WorldWideScience

Sample records for points simplex square

  1. A dual exterior point simplex type algorithm for the minimum cost network flow problem

    Directory of Open Access Journals (Sweden)

    Geranis George

    2009-01-01

    Full Text Available A new dual simplex type algorithm for the Minimum Cost Network Flow Problem (MCNFP is presented. The proposed algorithm belongs to a special 'exterior- point simplex type' category. Similarly to the classical network dual simplex algorithm (NDSA, this algorithm starts with a dual feasible tree-solution and reduces the primal infeasibility, iteration by iteration. However, contrary to the NDSA, the new algorithm does not always maintain a dual feasible solution. Instead, the new algorithm might reach a basic point (tree-solution outside the dual feasible area (exterior point - dual infeasible tree.

  2. Squares

    CERN Document Server

    Borth, Teddy

    2016-01-01

    They are made up of four even sides. This makes the shape perfect for board games, putting tiles on the floor, or holding syrup on a waffle! Easy text and large pictures help early readers discover that squares are fun!.

  3. Least median of squares filtering of locally optimal point matches for compressible flow image registration

    International Nuclear Information System (INIS)

    Castillo, Edward; Guerrero, Thomas; Castillo, Richard; White, Benjamin; Rojo, Javier

    2012-01-01

    Compressible flow based image registration operates under the assumption that the mass of the imaged material is conserved from one image to the next. Depending on how the mass conservation assumption is modeled, the performance of existing compressible flow methods is limited by factors such as image quality, noise, large magnitude voxel displacements, and computational requirements. The Least Median of Squares Filtered Compressible Flow (LFC) method introduced here is based on a localized, nonlinear least squares, compressible flow model that describes the displacement of a single voxel that lends itself to a simple grid search (block matching) optimization strategy. Spatially inaccurate grid search point matches, corresponding to erroneous local minimizers of the nonlinear compressible flow model, are removed by a novel filtering approach based on least median of squares fitting and the forward search outlier detection method. The spatial accuracy of the method is measured using ten thoracic CT image sets and large samples of expert determined landmarks (available at www.dir-lab.com). The LFC method produces an average error within the intra-observer error on eight of the ten cases, indicating that the method is capable of achieving a high spatial accuracy for thoracic CT registration. (paper)

  4. The Fusion Loops of the Initial Prefusion Conformation of Herpes Simplex Virus 1 Fusion Protein Point Toward the Membrane

    Directory of Open Access Journals (Sweden)

    Juan Fontana

    2017-08-01

    Full Text Available All enveloped viruses, including herpesviruses, must fuse their envelope with the host membrane to deliver their genomes into target cells, making this essential step subject to interference by antibodies and drugs. Viral fusion is mediated by a viral surface protein that transits from an initial prefusion conformation to a final postfusion conformation. Strikingly, the prefusion conformation of the herpesvirus fusion protein, gB, is poorly understood. Herpes simplex virus (HSV, a model system for herpesviruses, causes diseases ranging from mild skin lesions to serious encephalitis and neonatal infections. Using cryo-electron tomography and subtomogram averaging, we have characterized the structure of the prefusion conformation and fusion intermediates of HSV-1 gB. To this end, we have set up a system that generates microvesicles displaying full-length gB on their envelope. We confirmed proper folding of gB by nondenaturing electrophoresis-Western blotting with a panel of monoclonal antibodies (MAbs covering all gB domains. To elucidate the arrangement of gB domains, we labeled them by using (i mutagenesis to insert fluorescent proteins at specific positions, (ii coexpression of gB with Fabs for a neutralizing MAb with known binding sites, and (iii incubation of gB with an antibody directed against the fusion loops. Our results show that gB starts in a compact prefusion conformation with the fusion loops pointing toward the viral membrane and suggest, for the first time, a model for gB’s conformational rearrangements during fusion. These experiments further illustrate how neutralizing antibodies can interfere with the essential gB structural transitions that mediate viral entry and therefore infectivity.

  5. The nonabelian tensor square of Bieberbach group of dimension five with dihedral point group of order eight

    Science.gov (United States)

    Fauzi, Wan Nor Farhana Wan Mohd; Idrus, Nor'ashiqin Mohd; Masri, Rohaidah; Sarmin, Nor Haniza

    2014-07-01

    The nonabelian tensor product was originated in homotopy theory as well as in algebraic K-theory. The nonabelian tensor square is a special case of the nonabelian tensor product where the product is defined if the two groups act on each other in a compatible way and their action are taken to be conjugation. In this paper, the computation of nonabelian tensor square of a Bieberbach group, which is a torsion free crystallographic group, of dimension five with dihedral point group of order eight is determined. Groups, Algorithms and Programming (GAP) software has been used to assist and verify the results.

  6. Asymptotic behavior of the mean square displacement of the Brownian parametric oscillator near the singular point

    International Nuclear Information System (INIS)

    Tashiro, Tohru

    2009-01-01

    A parametric oscillator with damping driven by white noise is studied. The mean square displacement (MSD) in the long-time limit is derived analytically for the case that the static force vanishes, which was not treated in the past work (Tashiro and Morita 2007 Physica A 377 401). The formula is asymptotic but is applicable to a general periodic function. On the basis of this formula, some periodic functions reducing MSD remarkably are proposed

  7. Convergence estimates in probability and in expectation for discrete least squares with noisy evaluations at random points

    KAUST Repository

    Migliorati, Giovanni

    2015-08-28

    We study the accuracy of the discrete least-squares approximation on a finite dimensional space of a real-valued target function from noisy pointwise evaluations at independent random points distributed according to a given sampling probability measure. The convergence estimates are given in mean-square sense with respect to the sampling measure. The noise may be correlated with the location of the evaluation and may have nonzero mean (offset). We consider both cases of bounded or square-integrable noise / offset. We prove conditions between the number of sampling points and the dimension of the underlying approximation space that ensure a stable and accurate approximation. Particular focus is on deriving estimates in probability within a given confidence level. We analyze how the best approximation error and the noise terms affect the convergence rate and the overall confidence level achieved by the convergence estimate. The proofs of our convergence estimates in probability use arguments from the theory of large deviations to bound the noise term. Finally we address the particular case of multivariate polynomial approximation spaces with any density in the beta family, including uniform and Chebyshev.

