malate dehydrogenase (mdh2) from Saccharomyces cerevisiae, two...

Epstein-Barr virus immediate-early gene product trans-activates gene expression from the human immunodeficiency virus long terminal repeat

International Nuclear Information System (INIS)

Kenney, S.; Kamine, J.; Markovitz, D.; Fenrick, R.; Pagano, J.

1988-01-01

Acquired immunodeficiency syndrome patients are frequently coinfected with Epstein-Barr virus (EBV). In this report, the authors demonstrate that an EBV immediate-early gene product, BamHI MLF1, stimulates expression of the bacterial chloramphenicol acetyltransferase (CAT) gene linked to the human immunodeficiency virus (HIV) promoter. The HIV promoter sequences necessary for trans-activation by EBV do not include the tat-responsive sequences. In addition, in contrast to the other herpesvirus trans-activators previously studied, the EBV BamHI MLF1 gene product appears to function in part by a posttranscriptional mechanism, since it increases pHIV-CAT protein activity more than it increases HIV-CAT mRNA. This ability of an EBV gene product to activate HIV gene expression may have biologic consequences in persons coinfected with both viruses

Perceiving polarization with the naked eye: characterization of human polarization sensitivity

Science.gov (United States)

Temple, Shelby E.; McGregor, Juliette E.; Miles, Camilla; Graham, Laura; Miller, Josie; Buck, Jordan; Scott-Samuel, Nicholas E.; Roberts, Nicholas W.

2015-01-01

Like many animals, humans are sensitive to the polarization of light. We can detect the angle of polarization using an entoptic phenomenon called Haidinger's brushes, which is mediated by dichroic carotenoids in the macula lutea. While previous studies have characterized the spectral sensitivity of Haidinger's brushes, other aspects remain unexplored. We developed a novel methodology for presenting gratings in polarization-only contrast at varying degrees of polarization in order to measure the lower limits of human polarized light detection. Participants were, on average, able to perform the task down to a threshold of 56%, with some able to go as low as 23%. This makes humans the most sensitive vertebrate tested to date. Additionally, we quantified a nonlinear relationship between presented and perceived polarization angle when an observer is presented with a rotatable polarized light field. This result confirms a previous theoretical prediction of how uniaxial corneal birefringence impacts the perception of Haidinger's brushes. The rotational dynamics of Haidinger's brushes were then used to calculate corneal retardance. We suggest that psychophysical experiments, based upon the perception of polarized light, are amenable to the production of affordable technologies for self-assessment and longitudinal monitoring of visual dysfunctions such as age-related macular degeneration. PMID:26136441

MODY-like diabetes associated with an apparently balanced translocation: possible involvement of MPP7 gene and cell polarity in the pathogenesis of diabetes

Directory of Open Access Journals (Sweden)

Bartov Guy

2009-02-01

Full Text Available Abstract Background Characterization of disease-associated balanced translocations has led to the discovery of genes responsible for many disorders, including syndromes that include various forms of diabetes mellitus. We studied a man with unexplained maturity onset diabetes of the young (MODY-like diabetes and an apparently balanced translocation [46,XY,t(7;10(q22;p12] and sought to identify a novel diabetes locus by characterizing the translocation breakpoints. Results Mutations in coding exons and splice sites of known MODY genes were first ruled out by PCR amplification and DNA sequencing. Fluorescent in situ hybridization (FISH studies demonstrated that the translocation did not disrupt two known diabetes-related genes on 10p12. The translocation breakpoints were further mapped to high resolution using FISH and somatic cell hybrids and the junctions PCR-amplified and sequenced. The translocation did not disrupt any annotated transcription unit. However, the chromosome 10 breakpoint was 220 kilobases 5' to the Membrane Protein, Palmitoylated 7 (MPP7 gene, which encodes a protein required for proper cell polarity. This biological function is shared by HNF4A, a known MODY gene. Databases show MPP7 is highly expressed in mouse pancreas and is expressed in human islets. The translocation did not appear to alter lymphoblastoid expression of MPP7 or other genes near the breakpoints. Conclusion The balanced translocation and MODY-like diabetes in the proband could be coincidental. Alternatively, the translocation may cause islet cell dysfunction by altering MPP7 expression in a subtle or tissue-specific fashion. The potential roles of MPP7 mutations in diabetes and perturbed islet cell polarity in insulin secretion warrant further study.

Polarization and spin effects in production and decay of charginos and neutralinos at a muon collider

Energy Technology Data Exchange (ETDEWEB)

Pahlen, F. von der

2006-06-14

In this thesis we have analyzed the polarization effects of the beams and the charginos and neutralinos produced in {mu}{sup +}{mu}{sup -} annihilation around the center of mass energies of the Higgs boson resonances H and A. we have analyzed the effect of the energy spread and of the error from the non-resonant channels, including an irreducible standard model background contribution. For small tan {beta} the process yields large cross sections of up to a pb. For the production of two different charginos we have shown that the H-A interference can be analyzed using asymmetries of the charge conjugated processes. For the chargino pair production with subsequent two-body decays of both charginos we have defined energy distribution and angular asymmetries in the final particles, in order to analyze the spin-spin correlations of the charginos. For the neutralino pair production in {mu}{sup +}{mu}{sup -} annihilation we study similar processes as for chargino production. Line shape measurements of neutralino pair production allow to precisely determine the ratio of H-neutralino and A-neutralino couplings. For neutralino pair production with subsequent two-body decays of both neutralinos we analyze similar observables as in chargino production. The main difference consists in the intrinsic relative CP quantum number of the neutralino pair, which depends on the chosen scenario. We have thus shown that the interaction of the Higgs bosons to the gaugino-higgsino sector can be probed at a muon collider in chargino and neutralino pair production, both analyzing the production line-shape around the resonances as well as studying the chargino and neutralino polarizations via their decays. (orig.)

Gravistimulation changes expression of genes encoding putative carrier proteins of auxin polar transport in etiolated pea epicotyls

Science.gov (United States)

Hoshino, T.; Hitotsubashi, R.; Miyamoto, K.; Tanimoto, E.; Ueda, J.

STS-95 space experiment has showed that auxin polar transport in etiolated epicotyls of pea (Pisum sativum L. cv. Alaska) seedlings is controlled by gravistimulation. In Arabidopsis thaliana auxin polar transport has considered to be regulated by efflux and influx carrier proteins in plasma membranes, AtPIN1 and AtAUX1, respectively. In order to know how gravistimuli control auxin polar transport in etiolated pea epicotyls at molecular levels, strenuous efforts have been made, resulting in successful isolation of full-length cDNAs of a putative auxin efflux and influx carriers, PsPIN2 and PsAUX1, respectively. Significantly high levels in homology were found on nucleotide and deduced amino acid sequences among PsPIN2, PsPIN1 (accession no. AY222857, Chawla and DeMason, 2003) and AtPINs, and also among PsAUX1, AtAUX1 and their related genes. Phylogenetic analyses based on the deduced amino acid sequences revealed that PsPIN2 belonged to a subclade including AtPIN3, AtPIN4 relating to lateral transport of auxin, while PsPIN1 belonged to the same clade as AtPIN1 relating to auxin polar transport. In the present study, we examined the effects of gravistimuli on the expression of PsPINs and PsAUX1 in etiolated pea seedlings by northern blot analysis. Expression of PsPIN1, PsPIN2 and PsAUX1 in hook region of 3.5-d-old etiolated pea seedlings grown under simulated microgravity conditions on a 3-D clinostat increased as compared with that of the seedlings grown under 1 g conditions. On the other hand, that of PsPIN1 and PsAUX1 in the 1st internode region under simulated microgravity conditions on a 3-D clinostat also increased, while that of PsPIN2 was affected little. These results suggest that expression of PsPIN1, PsPIN2 and PsAUX1 regulating polar/lateral transport of auxin is substantially under the control of gravity. A possible role of PsPINs and PsAUX1 of auxin polar transport in etiolated pea seedlings will also be discussed.

Polarized proton colliders

International Nuclear Information System (INIS)

Roser, T.

1995-01-01

High energy polarized beam collisions will open up the unique physics opportunities of studying spin effects in hard processes. This will allow the study of the spin structure of the proton and also the verification of the many well documented expectations of spin effects in perturbative QCD and parity violation in W and Z production. Proposals for polarized proton acceleration for several high energy colliders have been developed. A partial Siberian Snake in the AGS has recently been successfully tested and full Siberian Snakes, spin rotators, and polarimeters for RHIC are being developed to make the acceleration of polarized beams to 250 GeV possible. This allows for the unique possibility of colliding two 250 GeV polarized proton beams at luminosities of up to 2 x 10 32 cm -2 s -1

The immunomodulatory gene products of myxoma virus

Indian Academy of Sciences (India)

Unknown

273. Keywords. Gene products; myxoma virus; Oryctolagus cuniculus; poxvirus; skin lesions ...... these data is that these viral proteins do not promote class .... Cudmore S, Reckmann I and Way M 1997 Viral manipulations of the actin ...

Prompt charmonia production and polarization at LHC in the NRQCD with k{sub T}-factorization. Pt. III. J/ψ meson

Energy Technology Data Exchange (ETDEWEB)

Baranov, S.P. [P.N. Lebedev Physics Instiute, Moscow (Russian Federation); Lipatov, A.V. [Lomonosov Moscow State Univ., Moscow (Russian Federation). Skobeltsyn Inst. of Nuclear Physics; Joint Institute for Nuclear Research, Dubna (Russian Federation)

2016-12-01

In the framework of k{sub T}-factorization approach, the production and polarization of prompt J/ψ mesons at the LHC energies is studied. Our consideration is based on the non-relativistic QCD formalism for bound states and off-shell amplitudes for hard partonic subprocesses. Both the direct production mechanism and feed-down contributions from χ{sub c} and ψ(2S) decays are taken into account. The transverse momentum dependent (or unintegrated) gluon densities in a proton were derived from Ciafaloni-Catani-Fiorani-Marchesini evolution equation or, alternatively, were chosen in accordance with Kimber-Martin-Ryskin prescription. The non-perturbative color-octet matrix elements were first deduced from the fits to the latest CMS data on J/ψ transverse momentum distributions and then applied to describe the ATLAS and LHCb data on J/ψ production and polarization at √(s)=7, 8 and 13 TeV. We perform an estimation of polarization parameters λ{sub θ}, λ{sub φ} and λ{sub θφ} which determine J/ψ spin density matrix and demonstrate that treating the soft gluon emission as a series of explicit color-electric dipole transitions within NRQCD leads to unpolarized J/ψ production at high transverse momenta, that is in qualitative agreement with the LHC data.

Evolution of the YABBY gene family in seed plants.

Science.gov (United States)

Finet, Cédric; Floyd, Sandra K; Conway, Stephanie J; Zhong, Bojian; Scutt, Charles P; Bowman, John L

2016-01-01

Members of the YABBY gene family of transcription factors in angiosperms have been shown to be involved in the initiation of outgrowth of the lamina, the maintenance of polarity, and establishment of the leaf margin. Although most of the dorsal-ventral polarity genes in seed plants have homologs in non-spermatophyte lineages, the presence of YABBY genes is restricted to seed plants. To gain insight into the origin and diversification of this gene family, we reconstructed the evolutionary history of YABBY gene lineages in seed plants. Our findings suggest that either one or two YABBY genes were present in the last common ancestor of extant seed plants. We also examined the expression of YABBY genes in the gymnosperms Ephedra distachya (Gnetales), Ginkgo biloba (Ginkgoales), and Pseudotsuga menziesii (Coniferales). Our data indicate that some YABBY genes are expressed in a polar (abaxial) manner in leaves and female cones in gymnosperms. We propose that YABBY genes already acted as polarity genes in the last common ancestor of extant seed plants. © 2016 Wiley Periodicals, Inc.

Vasopressin Gene-Related Products in the Management of Breast Cancer

National Research Council Canada - National Science Library

North, William

1998-01-01

.... The VP gene is expressed by seemingly all breast cancers and by all DCIS, and this information coupled with an absence of VP gene-related products from fibrocystic disease potentially provides us...

Polarized semi-inclusive deep-inelastic scattering on transversely and longitudinally polarized nucleons at HERMES

International Nuclear Information System (INIS)

Hommes, B.

2005-01-01

The HERMES experiment has measured double spin asymmetries in the cross section for deep-inelastic scattering of longitudinal polarized positrons off longitudinal polarized hydrogen and deuterium targets. From these asymmetries, based on inclusive and semi-inclusive measurements, polarized quark distributions were extracted as a function of x. Single-spin azimuthal asymmetries in semi-inclusive pion production were measured by the HERMES experiment for the first time, with a transversely polarized hydrogen target. Two different sine-dependencies were extracted which can be related to the quark transversity distribution h q 1 (x) and the Sivers function (Author)

Population genomics reveal recent speciation and rapid evolutionary adaptation in polar bears.

Science.gov (United States)

Liu, Shiping; Lorenzen, Eline D; Fumagalli, Matteo; Li, Bo; Harris, Kelley; Xiong, Zijun; Zhou, Long; Korneliussen, Thorfinn Sand; Somel, Mehmet; Babbitt, Courtney; Wray, Greg; Li, Jianwen; He, Weiming; Wang, Zhuo; Fu, Wenjing; Xiang, Xueyan; Morgan, Claire C; Doherty, Aoife; O'Connell, Mary J; McInerney, James O; Born, Erik W; Dalén, Love; Dietz, Rune; Orlando, Ludovic; Sonne, Christian; Zhang, Guojie; Nielsen, Rasmus; Willerslev, Eske; Wang, Jun

2014-05-08

Polar bears are uniquely adapted to life in the High Arctic and have undergone drastic physiological changes in response to Arctic climates and a hyper-lipid diet of primarily marine mammal prey. We analyzed 89 complete genomes of polar bear and brown bear using population genomic modeling and show that the species diverged only 479-343 thousand years BP. We find that genes on the polar bear lineage have been under stronger positive selection than in brown bears; nine of the top 16 genes under strong positive selection are associated with cardiomyopathy and vascular disease, implying important reorganization of the cardiovascular system. One of the genes showing the strongest evidence of selection, APOB, encodes the primary lipoprotein component of low-density lipoprotein (LDL); functional mutations in APOB may explain how polar bears are able to cope with life-long elevated LDL levels that are associated with high risk of heart disease in humans. Copyright © 2014 Elsevier Inc. All rights reserved.

Production of positive pions from polarized protons by linearly polarized photons in the energy region 300--420 MeV

Energy Technology Data Exchange (ETDEWEB)

Get' man, V.A.; Gorbenko, V.G.; Grushin, V.F.; Derkach, A.Y.; Zhebrovskii, Y.V.; Karnaukhov, I.M.; Kolesnikov, L.Y.; Luchanin, A.A.; Rubashkin, A.L.; Sanin, V.M.; Sorokin, P.V.; Sporov, E.A.; Telegin, Y.N.; Shalatskii, S.V.

1980-10-01

A technique for measurement of the polarization observables ..sigma.., P, and T for the reaction ..gamma..p..-->..n..pi../sup +/ in a doubly polarized experiment (polarized proton target + linearly polarized photon beam) is described. Measurements of the angular distributions of these observables in the range of pion emission angles 30--150/sup 0/ are presented for four photon energies from 300 to 420 MeV. Inclusion of the new experimental data in an energy-independent multipole analysis of photoproduction from protons permits a more reliable selection of solutions to be made.

Transcriptional regulation of genes related to progesterone production.

Science.gov (United States)

Mizutani, Tetsuya; Ishikane, Shin; Kawabe, Shinya; Umezawa, Akihiro; Miyamoto, Kaoru

2015-01-01

Steroid hormones are synthesized from cholesterol in various tissues, mainly in the adrenal glands and gonads. Because these lipid-soluble steroid hormones immediately diffuse through the cells in which they are produced, their secretion directly reflects the activity of the genes related to their production. Progesterone is important not only for luteinization and maintenance of pregnancy, but also as a substrate for most other steroids. Steroidogenic acute regulatory protein (STAR), cytochrome P450 cholesterol side-chain cleavage enzyme (P450scc), and 3β-hydroxysteroid dehydrogenase/Δ(5)-Δ(4) isomerase (3β-HSD) are well-known proteins essential for progesterone production. In addition to them, glutathione S-transferase A1-1 and A3-3 are shown to exert Δ(5)-Δ(4) isomerization activity to produce progesterone in a cooperative fashion with 3β-HSD. 5-Aminolevulinic acid synthase 1, ferredoxin 1, and ferredoxin reductase also play a role in steroidogenesis as accessory factors. Members of the nuclear receptor 5A (NR5A) family (steroidogenic factor 1 and liver receptor homolog 1) play a crucial role in the transcriptional regulation of these genes. The NR5A family activates these genes by binding to NR5A responsive elements present within their promoter regions, as well as to the elements far from their promoters. In addition, various NR5A-interacting proteins including peroxisome proliferator-activated receptor-γ coactivator-1α (PGC-1α), nuclear receptor subfamily 0, group B, member 1 (DAX-1), and CCAAT/enhancer-binding proteins (C/EBP) are involved in the transcription of NR5A target genes and regulate the transcription either positively or negatively under both basal and tropic hormone-stimulated conditions. In this review, we describe the transcriptional regulation of genes related to progesterone production.

The identification of polar organic compounds found in consumer products and their toxicological properties.

Science.gov (United States)

Cooper, S D; Raymer, J H; Pellizzari, E D; Thomas, K W

1995-01-01

Exposure to volatile organic compounds (VOCs) in the indoor environment has received substantial research attention in the past several years, with the goal of better understanding the impact of such exposures on human health and well-being. Many VOCs can arise from consumer products used within the indoor environment. The VOCs emitted from five representative consumer products were collected onto Tenax-GC and subjected to thermal desorption and analysis by gas chromatography, in combination with low-resolution mass spectrometry (MS), high-resolution MS, and matrix-isolation Fourier transform infrared spectroscopy for structural characterization. An emphasis was placed on the polar organic compounds often used to provide fragrance in these products. The structures of a number of these compounds were confirmed, and an electronic literature search was carried out on them to determine any known toxic properties. The search revealed that many of the VOCs possess toxic properties when studied at acute, relatively high-level exposures. In addition, toxic effects were reported for a few of the chemicals, such as benzaldehyde, alpha-terpineol, benzyl acetate, and ethanol, at relatively low dose levels of 9-14 mg/kg. In general, the data were unclear as to the effect of chronic, low-level exposures. The widespread use of such chemicals suggests that the health effects of chronic exposures need to be determined. Validated analytical methods for the quantitative characterization of polar organic compounds at low concentrations will be required to make such work possible.

Large-x sub F spin asymmetry in. pi. sup 0 production by 200-GeV polarized protons

Energy Technology Data Exchange (ETDEWEB)

Adams, D L; Corcoran, M D; Cranshaw, J; Nessi-Tedaldi, F; Nessi, M; Nguyen, C; Roberts, J B; Skeens, J; White, J L [Rice Univ., Houston, TX (United States). T.W. Bonner Nuclear Lab.; Akchurin, N; Onel, Y [Iowa Univ., Iowa City, IA (United States). Dept. of Physics; Belikov, N I; Derevschikov, A A; Grachov, O A; Matulenko, Yu A; Meschanin, A P; Nurushev, S B; Patalakha, D I; Rykov, V L; Solovyanov, V L; Vasiliev, A N [Inst. of High Energy Physics, Serpukhov (Russia); Bystricky, J; Lehar, F; Lesquen, A de [CEN-Saclay, 91 - Gif-sur-Yvette (France); Cossairt, J D; Read, A L [Fermi National Accelerator Lab., Batavia, IL (United States); En' yo, H; Funahashi, H; Goto, Y; Imai, K; Itow, Y; Makino, S; Masaike, A; Miyake, K; Nagamine, T; Saito, N; Yamashita, S [Kyoto Univ. (Japan). Dept. of Physics; Grosnick, D P; Hill, D A; Laghai, M; Lopiano, D; Ohashi, Y; Spinka, H; Underwood, D G; Yokosawa, A [Argonne National Lab., IL (United States); FNAL E704 Collaboration

1992-10-01

The spin asymmetry A{sub N} for inclusive {pi}{sup 0} production by 200-GeV transversely-polarized protons on a liquid hydrogen target has been measured at Fermilab over a wide range of x{sub F}, with 0.50.3, the asymmetry rises with increasing x{sub F} and reaches a value of A{sub N}=0.15{+-}0.03 in the region 0.6polarized protons. (orig.).

Form gene clustering method about pan-ethnic-group products based on emotional semantic

Science.gov (United States)

Chen, Dengkai; Ding, Jingjing; Gao, Minzhuo; Ma, Danping; Liu, Donghui

2016-09-01

The use of pan-ethnic-group products form knowledge primarily depends on a designer's subjective experience without user participation. The majority of studies primarily focus on the detection of the perceptual demands of consumers from the target product category. A pan-ethnic-group products form gene clustering method based on emotional semantic is constructed. Consumers' perceptual images of the pan-ethnic-group products are obtained by means of product form gene extraction and coding and computer aided product form clustering technology. A case of form gene clustering about the typical pan-ethnic-group products is investigated which indicates that the method is feasible. This paper opens up a new direction for the future development of product form design which improves the agility of product design process in the era of Industry 4.0.

Bioelectric modulation of macrophage polarization

Science.gov (United States)

Li, Chunmei; Levin, Michael; Kaplan, David L.

2016-02-01

Macrophages play a critical role in regulating wound healing and tissue regeneration by changing their polarization state in response to local microenvironmental stimuli. The native roles of polarized macrophages encompass biomaterials and tissue remodeling needs, yet harnessing or directing the polarization response has been largely absent as a potential strategy to exploit in regenerative medicine to date. Recent data have revealed that specific alteration of cells’ resting potential (Vmem) is a powerful tool to direct proliferation and differentiation in a number of complex tissues, such as limb regeneration, craniofacial patterning and tumorigenesis. In this study, we explored the bioelectric modulation of macrophage polarization by targeting ATP sensitive potassium channels (KATP). Glibenclamide (KATP blocker) and pinacidil (KATP opener) treatment not only affect macrophage polarization, but also influence the phenotype of prepolarized macrophages. Furthermore, modulation of cell membrane electrical properties can fine-tune macrophage plasticity. Glibenclamide decreased the secretion and gene expression of selected M1 markers, while pinacidil augmented M1 markers. More interestingly, glibencalmide promoted macrophage alternative activation by enhancing certain M2 markers during M2 polarization. These findings suggest that control of bioelectric properties of macrophages could offer a promising approach to regulate macrophage phenotype as a useful tool in regenerative medicine.

Next to Leading Order QCD Corrections to Polarized $\\Lambda$ Production in DIS

CERN Document Server

de Florian, D

1997-01-01

We calculate next to leading order QCD corrections to semi-inclusive polarized deep inelastic scattering and $e^+e^-$ annihilation cross sections for processes where the polarization of the identified final-state hadron can also be determined. Using dimensional regularization and the HVBM prescription for the $\\gamma_5$ matrix, we compute corrections for different spin-dependent observables, both in the $\\overline{MS}$ and $\\overline{MS_p}$ factorization schemes, and analyse their structure. In addition to the well known corrections to polarized parton distributions, we also present those for final-state polarized fracture functions and polarized fragmentation functions, in a consistent factorization scheme.

First results for the two-spin parameter ALL in π0 production by 200 GeV polarized protons and antiprotons

International Nuclear Information System (INIS)

Adams, D.L.; Corcoran, M.D.; Cranshaw, J.; Nessi-Tedaldi, F.; Nessi, M.; Nguyen, C.; Roberts, J.B.; Skeens, J.; White, J.L.; Bystricky, J.; Chaumette, P.; Deregel, J.; Durand, G.; Fabre, J.; Lehar, F.; Lesquen, A. de; Cossairt, J.D.; Read, A.L.; En'yo, H.; Funahashi, H.; Goto, Y.; Imai, K.; Itow, Y.; Makino, S.; Masaike, A.; Miyake, K.; Nagamine, T.; Saito, N.; Yamashita, S.; Grosnick, D.P.; Hill, D.A.; Kasprzyk, T.; Laghai, M.; Lopiano, D.; Ohashi, Y.; Shepard, J.; Spinka, H.; Underwood, D.G.; Yokosawa, A.; Iwatani, K.; Krueger, K.W.; Kuroda, K.; Michalowicz, A.; Pauletta, G.; Penzo, A.; Schiavon, P.; Zanetti, A.; Salvato, G.; Villari, A.; Takeutchi, F.; Tamura, N.; Tanaka, N.; Yoshida, T.

1991-01-01

The two-spin parameter A LL in inclusive π 0 production by longitudinally-polarized protons and antiprotons on a longitudinally-polarized proton target has been measured at the 200 GeV Fermilab spin physics facility, for π 0 's at x F = 0 with 1 ≤ p t ≤ 3 GeV/c. The results exclude, at the 95% confidence level, values of A LL (pp) > 0.1 and 0 's produced by protons, and values of A LL (anti pp) > 0.1 and LL (pp) for the gluon spin density is discussed. The data are in good agreement with 'conventional' small or zero, gluon polarization. (orig.)

Parallel Polarization State Generation.

Science.gov (United States)

She, Alan; Capasso, Federico

2016-05-17

The control of polarization, an essential property of light, is of wide scientific and technological interest. The general problem of generating arbitrary time-varying states of polarization (SOP) has always been mathematically formulated by a series of linear transformations, i.e. a product of matrices, imposing a serial architecture. Here we show a parallel architecture described by a sum of matrices. The theory is experimentally demonstrated by modulating spatially-separated polarization components of a laser using a digital micromirror device that are subsequently beam combined. This method greatly expands the parameter space for engineering devices that control polarization. Consequently, performance characteristics, such as speed, stability, and spectral range, are entirely dictated by the technologies of optical intensity modulation, including absorption, reflection, emission, and scattering. This opens up important prospects for polarization state generation (PSG) with unique performance characteristics with applications in spectroscopic ellipsometry, spectropolarimetry, communications, imaging, and security.

Single-spin asymmetry in electro-production of {pi}{sup +} {pi}{sup -} pairs from a transversely polarized proton target at the HERMES experiment

Energy Technology Data Exchange (ETDEWEB)

Lu, Xiao-Rui

2008-10-15

In this thesis, the measurement of an azimuthal amplitude of the asymmetry in the lepto-production of {pi}{sup +}{pi}{sup -} pairs at the HERMES experiment is reported. The experiment was carried out at DESY in Germany, utilizing the longitudinally polarized 27.6 GeV electron/positron beam of the HERA storage ring in combination with a longitudinally or transversely polarized gaseous target internal to the beam pipe. For the present measurement, the transversely polarized proton target was used and the beam polarization was averaged out in order to measure the asymmetry A{sub UT}. A Ring Imaging Cerenkov (RICH) detector allows the precise identification of pions, kaons and protons over essentially the entire momentum range of the experiment. The asymmetry A{sub UT} for {pi}{sup +}{pi}{sup -} pair production was measured for the first time in the world by HERMES. The amplitudes are extracted as functions of different kinematic variables, which can facilitate the comparison with the theoretical models and the extraction of transversity with combination of the measurement of the dihadron fragmentation function. (orig.)

76 FR 9028 - Guidance for Industry: Potency Tests for Cellular and Gene Therapy Products; Availability

Science.gov (United States)

2011-02-16

...] Guidance for Industry: Potency Tests for Cellular and Gene Therapy Products; Availability AGENCY: Food and... Therapy Products'' dated January 2011. The guidance document provides manufacturers of cellular and gene... for Industry: Potency Tests for Cellular and Gene Therapy Products'' dated January 2011. The guidance...

The use of microbial gene abundance in the development of fuel remediation guidelines in polar soils.

Science.gov (United States)

Richardson, Elizabeth L; King, Catherine K; Powell, Shane M

2015-04-01

Terrestrial fuel spills in Antarctica commonly occur on ice-free land around research stations as the result of human activities. Successful spill clean-ups require appropriate targets that confirm contaminated sites are no longer likely to pose environmental risk following remediation. These targets are based on knowledge of the impacts of contaminants on the soil ecosystem and on the response of native biota to contamination. Our work examined the response of soil microbial communities to fuel contamination by measuring the abundance of genes involved in critical soil processes, and assessed the use of this approach as an indicator of soil health in the presence of weathered and fresh fuels. Uncontaminated and contaminated soils were collected from the site of remediation treatment of an aged diesel spill at Casey Station, East Antarctica in December 2012. Uncontaminated soil was spiked with fresh Special Antarctic Blend (SAB) diesel to determine the response of the genes to fresh fuel. Partly remediated soil containing weathered SAB diesel was diluted with uncontaminated soil to simulate a range of concentrations of weathered fuel and used to determine the response of the genes to aged fuel. Quantitative PCR (qPCR) was used to measure the abundance of rpoB, alkB, cat23, and nosZ in soils containing SAB diesel. Differences were observed between the abundance of genes in control soils versus soils containing weathered and fresh fuels. Typical dose-response curves were generated for genes in response to the presence of fresh fuel. In contrast, the response of these genes to the range of weathered fuel appeared to be due to dilution, rather than to the effect of the fuel on the microbial community. Changes in microbial genes in response to fresh contamination have potential as a sensitive measure of soil health and for assessments of the effect of fuel spills in polar soils. This will contribute to the development of remediation guidelines to assist in management

Polarized positron sources for the future linear colliders

International Nuclear Information System (INIS)

Chaikovska, I.

2012-01-01

This thesis introduces the polarized positron source as one of the key element of the future Linear Collider (LC). In this context, the different schemes of the polarized positron source are described highlighting the main issues in this technology. In particular, the main focus is on the Compton based positron source adopted by the CLIC as a preferred option for the future positron source upgrade. In this case, the circularly polarized high energy gamma rays resulting from Compton scattering are directed to a production target where an electromagnetic cascade gives rise to the production of positrons by e + -e - pair conversion. To increase the efficiency of the gamma ray production stage, a multiple collision point line integrated in energy recovery linac is proposed. The simulations of the positron production, capture and primary acceleration allow to estimate the positron production efficiency and provide a simple parametrization of the Compton based polarized positron source in the view of the future LC requirements. The storage ring based Compton source option, so-called Compton ring, is also described. The main constraint of this scheme is given by the beam dynamics resulting in the large energy spread and increased bunch length affecting the gamma ray production rate. An original theoretical contribution is shown to calculate the energy spread induced by Compton scattering. Moreover, an experiment to test the gamma ray production by Compton scattering using a state-of-art laser system developed at LAL has been conducted in the framework of the 'Mighty Laser' project at the ATF, KEK. The experimental layout as well as the main results obtained are discussed in details. The studies carried out in this thesis show that the polarized positron source based on Compton scattering is a promising candidate for the future LC polarized positron source. (author)

Nuclear spin polarized alkali beams (Li and Na): Production and acceleration

International Nuclear Information System (INIS)

Jaensch, H.; Becker, K.; Blatt, K.; Leucker, H.; Fick, D.

1987-01-01

Recent improvements of the Heidelberg source for polarized heavy ions (PSI) are described. By means of optical pumping in combination with the existing multipole separation magnet the beam figure of merit (polarization 2 x intensity) was doubled. 7 Li and 23 Na atomic beams can now be produced in pure hyperfine magnetic substates. Fast switching of the polarization is achieved by an adiabatic medium field transition. The hyperfine magnetic substate population is determined by laser-induced fluorescence spectroscopy. In routine operation atomic beams with nuclear polarization p α ≥0.85 (α=z, zz) are obtained. The acceleration of polarized 23 Na - ions by a 12 MV tandem accelerator introduces a new problem: the energy at the terminal stripper foil is not sufficient to produce a usable yield of naked ions. For partially stripped ions hyperfine interaction of the remaining electrons with the nuclear spin reduces the nuclear polarization. Using in addition the Heidelberg postaccelerator 23 Na 9+ beams of energies between 49 and 184 MeV were obtained with an alignment on target of P zz ≅0.45. 7 Li beams have also been accelerated up to 45 MeV with an alignment of P zz =0.69. (orig.)

Regulatory structures for gene therapy medicinal products in the European Union.

Science.gov (United States)

Klug, Bettina; Celis, Patrick; Carr, Melanie; Reinhardt, Jens

2012-01-01

Taking into account the complexity and technical specificity of advanced therapy medicinal products: (gene and cell therapy medicinal products and tissue engineered products), a dedicated European regulatory framework was needed. Regulation (EC) No. 1394/2007, the "ATMP Regulation" provides tailored regulatory principles for the evaluation and authorization of these innovative medicines. The majority of gene or cell therapy product development is carried out by academia, hospitals, and small- and medium-sized enterprises (SMEs). Thus, acknowledging the particular needs of these types of sponsors, the legislation also provides incentives for product development tailored to them. The European Medicines Agency (EMA) and, in particular, its Committee for Advanced Therapies (CAT) provide a variety of opportunities for early interaction with developers of ATMPs to enable them to have early regulatory and scientific input. An important tool to promote innovation and the development of new medicinal products by micro-, small-, and medium-sized enterprises is the EMA's SME initiative launched in December 2005 to offer financial and administrative assistance to smaller companies. The European legislation also foresees the involvement of stakeholders, such as patient organizations, in the development of new medicines. Considering that gene therapy medicinal products are developed in many cases for treatment of rare diseases often of monogenic origin, the involvement of patient organizations, which focus on rare diseases and genetic and congenital disorders, is fruitful. Two such organizations are represented in the CAT. Research networks play another important role in the development of gene therapy medicinal products. The European Commission is funding such networks through the EU Sixth Framework Program. Copyright © 2012 Elsevier Inc. All rights reserved.

Prompt charmonia production and polarization at LHC in the NRQCD with k{sub T}-factorization. Part I: ψ(2S) meson

Energy Technology Data Exchange (ETDEWEB)

Baranov, S. P. [P.N. Lebedev Physics Institute, 119991, Moscow (Russian Federation); Lipatov, A. V., E-mail: lipatov@theory.sinp.msu.ru [Skobeltsyn Institute of Nuclear Physics, Lomonosov Moscow State University, 119991, Moscow (Russian Federation); Joint Institute for Nuclear Research, 141980, Dubna, Moscow Region (Russian Federation); Zotov, N. P., E-mail: 4lipatov@theory.sinp.msu.ru [Skobeltsyn Institute of Nuclear Physics, Lomonosov Moscow State University, 119991, Moscow (Russian Federation)

2015-09-28

In the framework of the k{sub T}-factorization approach, the production and polarization of prompt ψ(2S) mesons in pp collisions at LHC energies is studied. Our consideration is based on the non-relativistic QCD formalism for bound states and off-shell amplitudes for hard partonic subprocesses. The transverse momentum dependent (unintegrated) gluon densities in a proton were derived from the Ciafaloni–Catani–Fiorani–Marchesini evolution equation or, alternatively, were chosen in accordance with the Kimber–Martin–Ryskin prescription. The non-perturbative color-octet matrix elements were first deduced from the fits to the latest CMS data on ψ(2S) transverse momentum distributions and then applied to describe the ATLAS and LHCb data on ψ(2S) production and polarization at √s=7 TeV. We perform the estimation of the polarization parameters λ{sub θ}, λ{sub ϕ}, and λ{sub θϕ}, which determine the ψ(2S) spin density matrix and demonstrate that taking into account the off-shellness of the initial gluons in the color-octet contributions leads to unpolarized ψ(2S) production at high transverse momenta, in qualitative agreement with the LHC data.

Prompt charmonia production and polarization at LHC in the NRQCD with k{sub T}-factorization. Pt. I. ψ(2S) meson

Energy Technology Data Exchange (ETDEWEB)

Baranov, S.P. [P.N. Lebedev Physics Instiute, Moscow (Russian Federation); National Research Univ., Moscow (Russian Federation). Higher School of Economics; Lipatov, A.V. [Moscow State Univ. (Russian Federation). Skobeltsyn Inst. of Nuclear Physics; Joint Institute for Nuclear Research, Dubna (Russian Federation); Zotov, N.P. [Moscow State Univ. (Russian Federation). Skobeltsyn Inst. of Nuclear Physics

2015-09-15

In the framework of k{sub t}-factorization approach, the production and polarization of prompt ψ(2S) mesons in pp collisions at the LHC energies is studied. Our consideration is based on the non-relativistic QCD formalism for bound states and off-shell amplitudes for hard partonic subprocesses. The transverse momentum dependent (unintegrated) gluon densities in a proton were derived from Ciafaloni-Catani-Fiorani-Marchesini evolution equation or, alternatively, were chosen in accordance with Kimber-Martin-Ryskin prescription. The non-perturbative color-octet matrix elements were first deduced from the fits to the latest CMS data on ψ(2S) transverse momentum distributions and then applied to describe the ATLAS and LHCb data on ψ(2S) production and polarization at √(s)=7 TeV. We perform the estimation of polarization parameters λ{sub θ}, λ{sub φ} and λ{sub θφ} which determine ψ(2S) spin density matrix and demonstrate that taking into account the off-shellness of initial gluons in the color-octet contributions leads to unpolarized ψ(2S) production at high transverse momenta, that is in qualitative agreement with the LHC data.

Polarization phenomena in isobar production by a weak neutral current

International Nuclear Information System (INIS)

Esajbegyan, S.V.; Matinyan, S.G.

1977-01-01

Polarization phenomen connected with weak neutral currents producing the isobar in the lepton-nucleon scattering are considered. It is shown that measurement of the angular distribution of π mesons so as to detect also the longitudinally polarized decay nucleon can provide usefull information about validity of various models including a weak neutral current

Candidate genes for drought tolerance and improved productivity in ...

Indian Academy of Sciences (India)

Madhu

tropics. Improving drought tolerance and productivity is one of the most difficult tasks for cereal breeders. The diffi- culty arises from the diverse strategies adopted by plants themselves to combat drought stress depending on the timing,. Candidate genes for drought tolerance and improved productivity in rice (Oryza sativa L.).

High-x sub T single-spin asymmetry in. pi. sup 0 and. eta. production at x sub F =0 by 200 GeV polarized antiprotons and protons

Energy Technology Data Exchange (ETDEWEB)

Adams, D L; Akchurin, N; Belikov, N I; Bystricky, J; Corcoran, M D; Cossairt, J D; Cranshaw, J; Derevschikov, A A; En' yo, H; Funahashi, H; Goto, Y; Grachov, O A; Grosnick, D P; Hill, D A; Imai, K; Itow, Y; Iwatani, K; Krueger, K W; Kuroda, K; Laghai, M; Lehar, F; Lesquen, A de; Lopiano, D; Luehring, F C; Maki, T; Makino, S; Masaike, A; Matulenko, Yu A; Meschanin, A P; Michalowicz, A; Miller, D H; Miyake, K; Nagamine, T; Nessi-Tedaldi, F; Nessi, M; Nguyen, C; Nurushev, S B; Ohashi, Y; Onel, Y; Patalakha, D I; Pauletta, G; Penzo, A; Read, A L; Roberts, J B; Van Rossum, L; Rykov, V L; Saito, N; Salvato, G; Schiavon, P; Skeens, J; Solovyanov, V L; Spinka, H; Takashima, R; Takeutchi, F; Tamura, N; Tanaka, N; Underwood, D G; Vasiliev, A N; Villari, A; White, J L; Yamashita, S; Yokosawa, A; Yoshida, T; Zanetti, A [T.W. Bonner Nuclear Lab., Rice Univ., Houston, TX (United States) Dept. of Physics, Univ. Iowa, Iowa City, IA (Unite; FNAL E704 Collaboration

1992-02-20

A measurement of the single-spin asymmetry A{sub N} in p{up arrow}+p{yields}{pi}{sup 0}+X at 200 GeV with x{sub F}=0 shows a transition in the production process from a 'low-x{sub T}' regime with A{sub N}=0, through an intermediate region of negative asymmetry, to a 'high-x{sub T}' regime with A{sub N}>0.3. This transition occurs at x{sub T}{approx equal}0.4 and is consistent with x{sub T}-scaling of A{sub N} in pion production using polarized beams or targets from {radical}-s=5.2 to 19.4 GeV. Results for A{sub N} in {eta} production by polarized protons and in {pi}{sup 0} production by polarized antiprotons are also presented. (orig.).

Escherichia coli yjjPB genes encode a succinate transporter important for succinate production.

Science.gov (United States)

Fukui, Keita; Nanatani, Kei; Hara, Yoshihiko; Yamakami, Suguru; Yahagi, Daiki; Chinen, Akito; Tokura, Mitsunori; Abe, Keietsu

2017-09-01

Under anaerobic conditions, Escherichia coli produces succinate from glucose via the reductive tricarboxylic acid cycle. To date, however, no genes encoding succinate exporters have been established in E. coli. Therefore, we attempted to identify genes encoding succinate exporters by screening an E. coli MG1655 genome library. We identified the yjjPB genes as candidates encoding a succinate transporter, which enhanced succinate production in Pantoea ananatis under aerobic conditions. A complementation assay conducted in Corynebacterium glutamicum strain AJ110655ΔsucE1 demonstrated that both YjjP and YjjB are required for the restoration of succinate production. Furthermore, deletion of yjjPB decreased succinate production in E. coli by 70% under anaerobic conditions. Taken together, these results suggest that YjjPB constitutes a succinate transporter in E. coli and that the products of both genes are required for succinate export.

Quarkonium production and polarization in pp collisions with the CMS detector

CERN Document Server

Argiro, Stefano

2014-01-01

Studies of the production of heavy quarkonium states are very important to improve our understanding of QCD and hadron formation, given that the heavy quark masses allow the application of theoretical tools less sensitive to nonperturbative effects.Thanks to a dedicated dimuon trigger strategy, combined with the record-level energy and luminosity provided by the LHC, the CMS experiment could collect large samples of pp collisions at 7 and 8 TeV, including quarkonium states decaying in the dimuon channel. This allowed the CMS collaboration to perform a series of systematic measurements in quarkonium production physics, including double-differential cross sections and polarizations, as a function of rapidity and pT, for five S-wave quarkonia J/psi, psi(2S), Y(1S), Y(2S), and Y(3S). Some of these measurements extend well above pT ~ 50 GeV, probing regions of very high pT/mass, where the theory calculations are supposed to be the most reliable. Thanks to its high-granularity silicon tracker, CMS can reconstruct...

Uses of laser optical pumping to produce polarized ion beams

International Nuclear Information System (INIS)

Anderson, L.W.

1983-01-01

Laser optical pumping can be used to produce polarized alkali atom beams or polarized alkali vapor targets. Polarized alkali atom beams can be converted into polarized alkali ion beams, and polarized alkali vapor targets can be used to produce polarized H - or 3 He - ion beams. In this paper the authors discuss how the polarized alkali atom beams and polarized alkali vapor targets are used to produce polarized ion beams with emphasis on the production of polarized negative ion beams

Mean energy polarized neutron source

International Nuclear Information System (INIS)

Aleshin, V.A.; Zaika, N.I.; Kolotyj, V.V.; Prokopenko, V.S.; Semenov, V.S.

1988-01-01

Physical bases and realization scheme of a pulsed source of polarized neutrons with the energy of up to 75 MeV are described. The source comprises polarized deuteron source, transport line, low-energy ion and axial injector to the accelerator, U-240 isochronous cyclotron, targets for polarized neutron production, accelerated deuteron transport line and flight bases. The pulsed source of fast neutrons with the energy of up to 75 MeV can provide for highly polarized neutron beams with the intensity by 2-3 orders higher than in the most perfect source of this range which allows one to perform various experiments with high efficiency and energy resolution. 9 refs.; 1 fig

Measurements of double-helicity asymmetries in inclusive J /ψ production in longitudinally polarized p +p collisions at √{s }=510 GeV

Science.gov (United States)

Adare, A.; Aidala, C.; Ajitanand, N. N.; Akiba, Y.; Akimoto, R.; Alfred, M.; Apadula, N.; Aramaki, Y.; Asano, H.; Atomssa, E. T.; Awes, T. C.; Azmoun, B.; Babintsev, V.; Bai, M.; Bandara, N. S.; Bannier, B.; Barish, K. N.; Bathe, S.; Bazilevsky, A.; Beaumier, M.; Beckman, S.; Belmont, R.; Berdnikov, A.; Berdnikov, Y.; Black, D.; Blau, D. S.; Bok, J. S.; Boyle, K.; Brooks, M. L.; Bryslawskyj, J.; Buesching, H.; Bumazhnov, V.; Campbell, S.; Chen, C.-H.; Chi, C. Y.; Chiu, M.; Choi, I. J.; Choi, J. B.; Chujo, T.; Citron, Z.; Csanád, M.; Csörgő, T.; Danley, T. W.; Datta, A.; Daugherity, M. S.; David, G.; Deblasio, K.; Dehmelt, K.; Denisov, A.; Deshpande, A.; Desmond, E. J.; Ding, L.; Dion, A.; Diss, P. B.; Do, J. H.; Drees, A.; Drees, K. A.; Durham, J. M.; Durum, A.; Enokizono, A.; En'yo, H.; Esumi, S.; Fadem, B.; Feege, N.; Fields, D. E.; Finger, M.; Finger, M.; Fokin, S. L.; Frantz, J. E.; Franz, A.; Frawley, A. D.; Gal, C.; Gallus, P.; Garg, P.; Ge, H.; Giordano, F.; Glenn, A.; Goto, Y.; Grau, N.; Greene, S. V.; Grosse Perdekamp, M.; Gu, Y.; Gunji, T.; Guragain, H.; Hachiya, T.; Haggerty, J. S.; Hahn, K. I.; Hamagaki, H.; Hamilton, H. F.; Han, S. Y.; Hanks, J.; Hasegawa, S.; Haseler, T. O. S.; Hashimoto, K.; He, X.; Hemmick, T. K.; Hill, J. C.; Hollis, R. S.; Homma, K.; Hong, B.; Hoshino, T.; Hotvedt, N.; Huang, J.; Huang, S.; Ikeda, Y.; Imai, K.; Imazu, Y.; Inaba, M.; Iordanova, A.; Isenhower, D.; Ivanishchev, D.; Jacak, B. V.; Jeon, S. J.; Jezghani, M.; Jia, J.; Jiang, X.; Johnson, B. M.; Joo, E.; Joo, K. S.; Jouan, D.; Jumper, D. S.; Kanda, S.; Kang, J. H.; Kang, J. S.; Kawall, D.; Kazantsev, A. V.; Key, J. A.; Khachatryan, V.; Khanzadeev, A.; Kihara, K.; Kim, C.; Kim, D. H.; Kim, D. J.; Kim, E.-J.; Kim, G. W.; Kim, H.-J.; Kim, M.; Kim, Y. K.; Kimelman, B.; Kistenev, E.; Kitamura, R.; Klatsky, J.; Kleinjan, D.; Kline, P.; Koblesky, T.; Kofarago, M.; Komkov, B.; Koster, J.; Kotov, D.; Kurita, K.; Kurosawa, M.; Kwon, Y.; Lacey, R.; Lajoie, J. G.; Lebedev, A.; Lee, K. B.; Lee, S.; Lee, S. H.; Leitch, M. J.; Leitgab, M.; Li, X.; Lim, S. H.; Liu, M. X.; Lynch, D.; Makdisi, Y. I.; Makek, M.; Manion, A.; Manko, V. I.; Mannel, E.; McCumber, M.; McGaughey, P. L.; McGlinchey, D.; McKinney, C.; Meles, A.; Mendoza, M.; Meredith, B.; Miake, Y.; Mignerey, A. C.; Miller, A. J.; Milov, A.; Mishra, D. K.; Mitchell, J. T.; Miyasaka, S.; Mizuno, S.; Mohanty, A. K.; Montuenga, P.; Moon, T.; Morrison, D. P.; Moukhanova, T. V.; Murakami, T.; Murata, J.; Mwai, A.; Nagamiya, S.; Nagashima, K.; Nagle, J. L.; Nagy, M. I.; Nakagawa, I.; Nakagomi, H.; Nakano, K.; Nattrass, C.; Netrakanti, P. K.; Nihashi, M.; Niida, T.; Nishimura, S.; Nouicer, R.; Novák, T.; Novitzky, N.; Nyanin, A. S.; O'Brien, E.; Ogilvie, C. A.; Orjuela Koop, J. D.; Osborn, J. D.; Oskarsson, A.; Ozawa, K.; Pak, R.; Pantuev, V.; Papavassiliou, V.; Park, J. S.; Park, S.; Pate, S. F.; Patel, L.; Patel, M.; Peng, J.-C.; Perepelitsa, D. V.; Perera, G. D. N.; Peressounko, D. Yu.; Perry, J.; Petti, R.; Pinkenburg, C.; Pinson, R.; Pisani, R. P.; Purschke, M. L.; Rak, J.; Ramson, B. J.; Ravinovich, I.; Read, K. F.; Reynolds, D.; Riabov, V.; Riabov, Y.; Rinn, T.; Riveli, N.; Roach, D.; Rolnick, S. D.; Rosati, M.; Rowan, Z.; Rubin, J. G.; Sahlmueller, B.; Saito, N.; Sakaguchi, T.; Sako, H.; Samsonov, V.; Sarsour, M.; Sato, S.; Sawada, S.; Schaefer, B.; Schmoll, B. K.; Sedgwick, K.; Seele, J.; Seidl, R.; Sen, A.; Seto, R.; Sett, P.; Sexton, A.; Sharma, D.; Shein, I.; Shibata, T.-A.; Shigaki, K.; Shimomura, M.; Shukla, P.; Sickles, A.; Silva, C. L.; Silvermyr, D.; Singh, B. K.; Singh, C. P.; Singh, V.; Slunečka, M.; Snowball, M.; Soltz, R. A.; Sondheim, W. E.; Sorensen, S. P.; Sourikova, I. V.; Stankus, P. W.; Stepanov, M.; Stoll, S. P.; Sugitate, T.; Sukhanov, A.; Sumita, T.; Sun, J.; Sziklai, J.; Takahara, A.; Taketani, A.; Tanida, K.; Tannenbaum, M. J.; Tarafdar, S.; Taranenko, A.; Tieulent, R.; Timilsina, A.; Todoroki, T.; Tomášek, M.; Torii, H.; Towell, C. L.; Towell, M.; Towell, R.; Towell, R. S.; Tserruya, I.; van Hecke, H. W.; Vargyas, M.; Velkovska, J.; Virius, M.; Vrba, V.; Vznuzdaev, E.; Wang, X. R.; Watanabe, D.; Watanabe, Y.; Watanabe, Y. S.; Wei, F.; Whitaker, S.; White, A. S.; Wolin, S.; Woody, C. L.; Wysocki, M.; Xia, B.; Xue, L.; Yalcin, S.; Yamaguchi, Y. L.; Yanovich, A.; Yoo, J. H.; Yoon, I.; Younus, I.; Yu, H.; Yushmanov, I. E.; Zajc, W. A.; Zelenski, A.; Zhou, S.; Zou, L.; Phenix Collaboration

2016-12-01

We report the double-helicity asymmetry, ALL J /ψ, in inclusive J /ψ production at forward rapidity as a function of transverse momentum pT and rapidity |y |. The data analyzed were taken during √{s }=510 GeV longitudinally polarized p +p collisions at the Relativistic Heavy Ion Collider in the 2013 run using the PHENIX detector. At this collision energy, J /ψ particles are predominantly produced through gluon-gluon scatterings, thus ALL J /ψ is sensitive to the gluon polarization inside the proton. We measured ALL J /ψ by detecting the decay daughter muon pairs μ+μ- within the PHENIX muon spectrometers in the rapidity range 1.2 <|y |<2.2 . In this kinematic range, we measured the ALL J /ψ to be 0.012 ±0.010 (stat) ±0.003 (syst). The ALL J /ψ can be expressed to be proportional to the product of the gluon polarization distributions at two distinct ranges of Bjorken x : one at moderate range x ≈5 ×10-2 where recent data of jet and π0 double helicity spin asymmetries have shown evidence for significant gluon polarization, and the other one covering the poorly known small-x region x ≈2 ×10-3. Thus our new results could be used to further constrain the gluon polarization for x <5 ×10-2.