  8. Simultaneous spectrophotometric determination of nitroaniline isomers after cloud point extraction by using least-squares support vector machines

    Science.gov (United States)

    Niazi, Ali; Ghasemi, Jahanbakhsh; Yazdanipour, Ateesa

    2007-11-01

    Cloud point extraction has been used for the preconcentration of m-nitroaniline, o-nitroaniline and p-nitroaniline and later simultaneous spectrophotometric determination using polyethylene glycol tert-octylphenyl ether (Triton X-100) as surfactant. The resolution of a ternary mixture of the nitroaniline isomers (after extraction by cloud point) by the application of least-squares support vector machines (LS-SVM) was performed. The chemical parameters affecting the separation phase and detection process were studied and optimized. Under the optimum experimental conditions (i.e. pH 7.0, Triton X-100 = 0.6%, equilibrium time 20 min and cloud point 75 °C), calibration graphs were linear in the range of 0.2-20.0, 0.1-15.0 and 0.1-17.0 μg ml -1 with detection limits of 0.08, 0.05 and 0.06 μg ml -1 for m-nitroaniline, o-nitroaniline and p-nitroaniline, respectively. The experimental calibration matrix was designed with 21 mixtures of these chemicals. The concentrations were varied between calibration graphs concentrations of nitroaniline isomers. The root mean square error of prediction (RMSEP) for m-nitroaniline, o-nitroaniline and p-nitroaniline were 0.0146, 0.0308 and 0.0304, respectively. This procedure allows the simultaneous determination of nitroaniline isomers in synthetic and real matrix samples good reliability of the determination was proved.

  9. 'AJUSTAR' a interactive processor for to Fit, by means of least squares, one variable polinomials (arbitrary degree) at experimental points

    International Nuclear Information System (INIS)

    Sanchez Miro, J.J.; Pena, J.

    1991-01-01

    In this repport is offered, to scientist and technical people, a numeric tool consisting in a FORTRAN program, of interactive use, with destination to make lineal 'least squares', fittings on any set of empirical observations. The method based in the orthogonal functions (for discrete case), instead of direct solving the equations system, is used. The procedure includes also the optionally facilities of: variable change, direct interpolation, correlation non linear factor, 'weights' of the points, confidence intervals (Scheffe, Miller, Student), and plotting results. (Author). 10 refs

  10. Ajustar: A interactive processor for to fit, by means of least squares, one variable polynomials (arbitrary degree) at experimental points

    International Nuclear Information System (INIS)

    Sanchez Miro, J. J.; Pena Gutierrez, J.

    1991-01-01

    In this report is offered, to scientist and technical people, a numeric tool consisting in a FORTRAN program, of interactive use, with destination to make lineal l east squares , fittings on any set of empirical observations. The method based in the orthogonal functions (for discrete case), instead of direct solving the equations system, is used. The procedure includes also the optionally facilities of: variable change, direct interpolation, correlation non linear factor, w eights o f the points, confidence intervals (Schelle, Miller, Student), and plotting results. (Author) 10 refs

  11. Comparison of T-Square, Point Centered Quarter, and N-Tree Sampling Methods in Pittosporum undulatum Invaded Woodlands

    Directory of Open Access Journals (Sweden)

    Lurdes Borges Silva

    2017-01-01

    Full Text Available Tree density is an important parameter affecting ecosystems functions and management decisions, while tree distribution patterns affect sampling design. Pittosporum undulatum stands in the Azores are being targeted with a biomass valorization program, for which efficient tree density estimators are required. We compared T-Square sampling, Point Centered Quarter Method (PCQM, and N-tree sampling with benchmark quadrat (QD sampling in six 900 m2 plots established at P. undulatum stands in São Miguel Island. A total of 15 estimators were tested using a data resampling approach. The estimated density range (344–5056 trees/ha was found to agree with previous studies using PCQM only. Although with a tendency to underestimate tree density (in comparison with QD, overall, T-Square sampling appeared to be the most accurate and precise method, followed by PCQM. Tree distribution pattern was found to be slightly aggregated in 4 of the 6 stands. Considering (1 the low level of bias and high precision, (2 the consistency among three estimators, (3 the possibility of use with aggregated patterns, and (4 the possibility of obtaining a larger number of independent tree parameter estimates, we recommend the use of T-Square sampling in P. undulatum stands within the framework of a biomass valorization program.

  12. The presentation of the nonabelian tensor square of a Bieberbach group of dimension five with dihedral point group

    Science.gov (United States)

    Fauzi, Wan Nor Farhana Wan Mohd; Idrus, Nor'ashiqin Mohd; Masri, Rohaidah; Ting, Tan Yee; Sarmin, Nor Haniza; Hassim, Hazzirah Izzati Mat

    2014-12-01

    One of the homological functors of a group, is the nonabelian tensor square. It is important in the determination of the other homological functors of a group. In order to compute the nonabelian tensor square, we need to get its independent generators and its presentation. In this paper, we present the calculation of getting the presentation of the nonabelian tensor square of the group. The presentation is computed based on its independent generators by using the polycyclic method.

  13. The central subgroup of the nonabelian tensor square of Bieberbach group of dimension three with point group C2 × C2

    Science.gov (United States)

    Ladi, Nor Fadzilah Abdul; Masri, Rohaidah; Idrus, Nor'ashiqin Mohd; Ting, Tan Yee

    2017-05-01

    Bieberbach groups are crystallographic groups. By computing the central subgroup of the nonabelian tensor square of a group, the properties of the group can be determined. In this paper, the central subgroup of the nonabelian tensor square of one Bieberbach group of dimension three with point group C2 × C2 is computed. In order to compute the ∇ (S3 (3)), the derived subgroup and the abelianization of the group are first constructed.

  14. Neonatal herpes simplex pneumonia.

    OpenAIRE

    Lissauer, T J; Shaw, P J; Underhill, G

    1984-01-01

    A neonate with herpes simplex pneumonia is described. Herpes simplex infection should be considered in the differential diagnosis of pneumonia in newborn infants, even in the absence of clinically apparent herpes in the mother.

  15. Address Points, The Address Point layer contains an address point for almost every structure over 200 square feet and for some vacant properties. Attributes include addresses, sub-units, address use, LAT/LONG, 10-digit SDAT taxpins, political areas and more., Published in 2013, 1:2400 (1in=200ft) scale, Baltimore County Government.

    Data.gov (United States)

    NSGIC Local Govt | GIS Inventory — Address Points dataset current as of 2013. The Address Point layer contains an address point for almost every structure over 200 square feet and for some vacant...

  16. Herpes simplex encephalitis

    International Nuclear Information System (INIS)

    Bakken, J.S.; Camenga, D.L.; Glazier, M.C.; Coughlan, J.D.

    1989-01-01

    Early institution of therapy with acyclovir is essential for the successful outcome in herpes simplex encephalitis. Brain biopsy remains the only conclusive means of establishing the diagnosis, but many fear possible biobsy complications. Thus, therapy is often instituted when the diagnosis is clinically suspected, even though cerebral computed tomography and other diagnostic studies may be inconclusive. Nuclear magnetic resonance imaging (NMR) has proven to be a sensitive tool for diagnosing presumptive herpes simplex encephalitis. This case presentation demonstrates the superiority of cerebral NMR over computerized tomography for detecting early temporal lobe changes consistent with acute herpes simplex encephalitis

  17. Serum herpes simplex antibodies

    Science.gov (United States)

    ... causes cold sores (oral herpes). HSV-2 causes genital herpes. How the Test is Performed A blood sample ... person has ever been infected with oral or genital herpes . It looks for antibodies to herpes simplex virus ...

  18. Simplex/Metasys -

    Data.gov (United States)

    Department of Transportation — Simplex is a COTS application providing fire alarm system detection and notification for buildings at MMAC. Metasys is a COTS application that monitors and controls...

  19. Digital squares

    DEFF Research Database (Denmark)

    Forchhammer, Søren; Kim, Chul E

    1988-01-01

    Digital squares are defined and their geometric properties characterized. A linear time algorithm is presented that considers a convex digital region and determines whether or not it is a digital square. The algorithm also determines the range of the values of the parameter set of its preimages. ....... The analysis involves transforming the boundary of a digital region into parameter space of slope and y-intercept......Digital squares are defined and their geometric properties characterized. A linear time algorithm is presented that considers a convex digital region and determines whether or not it is a digital square. The algorithm also determines the range of the values of the parameter set of its preimages...

  20. Herpes Simplex Virus 1 Mutant with Point Mutations in UL39 Is Impaired for Acute Viral Replication in Mice, Establishment of Latency, and Explant-Induced Reactivation.

    Science.gov (United States)

    Mostafa, Heba H; Thompson, Thornton W; Konen, Adam J; Haenchen, Steve D; Hilliard, Joshua G; Macdonald, Stuart J; Morrison, Lynda A; Davido, David J

    2018-04-01

    In the process of generating herpes simplex virus 1 (HSV-1) mutations in the viral regulatory gene encoding infected cell protein 0 (ICP0), we isolated a viral mutant, termed KOS-NA, that was severely impaired for acute replication in the eyes and trigeminal ganglia (TG) of mice, defective in establishing a latent infection, and reactivated poorly from explanted TG. To identify the secondary mutation(s) responsible for the impaired phenotypes of this mutant, we sequenced the KOS-NA genome and noted that it contained two nonsynonymous mutations in UL39 , which encodes the large subunit of ribonucleotide reductase, ICP6. These mutations resulted in lysine-to-proline (residue 393) and arginine-to-histidine (residue 950) substitutions in ICP6. To determine whether alteration of these amino acids was responsible for the KOS-NA phenotypes in vivo , we recombined the wild-type UL39 gene into the KOS-NA genome and rescued its acute replication phenotypes in mice. To further establish the role of UL39 in KOS-NA's decreased pathogenicity, the UL39 mutations were recombined into HSV-1 (generating UL39 mut ), and this mutant virus showed reduced ocular and TG replication in mice comparable to that of KOS-NA. Interestingly, ICP6 protein levels were reduced in KOS-NA-infected cells relative to the wild-type protein. Moreover, we observed that KOS-NA does not counteract caspase 8-induced apoptosis, unlike wild-type strain KOS. Based on alignment studies with other HSV-1 ICP6 homologs, our data suggest that amino acid 950 of ICP6 likely plays an important role in ICP6 accumulation and inhibition of apoptosis, consequently impairing HSV-1 pathogenesis in a mouse model of HSV-1 infection. IMPORTANCE HSV-1 is a major human pathogen that infects ∼80% of the human population and can be life threatening to infected neonates or immunocompromised individuals. Effective therapies for treatment of recurrent HSV-1 infections are limited, which emphasizes a critical need to understand in

  1. Atopy in Lichen Simplex Chronicus

    Directory of Open Access Journals (Sweden)

    T V Gopalakrishnan Nair

    1981-01-01

    Full Text Available A study of 50 patients with lichen simplex chronicus and 50 patients with scabies as control shows a significant family history of atopic disorders in patients with lichen simplex chronicus.

  2. Dynamic Squares.

    Science.gov (United States)

    Hubbard, Guy

    2003-01-01

    Discusses the role of the square in art and explains that students can study modern art. Includes background information and artwork by four artists: (1) Richard Anuszkiewicz; (2) Victor Vasarely; (3) Frank Stella; and (4) Bridget Riley. (CMK)

  3. Construction of an accurate quartic force field by using generalised least-squares fitting and experimental design

    International Nuclear Information System (INIS)

    Carbonniere, Philippe; Begue, Didier; Dargelos, Alain; Pouchan, Claude

    2004-01-01

    In this work we present an attractive least-squares fitting procedure which allows for the calculation of a quartic force field by jointly using energy, gradient, and Hessian data, obtained from electronic wave function calculations on a suitably chosen grid of points. We use the experimental design to select the grid points: a 'simplex-sum' of Box and Behnken grid was chosen for its efficiency and accuracy. We illustrate the numerical implementations of the method by using the energy and gradient data for H 2 O and H 2 CO. The B3LYP/cc-pVTZ quartic force field performed from 11 and 44 simplex-sum configurations shows excellent agreement in comparison to the classical 44 and 168 energy calculations

  4. Epidermolysis bullosa simplex

    African Journals Online (AJOL)

    Prof Ezechukwu

    2012-03-01

    Mar 1, 2012 ... CASE REPORT. Niger J Paed 2012; 39 (4):194 –196. Peterside O. Kunle-Olowu OE. Adeyemi OO. Akinbami FO. Omene J. Epidermolysis bullosa simplex: A case report ... few reported cases in Nigeria. 3, 4, 5 and none from Bayelsa .... ineum which may have been triggered by friction from his clothing and ...