Pulsed diode source of polarized ions

International Nuclear Information System (INIS)

Katzenstein, J.; Rostoker, N.

1983-01-01

The advantages of polarized nuclei for fusion reactors have recently been described. We propose a pulsed source of polarized nuclei that consists of an ion diode with a polarized anode. With magnetic resonance techniques the nuclear spins of the protons of solid NH 3 can be made about 90 to 95% polarized. This material would be used for the anode. The diode would be pulsed with a voltage of 1-200K-volts for 1-2 μ sec. Flashover of the anode produces a surface plasma from which the polarized protons would be extracted to form a beam. Depolarization could be detected by comparing reaction cross sections and/or distribution of reaction products with similar results for unpolarized beams

Longitudinal double-spin asymmetry and cross section for inclusive jet production in polarized proton collisions at square root of s = 200 GeV.

Science.gov (United States)

Abelev, B I; Aggarwal, M M; Ahammed, Z; Amonett, J; Anderson, B D; Anderson, M; Arkhipkin, D; Averichev, G S; Bai, Y; Balewski, J; Barannikova, O; Barnby, L S; Baudot, J; Bekele, S; Belaga, V V; Bellingeri-Laurikainen, A; Bellwied, R; Benedosso, F; Bhardwaj, S; Bhasin, A; Bhati, A K; Bichsel, H; Bielcik, J; Bielcikova, J; Bland, L C; Blyth, S-L; Bonner, B E; Botje, M; Bouchet, J; Brandin, A V; Bravar, A; Burton, T P; Bystersky, M; Cadman, R V; Cai, X Z; Caines, H; Sánchez, M Calderón de la Barca; Castillo, J; Catu, O; Cebra, D; Chajecki, Z; Chaloupka, P; Chattopadhyay, S; Chen, H F; Chen, J H; Cheng, J; Cherney, M; Chikanian, A; Christie, W; Coffin, J P; Cormier, T M; Cosentino, M R; Cramer, J G; Crawford, H J; Das, D; Das, S; Dash, S; Daugherity, M; de Moura, M M; Dedovich, T G; Dephillips, M; Derevschikov, A A; Didenko, L; Dietel, T; Djawotho, P; Dogra, S M; Dong, W J; Dong, X; Draper, J E; Du, F; Dunin, V B; Dunlop, J C; Mazumdar, M R Dutta; Eckardt, V; Edwards, W R; Efimov, L G; Emelianov, V; Engelage, J; Eppley, G; Erazmus, B; Estienne, M; Fachini, P; Fatemi, R; Fedorisin, J; Filip, P; Finch, E; Fine, V; Fisyak, Y; Fu, J; Gagliardi, C A; Gaillard, L; Ganti, M S; Ghazikhanian, V; Ghosh, P; Gonzalez, J E; Gorbunov, Y G; Gos, H; Grebenyuk, O; Grosnick, D; Guertin, S M; Guimaraes, K S F F; Gupta, N; Gutierrez, T D; Haag, B; Hallman, T J; Hamed, A; Harris, J W; He, W; Heinz, M; Henry, T W; Hepplemann, S; Hippolyte, B; Hirsch, A; Hjort, E; Hoffman, A M; Hoffmann, G W; Horner, M J; Huang, H Z; Huang, S L; Hughes, E W; Humanic, T J; Igo, G; Jacobs, P; Jacobs, W W; Jakl, P; Jia, F; Jiang, H; Jones, P G; Judd, E G; Kabana, S; Kang, K; Kapitan, J; Kaplan, M; Keane, D; Kechechyan, A; Khodyrev, V Yu; Kim, B C; Kiryluk, J; Kisiel, A; Kislov, E M; Klein, S R; Kocoloski, A; Koetke, D D; Kollegger, T; Kopytine, M; Kotchenda, L; Kouchpil, V; Kowalik, K L; Kramer, M; Kravtsov, P; Kravtsov, V I; Krueger, K; Kuhn, C; Kulikov, A I; Kumar, A; Kuznetsov, A A; Lamont, M A C; Landgraf, J M; Lange, S; LaPointe, S; Laue, F; Lauret, J; Lebedev, A; Lednicky, R; Lee, C-H; Lehocka, S; LeVine, M J; Li, C; Li, Q; Li, Y; Lin, G; Lin, X; Lindenbaum, S J; Lisa, M A; Liu, F; Liu, H; Liu, J; Liu, L; Liu, Z; Ljubicic, T; Llope, W J; Long, H; Longacre, R S; Love, W A; Lu, Y; Ludlam, T; Lynn, D; Ma, G L; Ma, J G; Ma, Y G; Magestro, D; Mahapatra, D P; Majka, R; Mangotra, L K; Manweiler, R; Margetis, S; Markert, C; Martin, L; Matis, H S; Matulenko, Yu A; McClain, C J; McShane, T S; Melnick, Yu; Meschanin, A; Millane, J; Miller, M L; Minaev, N G; Mioduszewski, S; Mironov, C; Mischke, A; Mishra, D K; Mitchell, J; Mohanty, B; Molnar, L; Moore, C F; Morozov, D A; Munhoz, M G; Nandi, B K; Nattrass, C; Nayak, T K; Nelson, J M; Netrakanti, P K; Nogach, L V; Nurushev, S B; Odyniec, G; Ogawa, A; Okorokov, V; Oldenburg, M; Olson, D; Pachr, M; Pal, S K; Panebratsev, Y; Panitkin, S Y; Pavlinov, A I; Pawlak, T; Peitzmann, T; Perevoztchikov, V; Perkins, C; Peryt, W; Phatak, S C; Picha, R; Planinic, M; Pluta, J; Poljak, N; Porile, N; Porter, J; Poskanzer, A M; Potekhin, M; Potrebenikova, E; Potukuchi, B V K S; Prindle, D; Pruneau, C; Putschke, J; Rakness, G; Raniwala, R; Raniwala, S; Ray, R L; Razin, S V; Reinnarth, J; Relyea, D; Ridiger, A; Ritter, H G; Roberts, J B; Rogachevskiy, O V; Romero, J L; Rose, A; Roy, C; Ruan, L; Russcher, M J; Sahoo, R; Sakuma, T; Salur, S; Sandweiss, J; Sarsour, M; Sazhin, P S; Schambach, J; Scharenberg, R P; Schmitz, N; Seger, J; Selyuzhenkov, I; Seyboth, P; Shabetai, A; Shahaliev, E; Shao, M; Sharma, M; Shen, W Q; Shimanskiy, S S; Sichtermann, E P; Simon, F; Singaraju, R N; Smirnov, N; Snellings, R; Sood, G; Sorensen, P; Sowinski, J; Speltz, J; Spinka, H M; Srivastava, B; Stadnik, A; Stanislaus, T D S; Stock, R; Stolpovsky, A; Strikhanov, M; Stringfellow, B; Suaide, A A P; Sugarbaker, E; Sumbera, M; Sun, Z; Surrow, B; Swanger, M; Symons, T J M; Szanto de Toledo, A; Tai, A; Takahashi, J; Tang, A H; Tarnowsky, T; Thein, D; Thomas, J H; Timmins, A R; Timoshenko, S; Tokarev, M; Trainor, T A; Trentalange, S; Tribble, R E; Tsai, O D; Ulery, J; Ullrich, T; Underwood, D G; Buren, G Van; van der Kolk, N; van Leeuwen, M; Molen, A M Vander; Varma, R; Vasilevski, I M; Vasiliev, A N; Vernet, R; Vigdor, S E; Viyogi, Y P; Vokal, S; Voloshin, S A; Waggoner, W T; Wang, F; Wang, G; Wang, J S; Wang, X L; Wang, Y; Watson, J W; Webb, J C; Westfall, G D; Wetzler, A; Whitten, C; Wieman, H; Wissink, S W; Witt, R; Wood, J; Wu, J; Xu, N; Xu, Q H; Xu, Z; Yepes, P; Yoo, I-K; Yurevich, V I; Zhan, W; Zhang, H; Zhang, W M; Zhang, Y; Zhang, Z P; Zhao, Y; Zhong, C; Zoulkarneev, R; Zoulkarneeva, Y; Zubarev, A N; Zuo, J X

2006-12-22

We report a measurement of the longitudinal double-spin asymmetry A(LL) and the differential cross section for inclusive midrapidity jet production in polarized proton collisions at square root of s = 200 GeV. The cross section data cover transverse momenta 5 < pT < 50 GeV/c and agree with next-to-leading order perturbative QCD evaluations. The A(LL) data cover 5 < pT < 17 GeV/c and disfavor at 98% C.L. maximal positive gluon polarization in the polarized nucleon.

Production of polarized negative deuterium ion beam with dual optical pumping in KEK

Energy Technology Data Exchange (ETDEWEB)

Kinsho, M.; Ikegami, K.; Takagi, A. [National Lab. for High Energy Physics, Tsukuba, Ibaraki (Japan); Mori, Y.

1997-02-01

To obtain highly nuclear-spin vector polarized negative deuterium ion beam, a dual optically pumped polarized negative deuterium ion source has been developed at KEK. It is possible to select a pure nuclear-spin state with this scheme, and negative deuterium ion beam with 100% nuclear-spin vector polarization can be produced in principle. We have obtained about 70% of nuclear-spin vector polarized negative deuterium ion beam so far. This result may open up a new possibilities for the optically pumped polarized ion source. (author)

Genetic interactions between planar cell polarity genes cause diverse neural tube defects in mice

Directory of Open Access Journals (Sweden)

Jennifer N. Murdoch

2014-10-01

Full Text Available Neural tube defects (NTDs are among the commonest and most severe forms of developmental defect, characterized by disruption of the early embryonic events of central nervous system formation. NTDs have long been known to exhibit a strong genetic dependence, yet the identity of the genetic determinants remains largely undiscovered. Initiation of neural tube closure is disrupted in mice homozygous for mutations in planar cell polarity (PCP pathway genes, providing a strong link between NTDs and PCP signaling. Recently, missense gene variants have been identified in PCP genes in humans with NTDs, although the range of phenotypes is greater than in the mouse mutants. In addition, the sequence variants detected in affected humans are heterozygous, and can often be detected in unaffected individuals. It has been suggested that interactions between multiple heterozygous gene mutations cause the NTDs in humans. To determine the phenotypes produced in double heterozygotes, we bred mice with all three pairwise combinations of Vangl2Lp, ScribCrc and Celsr1Crsh mutations, the most intensively studied PCP mutants. The majority of double-mutant embryos had open NTDs, with the range of phenotypes including anencephaly and spina bifida, therefore reflecting the defects observed in humans. Strikingly, even on a uniform genetic background, variability in the penetrance and severity of the mutant phenotypes was observed between the different double-heterozygote combinations. Phenotypically, Celsr1Crsh;Vangl2Lp;ScribCrc triply heterozygous mutants were no more severe than doubly heterozygous or singly homozygous mutants. We propose that some of the variation between double-mutant phenotypes could be attributed to the nature of the protein disruption in each allele: whereas ScribCrc is a null mutant and produces no Scrib protein, Celsr1Crsh and Vangl2Lp homozygotes both express mutant proteins, consistent with dominant effects. The variable outcomes of these genetic

Genomic evidence for island population conversion resolves conflicting theories of polar bear evolution.

Science.gov (United States)

Cahill, James A; Green, Richard E; Fulton, Tara L; Stiller, Mathias; Jay, Flora; Ovsyanikov, Nikita; Salamzade, Rauf; St John, John; Stirling, Ian; Slatkin, Montgomery; Shapiro, Beth

2013-01-01

Despite extensive genetic analysis, the evolutionary relationship between polar bears (Ursus maritimus) and brown bears (U. arctos) remains unclear. The two most recent comprehensive reports indicate a recent divergence with little subsequent admixture or a much more ancient divergence followed by extensive admixture. At the center of this controversy are the Alaskan ABC Islands brown bears that show evidence of shared ancestry with polar bears. We present an analysis of genome-wide sequence data for seven polar bears, one ABC Islands brown bear, one mainland Alaskan brown bear, and a black bear (U. americanus), plus recently published datasets from other bears. Surprisingly, we find clear evidence for gene flow from polar bears into ABC Islands brown bears but no evidence of gene flow from brown bears into polar bears. Importantly, while polar bears contributed bear, they contributed 6.5% of the X chromosome. The magnitude of sex-biased polar bear ancestry and the clear direction of gene flow suggest a model wherein the enigmatic ABC Island brown bears are the descendants of a polar bear population that was gradually converted into brown bears via male-dominated brown bear admixture. We present a model that reconciles heretofore conflicting genetic observations. We posit that the enigmatic ABC Islands brown bears derive from a population of polar bears likely stranded by the receding ice at the end of the last glacial period. Since then, male brown bear migration onto the island has gradually converted these bears into an admixed population whose phenotype and genotype are principally brown bear, except at mtDNA and X-linked loci. This process of genome erosion and conversion may be a common outcome when climate change or other forces cause a population to become isolated and then overrun by species with which it can hybridize.

Genomic evidence for island population conversion resolves conflicting theories of polar bear evolution.

Directory of Open Access Journals (Sweden)

James A Cahill

Full Text Available Despite extensive genetic analysis, the evolutionary relationship between polar bears (Ursus maritimus and brown bears (U. arctos remains unclear. The two most recent comprehensive reports indicate a recent divergence with little subsequent admixture or a much more ancient divergence followed by extensive admixture. At the center of this controversy are the Alaskan ABC Islands brown bears that show evidence of shared ancestry with polar bears. We present an analysis of genome-wide sequence data for seven polar bears, one ABC Islands brown bear, one mainland Alaskan brown bear, and a black bear (U. americanus, plus recently published datasets from other bears. Surprisingly, we find clear evidence for gene flow from polar bears into ABC Islands brown bears but no evidence of gene flow from brown bears into polar bears. Importantly, while polar bears contributed <1% of the autosomal genome of the ABC Islands brown bear, they contributed 6.5% of the X chromosome. The magnitude of sex-biased polar bear ancestry and the clear direction of gene flow suggest a model wherein the enigmatic ABC Island brown bears are the descendants of a polar bear population that was gradually converted into brown bears via male-dominated brown bear admixture. We present a model that reconciles heretofore conflicting genetic observations. We posit that the enigmatic ABC Islands brown bears derive from a population of polar bears likely stranded by the receding ice at the end of the last glacial period. Since then, male brown bear migration onto the island has gradually converted these bears into an admixed population whose phenotype and genotype are principally brown bear, except at mtDNA and X-linked loci. This process of genome erosion and conversion may be a common outcome when climate change or other forces cause a population to become isolated and then overrun by species with which it can hybridize.

The HP0256 gene product is involved in motility and cell envelope architecture of Helicobacter pylori

LENUS (Irish Health Repository)

Douillard, Francois P

2010-04-08

Abstract Background Helicobacter pylori is the causative agent for gastritis, and peptic and duodenal ulcers. The bacterium displays 5-6 polar sheathed flagella that are essential for colonisation and persistence in the gastric mucosa. The biochemistry and genetics of flagellar biogenesis in H. pylori has not been fully elucidated. Bioinformatics analysis suggested that the gene HP0256, annotated as hypothetical, was a FliJ homologue. In Salmonella, FliJ is a chaperone escort protein for FlgN and FliT, two proteins that themselves display chaperone activity for components of the hook, the rod and the filament. Results Ablation of the HP0256 gene in H. pylori significantly reduced motility. However, flagellin and hook protein synthesis was not affected in the HP0256 mutant. Transmission electron transmission microscopy revealed that the HP0256 mutant cells displayed a normal flagellum configuration, suggesting that HP0256 was not essential for assembly and polar localisation of the flagella in the cell. Interestingly, whole genome microarrays of an HP0256 mutant revealed transcriptional changes in a number of genes associated with the flagellar regulon and the cell envelope, such as outer membrane proteins and adhesins. Consistent with the array data, lack of the HP0256 gene significantly reduced adhesion and the inflammatory response in host cells. Conclusions We conclude that HP0256 is not a functional counterpart of FliJ in H. pylori. However, it is required for full motility and it is involved, possibly indirectly, in expression of outer membrane proteins and adhesins involved in pathogenesis and adhesion.

Radiochemical identification of the kil gene product of bacteriophage lambda

International Nuclear Information System (INIS)

Greer, H.; Ausubel, F.M.

1979-01-01

The coliphage lambda kil gene product has been identified using a differential labeling technique . The kil gene polypeptide has a molecular weight of about 16,000, as determined by sodium dodecyl sulfate-polyacrylamide gel electrophoresis. Gel filtration of the kil protein indicates that it may exist as a tetramer in native form

Production of highly polarized 3He using spectrally narrowed diode laser array bars

International Nuclear Information System (INIS)

Chann, B.; Babcock, E.; Anderson, L.W.; Walker, T.G.; Chen, W.C.; Smith, T.B.; Thompson, A.K.; Gentile, T.R.

2003-01-01

We have produced 70%-75% 3 He polarization by spin-exchange optical pumping in cells ≅100 cm 3 in volume. The polarization achieved is consistent with known spin-exchange and spin-relaxation rates, but only when the recently discovered temperature dependence of 3 He relaxation is included. Absolute 3 He polarization measurements were performed using two different methods in two different laboratories. The results were obtained with either a spectrally narrowed laser or one type of broadband laser. Based on tests of several larger cells at pressures near 1 bar, we find that the power required to reach the same polarization is typically three times lower for the spectrally narrowed laser. This last result indicates that spectrally narrowed lasers will be important for obtaining the highest polarization in large volume neutron spin filters. Polarization in excess of 55% as obtained in cells up to 640 cm 3 in volume and 70% polarization is anticipated with available increases in spectrally narrowed laser power

$\\Lambda$ and $\\bar{\\Lambda}$ polarization at COMPASS

CERN Document Server

Kang, Donghee

2010-01-01

At the COMPASS experiment $\\Lambda$ and $\\bar{\\Lambda}$ particles are produced with high statistics in deep inelastic scattering (DIS) processes of 160 GeV/c polarized muons. Since both, beam and target, are polarized, various studies on the $\\Lambda$ polarization are possible. We present results on the longitudinal polarization transfer from muons to $\\Lambda$ hyperons produced by scattering off an unpolarized isoscalar target and preliminary results on the transverse $\\Lambda$ polarization with a transversely polarized proton target. The $\\Lambda$ and $\\bar{\\Lambda}$ polarization can be studied by measuring the acceptance corrected angular distribution of its decay products. The longitudinal spin transfers to $\\Lambda$ and $\\bar{\\Lambda}$ produced in the current fragmentation region exhibit different behaviours as a function of $x_{Bj}$ and $x_{F}$. The $x_{Bj}$ and $x_{F}$ dependences of $\\Lambda$ polarization are compatible with zero, while $\\bar{\\Lambda}$ polarization tends to increase with $x_{F}$. Info...

The polarity protein Par6 is coupled to the microtubule network during molluscan early embryogenesis

Energy Technology Data Exchange (ETDEWEB)

Homma, Taihei [Department of Biophysics and Biochemistry, Graduate School of Science, The University of Tokyo, Hongo, Bunkyo-ku, Tokyo 113-0033 (Japan); Shimizu, Miho [Kuroda Chiromorphology Team, ERATO-SORST, JST, Komaba, Meguro-ku, Tokyo 153-8902 (Japan); Kuroda, Reiko, E-mail: ckuroda@mail.ecc.u-tokyo.ac.jp [Department of Biophysics and Biochemistry, Graduate School of Science, The University of Tokyo, Hongo, Bunkyo-ku, Tokyo 113-0033 (Japan); Kuroda Chiromorphology Team, ERATO-SORST, JST, Komaba, Meguro-ku, Tokyo 153-8902 (Japan); Department of Life Sciences, Graduate School of Arts and Sciences, The University of Tokyo, Komaba, Meguro-ku, Tokyo 153-8902 (Japan)

2011-01-07

Research highlights: {yields} The cDNAs encoding Par6 and aPKC homologues were cloned from the snail Lymnaea stagnalis. {yields} L. stagnalis Par6 directly interacts with tubulin and microtubules and localizes to the microtubule cytoskeleton during the early embryogenesis. {yields} Identical sequence and localization of LsPar6 for the dextral and the sinistral snails exclude the possibility of the gene being the primary determinant of body handedness. -- Abstract: Cell polarity, which directs the orientation of asymmetric cell division and segregation of fate determinants, is a fundamental feature of development and differentiation. Regulators of polarity have been extensively studied, and the critical importance of the Par (partitioning-defective) complex as the polarity machinery is now recognized in a wide range of eukaryotic systems. The Par polarity module is evolutionarily conserved, but its mechanism and cooperating factors vary among different systems. Here we describe the cloning and characterization of a pond snail Lymnaea stagnalis homologue of partitioning-defective 6 (Lspar6). The protein product LsPar6 shows high affinity for microtubules and localizes to the mitotic apparatus during embryonic cell division. In vitro assays revealed direct binding of LsPar6 to tubulin and microtubules, which is the first evidence of the direct interaction between the two proteins. The interaction is mediated by two distinct regions of LsPar6 both located in the N-terminal half. Atypical PKC, a functional partner of Par6, was also found to localize to the mitotic spindle. These results suggest that the L. stagnalis Par complex employs the microtubule network in cell polarity processes during the early embryogenesis. Identical sequence and localization of LsPar6 for the dextral and the sinistral snails exclude the possibility of the gene being the primary determinant of handedness.

The polarity protein Par6 is coupled to the microtubule network during molluscan early embryogenesis

International Nuclear Information System (INIS)

Homma, Taihei; Shimizu, Miho; Kuroda, Reiko

2011-01-01

Research highlights: → The cDNAs encoding Par6 and aPKC homologues were cloned from the snail Lymnaea stagnalis. → L. stagnalis Par6 directly interacts with tubulin and microtubules and localizes to the microtubule cytoskeleton during the early embryogenesis. → Identical sequence and localization of LsPar6 for the dextral and the sinistral snails exclude the possibility of the gene being the primary determinant of body handedness. -- Abstract: Cell polarity, which directs the orientation of asymmetric cell division and segregation of fate determinants, is a fundamental feature of development and differentiation. Regulators of polarity have been extensively studied, and the critical importance of the Par (partitioning-defective) complex as the polarity machinery is now recognized in a wide range of eukaryotic systems. The Par polarity module is evolutionarily conserved, but its mechanism and cooperating factors vary among different systems. Here we describe the cloning and characterization of a pond snail Lymnaea stagnalis homologue of partitioning-defective 6 (Lspar6). The protein product LsPar6 shows high affinity for microtubules and localizes to the mitotic apparatus during embryonic cell division. In vitro assays revealed direct binding of LsPar6 to tubulin and microtubules, which is the first evidence of the direct interaction between the two proteins. The interaction is mediated by two distinct regions of LsPar6 both located in the N-terminal half. Atypical PKC, a functional partner of Par6, was also found to localize to the mitotic spindle. These results suggest that the L. stagnalis Par complex employs the microtubule network in cell polarity processes during the early embryogenesis. Identical sequence and localization of LsPar6 for the dextral and the sinistral snails exclude the possibility of the gene being the primary determinant of handedness.

Detection of biosurfactants in Bacillus species: genes and products identification.

Science.gov (United States)

Płaza, G; Chojniak, J; Rudnicka, K; Paraszkiewicz, K; Bernat, P

2015-10-01

To screen environmental Bacillus strains for detection of genes encoding the enzymes involved in biosurfactant synthesis and to evaluate their products e.g. surfactin, iturin and fengycin. The taxonomic identification of isolated from the environment Bacillus strains was performed by Microgene ID Bacillus panel and GEN III Biolog system. The polymerase chain reaction (PCR) strategy for screening of genes in Bacillus strains was set up. Liquid chromatography-mass spectrometry (LC-MS/MS) method was used for the identification of lipopeptides (LPs). All studied strains exhibited the presence of srfAA gene and produced surfactin mostly as four homologues (C13 to C16). Moreover, in 2 strains (KP7, T'-1) simultaneous co-production of 3 biosurfactants: surfactin, iturin and fengycin was observed. Additionally, it was found out that isolate identified as Bacillus subtilis ssp. subtilis (KP7), beside LPs co-production, synthesizes surfactin with the efficiency much higher than other studied strains (40·2 mg l(-1) ) and with the yield ranging from 0·8 to 8·3 mg l(-1) . We showed that the combined methodology based on PCR and LC-MS/MS technique is an optimal tool for the detection of genes encoding enzymes involved in biosurfactant synthesis as well as their products, e.g. surfactin, iturin and fengycin. This approach improves the screening and the identification of environmental Bacillus co-producing biosurfactants-stimulating and facilitating the development of this area of science. The findings of this work will help to improve screening of biosurfactant producers. Discovery of novel biosurfactants and biosurfactants co-production ability has shed light on their new application fields and for the understanding of their interactions and properties. © 2015 The Society for Applied Microbiology.

Regulation of gene expression by tobacco product preparations in cultured human dermal fibroblasts

International Nuclear Information System (INIS)

Malpass, Gloria E.; Arimilli, Subhashini; Prasad, G.L.; Howlett, Allyn C.

2014-01-01

Skin fibroblasts comprise the first barrier of defense against wounds, and tobacco products directly contact the oral cavity. Cultured human dermal fibroblasts were exposed to smokeless tobacco extract (STE), total particulate matter (TPM) from tobacco smoke, or nicotine at concentrations comparable to those found in these extracts for 1 h or 5 h. Differences were identified in pathway-specific genes between treatments and vehicle using qRT-PCR. At 1 h, IL1α was suppressed significantly by TPM and less significantly by STE. Neither FOS nor JUN was suppressed at 1 h by tobacco products. IL8, TNFα, VCAM1, and NFκB1 were suppressed after 5 h with STE, whereas only TNFα and NFκB1 were suppressed by TPM. At 1 h with TPM, secreted levels of IL10 and TNFα were increased. Potentially confounding effects of nicotine were exemplified by genes such as ATF3 (5 h), which was increased by nicotine but suppressed by other components of STE. Within 2 h, TPM stimulated nitric oxide production, and both STE and TPM increased reactive oxygen species. The biological significance of these findings and utilization of the gene expression changes reported herein regarding effects of the tobacco product preparations on dermal fibroblasts will require additional research. - Highlights: • Tobacco product preparations (TPPs) alter gene expression in dermal fibroblasts. • Some immediate early genes critical to the inflammatory process are affected. • Different TPPs produce differential responses in certain pro-inflammatory genes

Regulation of gene expression by tobacco product preparations in cultured human dermal fibroblasts

Energy Technology Data Exchange (ETDEWEB)

Malpass, Gloria E., E-mail: gloria.malpass@gmail.com [Department of Physiology and Pharmacology, Wake Forest University Health Sciences, Winston-Salem, NC 27157 (United States); Arimilli, Subhashini, E-mail: sarimill@wakehealth.edu [Department of Microbiology and Immunology, Wake Forest University Health Sciences, Winston-Salem, NC 27157 (United States); Prasad, G.L., E-mail: prasadg@rjrt.com [R and D Department, R.J. Reynolds Tobacco Company, Winston-Salem, NC 27102 (United States); Howlett, Allyn C., E-mail: ahowlett@wakehealth.edu [Department of Physiology and Pharmacology, Wake Forest University Health Sciences, Winston-Salem, NC 27157 (United States)

2014-09-01

Skin fibroblasts comprise the first barrier of defense against wounds, and tobacco products directly contact the oral cavity. Cultured human dermal fibroblasts were exposed to smokeless tobacco extract (STE), total particulate matter (TPM) from tobacco smoke, or nicotine at concentrations comparable to those found in these extracts for 1 h or 5 h. Differences were identified in pathway-specific genes between treatments and vehicle using qRT-PCR. At 1 h, IL1α was suppressed significantly by TPM and less significantly by STE. Neither FOS nor JUN was suppressed at 1 h by tobacco products. IL8, TNFα, VCAM1, and NFκB1 were suppressed after 5 h with STE, whereas only TNFα and NFκB1 were suppressed by TPM. At 1 h with TPM, secreted levels of IL10 and TNFα were increased. Potentially confounding effects of nicotine were exemplified by genes such as ATF3 (5 h), which was increased by nicotine but suppressed by other components of STE. Within 2 h, TPM stimulated nitric oxide production, and both STE and TPM increased reactive oxygen species. The biological significance of these findings and utilization of the gene expression changes reported herein regarding effects of the tobacco product preparations on dermal fibroblasts will require additional research. - Highlights: • Tobacco product preparations (TPPs) alter gene expression in dermal fibroblasts. • Some immediate early genes critical to the inflammatory process are affected. • Different TPPs produce differential responses in certain pro-inflammatory genes.

Measurement of gluon polarization through spin asymmetry in the production of charmed mesons; Mesure de la polarisation des gluons par l'asymetrie de spin dans la production de mesons charmes

Energy Technology Data Exchange (ETDEWEB)

Panebianco, St

2005-09-15

The main aim of the COMPASS experiment is the measurement of the gluon polarization in the nucleon, which can be accessed by the spin asymmetry in the scattering of a polarized muon beam on a polarized nucleon target. The process sensitive to the gluon polarization is the photon-gluon fusion, which can be tagged in the cleanest way by looking at the production of D{sup 0} mesons. At COMPASS, D{sup 0} mesons are reconstructed from the invariant mass of their decay products. However, it is a rare process, dominated by a large combinatorial background. This thesis presents some studies devoted to the improvement of the charmed mesons reconstruction. The measurement of the efficiency and the space resolution of the 3 drift chamber stations of the COMPASS spectrometer is a necessary step in understanding the performances of the reconstruction of particle trajectories. The hadron identification, which is fundamental in the reconstruction of charmed meson decay, is performed by a RICH detector. A statistical treatment of signal and background, together with an upgrade project to replace the present front-end electronics, have been developed in order to improve the particle identification performances. The second part of this work concerns the spin asymmetry measurement, which requires the application of event selection criteria in order to minimize the noise over signal ratio in the D{sup 0} invariant mass, and the development of event-weighting methods to reduce the statistical error. This work presents a preliminary result, based on 2002-2004 statistics, which is the {delta}G/G measurement from open charm production. Although the error bars are large, the measured gluon polarization is compatible with zero. Given the present accuracy, this result is compatible with the existing direct measurements from other channels. However, it does not allow to distinguish between different theoretical models. (author)

Conversion of polar and non-polar algae oil lipids to fatty acid methyl esters with solid acid catalysts--A model compound study.

Science.gov (United States)

Asikainen, Martta; Munter, Tony; Linnekoski, Juha

2015-09-01

Bio-based fuels are becoming more and more important due to the depleting fossil resources. The production of biodiesel from algae oil is challenging compared to terrestrial vegetable oils, as algae oil consists of polar fatty acids, such as phospholipids and glycolipids, as well as non-polar triglycerides and free fatty acids common in vegetable oils. It is shown that a single sulphonated solid acid catalyst can perform the esterification and transesterification reactions of both polar and non-polar lipids. In mild reaction conditions (60-70 °C) Nafion NR50 catalyst produces methyl palmitate (FAME) from the palmitic acid derivatives of di-, and tri-glyceride, free fatty acid, and phospholipid with over 80% yields, with the glycolipid derivative giving nearly 40% yields of FAME. These results demonstrate how the polar and non-polar lipid derivatives of algal oil can be utilised as feedstocks for biodiesel production with a single catalyst in one reaction step. Copyright © 2015 Elsevier Ltd. All rights reserved.

Vertex Degrees and Isomorphic Properties in Complement of an m-Polar Fuzzy Graph

Directory of Open Access Journals (Sweden)

Ch. Ramprasad

2017-01-01

Full Text Available Computational intelligence and computer science rely on graph theory to solve combinatorial problems. Normal product and tensor product of an m-polar fuzzy graph have been introduced in this article. Degrees of vertices in various product graphs, like Cartesian product, composition, tensor product, and normal product, have been computed. Complement and μ-complement of an m-polar fuzzy graph are defined and some properties are studied. An application of an m-polar fuzzy graph is also presented in this article.

Fusion of the SUMO/Sentrin-specific protease 1 gene SENP1 and the embryonic polarity-related mesoderm development gene MESDC2 in a patient with an infantile teratoma and a constitutional t(12;15)(q13;q25).

NARCIS (Netherlands)

Veltman, I.M.; Basten-Vreede, L.A.J.; Cheng, J.; Looijenga, L.H.J.; Janssen, H.A.P.; Schoenmakers, E.F.P.M.; Yeh, E.T.; Geurts van Kessel, A.H.M.

2005-01-01

Recently, we identified a patient with an infantile sacrococcygeal teratoma and a constitutional t(12;15)(q13;q25). Here, we show that, as a result of this chromosomal translocation, the SUMO/Sentrin-specific protease 1 gene (SENP1) on chromosome 12 and the embryonic polarity-related mesoderm

Polarized proton and antiproton experiments at Fermilab E-581/704

International Nuclear Information System (INIS)

Yokosawa, A.

1988-01-01

We summarize activities concerning the Fermilab polarized beams. They include a description of the polarized-beam facility, measurements of beam polarization by polarimeters, asymmetry measurements in the π 0 production at large x, and experiments with polarized beams during the next fixed-target period. 8 refs., 9 figs

MicroRNA-24 Modulates Staphylococcus aureus-Induced Macrophage Polarization by Suppressing CHI3L1.

Science.gov (United States)

Jingjing, Zhang; Nan, Zhang; Wei, Wu; Qinghe, Guo; Weijuan, Wang; Peng, Wang; Xiangpeng, Wang

2017-06-01

Macrophages play a crucial role in host innate anti-Staphylococcus aureus defense, which is tightly regulated by multiple factors, including microRNAs. A recent study showed that miR-24 plays an important role in macrophage polarization. Here, we investigated the biological function of miR-24 in S. aureus-stimulated macrophages. The results revealed that miR-24 expression was significantly decreased in both human and mouse macrophage cell lines with S. aureus stimulation in a time-dependent manner. Moreover, miR-24 overexpression significantly decreased the production of M1 phenotype markers, such as IL-6, iNOS, TNF-α, CD86, and CD80, whereas it increased the production of M2 markers, such as Arg1, CCL17, CCL22, CD163, and CD206, in S. aureus-stimulated macrophages. Conversely, knockdown of miR-24 promoted M1 macrophage polarization but diminished M2 macrophage polarization in S. aureus-stimulated macrophages. Furthermore, CHI3L1 was predicted as a target gene of miR-24 using bioinformatics software and identified by luciferase reporter assay. Additionally, miR-24 overexpression inhibited CHI3L1 expression and downregulated the downstream MAPK pathway in S. aureus-stimulated macrophages. Finally, CHI3L1 overexpression rescued macrophage polarization and MAPK pathway inhibition induced by miR-24 mimic transfection in S. aureus-stimulated macrophages. In conclusion, the data suggest that miR-24 serves as a molecular regulator in S. aureus-induced macrophage polarization through targeting of CHI3L1 and regulation of the MAPK pathway, which may provide a promising therapeutic target for S. aureus-related infections and inflammatory diseases.

Linear polarizers based on oriented polymer blends

NARCIS (Netherlands)

Jagt, H.J.B.; Dirix, Y.J.L.; Hikmet, R.A.M.; Bastiaansen, C.W.M.

1998-01-01

Linear sheet polarizers based on the anisotropic scattering of light by drawn polymer blends are introduced here. The proper selection of materials and processing conditions for the production of large-area, flexible films of phase-segregated polymer blends suitable for polarization applications are

Genome-wide identification of KANADI1 target genes.

Directory of Open Access Journals (Sweden)

Paz Merelo

Full Text Available Plant organ development and polarity establishment is mediated by the action of several transcription factors. Among these, the KANADI (KAN subclade of the GARP protein family plays important roles in polarity-associated processes during embryo, shoot and root patterning. In this study, we have identified a set of potential direct target genes of KAN1 through a combination of chromatin immunoprecipitation/DNA sequencing (ChIP-Seq and genome-wide transcriptional profiling using tiling arrays. Target genes are over-represented for genes involved in the regulation of organ development as well as in the response to auxin. KAN1 affects directly the expression of several genes previously shown to be important in the establishment of polarity during lateral organ and vascular tissue development. We also show that KAN1 controls through its target genes auxin effects on organ development at different levels: transport and its regulation, and signaling. In addition, KAN1 regulates genes involved in the response to abscisic acid, jasmonic acid, brassinosteroids, ethylene, cytokinins and gibberellins. The role of KAN1 in organ polarity is antagonized by HD-ZIPIII transcription factors, including REVOLUTA (REV. A comparison of their target genes reveals that the REV/KAN1 module acts in organ patterning through opposite regulation of shared targets. Evidence of mutual repression between closely related family members is also shown.

Deletion of a Chitin Synthase Gene in a Citric Acid Producing Strain of Aspergillus niger

Energy Technology Data Exchange (ETDEWEB)

Rinker, Torri E.; Baker, Scott E.

2007-01-29

Citric acid production by the filamentous fungus Aspergillus niger is carried out in a process that causes the organism to drastically alter its morphology. This altered morphology includes hyphal swelling and highly limited polar growth resulting in clumps of swollen cells that eventually aggregate into pellets of approximately 100 microns in diameter. In this pelleted form, A. niger has increased citric acid production as compared to growth in filamentous form. Chitin is a crucial component of the cell wall of filamentous fungi. Alterations in the deposition or production of chitin may have profound effects on the morphology of the organism. In order to study the role of chitin synthesis in pellet formation we have deleted a chitin synthase gene (csmA) in Aspergillus niger strain ATCC 11414 using a PCR based deletion construct. This class of chitin synthases is only found in filamentous fungi and is not present in yeasts. The csmA genes contain a myosin motor domain at the N-terminus and a chitin synthesis domain at the C-terminus. They are believed to contribute to the specialized polar growth observed in filamentous fungi that is lacking in yeasts. The csmA deletion strain (csmAΔ) was subjected to minimal media with and without osmotic stabilizers as well as tested in citric acid production media. Without osmotic stabilizers, the mutant germlings were abnormally swollen, primarily in the subapical regions, and contained large vacuoles. However, this swelling is ultimately not inhibitory to growth as the germlings are able to recover and undergo polar growth. Colony formation was largely unaffected in the absence of osmotic stabilizers. In citric acid production media csmAΔ was observed to have a 2.5 fold increase in citric acid production. The controlled expression of this class of chitin synthases may be useful for improving production of organic acids in filamentous fungi.

Tracking polar lows in CLM

Energy Technology Data Exchange (ETDEWEB)

Zahn, M.; Storch, H. von [Inst. for Coastal Research, GKSS Research Center, Geesthacht (Germany); Meteorological Inst., Univ. of Hamburg (Germany)

2008-08-15

Polar lows are severe cyclones in sub-polar oceans sized beyond the resolved scale of existing global reanalysis products. We used the NCEP/NCAR reanalyses data to drive a regional climate model (CLM) in order to reproduce finer resolved atmospheric fields over the North Atlantic over a two year period. In these fields we detected polar lows by means of a detection algorithm based on a spatial digital bandpass filter. CLM was run in two different ways, the conventional way and with additionally prescribing the analysed large scale situation. The resulting temporal and spatial distributions of polar lows between the different simulations are compared. A reasonable seasonal cycle and spatial distribution was found for all simulations. A lower number of polar lows in the spectral nudged simulation indicates a closer vicinity to reality. Higher temporal and spatial variability between the conventional simulations suggest a more random generation of polar lows. Frequency distributions of track-lengths reveal shorter tracks when nudging is applied. Maximum wind speeds reveal only minor, insignificant differences between all runs and are higher in conventional mode. (orig.)

Study of top-quark polarization in single-top-quark production at the CERN LHC

CERN Document Server

Espriu, Doménec

2002-01-01

This paper complements the study of single top production at the LHC aiming to estimate the sensitivity of different observables to the magnitude of the effective couplings. In a previous paper the dominant $W$-gluon fusion mechanism was considered, while here we extend the analysis to the subdominant (10% with our set of experimental cuts) s-channel process. In order to distinguish left from right effective couplings it is required to consider polarized cross-sections and/or include $m_b$ effects. The spin of the top is accessible only indirectly by measuring the angular distribution of its decay products. We show that the presence of effective right-handed couplings implies necessarily that the top is not in a pure spin state. We discuss to what extent quantum interference terms can be neglected in the measurement and therefore simply multiply production and decay probabilities clasically. The coarsening involved in the measurement process makes this possible. We determine for each process the optimal spin ...

Improvement of oxytetracycline production mediated via cooperation of resistance genes in Streptomyces rimosus.

Science.gov (United States)

Yin, Shouliang; Wang, Xuefeng; Shi, Mingxin; Yuan, Fang; Wang, Huizhuan; Jia, Xiaole; Yuan, Fang; Sun, Jinliang; Liu, Tiejun; Yang, Keqian; Zhang, Yuxiu; Fan, Keqiang; Li, Zilong

2017-09-01

Increasing the self-resistance levels of Streptomyces is an effective strategy to improve the production of antibiotics. To increase the oxytetracycline (OTC) production in Streptomyces rimosus, we investigated the cooperative effect of three co-overexpressing OTC resistance genes: one gene encodes a ribosomal protection protein (otrA) and the other two express efflux proteins (otrB and otrC). Results indicated that combinational overexpression of otrA, otrB, and otrC (MKABC) exerted a synergetic effect. OTC production increased by 179% in the recombinant strain compared with that of the wild-type strain M4018. The resistance level to OTC was increased by approximately two-fold relative to the parental strain, thereby indicating that applying the cooperative effect of self-resistance genes is useful to improve OTC production. Furthermore, the previously identified cluster-situated activator OtcR was overexpressed in MKABC in constructing the recombinant strain MKRABC; such strain can produce OTC of approximately 7.49 g L -1 , which represents an increase of 19% in comparison with that of the OtcR-overexpressing strain alone. Our work showed that the cooperative overexpression of self-resistance genes is a promising strategy to enhance the antibiotics production in Streptomyces.

Polarization as a tool for studying the physics of weak interactions

International Nuclear Information System (INIS)

Soffer, J.

1983-01-01

Realistic possibilities exist now to obtain high-energy polarized proton beams with high luminosity and to measure the polarization of a stored beam. This will be our motivation to discuss parity violating weak effects in inclusive hadron and jet production with polarized beams. There are also interesting predictions for helicity asymmetries in W +- and Z production in pp and pantip collisions

Polarization as a tool for studying the physics of weak interactions

International Nuclear Information System (INIS)

Soffer, J.

1983-01-01

Realistic possibilities exist now to obtain high-energy polarized proton beams with high luminosity and to measure the polarization of a stored beam. This will be our motivation to discuss parity violating weak effects in inclusive hadron and jet production with polarized beams. There are also interesting predictions for helicity asymmetries in Wsup(+-) and Z production in pp and panti p collisions. (orig.)

Measurement of inclusive lambda, k-short and lambda bar production and lambda polarization from interactions of 400 GeV/c protons with hydrogen

International Nuclear Information System (INIS)

Grobel, R.A.

1980-01-01

The Lorentz invariant cross sections have been measured for the inclusive production of lambdas, K-shorts and lambda bars with Feynman x ranging from .2 to .98 and transverse momentum values between 0 and 2 GeV/c. This was done by fully analyzing the decays of 1.3 million lambdas, 130,000 K-shorts and 42,000 lambda bars detected in he neutral hyperon beam at Fermilab. The transverse (parity conserving) component of the lambda spin polarization has been found to be non-zero, demonstrating that the polarization is not a complex nuclear effect. The polarization depends on Feynman x and transverse momentum. The global fit of these data shows that the polarization from hydrogen is the same as that from Be

Extensive molecular differences between anterior- and posterior-half-sclerotomes underlie somite polarity and spinal nerve segmentation

Directory of Open Access Journals (Sweden)

Keynes Roger J

2009-05-01

Full Text Available Abstract Background The polarization of somite-derived sclerotomes into anterior and posterior halves underlies vertebral morphogenesis and spinal nerve segmentation. To characterize the full extent of molecular differences that underlie this polarity, we have undertaken a systematic comparison of gene expression between the two sclerotome halves in the mouse embryo. Results Several hundred genes are differentially-expressed between the two sclerotome halves, showing that a marked degree of molecular heterogeneity underpins the development of somite polarity. Conclusion We have identified a set of genes that warrant further investigation as regulators of somite polarity and vertebral morphogenesis, as well as repellents of spinal axon growth. Moreover the results indicate that, unlike the posterior half-sclerotome, the central region of the anterior-half-sclerotome does not contribute bone and cartilage to the vertebral column, being associated instead with the development of the segmented spinal nerves.

WWγ couplings from single W-production in polarized e+e- collisions

International Nuclear Information System (INIS)

Philipsen, O.

1992-01-01

Using the process eγ→Wν we study the WWγ vertex in ε + ε - collisions with polarized beams at a future 500 GeV collider. Analytical expressions for the helicity amplitudes of the process eγ→Wν are evaluated and a derivation of the equivalent photon approximation is given for the case of polarized electron beams. The resulting photon spectrum is then used to compute the total cross section as well as various differential distributions for the process ε + ε - →ε + W - ν. Special emphasis is put on the effects of using polarized electron beams and their influence on the sensitivity to anomalous couplings. (orig.)

The production and extraction of polarized electrons from an optically pumped helium discharge

International Nuclear Information System (INIS)

Vandiver, R.J.; Schearer, L.D.; Gay, T.J.

1992-01-01

Polarized electrons are produced from interactions involving nearly 100% polarized helium 2 3 S 1 metastable atoms in a weak electrical discharge. The high metastable polarizations are obtained through the use of recently developed, high-power lasers tunable to the relevant helium transitions near 1083 nm and the development of a crossed beam pumping technique. The dominant interactions involving the 2 3 S 1 atoms and electrons are spin preserving; hence the electrons of the discharge attain a high polarization. The authors have extracted a well collimated electron beam with over 20 μA of current from the discharge. An optical polarimeter will be used to determine the polarization of the extracted electrons

Candidate genes for drought tolerance and improved productivity in ...

Indian Academy of Sciences (India)

Madhu

Improving drought tolerance and productivity is one of the most difficult tasks for ... Keywords. Candidate gene; mapping population; polymerase chain reaction; single marker analysis. .... ple and the mean value computed. 2.4 Isolation of DNA.

New investigations of polarized solid HD targets

International Nuclear Information System (INIS)

Honig, A.; Whisnant, C.S.

1995-01-01

Polarized solid HD targets in a frozen-spin mode, with superior nuclear physics characteristics and simple operational configurations, have previously been restricted in their deployment due to a disproportionate target production time with respect to utilization time. Recent investigations have yielded frozen-spin polarization lifetimes, at a convenient target temperature of 1.5 K, of nearly a year for both H and D at high holding fields, and of more than a week at sub-Tesla holding fields. These results, taken together with the advent of new interesting spin-physics using relatively weakly ionizing beams, such as polarized photon beams, remove the above impediment and open up the use of polarized solid HD to long duration nuclear spin-physics experiments. Large, multiple targets can be produced, retrieved from the polarization-production apparatus with a cold-transport (4 K) device, stored for very long times in inexpensive (1.5 K, 7 T) cryostats, and introduced 'off-the-shelf' into in-beam cryostats via the portable cold-transport apparatus. Various modes for achieving polarized H and/or D, as well as already achieved and expected polarization values, are reported. Experimental results are given on Kapitza resistance between the solid HD and the cooling wires necessary to obtain low temperatures during the heat-evolving polarization process. 15 mK is achievable using gold-plated aluminum wires, which constitute 15% extraneous nucleons over the number of polarizable H or D nucleons. Application to more highly ionizing beams is also given consideration. ((orig.))

Coregulation of terpenoid pathway genes and prediction of isoprene production in Bacillus subtilis using transcriptomics

Energy Technology Data Exchange (ETDEWEB)

Hess, Becky M.; Xue, Junfeng; Markillie, Lye Meng; Taylor, Ronald C.; Wiley, H. S.; Ahring, Birgitte K.; Linggi, Bryan E.

2013-06-19

The isoprenoid pathway converts pyruvate to isoprene and related isoprenoid compounds in plants and some bacteria. Currently, this pathway is of great interest because of the critical role that isoprenoids play in basic cellular processes as well as the industrial value of metabolites such as isoprene. Although the regulation of several pathway genes has been described, there is a paucity of information regarding the system level regulation and control of the pathway. To address this limitation, we examined Bacillus subtilis grown under multiple conditions and then determined the relationship between altered isoprene production and the pattern of gene expression. We found that terpenoid genes appeared to fall into two distinct subsets with opposing correlations with respect to the amount of isoprene produced. The group whose expression levels positively correlated with isoprene production included dxs, the gene responsible for the commitment step in the pathway, as well as ispD, and two genes that participate in the mevalonate pathway, yhfS and pksG. The subset of terpenoid genes that inversely correlated with isoprene production included ispH, ispF, hepS, uppS, ispE, and dxr. A genome wide partial least squares regression model was created to identify other genes or pathways that contribute to isoprene production. This analysis showed that a subset of 213 regulated genes was sufficient to create a predictive model of isoprene production under different conditions and showed correlations at the transcriptional level. We conclude that gene expression levels alone are sufficiently informative about the metabolic state of a cell that produces increased isoprene and can be used to build a model which accurately predicts production of this secondary metabolite across many simulated environmental conditions.

Some like it cold: microbial transformations of mercury in polar regions

DEFF Research Database (Denmark)

Barkay, Tamar; Kroer, Niels A.; Poulain, Alexandre J.

2011-01-01

The contamination of polar regions with mercury that is transported from lower latitudes as inorganic mercury has resulted in the accumulation of methylmercury (MeHg) in food chains, risking the health of humans and wildlife. While production of MeHg has been documented in polar marine and terres......The contamination of polar regions with mercury that is transported from lower latitudes as inorganic mercury has resulted in the accumulation of methylmercury (MeHg) in food chains, risking the health of humans and wildlife. While production of MeHg has been documented in polar marine...

The RHIC polarized H{sup −} ion source

Energy Technology Data Exchange (ETDEWEB)

Zelenski, A., E-mail: zelenski@bnl.gov; Atoian, G.; Raparia, D.; Ritter, J.; Steski, D. [Brookhaven National Laboratory, Upton, New York 11973 (United States)

2016-02-15

A novel polarization technique had been successfully implemented for the Relativistic Heavy Ion Collider (RHIC) polarized H{sup −} ion source upgrade to higher intensity and polarization. In this technique, a proton beam inside the high magnetic field solenoid is produced by ionization of the atomic hydrogen beam (from external source) in the He-gaseous ionizer cell. Further proton polarization is produced in the process of polarized electron capture from the optically pumped Rb vapor. The use of high-brightness primary beam and large cross sections of charge-exchange cross sections resulted in production of high intensity H{sup −} ion beam of 85% polarization. The source very reliably delivered polarized beam in the RHIC Run-2013 and Run-2015. High beam current, brightness, and polarization resulted in 75% polarization at 23 GeV out of Alternating Gradient Synchrotron (AGS) and 60%-65% beam polarization at 100-250 GeV colliding beams in RHIC.

Sources of polarized negative ions: progress and prospects

International Nuclear Information System (INIS)

Haeberli, W.

1980-01-01

A summary of recent progress in the art of producing beams of polarized ions is given. In all sources of polarized ions, one first produces (or selects) neutral atoms which are polarized in electron spin. Those types of sources which use a beam of thermal polarized hydrogen atoms are discussed. Progress made in the preparation of the atomic beam and the methods used to convert the neutral atoms to polarized ions is summarized. The second type of source discussed is based on fast (keV) polarized hydrogen atoms. Conversion to negative ions is very simple because one only needs to pass the fast atoms through a suitable charge exchange medium (gas or vapor). However, the production of the polarized atoms is more difficult in this case. The proposal to employ polarized alkali vapor to form a beam of polarized fast H atoms, where the polarized alkali atoms are produced either by an atomic beam apparatus or by optical pumping is discussed

Nuclear Fusion with Polarized Nucleons & PolFusion

CERN Document Server

Engels, Ralf; Büscher, Markus; Vasilyev, Alexander

2016-01-01

This book offers a detailed examination of the latest work on the potential of polarized fuel to realize the vision of energy production by nuclear fusion. It brings together contributions from nuclear physicists and fusion physicists with the aims of fostering exchange of information between the two communities, describing the current status in the field, and examining new ideas and projects under development. It is evident that polarized fuel can offer huge improvements for the first generation of fusion reactors and open new technological possibilities for future generations, including neutron lean reactors, which could be the most popular and sustainable energy production option to avoid environmental problems. Nevertheless, many questions must be resolved before polarized fuel can be used for energy production in the different reactor types. Readers will find this book to be a stimulating source of information on the key issues. It is based on contributions from leading scientists delivered at the meetin...

Development of spin polarized electron beam

International Nuclear Information System (INIS)

Nakanishi, Tsutomu

2001-01-01

Physical structure of the polarized electron beam production is explained in this paper. Nagoya University group has been improving the quality of beam. The present state of quality and the development objects are described. The new results of the polarized electron reported in 'RES-2000 Workshop' in October 2000, are introduced. The established ground of GaAs type polarized electron beam source, observation of the negative electron affinity (NEA) surface, some problems of NEA surface of high energy polarized electron beam such as the life, time response, the surface charge limited phenomena of NEA surface are explained. The interested reports in the RES-2000 Workshop consisted of observation by SPLEEM (Spin Low Energy Electron Microscope), Spin-STM and Spin-resolved Photoelectron Spectroscopy. To increase the performance of the polarized electron source, we will develop low emittance and large current. (S.Y.)

Polarization measurement for internal polarized gaseous targets

International Nuclear Information System (INIS)

Ye Zhenyu; Ye Yunxiu; Lv Haijiang; Mao Yajun

2004-01-01

The authors present an introduction to internal polarized gaseous targets, polarization method, polarization measurement method and procedure. To get the total nuclear polarization of hydrogen atoms (including the polarization of the recombined hydrogen molecules) in the target cell, authors have measured the parameters relating to atomic polarization and polarized hydrogen atoms and molecules. The total polarization of the target during our measurement is P T =0.853 ± 0.036. (authors)

A spindle pole antigen gene MoSPA2 is important for polar cell growth of vegetative hyphae and conidia, but is dispensable for pathogenicity in Magnaporthe oryzae.

Science.gov (United States)

Li, Chao; Yang, Jun; Zhou, Wei; Chen, Xiao-Lin; Huang, Jin-Guang; Cheng, Zhi-Hua; Zhao, Wen-Sheng; Zhang, Yan; Peng, You-Liang

2014-11-01

Spa2 is an important component of the multiprotein complex polarisome, which is involved in the establishment, maintenance, termination of polarized cell growth and is important for defining tip growth of filamentous fungi. In this study, we isolated an insertional mutant of the rice blast fungus Magnaporthe oryzae that formed smaller colony and conidia compared with the wild type. In the mutant, a spindle pole antigen gene MoSPA2 was disrupted by the integration of an exogenous plasmid. Targeted gene deletion and complementation assays demonstrated the gene disruption was responsible for the defects of the insertional mutant. Interestingly, the MoSpa2-GFP fusion protein was found to accumulate as a spot at hyphal tips, septa of hyphae and conidial tip cells where germ tubes are usually produced, but not in appressoria, infection hyphae or at the septa of conidia. Furthermore, the deletion mutants of MoSPA2 exhibited slower hyphal tip growth, more hyphal branches, and smaller size of conidial tip cells. However, MoSPA2 is not required for plant infection. These results indicate that MoSPA2 is required for vegetative hyphal growth and maintaining conidium morphology and that spotted accumulation of MoSpa2 is important for its functions during cell polar growth.

Polarization Study for NLC Positron Source Using EGS4

Energy Technology Data Exchange (ETDEWEB)

Liu, James C

2000-09-20

SLAC is exploring a polarized positron source to study new physics for the NLC project. The positron source envisioned in this paper consists of a polarized electron source, a 50-MeV electron accelerator, a thin target less-than-or-equal-to 0.2 radiation length for positron production, and a capture system for high-energy, small angular divergence positrons. The EGS4 code was used to study the yield, energy spectra, emission-angle distribution, and the mean polarization of the positrons emanating from W-Re and Ti targets hit by longitudinally polarized electron and photon beams. To account for polarization within the EGS4 code a method devised by Flottmann was used, which takes into account polarization transfer for pair production, bremsstrahlung, and Compton interactions. A mean polarization of 0.85 for positrons with energies greater than 25 MeV was obtained. Most of the high-energy positrons were emitted within a forward angle of 20 degrees. The yield of positrons above 25 MeV per incident photon was 0.034, which was about 70 times higher than that obtained with an electron beam.

Characterisation and comparison of the uptake of ionizable and polar pesticides, pharmaceuticals and personal care products by POCIS and Chemcatchers

NARCIS (Netherlands)

Kaserzon, S.L.; Hawker, D.W.; Kennedy, K.; Bartkow, M.; Carter, S.; Booij, K.; Mueller, J.F.

2014-01-01

Growing concern about the environmental impact of ionizable and polar organic chemicals such as pesticides, pharmaceuticals and personal care products has lead to the inclusion of some in legislative and regulatory frameworks. It is expected that future monitoring requirements for these chemicals in

Polar-phase indices of perioral muscle reciprocity during syllable production in Parkinson's disease.

Science.gov (United States)

Chu, Shin Ying; Barlow, Steven M; Lee, Jaehoon; Wang, Jingyan

2017-12-01

This research characterised perioral muscle reciprocity and amplitude ratio in lower lip during bilabial syllable production [pa] at three rates to understand the neuromotor dynamics and scaling of motor speech patterns in individuals with Parkinson's disease (PD). Electromyographic (EMG) signals of the orbicularis oris superior [OOS], orbicularis oris inferior [OOI] and depressor labii inferioris [DLI] were recorded during syllable production and expressed as polar-phase notations. PD participants exhibited the general features of reciprocity between OOS, OOI and DLI muscles as reflected in the EMG during syllable production. The control group showed significantly higher integrated EMG amplitude ratio in the DLI:OOS muscle pairs than PD participants. No speech rate effects were found in EMG muscle reciprocity and amplitude magnitude across all muscle pairs. Similar patterns of muscle reciprocity in PD and controls suggest that corticomotoneuronal output to the facial nucleus and respective perioral muscles is relatively well-preserved in our cohort of mild idiopathic PD participants. Reduction of EMG amplitude ratio among PD participants is consistent with the putative reduction in the thalamocortical activation characteristic of this disease which limits motor cortex drive from generating appropriate commands which contributes to bradykinesia and hypokinesia of the orofacial mechanism.

Vasopressin Gene-Related Products in the Management of Breast Cancer

National Research Council Canada - National Science Library

North, William

1999-01-01

...), and this information coupled with an absence of vasopressin gene-related products from fibrocystic disease potentially provides us with a new screening test for distinguishing both breast cancer...

Guidelines for the naming of genes, gene products, and mutants in the opportunistic protists.

Science.gov (United States)

Limper, Andrew H; Weiss, Louis M

2011-01-01

The opportunistic protists encompass a wide diversity of organisms including Pneumocystis, Toxoplasma, cryptosporidia, microsporidia, and related genera. Recent advances in the molecular biology and cellular biochemistry of these organisms have led to the identification of an ever growing numbers of key genes and their cognate proteins. Until now, these molecules have not been designated using any consistent nomenclature system, leading to considerable confusion. The participants of the 11th International Workshop on Opportunistic Protists met on August 3, 2010 to reach consensus of a nomenclature system for genes, gene products, and mutants in the opportunistic protists. The following summary reports the consensus agreement to move toward a unified nomenclature system for these organisms. The system is adapted from that used for Saccharomyces cerevisiae. © 2011 The Author(s). Journal of Eukaryotic Microbiology © 2011 International Society of Protistologists.

DNA repair synthesis dependent on the uvrA,B gene products

International Nuclear Information System (INIS)

Moses, R.E.; Moody, E.E.M.

1975-01-01

Ultraviolet irradiation of toluene-treated Escherichia coli causes an inhibition of replicative DNA synthesis. This is followed by the appearance of nonconservative DNA repair synthesis which does not require either the polymerase or 5' → 3' exonucleolytic activities of DNA polymerase I. The repair synthesis may be catalyzed by DNA polymerase III activity but does not require a functional DNA polymerase II. The ultraviolet-induced synthesis requires ATP and is dependent on a functional uvrA and uvrB gene product. However, other uvr gene products are not required for the synthesis. The recB function is also not required

Measurement of Λ polarization from Z decays

Science.gov (United States)

Buskulic, D.; de Bonis, I.; Decamp, D.; Ghez, P.; Goy, C.; Lees, J.-P.; Lucotte, A.; Minard, M.-N.; Odier, P.; Pietrzyk, B.; Chmeissani, M.; Crespo, J. M.; Delfino, M.; Efthymiopoulos, I.; Fernandez, E.; Fernandez-Bosman, M.; Garrido, Ll.; Juste, A.; Martinez, M.; Orteu, S.; Pacheco, A.; Padilla, C.; Palla, F.; Pascual, A.; Perlas, J. A.; Riu, I.; Sanchez, F.; Teubert, F.; Colaleo, A.; Creanza, D.; de Palma, M.; Farilla, A.; Gelao, G.; Girone, M.; Iaselli, G.; Maggi, G.; Maggi, M.; Marinelli, N.; Natali, S.; Nuzzo, S.; Ranieri, A.; Raso, G.; Romano, F.; Ruggieri, F.; Selvaggi, G.; Silvestris, L.; Tempesta, P.; Zito, G.; Huang, X.; Lin, J.; Ouyang, Q.; Wang, T.; Xie, Y.; Xu, R.; Xue, S.; Zhang, J.; Zhang, L.; Zhao, W.; Alemany, R.; Bazarko, A. O.; Bonvicini, G.; Cattaneo, M.; Comas, P.; Coyle, P.; Drevermann, H.; Forty, R. W.; Frank, M.; Hagelberg, R.; Harvey, J.; Jacobsen, R.; Janot, P.; Jost, B.; Kneringer, E.; Knobloch, J.; Lehraus, I.; Martin, E. B.; Mato, P.; Minten, A.; Miquel, R.; Mir, Ll. M.; Moneta, L.; Oest, T.; Palazzi, P.; Pater, J. R.; Pusztaszeri, J.-F.; Ranjard, F.; Rensing, P.; Rolandi, L.; Schlatter, D.; Schmelling, M.; Schneider, O.; Tejessy, W.; Tomalin, I. R.; Venturi, A.; Wachsmuth, H.; Wagner, A.; Wildish, T.; Witzeling, W.; Wotschack, J.; Ajlatouni, Z.; Barrès, A.; Boyer, C.; Falvard, A.; Gay, P.; Guicheney, C.; Henrard, P.; Jousset, J.; Michel, B.; Monteil, S.; Montret, J.-C.; Pallin, D.; Perret, P.; Podlyski, F.; Proriol, J.; Rossignol, J.-M.; Fearnley, T.; Hansen, J. B.; Hansen, J. D.; Hansen, J. R.; Hansen, P. H.; Nilsson, B. S.; Wäänänen, A.; Kyriakis, A.; Markou, C.; Simopoulou, E.; Siotis, I.; Vayaki, A.; Zachariadou, K.; Blondel, A.; Bonneaud, G.; Brient, J. C.; Bourdon, P.; Rougé, A.; Rumpf, M.; Tanaka, R.; Valassi, A.; Verderi, M.; Videau, H.; Candlin, D. J.; Parsons, M. I.; Focardi, E.; Parrini, G.; Corden, M.; Georgiopoulos, C.; Jaffe, D. E.; Antonelli, A.; Bencivenni, G.; Bologna, G.; Bossi, F.; Campana, P.; Capon, G.; Casper, D.; Chiarella, V.; Felici, G.; Laurelli, P.; Mannocchi, G.; Murtas, F.; Murtas, G. P.; Passalacqua, L.; Pepe-Altarelli, M.; Curtis, L.; Dorris, S. J.; Halley, A. W.; Knowles, I. G.; Lynch, J. G.; O'Shea, V.; Raine, C.; Reeves, P.; Scarr, J. M.; Smith, K.; Thompson, A. S.; Thomson, F.; Thorn, S.; Turnbull, R. M.; Becker, U.; Geweniger, C.; Graefe, G.; Hanke, P.; Hansper, G.; Hepp, V.; Kluge, E. E.; Putzer, A.; Rensch, B.; Schmidt, M.; Sommer, J.; Stenzel, H.; Tittel, K.; Werner, S.; Wunsch, M.; Abbaneo, D.; Beuselinck, R.; Binnie, D. M.; Cameron, W.; Dornan, P. J.; Dornan, P. J.; Moutoussi, A.; Nash, J.; Sedgbeer, J. K.; Stacey, A. M.; Williams, M. D.; Dissertori, G.; Girtler, P.; Kuhn, D.; Rudolph, G.; Bowdery, C. K.; Brodbeck, T. J.; Colrain, P.; Crawford, G.; Finch, A. J.; Foster, F.; Hughes, G.; Sloan, T.; Whelan, E. P.; Williams, M. I.; Galla, A.; Greene, A. M.; Kleinknecht, K.; Quast, G.; Renk, B.; Rohne, E.; Sander, H.-G.; van Gemmeren, P.; Zeitnitz, C.; Aubert, J. J.; Bencheikh, A. M.; Benchouk, C.; Bonissent, A.; Bujosa, G.; Calvet, D.; Carr, J.; Diaconu, C.; Etienne, F.; Konstantinidis, N.; Nicod, D.; Payre, P.; Rousseau, D.; Talby, M.; Sadouki, A.; Thulasidas, M.; Trabelsi, K.; Abt, I.; Assmann, R.; Bauer, C.; Blum, W.; Dietl, H.; Dydak, F.; Ganis, G.; Gotzhein, C.; Jakobs, K.; Kroha, H.; Lütjens, G.; Lutz, G.; Männer, W.; Moser, H.-G.; Richter, R.; Rosado-Schlosser, A.; Schael, S.; Settles, R.; Seywerd, H.; Denis, R. St.; Wiedenmann, W.; Wolf, G.; Boucrot, J.; Callot, O.; Cordier, A.; Davier, M.; Duflot, L.; Grivaz, J.-F.; Heusse, Ph.; Jacquet, M.; Kim, D. W.; Le Diberder, F.; Lefrançois, J.; Lutz, A.-M.; Nikolic, I.; Park, H. J.; Park, I. C.; Schune, M.-H.; Simion, S.; Veillet, J.-J.; Videau, I.; Azzurri, P.; Bagliesi, G.; Batignani, G.; Bettarini, S.; Bozzi, C.; Calderini, G.; Carpinelli, M.; Ciocci, M. A.; Ciulli, V.; Dell'Orso, R.; Fantechi, R.; Ferrante, I.; Foà, L.; Forti, F.; Giassi, A.; Giorgi, M. A.; Gregorio, A.; Ligabue, F.; Lusiani, A.; Marrocchesi, P. S.; Messineo, A.; Rizzo, G.; Sanguinetti, G.; Sciabà, A.; Spagnolo, P.; Steinberger, J.; Tenchini, R.; Tonelli, G.; Vannini, C.; Verdini, P. G.; Walsh, J.; Betteridge, A. P.; Blair, G. A.; Bryant, L. M.; Cerutti, F.; Chambers, J. T.; Gao, Y.; Green, M. G.; Johnson, D. L.; Medcalf, T.; Perrodo, P.; Strong, J. A.; von Wimmersperg-Toeller, J. H.; Botterill, D. R.; Clifft, R. W.; Edgecock, T. R.; Haywood, S.; Maley, P.; Norton, P. R.; Thompson, J. C.; Wright, A. E.; Bloch-Devaux, B.; Colas, P.; Emery, S.; Kozanecki, W.; Lançon, E.; Lemaire, M. C.; Locci, E.; Marx, B.; Perez, P.; Rander, J.; Renardy, J.-F.; Roussarie, A.; Schuller, J.-P.; Schwindling, J.; Trabelsi, A.; Vallage, B.; Johnson, R. P.; Kim, H. Y.; Litke, A. M.; McNeil, M. A.; Taylor, G.; Beddall, A.; Booth, C. N.; Boswell, R.; Brew, C. A. J.; Cartwright, S.; Combley, F.; Koksal, A.; Letho, M.; Newton, W. M.; Rankin, C.; Reeve, J.; Thompson, L. F.; Böhrer, A.; Brandt, S.; Büscher, V.; Cowan, G.; Grupen, C.; Lutters, G.; Minguet-Rodriguez, J.; Rivera, F.; Saraiva, P.; Smolik, L.; Stephan, F.; Aleppo, M.; Apollonio, M.; Bosisio, L.; Della Marina, R.; Giannini, G.; Gobbo, B.; Musolino, G.; Ragusa, F.; Rothberg, J.; Wasserbaech, S.; Armstrong, S. R.; Bellantoni, L.; Elmer, P.; Feng, Z.; Ferguson, D. P. S.; Gao, Y. S.; González, S.; Grahl, J.; Greening, T. C.; Harton, J. L.; Hayes, O. J.; Hu, H.; McNamara, P. A.; Nachtman, J. M.; Orejudos, W.; Pan, Y. B.; Saadi, Y.; Schmitt, M.; Scott, I. J.; Sharma, V.; Turk, J. D.; Walsh, A. M.; Wu, Sau Lan; Wu, X.; Yamartino, J. M.; Zheng, M.; Zobernig, G.; Aleph Collaboration

1996-02-01

The polarization of Λ baryons from Z decays is studied with the ALEPH apparatus. Evidence of longitudinal polarization of s quarks from Z decay is observed for the first time. The measured longitudinal Λ polarization is PLΛ = -0.32 ± 0.07 for z = {p}/{p beam} > 0.3 . This agrees with the prediction of -0.39 ± 0.08 from the standard model and the constituent quark model, where the error is due to uncertainties in the mechanism for Λ production. The observed Λ polarization is diluted with respect to the primary s quark polarization by Λ baryons without a primary s quark. Measurements of the Λ forward-backward asymmetry and of the correlation between back-to-back Λ overlineΛ pairs are used to check this dilution. In addition the transverse Λ polarization is measured. An indication of transverse polarization, more than two standard deviations away from zero, is found along the normal to the plane defined by the thrust axis and the Λ direction.

Differential S1P Receptor Profiles on M1- and M2-Polarized Macrophages Affect Macrophage Cytokine Production and Migration.

Science.gov (United States)

Müller, Jan; von Bernstorff, Wolfram; Heidecke, Claus-Dieter; Schulze, Tobias

2017-01-01

Introduction . Macrophages are key players in complex biological processes. In response to environmental signals, macrophages undergo polarization towards a proinflammatory (M1) or anti-inflammatory (M2) phenotype. Sphingosine 1-phosphate (S1P) is a bioactive lysophospholipid that acts via 5 G-protein coupled receptors (S1P 1-5 ) in order to influence a broad spectrum of biological processes. This study assesses S1P receptor expression on macrophages before and after M1 and M2 polarization and performs a comparative analysis of S1P signalling in the two activational states of macrophages. Methods . Bone marrow derived macrophages (BMDM) from C57 BL/6 mice were cultured under either M1- or M2-polarizing conditions. S1P-receptor expression was determined by quantitative RT-PCR. Influence of S1P on macrophage activation, migration, phagocytosis, and cytokine secretion was assessed in vitro. Results . All 5 S1P receptor subclasses were expressed in macrophages. Culture under both M1- and M2-polarizing conditions led to significant downregulation of S1P 1 . In contrast, M1-polarized macrophages significantly downregulated S1P 4 . The expression of the remaining three S1P receptors did not change. S1P increased expression of iNOS under M2-polarizing conditions. Furthermore, S1P induced chemotaxis in M1 macrophages and changed cytokine production in M2 macrophages. Phagocytosis was not affected by S1P-signalling. Discussion . The expression of different specific S1P receptor profiles may provide a possibility to selectively influence M1- or M2-polarized macrophages.

The APC tumor suppressor is required for epithelial cell polarization and three-dimensional morphogenesis

Science.gov (United States)

Lesko, Alyssa C.; Goss, Kathleen H.; Yang, Frank F.; Schwertner, Adam; Hulur, Imge; Onel, Kenan; Prosperi, Jenifer R.

2015-01-01

The Adenomatous Polyposis Coli (APC) tumor suppressor has been previously implicated in the control of apical-basal polarity; yet, the consequence of APC loss-of-function in epithelial polarization and morphogenesis has not been characterized. To test the hypothesis that APC is required for the establishment of normal epithelial polarity and morphogenesis programs, we generated APC-knockdown epithelial cell lines. APC depletion resulted in loss of polarity and multi-layering on permeable supports, and enlarged, filled spheroids with disrupted polarity in 3D culture. Importantly, these effects of APC knockdown were independent of Wnt/β-catenin signaling, but were rescued with either full-length or a carboxy (c)-terminal segment of APC. Moreover, we identified a gene expression signature associated with APC knockdown that points to several candidates known to regulate cell-cell and cell-matrix communication. Analysis of epithelial tissues from mice and humans carrying heterozygous APC mutations further support the importance of APC as a regulator of epithelial behavior and tissue architecture. These data also suggest that the initiation of epithelial-derived tumors as a result of APC mutation or gene silencing may be driven by loss of polarity and dysmorphogenesis. PMID:25578398

Measurements of prompt $J/\\psi$ and $\\psi(2S)$ production and polarization at CMS

CERN Document Server

Kratschmer, Ilse

2015-01-01

Quarkonia, bound states of a heavy quark and its antiquark, are theideal probe to study how quarks form bound states via strong interactions. Non Relativistic QuantumChromoDynamics (NRQCD) is aQCD inspired model that factorizes the production of a bound stateinto two steps: the creation of the initial quark-antiquark pair andthe transformation of the initial pair to a bound state. The NRQCDfactorization approach relies on experimental data to describe thenon-perturbative evolution of the initial pair to a bound state.This thesis describes the measurements of the production cross sections and polarizations of the prompt J/ψ and ψ(2S) mesons, whichare c¯ states that are produced either directly or via the decay ofca short-lived intermediate state. The measurements are based on adimuon data sample collected by the CMS experiment at the LHC√in proton-proton collisions at s = 7 TeV, corresponding to a total integrated luminosity of 4.9 fb−1 . The prompt J/ψ and ψ(2S)production cross sections are determine...

PolarTREC—A Model Program for Taking Polar Literacy into the Future

Science.gov (United States)

Warburton, J.; Timm, K.; Larson, A. M.

2009-12-01

Polar TREC—Teachers and Researchers Exploring and Collaborating, is a three-year (2007-2009) NSF-funded International Polar Year (IPY) teacher professional development program that advances Science, Technology, Engineering, and Mathematics (STEM) education by improving teacher content knowledge and instructional practices through Teacher Research Experiences (TRE) in the Arctic and Antarctic. Leveraging profound changes and fascinating science taking place in the polar regions, PolarTREC broadly disseminates activities and products to students, educators, researchers, and the public, connecting them with the Arctic and Antarctica and sustaining the widespread interest in the polar regions and building on the enthusiasm that was generated through IPY. Central to the PolarTREC Teacher Research Experience Model, over 40 teachers have spent two to eight weeks participating in hands-on research in the polar regions and sharing their experiences with diverse audiences via live events, online multimedia journals, and interactive bulletin boards. The Connecting Arctic/Antarctic Researchers and Educators (CARE) Network unifies learning community members participants, alumni, and others, developing a sustainable association of education professionals networking to share and apply polar STEM content and pedagogical skills. Educator and student feedback from preliminary results of the program evaluation has shown that PolarTREC’s comprehensive program activities have many positive impacts on educators and their ability to teach science concepts and improve their teaching methods. Additionally, K-12 students polled in interest surveys showed significant changes in key areas including amount of time spent in school exploring research activities, importance of understanding science for future work, importance of understanding the polar regions as a person in today’s world, as well as increased self-reported knowledge and interest in numerous science content areas. Building

RNG1 is a Late Marker of the Apical Polar Ring in Toxoplasma gondii

Science.gov (United States)

Tran, Johnson Q.; de Leon, Jessica C.; Li, Catherine; Huynh, My-Hang; Beatty, Wandy; Morrissette, Naomi S.

2010-01-01

The asexually proliferating stages of apicomplexan parasites cause acute symptoms of diseases such as malaria, cryptosporidiosis and toxoplasmosis. These stages are characterized by the presence of two independent microtubule organizing centers (MTOCs). Centrioles are found at the poles of the intranuclear spindle. The apical polar ring (APR), a MTOC unique to apicomplexans, organizes subpellicular microtubules which impose cell shape and apical polarity on these protozoa. Here we describe the characteristics of a novel protein that localizes to the APR of Toxoplasma gondii which we have named ring-1 (RNG1). There are related RNG1 proteins in Neospora caninum and Sarcocystis neurona but no obvious homologs in Plasmodium spp., Cryptosporidium spp. or Babesia spp. RNG1 is a small, low-complexity, detergent-insoluble protein that assembles at the APR very late in the process of daughter parasite replication. We were unable to knock-out the RNG1 gene, suggesting that its gene product is essential. Tagged RNG1 lines have also allowed us to visualize the APR during growth of Toxoplasma in the microtubule-disrupting drug oryzalin. Oryzalin inhibits nuclear division and cytokinesis although Toxoplasma growth continues, and similar to earlier observations of unchecked centriole duplication in oryzalin-treated parasites, the APR continues to duplicate during aberrant parasite growth. PMID:20658557

Transcriptome and Gene Ontology (GO) Enrichment Analysis Reveals Genes Involved in Biotin Metabolism That Affect L-Lysine Production in Corynebacterium glutamicum.

Science.gov (United States)

Kim, Hong-Il; Kim, Jong-Hyeon; Park, Young-Jin

2016-03-09

Corynebacterium glutamicum is widely used for amino acid production. In the present study, 543 genes showed a significant change in their mRNA expression levels in L-lysine-producing C. glutamicum ATCC21300 than that in the wild-type C. glutamicum ATCC13032. Among these 543 differentially expressed genes (DEGs), 28 genes were up- or downregulated. In addition, 454 DEGs were functionally enriched and categorized based on BLAST sequence homologies and gene ontology (GO) annotations using the Blast2GO software. Interestingly, NCgl0071 (bioB, encoding biotin synthase) was expressed at levels ~20-fold higher in the L-lysine-producing ATCC21300 strain than that in the wild-type ATCC13032 strain. Five other genes involved in biotin metabolism or transport--NCgl2515 (bioA, encoding adenosylmethionine-8-amino-7-oxononanoate aminotransferase), NCgl2516 (bioD, encoding dithiobiotin synthetase), NCgl1883, NCgl1884, and NCgl1885--were also expressed at significantly higher levels in the L-lysine-producing ATCC21300 strain than that in the wild-type ATCC13032 strain, which we determined using both next-generation RNA sequencing and quantitative real-time PCR analysis. When we disrupted the bioB gene in C. glutamicum ATCC21300, L-lysine production decreased by approximately 76%, and the three genes involved in biotin transport (NCgl1883, NCgl1884, and NCgl1885) were significantly downregulated. These results will be helpful to improve our understanding of C. glutamicum for industrial amino acid production.

The Aspergillus flavus Homeobox Gene, hbx1, Is Required for Development and Aflatoxin Production

Directory of Open Access Journals (Sweden)

Jeffrey W. Cary

2017-10-01

Full Text Available Homeobox proteins, a class of well conserved transcription factors, regulate the expression of targeted genes, especially those involved in development. In filamentous fungi, homeobox genes are required for normal conidiogenesis and fruiting body formation. In the present study, we identified eight homeobox (hbx genes in the aflatoxin-producing ascomycete, Aspergillus flavus, and determined their respective role in growth, conidiation and sclerotial production. Disruption of seven of the eight genes had little to no effect on fungal growth and development. However, disruption of the homeobox gene AFLA_069100, designated as hbx1, in two morphologically different A. flavus strains, CA14 and AF70, resulted in complete loss of production of conidia and sclerotia as well as aflatoxins B1 and B2, cyclopiazonic acid and aflatrem. Microscopic examination showed that the Δhbx1 mutants did not produce conidiophores. The inability of Δhbx1 mutants to produce conidia was related to downregulation of brlA (bristle and abaA (abacus, regulatory genes for conidiophore development. These mutants also had significant downregulation of the aflatoxin pathway biosynthetic genes aflC, aflD, aflM and the cluster-specific regulatory gene, aflR. Our results demonstrate that hbx1 not only plays a significant role in controlling A. flavus development but is also critical for the production of secondary metabolites, such as aflatoxins.

New insights about antibiotic production by Pseudomonas aeruginosa: a gene expression analysis

Science.gov (United States)

Gionco, Bárbara; Tavares, Eliandro R.; de Oliveira, Admilton G.; Yamada-Ogatta, Sueli F.; do Carmo, Anderson O.; Pereira, Ulisses de Pádua; Chideroli, Roberta T.; Simionato, Ane S.; Navarro, Miguel O. P.; Chryssafidis, Andreas L.; Andrade, Galdino

2017-09-01

The bacterial resistance for antibiotics is one of the most important problems in public health and only a small number of new products are in development. Antagonistic microorganisms from soil are a promising source of new candidate molecules. Products of secondary metabolism confer adaptive advantages for their producer, in the competition for nutrients in the microbial community. The biosynthesis process of compounds with antibiotic activity is the key to optimize their production and the transcriptomic study of microorganisms is of great benefit for the discovery of these metabolic pathways. Pseudomonas aeruginosa LV strain growing in the presence of copper chloride produces a bioactive organometallic compound, which has a potent antimicrobial activity against various microorganisms. The objective of this study was to verify overexpressed genes and evaluate their relation to the organometallic biosynthesis in this microorganism. P. aeruginosa LV strain was cultured in presence and absence of copper chloride. Two methods were used for transcriptomic analysis, genome reference-guided assembly and de novo assembly. The genome referenced analysis identified nine upregulated genes when bacteria were exposed to copper chloride, while the De Novo Assembly identified twelve upregulated genes. Nineteen genes can be related to an increased microbial metabolism for the extrusion process of exceeding intracellular copper. Two important genes are related to the biosynthesis of phenazine and tetrapyrroles compounds, which can be involved in the bioremediation of intracellular copper and biosynthesis of the organometallic compound. Additional studies are being carried out to further prove the function of the described genes and relate them to the biosynthetic pathway of the organometallic compound.

A first unbiased global determination of polarized PDFs and their uncertainties

International Nuclear Information System (INIS)

Nocera, Emanuele R.; Ball, Richard D.; Forte, Stefano; Ridolfi, Giovanni; Rojo, Juan

2014-01-01

We present a first global determination of spin-dependent parton distribution functions (PDFs) and their uncertainties using the NNPDF methodology: NNPDFpol1.1. Longitudinally polarized deep-inelastic scattering data, already used for the previous NNPDFpol1.0 PDF set, are supplemented with the most recent polarized hadron collider data for inclusive jet and W boson production from the STAR and PHENIX experiments at RHIC, and with open-charm production data from the COMPASS experiment, thereby allowing for a separate determination of the polarized quark and antiquark PDFs, and an improved determination of the medium- and large-x polarized gluon PDF. We study the phenomenological implications of the NNPDFpol1.1 set, and we provide predictions for the longitudinal double-spin asymmetry for semi-inclusive pion production at RHIC

A first unbiased global determination of polarized PDFs and their uncertainties

Directory of Open Access Journals (Sweden)

Emanuele R. Nocera

2014-10-01

Full Text Available We present a first global determination of spin-dependent parton distribution functions (PDFs and their uncertainties using the NNPDF methodology: NNPDFpol1.1. Longitudinally polarized deep-inelastic scattering data, already used for the previous NNPDFpol1.0 PDF set, are supplemented with the most recent polarized hadron collider data for inclusive jet and W boson production from the STAR and PHENIX experiments at RHIC, and with open-charm production data from the COMPASS experiment, thereby allowing for a separate determination of the polarized quark and antiquark PDFs, and an improved determination of the medium- and large-x polarized gluon PDF. We study the phenomenological implications of the NNPDFpol1.1 set, and we provide predictions for the longitudinal double-spin asymmetry for semi-inclusive pion production at RHIC.

A first unbiased global determination of polarized PDFs and their uncertainties

Energy Technology Data Exchange (ETDEWEB)

Nocera, Emanuele R. [Dipartimento di Fisica, Università di Milano and INFN, Sezione di Milano, Via Celoria 16, I-20133 Milano (Italy); Ball, Richard D. [Higgs Centre, University of Edinburgh, JCMB, KB, Mayfield Rd, Edinburgh EH9 3JZ, Scotland (United Kingdom); Forte, Stefano [Dipartimento di Fisica, Università di Milano and INFN, Sezione di Milano, Via Celoria 16, I-20133 Milano (Italy); Ridolfi, Giovanni [Dipartimento di Fisica, Università di Genova and INFN, Sezione di Genova, Genova (Italy); Rojo, Juan [PH Department, TH Unit, CERN, CH-1211 Geneva 23 (Switzerland); Rudolf Peierls Centre for Theoretical Physics, 1 Keble Road, University of Oxford, OX1 3NP Oxford (United Kingdom)

2014-10-15

We present a first global determination of spin-dependent parton distribution functions (PDFs) and their uncertainties using the NNPDF methodology: NNPDFpol1.1. Longitudinally polarized deep-inelastic scattering data, already used for the previous NNPDFpol1.0 PDF set, are supplemented with the most recent polarized hadron collider data for inclusive jet and W boson production from the STAR and PHENIX experiments at RHIC, and with open-charm production data from the COMPASS experiment, thereby allowing for a separate determination of the polarized quark and antiquark PDFs, and an improved determination of the medium- and large-x polarized gluon PDF. We study the phenomenological implications of the NNPDFpol1.1 set, and we provide predictions for the longitudinal double-spin asymmetry for semi-inclusive pion production at RHIC.

A first unbiased global determination of polarized PDFs and their uncertainties

CERN Document Server

Nocera, Emanuele R.; Forte, Stefano; Ridolfi, Giovanni; Rojo, Juan

2014-01-01

We present a first global determination of spin-dependent parton distribution functions (PDFs) and their uncertainties using the NNPDF methodology: NNPDFpol1.1. Longitudinally polarized deep-inelastic scattering data, already used for the previous NNPDFpol1.0 PDF set, are supplemented with the most recent polarized hadron collider data for inclusive jet and $W$ boson production from the STAR and PHENIX experiments at RHIC, and with open-charm production data from the COMPASS experiment, thereby allowing for a separate determination of the polarized quark and anti-quark PDFs, and an improved determination of the medium- and large-$x$ polarized gluon PDF. We study the phenomenological implications of the NNPDFpol1.1 set, and we provide predictions for the longitudinal double-spin asymmetry for semi-inclusive pion production at RHIC.

Transcriptomic analysis of human polarized macrophages: more than one role of alternative activation?

Directory of Open Access Journals (Sweden)

Eleonora Derlindati

Full Text Available Macrophages are a heterogeneous cell population which in response to the cytokine milieu polarize in either classically activated macrophages (M1 or alternatively activated macrophages (M2. This plasticity makes macrophages essential in regulating inflammation, immune response and tissue remodeling and a novel therapeutic target in inflammatory diseases such as atherosclerosis. The aim of the study was to describe the transcriptomic profiles of differently polarized human macrophages to generate new hypotheses on the biological function of the different macrophage subtypes.Polarization of circulating monocytes/macrophages of blood donors was induced in vitro by IFN-γ and LPS (M1, by IL-4 (M2a, and by IL-10 (M2c. Unstimulated cells (RM served as time controls. Gene expression profile of M1, M2a, M2c and RM was assessed at 6, 12 and 24h after polarization with Whole Human Genome Agilent Microarray technique. When compared to RM, M1 significantly upregulated pathways involved in immunity and inflammation, whereas M2a did the opposite. Conversely, decreased and increased expression of mitochondrial metabolism, consistent with insulin resistant and insulin sensitive patterns, was seen in M1 and M2a, respectively. The time sequence in the expression of some pathways appeared to have some specific bearing on M1 function. Finally, canonical and non-canonical Wnt genes and gene groups, promoting inflammation and tissue remodeling, were upregulated in M2a compared to RM.Our data in in vitro polarized human macrophages: 1. confirm and extend known inflammatory and anti-inflammatory gene expression patterns; 2. demonstrate changes in mitochondrial metabolism associated to insulin resistance and insulin sensitivity in M1 and M2a, respectively; 3. highlight the potential relevance of gene expression timing in M1 function; 4. unveil enhanced expression of Wnt pathways in M2a suggesting a potential dual (pro-inflammatory and anti-inflammatory role of M2a in

A second pectin lyase gene (pel2) from Aspergillus oryzae KBN616: its sequence analysis and overexpression, and characterization of the gene products.

Science.gov (United States)

Kitamoto, N; Yoshino-Yasuda, S; Ohmiya, K; Tsukagoshi, N

2001-01-01

A second pectin lyase gene, designated pel2, was isolated from a shoyu koji mold Aspergillus oryzae KBN616 and characterized. The structural gene comprised 1306 bp with three introns. The ORF encoded 375 amino acids with a signal peptide of 19 amino acids. The deduced amino acid sequence showed high similarity to those of A. oryzae Pel1, Aspergillus niger pectin lyases and Glomerella cingulata Pn1A. The pel2 gene was overexpressed under the control of the promoter of the A. oryzae TEF1 gene for purification and enzymatic characterization of its gene product. The gene product exhibited two molecular masses of 48 and 44 kDa due to different degrees of glycosylation. Both proteins had the same pH optimum of 6.0 and temperature optimum of 50 degrees C.

NFAT5-Regulated Macrophage Polarization Supports the Proinflammatory Function of Macrophages and T Lymphocytes.

Science.gov (United States)

Tellechea, Mónica; Buxadé, Maria; Tejedor, Sonia; Aramburu, Jose; López-Rodríguez, Cristina

2018-01-01

Macrophages are exquisite sensors of tissue homeostasis that can rapidly switch between pro- and anti-inflammatory or regulatory modes to respond to perturbations in their microenvironment. This functional plasticity involves a precise orchestration of gene expression patterns whose transcriptional regulators have not been fully characterized. We had previously identified the transcription factor NFAT5 as an activator of TLR-induced responses, and in this study we explore its contribution to macrophage functions in different polarization settings. We found that both in classically and alternatively polarized macrophages, NFAT5 enhanced functions associated with a proinflammatory profile such as bactericidal capacity and the ability to promote Th1 polarization over Th2 responses. In this regard, NFAT5 upregulated the Th1-stimulatory cytokine IL-12 in classically activated macrophages, whereas in alternatively polarized ones it enhanced the expression of the pro-Th1 mediators Fizz-1 and arginase 1, indicating that it could promote proinflammatory readiness by regulating independent genes in differently polarized macrophages. Finally, adoptive transfer assays in vivo revealed a reduced antitumor capacity in NFAT5-deficient macrophages against syngeneic Lewis lung carcinoma and ID8 ovarian carcinoma cells, a defect that in the ID8 model was associated with a reduced accumulation of effector CD8 T cells at the tumor site. Altogether, detailed analysis of the effect of NFAT5 in pro- and anti-inflammatory macrophages uncovered its ability to regulate distinct genes under both polarization modes and revealed its predominant role in promoting proinflammatory macrophage functions. Copyright © 2017 by The American Association of Immunologists, Inc.

Major genes and QTL influencing wool production and quality: a review

Directory of Open Access Journals (Sweden)

Purvis Ian

2005-12-01

Full Text Available Abstract The opportunity exists to utilise our knowledge of major genes that influence the economically important traits in wool sheep. Genes with Mendelian inheritance have been identified for many important traits in wool sheep. Of particular importance are genes influencing pigmentation, wool quality and the keratin proteins, the latter of which are important for the morphology of the wool fibre. Gene mapping studies have identified some chromosomal regions associated with variation in wool quality and production traits. The challenge now is to build on this knowledge base in a cost-effective way to deliver molecular tools that facilitate enhanced genetic improvement programs for wool sheep.

Measurement of polarization observables of the associated strangeness production in proton proton interactions

Energy Technology Data Exchange (ETDEWEB)

Hauenstein, F.; Klaja, P. [Forschungszentrum Juelich, Institut fuer Kernphysik, Juelich (Germany); Friedrich-Alexander-Universitaet Erlangen-Nuernberg, Erlangen (Germany); Borodina, E.; Dzhygadlo, R.; Gast, W.; Gillitzer, A.; Grzonka, D.; Kilian, K.; Mertens, M.; Roderburg, E.; Roeder, M.; Sefzick, T.; Wintz, P. [Forschungszentrum Juelich, Institut fuer Kernphysik, Juelich (Germany); Clement, H.; Doroshkevich, E.; Ehrhardt, K. [Physikalisches Institut der Universitaet Tuebingen, Tuebingen (Germany); University of Tuebingen, Kepler Center for Astro and Particle Physics, Tuebingen (Germany); Eyrich, W.; Kober, L.; Krapp, M. [Friedrich-Alexander-Universitaet Erlangen-Nuernberg, Erlangen (Germany); Jowzaee, S. [Forschungszentrum Juelich, Institut fuer Kernphysik, Juelich (Germany); Jagellonian University, Institute of Physics, Cracow (Poland); Moskal, P.; Smyrski, J. [Jagellonian University, Institute of Physics, Cracow (Poland); Ritman, J. [Forschungszentrum Juelich, Institut fuer Kernphysik, Juelich (Germany); Juelich Aachen Research Alliance, Forces and Matter Experiments (JARA-FAME), Forschungszentrum Juelich, Juelich (Germany); RWTH Aachen, Aachen (Germany); Ruhr-Universitaet Bochum, Experimentalphysik I, Bochum (Germany); Schroeder, W. [Forschungszentrum Juelich, Corporate Development, Juelich (Germany); Wuestner, P. [Zentralinstitut fuer Engineering, Elektronik und Analytik, Juelich (Germany); Collaboration: The COSY-TOF Collaboration

2016-11-15

The Λ polarization, the analyzing power, and the Λ spin transfer coefficient of the reaction pp → pK{sup +} Λ were measured at beam momenta of 2.70 GeV/c and 2.95 GeV/c corresponding to excess energies of 122 MeV and 204 MeV. While the analyzing power and the spin transfer coefficient do not change significantly with the excess energy, the Λ polarization varies strongly and changes its sign. As this is the first measurement of polarization observables below an excess energy of 200 MeV, the change of the sign of the Λ polarization was not observed before. The high statistics of the data (∼ 200 k events for each momentum) enables detailed studies of the dependence of the Λ polarization and the analyzing power on the center-of-mass momentum of the particles. The results of the spin transfer coefficient are in qualitative agreement with the DISTO experiment. The Λ polarization data of 2.95 GeV/c are only conform with the DISTO experiment, while both the 2.70 GeV/c and 2.95 GeV/c data differ strongly from all previous measurements, whether exclusive or inclusive. (orig.)

Nuclear-physical investigations with oriented nuclei and polarized neutrons

International Nuclear Information System (INIS)

Alfimenkov, V.P.; Pikel'ner, L.B.; Sharapov, Eh.I.

1980-01-01

Several experiments with oriented nuclei and polarized neutrons are considered, as well as some methods of polarization of neutrons and nuclei. Experiments on the study of spin dependence of neutron cross sections for fissionable and nonfissionable nuclei interaction of polarized neutrons with polarized nuclei as well as measurement of magnetic momenta of compound-states of rare-earth nuclei. Described are some investigations with thermal neutrons: study on spin dependence of neutron scattering length with nuclei and gamma radiation of neutron radiation capture. Difficulties of production of high-intensive polarized neutron beams and construction of oriented targets are noted. Neutron polarization by transmission of them through a polarized proton target is the most universal method (out of existing methods) in the energy range under consideration [ru

Wnt signaling and polarity in freshwater sponges.

Science.gov (United States)

Windsor Reid, Pamela J; Matveev, Eugueni; McClymont, Alexandra; Posfai, Dora; Hill, April L; Leys, Sally P

2018-02-02

The Wnt signaling pathway is uniquely metazoan and used in many processes during development, including the formation of polarity and body axes. In sponges, one of the earliest diverging animal groups, Wnt pathway genes have diverse expression patterns in different groups including along the anterior-posterior axis of two sponge larvae, and in the osculum and ostia of others. We studied the function of Wnt signaling and body polarity formation through expression, knockdown, and larval manipulation in several freshwater sponge species. Sponge Wnts fall into sponge-specific and sponge-class specific subfamilies of Wnt proteins. Notably Wnt genes were not found in transcriptomes of the glass sponge Aphrocallistes vastus. Wnt and its signaling genes were expressed in archaeocytes of the mesohyl throughout developing freshwater sponges. Osculum formation was enhanced by GSK3 knockdown, and Wnt antagonists inhibited both osculum development and regeneration. Using dye tracking we found that the posterior poles of freshwater sponge larvae give rise to tissue that will form the osculum following metamorphosis. Together the data indicate that while components of canonical Wnt signaling may be used in development and maintenance of osculum tissue, it is likely that Wnt signaling itself occurs between individual cells rather than whole tissues or structures in freshwater sponges.

Physics with polarized electron beams

International Nuclear Information System (INIS)

Swartz, M.L.

1988-01-01

As a distinct field, elementary particle physics is now approximately forty years old. In all that time, only a few of the thousands of experiments that have been performed have made use of spin polarized particle beams (with apologies to those who have studied neutrino interactions, polarized beam are defined to refer to the case in which the experimenter has control over the polarization direction). If the discussion is restricted to spin polarized electron beams, the number of experiments becomes countable with the fingers of one hand (with several to spare). There are two reasons for this lack of interest. The first is that spin polarized beams are difficult to produce, accelerate, and transport. The second reason is that any physical process that can occur during the collision of a polarized particle with another (polarized or not) can also occur during the collision of unpolarized particles. One might ask then, why has any effort been expended on the subject. The answer, at least in the case of polarized electron beams, is that electron accelerators and storage rings have in recent years achieved sufficient energy to begin to probe the weak interaction directly. The weak interaction distinguishes between left- and right-handed fermionic currents. Left-handed particles interact in a fundamentally different way than their right-handed counterparts. If the experimenter wishes to explore or exploit this difference, he (or she) must either prepare the spin state of the incident particles or analyze the spin state of outgoing particles. For reasons of genearlity and improved statistical precision, the former is usually preferable to the latter. The first of these lectures will review some of the techniques necessary for the production, transport, and monitoring of polarized electron (or positron) beams. The second lecture will survey some of the physics possibilities of polarized electron-positron collisions

Polar and non-polar heterocyclic amines in cooked fish and meat products and their corresponding pan residues.

Science.gov (United States)

Skog, K; Augustsson, K; Steineck, G; Stenberg, M; Jägerstad, M

1997-06-01

Fourteen cooked dishes with their corresponding pan residues were analysed for polar and non-polar heterocyclic amines using HPLC. The choice of foods, including beef, pork, poultry, game, fish, egg and sausages, was based on an investigation of an elderly population in Stockholm participating in an analytical epidemiological case-control study on cancer risks after intake of heterocyclic amines. The food items were prepared using normal household cooking practices, and to reflect the wide range of surface browning of the cooked dishes that would be encountered in this population, four cooking temperatures were used in the range 150-225 degrees C. For all food samples, the total amount of heterocyclic amines formed at 150 degrees C was less than 1 ng/g cooked product, and at 175 degrees C less than 2 ng/g. The highest concentrations of heterocyclic amines were detected in fillet of pork, reindeer meat and chicken breast fried at 200 and 225 degrees C and their corresponding pan residues. The total sum of 2-amino-3,8-dimethylimidazo-[4,5-f]quinoxaline, 2-amino-3,4,8-trimethylimidazo[4,5-f]quinoxaline and 2-amino-1-methyl-6-phenylimidazo[4,5-b]pyridine was about 1 microgram per 100 g portion (including pan residues) for reindeer meat and chicken breast, and between 1.9 and 6.3 micrograms per 100-g portion for fillet of pork. PhIP was the most abundant heterocyclic amine, identified in 73 of 84 samples, and the highest concentration of PhIP, 32.0 ng/g, was found in the pan residue from fillet of pork cooked at 225 degrees C. The non-polar heterocyclic amines 3-amino-1,4-dimethyl-5H-pyrido[4,3-b]indole and 3-amino-1-methyl-5H-pyrido[4,3-b]indole were detected in the range of 0.5-7.4 ng/g in most foods cooked at 225 degrees C, and also in meat sauce prepared at 200 and 175 degrees C. The other heterocyclic amines tested for: 2-amino-3-methylimidazo-[4,5-f]quinoline, 2-amino-3,4-dimethylimidazo[4,5-f]quinoline, 2-amino-6-methyl-pyrido-[1,2-a:3',2'-d]-imidazole and 2

Regulatory Oversight of Cell and Gene Therapy Products in Canada.

Science.gov (United States)

Ridgway, Anthony; Agbanyo, Francisca; Wang, Jian; Rosu-Myles, Michael

2015-01-01

Health Canada regulates gene therapy products and many cell therapy products as biological drugs under the Canadian Food and Drugs Act and its attendant regulations. Cellular products that meet certain criteria, including minimal manipulation and homologous use, may be subjected to a standards-based approach under the Safety of Human Cells, Tissues and Organs for Transplantation Regulations. The manufacture and clinical testing of cell and gene therapy products (CGTPs) presents many challenges beyond those for protein biologics. Cells cannot be subjected to pathogen removal or inactivation procedures and must frequently be administered shortly after final formulation. Viral vector design and manufacturing control are critically important to overall product quality and linked to safety and efficacy in patients through concerns such as replication competence, vector integration, and vector shedding. In addition, for many CGTPs, the value of nonclinical studies is largely limited to providing proof of concept, and the first meaningful data relating to appropriate dosing, safety parameters, and validity of surrogate or true determinants of efficacy must come from carefully designed clinical trials in patients. Addressing these numerous challenges requires application of various risk mitigation strategies and meeting regulatory expectations specifically adapted to the product types. Regulatory cooperation and harmonisation at an international level are essential for progress in the development and commercialisation of these products. However, particularly in the area of cell therapy, new regulatory paradigms may be needed to harness the benefits of clinical progress in situations where the resources and motivation to pursue a typical drug product approval pathway may be lacking.

Polarization of charmonium in πN collisions

International Nuclear Information System (INIS)

Tang, Wai-Keung.

1994-09-01

Measurements of the polarization of J/ψ produced in pion-nucleus collisions are in disagreement with leading twist QCD prediction were J/ψ is observed to have negligible polarization whereas theory predicts substantial polarization. We argue that this discrepancy cannot be due to poorly known structure functions nor the relative production rates of J/ψ and X J . The disagreement between theory and experiment suggests important higher twist corrections, as has earlier been surmised from the anomalous non-factorized nuclear A-dependence of the J/ψ cross section

Lepton-pair production and the modified Drell-Yan mechanism in high-energy unpolarized and polarized pp and p anti p collisions

International Nuclear Information System (INIS)

Chen, C.K.