  5. Herpes simplex-encefalitis

    DEFF Research Database (Denmark)

    Jørgensen, Laura Krogh; Mogensen, Trine Hyrup

    2017-01-01

    Herpes simplex encephalitis (HSE) is a rare disease, although it is the most common form of sporadic encephalitis worldwide. Recently, studies have provided important new insight into the genetic and immunological basis of HSE. However, even in the presence of antiviral treatment, mortality...

  6. Democracy Squared

    DEFF Research Database (Denmark)

    Rose, Jeremy; Sæbø, Øystein

    2005-01-01

    On-line political communities, such as the Norwegian site Demokratitorget (Democracy Square), are often designed according to a set of un-reflected assumptions about the political interests of their potential members. In political science, democracy is not taken as given in this way, but can...... be represented by different models which characterize different relationships between politicians and the citizens they represent. This paper uses quantitative and qualitative content analysis to analyze the communication mediated by the Democracy Square discussion forum in the first ten months of its life...

  7. Rapid, sensitive, and specific lateral-flow immunochromatographic point-of-care device for detection of herpes simplex virus type 2-specific immunoglobulin G antibodies in serum and whole blood.

    Science.gov (United States)

    Laderman, Elisabeth I; Whitworth, Emma; Dumaual, Erickson; Jones, Mark; Hudak, Andrew; Hogrefe, Wayne; Carney, Jim; Groen, Jan

    2008-01-01

    Herpes simplex virus type 2 (HSV-2) is a common human pathogen that can cause a variety of clinical manifestations in humans. In order to provide near-patient results to allow for faster counseling and treatment, a rapid point-of-care test that is accurate and simple to use is desirable. Here, we describe the development and evaluation of an HSV-2 immunoglobulin G (IgG)-specific antibody lateral-flow immunochromatographic assay (LFIA) based on colloidal gold nanoparticles. A total of 359 serum samples and 100 whole-blood samples were tested in the newly developed HSV-2 LFIA. Serum results were compared to those from the HerpeSelect HSV-2 enzyme-linked immunosorbent assay (ELISA), and whole-blood sample results were compared to those of both ELISA and HerpeSelect HSV-1 and -2 immunoblotting (IB). The sensitivity of the HSV-2 LFIA compared to that of the HerpeSelect ELISA was 100% (89/89), and the specificity was 97.3% (257/264). Cross-reactivity with HSV-1 IgG-positive serum samples was observed in 2.6% (5/196) of samples, 2.9% (1/34) for rubella virus, and 6.2% (1/16) for Epstein-Barr virus. No cross-reactivity in varicella-zoster virus or cytomegalovirus IgG-positive serum samples was observed. No interference was observed from bilirubin-, triglyceride-, albumin-, or hemoglobin-spiked samples. The concordance of the LFIA results between capillary whole blood, EDTA-treated venous whole blood, heparin-treated venous whole blood, and serum was 99% (99/100). In conclusion, the LFIA for HSV-2 IgG-specific antibodies demonstrated excellent sensitivity, specificity, and concordance for both serum and whole-blood samples compared to the sensitivity, specificity, and concordance of both HSV-2 ELISA and IB.

  8. Rapid, Sensitive, and Specific Lateral-Flow Immunochromatographic Point-of-Care Device for Detection of Herpes Simplex Virus Type 2-Specific Immunoglobulin G Antibodies in Serum and Whole Blood▿

    Science.gov (United States)

    Laderman, Elisabeth I.; Whitworth, Emma; Dumaual, Erickson; Jones, Mark; Hudak, Andrew; Hogrefe, Wayne; Carney, Jim; Groen, Jan

    2008-01-01

    Herpes simplex virus type 2 (HSV-2) is a common human pathogen that can cause a variety of clinical manifestations in humans. In order to provide near-patient results to allow for faster counseling and treatment, a rapid point-of-care test that is accurate and simple to use is desirable. Here, we describe the development and evaluation of an HSV-2 immunoglobulin G (IgG)-specific antibody lateral-flow immunochromatographic assay (LFIA) based on colloidal gold nanoparticles. A total of 359 serum samples and 100 whole-blood samples were tested in the newly developed HSV-2 LFIA. Serum results were compared to those from the HerpeSelect HSV-2 enzyme-linked immunosorbent assay (ELISA), and whole-blood sample results were compared to those of both ELISA and HerpeSelect HSV-1 and -2 immunoblotting (IB). The sensitivity of the HSV-2 LFIA compared to that of the HerpeSelect ELISA was 100% (89/89), and the specificity was 97.3% (257/264). Cross-reactivity with HSV-1 IgG-positive serum samples was observed in 2.6% (5/196) of samples, 2.9% (1/34) for rubella virus, and 6.2% (1/16) for Epstein-Barr virus. No cross-reactivity in varicella-zoster virus or cytomegalovirus IgG-positive serum samples was observed. No interference was observed from bilirubin-, triglyceride-, albumin-, or hemoglobin-spiked samples. The concordance of the LFIA results between capillary whole blood, EDTA-treated venous whole blood, heparin-treated venous whole blood, and serum was 99% (99/100). In conclusion, the LFIA for HSV-2 IgG-specific antibodies demonstrated excellent sensitivity, specificity, and concordance for both serum and whole-blood samples compared to the sensitivity, specificity, and concordance of both HSV-2 ELISA and IB. PMID:18003814

  9. Latin Squares

    Indian Academy of Sciences (India)

    Admin

    2012-09-07

    Sep 7, 2012 ... sheets of transparency and place the second transparency on top of the first. Keep the top one a little to the right of the bottom transparency, so that the Greek letters are not covered by their Latin counterparts. Then we see an array as shown in Figure 4 (obtained by `superposing' the two Latin squares).