1977-01-01

A modified Drell-Yan mechanism for inclusive dilepton pair production in hadronic reactions is studied, and the significance of comparing high-energy unpolarized and polarized pp and p anti p collisions is discussed. The required beams are currently proposed at Fermilab and CERN

Measurement of $\\Lambda$ polarization from Z decays

CERN Document Server

Buskulic, Damir; Décamp, D; Ghez, P; Goy, C; Lees, J P; Lucotte, A; Minard, M N; Odier, P; Pietrzyk, B; Chmeissani, M; Crespo, J M; Delfino, M C; Efthymiopoulos, I; Fernández, E; Fernández-Bosman, M; Garrido, L; Juste, A; Martínez, M; Orteu, S; Pacheco, A; Padilla, C; Palla, Fabrizio; Pascual, A; Perlas, J A; Riu, I; Sánchez, F; Teubert, F; Colaleo, A; Creanza, D; De Palma, M; Farilla, A; Gelao, G; Girone, M; Iaselli, Giuseppe; Maggi, G; Maggi, M; Marinelli, N; Natali, S; Nuzzo, S; Ranieri, A; Raso, G; Romano, F; Ruggieri, F; Selvaggi, G; Silvestris, L; Tempesta, P; Zito, G; Huang, X; Lin, J; Ouyang, Q; Wang, T; Xie, Y; Xu, R; Xue, S; Zhang, J; Zhang, L; Zhao, W; Alemany, R; Bazarko, A O; Bonvicini, G; Cattaneo, M; Comas, P; Coyle, P; Drevermann, H; Forty, Roger W; Frank, M; Hagelberg, R; Harvey, J; Jacobsen, R; Janot, P; Jost, B; Kneringer, E; Knobloch, J; Lehraus, Ivan; Martin, E B; Mato, P; Minten, Adolf G; Miquel, R; Mir, L M; Moneta, L; Oest, T; Palazzi, P; Pater, J R; Pusztaszeri, J F; Ranjard, F; Rensing, P E; Rolandi, Luigi; Schlatter, W D; Schmelling, M; Schneider, O; Tejessy, W; Tomalin, I R; Venturi, A; Wachsmuth, H W; Wagner, A; Wildish, T; Witzeling, W; Wotschack, J; Ajaltouni, Ziad J; Barrès, A; Boyer, C; Falvard, A; Gay, P; Guicheney, C; Henrard, P; Jousset, J; Michel, B; Monteil, S; Montret, J C; Pallin, D; Perret, P; Podlyski, F; Proriol, J; Rossignol, J M; Fearnley, Tom; Hansen, J B; Hansen, J D; Hansen, J R; Hansen, P H; Nilsson, B S; Wäänänen, A; Kyriakis, A; Markou, C; Simopoulou, Errietta; Siotis, I; Vayaki, Anna; Zachariadou, K; Blondel, A; Bonneaud, G R; Brient, J C; Bourdon, P; Rougé, A; Rumpf, M; Tanaka, R; Valassi, Andrea; Verderi, M; Videau, H L; Candlin, D J; Parsons, M I; Focardi, E; Parrini, G; Corden, M; Georgiopoulos, C H; Jaffe, D E; Antonelli, A; Bencivenni, G; Bologna, G; Bossi, F; Campana, P; Capon, G; Casper, David William; Chiarella, V; Felici, G; Laurelli, P; Mannocchi, G; Murtas, F; Murtas, G P; Passalacqua, L; Pepé-Altarelli, M; Curtis, L; Dorris, S J; Halley, A W; Knowles, I G; Lynch, J G; O'Shea, V; Raine, C; Reeves, P; Scarr, J M; Smith, K; Thompson, A S; Thomson, F; Thorn, S; Turnbull, R M; Becker, U; Geweniger, C; Graefe, G; Hanke, P; Hansper, G; Hepp, V; Kluge, E E; Putzer, A; Rensch, B; Schmidt, M; Sommer, J; Stenzel, H; Tittel, K; Werner, S; Wunsch, M; Abbaneo, D; Beuselinck, R; Binnie, David M; Cameron, W; Dornan, Peter J; Moutoussi, A; Nash, J; Sedgbeer, J K; Stacey, A M; Williams, M D; Dissertori, G; Girtler, P; Kuhn, D; Rudolph, G; Bowdery, C K; Brodbeck, T J; Colrain, P; Crawford, G; Finch, A J; Foster, F; Hughes, G; Sloan, Terence; Whelan, E P; Williams, M I; Galla, A; Greene, A M; Kleinknecht, K; Quast, G; Renk, B; Rohne, E; Sander, H G; Van Gemmeren, P; Zeitnitz, C; Aubert, Jean-Jacques; Bencheikh, A M; Benchouk, C; Bonissent, A; Bujosa, G; Calvet, D; Carr, J; Diaconu, C A; Etienne, F; Konstantinidis, N P; Nicod, D; Payre, P; Rousseau, D; Talby, M; Sadouki, A; Thulasidas, M; Trabelsi, K; Abt, I; Assmann, R W; Bauer, C; Blum, Walter; Dietl, H; Dydak, Friedrich; Ganis, G; Gotzhein, C; Jakobs, K; Kroha, H; Lütjens, G; Lutz, Gerhard; Männer, W; Moser, H G; Richter, R H; Rosado-Schlosser, A; Schael, S; Settles, Ronald; Seywerd, H C J; Saint-Denis, R; Wiedenmann, W; Wolf, G; Boucrot, J; Callot, O; Cordier, A; Davier, M; Duflot, L; Grivaz, J F; Heusse, P; Jacquet, M; Kim, D W; Le Diberder, F R; Lefrançois, J; Lutz, A M; Nikolic, I A; Park, H J; Park, I C; Schune, M H; Simion, S; Veillet, J J; Videau, I; Azzurri, P; Bagliesi, G; Batignani, G; Bettarini, S; Bozzi, C; Calderini, G; Carpinelli, M; Ciocci, M A; Ciulli, V; Dell'Orso, R; Fantechi, R; Ferrante, I; Foà, L; Forti, F; Giassi, A; Giorgi, M A; Gregorio, A; Ligabue, F; Lusiani, A; Marrocchesi, P S; Messineo, A; Rizzo, G; Sanguinetti, G; Sciabà, A; Spagnolo, P; Steinberger, Jack; Tenchini, Roberto; Tonelli, G; Vannini, C; Verdini, P G; Walsh, J; Betteridge, A P; Blair, G A; Bryant, L M; Cerutti, F; Chambers, J T; Gao, Y; Green, M G; Johnson, D L; Medcalf, T; Perrodo, P; Strong, J A; Von Wimmersperg-Töller, J H; Botterill, David R; Clifft, R W; Edgecock, T R; Haywood, S; Maley, P; Norton, P R; Thompson, J C; Wright, A E; Bloch-Devaux, B; Colas, P; Emery, S; Kozanecki, Witold; Lançon, E; Lemaire, M C; Locci, E; Marx, B; Pérez, P; Rander, J; Renardy, J F; Roussarie, A; Schuller, J P; Schwindling, J; Trabelsi, A; Vallage, B; Johnson, R P; Kim, H Y; Litke, A M; McNeil, M A; Taylor, G; Beddall, A; Booth, C N; Boswell, R; Brew, C A J; Cartwright, S L; Combley, F; Köksal, A; Letho, M; Newton, W M; Rankin, C; Reeve, J; Thompson, L F; Böhrer, A; Brandt, S; Büscher, V; Cowan, G D; Grupen, Claus; Lutters, G; Minguet-Rodríguez, J A; Rivera, F; Saraiva, P; Smolik, L; Stephan, F; Aleppo, M; Apollonio, M; Bosisio, L; Della Marina, R; Giannini, G; Gobbo, B; Musolino, G; Ragusa, F; Rothberg, J E; Wasserbaech, S R; Armstrong, S R; Bellantoni, L; Elmer, P; Feng, Z; Ferguson, D P S; Gao, Y S; González, S; Grahl, J; Greening, T C; Harton, J L; Hayes, O J; Hu, H; McNamara, P A; Nachtman, J M; Orejudos, W; Pan, Y B; Saadi, Y; Schmitt, M; Scott, I J; Sharma, V; Turk, J; Walsh, A M; Wu, X; Yamartino, J M; Zheng, M; Zobernig, G

1996-01-01

The polarization of \\Lambda baryons from Z decays is studied with the {\\sc Aleph} apparatus. Evidence of longitudinal polarization of s quarks from Z decay is observed for the first time. The measured longitudinal \\Lambda polarization is P^{\\Lambda}_{L} = -0.32 \\pm 0.07 for z = p/p_{\\mathrm{beam}} > 0.3. This agrees with the prediction of -0.39 \\pm 0.08 from the standard model and the constituent quark model, where the error is due to uncertainties in the mechanism for \\Lambda production. The observed \\Lambda polarization is diluted with respect to the primary s quark polarization by \\Lambda baryons without a primary s quark. Measurements of the \\Lambda forward-backward asymmetry and of the correlation between back-to-back \\Lambda \\bar{\\Lambda} pairs are used to check this dilution. In addition the transverse \\Lambda polarization is measured. An indication of transverse polarization, more than two standard deviations away from zero, is found along the normal to the plane defined by the thrust axis and the \\La...

New Insights about Antibiotic Production by Pseudomonas aeruginosa: A Gene Expression Analysis

Directory of Open Access Journals (Sweden)

Bárbara Gionco

2017-09-01

Full Text Available The bacterial resistance for antibiotics is one of the most important problems in public health and only a small number of new products are in development. Antagonistic microorganisms from soil are a promising source of new candidate molecules. Products of secondary metabolism confer adaptive advantages for their producer, in the competition for nutrients in the microbial community. The biosynthesis process of compounds with antibiotic activity is the key to optimize their production and the transcriptomic study of microorganisms is of great benefit for the discovery of these metabolic pathways. Pseudomonas aeruginosa LV strain growing in the presence of copper chloride produces a bioactive organometallic compound, which has a potent antimicrobial activity against various microorganisms. The objective of this study was to verify overexpressed genes and evaluate their relation to the organometallic biosynthesis in this microorganism. P. aeruginosa LV strain was cultured in presence and absence of copper chloride. Two methods were used for transcriptomic analysis, genome reference-guided assembly and de novo assembly. The genome referenced analysis identified nine upregulated genes when bacteria were exposed to copper chloride, while the De Novo Assembly identified 12 upregulated genes. Nineteen genes can be related to an increased microbial metabolism for the extrusion process of exceeding intracellular copper. Two important genes are related to the biosynthesis of phenazine and tetrapyrroles compounds, which can be involved in the bioremediation of intracellular copper and we suggesting that may involve in the biosynthesis of the organometallic compound. Additional studies are being carried out to further prove the function of the described genes and relate them to the biosynthetic pathway of the organometallic compound.

Characterization of foot-and-mouth disease virus gene products with antisera against bacterially synthesized fusion proteins

International Nuclear Information System (INIS)

Strebel, K.; Beck, E.; Strohmaier, K.; Schaller, H.

1986-01-01

Defined segments of the cloned foot-and-mouth disease virus genome corresponding to all parts of the coding region were expressed in Escherichia coli as fusions to the N-terminal part of the MS2-polymerase gene under the control of the inducible λPL promoter. All constructs yielded large amounts of proteins, which were purified and used to raise sequence-specific antisera in rabbits. These antisera were used to identify the corresponding viral gene products in 35 S-labeled extracts from foot-and-mouth disease virus-infected BHK cells. This allowed us to locate unequivocally all mature foot-and-mouth disease virus gene products in the nucleotide sequence, to identify precursor-product relationships, and to detect several foot-and mouth disease virus gene products not previously identified in vivo or in vitro

Ancestral polymorphisms and sex-biased migration shaped the demographic history of brown bears and polar bears.

Directory of Open Access Journals (Sweden)

Shigeki Nakagome

Full Text Available Recent studies have reported discordant gene trees in the evolution of brown bears and polar bears. Genealogical histories are different among independent nuclear loci and between biparentally inherited autosomal DNA (aDNA and matrilineal mitochondrial DNA (mtDNA. Based on multi-locus genomic sequences from aDNA and mtDNA, we inferred the population demography of brown and polar bears and found that brown bears have 6 times (aDNA or more than 14 times (mtDNA larger population sizes than polar bears and that polar bear lineage is derived from within brown bear diversity. In brown bears, the effective population size ratio of mtDNA to aDNA was at least 0.62, which deviated from the expected value of 0.25, suggesting matriarchal population due to female philopatry and male-biased migration. These results emphasize that ancestral polymorphisms and sex-biased migration may have contributed to conflicting branching patterns in brown and polar bears across aDNA genes and mtDNA.

Ancestral polymorphisms and sex-biased migration shaped the demographic history of brown bears and polar bears.

Science.gov (United States)

Nakagome, Shigeki; Mano, Shuhei; Hasegawa, Masami

2013-01-01

Recent studies have reported discordant gene trees in the evolution of brown bears and polar bears. Genealogical histories are different among independent nuclear loci and between biparentally inherited autosomal DNA (aDNA) and matrilineal mitochondrial DNA (mtDNA). Based on multi-locus genomic sequences from aDNA and mtDNA, we inferred the population demography of brown and polar bears and found that brown bears have 6 times (aDNA) or more than 14 times (mtDNA) larger population sizes than polar bears and that polar bear lineage is derived from within brown bear diversity. In brown bears, the effective population size ratio of mtDNA to aDNA was at least 0.62, which deviated from the expected value of 0.25, suggesting matriarchal population due to female philopatry and male-biased migration. These results emphasize that ancestral polymorphisms and sex-biased migration may have contributed to conflicting branching patterns in brown and polar bears across aDNA genes and mtDNA.

Increasing Avermectin Production in Streptomyces avermitilis by Manipulating the Expression of a Novel TetR-Family Regulator and Its Target Gene Product.

Science.gov (United States)

Liu, Wenshuai; Zhang, Qinling; Guo, Jia; Chen, Zhi; Li, Jilun; Wen, Ying

2015-08-01

Avermectins produced by Streptomyces avermitilis are commercially important anthelmintic agents. The detailed regulatory mechanisms of avermectin biosynthesis remain unclear. Here, we identified SAV3619, a TetR-family transcriptional regulator designated AveT, to be an activator for both avermectin production and morphological differentiation in S. avermitilis. AveT was shown to indirectly stimulate avermectin production by affecting transcription of the cluster-situated activator gene aveR. AveT directly repressed transcription of its own gene (aveT), adjacent gene pepD2 (sav_3620), sav_7490 (designated aveM), and sav_7491 by binding to an 18-bp perfect palindromic sequence (CGAAACGKTKYCGTTTCG, where K is T or G and Y is T or C and where the underlining indicates inverted repeats) within their promoter regions. aveM (which encodes a putative transmembrane efflux protein belonging to the major facilitator superfamily [MFS]), the important target gene of AveT, had a striking negative effect on avermectin production and morphological differentiation. Overexpression of aveT and deletion of aveM in wild-type and industrial strains of S. avermitilis led to clear increases in the levels of avermectin production. In vitro gel-shift assays suggested that C-5-O-B1, the late pathway precursor of avermectin B1, acts as an AveT ligand. Taken together, our findings indicate positive-feedback regulation of aveT expression and avermectin production by a late pathway intermediate and provide the basis for an efficient strategy to increase avermectin production in S. avermitilis by manipulation of AveT and its target gene product, AveM. Copyright © 2015, American Society for Microbiology. All Rights Reserved.

Heritability of body size in the polar bears of Western Hudson Bay.

Science.gov (United States)

Malenfant, René M; Davis, Corey S; Richardson, Evan S; Lunn, Nicholas J; Coltman, David W

2018-04-18

Among polar bears (Ursus maritimus), fitness is dependent on body size through males' abilities to win mates, females' abilities to provide for their young and all bears' abilities to survive increasingly longer fasting periods caused by climate change. In the Western Hudson Bay subpopulation (near Churchill, Manitoba, Canada), polar bears have declined in body size and condition, but nothing is known about the genetic underpinnings of body size variation, which may be subject to natural selection. Here, we combine a 4449-individual pedigree and an array of 5,433 single nucleotide polymorphisms (SNPs) to provide the first quantitative genetic study of polar bears. We used animal models to estimate heritability (h 2 ) among polar bears handled between 1966 and 2011, obtaining h 2 estimates of 0.34-0.48 for strictly skeletal traits and 0.18 for axillary girth (which is also dependent on fatness). We genotyped 859 individuals with the SNP array to test for marker-trait association and combined p-values over genetic pathways using gene-set analysis. Variation in all traits appeared to be polygenic, but we detected one region of moderately large effect size in body length near a putative noncoding RNA in an unannotated region of the genome. Gene-set analysis suggested that variation in body length was associated with genes in the regulatory cascade of cyclin expression, which has previously been associated with body size in mice. A greater understanding of the genetic architecture of body size variation will be valuable in understanding the potential for adaptation in polar bear populations challenged by climate change. © 2018 John Wiley & Sons Ltd.

Polarization of photoelectrons produced from atoms by synchrotron radiation

International Nuclear Information System (INIS)

Hughes, V.W.; Lu, D.C.; Huang, K.N.

1981-01-01

The polarization of photoelectrons from stoms has proved to be an important tool for studying correlation effects in atoms, as well as relativistic effects such as the spin-orbit interaction. Extensive experimental and theoretical studies have been made of the Fano effect, which is the production of polarized electrons by photoionization of unpolarized atoms by circularly polarized light. The experiments have dealt mostly with alkali atoms and with photon energies slightly above the ionization thresholds. Measurements that could be made to utilize polarized radiation are discussed

How the embryo makes a limb: determination, polarity and identity.

Science.gov (United States)

Tickle, Cheryll

2015-10-01

The vertebrate limb with its complex anatomy develops from a small bud of undifferentiated mesoderm cells encased in ectoderm. The bud has its own intrinsic polarity and can develop autonomously into a limb without reference to the rest of the embryo. In this review, recent advances are integrated with classical embryology, carried out mainly in chick embryos, to present an overview of how the embryo makes a limb bud. We will focus on how mesoderm cells in precise locations in the embryo become determined to form a limb and express the key transcription factors Tbx4 (leg/hindlimb) or Tbx5 (wing/forelimb). These Tbx transcription factors have equivalent functions in the control of bud formation by initiating a signalling cascade involving Wnts and fibroblast growth factors (FGFs) and by regulating recruitment of mesenchymal cells from the coelomic epithelium into the bud. The mesoderm that will form limb buds and the polarity of the buds is determined with respect to both antero-posterior and dorso-ventral axes of the body. The position in which a bud develops along the antero-posterior axis of the body will also determine its identity - wing/forelimb or leg/hindlimb. Hox gene activity, under the influence of retinoic acid signalling, is directly linked with the initiation of Tbx5 gene expression in the region along the antero-posterior axis of the body that will form wings/forelimbs and determines antero-posterior polarity of the buds. In contrast, Tbx4 expression in the regions that will form legs/hindlimbs is regulated by the homeoprotein Pitx1 and there is no evidence that Hox genes determine antero-posterior polarity of the buds. Bone morphogenetic protein (BMP) signalling determines the region along the dorso-ventral axis of the body in which both wings/forelimbs and legs/hindlimbs develop and dorso-ventral polarity of the buds. The polarity of the buds leads to the establishment of signalling regions - the dorsal and ventral ectoderm, producing Wnts and BMPs

Sensitivity of Gamma-Ray Detectors to Polarization

OpenAIRE

Yadigaroglu, I. -A.

1996-01-01

Previous studies have shown that the largest gamma-ray detector to date, EGRET, does not have useful polarization sensitivity. We have explored here some improved approaches to analyzing gamma-ray pair production events, leading to important gains in sensitivity to polarization. The performance of the next generation gamma-ray instrument GLAST is investigated using a detailed Monte Carlo simulation of the complete detector.

Identification and localization of a gene that specifies production of Escherichia coli DNA topoisomerase I

International Nuclear Information System (INIS)

Trucksis, M.; Depew, R.E.

1981-01-01

A gene that specifies production of Escherichia coli DNA topoisomerase I (ω protein) was identified with the aid of a radioimmunoassay for this protein. E. coli DNA topoisomerase I was produced by Salmonella typhimurium merodiploids that harbored E. coli plasmid F' 123, but not by strains that lost this plasmid. Analysis of strains with spontaneous deletions of F' 123 showed that the gene, topA, required for production of the E. coli ω protein was between the trp operon and the cysB gene. Deletions that eliminated topA also eliminated the supX gene. We suggest that topA is the structural gene of E. coli DNA topoisomerase I and that topA is identical to supX

Efficient production of antibody Fab fragment by transient gene expression in insect cells.

Science.gov (United States)

Mori, Keita; Hamada, Hirotsugu; Ogawa, Takafumi; Ohmuro-Matsuyama, Yuki; Katsuda, Tomohisa; Yamaji, Hideki

2017-08-01

Transient gene expression allows a rapid production of diverse recombinant proteins in early-stage preclinical and clinical developments of biologics. Insect cells have proven to be an excellent platform for the production of functional recombinant proteins. In the present study, the production of an antibody Fab fragment by transient gene expression in lepidopteran insect cells was investigated. The DNA fragments encoding heavy-chain (Hc; Fd fragment) and light-chain (Lc) genes of an Fab fragment were individually cloned into the plasmid vector pIHAneo, which contained the Bombyx mori actin promoter downstream of the B. mori nucleopolyhedrovirus (BmNPV) IE-1 transactivator and the BmNPV HR3 enhancer for high-level expression. Trichoplusia ni BTI-TN-5B1-4 (High Five) cells were co-transfected with the resultant plasmid vectors using linear polyethyleneimine. When the transfection efficiency was evaluated, a plasmid vector encoding an enhanced green fluorescent protein (EGFP) gene was also co-transfected. Transfection and culture conditions were optimized based on both the flow cytometry of the EGFP expression in transfected cells and the yield of the secreted Fab fragments determined by enzyme-linked immunosorbent assay (ELISA). Under optimal conditions, a yield of approximately 120 mg/L of Fab fragments was achieved in 5 days in a shake-flask culture. Transient gene expression in insect cells may offer a promising approach to the high-throughput production of recombinant proteins. Copyright © 2017 The Society for Biotechnology, Japan. Published by Elsevier B.V. All rights reserved.

Disruption of ten protease genes in the filamentous fungus Aspergillus oryzae highly improves production of heterologous proteins.

Science.gov (United States)

Yoon, Jaewoo; Maruyama, Jun-ichi; Kitamoto, Katsuhiko

2011-02-01

Proteolytic degradation by secreted proteases into the culture medium is one of the significant problems to be solved in heterologous protein production by filamentous fungi including Aspergillus oryzae. Double (tppA, and pepE) and quintuple (tppA, pepE, nptB, dppIV, and dppV) disruption of protease genes enhanced human lysozyme (HLY) and bovine chymosin (CHY) production by A. oryzae. In this study, we used a quintuple protease gene disruptant and performed successive rounds of disruption for five additional protease genes (alpA, pepA, AopepAa, AopepAd, and cpI), which were previously investigated by DNA microarray analyses for their expression. Gene disruption was performed by pyrG marker recycling with a highly efficient gene-targeting background (∆ligD) as previously reported. As a result, the maximum yields of recombinant CHY and HLY produced by a decuple protease gene disruptant were approximately 30% and 35%, respectively, higher than those produced by a quintuple protease gene disruptant. Thus, we successfully constructed a decuple protease gene disruptant possessing highly improved capability of heterologous protein production. This is the first report on decuple protease gene disruption that improved the levels of heterologous protein production by the filamentous fungus A. oryzae.

Single gene insertion drives bioalcohol production by a thermophilic archaeon

Energy Technology Data Exchange (ETDEWEB)

Basen, M; Schut, GJ; Nguyen, DM; Lipscomb, GL; Benn, RA; Prybol, CJ; Vaccaro, BJ; Poole, FL; Kelly, RM; Adams, MWW

2014-12-09

Bioethanol production is achieved by only two metabolic pathways and only at moderate temperatures. Herein a fundamentally different synthetic pathway for bioalcohol production at 70 degrees C was constructed by insertion of the gene for bacterial alcohol dehydrogenase (AdhA) into the archaeon Pyrococcus furiosus. The engineered strain converted glucose to ethanol via acetate and acetaldehyde, catalyzed by the host-encoded aldehyde ferredoxin oxidoreductase (AOR) and heterologously expressed AdhA, in an energy-conserving, redox-balanced pathway. Furthermore, the AOR/AdhA pathway also converted exogenously added aliphatic and aromatic carboxylic acids to the corresponding alcohol using glucose, pyruvate, and/or hydrogen as the source of reductant. By heterologous coexpression of a membrane-bound carbon monoxide dehydrogenase, CO was used as a reductant for converting carboxylic acids to alcohols. Redirecting the fermentative metabolism of P. furiosus through strategic insertion of foreign genes creates unprecedented opportunities for thermophilic bioalcohol production. Moreover, the AOR/AdhA pathway is a potentially game-changing strategy for syngas fermentation, especially in combination with carbon chain elongation pathways.

Gene expression changes governing extreme dehydration tolerance in an Antarctic insect

Science.gov (United States)

Teets, Nicholas M.; Peyton, Justin T.; Colinet, Herve; Renault, David; Kelley, Joanna L.; Kawarasaki, Yuta; Lee, Richard E.; Denlinger, David L.

2012-01-01

Among terrestrial organisms, arthropods are especially susceptible to dehydration, given their small body size and high surface area to volume ratio. This challenge is particularly acute for polar arthropods that face near-constant desiccating conditions, as water is frozen and thus unavailable for much of the year. The molecular mechanisms that govern extreme dehydration tolerance in insects remain largely undefined. In this study, we used RNA sequencing to quantify transcriptional mechanisms of extreme dehydration tolerance in the Antarctic midge, Belgica antarctica, the world’s southernmost insect and only insect endemic to Antarctica. Larvae of B. antarctica are remarkably tolerant of dehydration, surviving losses up to 70% of their body water. Gene expression changes in response to dehydration indicated up-regulation of cellular recycling pathways including the ubiquitin-mediated proteasome and autophagy, with concurrent down-regulation of genes involved in general metabolism and ATP production. Metabolomics results revealed shifts in metabolite pools that correlated closely with changes in gene expression, indicating that coordinated changes in gene expression and metabolism are a critical component of the dehydration response. Finally, using comparative genomics, we compared our gene expression results with a transcriptomic dataset for the Arctic collembolan, Megaphorura arctica. Although B. antarctica and M. arctica are adapted to similar environments, our analysis indicated very little overlap in expression profiles between these two arthropods. Whereas several orthologous genes showed similar expression patterns, transcriptional changes were largely species specific, indicating these polar arthropods have developed distinct transcriptional mechanisms to cope with similar desiccating conditions. PMID:23197828

Comparison of spin asymmetries and cross sections in. pi. sup 0 production by 200 GeV polarized antiprotons and protons

Energy Technology Data Exchange (ETDEWEB)

Adams, D L; Corcoran, M D; Cranshaw, J; Nessi-Tedaldi, F; Nessi, M; Nguyen, C; Roberts, J B; Skeens, J; White, J L [Rice Univ., Houston, TX (USA). Bonner Nuclear Labs.; Akchurin, N; Onel, Y [Iowa Univ., Iowa City (USA). Dept. of Physics and Astronomy; Belikov, N I; Derevschikov, A A; Grachov, O A; Matulenko, Yu A; Meschanin, A P; Nurushev, S B; Patalakha, D I; Rykov, V L; Solovyanov, V L; Vasiliev, A N [Institut Fiziki Vysokikh Ehnergij, Serpukhov (USSR); Bystricky, J; Lehar, F; Lesquen, A de [CEA Centre d' Etudes Nucleaires de Saclay, 91 - Gif-sur-Yvette (France); Cossairt, J D; Read, A L [Fermi National Accelerator Lab., Batavia, IL (USA); En' yo, H; Funahashi, H; Goto, Y; Imai, K; Itow, Y; Makino, S; Masaike, A; Miyake, K; Nagamine, T; Saito, N; Yamashita, S [Kyoto Univ. (Japan). Dept. of Physics; Grosnick, D P; Hill, D A; Laghai, M; Lopiano, D; Ohashi, Y; Spinka, H; Underwood, D G; Yokosawa, A [Argonne National Lab., IL (USA); FNAL E581/704 Collaboration

1991-05-23

The single-spin asymmetry A{sub N}(anti pp) for inclusive {pi}{sup 0} production at 0.5 < p{sub t} < 2GeV/c by 200 GeV transversely-polarized antiprotons on protons has been measured at Fermilab over a wide range of x{sub F}. We observe that A{sub N}(anti pp) has the same sign, a similar x{sub F} dependence, and about half the magnitude as A{sub N}(pp) for {pi}{sup 0} production by protons. We also present the ratio of the spin-averaged sections for {pi}{sup 0} production by antiproton and by protons. (orig.).

Diversity, distribution and quantification of antibiotic resistance genes in goat and lamb slaughterhouse surfaces and meat products.

Directory of Open Access Journals (Sweden)

Leyre Lavilla Lerma

Full Text Available The distribution and quantification of tetracycline, sulfonamide and beta-lactam resistance genes were assessed in slaughterhouse zones throughout meat chain production and the meat products; this study represents the first to report quantitatively monitor antibiotic resistance genes (ARG in goat and lamb slaughterhouse using a culture independent approach, since most studies focused on individual bacterial species and their specific resistance types. Quantitative PCR (qPCR revealed a high prevalence of tetracycline resistance genes tetA and tetB in almost all slaughterhouse zones. Sulfonamide resistance genes were largely distributed, while beta-lactam resistance genes were less predominant. Statistical analysis revealed that resistant bacteria, in most cases, were spread by the same route in almost all slaughterhouse zones, except for tetB, blaCTX and blaTEM genes, which occurred in few zones as isolated 'hot spots.' The sum of all analyzed ARG indicated that slaughterhouse surfaces and end products act as reservoirs of ARG, mainly tet genes, which were more prevalent in slaughtering room (SR, cutting room (CR and commercial meat products (MP. Resistance gene patterns suggest they were disseminated throughout slaughterhouse zones being also detected in commercial meat products, with significant correlations between different sampling zones/end products and total resistance in SR, CR and white room (WR zones, and also refrigerator 4 (F4 and MP were observed. Strategically controlling key zones in slaughterhouse (SR, CR and WR by adequate disinfection methods could strategically reduce the risks of ARG transmission and minimize the issues of food safety and environment contamination.

Diversity, distribution and quantification of antibiotic resistance genes in goat and lamb slaughterhouse surfaces and meat products.

Science.gov (United States)

Lavilla Lerma, Leyre; Benomar, Nabil; Knapp, Charles W; Correa Galeote, David; Gálvez, Antonio; Abriouel, Hikmate

2014-01-01

The distribution and quantification of tetracycline, sulfonamide and beta-lactam resistance genes were assessed in slaughterhouse zones throughout meat chain production and the meat products; this study represents the first to report quantitatively monitor antibiotic resistance genes (ARG) in goat and lamb slaughterhouse using a culture independent approach, since most studies focused on individual bacterial species and their specific resistance types. Quantitative PCR (qPCR) revealed a high prevalence of tetracycline resistance genes tetA and tetB in almost all slaughterhouse zones. Sulfonamide resistance genes were largely distributed, while beta-lactam resistance genes were less predominant. Statistical analysis revealed that resistant bacteria, in most cases, were spread by the same route in almost all slaughterhouse zones, except for tetB, blaCTX and blaTEM genes, which occurred in few zones as isolated 'hot spots.' The sum of all analyzed ARG indicated that slaughterhouse surfaces and end products act as reservoirs of ARG, mainly tet genes, which were more prevalent in slaughtering room (SR), cutting room (CR) and commercial meat products (MP). Resistance gene patterns suggest they were disseminated throughout slaughterhouse zones being also detected in commercial meat products, with significant correlations between different sampling zones/end products and total resistance in SR, CR and white room (WR) zones, and also refrigerator 4 (F4) and MP were observed. Strategically controlling key zones in slaughterhouse (SR, CR and WR) by adequate disinfection methods could strategically reduce the risks of ARG transmission and minimize the issues of food safety and environment contamination.

Development of polarized e+ beams for future linear colliders

International Nuclear Information System (INIS)

Chiba, M.; Hamatsu, R.; Endo, A.

1995-01-01

We have so far been carrying out systematic investigations to create polarized e + on the basis of two new methods. One method is to use β + decay of radioactive nuclei with short life-time produced with a proton cyclotron and the other method is to use e + e - pair creation from polarized γ beams made through backward Compton scattering of laser lights. Here we describe technical details on productions of polarized e + and measurements of the polarization. The experiments of producing polarized e + will soon start. Although the e + intensity is not sufficiently high, we will acquire lots of know-how for further development of polarized e + sources with high quality which will possibly be applied to future linear colliders. (author)

The chromosomal arrangement of six soybean leghemoglobin genes

DEFF Research Database (Denmark)

Bojsen, Kirsten; Abildsten, Dorte; Jensen, Erik Ø

1983-01-01

Clones containing six leghemoglobin (Lb) genes have been isolated from two genomic libraries of soybean. They encompass two independent DNA regions: a 40-kb region containing four genes in the order 5' Lba-Lbc(1)-[unk]Lb-Lbc(3) 3' with the same transcriptional polarity, and another 40-kb region...... containing two genes in the order 5' Lbc(4)-Lbc(2) 3' with the same polarity. The order in which the Lb genes are arranged in the soybean genome imply that they are activated in the opposite order to which they are arranged on the chromosome. There is a close similarity between corresponding DNA regions...... differs from that of the Lb genes. The existence of two very similar Lb gene clusters in soybean suggest that soybean may have evolved from an ancestral form by genome duplication. Udgivelsesdato: 1983-null...

A shortest-path graph kernel for estimating gene product semantic similarity

Directory of Open Access Journals (Sweden)

Alvarez Marco A

2011-07-01

Full Text Available Abstract Background Existing methods for calculating semantic similarity between gene products using the Gene Ontology (GO often rely on external resources, which are not part of the ontology. Consequently, changes in these external resources like biased term distribution caused by shifting of hot research topics, will affect the calculation of semantic similarity. One way to avoid this problem is to use semantic methods that are "intrinsic" to the ontology, i.e. independent of external knowledge. Results We present a shortest-path graph kernel (spgk method that relies exclusively on the GO and its structure. In spgk, a gene product is represented by an induced subgraph of the GO, which consists of all the GO terms annotating it. Then a shortest-path graph kernel is used to compute the similarity between two graphs. In a comprehensive evaluation using a benchmark dataset, spgk compares favorably with other methods that depend on external resources. Compared with simUI, a method that is also intrinsic to GO, spgk achieves slightly better results on the benchmark dataset. Statistical tests show that the improvement is significant when the resolution and EC similarity correlation coefficient are used to measure the performance, but is insignificant when the Pfam similarity correlation coefficient is used. Conclusions Spgk uses a graph kernel method in polynomial time to exploit the structure of the GO to calculate semantic similarity between gene products. It provides an alternative to both methods that use external resources and "intrinsic" methods with comparable performance.

Hadron-pair production on transversely polarized targets in semi-inclusive deep inelastic scattering

Energy Technology Data Exchange (ETDEWEB)

Braun, Christopher

2014-07-29

Nucleons such as protons and neutrons are composite objects made of quarks, which are bound together by the strong force via the exchange of gluons. The probability of finding a quark of flavor q carrying the momentum fraction x of the fast moving parent nucleon is described by a parton distribution function (PDF) f{sub 1}{sup q}(x), the number density. The spin, an intrinsic angular momentum of elementary particles such as quarks but also of composite objects like nucleons, couples with magnetic fields, which allows one to align it. Taking into account this additional parameter, the spin, the scheme of PDFs in leading twist is expanded by the helicity distribution g{sub 1}{sup q}(x) and the transversity distribution h{sub 1}{sup q}(x). The first distribution covers the case where the nucleon and the quark are longitudinally polarized, while a transverse polarization is taken into account by the latter. A tool for the investigation of the PDFs is inclusive deep inelastic scattering (DIS) of electro-magnetic probes off (un)polarized nucleons at fixed-target experiments. This only gives access to f{sub 1}{sup q}(x) and g{sub 1}{sup q}(x), while the chiral-odd nature of the transversity distribution prevents a measurement without detecting the final hadronic states. However, h{sub 1}{sup q}(x) can be observed in semi-inclusive DIS (SIDIS) in combination with another chiral-odd function like the dihadron fragmentation function H{sub 1} {sup angle} {sup q} in the production of a hadron-pair. The resulting experimental challenge is the reason why f{sub 1}{sup q}(x) and g{sub 1}{sup q}(x) have been investigated for almost four decades, while h{sub 1}{sup q}(x) is still subject to recent measurements and analyses. The 160 GeV/c polarized muon beam of CERN's M2 beamline allows the COMPASS experiment to investigate spin effects using polarized solid-state targets. Since the year 2002 COMPASS has collected unique data sets on transversely polarized targets of lithium

Implications of the circumpolar genetic structure of polar bears for their conservation in a rapidly warming Arctic.

Directory of Open Access Journals (Sweden)

Elizabeth Peacock

Full Text Available We provide an expansive analysis of polar bear (Ursus maritimus circumpolar genetic variation during the last two decades of decline in their sea-ice habitat. We sought to evaluate whether their genetic diversity and structure have changed over this period of habitat decline, how their current genetic patterns compare with past patterns, and how genetic demography changed with ancient fluctuations in climate. Characterizing their circumpolar genetic structure using microsatellite data, we defined four clusters that largely correspond to current ecological and oceanographic factors: Eastern Polar Basin, Western Polar Basin, Canadian Archipelago and Southern Canada. We document evidence for recent (ca. last 1-3 generations directional gene flow from Southern Canada and the Eastern Polar Basin towards the Canadian Archipelago, an area hypothesized to be a future refugium for polar bears as climate-induced habitat decline continues. Our data provide empirical evidence in support of this hypothesis. The direction of current gene flow differs from earlier patterns of gene flow in the Holocene. From analyses of mitochondrial DNA, the Canadian Archipelago cluster and the Barents Sea subpopulation within the Eastern Polar Basin cluster did not show signals of population expansion, suggesting these areas may have served also as past interglacial refugia. Mismatch analyses of mitochondrial DNA data from polar and the paraphyletic brown bear (U. arctos uncovered offset signals in timing of population expansion between the two species, that are attributed to differential demographic responses to past climate cycling. Mitogenomic structure of polar bears was shallow and developed recently, in contrast to the multiple clades of brown bears. We found no genetic signatures of recent hybridization between the species in our large, circumpolar sample, suggesting that recently observed hybrids represent localized events. Documenting changes in subpopulation

Implications of the circumpolar genetic structure of polar bears for their conservation in a rapidly warming Arctic.

Science.gov (United States)

Peacock, Elizabeth; Sonsthagen, Sarah A; Obbard, Martyn E; Boltunov, Andrei; Regehr, Eric V; Ovsyanikov, Nikita; Aars, Jon; Atkinson, Stephen N; Sage, George K; Hope, Andrew G; Zeyl, Eve; Bachmann, Lutz; Ehrich, Dorothee; Scribner, Kim T; Amstrup, Steven C; Belikov, Stanislav; Born, Erik W; Derocher, Andrew E; Stirling, Ian; Taylor, Mitchell K; Wiig, Øystein; Paetkau, David; Talbot, Sandra L

2015-01-01

We provide an expansive analysis of polar bear (Ursus maritimus) circumpolar genetic variation during the last two decades of decline in their sea-ice habitat. We sought to evaluate whether their genetic diversity and structure have changed over this period of habitat decline, how their current genetic patterns compare with past patterns, and how genetic demography changed with ancient fluctuations in climate. Characterizing their circumpolar genetic structure using microsatellite data, we defined four clusters that largely correspond to current ecological and oceanographic factors: Eastern Polar Basin, Western Polar Basin, Canadian Archipelago and Southern Canada. We document evidence for recent (ca. last 1-3 generations) directional gene flow from Southern Canada and the Eastern Polar Basin towards the Canadian Archipelago, an area hypothesized to be a future refugium for polar bears as climate-induced habitat decline continues. Our data provide empirical evidence in support of this hypothesis. The direction of current gene flow differs from earlier patterns of gene flow in the Holocene. From analyses of mitochondrial DNA, the Canadian Archipelago cluster and the Barents Sea subpopulation within the Eastern Polar Basin cluster did not show signals of population expansion, suggesting these areas may have served also as past interglacial refugia. Mismatch analyses of mitochondrial DNA data from polar and the paraphyletic brown bear (U. arctos) uncovered offset signals in timing of population expansion between the two species, that are attributed to differential demographic responses to past climate cycling. Mitogenomic structure of polar bears was shallow and developed recently, in contrast to the multiple clades of brown bears. We found no genetic signatures of recent hybridization between the species in our large, circumpolar sample, suggesting that recently observed hybrids represent localized events. Documenting changes in subpopulation connectivity will allow

Implications of the circumpolar genetic structure of polar bears for their conservation in a rapidly warming Arctic

Science.gov (United States)

Peacock, Elizabeth; Sonsthagen, Sarah A.; Obbard, Martyn E.; Boltunov, Andrei N.; Regehr, Eric V.; Ovsyanikov, Nikita; Aars, Jon; Atkinson, Stephen N.; Sage, George K.; Hope, Andrew G.; Zeyl, Eve; Bachmann, Lutz; Ehrich, Dorothee; Scribner, Kim T.; Amstrup, Steven C.; Belikov, Stanislav; Born, Erik W.; Derocher, Andrew E.; Stirling, Ian; Taylor, Mitchell K.; Wiig, Øystein; Paetkau, David; Talbot, Sandra L.

2015-01-01

We provide an expansive analysis of polar bear (Ursus maritimus) circumpolar genetic variation during the last two decades of decline in their sea-ice habitat. We sought to evaluate whether their genetic diversity and structure have changed over this period of habitat decline, how their current genetic patterns compare with past patterns, and how genetic demography changed with ancient fluctuations in climate. Characterizing their circumpolar genetic structure using microsatellite data, we defined four clusters that largely correspond to current ecological and oceanographic factors: Eastern Polar Basin, Western Polar Basin, Canadian Archipelago and Southern Canada. We document evidence for recent (ca. last 1–3 generations) directional gene flow from Southern Canada and the Eastern Polar Basin towards the Canadian Archipelago, an area hypothesized to be a future refugium for polar bears as climate-induced habitat decline continues. Our data provide empirical evidence in support of this hypothesis. The direction of current gene flow differs from earlier patterns of gene flow in the Holocene. From analyses of mitochondrial DNA, the Canadian Archipelago cluster and the Barents Sea subpopulation within the Eastern Polar Basin cluster did not show signals of population expansion, suggesting these areas may have served also as past interglacial refugia. Mismatch analyses of mitochondrial DNA data from polar and the paraphyletic brown bear (U. arctos) uncovered offset signals in timing of population expansion between the two species, that are attributed to differential demographic responses to past climate cycling. Mitogenomic structure of polar bears was shallow and developed recently, in contrast to the multiple clades of brown bears. We found no genetic signatures of recent hybridization between the species in our large, circumpolar sample, suggesting that recently observed hybrids represent localized events. Documenting changes in subpopulation connectivity will

Direct Probes of Linearly Polarized Gluons inside Unpolarized Hadrons

NARCIS (Netherlands)

Boer, D.; Brodsky, S. J.; Mulders, P.J.G.; Pisano, C.

2011-01-01

We show that linearly polarized gluons inside unpolarized hadrons can be directly probed in jet or heavy quark pair production in electron-hadron collisions. We discuss the simplest cos2 asymmetries and estimate their maximal value, concluding that measurements of the unknown linearly polarized

Spin dependent fragmentation functions for heavy flavor baryons and single heavy hyperon polarization

CERN Document Server

Goldstein, G R

2001-01-01

Spin dependent fragmentation functions for heavy flavor quarks to fragment into heavy baryons are calculated in a quark-diquark model. The production of intermediate spin 1/2 and 3/2 excited states is explicity included. $\\Lambda_b$ , $\\Lambda_c$ and $\\Xi_c$ production rate and polarization at LEP energies are calculated and, where possible, compared with experiment. A different approach, also relying on a heavy quark-diquark model, is proposed for the small momentum transfer inclusive production of polarized heavy flavor hyperons. The predicted $\\Lambda_c$ polarization is roughly in agreement with experiment.

Polarized e-e+ physics in linear colliders

International Nuclear Information System (INIS)

Prescott, C.Y.

1980-11-01

Electroweak interactions at high energies are expected to be dominated by spin-dependent forces. Recent advances in the production of polarized electron beams in linear machines provide the opportunity for studying these spin-dependent effects. Polarized e - e + annihilation at the Z 0 pole can provide precise measurements of neutral current parameters and the best experimental challenge to the standard model of electroweak interactions

Regulation of metabolic products and gene expression in Fusarium asiaticum by agmatine addition.

Science.gov (United States)

Suzuki, Tadahiro; Kim, Young-Kyung; Yoshioka, Hifumi; Iwahashi, Yumiko

2013-05-01

The metabolic products resulting from the cultivation of F. asiaticum in agmatine were identified using capillary electrophoresis-time of flight mass spectrometry. Glyoxylic acid was detected from fungal cultures grown in agmatine, while it was absent in control cells. The abundance of other metabolic products of the glycolytic pathway also increased because of agmatine; however, there was no increase in the amounts of pyruvic acid or metabolites from the tricarboxylic acid cycle. Moreover, gene expression levels within Fusarium asiaticum exposed to agmatine were analyzed by DNA microarray. Changes in gene expression levels directed the changes in metabolic products. Our results suggest that acetyl coenzyme A, which is a starting substrate for the biosynthesis of deoxynivalenol (DON), was simultaneously produced by activated β-oxidation. Furthermore, the content of 4-aminobutyrate (GABA) was increased in the agmatine addition culture medium. GABA can be synthesized from agmatine through putrescine and might influence the regulation of DON-related genes.

Polarized cellular patterns of endocannabinoid production and detection shape cannabinoid signaling in neurons

Directory of Open Access Journals (Sweden)

Delphine eLadarre

2015-01-01

Full Text Available Neurons display important differences in plasma membrane composition between somatodendritic and axonal compartments, potentially leading to currently unexplored consequences in G-protein-coupled-receptor signaling. Here, by using highly-resolved biosensor imaging to measure local changes in basal levels of key signaling components, we explored features of type-1 cannabinoid receptor (CB1R signaling in individual axons and dendrites of cultured rat hippocampal neurons. Activation of endogenous CB1Rs led to rapid, Gi/o-protein- and cAMP-mediated decrease of cyclic-AMP-dependent protein kinase (PKA activity in the somatodendritic compartment. In axons, PKA inhibition was significantly stronger, in line with axonally-polarized distribution of CB1Rs. Conversely, inverse agonist AM281 produced marked rapid increase of basal PKA activation in somata and dendrites, but not in axons, removing constitutive activation of CB1Rs generated by local production of the endocannabinoid 2-arachidonoylglycerol (2-AG. Interestingly, somatodendritic 2-AG levels differently modified signaling responses to CB1R activation by Δ9-THC, the psychoactive compound of marijuana, and by the synthetic cannabinoids WIN55,212-2 and CP55,940. These highly contrasted differences in sub-neuronal signaling responses warrant caution in extrapolating pharmacological profiles, which are typically obtained in non-polarized cells, to predict in vivo responses of axonal (i.e. presynaptic GPCRs. Therefore, our results suggest that enhanced comprehension of GPCR signaling constraints imposed by neuronal cell biology may improve the understanding of neuropharmacological action.

Metabolic engineering of Escherichia coli for ethanol production without foreign genes

Science.gov (United States)

Kim, Youngnyun

Worldwide dependence on finite petroleum-based energy necessitates alternative energy sources that can be produced from renewable resources. A successful example of an alternative transportation fuel is bioethanol, produced by microorganisms, from corn starch that is blended with gasoline. However, corn, currently the main feedstock for bioethanol production, also occupies a significant role in human food and animal feed chains. As more corn is diverted to bioethanol, the cost of corn is expected to increase with an increase in the price of food, feed and ethanol. Using lignocellulosic biomass for ethanol production is considered to resolve this problem. However, this requires a microbial biocatalyst that can ferment hexoses and pentoses to ethanol. Escherichia coli is an efficient biocatalyst that can use all the monomeric sugars in lignocellulose, and recombinant derivatives of E. coli have been engineered to produce ethanol as the major fermentation product. In my study, ethanologenic E. coli strains were isolated from a ldhA-, pflB- derivative without introduction of foreign genes. These isolates grew anaerobically and produced ethanol as the main fermentation product. The mutation responsible for anaerobic growth and ethanol production was mapped in the lpdA gene and the mutation was identified as E354K in three of the isolates tested. Another three isolates carried an lpdA mutation, H352Y. Enzyme kinetic studies revealed that the mutated form of the dihydrolipoamide dehydrogenase (LPD) encoded by the lpdA was significantly less sensitive to NADH inhibition than the native LPD. This reduced NADH sensitivity of the mutated LPD was translated into lower sensitivity to NADH of the pyruvate dehydrogenase complex in strain SE2378. The net yield of 4 moles of NADH and 2 moles of acetyl-CoA per mole of glucose produced by a combination of glycolysis and PDH provided a logical basis to explain the production of 2 moles of ethanol per glucose. The development of E

Polarized heavy baryon production in quark-diquark model considering two different scenarios

Energy Technology Data Exchange (ETDEWEB)

Moosavi Nejad, S.M. [Yazd University, Faculty of Physics, Yazd (Iran, Islamic Republic of); Institute for Research in Fundamental Sciences (IPM), School of Particles and Accelerators, Tehran (Iran, Islamic Republic of); Delpasand, M. [Yazd University, Faculty of Physics, Yazd (Iran, Islamic Republic of)

2017-09-15

At sufficiently large transverse momentum, the dominant production mechanism for heavy baryons is actually the fragmentation. In this work, we first study the direct fragmentation of a heavy quark into the unpolarized triply heavy baryons in the leading order of perturbative QCD. In a completely different approach, we also analyze the two-stage fragmentation of a heavy quark into a scalar diquark followed by the fragmentation of such a scalar diquark into a triply heavy baryon: quark-diquark model of baryons. The results of this model are in acceptable agreement with those obtained through a full perturbative regime. Relying on the quark-diquark model and considering two different scenarios we determine the spin-dependent fragmentation functions of polarized heavy baryons in such a way that a vector or a pseudoscalar heavy diquark is an intermediate particle between the initial heavy quark and the final state baryon. (orig.)

A Kinome RNAi Screen in Drosophila Identifies Novel Genes Interacting with Lgl, aPKC, and Crb Cell Polarity Genes in Epithelial Tissues

NARCIS (Netherlands)

Parsons, Linda M.; Grzeschik, Nicola A; Amaratunga, Kasun; Burke, Peter; Quinn, Leonie M; Richardson, Helena E

2017-01-01

In both Drosophila melanogaster and mammalian systems, epithelial structure and underlying cell polarity are essential for proper tissue morphogenesis and organ growth. Cell polarity interfaces with multiple cellular processes that are regulated by the phosphorylation status of large protein

Physics with polarized electron beams

International Nuclear Information System (INIS)

Swartz, M.L.

1988-06-01

As a distinct field, elementary particle physics is now approximately forty years old. In all that time, only a few of the thousands of experiments that have been performed have made use of spin polarized particle beams. There are two reasons for this lack of interest. The first is that spin polarized beams are difficult to produce, accelerate, and transport. The second reason is that any physical process that can occur during the collision of a polarized particle with another (polarized or not) can also occur during the collision of unpolarized particles. One might ask then, why has any effort been expended on the subject? The answer, at least in the case of polarized electron beams, is that electron accelerators and storage rings have in recent years achieved sufficient energy to begin to probe the weak interaction directly. The weak interaction distinguishes between left- and right-handed fermionic currents. Left-handed particles interact in a fundamentally different way than their right-handed counterparts. If the experimenter wishes to explore or exploit this difference, he (or she) must either prepare the spin state of the incident particles or analyze the spin state of outgoing particles. For reasons, of generality and improved statistical precision, the former is usually preferable to the latter. The first of these lectures will review some of the techniques necessary for the production, transport, and monitoring of polarized electron (or positron) beams. The second lecture will survey some of the physics possibilities of polarized electron--positron collisions. 33 refs., 26 figs., 5 tabs

Use of galerina marginata genes and proteins for peptide production

Science.gov (United States)

Hallen-Adams, Heather E.; Scott-Craig, John S.; Walton, Jonathan D.; Luo, Hong

2018-04-03

The present invention relates to compositions and methods comprising genes and peptides associated with cyclic peptides and cyclic peptide production in mushrooms. In particular, the present invention relates to using genes and proteins from Galerina species encoding peptides specifically relating to amatoxins in addition to proteins involved with processing cyclic peptide toxins. In a preferred embodiment, the present invention also relates to methods for making small peptides and small cyclic peptides including peptides similar to amanitin. Further, the present inventions relate to providing kits for making small peptides.