  10. All SQUARE

    CERN Multimedia

    1972-01-01

    With the existing Systems for using the accelerated protons, it is possible to supply only one slow ejected beam (feeding the East Hall) and, at the same time, to have only a small percentage of the beam on an internal target (feeding the South Hall). The arrangement will be replaced by a new System called SQUARE (Semi- QUAdrupole Resonant Extraction) which will give greater flexibility in supplying the three areas.

  11. Clustering in Hilbert simplex geometry

    KAUST Repository

    Nielsen, Frank

    2017-04-03

    Clustering categorical distributions in the probability simplex is a fundamental primitive often met in applications dealing with histograms or mixtures of multinomials. Traditionally, the differential-geometric structure of the probability simplex has been used either by (i) setting the Riemannian metric tensor to the Fisher information matrix of the categorical distributions, or (ii) defining the information-geometric structure induced by a smooth dissimilarity measure, called a divergence. In this paper, we introduce a novel computationally-friendly non-Riemannian framework for modeling the probability simplex: Hilbert simplex geometry. We discuss the pros and cons of those three statistical modelings, and compare them experimentally for clustering tasks.

  12. Generalized acute mucocutaneous herpes simplex

    Directory of Open Access Journals (Sweden)

    Mittal R

    1994-01-01

    Full Text Available A case of generalized acute mucocutaneous herpes simplex is reported in a 15 years old boy. There was neither underlying disease nor any evidence of genetic or acquired immune deficiency.

  13. Herpes Simplex Virus (Cold Sores)

    Science.gov (United States)

    ... Print Share Cold Sores in Children: About the Herpes Simplex Virus Page Content ​A child's toddler and ... Cold sores (also called fever blisters or oral herpes) start as small blisters that form around the ...

  14. Least-squares gradient calculation from multi-point observations of scalar and vector fields: methodology and applications with Cluster in the plasmasphere

    Directory of Open Access Journals (Sweden)

    J. De Keyser

    2007-05-01

    Full Text Available This paper describes a general-purpose algorithm for computing the gradients in space and time of a scalar field, a vector field, or a divergence-free vector field, from in situ measurements by one or more spacecraft. The algorithm provides total error estimates on the computed gradient, including the effects of measurement errors, the errors due to a lack of spatio-temporal homogeneity, and errors due to small-scale fluctuations. It also has the ability to diagnose the conditioning of the problem. Optimal use is made of the data, in terms of exploiting the maximum amount of information relative to the uncertainty on the data, by solving the problem in a weighted least-squares sense. The method is illustrated using Cluster magnetic field and electron density data to compute various gradients during a traversal of the inner magnetosphere. In particular, Cluster is shown to cross azimuthal density structure, and the existence of field-aligned currents in the plasmasphere is demonstrated.

  15. Simplex sliding mode control for nonlinear uncertain systems via chaos optimization

    International Nuclear Information System (INIS)

    Lu, Zhao; Shieh, Leang-San; Chen, Guanrong; Coleman, Norman P.

    2005-01-01

    As an emerging effective approach to nonlinear robust control, simplex sliding mode control demonstrates some attractive features not possessed by the conventional sliding mode control method, from both theoretical and practical points of view. However, no systematic approach is currently available for computing the simplex control vectors in nonlinear sliding mode control. In this paper, chaos-based optimization is exploited so as to develop a systematic approach to seeking the simplex control vectors; particularly, the flexibility of simplex control is enhanced by making the simplex control vectors dependent on the Euclidean norm of the sliding vector rather than being constant, which result in both reduction of the chattering and speedup of the convergence. Computer simulation on a nonlinear uncertain system is given to illustrate the effectiveness of the proposed control method

  16. The social dynamics of school bullying : The necessary dialogue between the blind men around the elephant and the possible meeting point at the socialecological square

    Directory of Open Access Journals (Sweden)

    Robert Thornberg

    2015-07-01

    Full Text Available Bullying has over the years been examined and explained in individual as well as in contextual terms, and from a wide range of different theories and methods. A growing number of bullying researchers approach bullying as a socially complex phenomenon and from social psychological and sociological perspectives. There is today a tension between theoretical perspectives on bullying, but also a need for investigating the social and contextual aspects of bullying further. In this article, I will argue for the necessity of dialogue between different theoretical perspectives and the inclusive potential of the social-ecological framework to create a meeting point of theories in order to develop a more comprehensive understanding of school bullying.

  17. Herpes Simplex Virus

    Science.gov (United States)

    Khoddami, Maliheh; Nadji, Seyed Alireza; Dehghanian, Paria

    2017-01-01

    Langerhans cell histiocytosis (LCH) is a rare histiocytic proliferative disorder of unknown etiology and mainly affects young children. The histological feature is granuloma-like proliferation of langerhans-type dendritic cells. Although the possible role of viruses such as Epstein-Barr virus ( EBV , Human Herpes virus -4 ), Human Herpes virus-6 ( HHV-6 ), Herpes Simplex virus ( HSV ) types 1 and 2 and Cytomegalovirus (CMV, Human Herpes virus-5 ) is suggested in the pathogenesis of LCH by some investigators, its exact pathophysiology has not been cleared yet. In this study, we investigated the presence of HSV types 1 and 2 in Iranian children with LCH. In this retrospective study, we investigated the prevalence of presence of HSV types 1 and 2 (in 30 patients with LCH), using paraffin-embedded tissue samples and 30 age and tissue-matched controls (operated for reasons other than infectious diseases) from the Department of Pediatric Pathology, Tehran, Iran, by nested Polymerase Chain reaction method. No ethical issues arose in the study, because only the pathology reports were reviewed and patients were anonymous. We failed to find HSV types 1 and 2 DNA in any of the 30 patients with LCH or the control group. According to our findings, HSV types 1 and 2 do not appear to have any etiologic role in the pathogenesis of LCH in Iranian children. These results are in accordance with previous investigations with negative findings.

  18. Chronic herpes simplex virus encephalitis in childhood.

    NARCIS (Netherlands)

    Leen, W.G.; Weemaes, C.M.R.; Verbeek, M.M.; Willemsen, M.A.A.P.; Rotteveel, J.J.