Use of Galerina marginata genes and proteins for peptide production

Energy Technology Data Exchange (ETDEWEB)

Hallen-Adams, Heather E.; Scott-Craig, John S.; Walton, Jonathan D.; Luo, Hong

2017-03-21

The present invention relates to compositions and methods comprising genes and peptides associated with cyclic peptides and cyclic peptide production in mushrooms. In particular, the present invention relates to using genes and proteins from Galerina species encoding peptides specifically relating to amatoxins in addition to proteins involved with processing cyclic peptide toxins. In a preferred embodiment, the present invention also relates to methods for making small peptides and small cyclic peptides including peptides similar to amanitin. Further, the present inventions relate to providing kits for making small peptides.

Characterization of the cell polarity gene crumbs during the early development and maintenance of the squid-vibrio light organ symbiosis.

Science.gov (United States)

Peyer, Suzanne M; Heath-Heckman, Elizabeth A C; McFall-Ngai, Margaret J

2017-11-01

The protein Crumbs is a determinant of apical-basal cell polarity and plays a role in apoptosis of epithelial cells and their protection against photodamage. Using the squid-vibrio system, a model for development of symbiotic partnerships, we examined the modulation of the crumbs gene in host epithelial tissues during initiation and maintenance of the association. The extracellular luminous symbiont Vibrio fischeri colonizes the apical surfaces of polarized epithelia in deep crypts of the Euprymna scolopes light organ. During initial colonization each generation, symbiont harvesting is potentiated by the biochemical and biophysical activity of superficial ciliated epithelia, which are several cell layers from the crypt epithelia where the symbionts reside. Within hours of crypt colonization, the symbionts induce the cell death mediated regression of the remote superficial ciliated fields. However, the crypt cells directly interacting with the symbiont are protected from death. In the squid host, we characterized the gene and encoded protein during light organ morphogenesis and in response to symbiosis. Features of the protein sequence and structure, phylogenetic relationships, and localization patterns in the eye supported assignment of the squid protein to the Crumbs family. In situ hybridization revealed that the crumbs transcript shows opposite expression at the onset of symbiosis in the two different regions of the light organ: elevated levels in the superficial epithelia were attenuated whereas low levels in the crypt epithelia were turned up. Although a rhythmic association in which the host controls the symbiont population over the day-night cycle begins in the juvenile upon colonization, cycling of crumbs was evident only in the adult organ with peak expression coincident with maximum symbiont population and luminescence. Our results provide evidence that crumbs responds to symbiont cues that induce developmental apoptosis and to symbiont population

Id-1 and Id-2 genes and products as markers of epithelial cancer

Science.gov (United States)

Desprez, Pierre-Yves [El Cerrito, CA; Campisi, Judith [Berkeley, CA

2008-09-30

A method for detection and prognosis of breast cancer and other types of cancer. The method comprises detecting expression, if any, for both an Id-1 and an Id-2 genes, or the ratio thereof, of gene products in samples of breast tissue obtained from a patient. When expressed, Id-1 gene is a prognostic indicator that breast cancer cells are invasive and metastatic, whereas Id-2 gene is a prognostic indicator that breast cancer cells are localized and noninvasive in the breast tissue.

Mycobacterium tuberculosislpdC, Rv0462, induces dendritic cell maturation and Th1 polarization

Energy Technology Data Exchange (ETDEWEB)

Heo, Deok Rim [Department of Microbiology and Immunology, School of Medicine, Pusan National University, Beom-eo Ri, Mulgum Eop, Yangsan, Gyeongsangnam-do 626-770 (Korea, Republic of); Shin, Sung Jae; Kim, Woo Sik [Department of Microbiology, College of Medicine, Chungnam National University, Munwha-Dong, Jung-Ku, Daejeon 301-747 (Korea, Republic of); Noh, Kyung Tae; Park, Jin Wook; Son, Kwang Hee [Department of Microbiology and Immunology, School of Medicine, Pusan National University, Beom-eo Ri, Mulgum Eop, Yangsan, Gyeongsangnam-do 626-770 (Korea, Republic of); Park, Won Sun [Department of Physiology, Kangwon National University, School of Medicine, Chuncheon 200-701 (Korea, Republic of); Lee, Min-Goo [Department of Physiology, Korea University, College of Medicine, Anam-dong, Sungbuk-Gu, Seoul 136-705 (Korea, Republic of); Kim, Daejin [Department of Anatomy, Chung-Ang University, College of Medicine, 221 Heuksuk-Dong, Dongjak-Ku, Seoul 156-756 (Korea, Republic of); Shin, Yong Kyoo [Department of Pharmacology, Chung-Ang University, College of Medicine, 221 Heuksuk-Dong, Dongjak-Ku, Seoul 156-756 (Korea, Republic of); Jung, In Duk, E-mail: jungid@pusan.ac.kr [Department of Microbiology and Immunology, School of Medicine, Pusan National University, Beom-eo Ri, Mulgum Eop, Yangsan, Gyeongsangnam-do 626-770 (Korea, Republic of); Research Institute of Convergence of Biomedical Science and Technology, Pusan National University Yangsan Hospital, Beom-eo Ri, Mulgum Eop, Yangsan, Gyeongsangnam-do 626-770 (Korea, Republic of); Park, Yeong-Min, E-mail: immunpym@pusan.ac.kr [Department of Microbiology and Immunology, School of Medicine, Pusan National University, Beom-eo Ri, Mulgum Eop, Yangsan, Gyeongsangnam-do 626-770 (Korea, Republic of); Research Institute of Convergence of Biomedical Science and Technology, Pusan National University Yangsan Hospital, Beom-eo Ri, Mulgum Eop, Yangsan, Gyeongsangnam-do 626-770 (Korea, Republic of)

2011-08-05

Highlights: {yields} Treatment with Rv0462 induces the expression of surface molecules and the production of cytokines in DCs. {yields} Rv0462 induces the activation of MAPKs. {yields} Rv0462-treated DCs enhances the proliferation of CD4{sup +} T cells. -- Abstract: Mycobacterium tuberculosis, the etiological factor of pulmonary tuberculosis, causes significant morbidity and mortality worldwide. Activation of host immune responses for containment of mycobacterial infections involves participation of innate immune cells, such as dendritic cells (DCs). In this study, we demonstrated that the gene encoding lipoamide dehydrogenase C (lpdC) from M. tuberculosis, Rv0462, induce maturation and activation of DCs involved in the MAPKs signaling pathway. Moreover, Rv0462-treated DCs activated naive T cells, polarized CD4{sup +} and CD8{sup +} T cells to secrete IFN-{gamma} in syngeneic mixed lymphocyte reactions, which would be expected to contribute to Th1 polarization of the immune response. Our results suggest that Rv0462 can contribute to the innate and adaptive immune responses during tuberculosis infection, and thus modulate the clinical course of tuberculosis.

Mycobacterium tuberculosislpdC, Rv0462, induces dendritic cell maturation and Th1 polarization

International Nuclear Information System (INIS)

Heo, Deok Rim; Shin, Sung Jae; Kim, Woo Sik; Noh, Kyung Tae; Park, Jin Wook; Son, Kwang Hee; Park, Won Sun; Lee, Min-Goo; Kim, Daejin; Shin, Yong Kyoo; Jung, In Duk; Park, Yeong-Min

2011-01-01

Highlights: → Treatment with Rv0462 induces the expression of surface molecules and the production of cytokines in DCs. → Rv0462 induces the activation of MAPKs. → Rv0462-treated DCs enhances the proliferation of CD4 + T cells. -- Abstract: Mycobacterium tuberculosis, the etiological factor of pulmonary tuberculosis, causes significant morbidity and mortality worldwide. Activation of host immune responses for containment of mycobacterial infections involves participation of innate immune cells, such as dendritic cells (DCs). In this study, we demonstrated that the gene encoding lipoamide dehydrogenase C (lpdC) from M. tuberculosis, Rv0462, induce maturation and activation of DCs involved in the MAPKs signaling pathway. Moreover, Rv0462-treated DCs activated naive T cells, polarized CD4 + and CD8 + T cells to secrete IFN-γ in syngeneic mixed lymphocyte reactions, which would be expected to contribute to Th1 polarization of the immune response. Our results suggest that Rv0462 can contribute to the innate and adaptive immune responses during tuberculosis infection, and thus modulate the clinical course of tuberculosis.

First results for the two-spin parameter A sub LL in. pi. sup 0 production by 200 GeV polarized protons and antiprotons

Energy Technology Data Exchange (ETDEWEB)

Adams, D L; Corcoran, M D; Cranshaw, J; Nessi-Tedaldi, F; Nessi, M; Nguyen, C; Roberts, J B; Skeens, J; White, J L [Rice Univ., Houston, TX (USA). Bonner Nuclear Labs.; Akchurin, N; Onel, Y [Iowa Univ., Iowa City (USA). Dept. of Physics and Astronomy; Belikov, N I; Derevschikov, A A; Grachov, O A; Matulenko, Yu A; Meschanin, A P; Nurushev, S B; Patalakha, D I; Rykov, V L; Solovyanov, V L; Vasiliev, A N [Institut Fiziki Vysokikh Ehnergij, Serpukhov (USSR); Bystricky, J; Chaumette, P; Deregel, J; Durand, G; Fabre, J; Lehar, F; Lesquen, A de [CEA Centre d' Etudes Nucleaires de Saclay, 91 - Gif-sur-Yvette (France); Cossairt, J D; Read, A L [Fermi National Accelerator Lab., Batavia, IL (USA); En' yo, H; Funahashi, H; Goto, Y; Imai, K; Itow, Y; Makino, S; Masaike, A; Miyake, K; Nagamine, T; Saito, N; Yamashita, S [Kyoto Univ. (Japan). Dept. of Physics; Fukuda, K [Meiji Coll. of Oriental Medicine, Kyoto (Japan); Grosnick, D P; Hill, D A; FNAL E581/704 Collaboration

1991-05-23

The two-spin parameter A{sub LL} in inclusive {pi}{sup 0} production by longitudinally-polarized protons and antiprotons on a longitudinally-polarized proton target has been measured at the 200 GeV Fermilab spin physics facility, for {pi}{sup 0}'s at x{sub F} = 0 with 1 {le} p{sub t} {le} 3 GeV/c. The results exclude, at the 95% confidence level, values of A{sub LL} (pp) > 0.1 and < -0.1, for {pi}{sup 0}'s produced by protons, and values of A{sub LL} (anti pp) > 0.1 and < -0.2 for incident antiprotons. The relevance of A{sub LL}(pp) for the gluon spin density is discussed. The data are in good agreement with 'conventional' small or zero, gluon polarization. (orig.).

EpsA is an essential gene in exopolysaccharide production in Lactobacillus johnsonii FI9785.

Science.gov (United States)

Dertli, Enes; Mayer, Melinda J; Colquhoun, Ian J; Narbad, Arjan

2016-07-01

Lactobacillus johnsonii FI9785 has an eps gene cluster which is required for the biosynthesis of homopolymeric exopolysaccharides (EPS)-1 and heteropolymeric EPS-2 as a capsular layer. The first gene of the cluster, epsA, is the putative transcriptional regulator. In this study we showed the crucial role of epsA in EPS biosynthesis by demonstrating that deletion of epsA resulted in complete loss of both EPS-1 and EPS-2 on the cell surface. Plasmid complementation of the epsA gene fully restored EPS production, as confirmed by transmission electron microscopy and nuclear magnetic resonance (NMR) analysis. Furthermore, this complementation resulted in a twofold increase in the expression levels of this gene, which almost doubled amounts of EPS production in comparison with the wild-type strain. Analysis of EPS by NMR showed an increased ratio of the heteropolysaccharide to homopolysaccharide in the complemented strain and allowed identification of the acetylated residue in EPS-2 as the (1,4)-linked βGlcp unit, with the acetyl group located at O-6. These findings indicate that epsA is a positive regulator of EPS production and that EPS production can be manipulated by altering its expression. © 2015 The Authors. Microbial Biotechnology published by John Wiley & Sons Ltd and Society for Applied Microbiology.

Expression of nm23-H1 gene product in esophageal squamous cell carcinoma and its association with vessel invasion and survival

International Nuclear Information System (INIS)

Tomita, Masaki; Ayabe, Takanori; Matsuzaki, Yasunori; Edagawa, Masao; Maeda, Masayuki; Shimizu, Tetsuya; Hara, Masaki; Onitsuka, Toshio

2001-01-01

We assessed the nm23-H1 gene product expression and its relationship with lymphatic and blood vessel invasion in patients with esophageal squamous cell carcinoma. Formalin-fixed and paraffin-embedded tissue sections from 45 patients who were treated surgically were used in this study. Pathologists graded lymphatic and blood vessel invasion in each of the tissue samples. Expression of nm23-Hl gene product was determined using a specific monoclonal antibody. Expression of nm23-H1 gene product was present in 17 (37.8%) cases. We found an inverse correlation between nm23-H1 gene product expression and lymphatic vessel invasion, whereas no correlation between nm23-H1 gene product expression and blood vessel invasion. Overall survival rate was not different between nm23-H1 gene product positive and negative patients (p = 0.21). However, reduced expression of nm23-H1 gene product was associated with shorter overall survival in patients with involved lymph nodes (p < 0.05), but not in patients without involved lymph nodes (p = 0.87). In patients with esophageal squamous cell carcinoma, there appears to be an inverse relationship between nm23-H1 gene product expression and lymphatic vessel invasion. Furthermore, nm23-H1 gene product expression might be a prognostic marker in patients with involved lymph nodes. Our data does not demonstrate any correlation between nm23-H1 gene product expression and blood vessel invasion

Polarization of lanthanum nucleus by dynamic polarization method

International Nuclear Information System (INIS)

Adachi, Toshikazu; Ishimoto, Shigeru; Masuda, Yasuhiro; Morimoto, Kimio

1989-01-01

Preliminary studies have been carried out concerning the application of a dynamic polarization method to polarizing lanthanum fluoride single crystal to be employed as target in experiments with time reversal invariance. The present report briefly outlines the dynamic polarization method and describes some preliminary studies carried out so far. Dynamic polarization is of particular importance because no techniques are currently available that can produce highly polarized static nucleus. Spin interaction between electrons and protons (nuclei) plays a major role in the dynamic polarization method. In a thermal equilibrium state, electrons are polarized almost completely while most protons are not polarized. Positively polarized proton spin is produced by applying microwave to this system. The most hopeful candidate target material is single crystal of LaF 3 containing neodymium because the crystal is chemically stable and easy to handle. The spin direction is of great importance in experiments with time reversal invariance. The spin of neutrons in the target can be cancelled by adjusting the external magnetic field applied to a frozen polarized target. In a frozen spin state, the polarity decreases slowly with a relaxation time that depends on the external magnetic field and temperature. (N.K.)

Measurement of the polarization amplitudes and triple product asymmetries in the B{sub s}{sup 0}{yields}{phi}{phi} decay

Energy Technology Data Exchange (ETDEWEB)

Aaij, R. [Nikhef National Institute for Subatomic Physics, Amsterdam (Netherlands); Abellan Beteta, C. [Universitat de Barcelona, Barcelona (Spain); Adeva, B. [Universidad de Santiago de Compostela, Santiago de Compostela (Spain); Adinolfi, M. [H.H. Wills Physics Laboratory, University of Bristol, Bristol (United Kingdom); Adrover, C. [CPPM, Aix-Marseille Universite, CNRS/IN2P3, Marseille (France); Affolder, A. [Oliver Lodge Laboratory, University of Liverpool, Liverpool (United Kingdom); Ajaltouni, Z. [Clermont Universite, Universite Blaise Pascal, CNRS/IN2P3, LPC, Clermont-Ferrand (France); Albrecht, J.; Alessio, F. [European Organization for Nuclear Research (CERN), Geneva (Switzerland); Alexander, M. [School of Physics and Astronomy, University of Glasgow, Glasgow (United Kingdom); Ali, S. [Nikhef National Institute for Subatomic Physics, Amsterdam (Netherlands); Alkhazov, G. [Petersburg Nuclear Physics Institute (PNPI), Gatchina (Russian Federation); Alvarez Cartelle, P. [Universidad de Santiago de Compostela, Santiago de Compostela (Spain); Alves, A.A. [Sezione INFN di Roma La Sapienza, Roma (Italy); Amato, S. [Universidade Federal do Rio de Janeiro (UFRJ), Rio de Janeiro (Brazil); Amhis, Y. [Ecole Polytechnique Federale de Lausanne (EPFL), Lausanne (Switzerland); Anderson, J. [Physik-Institut, Universitaet Zuerich, Zuerich (Switzerland); Appleby, R.B. [School of Physics and Astronomy, University of Manchester, Manchester (United Kingdom); Aquines Gutierrez, O. [Max-Planck-Institut fuer Kernphysik (MPIK), Heidelberg (Germany); Archilli, F. [Laboratori Nazionali dell' INFN di Frascati, Frascati (Italy); European Organization for Nuclear Research (CERN), Geneva (Switzerland); and others

2012-07-18

Using 1.0 fb{sup -1} of pp collision data collected at a centre-of-mass energy of {radical}(s)=7 TeV with the LHCb detector, measurements of the polarization amplitudes, strong phase difference and triple product asymmetries in the B{sub s}{sup 0}{yields}{phi}{phi} decay mode are presented. The measured values are (table)

The Geissen polarization facility. I

International Nuclear Information System (INIS)

Arnold, W.; Berg, H.; Krause, H.H.; Ulbricht, J.; Clausnitzer, G.

1977-01-01

A source for the production of polarized negative hydrogen or deuterium ions following the Lambshift method is described. A duoplasmatron with expansion cup and extended ion optics is used. The polarization is generated by a diabetic zero field passage of the metastable atoms. For precision experiments the polarization can be switched 'on' and 'off' with a frequency of 1 kHz by a disturbance with a transverse magnetic field. The quantization axis can be rotated with a Wien filter. All source components are installed in a compact vacuum chamber, which allows high effective pumping speeds. The overal length of the source including the Wien filter is 1.7m. With a 10mm diameter cesium canal typical H - currents of 0.6-0.75 μA (P=0.7-0.75) and maximum currents of 0.9μA are obtained. (Auth.)

Polarized neutrons

International Nuclear Information System (INIS)

Williams, W.G.

1988-01-01

The book on 'polarized neutrons' is intended to inform researchers in condensed matter physics and chemistry of the diversity of scientific problems that can be investigated using polarized neutron beams. The contents include chapters on:- neutron polarizers and instrumentation, polarized neutron scattering, neutron polarization analysis experiments and precessing neutron polarization. (U.K.)

Comparative analysis of fecal microbiota and intestinal microbial metabolic activity in captive polar bears.

Science.gov (United States)

Schwab, Clarissa; Gänzle, Michael

2011-03-01

The composition of the intestinal microbiota depends on gut physiology and diet. Ursidae possess a simple gastrointestinal system composed of a stomach, small intestine, and indistinct hindgut. This study determined the composition and stability of fecal microbiota of 3 captive polar bears by group-specific quantitative PCR and PCR-DGGE (denaturing gradient gel electrophoresis) using the 16S rRNA gene as target. Intestinal metabolic activity was determined by analysis of short-chain fatty acids in feces. For comparison, other Carnivora and mammals were included in this study. Total bacterial abundance was approximately log 8.5 DNA gene copies·(g feces)-1 in all 3 polar bears. Fecal polar bear microbiota was dominated by the facultative anaerobes Enterobacteriaceae and enterococci, and the Clostridium cluster I. The detection of the Clostridium perfringens α-toxin gene verified the presence of C. perfringens. Composition of the fecal bacterial population was stable on a genus level; according to results obtained by PCR-DGGE, dominant bacterial species fluctuated. The total short-chain fatty acid content of Carnivora and other mammals analysed was comparable; lactate was detected in feces of all carnivora but present only in trace amounts in other mammals. In comparison, the fecal microbiota and metabolic activity of captive polar bears mostly resembled the closely related grizzly and black bears.

Gene deletion of cytosolic ATP: citrate lyase leads to altered organic acid production in Aspergillus niger

DEFF Research Database (Denmark)

Meijer, Susan Lisette; Nielsen, Michael Lynge; Olsson, Lisbeth

2009-01-01

With the availability of the genome sequence of the filamentous fungus Aspergillus niger, the use of targeted genetic modifications has become feasible. This, together with the fact that A. niger is well established industrially, makes this fungus an attractive micro-organism for creating a cell...... factory platform for production of chemicals. Using molecular biology techniques, this study focused on metabolic engineering of A. niger to manipulate its organic acid production in the direction of succinic acid. The gene target for complete gene deletion was cytosolic ATP: citrate lyase (acl), which...... the acl gene. Additionally, the total amount of organic acids produced in the deletion strain was significantly increased. Genome-scale stoichiometric metabolic model predictions can be used for identifying gene targets. Deletion of the acl led to increased succinic acid production by A. niger....

Estrogen Signaling Contributes to Sex Differences in Macrophage Polarization during Asthma.

Science.gov (United States)

Keselman, Aleksander; Fang, Xi; White, Preston B; Heller, Nicola M

2017-09-01

Allergic asthma is a chronic Th2 inflammation in the lungs that constricts the airways and presents as coughing and wheezing. Asthma mostly affects boys in childhood and women in adulthood, suggesting that shifts in sex hormones alter the course of the disease. Alveolar macrophages have emerged as major mediators of allergic lung inflammation in animal models as well as humans. Whether sex differences exist in macrophage polarization and the molecular mechanism(s) that drive differential responses are not well understood. We found that IL-4-stimulated bone marrow-derived and alveolar macrophages from female mice exhibited greater expression of M2 genes in vitro and after allergen challenge in vivo. Alveolar macrophages from female mice exhibited greater expression of the IL-4Rα and estrogen receptor (ER) α compared with macrophages from male mice following allergen challenge. An ERα-specific agonist enhanced IL-4-induced M2 gene expression in macrophages from both sexes, but more so in macrophages from female mice. Furthermore, IL-4-stimulated macrophages from female mice exhibited more transcriptionally active histone modifications at M2 gene promoters than did macrophages from male mice. We found that supplementation of estrogen into ovariectomized female mice enhanced M2 polarization in vivo upon challenge with allergen and that macrophage-specific deletion of ERα impaired this M2 polarization. The effects of estrogen are long-lasting; bone marrow-derived macrophages from ovariectomized mice implanted with estrogen exhibited enhanced IL-4-induced M2 gene expression compared with macrophages from placebo-implanted littermates. Taken together, our findings suggest that estrogen enhances IL-4-induced M2 gene expression and thereby contributes to sex differences observed in asthma. Copyright © 2017 by The American Association of Immunologists, Inc.

Genes related to xylose fermentation and methods of using same for enhanced biofuel production

Science.gov (United States)

Wohlbach, Dana J.; Gasch, Audrey P.

2014-08-05

The present invention provides isolated gene sequences involved in xylose fermentation and related recombinant yeast which are useful in methods of enhanced biofuel production, particularly ethanol production. Methods of bioengineering recombinant yeast useful for biofuel production are also provided.

Polarization in heavy quark decays

Energy Technology Data Exchange (ETDEWEB)

Alimujiang, K.

2006-07-01

In this thesis I concentrate on the angular correlations in top quark decays and their next.to.leading order (NLO) QCD corrections. I also discuss the leading.order (LO) angular correlations in unpolarized and polarized hyperon decays. In the first part of the thesis I calculate the angular correlation between the top quark spin and the momentum of decay products in the rest frame decay of a polarized top quark into a charged Higgs boson and a bottom quark in Two-Higgs-Doublet-Models: t({up_arrow}) {yields} b + H{sup +}. I provide closed form formulae for the O({alpha}{sub s}) radiative corrections to the unpolarized and the polar correlation functions for m{sub b}{ne}0 and m{sub b}=0. In the second part I concentrate on the semileptonic rest frame decay of a polarized top quark into a bottom quark and a lepton pair: t({up_arrow}){yields}X{sub b}+l{sup +}+{nu}{sub l}. I present closed form expressions for the O({alpha}{sub s}) radiative corrections to the unpolarized part and the polar and azimuthal correlations for m{sub b}{ne}0 and m{sub b}=0. In the last part I turn to the angular distribution in semileptonic hyperon decays. Using the helicity method I derive complete formulas for the leading order joint angular decay distributions occurring in semileptonic hyperon decays including lepton mass and polarization effects. (orig.)

Polarization of the sigma minus hyperon produced by a polarized neutral particle beam

International Nuclear Information System (INIS)

Nguyen, A.N.

1992-01-01

A spin transfer technique has been tried in an attempt to produce a beam of polarized hyperons. The method makes use of a two-stage targeting scheme where unpolarized protons from Fermilab's Tevatron incident on target number one (Cu) at production angles of ±2.0 mrad would produce a beam of particles containing polarized Λs and Ξs as well as neutrons and Ks. This secondary beam would then be swept magnetically to retain only neutral particles and brought to bear on target number two (Cu) at 0.0 mrad, producing a tertiary beam of hyperons. The polarization of some 1.3 millions reconstructed Σ - → nπ - events in this tertiary beam (the Σ - having been produced in the inclusive reaction neutrals + Cu → Σ - + X) has been measured at average Σ - momenta 320 GeV/c (1.14 millions events) and 410 GeV/c (135,000 events) and found to be |P| = 3.9 ± 3.2 ± 1.8% and |P| = 13.9 ± 8.1 ± 2.0% respectively, where the first uncertainty is statistical and the second systematic. These polarizations are small and consistent with zero, and preclude a meaningful measurement of the Σ - magnetic moment by the spin precession method. The sign of the polarizations at the target is ambiguous, giving rise to two possible different solutions for the magnetic moment-one of two possible different solutions for the magnetic moment-one of which distinctly disagrees with the world average value for the moment. However, this solution fits the data slightly better than the other. This inconsistency would not exist if the polarization is, in fact, zero

Identification of the arabidopsis RAM/MOR signalling network: adding new regulatory players in plant stem cell maintenance and cell polarization

Science.gov (United States)

Zermiani, Monica; Begheldo, Maura; Nonis, Alessandro; Palme, Klaus; Mizzi, Luca; Morandini, Piero; Nonis, Alberto; Ruperti, Benedetto

2015-01-01

Background and Aims The RAM/MOR signalling network of eukaryotes is a conserved regulatory module involved in co-ordination of stem cell maintenance, cell differentiation and polarity establishment. To date, no such signalling network has been identified in plants. Methods Genes encoding the bona fide core components of the RAM/MOR pathway were identified in Arabidopsis thaliana (arabidopsis) by sequence similarity searches conducted with the known components from other species. The transcriptional network(s) of the arabidopsis RAM/MOR signalling pathway were identified by running in-depth in silico analyses for genes co-regulated with the core components. In situ hybridization was used to confirm tissue-specific expression of selected RAM/MOR genes. Key Results Co-expression data suggested that the arabidopsis RAM/MOR pathway may include genes involved in floral transition, by co-operating with chromatin remodelling and mRNA processing/post-transcriptional gene silencing factors, and genes involved in the regulation of pollen tube polar growth. The RAM/MOR pathway may act upstream of the ROP1 machinery, affecting pollen tube polar growth, based on the co-expression of its components with ROP-GEFs. In silico tissue-specific co-expression data and in situ hybridization experiments suggest that different components of the arabidopsis RAM/MOR are expressed in the shoot apical meristem and inflorescence meristem and may be involved in the fine-tuning of stem cell maintenance and cell differentiation. Conclusions The arabidopsis RAM/MOR pathway may be part of the signalling cascade that converges in pollen tube polarized growth and in fine-tuning stem cell maintenance, differentiation and organ polarity. PMID:26078466

Improvement of heterologous protein production in Aspergillus oryzae by RNA interference with alpha-amylase genes.

Science.gov (United States)

Nemoto, Takashi; Maruyama, Jun-ichi; Kitamoto, Katsuhiko

2009-11-01

Aspergillus oryzae RIB40 has three alpha-amylase genes (amyA, amyB, and amyC), and secretes alpha-amylase abundantly. However, large amounts of endogenous secretory proteins such as alpha-amylase can compete with heterologous protein in the secretory pathway and decrease its production yields. In this study, we examined the effects of suppression of alpha-amylase on heterologous protein production in A. oryzae, using the bovine chymosin (CHY) as a reporter heterologous protein. The three alpha-amylase genes in A. oryzae have nearly identical DNA sequences from those promoters to the coding regions. Hence we performed silencing of alpha-amylase genes by RNA interference (RNAi) in the A. oryzae CHY producing strain. The silenced strains exhibited a reduction in alpha-amylase activity and an increase in CHY production in the culture medium. This result suggests that suppression of alpha-amylase is effective in heterologous protein production in A. oryzae.

Optically pumped polarized 23Na vapor target for use in polarized ion source. Technical progress report

International Nuclear Information System (INIS)

Anderson, L.W.

1984-01-01

We are currently measuring relaxation times in an optically pumped 23 Na vapor target. Our research is directed toward improvements in the optically pumped Na vapor targets used for the production of polarized H - ions. In this progress report we review the properties of the optically pumped polarized H - ion source and especially the optically pumped Na vapor target employed in this source as well as discussing the progress of our research on relaxation times in an optically pumped Na vapor target. 30 references, 6 figures, 3 tables

An efficient source of continuous variable polarization entanglement

DEFF Research Database (Denmark)

Dong, R.; Heersink, J.; Yoshikawa, J.-I.

2007-01-01

classical excitation in Ŝ3. Polarization entanglement was generated by interfering two independent polarization squeezed fields on a symmetric beam splitter. The resultant beams exhibit strong quantum noise correlations in the dark Ŝ1-Ŝ2 polarization plane. To verify entanglement generation, we......We have experimentally demonstrated the efficient creation of highly entangled bipartite continuous variable polarization states. Exploiting an optimized scheme for the production of squeezing using the Kerr non-linearity of a glass fibre we generated polarization squeezed pulses with a mean...... was found to depend critically on the beam-splitting ratio of the entangling beam splitter. Carrying out measurements on a different set of conjugate Stokes parameters, correlations of -3.6 ±0.3 and -3.4 ±0.3 dB have been observed. This result is more robust against asymmetries in the entangling beam...

Preparing for Operational Use of High Priority Products from the Joint Polar Satellite System (JPSS) in Numerical Weather Prediction

Science.gov (United States)

Nandi, S.; Layns, A. L.; Goldberg, M.; Gambacorta, A.; Ling, Y.; Collard, A.; Grumbine, R. W.; Sapper, J.; Ignatov, A.; Yoe, J. G.

2017-12-01

This work describes end to end operational implementation of high priority products from National Oceanic and Atmospheric Administration's (NOAA) operational polar-orbiting satellite constellation, to include Suomi National Polar-orbiting Partnership (S-NPP) and the Joint Polar Satellite System series initial satellite (JPSS-1), into numerical weather prediction and earth systems models. Development and evaluation needed for the initial implementations of VIIRS Environmental Data Records (EDR) for Sea Surface Temperature ingestion in the Real-Time Global Sea Surface Temperature Analysis (RTG) and Polar Winds assimilated in the National Weather Service (NWS) Global Forecast System (GFS) is presented. These implementations ensure continuity of data in these models in the event of loss of legacy sensor data. Also discussed is accelerated operational implementation of Advanced Technology Microwave Sounder (ATMS) Temperature Data Records (TDR) and Cross-track Infrared Sounder (CrIS) Sensor Data Records, identified as Key Performance Parameters by the National Weather Service. Operational use of SNPP after 28 October, 2011 launch took more than one year due to the learning curve and development needed for full exploitation of new remote sensing capabilities. Today, ATMS and CrIS data positively impact weather forecast accuracy. For NOAA's JPSS initial satellite (JPSS-1), scheduled for launch in late 2017, we identify scope and timelines for pre-launch and post-launch activities needed to efficiently transition these capabilities into operations. As part of these alignment efforts, operational readiness for KPPs will be possible as soon as 90 days after launch. The schedule acceleration is possible because of the experience with S-NPP. NOAA operational polar-orbiting satellite constellation provides continuity and enhancement of earth systems observations out to 2036. Program best practices and lessons learned will inform future implementation for follow-on JPSS-3 and -4

Polar Polygons

Science.gov (United States)

2005-01-01

18 August 2005 This Mars Global Surveyor (MGS) Mars Orbiter Camera (MOC) image shows dark-outlined polygons on a frost-covered surface in the south polar region of Mars. In summer, this surface would not be bright and the polygons would not have dark outlines--these are a product of the presence of seasonal frost. Location near: 77.2oS, 204.8oW Image width: width: 3 km (1.9 mi) Illumination from: upper left Season: Southern Spring

Excision of foreign gene product with cathepsin D in chicken hepatoma cell line

International Nuclear Information System (INIS)

Sato, Masaharu; Kawashima, Tsuyoshi; Aosasa, Masayoshi; Horiuchi, Hiroyuki; Furusawa, Shuichi; Matsuda, Haruo

2005-01-01

To easily and rapidly recover exogenous gene products from chicken egg yolk, we constructed pVTG-catD (VTG, vitellogenin; catD, cathepsin D), a vector cassette carrying two catD-recognition signal peptides (catD-RSPs) in addition to the cloning site. An enhanced green fluorescence protein (EGFP)-encoding DNA fragment was ligated into the pVTG-catD. When the resultant construct pVTG-EGFP-catD containing histidine- and myc-tags was transfected into the chicken hepatoma cell line LMH, EGFP-expression at 24 h post-cultivation was confirmed by fluorescence microscopy. Because a signal peptide (NTVLAEF) encoded in pVTG-EGFP-catD is recognized by catD, the VTG-EGFP fusion protein digested with catD was detectable by Western blotting. Digested exogenous gene product was recovered with nickel resin. These results indicate that catD-recognition sites bearing pVTG-catD and His-tags are functional in chicken LMH cells. Therefore, the system described here may be of use in making excision exogenous gene products in the chicken and in creating homozygous knock-in chickens

The role and production of polar/subtropical jet superpositions in two high-impact weather events over North America

Science.gov (United States)

Winters, Andrew C.

Careful observational work has demonstrated that the tropopause is typically characterized by a three-step pole-to-equator structure, with each break between steps in the tropopause height associated with a jet stream. While the two jet streams, the polar and subtropical jets, typically occupy different latitude bands, their separation can occasionally vanish, resulting in a vertical superposition of the two jets. A cursory examination of a number of historical and recent high-impact weather events over North America and the North Atlantic indicates that superposed jets can be an important component of their evolution. Consequently, this dissertation examines two recent jet superposition cases, the 18--20 December 2009 Mid-Atlantic Blizzard and the 1--3 May 2010 Nashville Flood, in an effort (1) to determine the specific influence that a superposed jet can have on the development of a high-impact weather event and (2) to illuminate the processes that facilitated the production of a superposition in each case. An examination of these cases from a basic-state variable and PV inversion perspective demonstrates that elements of both the remote and local synoptic environment are important to consider while diagnosing the development of a jet superposition. Specifically, the process of jet superposition begins with the remote production of a cyclonic (anticyclonic) tropopause disturbance at high (low) latitudes. The cyclonic circulation typically originates at polar latitudes, while organized tropical convection can encourage the development of an anticyclonic circulation anomaly within the tropical upper-troposphere. The concurrent advection of both anomalies towards middle latitudes subsequently allows their individual circulations to laterally displace the location of the individual tropopause breaks. Once the two circulation anomalies position the polar and subtropical tropopause breaks in close proximity to one another, elements within the local environment, such as

Polarization-dependent pump-probe studies in atomic fine-structure levels: towards the production of spin-polarized electrons

International Nuclear Information System (INIS)

Sokell, E.; Zamith, S.; Bouchene, M.A.; Girard, B.

2000-01-01

The precession of orbital and spin angular momentum vectors has been observed in a pump-probe study of the 4P fine-structure states of atomic potassium. A femtosecond pump pulse prepared a coherent superposition of the two fine-structure components. A time-delayed probe pulse then ionized the system after it had been allowed to evolve freely. Oscillations recorded in the ion signal reflect the evolution of the orientation of the orbital and spin angular momentum due to spin-orbit coupling. This interpretation gives physical insight into the cause of the half-period phase shift observed when the relative polarizations of the laser pulses were changed from parallel to perpendicular. Finally, it is shown that these changes in the orientation of the spin momentum vector of the system can be utilized to produce highly spin-polarized free electrons on the femtosecond scale. (author)

Associations between variants of the HAL gene and milk production traits in Chinese Holstein cows.

Science.gov (United States)

Wang, Haifei; Jiang, Li; Wang, Wenwen; Zhang, Shengli; Yin, Zongjun; Zhang, Qin; Liu, Jian-Feng

2014-11-25

The histidine ammonia-lyse gene (HAL) encodes the histidine ammonia-lyase, which catalyzes the first reaction of histidine catabolism. In our previous genome-wide association study in Chinese Holstein cows to identify genetic variants affecting milk production traits, a SNP (rs41647754) located 357 bp upstream of HAL, was found to be significantly associated with milk yield and milk protein yield. In addition, the HAL gene resides within the reported QTLs for milk production traits. The aims of this study were to identify genetic variants in HAL and to test the association between these variants and milk production traits. Fifteen SNPs were identified within the regions under study of the HAL gene, including three coding mutations, seven intronic mutations, one promoter region mutation, and four 3'UTR mutations. Nine of these identified SNPs were chosen for subsequent genotyping and association analyses. Our results showed that five SNP markers (ss974768522, ss974768525, ss974768531, ss974768533 and ss974768534) were significantly associated with one or more milk production traits. Haplotype analysis showed that two haplotype blocks were significantly associated with milk yield and milk protein yield, providing additional support for the association between HAL variants and milk production traits in dairy cows (P HAL gene and milk production traits in Chinese Holstein cows, indicating the potential role of HAL variants in these traits. These identified SNPs may serve as genetic markers used in genomic selection schemes to accelerate the genetic gains of milk production traits in dairy cattle.

Fragmentation functions of polarized heavy quarkonium

International Nuclear Information System (INIS)

Ma, Yan-Qing; Qiu, Jian-Wei; Zhang, Hong

2015-01-01

Investigating the production of polarized heavy quarkonia in terms of recently proposed QCD factorization formalism requires the knowledge of a large number of input fragmentation functions (FFs) from a single parton or a heavy quark-antiquark pair to a polarized heavy quarkonium. We study these universal FFs at the input factorization scale μ 0 ≳2m Q , with heavy quark mass m Q , in the framework of nonrelativistic QCD (NRQCD) factorization. We express these FFs in terms of perturbatively calculable coefficients for producing a heavy quark-antiquark pair in all possible NRQCD states, multiplied by corresponding NRQCD long-distance matrix elements for the pair to transmute into a polarized heavy quarkonium. We derive all relevant NRQCD operators for the long-distance matrix elements based on symmetries, and introduce a self-consistent scheme to define them in arbitrary d-dimensions. We compute, up to the first non-trivial order in α s , the perturbative coefficients for producing a heavy quark pair in all possible S-wave and P-wave NRQCD states. We also discuss the role of the polarized FFs in generating QCD predictions for the polarization of J/ψ produced at collider energies.

History of the polarized beam

International Nuclear Information System (INIS)

Parker, E.F.

1979-01-01

In 1973, the first high energy polarized proton beam was developed at the Argonne Zero Gradient Synchrotron (ZGS). It operated very successfully and productively until 1979 when the ZGS was shut down permanently. This report describes the development, characteristics, and operations of this facility

Characterization, expression profiles, intracellular distribution and association analysis of porcine PNAS-4 gene with production traits

Directory of Open Access Journals (Sweden)

Wang Heng

2008-06-01

Full Text Available Abstract Background In a previous screen to identify differentially expressed genes associated with embryonic development, the porcine PNAS-4 gene had been found. Considering differentially expressed genes in early stages of muscle development are potential candidate genes to improve meat quality and production efficiency, we determined how porcine PNAS-4 gene regulates meat production. Therefore, this gene has been sequenced, expression analyzed and associated with meat production traits. Results We cloned the full-length cDNA of porcine PNAS-4 gene encoding a protein of 194 amino acids which was expressed in the Golgi complex. This gene was mapped to chromosome 10, q11–16, in a region of conserved synteny with human chromosome 1 where the human homologous gene was localized. Real-time PCR revealed that PNAS-4 mRNA was widely expressed with highest expression levels in skeletal muscle followed by lymph, liver and other tissues, and showed a down-regulated expression pattern during prenatal development while a up-regulated expression pattern after weaning. Association analysis revealed that allele C of SNP A1813C was prevalent in Chinese indigenous breeds whereas A was dominant allele in Landrace and Large White, and the pigs with homozygous CC had a higher fat content than those of the pigs with other genotypes (P Conclusion Porcine PNAS-4 protein tagged with green fluorescent protein accumulated in the Golgi complex, and its mRNA showed a widespread expression across many tissues and organs in pigs. It may be an important factor affecting the meat production efficiency, because its down-regulated expression pattern during early embryogenesis suggests involvement in increase of muscle fiber number. In addition, the SNP A1813C associated with fat traits might be a genetic marker for molecular-assisted selection in animal breeding.

Ultra-trace-level determination of polar pesticides and their transformation products in surface and estuarine water samples using column liquid chromatography electrospray-tandem mass spectrometry

NARCIS (Netherlands)

Steen, R.J.C.A.; Hogenboom, A.C.; Leonards, P.E.G.; Peerboom, R.A.L.; Cofino, W.P.; Brinkman, U.A.T.

1999-01-01

A method is developed for the determination of polar pesticides and their transformation products [atrazine, deethylatrazine, deisopropylatrazine, hydroxyatrazine, diuron, 3,4-dichlorophenylmethylurea, 3,4-dichlorophenylurea (DPU), monuron, bentazone, anthranil-isopropylamide, chloridazon,

Production of Molecular Iodine and Tri-iodide in the Frozen Solution of Iodide: Implication for Polar Atmosphere.

Science.gov (United States)

Kim, Kitae; Yabushita, Akihiro; Okumura, Masanori; Saiz-Lopez, Alfonso; Cuevas, Carlos A; Blaszczak-Boxe, Christopher S; Min, Dae Wi; Yoon, Ho-Il; Choi, Wonyong

2016-02-02

The chemistry of reactive halogens in the polar atmosphere plays important roles in ozone and mercury depletion events, oxidizing capacity, and dimethylsulfide oxidation to form cloud-condensation nuclei. Among halogen species, the sources and emission mechanisms of inorganic iodine compounds in the polar boundary layer remain unknown. Here, we demonstrate that the production of tri-iodide (I3(-)) via iodide oxidation, which is negligible in aqueous solution, is significantly accelerated in frozen solution, both in the presence and the absence of solar irradiation. Field experiments carried out in the Antarctic region (King George Island, 62°13'S, 58°47'W) also showed that the generation of tri-iodide via solar photo-oxidation was enhanced when iodide was added to various ice media. The emission of gaseous I2 from the irradiated frozen solution of iodide to the gas phase was detected by using cavity ring-down spectroscopy, which was observed both in the frozen state at 253 K and after thawing the ice at 298 K. The accelerated (photo-)oxidation of iodide and the subsequent formation of tri-iodide and I2 in ice appear to be related with the freeze concentration of iodide and dissolved O2 trapped in the ice crystal grain boundaries. We propose that an accelerated abiotic transformation of iodide to gaseous I2 in ice media provides a previously unrecognized formation pathway of active iodine species in the polar atmosphere.

Report of the polarization group

International Nuclear Information System (INIS)

Ford, W.; Kondo, K.; Martin, F.; Manning, G.; Miller, D.; Prescott, C.

1975-01-01

The use of longitudinal polarization in the reaction e + e - → μ + μ - was studied. Modifications of the magnetic insertion which could reduce synchrotron radiation by two or more were considered. In addition, a specific design is suggested which incorporates the optimized magnetic configuration; it is assumed that no particle detection is necessary near the interaction vertex and the synchrotron radiation is ''dumped'' up - and downstream. Also considered were vacuum chambers in which the synchrotron radiation is absorbed locally so that shielded regions are provided for detectors near the interaction vertex. A scheme for rotating the polarization outside the experiment areas is detailed; in this way the design of experiments is greatly simplified. Local intense ionization of residual gas in the interaction region due to synchrotron radiation at the insertion was studied. Finally, some general considerations in the production and measurement of beam polarization are summarized. 2 figures

Workshop on polarized neutron filters and polarized pulsed neutron experiments

International Nuclear Information System (INIS)

Itoh, Shinichi

2004-07-01

The workshop was held in KEK by thirty-three participants on April 26, 2004. The polarized neutron filter method was only discussed. It consists of three parts; the first part was discussed on the polarized neutron methods, the second part on the polarized neutron experiments and the third on the pulse neutron spectrometer and polarized neutron experiments. The six papers were presented such as the polarized 3 He neutron spin filter, neutron polarization by proton polarized filter, soft master and neutron scattering, polarized neutron in solid physics, polarization experiments by chopper spectroscope and neutron polarization system in superHRPD. (S.Y.)

Accessing the distribution of linearly polarized gluons in unpolarized hadrons

NARCIS (Netherlands)

Boer, Daniël; Brodsky, Stanley J.; Mulders, Piet J.; Pisano, Cristian

2011-01-01

Gluons inside unpolarized hadrons can be linearly polarized provided they have a nonzero transverse momentum. The simplest and theoretically safest way to probe this distribution of linearly polarized gluons is through cos(2 phi) asymmetries in heavy quark pair or dijet production in electron-hadron

Impact of nitrogen concentration on validamycin A production and related gene transcription in fermentation of Streptomyces hygroscopicus 5008.

Science.gov (United States)

Wei, Zhen-Hua; Bai, Linquan; Deng, Zixin; Zhong, Jian-Jiang

2012-09-01

Validamycin A (VAL-A) is an important and widely used agricultural antibiotic. In this study, statistical screening designs were applied to identify significant medium variables for VAL-A production and to find their optimal levels. The optimized medium caused 70% enhancement of VAL-A production. The difference between optimized medium and original medium suggested that low nitrogen source level might attribute to the enhancement of VAL-A production. The addition of different nitrogen sources to the optimized medium inhibited VAL-A production, which confirmed the importance of nitrogen concentration for VAL-A production. Furthermore, differences in structural gene transcription and enzyme activity between the two media were assayed. The results showed that lower nitrogen level in the optimized medium could regulate VAL-A production in gene transcriptional level. Our previous study indicated that the transcription of VAL-A structural genes could be enhanced at elevated temperature. In this work, the increased fermentation temperature from 37 to 42 °C with the optimized medium enhanced VAL-A production by 39%, which testified to the importance of structural gene transcription in VAL-A production. The information is useful for further VAL-A production enhancement.

Probing the Spin Structure of the Proton Using Polarized Proton-Proton Collisions and the Production of W Bosons

Energy Technology Data Exchange (ETDEWEB)

Beaumier, Michael J. [Univ. of California, Riverside, CA (United States)

2016-08-01

This thesis discusses the process of extracting the longitudinal asymmetry, A$W±\\atop{L}$ describing W → μ production in forward kinematic regimes. This asymmetry is used to constrain our understanding of the polarized parton distribution functions characterizing $\\bar{u}$ and $\\bar{d}$ sea quarks in the proton. This asymmetry will be used to constrain the overall contribution of the sea-quarks to the total proton spin. The asymmetry is evaluated over the pseudorapidity range of the PHENIX Muon Arms, 2.1 < |η| 2.6, for longitudinally polarized proton-proton collisions at 510 GeV √s. In particular, I will discuss the statistical methods used to characterize real muonic W decays and the various background processes is presented, including a discussion of likelihood event selection and the Extended Unbinned Maximum Likelihood t. These statistical methods serve estimate the yields of W muonic decays, which are used to calculate the longitudinal asymmetry.

Prospects of polarized fixed target Drell-Yan experiments

International Nuclear Information System (INIS)

Liu, M X; Jiang, X; Crabb, D G; Chen, J P; Bai, M

2011-01-01

It has been proposed that the Siverse transverse single spin asymmetry in Drell-Yan production in transversely polarized p+p collisions would have an opposite sign compared to what has been observed in the polarized Semi-Inclusive Deep Inelastic Scattering (SIDIS) experiments. Experimental confirmation or disproval of this prediction would provide a novel fundamental test of QCD and shed new light on our theoretical understanding of the transverse spin physics phenomena. We discuss the prospects and physics sensitivities of polarized fixed target Drell-Yan experiments that could utilize the existing proton and other hadron beams at Fermilab, and polarized proton beams at RHIC with a polarized solid proton and/or neutron target option. We show that if realized, the new experiments would provide critical measurements of not only the sign change (or not) of Sivers functions, but also the information of quark and antiquark's Sivers distributions over a wide kinematic range.

Dairy Product Consumption Interacts with Glucokinase (GCK Gene Polymorphisms Associated with Insulin Resistance

Directory of Open Access Journals (Sweden)

Marine S. Da Silva

2017-08-01

Full Text Available Dairy product intake and a person’s genetic background have been reported to be associated with the risk of type 2 diabetes (T2D. The objective of this study was to examine the interaction between dairy products and genes related to T2D on glucose-insulin homeostasis parameters. A validated food frequency questionnaire, fasting blood samples, and glucokinase (GCK genotypes were analyzed in 210 healthy participants. An interaction between rs1799884 in GCK and dairy intake on the homeostasis model assessment of insulin resistance was identified. Secondly, human hepatocellular carcinoma cells (HepG2 were grown in a high-glucose medium and incubated with either 1-dairy proteins: whey, caseins, and a mixture of whey and casein; and 2-four amino acids (AA or mixtures of AA. The expression of GCK-related genes insulin receptor substrate-1 (IRS-1 and fatty acid synthase (FASN was increased with whey protein isolate or hydrolysate. Individually, leucine increased IRS-1 expression, whereas isoleucine and valine decreased FASN expression. A branched-chain AA mixture decreased IRS-1 and FASN expression. In conclusion, carriers of the A allele for rs1799884 in the GCK gene may benefit from a higher intake of dairy products to maintain optimal insulin sensitivity. Moreover, the results show that whey proteins affect the expression of genes related to glucose metabolism.

Collective effects in spin polarized plasmas

International Nuclear Information System (INIS)

Coppi, B.; Cowley, S.; Detragiache, P.; Kulsrud, R.; Pegoraro, F.

1984-10-01

A fusing plasma with coherently polarized spin nuclei can be subject to instabilities due to the anisotropy of the reaction product distributions in velocity space, which is a result of their polarization. The characteristics of these instabilities depend strongly on the plasma spatial inhomogeneities and a significant rate of spin depolarization can be produced by them if adequate fluctuation amplitudes are reached. The results of the relevant analysis are, in addition, of interest for plasma heating processes with frequencies in the range of the cyclotron frequencies of the considered nuclei

Muon polarization in the MEG experiment: predictions and measurements

International Nuclear Information System (INIS)

Baldini, A.M.; Dussoni, S.; Galli, L.; Grassi, M.; Sergiampietri, F.; Signorelli, G.; Bao, Y.; Hildebrandt, M.; Kettle, P.R.; Mtchedlishvili, A.; Papa, A.; Ritt, S.; Baracchini, E.; Bemporad, C.; Cei, F.; D'Onofrio, A.; Nicolo, D.; Tenchini, F.; Berg, F.; Hodge, Z.; Rutar, G.; Biasotti, M.; Gatti, F.; Pizzigoni, G.; Boca, G.; De Bari, A.; Cattaneo, P.W.; Rossella, M.; Cavoto, G.; Piredda, G.; Renga, F.; Voena, C.; Chiarello, G.; Panareo, M.; Pepino, A.; Chiri, C.; Grancagnolo, F.; Tassielli, G.F.; De Gerone, M.; Fujii, Y.; Iwamoto, T.; Kaneko, D.; Mori, Toshinori; Nakaura, S.; Nishimura, M.; Ogawa, S.; Ootani, W.; Sawada, R.; Uchiyama, Y.; Yoshida, K.; Graziosi, A.; Ripiccini, E.; Grigoriev, D.N.; Haruyama, T.; Mihara, S.; Nishiguchi, H.; Yamamoto, A.; Ieki, K.; Ignatov, F.; Khazin, B.I.; Popov, A.; Yudin, Yu.V.; Kang, T.I.; Lim, G.M.A.; Molzon, W.; You, Z.; Khomutov, N.; Korenchenko, A.; Kravchuk, N.; Venturini, M.