    2006-01-01

    Although herpes simplex virus is a major cause of acute encephalitis in childhood, chronic herpes simplex virus encephalitis has only rarely been reported. This report presents a case of chronic herpes simplex virus encephalitis in a 6-year-old female. Diagnosis was based on the detection of herpes

  19. MRI of herpes simplex encephalitis

    International Nuclear Information System (INIS)

    Demaerel, P.; Wilms, G.; Johannik, K.; Hecke, P. van; Baert, A.L.; Robberecht, W.; Carton, H.

    1992-01-01

    The magnetic resonance imaging (MRI) findings in eight patients with herpes simplex meningoence phalitis were reviewed: 14 examinations were analysed. The most striking finding was high signal intensity in the temporal lobe(s) with the typical configuration known from CT. Meningeal enhancement after Gd-DTPA administration was clearly seen in four patients. Haemorrhagic changes are much better seen on MRI than on CT. When adequate motion control can be achieved, MRI becomes the examination of choice in the diagnosis and follow-up of herpes simplex encephalitis. Localized 1 H MR spectroscopy also proved promising in the study of neuronal loss. (orig.)

  20. Contingency Estimation of States for Unmanned Aerial Vehicle using a Spherical Simplex Unscented Filter

    DEFF Research Database (Denmark)

    Hahn, Tobias; Hansen, Søren; Blanke, Mogens

    2012-01-01

    Aiming at survival from contingency situations for unmanned aerial vehicles, a square root spherical simplex unscented Kalman filter is applied for state and parameter estimation and a rough model is used for state prediction when essential measurements are lost. Processing real flight data...

  1. Non-euclidean simplex optimization

    International Nuclear Information System (INIS)

    Silver, G.L.

    1977-01-01

    Geometric optimization techniques useful for studying chemical equilibrium traditionally rely upon principles of euclidean geometry, but such algorithms may also be based upon principles of a non-euclidean geometry. The sequential simplex method is adapted to the hyperbolic plane, and application of optimization to problems such as the potentiometric titration of plutonium is suggested

  2. Laboratory determinations in Anisakis simplex allergy.

    Science.gov (United States)

    del Pozo, M D; Moneo, I; de Corres, L F; Audicana, M T; Muñoz, D; Fernandez, E; Navarro, J A; García, M

    1996-04-01

    Anaphylactic reactions caused by the fish nematode, Anisakis simplex, after ingestion of parasitized fish, have been described. This study was undertaken to confirm, by histamine release tests, that A. simplex is able to trigger IgE-mediated reactions and to describe the serologic profiles in this sensitization. Twelve patients who had anaphylactic symptoms after ingestion of cooked fish and positive prick test results and determinations of IgE to A. simplex were studied by indirect IgG ELISA and IgG and IgE immunoblotting. Sera from subjects parasitized with other nematodes, patients with fish allergy, and healthy donors were included as controls. A histamine release test was performed in a representative case. IgE immunoblotting was a specific test to detect A. simplex allergy. IgE-reacting bands were found in serum samples from 11 of our patients. Specific IgG antibodies were found by ELISA and immunoblotting, but this response was less specific. Histamine release was positive with A. simplex extract and negative with fish. A specific and intense immune response to an A. simplex extract was found in our patients. A. simplex is able to elicit anaphylactic reactions, and A. simplex allergy should be suspected in patients with allergic symptoms after ingestion of fish. A positive prick test response to A. simplex and a negative response to fish is a good indication for a diagnosis of A. simplex allergy.

  3. Herpes simplex virus encephalitis: neuroradiological diagnosis

    International Nuclear Information System (INIS)

    Struffert, T.; Reith, W.

    2000-01-01

    Herpes simplex virus encephalitis (HSE) is the most frequent viral encephalitis, as a rule with the starting point and centre within the temporal lobe. If untreated, HSE is usually fatal, thus diagnosis has to be established rapidly. Treatment with Acyclovir should begin as soon possible. As MRI is extremely sensitive in detecting the early inflammatory changes, it should be initially performed, especially as in the early stadium CT may be unspecific. We recommend the following examination protocol: coronar T1-weighted MR imaging before and after administration of gadopentetate dimeglumine, coronar FLAIR sequence and axial T2-weighted imaging. The diagnostic proof is to show the evidence of viral DNA by polymerase chain reaction (PCR) in cerebrospinal liquor. (orig.) [de

  4. APPLICATION OF THE MULTIRESPONSE OPTIMISATION SIMPLEX METHOD TO THE BIODIESEL - B100 OBTAINING PROCESS

    Directory of Open Access Journals (Sweden)

    Julyane Karolyne Teixeira da Costa

    2016-03-01

    Full Text Available The process of obtaining B100 biodiesel from vegetable oil and animal fat mixtures by transesterification under basic conditions was optimised using the super-modified simplex method. For simultaneous optimisation, yield, cost, oxidative stability and Cold Filter Plugging Point (CFPP, were used as responses, and the limits were established according to the experimental data and the conformity parameters established by legislations. Based on the predictive equations obtained from the simplex-centroid design-coupled functions, the multi-response optimisation showed an optimal formulation containing 38.34 % soybean oil, 21.90 % beef tallow and 39.25 % poultry fat. The validation showed that there are no significant differences between the predicted and experimental values. The simplex-centroid mixture design and simplex optimisation methods were effective tools in obtaining biodiesel B100, using a mixture of different raw materials.

  5. Herpes simplex virus following stab phlebectomy.

    Science.gov (United States)

    Hicks, Caitlin W; Lum, Ying Wei; Heller, Jennifer A

    2017-03-01

    Herpes simplex virus infection following surgery is an unusual postoperative phenomenon. Many mechanisms have been suggested, with the most likely explanation related to latent virus reactivation due to a proinflammatory response in the setting of local trauma. Here, we present a case of herpes simplex virus reactivation in an immunocompetent female following a conventional right lower extremity stab phlebectomy. Salient clinical and physical examination findings are described, and management strategies for herpes simplex virus reactivation are outlined. This is the first known case report of herpes simplex virus reactivation following lower extremity phlebectomy.

  6. AKLSQF - LEAST SQUARES CURVE FITTING

    Science.gov (United States)

    Kantak, A. V.

    1994-01-01

    The Least Squares Curve Fitting program, AKLSQF, computes the polynomial which will least square fit uniformly spaced data easily and efficiently. The program allows the user to specify the tolerable least squares error in the fitting or allows the user to specify the polynomial degree. In both cases AKLSQF returns the polynomial and the actual least squares fit error incurred in the operation. The data may be supplied to the routine either by direct keyboard entry or via a file. AKLSQF produces the least squares polynomial in two steps. First, the data points are least squares fitted using the orthogonal factorial polynomials. The result is then reduced to a regular polynomial using Sterling numbers of the first kind. If an error tolerance is specified, the program starts with a polynomial of degree 1 and computes the least squares fit error. The degree of the polynomial used for fitting is then increased successively until the error criterion specified by the user is met. At every step the polynomial as well as the least squares fitting error is printed to the screen. In general, the program can produce a curve fitting up to a 100 degree polynomial. All computations in the program are carried out under Double Precision format for real numbers and under long integer format for integers to provide the maximum accuracy possible. AKLSQF was written for an IBM PC X/AT or compatible using Microsoft's Quick Basic compiler. It has been implemented under DOS 3.2.1 using 23K of RAM. AKLSQF was developed in 1989.

  7. Neonatal Herpes Simplex Virus Infection.

    Science.gov (United States)

    James, Scott H; Kimberlin, David W

    2015-09-01

    Herpes simplex virus (HSV) 1 and HSV-2 infections are highly prevalent worldwide and are characterized by establishing lifelong infection with periods of latency interspersed with periodic episodes of reactivation. Acquisition of HSV by an infant during the peripartum or postpartum period results in neonatal HSV disease, a rare but significant infection that can be associated with severe morbidity and mortality, especially if there is dissemination or central nervous system involvement. Diagnostic and therapeutic advances have led to improvements in mortality and, to a lesser extent, neurodevelopmental outcomes, but room exists for further improvement. Copyright © 2015 Elsevier Inc. All rights reserved.

  8. On the Denesting of Nested Square Roots

    Science.gov (United States)

    Gkioulekas, Eleftherios

    2017-01-01

    We present the basic theory of denesting nested square roots, from an elementary point of view, suitable for lower level coursework. Necessary and sufficient conditions are given for direct denesting, where the nested expression is rewritten as a sum of square roots of rational numbers, and for indirect denesting, where the nested expression is…

  9. Squaring to the Rap!

    Science.gov (United States)

    Adams, Deborah

    2006-01-01

    This article describes an approach to teaching square dance that is advantageous for both the teacher and students. Lessons in dance become more meaningful to students when the music and vocabulary is consistent with experiences in their own lives. When students create their own squaring to the rap, lessons become more student-centered,…

  10. Irrational Square Roots

    Science.gov (United States)

    Misiurewicz, Michal

    2013-01-01

    If students are presented the standard proof of irrationality of [square root]2, can they generalize it to a proof of the irrationality of "[square root]p", "p" a prime if, instead of considering divisibility by "p", they cling to the notions of even and odd used in the standard proof?

  11. Dermoscopy Findings of Hidroacanthoma Simplex

    Directory of Open Access Journals (Sweden)

    Yota Sato

    2014-05-01

    Full Text Available Hidroacanthoma simplex (HAS, also known as intraepidermal eccrine poroma, is a rare eccrine adnexal tumor that tends to be misdiagnosed as other types of benign skin tumor, including clonal seborrheic keratosis. Notably, HAS is sometimes misdiagnosed and treated by cryosurgery as seborrheic keratosis, which could trigger the later development of porocarcinoma. Therefore, accurate diagnosis of HAS is indispensable for dermatologists to avoid the development of malignant tumors by an unsuitable treatment. In this report, we present the characteristic dermoscopy findings of HAS. Indeed, the dermoscopy findings might be related to the melanin-rich necrotic cells in the epidermis, which are quite different from dermoscopy findings of clonal seborrheic keratosis. As a previous report suggested, it is difficult for a dermatologist to differentiate HAS from clonal seborrheic keratosis by the naked eye. Our findings might be supportive for the early diagnosis of HAS.

  12. Herpes Simplex Virus-1 and Bell's Palsy

    Directory of Open Access Journals (Sweden)

    J Gordon Millichap

    2008-05-01

    Full Text Available The association between herpes simplex virus-1 (HSV-1 infection and Bell palsy was determined in 47 children studied at Children's Hospital at Montefiore, Bronx, NY. Swabs of saliva and conjunctiva were taken for PCR testing.

  13. Anisakis simplex: dangerous--dead and alive?

    Science.gov (United States)

    Audicana, María Teresa; Ansotegui, Ignacio J; de Corres, Luis Fernández; Kennedy, Malcolm W

    2002-01-01

    The risk of infection with Anisakis simplex and related parasites of fish has been recognized for some time, but it is now emerging that ingestion of material from dead parasites in food is also potentially dangerous. The resulting allergic reactions range from rapid onset and potentially lethal anaphylactic reactions to chronic, debilitating conditions. This review discusses the problems and clinical implications associated with A. simplex, other related conditions, and the way in which disease manifestations vary from person to person.

  14. Herpes Simplex Virus Infection in Pregnancy

    Directory of Open Access Journals (Sweden)

    Gianluca Straface

    2012-01-01

    The greatest risk of transmission to the fetus and the newborn occurs in case of an initial maternal infection contracted in the second half of pregnancy. The risk of transmission of maternal-fetal-neonatal herpes simplex can be decreased by performing a treatment with antiviral drugs or resorting to a caesarean section in some specific cases. The purpose of this paper is to provide recommendations on management of herpes simplex infections in pregnancy and strategies to prevent transmission from mother to fetus.

  15. Town Square for Kids.

    Science.gov (United States)

    Parker, Dan

    2001-01-01

    Presents design features of the Dawson Elementary School (Corpus Chriti, Texas) where an atmosphere of an old town square and the feeling of community have been created. Photos and a floor plan are provided. (GR)

  16. Vector Spaces of New Special Magic Squares: Reflective Magic Squares, Corner Magic Squares, and Skew-Regular Magic Squares

    OpenAIRE

    Rungratgasame, Thitarie; Amornpornthum, Pattharapham; Boonmee, Phuwanat; Cheko, Busrun; Fuangfung, Nattaphon

    2016-01-01

    The definition of a regular magic square motivates us to introduce the new special magic squares, which are reflective magic squares, corner magic squares, and skew-regular magic squares. Combining the concepts of magic squares and linear algebra, we consider a magic square as a matrix and find the dimensions of the vector spaces of these magic squares under the standard addition and scalar multiplication of matrices by using the rank-nullity theorem.