2016-01-01

The MEG experiment makes use of one of the world's most intense low energy muon beams, in order to search for the lepton flavour violating process μ + → e + γ. We determined the residual beam polarization at the thin stopping target, by measuring the asymmetry of the angular distribution of Michel decay positrons as a function of energy. The initial muon beam polarization at the production is predicted to be P μ = -1 by the Standard Model (SM) with massless neutrinos. We estimated our residual muon polarization to be P μ =.0.86 ± 0.02 (stat) -0.06 +0.05 (syst) at the stopping target, which is consistent with the SM predictions when the depolarizing effects occurring during the muon production, propagation and moderation in the target are taken into account. The knowledge of beam polarization is of fundamental importance in order to model the background of our μ + → e + γ search induced by the muon radiative decay: μ + → e + anti ν μ ν e γ. (orig.)

Neutron polarization in polarized 3He targets

International Nuclear Information System (INIS)

Friar, J.L.; Gibson, B.F.; Payne, G.L.; Bernstein, A.M.; Chupp, T.E.

1990-01-01

Simple formulas for the neutron and proton polarizations in polarized 3 He targets are derived assuming (1) quasielastic final states; (2) no final-state interactions; (3) no meson-exchange currents; (4) large momentum transfers; (5) factorizability of 3 He SU(4) response-function components. Numerical results from a wide variety of bound-state solutions of the Faddeev equations are presented. It is found that this simple model predicts the polarization of neutrons in a fully polarized 3 He target to be 87%, while protons should have a slight residual polarization of -2.7%. Numerical studies show that this model works very well for quasielastic electron scattering

Experimental techniques and physics in a polarized storage ring

International Nuclear Information System (INIS)

Dueren, M.

1995-01-01

In May 1994 spin rotators were brought into operation at HERA and for the first time longitudinal electron polarization was produced in a high energy storage ring. A Compton polarimeter is used for empirical optimization of the polarization to values of up to 70%. HERMES makes use of the stored polarized beam with an internal polarized target. The density of a gas target is increased by a storage cell by two orders of magnitude compared to a free gas jet. Data taking begins in 1995 with measurements on polarized spin structure functions and also on semi-inclusive polarized hadron production. The inclusive physics program is in competition with experiments at CERN and SLAC. The semi-inclusive physics program promises to solve basic questions of the spin structure of matter by decomposing the spin contributions of the different quark flavors. (author) 24 figs., 3 tabs., 44 refs

Perspectives for polarized antiprotons

International Nuclear Information System (INIS)

Lenisa, Paolo

2012-01-01

Polarized antiprotons would open a new window in hadron physics providing access to a wealth of single and double spin observables in proton-antiproton interactions. The PAX Collaboration aims to perform the first ever measurement of the spin-dependence of the proton-antiproton cross section at the AD ring at CERN. The spin-dependence of the cross section could in principle be exploited by the spin-filtering technique for the production of a polarized antiproton beam. As a preparatory phase to the experimentation at AD, the PAX Collaboration has initiated a series of dedicated studies with protons at the COSY-ring in Juelich (Germany), aimed at the commissioning of the experimental apparatus and confirmation of the predictions for spin-filtering with protons.

Development in LIYaF of the method of polarized thermal neutron beam production by mirror reflection

International Nuclear Information System (INIS)

Borovikova, N.V.; Bulkin, A.P.; Gukasov, A.G.

1980-01-01

Main stages of development of polarizing neutron guide equipment in LIYaF of the USSR Academy of Sciences are described. To carry out experiments on solid-state physics constructed was a working mock-up of a polarizing neutron guide having 1570 mm length of a mirror channel. Successful application of polarizing mirrors to the working mock-up permitted to develop and fabricate five-meter polarizing neutron guide with output flux equal to 1.5x10 7 neutr/cm 2 xs. The following stage of development of polarizing neutron guides was the construction of four-meter neutron guide at the WWR-M reactor with output flux equal to the highest possible. Improvement of optical sections geometry made it possible to produce integral flux of 6.0x10 7 neutr/cm 2 xs in this neutron guide at 15 MW reactor power. The results obtained testify to prospects of the mirror method for polarization of thermal neutrons of a wave length lambda >= A. Neutron guides-polarizators permit to produce high fluxes of polarized thermal neutrons in the wide interval of wave length [ru

When measured spin polarization is not spin polarization

International Nuclear Information System (INIS)

Dowben, P A; Wu Ning; Binek, Christian

2011-01-01

Spin polarization is an unusually ambiguous scientific idiom and, as such, is rarely well defined. A given experimental methodology may allow one to quantify a spin polarization but only in its particular context. As one might expect, these ambiguities sometimes give rise to inappropriate interpretations when comparing the spin polarizations determined through different methods. The spin polarization of CrO 2 and Cr 2 O 3 illustrate some of the complications which hinders comparisons of spin polarization values. (viewpoint)

Nuclear Dependence of the Transverse-Single-Spin Asymmetry for Forward Neutron Production in Polarized p +A Collisions at √{sN N}=200 GeV

Science.gov (United States)

Aidala, C.; Akiba, Y.; Alfred, M.; Andrieux, V.; Aoki, K.; Apadula, N.; Asano, H.; Ayuso, C.; Azmoun, B.; Babintsev, V.; Bagoly, A.; Bandara, N. S.; Barish, K. N.; Bathe, S.; Bazilevsky, A.; Beaumier, M.; Belmont, R.; Berdnikov, A.; Berdnikov, Y.; Blau, D. S.; Boer, M.; Bok, J. S.; Brooks, M. L.; Bryslawskyj, J.; Bumazhnov, V.; Butler, C.; Campbell, S.; Canoa Roman, V.; Cervantes, R.; Chi, C. Y.; Chiu, M.; Choi, I. J.; Choi, J. B.; Citron, Z.; Connors, M.; Cronin, N.; Csanád, M.; Csörgő, T.; Danley, T. W.; Daugherity, M. S.; David, G.; Deblasio, K.; Dehmelt, K.; Denisov, A.; Deshpande, A.; Desmond, E. J.; Dion, A.; Dixit, D.; Do, J. H.; Drees, A.; Drees, K. A.; Dumancic, M.; Durham, J. M.; Durum, A.; Elder, T.; Enokizono, A.; En'yo, H.; Esumi, S.; Fadem, B.; Fan, W.; Feege, N.; Fields, D. E.; Finger, M.; Finger, M.; Fokin, S. L.; Frantz, J. E.; Franz, A.; Frawley, A. D.; Fukuda, Y.; Gal, C.; Gallus, P.; Garg, P.; Ge, H.; Giordano, F.; Goto, Y.; Grau, N.; Greene, S. V.; Grosse Perdekamp, M.; Gunji, T.; Guragain, H.; Hachiya, T.; Haggerty, J. S.; Hahn, K. I.; Hamagaki, H.; Hamilton, H. F.; Han, S. Y.; Hanks, J.; Hasegawa, S.; Haseler, T. O. S.; He, X.; Hemmick, T. K.; Hill, J. C.; Hill, K.; Hollis, R. S.; Homma, K.; Hong, B.; Hoshino, T.; Hotvedt, N.; Huang, J.; Huang, S.; Imai, K.; Imrek, J.; Inaba, M.; Iordanova, A.; Isenhower, D.; Ito, Y.; Ivanishchev, D.; Jacak, B. V.; Jezghani, M.; Ji, Z.; Jiang, X.; Johnson, B. M.; Jorjadze, V.; Jouan, D.; Jumper, D. S.; Kang, J. H.; Kapukchyan, D.; Karthas, S.; Kawall, D.; Kazantsev, A. V.; Khachatryan, V.; Khanzadeev, A.; Kim, C.; Kim, D. J.; Kim, E.-J.; Kim, M.; Kim, M. H.; Kincses, D.; Kistenev, E.; Klatsky, J.; Kline, P.; Koblesky, T.; Kotov, D.; Kudo, S.; Kurita, K.; Kwon, Y.; Lajoie, J. G.; Lallow, E. O.; Lebedev, A.; Lee, S.; Leitch, M. J.; Leung, Y. H.; Lewis, N. A.; Li, X.; Lim, S. H.; Liu, L. D.; Liu, M. X.; Loggins, V.-R.; Lökös, S.; Lovasz, K.; Lynch, D.; Majoros, T.; Makdisi, Y. I.; Makek, M.; Malaev, M.; Manko, V. I.; Mannel, E.; Masuda, H.; McCumber, M.; McGaughey, P. L.; McGlinchey, D.; McKinney, C.; Mendoza, M.; Metzger, W. J.; Mignerey, A. C.; Mihalik, D. E.; Milov, A.; Mishra, D. K.; Mitchell, J. T.; Mitsuka, G.; Miyasaka, S.; Mizuno, S.; Montuenga, P.; Moon, T.; Morrison, D. P.; Morrow, S. I. M.; Murakami, T.; Murata, J.; Nagai, K.; Nagashima, K.; Nagashima, T.; Nagle, J. L.; Nagy, M. I.; Nakagawa, I.; Nakagomi, H.; Nakano, K.; Nattrass, C.; Niida, T.; Nouicer, R.; Novák, T.; Novitzky, N.; Novotny, R.; Nyanin, A. S.; O'Brien, E.; Ogilvie, C. A.; Orjuela Koop, J. D.; Osborn, J. D.; Oskarsson, A.; Ottino, G. J.; Ozawa, K.; Pantuev, V.; Papavassiliou, V.; Park, J. S.; Park, S.; Pate, S. F.; Patel, M.; Peng, W.; Perepelitsa, D. V.; Perera, G. D. N.; Peressounko, D. Yu.; Perezlara, C. E.; Perry, J.; Petti, R.; Phipps, M.; Pinkenburg, C.; Pisani, R. P.; Pun, A.; Purschke, M. L.; Radzevich, P. V.; Read, K. F.; Reynolds, D.; Riabov, V.; Riabov, Y.; Richford, D.; Rinn, T.; Rolnick, S. D.; Rosati, M.; Rowan, Z.; Runchey, J.; Safonov, A. S.; Sakaguchi, T.; Sako, H.; Samsonov, V.; Sarsour, M.; Sato, K.; Sato, S.; Schaefer, B.; Schmoll, B. K.; Sedgwick, K.; Seidl, R.; Sen, A.; Seto, R.; Sexton, A.; Sharma, D.; Shein, I.; Shibata, T.-A.; Shigaki, K.; Shimomura, M.; Shioya, T.; Shukla, P.; Sickles, A.; Silva, C. L.; Silvermyr, D.; Singh, B. K.; Singh, C. P.; Singh, V.; Skoby, M. J.; Slunečka, M.; Smith, K. L.; Snowball, M.; Soltz, R. A.; Sondheim, W. E.; Sorensen, S. P.; Sourikova, I. V.; Stankus, P. W.; Stoll, S. P.; Sugitate, T.; Sukhanov, A.; Sumita, T.; Sun, J.; Syed, S.; Sziklai, J.; Takeda, A.; Tanida, K.; Tannenbaum, M. J.; Tarafdar, S.; Taranenko, A.; Tarnai, G.; Tieulent, R.; Timilsina, A.; Todoroki, T.; Tomášek, M.; Towell, C. L.; Towell, R. S.; Tserruya, I.; Ueda, Y.; Ujvari, B.; van Hecke, H. W.; Vazquez-Carson, S.; Velkovska, J.; Virius, M.; Vrba, V.; Vukman, N.; Wang, X. R.; Wang, Z.; Watanabe, Y.; Watanabe, Y. S.; Wong, C. P.; Woody, C. L.; Xu, C.; Xu, Q.; Xue, L.; Yalcin, S.; Yamaguchi, Y. L.; Yamamoto, H.; Yanovich, A.; Yin, P.; Yoo, J. H.; Yoon, I.; Yu, H.; Yushmanov, I. E.; Zajc, W. A.; Zelenski, A.; Zharko, S.; Zou, L.; Phenix Collaboration

2018-01-01

During 2015, the Relativistic Heavy Ion Collider (RHIC) provided collisions of transversely polarized protons with Au and Al nuclei for the first time, enabling the exploration of transverse-single-spin asymmetries with heavy nuclei. Large single-spin asymmetries in very forward neutron production have been previously observed in transversely polarized p +p collisions at RHIC, and the existing theoretical framework that was successful in describing the single-spin asymmetry in p +p collisions predicts only a moderate atomic-mass-number (A ) dependence. In contrast, the asymmetries observed at RHIC in p +A collisions showed a surprisingly strong A dependence in inclusive forward neutron production. The observed asymmetry in p +Al collisions is much smaller, while the asymmetry in p +Au collisions is a factor of 3 larger in absolute value and of opposite sign. The interplay of different neutron production mechanisms is discussed as a possible explanation of the observed A dependence.

Improving the Safety of Cell Therapy Products by Suicide Gene Transfer

Directory of Open Access Journals (Sweden)

Antonio eDi Stasi

2014-11-01

Full Text Available Adoptive T-cell therapy can involve donor lymphocyte infusion (DLI after allogeneic hematopoietic stem cell transplantation, the administration of tumor infiltrating lymphocyte (TILs expanded ex-vivo, or more recently the use of T cell receptor (TCR or chimeric antigen receptor (CAR redirected T cells. However cellular therapies can pose significant risks, including graft-versus-host-disease and other on and off-target effects, and therefore strategies need to be implemented to permanently reverse any sign of toxicity. A suicide gene is a genetically encoded molecule that allows selective destruction of adoptively transferred cells. Suicide gene addition to cellular therapeutic products can lead to selective ablation of gene-modified cells, preventing collateral damage to contiguous cells and/or tissues. The ‘ideal’ suicide gene would ensure the safety of gene modified cellular applications by granting irreversible elimination of ‘all’ and ‘only’ the cells responsible for the unwanted toxicity. This review presents the suicide gene safety systems reported to date, with a focus on the state-of-the-art and potential applications regarding two of the most extensively validated suicide genes, including the clinical setting: herpes-simplex-thymidine-kinase (HSV-TK and inducible-caspase-9 (iCasp9.

Simultaneous measurement of forward-backward asymmetry and top polarization in dilepton final states from $t\\bar t$ production at the Tevatron

CERN Document Server

Abazov, Victor Mukhamedovich; Acharya, Bannanje Sripath; Adams, Mark Raymond; Adams, Todd; Agnew, James P; Alexeev, Guennadi D; Alkhazov, Georgiy D; Alton, Andrew K; Askew, Andrew Warren; Atkins, Scott; Augsten, Kamil; Avila, Carlos A; Badaud, Frederique; Bagby, Linda F; Baldin, Boris; Bandurin, Dmitry V; Banerjee, Sunanda; Barberis, Emanuela; Baringer, Philip S; Bartlett, JFrederick; Bassler, Ursula Rita; Bazterra, Victor; Bean, Alice L; Begalli, Marcia; Bellantoni, Leo; Beri, Suman B; Bernardi, Gregorio; Bernhard, Ralf Patrick; Bertram, Iain A; Besancon, Marc; Beuselinck, Raymond; Bhat, Pushpalatha C; Bhatia, Sudeep; Bhatnagar, Vipin; Blazey, Gerald Charles; Blessing, Susan K; Bloom, Kenneth A; Boehnlein, Amber S; Boline, Daniel Dooley; Boos, Edward E; Borissov, Guennadi; Borysova, Maryna; Brandt, Andrew; Brandt, Oleg; Brock, Raymond L; Bross, Alan D; Brown, Duncan Paul; Bu, Xue-Bing; Buehler, Marc; Buescher, Volker; Bunichev, Viacheslav Yevgenyevich; Burdin, Sergey; Buszello, Claus Peter; Camacho-Perez, Enrique; Casey, Brendan Cameron Kieran; Castilla-Valdez, Heriberto; Caughron, Seth Aaron; Chakrabarti, Subhendu; Chan, Kwok Ming Leo; Chandra, Avdhesh; Chapon, Emilien; Chen, Guo; Cho, Sung-Woong; Choi, Suyong; Choudhary, Brajesh C; Cihangir, Selcuk; Claes, Daniel R; Clutter, Justace Randall; Cooke, Michael P; Cooper, William Edward; Corcoran, Marjorie D; Couderc, Fabrice; Cousinou, Marie-Claude; Cuth, Jakub; Cutts, David; Das, Amitabha; Davies, Gavin John; de Jong, Sijbrand Jan; De La Cruz-Burelo, Eduard; Deliot, Frederic; Demina, Regina; Denisov, Dmitri S; Denisov, Sergei P; Desai, Satish Vijay; Deterre, Cecile; DeVaughan, Kayle Otis; Diehl, HThomas; Diesburg, Michael; Ding, Pengfei; Dominguez, DAaron M; Dubey, Abhinav Kumar; Dudko, Lev V; Duperrin, Arnaud; Dutt, Suneel; Eads, Michael T; Edmunds, Daniel L; Ellison, John A; Elvira, VDaniel; Enari, Yuji; Evans, Harold G; Evdokimov, Anatoly V; Evdokimov, Valeri N; Faure, Alexandre; Feng, Lei; Ferbel, Thomas; Fiedler, Frank; Filthaut, Frank; Fisher, Wade Cameron; Fisk, HEugene; Fortner, Michael R; Fox, Harald; Fuess, Stuart C; Garbincius, Peter H; Garcia-Bellido, Aran; Garcia-Gonzalez, Jose Andres; Gavrilov, Vladimir B; Geng, Weigang; Gerber, Cecilia Elena; Gershtein, Yuri S; Ginther, George E; Gogota, Olga; Golovanov, Georgy Anatolievich; Grannis, Paul D; Greder, Sebastien; Greenlee, Herbert B; Grenier, Gerald Jean; Gris, Phillipe Luc; Grivaz, Jean-Francois; Grohsjean, Alexander; Gruenendahl, Stefan; Gruenewald, Martin Werner; Guillemin, Thibault; Gutierrez, Gaston R; Gutierrez, Phillip; Haley, Joseph Glenn Biddle; Han, Liang; Harder, Kristian; Harel, Amnon; Hauptman, John Michael; Hays, Jonathan M; Head, Tim; Hebbeker, Thomas; Hedin, David R; Hegab, Hatim; Heinson, Ann; Heintz, Ulrich; Hensel, Carsten; Heredia-De La Cruz, Ivan; Herner, Kenneth Richard; Hesketh, Gavin G; Hildreth, Michael D; Hirosky, Robert James; Hoang, Trang; Hobbs, John D; Hoeneisen, Bruce; Hogan, Julie; Hohlfeld, Mark; Holzbauer, Jenny Lyn; Howley, Ian James; Hubacek, Zdenek; Hynek, Vlastislav; Iashvili, Ia; Ilchenko, Yuriy; Illingworth, Robert A; Ito, Albert S; Jabeen, Shabnam; Jaffre, Michel J; Jayasinghe, Ayesh; Jeong, Min-Soo; Jesik, Richard L; Jiang, Peng; Johns, Kenneth Arthur; Johnson, Emily; Johnson, Marvin E; Jonckheere, Alan M; Jonsson, Per Martin; Joshi, Jyoti; Jung, Andreas Werner; Juste, Aurelio; Kajfasz, Eric; Karmanov, Dmitriy Y; Katsanos, Ioannis; Kaur, Manbir; Kehoe, Robert Leo Patrick; Kermiche, Smain; Khalatyan, Norayr; Khanov, Alexander; Kharchilava, Avto; Kharzheev, Yuri N; Kiselevich, Ivan Lvovich; Kohli, Jatinder M; Kozelov, Alexander V; Kraus, James Alexander; Kumar, Ashish; Kupco, Alexander; Kurca, Tibor; Kuzmin, Valentin Alexandrovich; Lammers, Sabine Wedam; Lebrun, Patrice; Lee, Hyeon-Seung; Lee, Seh-Wook; Lee, William M; Lei, Xiaowen; Lellouch, Jeremie; Li, Dikai; Li, Hengne; Li, Liang; Li, Qi-Zhong; Lim, Jeong Ku; Lincoln, Donald W; Linnemann, James Thomas; Lipaev, Vladimir V; Lipton, Ronald J; Liu, Huanzhao; Liu, Yanwen; Lobodenko, Alexandre; Lokajicek, Milos; Lopes de Sa, Rafael; Luna-Garcia, Rene; Lyon, Adam Leonard; Maciel, Arthur KA; Madar, Romain; Magana-Villalba, Ricardo; Malik, Sudhir; Malyshev, Vladimir L; Mansour, Jason; Martinez-Ortega, Jorge; McCarthy, Robert L; Mcgivern, Carrie Lynne; Meijer, Melvin M; Melnitchouk, Alexander S; Menezes, Diego D; Mercadante, Pedro Galli; Merkin, Mikhail M; Meyer, Arnd; Meyer, Jorg Manfred; Miconi, Florian; Mondal, Naba K; Mulhearn, Michael James; Nagy, Elemer; Narain, Meenakshi; Nayyar, Ruchika; Neal, Homer A; Negret, Juan Pablo; Neustroev, Petr V; Nguyen, Huong Thi; Nunnemann, Thomas P; Hernandez Orduna, Jose de Jesus; Osman, Nicolas Ahmed; Osta, Jyotsna; Pal, Arnab; Parashar, Neeti; Parihar, Vivek; Park, Sung Keun; Partridge, Richard A; Parua, Nirmalya; Patwa, Abid; Penning, Bjoern; Perfilov, Maxim Anatolyevich; Peters, Reinhild Yvonne Fatima; Petridis, Konstantinos; Petrillo, Gianluca; Petroff, Pierre; Pleier, Marc-Andre; Podstavkov, Vladimir M; Popov, Alexey V; Prewitt, Michelle; Price, Darren; Prokopenko, Nikolay N; Qian, Jianming; Quadt, Arnulf; Quinn, Gene Breese; Ratoff, Peter N; Razumov, Ivan A; Ripp-Baudot, Isabelle; Rizatdinova, Flera; Rominsky, Mandy Kathleen; Ross, Anthony; Royon, Christophe; Rubinov, Paul Michael; Ruchti, Randal C; Sajot, Gerard; Sanchez-Hernandez, Alberto; Sanders, Michiel P; Santos, Angelo Souza; Savage, David G; Savitskyi, Mykola; Sawyer, HLee; Scanlon, Timothy P; Schamberger, RDean; Scheglov, Yury A; Schellman, Heidi M; Schott, Matthias; Schwanenberger, Christian; Schwienhorst, Reinhard H; Sekaric, Jadranka; Severini, Horst; Shabalina, Elizaveta K; Shary, Viacheslav V; Shaw, Savanna; Shchukin, Andrey A; Simak, Vladislav J; Skubic, Patrick Louis; Slattery, Paul F; Smirnov, Dmitri V; Snow, Gregory R; Snow, Joel Mark; Snyder, Scott Stuart; Soldner-Rembold, Stefan; Sonnenschein, Lars; Soustruznik, Karel; Stark, Jan; Stoyanova, Dina A; Strauss, Michael G; Suter, Louise; Svoisky, Peter V; Titov, Maxim; Tokmenin, Valeriy V; Tsai, Yun-Tse; Tsybychev, Dmitri; Tuchming, Boris; Tully, Christopher George T; Uvarov, Lev; Uvarov, Sergey L; Uzunyan, Sergey A; Van Kooten, Richard J; van Leeuwen, Willem M; Varelas, Nikos; Varnes, Erich W; Vasilyev, Igor A; Verkheev, Alexander Yurievich; Vertogradov, Leonid S; Verzocchi, Marco; Vesterinen, Mika; Vilanova, Didier; Vokac, Petr; Wahl, Horst D; Wang, Michael HLS; Warchol, Jadwiga; Watts, Gordon Thomas; Wayne, Mitchell R; Weichert, Jonas; Welty-Rieger, Leah Christine; Williams, Mark Richard James; Wilson, Graham Wallace; Wobisch, Markus; Wood, Darien Robert; Wyatt, Terence R; Xie, Yunhe; Yamada, Ryuji; Yang, Siqi; Yasuda, Takahiro; Yatsunenko, Yuriy A; Ye, Wanyu; Ye, Zhenyu; Yin, Hang; Yip, Kin; Youn, Sungwoo; Yu, Jiaming; Zennamo, Joseph; Zhao, Tianqi Gilbert; Zhou, Bing; Zhu, Junjie; Zielinski, Marek; Zieminska, Daria; Zivkovic, Lidija

2015-09-22

We present a simultaneous measurement of the forward-backward asymmetry and the top-quark polarization in $t\\bar t$ production in dilepton final states using 9.7 fb$^{-1}$ of proton-antiproton collisions at $\\sqrt{s}=1.96$ TeV with the D0 detector. To reconstruct the distributions of kinematic observables we employ a matrix element technique that calculates the likelihood of the possible $t\\bar t$ kinematic configurations. After accounting for the presence of background events and for calibration effects, we obtain a forward-backward asymmetry of $A^{t\\bar t} = (15.0 \\pm 6.4 \\text{ (stat)} \\pm 4.9 \\text{ (syst)})\\%$ and a top-quark polarization times spin analyzing power in the beam basis of $\\kappa P = (7.2 \\pm 10.5 \\text{ (stat)} \\pm 4.2 \\text{ (syst)})\\%$, with a correlation of $-56\\%$ between the measurements. If we constrain the forward-backward asymmetry to its expected standard model value, we obtain a measurement of the top polarization of $\\kappa P = (11.3 \\pm 9.1 \\text{ (stat)} \\pm 1.9 \\text{ (syst)...

An enhancement of spin polarization by multiphoton pumping in semiconductors

Energy Technology Data Exchange (ETDEWEB)

Miah, M. Idrish, E-mail: m.miah@griffith.edu.au [Queensland Micro- and Nanotechnology Centre, Griffith University, Nathan, Brisbane, QLD 4111 (Australia); Department of Physics, University of Chittagong, Chittagong 4331 (Bangladesh)

2011-08-15

Highlights: {yields} Multiphoton pumping and spin generation in semiconductors. {yields} Optical selection rules for inter-band transitions. {yields} Calculations of spin polarization using band-energy model and the second order perturbation theory. {yields} Enhancement of the electronic spin polarization. - Abstract: A pump-probe spectroscopic study has been carried out in zinc-blende bulk semiconductors. In the semiconductor samples, a spin-polarized carrier population is produced by the absorption of a monochromatic circularly polarized light beam with two-photon energy above the direct band gap in bulk semiconductors. The production of a carrier population with a net spin is a consequence of the optical selection rules for the heavy-hole and light-hole valence-to-conduction band transitions. This production is probed by the spin-dependent transmission of the samples in the time domain. The spin polarization of the conduction-band-electrons in dependences of delay of the probe beam as well as of pumping photon energy is estimated. The spin polarization is found to depolarize rapidly for pumping energy larger than the energy gap of the split-off band to the conduction band. From the polarization decays, the spin relaxation times are also estimated. Compared to one-photon pumping, the results, however, show that an enhancement of the spin-polarization is achieved by multiphoton excitation of the samples. The experimental results are compared with those obtained in calculations using second order perturbation theory of the spin transport model. A good agreement between experiment and theory is obtained. The observed results are discussed in details.

An enhancement of spin polarization by multiphoton pumping in semiconductors

International Nuclear Information System (INIS)

Miah, M. Idrish

2011-01-01

Highlights: → Multiphoton pumping and spin generation in semiconductors. → Optical selection rules for inter-band transitions. → Calculations of spin polarization using band-energy model and the second order perturbation theory. → Enhancement of the electronic spin polarization. - Abstract: A pump-probe spectroscopic study has been carried out in zinc-blende bulk semiconductors. In the semiconductor samples, a spin-polarized carrier population is produced by the absorption of a monochromatic circularly polarized light beam with two-photon energy above the direct band gap in bulk semiconductors. The production of a carrier population with a net spin is a consequence of the optical selection rules for the heavy-hole and light-hole valence-to-conduction band transitions. This production is probed by the spin-dependent transmission of the samples in the time domain. The spin polarization of the conduction-band-electrons in dependences of delay of the probe beam as well as of pumping photon energy is estimated. The spin polarization is found to depolarize rapidly for pumping energy larger than the energy gap of the split-off band to the conduction band. From the polarization decays, the spin relaxation times are also estimated. Compared to one-photon pumping, the results, however, show that an enhancement of the spin-polarization is achieved by multiphoton excitation of the samples. The experimental results are compared with those obtained in calculations using second order perturbation theory of the spin transport model. A good agreement between experiment and theory is obtained. The observed results are discussed in details.

Polar2Grid 2.0: Reprojecting Satellite Data Made Easy

Science.gov (United States)

Hoese, D.; Strabala, K.

2015-12-01

Polar-orbiting multi-band meteorological sensors such as those on the Suomi National Polar-orbiting Partnership (SNPP) satellite pose substantial challenges for taking imagery the last mile to forecast offices, scientific analysis environments, and the general public. To do this quickly and easily, the Cooperative Institute for Meteorological Satellite Studies (CIMSS) at the University of Wisconsin has created an open-source, modular application system, Polar2Grid. This bundled solution automates tools for converting various satellite products like those from VIIRS and MODIS into a variety of output formats, including GeoTIFFs, AWIPS compatible NetCDF files, and NinJo forecasting workstation compatible TIFF images. In addition to traditional visible and infrared imagery, Polar2Grid includes three perceptual enhancements for the VIIRS Day-Night Band (DNB), as well as providing the capability to create sharpened true color, sharpened false color, and user-defined RGB images. Polar2Grid performs conversions and projections in seconds on large swaths of data. Polar2Grid is currently providing VIIRS imagery over the Continental United States, as well as Alaska and Hawaii, from various Direct-Broadcast antennas to operational forecasters at the NOAA National Weather Service (NWS) offices in their AWIPS terminals, within minutes of an overpass of the Suomi NPP satellite. Three years after Polar2Grid development started, the Polar2Grid team is now releasing version 2.0 of the software; supporting more sensors, generating more products, and providing all of its features in an easy to use command line interface.

The Canonical Immediate Early 3 Gene Product pIE611 of Mouse Cytomegalovirus Is Dispensable for Viral Replication but Mediates Transcriptional and Posttranscriptional Regulation of Viral Gene Products.

Science.gov (United States)

Rattay, Stephanie; Trilling, Mirko; Megger, Dominik A; Sitek, Barbara; Meyer, Helmut E; Hengel, Hartmut; Le-Trilling, Vu Thuy Khanh

2015-08-01

Transcription of mouse cytomegalovirus (MCMV) immediate early ie1 and ie3 is controlled by the major immediate early promoter/enhancer (MIEP) and requires differential splicing. Based on complete loss of genome replication of an MCMV mutant carrying a deletion of the ie3-specific exon 5, the multifunctional IE3 protein (611 amino acids; pIE611) is considered essential for viral replication. Our analysis of ie3 transcription resulted in the identification of novel ie3 isoforms derived from alternatively spliced ie3 transcripts. Construction of an IE3-hemagglutinin (IE3-HA) virus by insertion of an in-frame HA epitope sequence allowed detection of the IE3 isoforms in infected cells, verifying that the newly identified transcripts code for proteins. This prompted the construction of an MCMV mutant lacking ie611 but retaining the coding capacity for the newly identified isoforms ie453 and ie310. Using Δie611 MCMV, we demonstrated the dispensability of the canonical ie3 gene product pIE611 for viral replication. To determine the role of pIE611 for viral gene expression during MCMV infection in an unbiased global approach, we used label-free quantitative mass spectrometry to delineate pIE611-dependent changes of the MCMV proteome. Interestingly, further analysis revealed transcriptional as well as posttranscriptional regulation of MCMV gene products by pIE611. Cytomegaloviruses are pathogenic betaherpesviruses persisting in a lifelong latency from which reactivation can occur under conditions of immunosuppression, immunoimmaturity, or inflammation. The switch from latency to reactivation requires expression of immediate early genes. Therefore, understanding of immediate early gene regulation might add insights into viral pathogenesis. The mouse cytomegalovirus (MCMV) immediate early 3 protein (611 amino acids; pIE611) is considered essential for viral replication. The identification of novel protein isoforms derived from alternatively spliced ie3 transcripts prompted

Development of a medium energy polarized neutron facility

International Nuclear Information System (INIS)

Burzynski, S.; Gysin, C.; Henneck, R.; Jourdan, J.; Kohler, D.; Pickar, M.A.; Plattner, G.R.; Sick, I.; Berdoz, A.; Foroughi, F.; Nussbaum, Ch.; Stammbach, Th.

1984-01-01

By the end of 1983 the major construction work for the new polarized neutron source was completed. The source will provide an essentially monoenergetic beam of both polarized and unpolarized neutrons in the energy range from 20 MeV to 70 MeV. Intensities are expected to be approx. 2 x 10 5 neutrons/s.cm 2 per μA of incident proton beam. The polarization is expected to be approx. 0.2 and can be chosen to be either longitudinal or transverse. Protons from the Philips injector cyclotron are focussed onto a liquid deuterium target and produce neutrons via the 2 H(p,n)2p reaction at 0 0 . This process provides essentially monoenergetic neutrons of almost the same energy as the incoming protons. The zero production angle implies that the neutron polarization comes from the polarization of the proton beam only. This allows an easy and fast change of the neutron spin direction by selecting proton spin states in the polarized ion source (atomic beam type). (Auth.)

Bifidobacterium bifidum Actively Changes the Gene Expression Profile Induced by Lactobacillus acidophilus in Murine Dendritic Cells

DEFF Research Database (Denmark)

Weiss, Gudrun Margarethe; Rasmussen, Simon; Fink, Lisbeth Nielsen

2010-01-01

Dendritic cells (DC) play a pivotal regulatory role in activation of both the innate as well as the adaptive immune system by responding to environmental microorganisms. We have previously shown that Lactobacillus acidophilus induces a strong production of the pro-inflammatory and Th1 polarizing...... cytokine IL-12 in DC, whereas bifidobacteria do not induce IL-12 but inhibit the IL-12 production induced by lactobacilli. In the present study, genome-wide microarrays were used to investigate the gene expression pattern of murine DC stimulated with Lactobacillus acidophilus NCFM and Bifidobacterium...

FijiWingsPolarity: An open source toolkit for semi-automated detection of cell polarity.

Science.gov (United States)

Dobens, Leonard L; Shipman, Anna; Axelrod, Jeffrey D

2018-01-02

Epithelial cells are defined by apical-basal and planar cell polarity (PCP) signaling, the latter of which establishes an orthogonal plane of polarity in the epithelial sheet. PCP signaling is required for normal cell migration, differentiation, stem cell generation and tissue repair, and defects in PCP have been associated with developmental abnormalities, neuropathologies and cancers. While the molecular mechanism of PCP is incompletely understood, the deepest insights have come from Drosophila, where PCP is manifest in hairs and bristles across the adult cuticle and organization of the ommatidia in the eye. Fly wing cells are marked by actin-rich trichome structures produced at the distal edge of each cell in the developing wing epithelium and in a mature wing the trichomes orient collectively in the distal direction. Genetic screens have identified key PCP signaling pathway components that disrupt trichome orientation, which has been measured manually in a tedious and error prone process. Here we describe a set of image processing and pattern-recognition macros that can quantify trichome arrangements in micrographs and mark these directly by color, arrow or colored arrow to indicate trichome location, length and orientation. Nearest neighbor calculations are made to exploit local differences in orientation to better and more reliably detect and highlight local defects in trichome polarity. We demonstrate the use of these tools on trichomes in adult wing preps and on actin-rich developing trichomes in pupal wing epithelia stained with phalloidin. FijiWingsPolarity is freely available and will be of interest to a broad community of fly geneticists studying the effect of gene function on PCP.

Measurement of top quark polarization in $t \\overline{t}$ lepton+jets final states

CERN Document Server

Abazov, Victor Mukhamedovich; Acharya, Bannanje Sripath; Adams, Mark Raymond; Adams, Todd; Agnew, James P; Alexeev, Guennadi D; Alkhazov, Georgiy D; Alton, Andrew K; Askew, Andrew Warren; Atkins, Scott; Augsten, Kamil; Aushev, Volodymyr; Aushev, Yegor; Avila, Carlos A; Badaud, Frederique; Bagby, Linda F; Baldin, Boris; Bandurin, Dmitry V; Banerjee, Sunanda; Barberis, Emanuela; Baringer, Philip S; Bartlett, JFrederick; Bassler, Ursula Rita; Bazterra, Victor; Bean, Alice L; Begalli, Marcia; Bellantoni, Leo; Beri, Suman B; Bernardi, Gregorio; Bernhard, Ralf Patrick; Bertram, Iain A; Besancon, Marc; Beuselinck, Raymond; Bhat, Pushpalatha C; Bhatia, Sudeep; Bhatnagar, Vipin; Blazey, Gerald Charles; Blessing, Susan K; Bloom, Kenneth A; Boehnlein, Amber S; Boline, Daniel Dooley; Boos, Edward E; Borissov, Guennadi; Borysova, Maryna; Brandt, Andrew; Brandt, Oleg; Brochmann, Michelle; Brock, Raymond L; Bross, Alan D; Brown, Duncan Paul; Bu, Xue-Bing; Buehler, Marc; Buescher, Volker; Bunichev, Viacheslav Yevgenyevich; Burdin, Sergey; Buszello, Claus Peter; Camacho-Perez, Enrique; Casey, Brendan Cameron Kieran; Castilla-Valdez, Heriberto; Caughron, Seth Aaron; Chakrabarti, Subhendu; Chan, Kwok Ming Leo; Chandra, Avdhesh; Chapon, Emilien; Chen, Guo; Cho, Sung-Woong; Choi, Suyong; Choudhary, Brajesh C; Cihangir, Selcuk; Claes, Daniel R; Clutter, Justace Randall; Cooke, Michael P; Cooper, William Edward; Corcoran, Marjorie D; Couderc, Fabrice; Cousinou, Marie-Claude; Cuth, Jakub; Cutts, David; Das, Amitabha; Davies, Gavin John; de Jong, Sijbrand Jan; De La Cruz-Burelo, Eduard; Deliot, Frederic; Demina, Regina; Denisov, Dmitri S; Denisov, Sergei P; Desai, Satish Vijay; Deterre, Cecile; DeVaughan, Kayle Otis; Diehl, HThomas; Diesburg, Michael; Ding, Pengfei; Dominguez, DAaron M; Dubey, Abhinav Kumar; Dudko, Lev V; Duperrin, Arnaud; Dutt, Suneel; Eads, Michael T; Edmunds, Daniel L; Ellison, John A; Elvira, VDaniel; Enari, Yuji; Evans, Harold G; Evdokimov, Anatoly V; Evdokimov, Valeri N; Faure, Alexandre; Feng, Lei; Ferbel, Thomas; Fiedler, Frank; Filthaut, Frank; Fisher, Wade Cameron; Fisk, HEugene; Fortner, Michael R; Fox, Harald; Franc, Jiri; Fuess, Stuart C; Garbincius, Peter H; Garcia-Bellido, Aran; Garcia-Gonzalez, Jose Andres; Gavrilov, Vladimir B; Geng, Weigang; Gerber, Cecilia Elena; Gershtein, Yuri S; Ginther, George E; Gogota, Olga; Golovanov, Georgy Anatolievich; Grannis, Paul D; Greder, Sebastien; Greenlee, Herbert B; Grenier, Gerald Jean; Gris, Phillipe Luc; Grivaz, Jean-Francois; Grohsjean, Alexander; Gruenendahl, Stefan; Gruenewald, Martin Werner; Guillemin, Thibault; Gutierrez, Gaston R; Gutierrez, Phillip; Haley, Joseph Glenn Biddle; Han, Liang; Harder, Kristian; Harel, Amnon; Hauptman, John Michael; Hays, Jonathan M; Head, Tim; Hebbeker, Thomas; Hedin, David R; Hegab, Hatim; Heinson, Ann; Heintz, Ulrich; Hensel, Carsten; Heredia-De La Cruz, Ivan; Herner, Kenneth Richard; Hesketh, Gavin G; Hildreth, Michael D; Hirosky, Robert James; Hoang, Trang; Hobbs, John D; Hoeneisen, Bruce; Hogan, Julie; Hohlfeld, Mark; Holzbauer, Jenny Lyn; Howley, Ian James; Hubacek, Zdenek; Hynek, Vlastislav; Iashvili, Ia; Ilchenko, Yuriy; Illingworth, Robert A; Ito, Albert S; Jabeen, Shabnam; Jaffre, Michel J; Jayasinghe, Ayesh; Jeong, Min-Soo; Jesik, Richard L; Jiang, Peng; Johns, Kenneth Arthur; Johnson, Emily; Johnson, Marvin E; Jonckheere, Alan M; Jonsson, Per Martin; Joshi, Jyoti; Jung, Andreas Werner; Juste, Aurelio; Kajfasz, Eric; Karmanov, Dmitriy Y; Katsanos, Ioannis; Kaur, Manbir; Kehoe, Robert Leo Patrick; Kermiche, Smain; Khalatyan, Norayr; Khanov, Alexander; Kharchilava, Avto; Kharzheev, Yuri N; Kiselevich, Ivan Lvovich; Kohli, Jatinder M; Kozelov, Alexander V; Kraus, James Alexander; Kumar, Ashish; Kupco, Alexander; Kurca, Tibor; Kuzmin, Valentin Alexandrovich; Lammers, Sabine Wedam; Lebrun, Patrice; Lee, Hyeon-Seung; Lee, Seh-Wook; Lee, William M; Lei, Xiaowen; Lellouch, Jeremie; Li, Dikai; Li, Hengne; Li, Liang; Li, Qi-Zhong; Lim, Jeong Ku; Lincoln, Donald W; Linnemann, James Thomas; Lipaev, Vladimir V; Lipton, Ronald J; Liu, Huanzhao; Liu, Yanwen; Lobodenko, Alexandre; Lokajicek, Milos; Lopes de Sa, Rafael; Luna-Garcia, Rene; Lyon, Adam Leonard; Maciel, Arthur KA; Madar, Romain; Magana-Villalba, Ricardo; Malik, Sudhir; Malyshev, Vladimir L; Mansour, Jason; Martinez-Ortega, Jorge; McCarthy, Robert L; Mcgivern, Carrie Lynne; Meijer, Melvin M; Melnitchouk, Alexander S; Menezes, Diego D; Mercadante, Pedro Galli; Merkin, Mikhail M; Meyer, Arnd; Meyer, Jorg Manfred; Miconi, Florian; Mondal, Naba K; Mulhearn, Michael James; Nagy, Elemer; Narain, Meenakshi; Nayyar, Ruchika; Neal, Homer A; Negret, Juan Pablo; Neustroev, Petr V; Nguyen, Huong Thi; Nunnemann, Thomas P; Hernandez Orduna, Jose de Jesus; Osman, Nicolas Ahmed; Pal, Arnab; Parashar, Neeti; Parihar, Vivek; Park, Sung Keun; Partridge, Richard A; Parua, Nirmalya; Patwa, Abid; Penning, Bjoern; Perfilov, Maxim Anatolyevich; Peters, Reinhild Yvonne Fatima; Petridis, Konstantinos; Petrillo, Gianluca; Petroff, Pierre; Pleier, Marc-Andre; Podstavkov, Vladimir M; Popov, Alexey V; Prewitt, Michelle; Price, Darren; Prokopenko, Nikolay N; Qian, Jianming; Quadt, Arnulf; Quinn, Gene Breese; Ratoff, Peter N; Razumov, Ivan A; Ripp-Baudot, Isabelle; Rizatdinova, Flera; Rominsky, Mandy Kathleen; Ross, Anthony; Royon, Christophe; Rubinov, Paul Michael; Ruchti, Randal C; Sajot, Gerard; Sanchez-Hernandez, Alberto; Sanders, Michiel P; Santos, Angelo Souza; Savage, David G; Savitskyi, Mykola; Sawyer, HLee; Scanlon, Timothy P; Schamberger, RDean; Scheglov, Yury A; Schellman, Heidi M; Schott, Matthias; Schwanenberger, Christian; Schwienhorst, Reinhard H; Sekaric, Jadranka; Severini, Horst; Shabalina, Elizaveta K; Shary, Viacheslav V; Shaw, Savanna; Shchukin, Andrey A; Simak, Vladislav J; Skubic, Patrick Louis; Slattery, Paul F; Snow, Gregory R; Snow, Joel Mark; Snyder, Scott Stuart; Soldner-Rembold, Stefan; Sonnenschein, Lars; Soustruznik, Karel; Stark, Jan; Stefaniuk, Nazar; Stoyanova, Dina A; Strauss, Michael G; Suter, Louise; Svoisky, Peter V; Titov, Maxim; Tokmenin, Valeriy V; Tsai, Yun-Tse; Tsybychev, Dmitri; Tuchming, Boris; Tully, Christopher George T; Uvarov, Lev; Uvarov, Sergey L; Uzunyan, Sergey A; Van Kooten, Richard J; van Leeuwen, Willem M; Varelas, Nikos; Varnes, Erich W; Vasilyev, Igor A; Verkheev, Alexander Yurievich; Vertogradov, Leonid S; Verzocchi, Marco; Vesterinen, Mika; Vilanova, Didier; Vokac, Petr; Wahl, Horst D; Wang, Michael HLS; Warchol, Jadwiga; Watts, Gordon Thomas; Wayne, Mitchell R; Weichert, Jonas; Welty-Rieger, Leah Christine; Williams, Mark Richard James; Wilson, Graham Wallace; Wobisch, Markus; Wood, Darien Robert; Wyatt, Terence R; Xie, Yunhe; Yamada, Ryuji; Yang, Siqi; Yasuda, Takahiro; Yatsunenko, Yuriy A; Ye, Wanyu; Ye, Zhenyu; Yin, Hang; Yip, Kin; Youn, Sungwoo; Yu, Jiaming; Zennamo, Joseph; Zhao, Tianqi Gilbert; Zhou, Bing; Zhu, Junjie; Zielinski, Marek; Zieminska, Daria; Zivkovic, Lidija

2017-01-09

We present a study of top quark polarization in $t \\overline{t}$ events produced in $p \\overline{p}$ collisions at $\\sqrt{s}=1.96$ TeV. Data correspond to 9.7 fb$^{-1}$ collected with the D0 detector at the Tevatron. We use final states containing a lepton and at least three jets. The polarization is measured using the distribution of leptons along the beam and helicity axes, and the axis normal to the production plane. This is the first measurement of top quark polarization at the Tevatron in $\\ell$+jets final states, and first measurement of transverse polarization in $t \\overline{t}$ production. The observed distributions are consistent with the standard model.

Neonatal plasma polarizes TLR4-mediated cytokine responses towards low IL-12p70 and high IL-10 production via distinct factors.

Directory of Open Access Journals (Sweden)

Mirjam E Belderbos

Full Text Available Human neonates are highly susceptible to infection, which may be due in part to impaired innate immune function. Neonatal Toll-like receptor (TLR responses are biased against the generation of pro-inflammatory/Th1-polarizing cytokines, yet the underlying mechanisms are incompletely defined. Here, we demonstrate that neonatal plasma polarizes TLR4-mediated cytokine production. When exposed to cord blood plasma, mononuclear cells (MCs produced significantly lower TLR4-mediated IL-12p70 and higher IL-10 compared to MC exposed to adult plasma. Suppression by neonatal plasma of TLR4-mediated IL-12p70 production, but not induction of TLR4-mediated IL-10 production, was maintained up to the age of 1 month. Cord blood plasma conferred a similar pattern of MC cytokine responses to TLR3 and TLR8 agonists, demonstrating activity towards both MyD88-dependent and MyD88-independent agonists. The factor causing increased TLR4-mediated IL-10 production by cord blood plasma was heat-labile, lost after protein depletion and independent of lipoprotein binding protein (LBP or soluble CD14 (sCD14. The factor causing inhibition of TLR4-mediated IL-12p70 production by cord blood plasma was resistant to heat inactivation or protein depletion and was independent of IL-10, vitamin D and prostaglandin E2. In conclusion, human neonatal plasma contains at least two distinct factors that suppress TLR4-mediated IL-12p70 production or induce IL-10 or production. Further identification of these factors will provide insight into the ontogeny of innate immune development and might identify novel targets for the prevention and treatment of neonatal infection.

Neonatal Plasma Polarizes TLR4-Mediated Cytokine Responses towards Low IL-12p70 and High IL-10 Production via Distinct Factors

Science.gov (United States)

Belderbos, Mirjam E.; Levy, Ofer; Stalpers, Femke; Kimpen, Jan L.; Meyaard, Linde; Bont, Louis

2012-01-01

Human neonates are highly susceptible to infection, which may be due in part to impaired innate immune function. Neonatal Toll-like receptor (TLR) responses are biased against the generation of pro-inflammatory/Th1-polarizing cytokines, yet the underlying mechanisms are incompletely defined. Here, we demonstrate that neonatal plasma polarizes TLR4-mediated cytokine production. When exposed to cord blood plasma, mononuclear cells (MCs) produced significantly lower TLR4-mediated IL-12p70 and higher IL-10 compared to MC exposed to adult plasma. Suppression by neonatal plasma of TLR4-mediated IL-12p70 production, but not induction of TLR4-mediated IL-10 production, was maintained up to the age of 1 month. Cord blood plasma conferred a similar pattern of MC cytokine responses to TLR3 and TLR8 agonists, demonstrating activity towards both MyD88-dependent and MyD88-independent agonists. The factor causing increased TLR4-mediated IL-10 production by cord blood plasma was heat-labile, lost after protein depletion and independent of lipoprotein binding protein (LBP) or soluble CD14 (sCD14). The factor causing inhibition of TLR4-mediated IL-12p70 production by cord blood plasma was resistant to heat inactivation or protein depletion and was independent of IL-10, vitamin D and prostaglandin E2. In conclusion, human neonatal plasma contains at least two distinct factors that suppress TLR4-mediated IL-12p70 production or induce IL-10 or production. Further identification of these factors will provide insight into the ontogeny of innate immune development and might identify novel targets for the prevention and treatment of neonatal infection. PMID:22442690

Overexpression of D-Xylose Reductase (xyl1 Gene and Antisense Inhibition of D-Xylulokinase (xyiH Gene Increase Xylitol Production in Trichoderma reesei

Directory of Open Access Journals (Sweden)

Yuanyuan Hong

2014-01-01

Full Text Available T. reesei is an efficient cellulase producer and biomass degrader. To improve xylitol production in Trichoderma reesei strains by genetic engineering, two approaches were used in this study. First, the presumptive D-xylulokinase gene in T. reesei (xyiH, which has high homology to known fungi D-xylulokinase genes, was silenced by transformation of T. reesei QM9414 strain with an antisense construct to create strain S6-2-2. The expression of the xyiH gene in the transformed strain S6-2-2 decreased at the mRNA level, and D-xylulokinase activity decreased after 48 h of incubation. This led to an increase in xylitol production from undetectable levels in wild-type T. reesei QM9414 to 8.6 mM in S6-2-2. The T. reesei Δxdh is a xylose dehydrogenase knockout strain with increased xylitol production compared to the wild-type T. reesei QM9414 (22.8 mM versus undetectable. The copy number of the xylose reductase gene (xyl1 in T. reesei Δxdh strain was increased by genetic engineering to create a new strain Δ9-5-1. The Δ9-5-1 strain showed a higher xyl1 expression and a higher yield of xylose reductase, and xylitol production was increased from 22.8 mM to 24.8 mM. Two novel strains S6-2-2 and Δ9-5-1 are capable of producing higher yields of xylitol. T. reesei has great potential in the industrial production of xylitol.

Overexpression of D-Xylose Reductase (xyl1) Gene and Antisense Inhibition of D-Xylulokinase (xyiH) Gene Increase Xylitol Production in Trichoderma reesei

Science.gov (United States)

Hong, Yuanyuan; Dashtban, Mehdi; Kepka, Greg; Chen, Sanfeng; Qin, Wensheng

2014-01-01

T. reesei is an efficient cellulase producer and biomass degrader. To improve xylitol production in Trichoderma reesei strains by genetic engineering, two approaches were used in this study. First, the presumptive D-xylulokinase gene in T. reesei (xyiH), which has high homology to known fungi D-xylulokinase genes, was silenced by transformation of T. reesei QM9414 strain with an antisense construct to create strain S6-2-2. The expression of the xyiH gene in the transformed strain S6-2-2 decreased at the mRNA level, and D-xylulokinase activity decreased after 48 h of incubation. This led to an increase in xylitol production from undetectable levels in wild-type T. reesei QM9414 to 8.6 mM in S6-2-2. The T. reesei Δxdh is a xylose dehydrogenase knockout strain with increased xylitol production compared to the wild-type T. reesei QM9414 (22.8 mM versus undetectable). The copy number of the xylose reductase gene (xyl1) in T. reesei Δxdh strain was increased by genetic engineering to create a new strain Δ9-5-1. The Δ9-5-1 strain showed a higher xyl1 expression and a higher yield of xylose reductase, and xylitol production was increased from 22.8 mM to 24.8 mM. Two novel strains S6-2-2 and Δ9-5-1 are capable of producing higher yields of xylitol. T. reesei has great potential in the industrial production of xylitol. PMID:25013760

COMPASS polarized Drell-Yan experiment

CERN Document Server

Doshita, Norihiro

2016-01-01

The COMPASS II started at 2012 that includes polarized Drell-Yan program with a polarized solid target. The availability of pion beam provides an access to the Drell-Yan physics throughout the process where quark(target)-antiquark(beam) pair annihilates electromagnetically with a production of dilepton pair. Study of angular dependencies of the Drell-Yan process cross-section allows us to access to parton distribution functions (PDFs) or, more precisely, a convolutions of various PDFs. The transversely polarized target together with negative pion beam is an important feature of the COMPASS Drell-Yan experiment, that provides us with unique data on transverse momentum dependent (TMD) PDFs. After a plot run in 2014, the experiment has just started in 2015. The role of the Drell-Yan experiment at COMPASS in TMD PDFs study, with a comparison to semi-inclusive deep inelastic scattering experiment, is described. The experimental set-up, the status of the data taking in 2015 and preliminary analysis results in the 2...

Role of plnB gene in the regulation of bacteriocin production in Lactobacillus paraplantarum L-XM1.

Science.gov (United States)

Zhang, Xiangmei; Shang, Nan; Zhang, Xu; Gui, Meng; Li, Pinglan

2013-06-12

Homologues of plnB gene have been shown to participate in regulation of bacteriocin production through quorum sensing system in other organisms, to investigate the possible role of plnB gene in Lactobacillus paraplantarum L-XM1, we cloned and insertionally inactivated the plnB gene. The plnB knockout mutant ΔplnB21 showed loss of bacteriocin production, its Bac⁺ phenotype could not be restored even after the addition of PlnA. Furthermore, reverse transcription-PCR analysis from total RNA preparations showed that the bacteriocin structural genes of the plnEF and plnJK were not transcribed in the plnB knockout mutant compared with the wild-type strain. It was therefore concluded that plnB is invovled in a quorum sensing based bacteriocin production. This is the first demonstration of a role for plnB by gene knockout in L. paraplantarum. Copyright © 2012 Elsevier GmbH. All rights reserved.

Regulation of the E. coli SOS response by the lexA gene product

International Nuclear Information System (INIS)

Brent, R.

1983-01-01

In an Escherichia coli that is growing normally, transcription of many genes is repressed by the product of the lexA gene. If cellular DNA is damaged, proteolytically competent recA protein (recA protease) inactivates lexA protein and these genes are induced. Many of the cellular phenomena observed during the cellular response to DNA damage (the SOS response) are the consequence of the expression of these lexA-prepressed genes. Since the SOS response of E. coli has recently been the subject of a comprehensive review, in this paper I would like to concentrate on some modifications to the picture based on new data. 12 references, 2 figures

The inhibition of N2O production by ocean acidification in cold temperate and polar waters

Science.gov (United States)

Rees, Andrew P.; Brown, Ian J.; Jayakumar, Amal; Ward, Bess B.

2016-05-01

The effects of ocean acidification (OA) on nitrous oxide (N2O) production and on the community composition of ammonium oxidizing archaea (AOA) were examined in the northern and southern sub-polar and polar Atlantic Ocean. Two research cruises were performed during June 2012 between the North Sea and Arctic Greenland and Barent Seas, and in January-February 2013 to the Antarctic Scotia Sea. Seven stations were occupied in all during which shipboard experimental manipulations of the carbonate chemistry were performed through additions of NaHCO3-+HCl in order to examine the impact of short-term (48 h for N2O and between 96 and 168 h for AOA) exposure to control and elevated conditions of OA. During each experiment, triplicate incubations were performed at ambient conditions and at 3 lowered levels of pH which varied between 0.06 and 0.4 units according to the total scale and which were targeted at CO2 partial pressures of 500, 750 and 1000 μatm. The AOA assemblage in both Arctic and Antarctic regions was dominated by two major archetypes that represent the marine AOA clades most often detected in seawater. There were no significant changes in AOA assemblage composition between the beginning and end of the incubation experiments. N2O production was sensitive to decreasing pHT at all stations and decreased by between 2.4% and 44% with reduced pHT values of between 0.06 and 0.4. The reduction in N2O yield from nitrification was directly related to a decrease of between 28% and 67% in available NH3 as a result of the pH driven shift in the NH3:NH4+ equilibrium. The maximum reduction in N2O production at conditions projected for the end of the 21st century was estimated to be 0.82 Tg N y-1.

Nuclear-optical methods for production of polarized photons with energies of a few hundred GeV

International Nuclear Information System (INIS)

Ispiryan, K.A.; Ispiryan, M.K.

1985-01-01

The absorption coefficients of linearly polarized photons passing through a crystal in parallel to its crystallographic planes are calculated. The methods of determination of the obtainable degree of polarization as well as of the intensity losses for the cases when non-polarized photon beams pass through various crystals in parallel to the planes (110) are described. The energy dependence of the thickness of the quarter-wave plate crystals transforming the linear polarization of the beam into circular one is obtained

Polar Voices: Relaying the Science and Story of Polar Climate Change through Podcast

Science.gov (United States)

Moloney, M.; Quinney, A.; Murray, M. S.

2016-12-01

The resurgence of audio programming with the advent of podcasting in the early 2000's spawned a new medium for communicating advances in science, research, and technology. To capitalize on this informal educational outlet, the Arctic Institute of North America (AINA) partnered with the International Arctic Research Center, the University of Alaska Fairbanks, and the UA Museum of the North to develop a podcast series called PoLAR Voices for the Polar Learning and Responding (PoLAR) Climate Change Education Partnership. Now entering its third season of production, PoLAR Voices has facilitated the communication of scientific knowledge regarding the impact of climate change on the Arctic and Antarctic from the perspectives of both scientific researchers and Arctic indigenous peoples. We present a holistic program detailing both data and research related to climate change in addition to personal stories from those people and communities most affected. An evaluation of the program has been conducted by the Goodman Research Group to assess the effectiveness of the program for relaying the whole story of climate change to the public. The results of this assessment will be used to further develop the program to effectively reach larger and more diverse audiences. The series is currently available on thepolarhub.org and iTunes, and we are exploring opportunities to air the program on radio to reach as many people as possible.

Bombyx mori nucleopolyhedrovirus BM5 protein regulates progeny virus production and viral gene expression

International Nuclear Information System (INIS)

Kokusho, Ryuhei; Koh, Yoshikazu; Fujimoto, Masaru; Shimada, Toru; Katsuma, Susumu

2016-01-01

Bombyx mori nucleopolyhedrovirus (BmNPV) orf5 (Bm5) is a core gene of lepidopteran baculoviruses and encodes the protein with the conserved amino acid residues (DUF3627) in its C-terminus. Here, we found that Bm5 disruption resulted in lower titers of budded viruses and fewer numbers of occlusion bodies (OBs) in B. mori cultured cells and larvae, although viral genome replication was not affected. Bm5 disruption also caused aberrant expression of various viral genes at the very late stage of infection. Immunocytochemical analysis revealed that BM5 localized to the nuclear membrane. We also found that DUF3627 is important for OB production, transcriptional regulation of viral genes, and subcellular localization of BM5. Compared with wild-type BmNPV infection, larval death was delayed when B. mori larvae were infected with Bm5 mutants. These results suggest that BM5 is involved in progeny virus production and regulation of viral gene expression at the very late stage of infection. -- Highlights: •The role of BmNPV BM5 protein was examined in B. mori cultured cells and larvae. •BM5 contributes to efficient production of budded viruses and occlusion bodies. •BM5 regulates viral gene expression at the very late stage of infection. •BM5 dominantly localizes to the nuclear membrane. •Bm5 mutant showed v-cath down-regulation and resulting delay of larval death.

Bombyx mori nucleopolyhedrovirus BM5 protein regulates progeny virus production and viral gene expression

Energy Technology Data Exchange (ETDEWEB)

Kokusho, Ryuhei, E-mail: kokusho@ss.ab.a.u-tokyo.ac.jp; Koh, Yoshikazu; Fujimoto, Masaru; Shimada, Toru; Katsuma, Susumu, E-mail: katsuma@ss.ab.a.u-tokyo.ac.jp

2016-11-15

Bombyx mori nucleopolyhedrovirus (BmNPV) orf5 (Bm5) is a core gene of lepidopteran baculoviruses and encodes the protein with the conserved amino acid residues (DUF3627) in its C-terminus. Here, we found that Bm5 disruption resulted in lower titers of budded viruses and fewer numbers of occlusion bodies (OBs) in B. mori cultured cells and larvae, although viral genome replication was not affected. Bm5 disruption also caused aberrant expression of various viral genes at the very late stage of infection. Immunocytochemical analysis revealed that BM5 localized to the nuclear membrane. We also found that DUF3627 is important for OB production, transcriptional regulation of viral genes, and subcellular localization of BM5. Compared with wild-type BmNPV infection, larval death was delayed when B. mori larvae were infected with Bm5 mutants. These results suggest that BM5 is involved in progeny virus production and regulation of viral gene expression at the very late stage of infection. -- Highlights: •The role of BmNPV BM5 protein was examined in B. mori cultured cells and larvae. •BM5 contributes to efficient production of budded viruses and occlusion bodies. •BM5 regulates viral gene expression at the very late stage of infection. •BM5 dominantly localizes to the nuclear membrane. •Bm5 mutant showed v-cath down-regulation and resulting delay of larval death.

Experimental techniques and physics in a polarized storage ring

International Nuclear Information System (INIS)

Dueren, M.

1994-12-01

In May 1994 spin rotators were brought into operation at HERA and for the first time longitudinal electron polarization was produced in a high energy storage ring. A Compton polarimeter is used for optimization of the polarization to values of up to 70%. HERMES is a new experiment designed to study the spin structure of the nucleon by deep inelastic scattering from the proton and neutron using the longitudinally polarized electron beam at HERA and internal polarized gas targets. The density of the gas targets is increased by a storage cell by two orders of magnitude compared to a free gas jet. Data taking begins in 1995 with measurements on polarized spin structure functions and also on semi-inclusive polarized hadron production. The inclusive physics program is in competition with experiments at CERN and SLAC. The semi-inclusive physics program promises to solve basic questions of the spin structure of matter by decomposing the spin contributions of the different quark flavors. (orig.)

Identification and manipulation of the pleuromutilin gene cluster from Clitopilus passeckerianus for increased rapid antibiotic production

Science.gov (United States)

Bailey, Andy M.; Alberti, Fabrizio; Kilaru, Sreedhar; Collins, Catherine M.; de Mattos-Shipley, Kate; Hartley, Amanda J.; Hayes, Patrick; Griffin, Alison; Lazarus, Colin M.; Cox, Russell J.; Willis, Christine L.; O'Dwyer, Karen; Spence, David W.; Foster, Gary D.

2016-05-01

Semi-synthetic derivatives of the tricyclic diterpene antibiotic pleuromutilin from the basidiomycete Clitopilus passeckerianus are important in combatting bacterial infections in human and veterinary medicine. These compounds belong to the only new class of antibiotics for human applications, with novel mode of action and lack of cross-resistance, representing a class with great potential. Basidiomycete fungi, being dikaryotic, are not generally amenable to strain improvement. We report identification of the seven-gene pleuromutilin gene cluster and verify that using various targeted approaches aimed at increasing antibiotic production in C. passeckerianus, no improvement in yield was achieved. The seven-gene pleuromutilin cluster was reconstructed within Aspergillus oryzae giving production of pleuromutilin in an ascomycete, with a significant increase (2106%) in production. This is the first gene cluster from a basidiomycete to be successfully expressed in an ascomycete, and paves the way for the exploitation of a metabolically rich but traditionally overlooked group of fungi.

Production of polarized vector mesons off nuclei

International Nuclear Information System (INIS)

Kopeliovich, B. Z.; Nemchik, J.; Schmidt, Ivan

2007-01-01

Using the light-cone QCD dipole formalism we investigate manifestations of color transparency (CT) and coherence length (CL) effects in electroproduction of longitudinally (L) and transversally (T) polarized vector mesons. Motivated by forthcoming data from the HERMES experiment we predict both the A and Q 2 dependence of the L/T ratios for ρ 0 mesons produced coherently and incoherently off nuclei. For an incoherent reaction the CT and CL effects add up and result in a monotonic A dependence of the L/T ratio at different values of Q 2 . In contrast, for a coherent process the contraction of the CL with Q 2 causes an effect opposite to that of CT and we expect quite a nontrivial A dependence

Research on generating various polarization-modes in polarized illumination system

Science.gov (United States)

Huang, Jinping; Lin, Wumei; Fan, Zhenjie

2013-08-01

With the increase of the numerical aperture (NA), the polarization of light affects the imaging quality of projection lens more significantly. On the contrary, according to the mask pattern, the resolution of projection lens can be improved by using the polarized illumination. That is to say, using the corresponding polarized beam (or polarization-mode) along with the off-axis illumination will improve the resolution and the imaging quality of the of projection lens. Therefore, the research on the generation of various polarization modes and its conversion methods become more and more important. In order to realize various polarization modes in polarized illumination system, after read a lot of references, we provide a way that fitting for the illumination system with the wavelength of 193nm.Six polarization-modes and a depolarized mode are probably considered. Wave-plate stack is used to generate linearly polarization-mode, which have a higher degree polarization. In order to generate X-Y and Y-X polarization mode, the equipment consisting of four sectors of λ/2 wave plate was used. We combined 16 sectors of λ/2 wave plate which have different orientations of the "slow" axis to generate radial and azimuthal polarization. Finally, a multi-polarization control device was designed. Using the kind of multi-polarization control device which applying this method could help to choose the polarization modes conveniently and flexibility for the illumination system.

Measurement of the ψ(2S) Production Polarization in pbarp Collisions at √s = 1.8 TeV

Science.gov (United States)

Ngan, Ching-Yuk P.

1997-04-01

We present a measurement of the production polarization of ψ(2S) mesons in pbarp collisions. We consider the decay mode ψ(2S) -> J/ψ π^+ π^- with J/ψ -> μ^+ μ^- in a 110 pb-1 sample collected by the CDF detector during 1992-95. Results are discussed in the context of the color-octet fragmentation production mechanism which is a possible explanation of the anomalous prompt ψ(2S) production cross section. \\$^*We thank the Fermilab staff and the technical staffs of the participating institutions for their vital contributions. This work was supported by the U.S. Department of Energy and National Science Foundation; the Italian Istituto Nazionale di Fisica Nucleare; the Ministry of Education, Science and Culture of Japan; the Natural Sciences and Engineering Research Council of Canada; the National Science Council of the Republic of China; and the A. P. Sloan Foundation.

Polarization properties of linearly polarized parabolic scaling Bessel beams

Energy Technology Data Exchange (ETDEWEB)

Guo, Mengwen; Zhao, Daomu, E-mail: zhaodaomu@yahoo.com

2016-10-07

The intensity profiles for the dominant polarization, cross polarization, and longitudinal components of modified parabolic scaling Bessel beams with linear polarization are investigated theoretically. The transverse intensity distributions of the three electric components are intimately connected to the topological charge. In particular, the intensity patterns of the cross polarization and longitudinal components near the apodization plane reflect the sign of the topological charge. - Highlights: • We investigated the polarization properties of modified parabolic scaling Bessel beams with linear polarization. • We studied the evolution of transverse intensity profiles for the three components of these beams. • The intensity patterns of the cross polarization and longitudinal components can reflect the sign of the topological charge.

Measurement of "pretzelosity" asymmetry of charged pion production in semi-inclusive deep inelastic scattering on a polarized 3He target

Science.gov (United States)

Zhang, Y.; Qian, X.; Allada, K.; Dutta, C.; Huang, J.; Katich, J.; Wang, Y.; Aniol, K.; Annand, J. R. M.; Averett, T.; Benmokhtar, F.; Bertozzi, W.; Bradshaw, P. C.; Bosted, P.; Camsonne, A.; Canan, M.; Cates, G. D.; Chen, C.; Chen, J.-P.; Chen, W.; Chirapatpimol, K.; Chudakov, E.; Cisbani, E.; Cornejo, J. C.; Cusanno, F.; Dalton, M. M.; Deconinck, W.; de Jager, C. W.; De Leo, R.; Deng, X.; Deur, A.; Ding, H.; Dolph, P. A. M.; Dutta, D.; El Fassi, L.; Frullani, S.; Gao, H.; Garibaldi, F.; Gaskell, D.; Gilad, S.; Gilman, R.; Glamazdin, O.; Golge, S.; Guo, L.; Hamilton, D.; Hansen, O.; Higinbotham, D. W.; Holmstrom, T.; Huang, M.; Ibrahim, H. F.; Iodice, M.; Jiang, X.; Jin, G.; Jones, M. K.; Kelleher, A.; Kim, W.; Kolarkar, A.; Korsch, W.; LeRose, J. J.; Li, X.; Li, Y.; Lindgren, R.; Liyanage, N.; Long, E.; Lu, H.-J.; Margaziotis, D. J.; Markowitz, P.; Marrone, S.; McNulty, D.; Meziani, Z.-E.; Michaels, R.; Moffit, B.; Muñoz Camacho, C.; Nanda, S.; Narayan, A.; Nelyubin, V.; Norum, B.; Oh, Y.; Osipenko, M.; Parno, D.; Peng, J. C.; Phillips, S. K.; Posik, M.; Puckett, A. J. R.; Qiang, Y.; Rakhman, A.; Ransome, R. D.; Riordan, S.; Saha, A.; Sawatzky, B.; Schulte, E.; Shahinyan, A.; Shabestari, M. H.; Širca, S.; Stepanyan, S.; Subedi, R.; Sulkosky, V.; Tang, L.-G.; Tobias, W. A.; Urciuoli, G. M.; Vilardi, I.; Wang, K.; Wojtsekhowski, B.; Yan, X.; Yao, H.; Ye, Y.; Ye, Z.; Yuan, L.; Zhan, X.; Zhang, Y.-W.; Zhao, B.; Zheng, X.; Zhu, L.; Zhu, X.; Zong, X.; Jefferson Lab Hall A Collaboration

2014-11-01

An experiment to measure single-spin asymmetries of semi-inclusive production of charged pions in deep-inelastic scattering on a transversely polarized 3He target was performed at Jefferson Laboratory in the kinematic region of 0.16 polarization approximation, we extracted the corresponding neutron asymmetries from the measured 3He asymmetries and cross-section ratios between the proton and 3He. Our results show that both π± on 3He and on neutron pretzelosity asymmetries are consistent with zero within experimental uncertainties.

Geissen polarization facility. I. Lambshift source

Energy Technology Data Exchange (ETDEWEB)

Arnold, W; Berg, H; Krause, H H; Ulbricht, J; Clausnitzer, G [Giessen Univ. (Germany, F.R.). Strahlenzentrum

1977-06-15

A source for the production of polarized negative hydrogen or deuterium ions following the Lambshift method is described. A duoplasmatron with expansion cup and extended ion optics is used. The polarization is generated by a diabetic zero field passage of the metastable atoms. For precision experiments the polarization can be switched 'on' and 'off' with a frequency of 1 kHz by a disturbance with a transverse magnetic field. The quantization axis can be rotated with a Wien filter. All source components are installed in a compact vacuum chamber, which allows high effective pumping speeds. The overal length of the source including the Wien filter is 1.7m. With a 10mm diameter cesium canal typical H/sup -/ currents of 0.6-0.75 ..mu..A (P=0.7 to 0.75) and maximum currents of 0.9..mu..A are obtained.

Platform for Manipulating Polarization Modes Realized with Jones Vectors in MATHEMATICA

Directory of Open Access Journals (Sweden)

Yong-Dae Choi

2015-06-01

Full Text Available The fundamental conception in physics of the propagation of the electromagnetic wave polarization in matter is newly understood as the cardinal keyword in free-space quantum communication technology and cosmology in astrophysics. Interactive visualization of the propagation mechanism of polarized electromagnetism in a medium with its helicity has accordingly received attention from scientists exploiting the protocol of quantum key distribution (QKD to guarantee unconditional security in cryptography communication. We have provided a dynamic polarization platform for presenting the polarization modes of a transverse electromagnetic wave, converting the state of polarization through the arrangement of optical elements, using Jones vectors calculations in Methematica. The platform graphically simulates the mechanism of production and propagation of the polarized waves in a medium while satisfying Maxwell's equations.

Identification of Enzyme Genes Using Chemical Structure Alignments of Substrate-Product Pairs.

Science.gov (United States)

Moriya, Yuki; Yamada, Takuji; Okuda, Shujiro; Nakagawa, Zenichi; Kotera, Masaaki; Tokimatsu, Toshiaki; Kanehisa, Minoru; Goto, Susumu

2016-03-28

Although there are several databases that contain data on many metabolites and reactions in biochemical pathways, there is still a big gap in the numbers between experimentally identified enzymes and metabolites. It is supposed that many catalytic enzyme genes are still unknown. Although there are previous studies that estimate the number of candidate enzyme genes, these studies required some additional information aside from the structures of metabolites such as gene expression and order in the genome. In this study, we developed a novel method to identify a candidate enzyme gene of a reaction using the chemical structures of the substrate-product pair (reactant pair). The proposed method is based on a search for similar reactant pairs in a reference database and offers ortholog groups that possibly mediate the given reaction. We applied the proposed method to two experimentally validated reactions. As a result, we confirmed that the histidine transaminase was correctly identified. Although our method could not directly identify the asparagine oxo-acid transaminase, we successfully found the paralog gene most similar to the correct enzyme gene. We also applied our method to infer candidate enzyme genes in the mesaconate pathway. The advantage of our method lies in the prediction of possible genes for orphan enzyme reactions where any associated gene sequences are not determined yet. We believe that this approach will facilitate experimental identification of genes for orphan enzymes.

Induced polarization of Λ (1116) in kaon electroproduction

Science.gov (United States)

Gabrielyan, M.; Raue, B. A.; Carman, D. S.; Park, K.; Adhikari, K. P.; Adikaram, D.; Amaryan, M. J.; Anefalos Pereira, S.; Avakian, H.; Ball, J.; Baltzell, N. A.; Battaglieri, M.; Baturin, V.; Bedlinskiy, I.; Biselli, A. S.; Bono, J.; Boiarinov, S.; Briscoe, W. J.; Brooks, W. K.; Burkert, V. D.; Cao, T.; Celentano, A.; Chandavar, S.; Charles, G.; Colaneri, L.; Cole, P. L.; Contalbrigo, M.; Cortes, O.; Crede, V.; D'Angelo, A.; Dashyan, N.; De Vita, R.; De Sanctis, E.; Deur, A.; Djalali, C.; Doughty, D.; Dupre, R.; El Fassi, L.; Eugenio, P.; Fedotov, G.; Fegan, S.; Fleming, J. A.; Forest, T. A.; Garillon, B.; Gevorgyan, N.; Ghandilyan, Y.; Gilfoyle, G. P.; Giovanetti, K. L.; Girod, F. X.; Goetz, J. T.; Golovatch, E.; Gothe, R. W.; Griffioen, K. A.; Guidal, M.; Guo, L.; Hafidi, K.; Hakobyan, H.; Hattawy, M.; Hicks, K.; Ho, D.; Holtrop, M.; Hughes, S. M.; Ilieva, Y.; Ireland, D. G.; Ishkhanov, B. S.; Jenkins, D.; Jiang, H.; Jo, H. S.; Joo, K.; Keller, D.; Khandaker, M.; Kim, W.; Klein, F. J.; Koirala, S.; Kubarovsky, V.; Kuhn, S. E.; Kuleshov, S. V.; Lenisa, P.; Levine, W. I.; Livingston, K.; MacGregor, I. J. D.; Mayer, M.; McKinnon, B.; Meyer, C. A.; Mestayer, M. D.; Mirazita, M.; Mokeev, V.; Moody, C. I.; Moutarde, H.; Movsisyan, A.; Munevar, E.; Munoz Camacho, C.; Nadel-Turonski, P.; Niccolai, S.; Niculescu, G.; Osipenko, M.; Pappalardo, L. L.; Paremuzyan, R.; Pasyuk, E.; Peng, P.; Phelps, W.; Phillips, J. J.; Pisano, S.; Pogorelko, O.; Pozdniakov, S.; Price, J. W.; Procureur, S.; Protopopescu, D.; Rimal, D.; Ripani, M.; Rizzo, A.; Sabatié, F.; Salgado, C.; Schott, D.; Schumacher, R. A.; Simonyan, A.; Smith, G. D.; Sober, D. I.; Sokhan, D.; Stepanyan, S. S.; Stepanyan, S.; Strakovsky, I. I.; Strauch, S.; Sytnik, V.; Tang, W.; Ungaro, M.; Vlassov, A. V.; Voskanyan, H.; Voutier, E.; Walford, N. K.; Watts, D. P.; Wei, X.; Weinstein, L. B.; Zachariou, N.; Zana, L.; Zhang, J.; Zonta, I.; CLAS Collaboration

2014-09-01

We have measured. the induced polarization of the Λ(1116) in the reaction ep →e'K+Λ, detecting the scattered e' and K+ in the final state along with the proton from the decay Λ →pπ-. The present study used the CEBAF Large Acceptance Spectrometer (CLAS), which allowed for a large kinematic acceptance in invariant energy W (1.6≤W≤2.7 GeV) and covered the full range of the kaon production angle at an average momentum transfer Q2=1.90GeV2. In this experiment a 5.50-GeV electron beam was incident upon an unpolarized liquid-hydrogen target. We have mapped out the W and kaon production angle dependencies of the induced polarization and found striking differences from photoproduction data over most of the kinematic range studied. However, we also found that the induced polarization is essentially Q2 independent in our kinematic domain, suggesting that somewhere below the Q2 covered here there must be a strong Q2 dependence. Along with previously published photo- and electroproduction cross sections and polarization observables, these data are needed for the development of models, such as effective field theories, and as input to coupled-channel analyses that can provide evidence of previously unobserved s-channel resonances.

Polarized nuclear target based on parahydrogen induced polarization

OpenAIRE

Budker, D.; Ledbetter, M. P.; Appelt, S.; Bouchard, L. S.; Wojtsekhowski, B.

2012-01-01

We discuss a novel concept of a polarized nuclear target for accelerator fixed-target scattering experiments, which is based on parahydrogen induced polarization (PHIP). One may be able to reach a 33% free-proton polarization in the ethane molecule. The potential advantages of such a target include operation at zero magnetic field, fast ($\\sim$100 Hz) polarization reversal, and operation with large intensity of an electron beam.

Polarized proton and deuteron solid HD targets

International Nuclear Information System (INIS)

Honig, A.

1977-01-01

A decade has now elapsed since HD was proposed as a polarized proton and deuteron target with exceptionally desirable properties. These include a very high free proton proportion, independently polarizable proton and deuteron systems, and a ''frozen-spin'' mode of operation which allows separation of the functions of production and utilization of the highly polarized target. A discussion is given of what can be expected of the polarized HD system right now, without further research. The basic features of solid HD pertinent to its use as a ''frozen-spin'' target are outlined, then a summary is given of the particular experimental results which support the contention that the target will perform successfully, and finally, some feasible operating modes and the expected performances from them are presented

Dynamics of plc gene transcription and α-toxin production during growth of Clostridium perfringens strains with contrasting α-toxin production

DEFF Research Database (Denmark)

Abildgaard, Lone; Schramm, Andreas; Rudi, Knut

2009-01-01

The aim of the present study was to investigate transcription dynamics of the α-toxin-encoding plc gene relative to two housekeeping genes (gyrA and rplL) in batch cultures of three Clostridium perfringens strains with low, intermediate, and high levels of α-toxin production, respectively. The plc...... transcript level was always low in the low α-toxin producing strain. For the two other strains, plc transcription showed an inducible pattern and reached a maximum level in the late exponential growth phase. The transcription levels were however inversely correlated to α-toxin production for the two strains....... We propose that this discrepancy is due to differences in plc translation rates between the strains and that strain-specific translational rates therefore must be determined before α-toxin production can be extrapolated from transcript levels in C. perfringens....

Pleiotropic regulatory genes bldA, adpA and absB are implicated in production of phosphoglycolipid antibiotic moenomycin.

Science.gov (United States)

Makitrynskyy, Roman; Ostash, Bohdan; Tsypik, Olga; Rebets, Yuriy; Doud, Emma; Meredith, Timothy; Luzhetskyy, Andriy; Bechthold, Andreas; Walker, Suzanne; Fedorenko, Victor

2013-10-23

Unlike the majority of actinomycete secondary metabolic pathways, the biosynthesis of peptidoglycan glycosyltransferase inhibitor moenomycin in Streptomyces ghanaensis does not involve any cluster-situated regulators (CSRs). This raises questions about the regulatory signals that initiate and sustain moenomycin production. We now show that three pleiotropic regulatory genes for Streptomyces morphogenesis and antibiotic production-bldA, adpA and absB-exert multi-layered control over moenomycin biosynthesis in native and heterologous producers. The bldA gene for tRNA(Leu)UAA is required for the translation of rare UUA codons within two key moenomycin biosynthetic genes (moe), moeO5 and moeE5. It also indirectly influences moenomycin production by controlling the translation of the UUA-containing adpA and, probably, other as-yet-unknown repressor gene(s). AdpA binds key moe promoters and activates them. Furthermore, AdpA interacts with the bldA promoter, thus impacting translation of bldA-dependent mRNAs-that of adpA and several moe genes. Both adpA expression and moenomycin production are increased in an absB-deficient background, most probably because AbsB normally limits adpA mRNA abundance through ribonucleolytic cleavage. Our work highlights an underappreciated strategy for secondary metabolism regulation, in which the interaction between structural genes and pleiotropic regulators is not mediated by CSRs. This strategy might be relevant for a growing number of CSR-free gene clusters unearthed during actinomycete genome mining.

Invariant polar bear habitat selection during a period of sea ice loss.

Science.gov (United States)

Wilson, Ryan R; Regehr, Eric V; Rode, Karyn D; St Martin, Michelle

2016-08-17

Climate change is expected to alter many species' habitat. A species' ability to adjust to these changes is partially determined by their ability to adjust habitat selection preferences to new environmental conditions. Sea ice loss has forced polar bears (Ursus maritimus) to spend longer periods annually over less productive waters, which may be a primary driver of population declines. A negative population response to greater time spent over less productive water implies, however, that prey are not also shifting their space use in response to sea ice loss. We show that polar bear habitat selection in the Chukchi Sea has not changed between periods before and after significant sea ice loss, leading to a 75% reduction of highly selected habitat in summer. Summer was the only period with loss of highly selected habitat, supporting the contention that summer will be a critical period for polar bears as sea ice loss continues. Our results indicate that bears are either unable to shift selection patterns to reflect new prey use patterns or that there has not been a shift towards polar basin waters becoming more productive for prey. Continued sea ice loss is likely to further reduce habitat with population-level consequences for polar bears. © 2016 The Author(s).

Invariant polar bear habitat selection during a period of sea ice loss

Science.gov (United States)

Wilson, Ryan R.; Regehr, Eric V.; Rode, Karyn D.; St Martin, Michelle

2016-01-01

Climate change is expected to alter many species' habitat. A species' ability to adjust to these changes is partially determined by their ability to adjust habitat selection preferences to new environmental conditions. Sea ice loss has forced polar bears (Ursus maritimus) to spend longer periods annually over less productive waters, which may be a primary driver of population declines. A negative population response to greater time spent over less productive water implies, however, that prey are not also shifting their space use in response to sea ice loss. We show that polar bear habitat selection in the Chukchi Sea has not changed between periods before and after significant sea ice loss, leading to a 75% reduction of highly selected habitat in summer. Summer was the only period with loss of highly selected habitat, supporting the contention that summer will be a critical period for polar bears as sea ice loss continues. Our results indicate that bears are either unable to shift selection patterns to reflect new prey use patterns or that there has not been a shift towards polar basin waters becoming more productive for prey. Continued sea ice loss is likely to further reduce habitat with population-level consequences for polar bears.

Extraction of microalgal lipids and the influence of polar lipids on biodiesel production by lipase-catalyzed transesterification.

Science.gov (United States)

Navarro López, Elvira; Robles Medina, Alfonso; González Moreno, Pedro Antonio; Esteban Cerdán, Luis; Molina Grima, Emilio

2016-09-01

In order to obtain microalgal saponifiable lipids (SLs) fractions containing different polar lipid (glycolipids and phospholipids) contents, SLs were extracted from wet Nannochloropsis gaditana microalgal biomass using seven extraction systems, and the polar lipid contents of some fractions were reduced by low temperature acetone crystallization. We observed that the polar lipid content in the extracted lipids depended on the polarity of the first solvent used in the extraction system. Lipid fractions with polar lipid contents between 75.1% and 15.3% were obtained. Some of these fractions were transformed into fatty acid methyl esters (FAMEs, biodiesel) by methanolysis, catalyzed by the lipases Novozym 435 and Rhizopus oryzae in tert-butanol medium. We observed that the reaction velocity was higher the lower the polar lipid content, and that the final FAME conversions achieved after using the same lipase batch to catalyze consecutive reactions decreased in relation to an increase in the polar lipid content. Copyright © 2016 Elsevier Ltd. All rights reserved.

Measurement of Quarkonium polarization to probe QCD at the LHC

International Nuclear Information System (INIS)

Knünz, V.

2015-01-01

With the first proton-proton collisions in the Large Hadron Collider (LHC) at CERN in 2010, a new era in high energy physics has been initiated. The data collected by the various experiments open up the possibility to study standard model processes with high precision, in new areas of phase space. The LHC provides excellent conditions for studies of quarkonium production, due to the high quarkonium production rates given the high center-of-mass energy and high instantaneous luminosity of the colliding proton beams. Studies of the production of heavy quarkonium mesons - bound states of a heavy quark and its respective antiquark - are very important to improve our understanding of hadron formation. Until quite recently, experimental and phenomenological efforts have not resulted in a satisfactory overall picture of quarkonium production cross sections and quarkonium polarizations. The Compact Muon Solenoid (CMS) detector is ideally suited to study quarkonium production in the experimentally very clean dimuon decay channel, up to considerably higher values of transverse momentum than accessible in previous experiments. The scope of this thesis is to describe in detail the measurements of the polarizations of the Upsilon(nS) bottomonium states and (in less detail) of the Psi(nS) charmonium states, based on a dimuon data sample collected with the CMS detector in proton-proton collisions at a center-of-mass energy of 7 TeV. Surprisingly, no significant polarizations were found in any of the studied quarkonium states, in none of the studied reference frames, nor in a frame-independent analysis. From an experimental point of view, these results, together with recent results from other experiments, clarify the confusing picture originating from previous measurements, which were plagued by experimental ambiguities and inconsistencies. The currently most favored approach to model and understand quarkonium production is non-relativistic quantum chromodynamics (NRQCD), a QCD

Nuclear Dependence of the Transverse-Single-Spin Asymmetry for Forward Neutron Production in Polarized p+A Collisions at sqrt[s_{NN}]=200  GeV.

Science.gov (United States)

Aidala, C; Akiba, Y; Alfred, M; Andrieux, V; Aoki, K; Apadula, N; Asano, H; Ayuso, C; Azmoun, B; Babintsev, V; Bagoly, A; Bandara, N S; Barish, K N; Bathe, S; Bazilevsky, A; Beaumier, M; Belmont, R; Berdnikov, A; Berdnikov, Y; Blau, D S; Boer, M; Bok, J S; Brooks, M L; Bryslawskyj, J; Bumazhnov, V; Butler, C; Campbell, S; Canoa Roman, V; Cervantes, R; Chi, C Y; Chiu, M; Choi, I J; Choi, J B; Citron, Z; Connors, M; Cronin, N; Csanád, M; Csörgő, T; Danley, T W; Daugherity, M S; David, G; DeBlasio, K; Dehmelt, K; Denisov, A; Deshpande, A; Desmond, E J; Dion, A; Dixit, D; Do, J H; Drees, A; Drees, K A; Dumancic, M; Durham, J M; Durum, A; Elder, T; Enokizono, A; En'yo, H; Esumi, S; Fadem, B; Fan, W; Feege, N; Fields, D E; Finger, M; Finger, M; Fokin, S L; Frantz, J E; Franz, A; Frawley, A D; Fukuda, Y; Gal, C; Gallus, P; Garg, P; Ge, H; Giordano, F; Goto, Y; Grau, N; Greene, S V; Grosse Perdekamp, M; Gunji, T; Guragain, H; Hachiya, T; Haggerty, J S; Hahn, K I; Hamagaki, H; Hamilton, H F; Han, S Y; Hanks, J; Hasegawa, S; Haseler, T O S; He, X; Hemmick, T K; Hill, J C; Hill, K; Hollis, R S; Homma, K; Hong, B; Hoshino, T; Hotvedt, N; Huang, J; Huang, S; Imai, K; Imrek, J; Inaba, M; Iordanova, A; Isenhower, D; Ito, Y; Ivanishchev, D; Jacak, B V; Jezghani, M; Ji, Z; Jiang, X; Johnson, B M; Jorjadze, V; Jouan, D; Jumper, D S; Kang, J H; Kapukchyan, D; Karthas, S; Kawall, D; Kazantsev, A V; Khachatryan, V; Khanzadeev, A; Kim, C; Kim, D J; Kim, E-J; Kim, M; Kim, M H; Kincses, D; Kistenev, E; Klatsky, J; Kline, P; Koblesky, T; Kotov, D; Kudo, S; Kurita, K; Kwon, Y; Lajoie, J G; Lallow, E O; Lebedev, A; Lee, S; Leitch, M J; Leung, Y H; Lewis, N A; Li, X; Lim, S H; Liu, L D; Liu, M X; Loggins, V-R; Lökös, S; Lovasz, K; Lynch, D; Majoros, T; Makdisi, Y I; Makek, M; Malaev, M; Manko, V I; Mannel, E; Masuda, H; McCumber, M; McGaughey, P L; McGlinchey, D; McKinney, C; Mendoza, M; Metzger, W J; Mignerey, A C; Mihalik, D E; Milov, A; Mishra, D K; Mitchell, J T; Mitsuka, G; Miyasaka, S; Mizuno, S; Montuenga, P; Moon, T; Morrison, D P; Morrow, S I M; Murakami, T; Murata, J; Nagai, K; Nagashima, K; Nagashima, T; Nagle, J L; Nagy, M I; Nakagawa, I; Nakagomi, H; Nakano, K; Nattrass, C; Niida, T; Nouicer, R; Novák, T; Novitzky, N; Novotny, R; Nyanin, A S; O'Brien, E; Ogilvie, C A; Orjuela Koop, J D; Osborn, J D; Oskarsson, A; Ottino, G J; Ozawa, K; Pantuev, V; Papavassiliou, V; Park, J S; Park, S; Pate, S F; Patel, M; Peng, W; Perepelitsa, D V; Perera, G D N; Peressounko, D Yu; PerezLara, C E; Perry, J; Petti, R; Phipps, M; Pinkenburg, C; Pisani, R P; Pun, A; Purschke, M L; Radzevich, P V; Read, K F; Reynolds, D; Riabov, V; Riabov, Y; Richford, D; Rinn, T; Rolnick, S D; Rosati, M; Rowan, Z; Runchey, J; Safonov, A S; Sakaguchi, T; Sako, H; Samsonov, V; Sarsour, M; Sato, K; Sato, S; Schaefer, B; Schmoll, B K; Sedgwick, K; Seidl, R; Sen, A; Seto, R; Sexton, A; Sharma, D; Shein, I; Shibata, T-A; Shigaki, K; Shimomura, M; Shioya, T; Shukla, P; Sickles, A; Silva, C L; Silvermyr, D; Singh, B K; Singh, C P; Singh, V; Skoby, M J; Slunečka, M; Smith, K L; Snowball, M; Soltz, R A; Sondheim, W E; Sorensen, S P; Sourikova, I V; Stankus, P W; Stoll, S P; Sugitate, T; Sukhanov, A; Sumita, T; Sun, J; Syed, S; Sziklai, J; Takeda, A; Tanida, K; Tannenbaum, M J; Tarafdar, S; Taranenko, A; Tarnai, G; Tieulent, R; Timilsina, A; Todoroki, T; Tomášek, M; Towell, C L; Towell, R S; Tserruya, I; Ueda, Y; Ujvari, B; van Hecke, H W; Vazquez-Carson, S; Velkovska, J; Virius, M; Vrba, V; Vukman, N; Wang, X R; Wang, Z; Watanabe, Y; Watanabe, Y S; Wong, C P; Woody, C L; Xu, C; Xu, Q; Xue, L; Yalcin, S; Yamaguchi, Y L; Yamamoto, H; Yanovich, A; Yin, P; Yoo, J H; Yoon, I; Yu, H; Yushmanov, I E; Zajc, W A; Zelenski, A; Zharko, S; Zou, L

2018-01-12

During 2015, the Relativistic Heavy Ion Collider (RHIC) provided collisions of transversely polarized protons with Au and Al nuclei for the first time, enabling the exploration of transverse-single-spin asymmetries with heavy nuclei. Large single-spin asymmetries in very forward neutron production have been previously observed in transversely polarized p+p collisions at RHIC, and the existing theoretical framework that was successful in describing the single-spin asymmetry in p+p collisions predicts only a moderate atomic-mass-number (A) dependence. In contrast, the asymmetries observed at RHIC in p+A collisions showed a surprisingly strong A dependence in inclusive forward neutron production. The observed asymmetry in p+Al collisions is much smaller, while the asymmetry in p+Au collisions is a factor of 3 larger in absolute value and of opposite sign. The interplay of different neutron production mechanisms is discussed as a possible explanation of the observed A dependence.

Cytotoxic activity of different polarity fractions obtained from methanolic extracts of Vismia baccifera and Vismia macrophylla (Hypericaceae collected in Venezuela

Directory of Open Access Journals (Sweden)

Janne del C. Rojas

2017-10-01

Full Text Available Context: Cancer is a complex disease involving numerous changes in cell physiology and abnormal cell growth, which lead to malignant tumors. Many investigations are still carrying on in different areas including, natural products, to find a possible break point to this pathology. Aims: To evaluate the cytotoxic activity on different polar extracts from Vismia baccifera and Vismia macrophylla collected in two locations of the Venezuelan Andes. Methods: Cytotoxic activity assay was carried out following the colorimetric (3-[4,5-dimethylthiazol-2-yl]-2,5-diphenyl tetrazolium bromide MTT assay. Human tumor cell Lines from breast carcinoma without gene over-expression (MCF-7, breast carcinoma with overexpressed gene (SKBr3, prostate carcinoma (PC3 and cervix epithelial carcinoma (HeLa were tested with different polarity solvent extracts (hexane, dichloromethane, ethyl acetate, butanol, water from the two species under investigation. Human dermis fibroblasts were used as control cells. Mean inhibitory concentration (IC50 was calculated. Results: Extracts from V. macrophylla showed significant inhibition of cervix epithelial carcinoma with values ranging from 6.09 µg/mL to 17.51 µg/mL; breast carcinoma with an overexpressed gene with values from 12.14 µg/mL to 16.90 µg/mL and prostate carcinoma from 10.91 µg/mL to 17.70 µg/mL. V. baccifera extracts showed the strongest activity against prostate carcinoma with an IC50 value of 2.92 µg/mL. Conclusions: The present study showed evidence for the anticancer activity of Vismia baccifera and Vismia macrophylla extracts since caused growth inhibition in different cell lines at low concentrations, thus, it is considered not only an important contribution to the natural products research but bring supportive data for further investigations on cancer research.

Muon polarization in the MEG experiment: predictions and measurements

Energy Technology Data Exchange (ETDEWEB)

Baldini, A.M.; Dussoni, S.; Galli, L.; Grassi, M.; Sergiampietri, F.; Signorelli, G. [Pisa Univ. (Italy); INFN Sezione di Pisa, Pisa (Italy); Bao, Y.; Hildebrandt, M.; Kettle, P.R.; Mtchedlishvili, A.; Papa, A.; Ritt, S. [Paul Scherrer Institut PSI, Villigen (Switzerland); Baracchini, E. [University of Tokyo, ICEPP, Tokyo (Japan); INFN, Laboratori Nazionali di Frascati, Rome (Italy); Bemporad, C.; Cei, F.; D' Onofrio, A.; Nicolo, D.; Tenchini, F. [INFN Sezione di Pisa, Pisa (Italy); Pisa Univ., Dipartimento di Fisica, Pisa (Italy); Berg, F.; Hodge, Z.; Rutar, G. [Paul Scherrer Institut PSI, Villigen (Switzerland); Swiss Federal Institute of Technology ETH, Zurich (Switzerland); Biasotti, M.; Gatti, F.; Pizzigoni, G. [INFN Sezione di Genova, Genova (Italy); Genova Univ., Dipartimento di Fisica, Genova (Italy); Boca, G.; De Bari, A. [INFN Sezione di Pavia, Pavia (Italy); Pavia Univ., Dipartimento di Fisica, Pavia (Italy); Cattaneo, P.W.; Rossella, M. [Pavia Univ. (Italy); INFN Sezione di Pavia, Pavia (Italy); Cavoto, G.; Piredda, G.; Renga, F.; Voena, C. [Univ. ' ' Sapienza' ' , Rome (Italy); INFN Sezione di Roma, Rome (Italy); Chiarello, G.; Panareo, M.; Pepino, A. [INFN Sezione di Lecce, Lecce (Italy); Univ. del Salento, Dipartimento di Matematica e Fisica, Lecce (Italy); Chiri, C.; Grancagnolo, F.; Tassielli, G.F. [Univ. del Salento (Italy); INFN Sezione di Lecce, Lecce (Italy); De Gerone, M. [Genova Univ. (Italy); INFN Sezione di Genova, Genova (Italy); Fujii, Y.; Iwamoto, T.; Kaneko, D.; Mori, Toshinori; Nakaura, S.; Nishimura, M.; Ogawa, S.; Ootani, W.; Sawada, R.; Uchiyama, Y.; Yoshida, K. [University of Tokyo, ICEPP, Tokyo (Japan); Graziosi, A.; Ripiccini, E. [INFN Sezione di Roma, Rome (Italy); Univ. ' ' Sapienza' ' , Dipartimento di Fisica, Rome (Italy); Grigoriev, D.N. [Budker Institute of Nuclear Physics of Siberian Branch of Russian Academy of Sciences, Novosibirsk (Russian Federation); Novosibirsk State Technical University, Novosibirsk (Russian Federation); Novosibirsk State University, Novosibirsk (Russian Federation); Haruyama, T.; Mihara, S.; Nishiguchi, H.; Yamamoto, A. [KEK, High Energy Accelerator Research Organization, Tsukuba, Ibaraki (Japan); Ieki, K. [Paul Scherrer Institut PSI, Villigen (Switzerland); University of Tokyo, ICEPP, Tokyo (Japan); Ignatov, F.; Khazin, B.I.; Popov, A.; Yudin, Yu.V. [Budker Institute of Nuclear Physics of Siberian Branch of Russian Academy of Sciences, Novosibirsk (Russian Federation); Novosibirsk State University, Novosibirsk (Russian Federation); Kang, T.I.; Lim, G.M.A.; Molzon, W.; You, Z. [University of California, Irvine, CA (United States); Khomutov, N.; Korenchenko, A.; Kravchuk, N. [Joint Institute for Nuclear Research, Dubna (Russian Federation); Venturini, M. [Pisa Univ. (Italy); INFN Sezione di Pisa, Pisa (Italy); Scuola Normale Superiore, Pisa (Italy); Collaboration: The MEG Collaboration

2016-04-15

The MEG experiment makes use of one of the world's most intense low energy muon beams, in order to search for the lepton flavour violating process μ{sup +} → e{sup +}γ. We determined the residual beam polarization at the thin stopping target, by measuring the asymmetry of the angular distribution of Michel decay positrons as a function of energy. The initial muon beam polarization at the production is predicted to be P{sub μ} = -1 by the Standard Model (SM) with massless neutrinos. We estimated our residual muon polarization to be P{sub μ} =.0.86 ± 0.02 (stat){sub -0.06}{sup +0.05} (syst) at the stopping target, which is consistent with the SM predictions when the depolarizing effects occurring during the muon production, propagation and moderation in the target are taken into account. The knowledge of beam polarization is of fundamental importance in order to model the background of our μ{sup +} → e{sup +}γ search induced by the muon radiative decay: μ{sup +} → e{sup +} anti ν{sub μ}ν{sub e}γ. (orig.)

NLO QCD result for the gluon polarization from open charm $D^{0}$ meson production at COMPASS

CERN Document Server

Kurek, Krzysztof

2011-01-01

One of the main goals of the COMPASS experiment is the measurement of the gluon contribution to the nucleon spin. Among the processes studied by COMPASS, open- charm $D^{0}$ meson production seems to be the cleanest channel for probing gluons in the energy range covered by the experiment. The gluon polarisation is related to the measured asymmetry for charmed mesons production via the analyzing power (asymmetry at the partonic level) calculated in the perturbative QCD frame. The analyzing power for the "photon-gluon fusion" process corresponds to a LO QCD approximation. The signicant improvement of the statistical precision and the new, nal LO result are presented . The NLO QCD corrections to the partonic cross sections (unpolarised and polarized ones) are now also included into the analysis scheme since these higher order contributions are not negligible. The preliminary NLO QCD result on the gluon polarisation based on a set of measured $D^{0}$ meson asymmetries in kinematical bins of the $D^{0}$ energy amd...

Fusion of a polarized projectile with a polarized target

International Nuclear Information System (INIS)

Christley, J.A.; Johnson, R.C.; Thompson, I.J.

1995-01-01

The fusion cross sections for a polarized target with both unpolarized and polarized projectiles are studied. Expressions for the observables are given for the case when both nuclei are polarized. Calculations for fusion of an aligned 165 Ho target with 16 O and polarized 7 Li beams are presented

Realization of beam polarization at the linear collider and its application to EW processes

Energy Technology Data Exchange (ETDEWEB)

Franco-Sollova, F.

2006-07-15

The use of beam polarization at the future ILC e{sup +}e{sup -} linear collider will benefit the physics program significantly. This thesis explores three aspects of beam polarization: the application of beam polarization to the study of electroweak processes, the precise measurement of the beam polarization, and finally, the production of polarized positrons at a test beam experiment. In the first part of the thesis the importance of beam polarization at the future ILC is exhibited: the benefits of employing transverse beam polarization (in both beams) for the measurement of triple gauge boson couplings (TGCs) in the W-pair production process are studied. The sensitivity to anomalous TGC values is compared for the cases of transverse and longitudinal beam polarization at a center of mass energy of 500 GeV. Due to the suppressed contribution of the t-channel {nu} exchange, the sensitivity is higher for longitudinal polarization. For some physics analyses the usual polarimetry techniques do not provide the required accuracy for the measurement of the beam polarization (around 0.25% with Compton polarimetry). The second part of the thesis deals with a complementary method to measure the beam polarization employing physics data acquired with two polarization modes. The process of single-W production is chosen due to its high cross section. The expected precision for 500 fb{sup -1} and W{yields}{mu}{nu} decays only, is {delta}P{sub e{sup -}}/P{sub e{sup -}}=0.26% and {delta}P{sub e{sup +}}/P{sub e{sup +}}=0.33%, which can be further improved by employing additional W-decay channels. The first results of an attempt to produce polarized positrons at the E-166 experiment are shown in the last part of the thesis. The E-166 experiment, located at the Final Focus Test Beam at SLAC's LINAC employs a helical undulator to induce the emission of circularly polarized gamma rays by the beam electrons. These gamma rays are converted into longitudinally polarized electron

CD5L Promotes M2 Macrophage Polarization through Autophagy-Mediated Upregulation of ID3

Directory of Open Access Journals (Sweden)

Lucía Sanjurjo

2018-03-01

Full Text Available CD5L (CD5 molecule-like is a secreted glycoprotein that controls key mechanisms in inflammatory responses, with involvement in processes such as infection, atherosclerosis, and cancer. In macrophages, CD5L promotes an anti-inflammatory cytokine profile in response to TLR activation. In the present study, we questioned whether CD5L is able to influence human macrophage plasticity, and drive its polarization toward any specific phenotype. We compared CD5L-induced phenotypic and functional changes to those caused by IFN/LPS, IL4, and IL10 in human monocytes. Phenotypic markers were quantified by RT-qPCR and flow cytometry, and a mathematical algorithm was built for their analysis. Moreover, we compared ROS production, phagocytic capacity, and inflammatory responses to LPS. CD5L drove cells toward a polarization similar to that induced by IL10. Furthermore, IL10- and CD5L-treated macrophages showed increased LC3-II content and colocalization with acidic compartments, thereby pointing to the enhancement of autophagy-dependent processes. Accordingly, siRNA targeting ATG7 in THP1 cells blocked CD5L-induced CD163 and Mer tyrosine kinase mRNA and efferocytosis. In these cells, gene expression profiling and validation indicated the upregulation of the transcription factor ID3 by CD5L through ATG7. In agreement, ID3 silencing reversed polarization by CD5L. Our data point to a significant contribution of CD5L-mediated autophagy to the induction of ID3 and provide the first evidence that CD5L drives macrophage polarization.

Gene Disruption Technologies Have the Potential to Transform Stored Product Insect Pest Control.

Science.gov (United States)

Perkin, Lindsey C; Adrianos, Sherry L; Oppert, Brenda

2016-09-19

Stored product insects feed on grains and processed commodities manufactured from grain post-harvest, reducing the nutritional value and contaminating food. Currently, the main defense against stored product insect pests is the pesticide fumigant phosphine. Phosphine is highly toxic to all animals, but is the most effective and economical control method, and thus is used extensively worldwide. However, many insect populations have become resistant to phosphine, in some cases to very high levels. New, environmentally benign and more effective control strategies are needed for stored product pests. RNA interference (RNAi) may overcome pesticide resistance by targeting the expression of genes that contribute to resistance in insects. Most data on RNAi in stored product insects is from the coleopteran genetic model, Tribolium castaneum, since it has a strong RNAi response via injection of double stranded RNA (dsRNA) in any life stage. Additionally, Clustered Regularly Interspaced Short Palindromic Repeats (CRISPR) technology has been suggested as a potential resource for new pest control strategies. In this review we discuss background information on both gene disruption technologies and summarize the advances made in terms of molecular pest management in stored product insects, mainly T. castaneum, as well as complications and future needs.

Bayesian Computational Approaches for Gene Regulation Studies of Bioethanol and Biohydrogen Production. Final Scientific/Technical Report

Energy Technology Data Exchange (ETDEWEB)

Newberg, Lee; McCue, Lee Anne; Van Roey, Patrick

2014-04-17

The project developed mathematical models and first-version software tools for the understanding of gene regulation across multiple related species. The project lays the foundation for understanding how certain alpha-proteobacterial species control their own genes for bioethanol and biohydrogen production, and sets the stage for exploiting bacteria for the production of fuels. Enabling such alternative sources of fuel is a high priority for the Department of Energy and the public.

An assessment of ten ocean reanalyses in the polar regions

Science.gov (United States)

Uotila, Petteri

2017-04-01

Ocean reanalysis (ORA) combines observations either statistically or with a hydrodynamical model, to reconstruct historical changes in the ocean. Global and regional ORA products are increasingly used in polar research, but their quality remains to be systematically assessed. To address this, the Polar ORA Intercomparison Project (PORA-IP) has been established following on from the ORA-IP project (Balmaseda et al. 2015, with other papers in a special issue of Climate Dynamics). The PORA-IP is constituted under the COST EOS initiative with plans to review reanalyses products in both the Arctic and Antarctic, and is endorsed by YOPP - the Year of Polar Prediction project. Currently, the PORA-IP team consists of 21 researchers from 15 institutes and universities. The ORA-IP products with polar physics, such as sea ice, have been updated where necessary and collected in a public database. In addition to model output, available observational polar climatologies are collected and used in the assessments. Due to the extensive variety of products, this database should become a valuable resource outside the PORA-IP community. For a comprehensive evaluation of the ten ORA products (CGLORSv5, ECDA3.1, GECCO2, Glorys2v4, GloSea5_GO5, MOVEG2i, ORAP5, SODA3.3.1, TOPAZ4 and UR025.4) in the Arctic and Southern Oceans several specific diagnostics are assessed. The PORA-IP diagnostics target the following topics: hydrography; heat, salinity and freshwater content; ocean transports and surface currents; mixed layer depth; sea-ice concentration and thickness; and snow thickness over sea ice. Based on these diagnostics, ORA product biases against observed data and their mutual spread are quantified, and possible reasons for discrepancies discussed. So far, we have identified product outliers and evaluated the multi-model mean. We have identified the importance of the atmospheric forcing, air-ocean coupling protocol and sea-ice data assimilation for the product performance. Moreover, we

Recent results of the STAR high-energy polarized proton-proton program at RHIC at BNL

International Nuclear Information System (INIS)

Surrow, Bernd

2007-01-01

The STAR experiment at the Relativistic Heavy-Ion Collider (RHIC) at Brookhaven National Laboratory (BNL) is carrying out a spin physics program colliding transverse or longitudinal polarized proton beams at √(s) 200 - 500GeV to gain a deeper insight into the spin structure and dynamics of the proton. These studies provide fundamental tests of Quantum Chromodynamics (QCD).One of the main objectives of the STAR spin physics program is the determination of the polarized gluon distribution function through a measurement of the longitudinal double-spin asymmetry, ALL, for various processes. Recent results will be shown on the measurement of ALL for inclusive jet production, neutral pion production and charged pion production at √(s) = 200GeV. In addition to these measurements involving longitudinal polarized proton beams, the STAR collaboration has performed several important measurements employing transverse polarized proton beams. New results on the measurement of the transverse single-spin asymmetry, AN, for forward neutral pion production and the first measurement of AN for mid-rapidity di-jet production will be discussed

Update of the Polar SWIFT model for polar stratospheric ozone loss (Polar SWIFT version 2)

Science.gov (United States)

Wohltmann, Ingo; Lehmann, Ralph; Rex, Markus

2017-07-01

The Polar SWIFT model is a fast scheme for calculating the chemistry of stratospheric ozone depletion in polar winter. It is intended for use in global climate models (GCMs) and Earth system models (ESMs) to enable the simulation of mutual interactions between the ozone layer and climate. To date, climate models often use prescribed ozone fields, since a full stratospheric chemistry scheme is computationally very expensive. Polar SWIFT is based on a set of coupled differential equations, which simulate the polar vortex-averaged mixing ratios of the key species involved in polar ozone depletion on a given vertical level. These species are O3, chemically active chlorine (ClOx), HCl, ClONO2 and HNO3. The only external input parameters that drive the model are the fraction of the polar vortex in sunlight and the fraction of the polar vortex below the temperatures necessary for the formation of polar stratospheric clouds. Here, we present an update of the Polar SWIFT model introducing several improvements over the original model formulation. In particular, the model is now trained on vortex-averaged reaction rates of the ATLAS Chemistry and Transport Model, which enables a detailed look at individual processes and an independent validation of the different parameterizations contained in the differential equations. The training of the original Polar SWIFT model was based on fitting complete model runs to satellite observations and did not allow for this. A revised formulation of the system of differential equations is developed, which closely fits vortex-averaged reaction rates from ATLAS that represent the main chemical processes influencing ozone. In addition, a parameterization for the HNO3 change by denitrification is included. The rates of change of the concentrations of the chemical species of the Polar SWIFT model are purely chemical rates of change in the new version, whereas in the original Polar SWIFT model, they included a transport effect caused by the

The International Polar Year in Portugal: A New National Polar Programme and a Major Education and Outreach project

Science.gov (United States)

Mendes-Victor, L.; Vieira, G.; Xavier, J.; Canario, A.

2008-12-01

Portuguese society. Hundreds of events were organized, with activities lead by polar scientists and by about 400 teachers and thousands of students that got deeply involved in the IPY. The main activities were: the scientists go to school initiative, a national contest with over 8,000 participants that lead to a major exhibition and to the participation of 7 students in the Students on Ice Antarctic Expedition, an educational theatre play for kids presented n tens of schools, an IPY exhibition in the major shopping centers, public talks by scientists, production of educational materials (websites, a polar portal, on-line educational games, DVDs and class-oriented material), field stages with polar scientists, and the Polar Science Weekend with an attendance of over 7,000 people.

What can we learn from unpolarized and polarized electroproduction of fast baryons

International Nuclear Information System (INIS)

Artru, X.

1991-01-01

Two applications of semi-inclusive electroproduction of fast baryons are presented: (i) The steepness of the baryon spectrum at medium rapidity can give information about the general mechanisms of baryon production in soft and hard processes. (ii) With a polarized target and a detector which analyses the polarization of final Λ's, the aptitude of quarks to carry transverse polarization can be tested for the first time

Glutamic acid promotes monacolin K production and monacolin K biosynthetic gene cluster expression in Monascus.

Science.gov (United States)

Zhang, Chan; Liang, Jian; Yang, Le; Chai, Shiyuan; Zhang, Chenxi; Sun, Baoguo; Wang, Chengtao

2017-12-01

This study investigated the effects of glutamic acid on production of monacolin K and expression of the monacolin K biosynthetic gene cluster. When Monascus M1 was grown in glutamic medium instead of in the original medium, monacolin K production increased from 48.4 to 215.4 mg l -1 , monacolin K production increased by 3.5 times. Glutamic acid enhanced monacolin K production by upregulating the expression of mokB-mokI; on day 8, the expression level of mokA tended to decrease by Reverse Transcription-polymerase Chain Reaction. Our findings demonstrated that mokA was not a key gene responsible for the quantity of monacolin K production in the presence of glutamic acid. Observation of Monascus mycelium morphology using Scanning Electron Microscope showed glutamic acid significantly increased the content of Monascus mycelium, altered the permeability of Monascus mycelium, enhanced secretion of monacolin K from the cell, and reduced the monacolin K content in Monascus mycelium, thereby enhancing monacolin K production.

Measurement of top quark polarization in top-antitop lepton+jets final states at DØ

Energy Technology Data Exchange (ETDEWEB)

Augsten, Kamil [Czech Technical Univ., Prague (Czech Republic)

2017-01-01

This thesis presents a measurement of the top quark polarization in the $t\\overline{t}$ events produced in $p\\overline{p}$ collisions at $\\sqrt{s}=1.96$ TeV using data corresponding to 9.7 fb$^{-1}$ of integrated luminosity collected with the D0 detector at the Fermilab Tevatron Collider. The final states used in the measurement contain one lepton and at least three jets. The polarization is measured using the angular distribution of leptons along three different axes: the beam axis, the helicity axis, and the transverse axis normal to the $t\\overline{t}$ production plane. This is the first measurement of top quark polarization at the Tevatron Collider in lepton+jets final states, and the first measurement of transverse polarization in $t\\overline{t}$ production. The polarization along the beam axis is combined with the previous result in the dilepton final states by the D0 experiment. The observed distributions are consistent with the Standard Model of nearly no polarization and no indication for beyond Standard Model physics is observed. The measurement offers legacy result from unique Tevatron Collider data and provides more information about the top quark production and decays, about the properties of the heaviest elementary particle.

Correlation of gene expression and protein production rate - a system wide study

Directory of Open Access Journals (Sweden)

Arvas Mikko

2011-12-01

Full Text Available Abstract Background Growth rate is a major determinant of intracellular function. However its effects can only be properly dissected with technically demanding chemostat cultivations in which it can be controlled. Recent work on Saccharomyces cerevisiae chemostat cultivations provided the first analysis on genome wide effects of growth rate. In this work we study the filamentous fungus Trichoderma reesei (Hypocrea jecorina that is an industrial protein production host known for its exceptional protein secretion capability. Interestingly, it exhibits a low growth rate protein production phenotype. Results We have used transcriptomics and proteomics to study the effect of growth rate and cell density on protein production in chemostat cultivations of T. reesei. Use of chemostat allowed control of growth rate and exact estimation of the extracellular specific protein production rate (SPPR. We find that major biosynthetic activities are all negatively correlated with SPPR. We also find that expression of many genes of secreted proteins and secondary metabolism, as well as various lineage specific, mostly unknown genes are positively correlated with SPPR. Finally, we enumerate possible regulators and regulatory mechanisms, arising from the data, for this response. Conclusions Based on these results it appears that in low growth rate protein production energy is very efficiently used primarly for protein production. Also, we propose that flux through early glycolysis or the TCA cycle is a more fundamental determining factor than growth rate for low growth rate protein production and we propose a novel eukaryotic response to this i.e. the lineage specific response (LSR.

First Regge parameterisation of polarized DIS cross section

International Nuclear Information System (INIS)

Thomas, E.; Bianchi, N.

2000-01-01

The first Regge description of the virtual photon absorption cross section difference Δσ(γ*, N) = [σ 1/2 (γ*,N) - σ ((3)/(2)) (γ*, N)] was obtained from a global fit of all the data collected by the experiments measuring spin asymmetries in polarized lepton - polarized nucleon deep inelastic scattering. This work present a phenomenological and a numerical description of all the polarized deep inelastic data (Δσ(γ*, N), g l spin structure function) on the whole measured kinematical range (0.3 GeV 2 2 2 , 4 GeV 2 2 2 ). The fit also provide reliable predictions for the photo-production limit through a smooth Q 2 -transition

Neutron polarization

International Nuclear Information System (INIS)

Firk, F.W.K.

1976-01-01

Some recent experiments involving polarized neutrons are discussed; they demonstrate how polarization studies provide information on fundamental aspects of nuclear structure that cannot be obtained from more traditional neutron studies. Until recently, neutron polarization studies tended to be limited either to very low energies or to restricted regions at higher energies, determined by the kinematics of favorable (p, vector n) and (d, vector n) reactions. With the advent of high intensity pulsed electron and proton accelerators and of beams of vector polarized deuterons, this is no longer the case. One has entered an era in which neutron polarization experiments are now being carried out, in a routine way, throughout the entire range from thermal energies to tens-of-MeV. The significance of neutron polarization studies is illustrated in discussions of a wide variety of experiments that include the measurement of T-invariance in the β-decay of polarized neutrons, a search for the effects of meson exchange currents in the photo-disintegration of the deuteron, the determination of quantum numbers of states in the fission of aligned 235 U and 237 Np induced by polarized neutrons, and the double- and triple-scattering of fast neutrons by light nuclei

Measurement of the cross section and longitudinal double-spin asymmetry for dijet production in polarized p p collisions at √{s }=200 GeV

Science.gov (United States)

Adamczyk, L.; Adkins, J. K.; Agakishiev, G.; Aggarwal, M. M.; Ahammed, Z.; Ajitanand, N. N.; Alekseev, I.; Anderson, D. M.; Aoyama, R.; Aparin, A.; Arkhipkin, D.; Aschenauer, E. C.; Ashraf, M. U.; Attri, A.; Averichev, G. S.; Bai, X.; Bairathi, V.; Barish, K.; Behera, A.; Bellwied, R.; Bhasin, A.; Bhati, A. K.; Bhattarai, P.; Bielcik, J.; Bielcikova, J.; Bland, L. C.; Bordyuzhin, I. G.; Bouchet, J.; Brandenburg, J. D.; Brandin, A. V.; Brown, D.; Bunzarov, I.; Butterworth, J.; Caines, H.; Calderón de la Barca Sánchez, M.; Campbell, J. M.; Cebra, D.; Chakaberia, I.; Chaloupka, P.; Chang, Z.; Chankova-Bunzarova, N.; Chatterjee, A.; Chattopadhyay, S.; Chen, X.; Chen, X.; Chen, J. H.; Cheng, J.; Cherney, M.; Christie, W.; Contin, G.; Crawford, H. J.; Das, S.; De Silva, L. C.; Debbe, R. R.; Dedovich, T. G.; Deng, J.; Derevschikov, A. A.; Didenko, L.; Dilks, C.; Dong, X.; Drachenberg, J. L.; Draper, J. E.; Dunkelberger, L. E.; Dunlop, J. C.; Efimov, L. G.; Elsey, N.; Engelage, J.; Eppley, G.; Esha, R.; Esumi, S.; Evdokimov, O.; Ewigleben, J.; Eyser, O.; Fatemi, R.; Fazio, S.; Federic, P.; Federicova, P.; Fedorisin, J.; Feng, Z.; Filip, P.; Finch, E.; Fisyak, Y.; Flores, C. E.; Fujita, J.; Fulek, L.; Gagliardi, C. A.; Garand, D.; Geurts, F.; Gibson, A.; Girard, M.; Grosnick, D.; Gunarathne, D. S.; Guo, Y.; Gupta, S.; Gupta, A.; Guryn, W.; Hamad, A. I.; Hamed, A.; Harlenderova, A.; Harris, J. W.; He, L.; Heppelmann, S.; Heppelmann, S.; Hirsch, A.; Hoffmann, G. W.; Horvat, S.; Huang, T.; Huang, B.; Huang, H. Z.; Huang, X.; Humanic, T. J.; Huo, P.; Igo, G.; Jacobs, W. W.; Jentsch, A.; Jia, J.; Jiang, K.; Jowzaee, S.; Judd, E. G.; Kabana, S.; Kalinkin, D.; Kang, K.; Kapukchyan, D.; Kauder, K.; Ke, H. W.; Keane, D.; Kechechyan, A.; Khan, Z.; Kikoła, D. P.; Kim, C.; Kisel, I.; Kisiel, A.; Kochenda, L.; Kocmanek, M.; Kollegger, T.; Kosarzewski, L. K.; Kraishan, A. F.; Krauth, L.; Kravtsov, P.; Krueger, K.; Kulathunga, N.; Kumar, L.; Kvapil, J.; Kwasizur, J. H.; Lacey, R.; Landgraf, J. M.; Landry, K. D.; Lauret, J.; Lebedev, A.; Lednicky, R.; Lee, J. H.; Li, W.; Li, C.; Li, Y.; Li, X.; Lidrych, J.; Lin, T.; Lisa, M. A.; Liu, H.; Liu, F.; Liu, Y.; Liu, P.; Ljubicic, T.; Llope, W. J.; Lomnitz, M.; Longacre, R. S.; Luo, X.; Luo, S.; Ma, R.; Ma, G. L.; Ma, L.; Ma, Y. G.; Magdy, N.; Majka, R.; Mallick, D.; Margetis, S.; Markert, C.; Matis, H. S.; Meehan, K.; Mei, J. C.; Miller, Z. W.; Minaev, N. G.; Mioduszewski, S.; Mishra, D.; Mizuno, S.; Mohanty, B.; Mondal, M. M.; Morozov, D. A.; Mustafa, M. K.; Nasim, Md.; Nayak, T. K.; Nelson, J. M.; Nie, M.; Nigmatkulov, G.; Niida, T.; Nogach, L. V.; Nonaka, T.; Nurushev, S. B.; Odyniec, G.; Ogawa, A.; Oh, K.; Okorokov, V. A.; Olvitt, D.; Page, B. S.; Pak, R.; Pandit, Y.; Panebratsev, Y.; Pawlik, B.; Pei, H.; Perkins, C.; Pile, P.; Pluta, J.; Poniatowska, K.; Porter, J.; Posik, M.; Pruthi, N. K.; Przybycien, M.; Putschke, J.; Qiu, H.; Quintero, A.; Ramachandran, S.; Ray, R. L.; Reed, R.; Rehbein, M. J.; Ritter, H. G.; Roberts, J. B.; Rogachevskiy, O. V.; Romero, J. L.; Roth, J. D.; Ruan, L.; Rusnak, J.; Rusnakova, O.; Sahoo, N. R.; Sahu, P. K.; Salur, S.; Sandweiss, J.; Saur, M.; Schambach, J.; Schmah, A. M.; Schmidke, W. B.; Schmitz, N.; Schweid, B. R.; Seger, J.; Sergeeva, M.; Seto, R.; Seyboth, P.; Shah, N.; Shahaliev, E.; Shanmuganathan, P. V.; Shao, M.; Sharma, A.; Sharma, M. K.; Shen, W. Q.; Shi, S. S.; Shi, Z.; Shou, Q. Y.; Sichtermann, E. P.; Sikora, R.; Simko, M.; Singha, S.; Skoby, M. J.; Smirnov, N.; Smirnov, D.; Solyst, W.; Song, L.; Sorensen, P.; Spinka, H. M.; Srivastava, B.; Stanislaus, T. D. S.; Strikhanov, M.; Stringfellow, B.; Sugiura, T.; Sumbera, M.; Summa, B.; Sun, X.; Sun, X. M.; Sun, Y.; Surrow, B.; Svirida, D. N.; Tang, A. H.; Tang, Z.; Taranenko, A.; Tarnowsky, T.; Tawfik, A.; Thäder, J.; Thomas, J. H.; Timmins, A. R.; Tlusty, D.; Todoroki, T.; Tokarev, M.; Trentalange, S.; Tribble, R. E.; Tribedy, P.; Tripathy, S. K.; Trzeciak, B. A.; Tsai, O. D.; Ullrich, T.; Underwood, D. G.; Upsal, I.; Van Buren, G.; van Nieuwenhuizen, G.; Vasiliev, A. N.; Videbæk, F.; Vokal, S.; Voloshin, S. A.; Vossen, A.; Wang, G.; Wang, Y.; Wang, F.; Wang, Y.; Webb, G.; Webb, J. C.; Wen, L.; Westfall, G. D.; Wieman, H.; Wissink, S. W.; Witt, R.; Wu, Y.; Xiao, Z. G.; Xie, W.; Xie, G.; Xu, Y. F.; Xu, Q. H.; Xu, N.; Xu, Z.; Xu, J.; Yang, Y.; Yang, S.; Yang, C.; Yang, Q.; Ye, Z.; Ye, Z.; Yi, L.; Yip, K.; Yoo, I.-K.; Yu, N.; Zbroszczyk, H.; Zha, W.; Zhang, S.; Zhang, J. B.; Zhang, Y.; Zhang, J.; Zhang, J.; Zhang, S.; Zhang, X. P.; Zhang, Z.; Zhao, J.; Zhong, C.; Zhou, C.; Zhou, L.; Zhu, Z.; Zhu, X.; Zyzak, M.; STAR Collaboration

2017-04-01

We report the first measurement of the longitudinal double-spin asymmetry AL L for midrapidity dijet production in polarized p p collisions at a center-of-mass energy of √{s }=200 GeV . The dijet cross section was measured and is shown to be consistent with next-to-leading order (NLO) perturbative QCD predictions. AL L results are presented for two distinct topologies, defined by the jet pseudorapidities, and are compared to predictions from several recent NLO global analyses. The measured asymmetries, the first such correlation measurements, support those analyses that find positive gluon polarization at the level of roughly 0.2 over the region of Bjorken-x >0.05 .

Three-photon polarization ququarts: polarization, entanglement and Schmidt decompositions

International Nuclear Information System (INIS)

Fedorov, M V; Miklin, N I

2015-01-01

We consider polarization states of three photons, propagating collinearly and having equal given frequencies but with arbitrary distributed horizontal or vertical polarizations of photons. A general form of such states is a superposition of four basic three-photon polarization modes, to be referred to as the three-photon polarization ququarts (TPPQ). All such states can be considered as consisting of one- and two-photon parts, which can be entangled with each other. The degrees of entanglement and polarization, as well as the Schmidt decomposition and Stokes vectors of TPPQ are found and discussed. (paper)

Polarized protons at the AGS

International Nuclear Information System (INIS)

Krisch, A.D.

1981-01-01

Various aspects of the project of modifying the Brookhaven AGS for the production of polarized proton beams are discussed. It is observed that pure spin state cross sections are of great importance in many investigations since differences between spin states are frequently significant. Financial and technical aspects of the modification of the Brookhaven accelerator are also discussed

Polarization splitter and polarization rotator designs based on transformation optics.

Science.gov (United States)

Kwon, Do-Hoon; Werner, Douglas H

2008-11-10

The transformation optics technique is employed in this paper to design two optical devices - a two-dimensional polarization splitter and a three-dimensional polarization rotator for propagating beams. The polarization splitter translates the TM- and the TE-polarized components of an incident beam in opposite directions (i.e., shifted up or shifted down). The polarization rotator rotates the polarization state of an incoming beam by an arbitrary angle. Both optical devices are reflectionless at the entry and exit interfaces. Design details and full-wave simulation results are provided.

Opposite replication polarities of transcribed and nontranscribed histone H5 genes

International Nuclear Information System (INIS)

Trempe, J.P.; Lindstrom, Y.I.; Leffak, M.

1988-01-01

The authors used an in vitro nuclear runoff replication assay to analyze the direction of replication of the active and inactive histone H5 genes in avian cells. In embryonic erythrocytes the transcribed histone H5 gene displayed sensitivity to endogenous nuclease cleavage. In contrast, this gene was insensitive to endogenous nuclease digestion under the same conditions in nuclei of the lymphoblastoid cell line MSB-1, and histone H5 gene transcripts were not detectable by dot-blot analysis of MSB-1 cell RNA. When nuclei were isolated from embryonic erythrocyctes and incubated with bromodeoxyuridine triphosphate, runoff replication from endogenous nuclease cleavage sites led to a relative enrichment for fragments near the 3' end of the histone H5 gene in the density-labeled DNA. In nuclei of MSB-1 cells or chicken embryo fibroblasts, however, runoff replication from restriction enzyme-cut sites (or induced endogenous nuclease-cut sites in MSB-1 nuclei) led to a relative enrichment for fragments near the 5' end of the H5 gene in dense DNA. Based on the enhanced incorporation of bromodeoxyuridine into origin-distal regions of DNA during the in vitro runoff replication assay, the authors conclude that the active histone H5 gene in embryonic erythrocytes is preferentially replicated in the transcriptional direction from an origin in the 5'-flanking DNA, whereas its inactive counterparts in MSB-1 cells and chicken embryo fibroblasts are preferentially replicated in the opposite direction

Study of the exotic Θ+ with polarized photon beams

International Nuclear Information System (INIS)

Zhao Qiang

2004-01-01

We carry out an analysis of the pentaquark Θ + photoproduction with polarized photon beams. Kinematical and dynamical aspects are examined for the purpose of determining Θ + 's spin and parity. It shows that the polarized photon beam asymmetry in association with certain dynamical properties of the production mechanism would provide further information on its quantum numbers. Facilities at SPring-8, JLab, ELSA, and ESRF will have access to them

What can we learn from unpolarized and polarized electroproduction of fast baryons?

International Nuclear Information System (INIS)

Artru, X.; Mekhfi, M.

1991-01-01

Two applications of semi-inclusive electroproduction of fast baryons are presented: (i) The steepness of the baryon spectrum at medium rapidity can give information about the general mechanisms of baryon production in soft and hard processes. (ii) With a polarized target and a detector which analyses the polarization of final Λ's, the aptitude of quarks to carry transverse polarization can be tested for the first time. (orig.)

A positive feedback-based gene circuit to increase the production of a membrane protein

Directory of Open Access Journals (Sweden)

Gennis Robert B

2010-05-01

Full Text Available Abstract Background Membrane proteins are an important class of proteins, playing a key role in many biological processes, and are a promising target in pharmaceutical development. However, membrane proteins are often difficult to produce in large quantities for the purpose of crystallographic or biochemical analyses. Results In this paper, we demonstrate that synthetic gene circuits designed specifically to overexpress certain genes can be applied to manipulate the expression kinetics of a model membrane protein, cytochrome bd quinol oxidase in E. coli, resulting in increased expression rates. The synthetic circuit involved is an engineered, autoinducer-independent variant of the lux operon activator LuxR from V. fischeri in an autoregulatory, positive feedback configuration. Conclusions Our proof-of-concept experiments indicate a statistically significant increase in the rate of production of the bd oxidase membrane protein. Synthetic gene networks provide a feasible solution for the problem of membrane protein production.

Design Studies for Flux and Polarization Measurements of Photons and Positrons for SLAC Proposal E166: An experiment to test polarized positron production in the FFTB (LCC-0107)

Energy Technology Data Exchange (ETDEWEB)

Woods, M

2003-10-02

We present results from design studies carried out to investigate measurements of the flux, spectrum and polarization of undulator photons for SLAC Proposal E166. A transmission Compton polarimeter is considered for measuring the photon circular polarization. We also present results for measuring the flux and spectrum of positrons produced by the undulator photons in an 0.5X{sub 0} Titanium target. And we present some considerations for use of a transmission Compton polarimeter to measure the circular polarization of bremsstrahlung photons emitted by the polarized positrons in a thin radiator.

Isolated elliptically polarized attosecond soft X-ray with high-brilliance using polarization gating of harmonics from relativistic plasmas at oblique incidence.

Science.gov (United States)

Chen, Zi-Yu; Li, Xiao-Ya; Li, Bo-Yuan; Chen, Min; Liu, Feng

2018-02-19

The production of intense isolated attosecond pulse is a major goal in ultrafast research. Recent advances in high harmonic generation from relativistic plasma mirrors under oblique incidence interactions gave rise to photon-rich attosecond pulses with circular or elliptical polarization. However, to achieve an isolated elliptical attosecond pulse via polarization gating using currently available long driving pulses remains a challenge, because polarization gating of high harmonics from relativistic plasmas is assumed only possible at normal or near-normal incidence. Here we numerically demonstrate a scheme around this problem. We show that via control of plasma dynamics by managing laser polarization, it is possible to gate an intense single attosecond pulse with high ellipticity extending to the soft X-ray regime at oblique incidence. This approach thus paves the way towards a powerful tool enabling high-time-resolution probe of dynamics of chiral systems and magnetic materials with current laser technology.

Polarization dynamics and polarization time of random three-dimensional electromagnetic fields

International Nuclear Information System (INIS)

Voipio, Timo; Setaelae, Tero; Shevchenko, Andriy; Friberg, Ari T.

2010-01-01

We investigate the polarization dynamics of random, stationary three-dimensional (3D) electromagnetic fields. For analyzing the time evolution of the instantaneous polarization state, two intensity-normalized polarization autocorrelation functions are introduced, one based on a geometric approach with the Poincare vectors and the other on energy considerations with the Jones vectors. Both approaches lead to the same conclusions on the rate and strength of the polarization dynamics and enable the definition of a polarization time over which the state of polarization remains essentially unchanged. For fields obeying Gaussian statistics, the two correlation functions are shown to be expressible in terms of quantities characterizing partial 3D polarization and electromagnetic coherence. The 3D degree of polarization is found to have the same meaning in the 3D polarization dynamics as the usual two-dimensional (2D) degree of polarization does with planar fields. The formalism is demonstrated with several examples, and it is expected to be useful in applications dealing with polarization fluctuations of 3D light.

Effects of thiamine on growth, aflatoxin production, and aflr gene expression in A. parasiticus

Directory of Open Access Journals (Sweden)

Ladan Nazemi

2015-01-01

Results: The minimum inhibitory concentration was yielded as > 500 mg/ml. However, HPLC analysis results showed that aflatoxin production reduced in samples treated with 500 mg/ml of thiamine. In addition, the level of afIR gene expression was significantly reduced after treating with 500 and 250 mg/ml of vitamin B1. Conclusion: Based on the obtained results, thiamine could not inhibit the fungal growth completely. However, the rate of afIR gene expression and aflatoxin production was significantly reduced after fungal treating with thiamine. Consequently, using natural compounds such as vitamins may be regarded as potential antitoxic agent in food industry and the industries related to agriculture.

Polarized electron sources

Energy Technology Data Exchange (ETDEWEB)

Prepost, R. [Univ. of Wisconsin, Madison, WI (United States)

1994-12-01

The fundamentals of polarized electron sources are described with particular application to the Stanford Linear Accelerator Center. The SLAC polarized electron source is based on the principle of polarized photoemission from Gallium Arsenide. Recent developments using epitaxially grown, strained Gallium Arsenide cathodes have made it possible to obtain electron polarization significantly in excess of the conventional 50% polarization limit. The basic principles for Gallium and Arsenide polarized photoemitters are reviewed, and the extension of the basic technique to strained cathode structures is described. Results from laboratory measurements of strained photocathodes as well as operational results from the SLAC polarized source are presented.

Polarized electron sources

International Nuclear Information System (INIS)

Prepost, R.

1994-01-01

The fundamentals of polarized electron sources are described with particular application to the Stanford Linear Accelerator Center. The SLAC polarized electron source is based on the principle of polarized photoemission from Gallium Arsenide. Recent developments using epitaxially grown, strained Gallium Arsenide cathodes have made it possible to obtain electron polarization significantly in excess of the conventional 50% polarization limit. The basic principles for Gallium and Arsenide polarized photoemitters are reviewed, and the extension of the basic technique to strained cathode structures is described. Results from laboratory measurements of strained photocathodes as well as operational results from the SLAC polarized source are presented

Analyzing power of inclusive production of π+,π-, and KS0 by polarized protons at 13.3 and 18.5 GeV/c

International Nuclear Information System (INIS)

Bonner, B.E.; Buchanan, J.A.; Clement, J.M.; Corcoran, M.D.; Krishna, N.M.; Kruk, J.W.; Miettinen, H.E.; Moss, R.M.; Mutchler, G.S.; Nessi-Tedaldi, F.; Nessi, M.; Phillips, G.C.; Roberts, J.B.; Stevenson, P.M.; Tonse, S.R.; Birman, A.; Chung, S.U.; Etkin, A.; Fernow, R.C.; Kirk, H.; Protopopescu, S.D.; Willutzki, H.; Hallman, T.; Madansky, L.; Bar-Yam, Z.; Dowd, J.; Kern, W.; King, E.; Mayes, B.W.; Pinsky, L.S.

1990-01-01

We have measured the analyzing power in π + , π - , and K S 0 production by a polarized proton beam at 13.3 and 18.5 GeV/c. The data cover the central and the beam fragmentation region, in the transverse-momentum range up to 2 GeV/c. The results indicate that sizable effects are present at high x F and also persist into the hard-scattering region for K S 0 and π + . A zero value of the analyzing power was observed for π - production

Genetic relationships of extant brown bears (Ursus arctos) and polar bears (Ursus maritimus).

Science.gov (United States)

Cronin, Matthew A; MacNeil, Michael D

2012-01-01

Polar bears (Ursus maritimus) and brown bears (Ursus arctos) are closely related species for which extensive mitochondrial and nuclear phylogenetic comparisons have been made. We used previously published genotype data for 8 microsatellite DNA loci from 930 brown bears in 19 populations and 473 polar bears in 16 populations to compare the population genetic relationships of extant populations of the species. Genetic distances (Nei standard distance = 1.157), the proportion of private alleles (52% of alleles are not shared by the species), and Bayesian cluster analysis are consistent with morphological and life-history characteristics that distinguish polar bears and brown bears as different species with little or no gene flow among extant populations.

Update of the Polar SWIFT model for polar stratospheric ozone loss (Polar SWIFT version 2

Directory of Open Access Journals (Sweden)

I. Wohltmann

2017-07-01

Full Text Available The Polar SWIFT model is a fast scheme for calculating the chemistry of stratospheric ozone depletion in polar winter. It is intended for use in global climate models (GCMs and Earth system models (ESMs to enable the simulation of mutual interactions between the ozone layer and climate. To date, climate models often use prescribed ozone fields, since a full stratospheric chemistry scheme is computationally very expensive. Polar SWIFT is based on a set of coupled differential equations, which simulate the polar vortex-averaged mixing ratios of the key species involved in polar ozone depletion on a given vertical level. These species are O3, chemically active chlorine (ClOx, HCl, ClONO2 and HNO3. The only external input parameters that drive the model are the fraction of the polar vortex in sunlight and the fraction of the polar vortex below the temperatures necessary for the formation of polar stratospheric clouds. Here, we present an update of the Polar SWIFT model introducing several improvements over the original model formulation. In particular, the model is now trained on vortex-averaged reaction rates of the ATLAS Chemistry and Transport Model, which enables a detailed look at individual processes and an independent validation of the different parameterizations contained in the differential equations. The training of the original Polar SWIFT model was based on fitting complete model runs to satellite observations and did not allow for this. A revised formulation of the system of differential equations is developed, which closely fits vortex-averaged reaction rates from ATLAS that represent the main chemical processes influencing ozone. In addition, a parameterization for the HNO3 change by denitrification is included. The rates of change of the concentrations of the chemical species of the Polar SWIFT model are purely chemical rates of change in the new version, whereas in the original Polar SWIFT model, they included a transport effect

Increasing cocoa butter-like lipid production of Saccharomyces cerevisiae by expression of selected cocoa genes

DEFF Research Database (Denmark)

Wei, Yongjun; Gossing, Michael; Bergenholm, David

2017-01-01

for CB biosynthesis from the cocoa genome using a phylogenetic analysis approach. By expressing the selected cocoa genes in S. cerevisiae, we successfully increased total fatty acid production, TAG production and CBL production in some S. cerevisiae strains. The relative CBL content in three yeast...... higher level of CBL compared with the control strain. In summary, CBL production by S. cerevisiae were increased through expressing selected cocoa genes potentially involved in CB biosynthesis.......Cocoa butter (CB) extracted from cocoa beans mainly consists of three different kinds of triacylglycerols (TAGs), 1,3-dipalmitoyl-2-oleoyl-glycerol (POP, C16:0-C18:1-C16:0), 1-palmitoyl-3-stearoyl-2-oleoyl-glycerol(POS,C16:0C18:1-C18:0) and 1,3-distearoyl-2-oleoyl-glycerol (SOS, C18:0-C18:1-C18...

Product ion filtering with rapid polarity switching for the detection of all fumonisins and AAL-toxins.

Science.gov (United States)

Renaud, Justin B; Kelman, Megan J; Qi, Tianyu F; Seifert, Keith A; Sumarah, Mark W

2015-11-30

Fumonisins and AAL-toxins are structurally similar mycotoxins that contaminate agricultural crops and foodstuffs. Traditional analytical screening methods are designed to target the known compounds for which standards are available but there is clear evidence that many other derivatives exist and could be toxic. A fast, semi-targeted method for the detection of all known fumonisins, AAL-toxins and related emerging toxins is required. Strains of Fusarium verticillioides, Alternaria arborescens and Aspergillus welwitschiae were grown on their associated crops (maize, tomatoes, and grapes, respectively). Extracts were first analyzed in negative mode using product ion filtering to detect the tricarballylic ester product ion that is common to fumonisins and AAL-toxins (m/z 157.0142). During the same liquid chromatography (LC) run, rapid polarity switching was then used to collect positive mode tandem mass spectrometric (MS(2) ) data for characterization of the detected compounds. Fumonisin B1 , B2 , B3 and B4 were detected on Fusarium contaminated maize, AAL-toxins TA, TB, TD, TE were detected on Alternaria inoculated tomatoes and fumonisin B2 , B4 and B6 on Aspergillus contaminated grapes. Additionally, over 100 structurally related compounds possessing a tricarballylic ester were detected from the mould inoculated plant material. These included a hydroxyl-FB1 from F. verticillioides inoculated maize, keto derivatives of AAL-toxins from A. arborescens inoculated tomatoes, and two previously unreported classes of non-aminated fumonisins from Asp. welwitschiae contaminated grapes. A semi-targeted method for the detection of all fumonisins and AAL-toxins in foodstuffs was developed. The use of the distinctive tricarballylic ester product anion for detection combined with rapid polarity switching and positive mode MS(2) is an effective strategy for differentiating between known isomers such as FB1 and FB6 . This analytical tool is also effective for the identification of

Gene Disruption Technologies Have the Potential to Transform Stored Product Insect Pest Control

Directory of Open Access Journals (Sweden)

Lindsey C. Perkin

2016-09-01

Full Text Available Stored product insects feed on grains and processed commodities manufactured from grain post-harvest, reducing the nutritional value and contaminating food. Currently, the main defense against stored product insect pests is the pesticide fumigant phosphine. Phosphine is highly toxic to all animals, but is the most effective and economical control method, and thus is used extensively worldwide. However, many insect populations have become resistant to phosphine, in some cases to very high levels. New, environmentally benign and more effective control strategies are needed for stored product pests. RNA interference (RNAi may overcome pesticide resistance by targeting the expression of genes that contribute to resistance in insects. Most data on RNAi in stored product insects is from the coleopteran genetic model, Tribolium castaneum, since it has a strong RNAi response via injection of double stranded RNA (dsRNA in any life stage. Additionally, Clustered Regularly Interspaced Short Palindromic Repeats (CRISPR technology has been suggested as a potential resource for new pest control strategies. In this review we discuss background information on both gene disruption technologies and summarize the advances made in terms of molecular pest management in stored product insects, mainly T. castaneum, as well as complications and future needs.

Environmental contaminants activate human and polar bear (Ursus maritimus) pregnane X receptors (PXR, NR1I2) differently

Energy Technology Data Exchange (ETDEWEB)

Lille-Langøy, Roger, E-mail: Roger.lille-langoy@bio.uib.no [University of Bergen, Department of Biology, P.O. Box 7803, N-5020 Bergen (Norway); Goldstone, Jared V. [Woods Hole Oceanographic Institution, 266 Woods Hole Road, 02543-1050 Woods Hole, MA (United States); Rusten, Marte [University of Bergen, Department of Molecular Biology, P.O. Box 7803, N-5020 Bergen (Norway); Milnes, Matthew R. [Mars Hill University, 100 Athletic Street, Box 6671, Mars Hill, 28754 NC (United States); Male, Rune [University of Bergen, Department of Molecular Biology, P.O. Box 7803, N-5020 Bergen (Norway); Stegeman, John J. [Woods Hole Oceanographic Institution, 266 Woods Hole Road, 02543-1050 Woods Hole, MA (United States); Blumberg, Bruce [University of California, Irvine, 92697 CA (United States); Goksøyr, Anders [University of Bergen, Department of Biology, P.O. Box 7803, N-5020 Bergen (Norway)

2015-04-01

Background: Many persistent organic pollutants (POPs) accumulate readily in polar bears because of their position as apex predators in Arctic food webs. The pregnane X receptor (PXR, formally NR1I2, here proposed to be named promiscuous xenobiotic receptor) is a xenobiotic sensor that is directly involved in metabolizing pathways of a wide range of environmental contaminants. Objectives: In the present study, we comparably assess the ability of 51 selected pharmaceuticals, pesticides and emerging contaminants to activate PXRs from polar bears and humans using an in vitro luciferase reporter gene assay. Results: We found that polar bear PXR is activated by a wide range of our test compounds (68%) but has a slightly more narrow ligand specificity than human PXR that was activated by 86% of the 51 test compounds. The majority of the agonists identified (70%) produces a stronger induction of the reporter gene via human PXR than via polar bear PXR, however with some notable and environmentally relevant exceptions. Conclusions: Due to the observed differences in activation of polar bear and human PXRs, exposure of each species to environmental agents is likely to induce biotransformation differently in the two species. Bioinformatics analyses and structural modeling studies suggest that amino acids that are not part of the ligand-binding domain and do not interact with the ligand can modulate receptor activation. - Highlights: • Comparative study of ligand activation of human and polar bear PXRs. • Polar bear PXR is a promiscuous ligand-activated nuclear receptor but less so than human PXR. • Environmental contaminants activate human and polar bear PXRs differently. • Expression and ligand promiscuity indicate that PXR is a xenosensor in polar bears.

Environmental contaminants activate human and polar bear (Ursus maritimus) pregnane X receptors (PXR, NR1I2) differently

International Nuclear Information System (INIS)

Lille-Langøy, Roger; Goldstone, Jared V.; Rusten, Marte; Milnes, Matthew R.; Male, Rune; Stegeman, John J.; Blumberg, Bruce; Goksøyr, Anders

2015-01-01

Background: Many persistent organic pollutants (POPs) accumulate readily in polar bears because of their position as apex predators in Arctic food webs. The pregnane X receptor (PXR, formally NR1I2, here proposed to be named promiscuous xenobiotic receptor) is a xenobiotic sensor that is directly involved in metabolizing pathways of a wide range of environmental contaminants. Objectives: In the present study, we comparably assess the ability of 51 selected pharmaceuticals, pesticides and emerging contaminants to activate PXRs from polar bears and humans using an in vitro luciferase reporter gene assay. Results: We found that polar bear PXR is activated by a wide range of our test compounds (68%) but has a slightly more narrow ligand specificity than human PXR that was activated by 86% of the 51 test compounds. The majority of the agonists identified (70%) produces a stronger induction of the reporter gene via human PXR than via polar bear PXR, however with some notable and environmentally relevant exceptions. Conclusions: Due to the observed differences in activation of polar bear and human PXRs, exposure of each species to environmental agents is likely to induce biotransformation differently in the two species. Bioinformatics analyses and structural modeling studies suggest that amino acids that are not part of the ligand-binding domain and do not interact with the ligand can modulate receptor activation. - Highlights: • Comparative study of ligand activation of human and polar bear PXRs. • Polar bear PXR is a promiscuous ligand-activated nuclear receptor but less so than human PXR. • Environmental contaminants activate human and polar bear PXRs differently. • Expression and ligand promiscuity indicate that PXR is a xenosensor in polar bears

SPIN EFFECTS IN THE FRAGMENTATION OF TRANSVERSELY POLARIZED AND UNPOLARIZED QUARKS

International Nuclear Information System (INIS)

ANSELMINO, M.; BOER, D.; DALESIO, U.; MURGIA, F.

2001-01-01

We study the fragmentation of a transversely polarized quark into a non-collinear (kperpendicular ≠ 0) spinless hadron and the fragmentation of an unpolarized quark into a non collinear transversely polarized spin 1/2 baryon. These nonperturbative properties are described by spin and kperpendicular dependent fragmentation functions and are revealed in the observation of single spin asymmetries. Recent data on the production of pions in polarized semi-inclusive DIS and long known data on A polarization in unpolarized p-N processes are considered: these new fragmentation functions can describe the experimental results and the single spin effects in the quark fragmentation turn out to be surprisingly large

Synthesis of bacteriophage-coded gene products during infection of Escherichia coli with amber mutants of T3 and T7 defective in gene 1

DEFF Research Database (Denmark)

Issinger, O G; Hausmann, R

1973-01-01

During nonpermissive infection by a T7 amber mutant in gene 1 (phage RNA polymerase-deficient), synthesis of the products of the phage genes 3 (endonuclease), 3, 5 (lysozyme), 5 (DNA polymerase), and 17 (serum blocking power) was shown to occur at about half the rate as during wild-type infection...

Production of the associated J/ψ+γ with high transverse momentum in polarized proton-proton collisions at √s = 50-500 GeV

International Nuclear Information System (INIS)

Usubov, Z.U.

1996-01-01

The paper considers a possibility to investigate the associated production of J/ψ+γ with high transverse momentum in polarized pp-interactions at Relativistic Heavy Ion Collider energies. The differential cross sections and their asymmetries are evaluated. The accuracy which can be achieved in the gluon distribution function measurement is discussed. 16 refs., 4 figs., 1 tab

Promoting Diversity Through Polar Interdisciplinary Coordinated Education (Polar ICE)

Science.gov (United States)

McDonnell, J. D.; Hotaling, L. A.; Garza, C.; Van Dyk, P. B.; Hunter-thomson, K. I.; Middendorf, J.; Daniel, A.; Matsumoto, G. I.; Schofield, O.

2017-12-01

Polar Interdisciplinary Coordinated Education (ICE) is an education and outreach program designed to provide public access to the Antarctic and Arctic regions through polar data and interactions with the scientists. The program provides multi-faceted science communication training for early career scientists that consist of a face-to face workshop and opportunities to apply these skills. The key components of the scientist training workshop include cultural competency training, deconstructing/decoding science for non-expert audiences, the art of telling science stories, and networking with members of the education and outreach community and reflecting on communication skills. Scientists partner with educators to provide professional development for K-12 educators and support for student research symposia. Polar ICE has initiated a Polar Literacy initiative that provides both a grounding in big ideas in polar science and science communication training designed to underscore the importance of the Polar Regions to the public while promoting interdisciplinary collaborations between scientists and educators. Our ultimate objective is to promote STEM identity through professional development of scientists and educators while developing career awareness of STEM pathways in Polar science.

Polarization-independent broadband meta-holograms via polarization-dependent nanoholes.

Science.gov (United States)

Zhang, Xiaohu; Li, Xiong; Jin, Jinjin; Pu, Mingbo; Ma, Xiaoliang; Luo, Jun; Guo, Yinghui; Wang, Changtao; Luo, Xiangang

2018-05-17

Composed of ultrathin metal or dielectric nanostructures, metasurfaces can manipulate the phase, amplitude and polarization of electromagnetic waves at a subwavelength scale, which is promising for flat optical devices. In general, metasurfaces composed of space-variant anisotropic units are sensitive to the incident polarization due to the inherent polarization dependent geometric phase. Here, we implement polarization-independent broadband metasurface holograms constructed by polarization-dependent anisotropic elliptical nanoholes by elaborate design of complex amplitude holograms. The fabricated meta-hologram exhibits a polarization insensitive feature with an acceptable image quality. We verify the feasibility of the design algorithm for three-dimensional (3D) meta-holograms with simulation and the feasibility for two-dimensional (2D) meta-holograms is experimentally demonstrated at a broadband wavelength range from 405 nm to 632.8 nm. The effective polarization-independent broadband complex wavefront control with anisotropic elliptical nanoholes proposed in this paper greatly promotes the practical applications of the metasurface in technologies associated with wavefront manipulation, such as flat lens, colorful holographic displays and optical storage.

Jet cross sections in polarized photon-hadron collisions

CERN Document Server

de Florian, Daniel

1999-01-01

We present a computation of one- and two-jet cross sections in polarized photon-hadron collisions, which is accurate to next-to-leading order in QCD. Our results can be used to compute photoproduction cross sections in electron-proton scattering. To this purpose, we investigate the structure of the polarized Weizsaecker-Williams function, where we include a universal, non-logarithmic term, neglected in the literature. We construct a Monte Carlo code, within the framework of the subtraction method, and we use it to study the phenomenology of jet production in the energy range relevant to HERA. In particular, we investigate the perturbative stability of our results, and we discuss the possibility of constraining polarized parton densities of the proton and the photon using jet data.

Commissioning experiment of the polarized internal gas target with deuterium at ANKE/COSY

Energy Technology Data Exchange (ETDEWEB)

Gou, Boxing [Institut fuer Kernphysik, Forschungszentrum Juelich (Germany); Institute of Modern Physics, Chinese Academy of Sciences, Lanzhou (China); Collaboration: ANKE-Collaboration

2012-07-01

In order to conduct the production experiments with polarized deuterium target and (un)polarized proton beam at ANKE/COSY, a commissioning experiment of the polarized internal target with deuterium is imperative. The commissioning experiment includes the measurements of both the vector (Q{sub y}) and tensor (Q{sub yy}) polarization of the deuterium gas target through the nuclear reactions with large and well known analyzing powers, which can be detected in ANKE. The dependence of the polarizations along the storage cell is also determined. The poster presents the physics case for the experiments with deuterium polarized internal target and the apparatus needed for the commissioning experiment, as well as the procedure of extraction for spin observables.

Polar Biomedical Research - An Assessment.

Science.gov (United States)

1982-10-01