  17. Power system state estimation using an iteratively reweighted least squares method for sequential L{sub 1}-regression

    Energy Technology Data Exchange (ETDEWEB)

    Jabr, R.A. [Electrical, Computer and Communication Engineering Department, Notre Dame University, P.O. Box 72, Zouk Mikhael, Zouk Mosbeh (Lebanon)

    2006-02-15

    This paper presents an implementation of the least absolute value (LAV) power system state estimator based on obtaining a sequence of solutions to the L{sub 1}-regression problem using an iteratively reweighted least squares (IRLS{sub L1}) method. The proposed implementation avoids reformulating the regression problem into standard linear programming (LP) form and consequently does not require the use of common methods of LP, such as those based on the simplex method or interior-point methods. It is shown that the IRLS{sub L1} method is equivalent to solving a sequence of linear weighted least squares (LS) problems. Thus, its implementation presents little additional effort since the sparse LS solver is common to existing LS state estimators. Studies on the termination criteria of the IRLS{sub L1} method have been carried out to determine a procedure for which the proposed estimator is more computationally efficient than a previously proposed non-linear iteratively reweighted least squares (IRLS) estimator. Indeed, it is revealed that the proposed method is a generalization of the previously reported IRLS estimator, but is based on more rigorous theory. (author)

  18. Smoothed square well potential

    Energy Technology Data Exchange (ETDEWEB)

    Salamon, P. [Institute for Nuclear Research Hungarian Academy of Sciences (ATOMKI), Debrecen (Hungary); Vertse, T. [Institute for Nuclear Research Hungarian Academy of Sciences (ATOMKI), Debrecen (Hungary); University of Debrecen, Faculty of Informatics, Debrecen (Hungary)

    2017-07-15

    The classical square well potential is smoothed with a finite range smoothing function in order to get a new simple strictly finite range form for the phenomenological nuclear potential. The smoothed square well form becomes exactly zero smoothly at a finite distance, in contrast to the Woods-Saxon form. If the smoothing range is four times the diffuseness of the Woods-Saxon shape both the central and the spin-orbit terms of the Woods-Saxon shape are reproduced reasonably well. The bound single-particle energies in a Woods-Saxon potential can be well reproduced with those in the smoothed square well potential. The same is true for the complex energies of the narrow resonances. (orig.)

  19. 21 CFR 866.3305 - Herpes simplex virus serological assays.

    Science.gov (United States)

    2010-04-01

    ... 21 Food and Drugs 8 2010-04-01 2010-04-01 false Herpes simplex virus serological assays. 866.3305... (CONTINUED) MEDICAL DEVICES IMMUNOLOGY AND MICROBIOLOGY DEVICES Serological Reagents § 866.3305 Herpes simplex virus serological assays. (a) Identification. Herpes simplex virus serological assays are devices...

  20. THE CHI SQUARE TEST

    OpenAIRE

    Ugoni, Antony; Walker, Bruce F.

    1995-01-01

    The Chi square test is a statistical test which measures the association between two categorical variables. A working knowledge of tests of this nature are important for the chiropractor and osteopath in order to be able to critically appraise the literature.

  1. [Immune evasion by herpes simplex viruses].

    Science.gov (United States)

    Retamal-Díaz, Angello R; Suazo, Paula A; Garrido, Ignacio; Kalergis, Alexis M; González, Pablo A

    2015-02-01

    Herpes simplex viruses and humans have co-existed for tens of thousands of years. This long relationship has translated into the evolution and selection of viral determinants to evade the host immune response and reciprocally the evolution and selection of host immune components for limiting virus infection and damage. Currently there are no vaccines available to avoid infection with these viruses or therapies to cure them. Herpes simplex viruses are neurotropic and reside latently in neurons at the trigeminal and dorsal root ganglia, occasionally reactivating. Most viral recurrences are subclinical and thus, unnoticed. Here, we discuss the initial steps of infection by herpes simplex viruses and the molecular mechanisms they have developed to evade innate and adaptive immunity. A better understanding of the molecular mechanisms evolved by these viruses to evade host immunity should help us envision novel vaccine strategies and therapies that limit infection and dissemination.

  2. Radionuclide imaging in herpes simplex encephalitis

    International Nuclear Information System (INIS)

    Karlin, C.A.; Robinson, R.G.; Hinthorn, D.R.; Liu, C.

    1978-01-01

    Eight patients with herpes simplex encephalitis among the 10 cases diagnosed at the University of Kansas Medical Center from 1966 to 1976 were studied with /sup 99m/Tc early in their diagnostic work-up. The images were unilaterally positive in the temporal lobe area in all 8 patients. Radionuclide studies can suggest herpes simplex as the specific etiology in cases of encephalitis and can also indicate the best site for brain biopsy to confirm the diagnosis by fluorescent antibody techniques. Appropriate antiviral therapy should be instituted as soon as possible to alter the course of this destructive form of viral encephalitis

  3. [Intrauterine herpes simplex virus infection].

    Science.gov (United States)

    Hoppen, T; Eis-Hübinger, A M; Schild, R L; Enders, G; Hansmann, M; Rister, M; Bartmann, P

    2001-01-01

    Early fetal herpes simplex virus (HSV) infection is rarely documented. Only the minority of affected fetuses survive this condition. At 19 weeks of gestation the first episode of a genital HSV-infection of a pregnant woman was treated with local interferon beta. At 34 weeks of gestation hydrocephalus with secondary microcephaly and microphthalmia of both eyes was detected by ultrasonography. In the amniotic fluid HSV type 2 (HSV-2) was isolated and HSV-2-DNA was detected by PCR. The serum of the mother proved positive for HSV-2 (glycoprotein G2)-specific IgG-antibodies. No other infectious causes were apparent on further testing. At 35 + 4 weeks gestation a small-for-gestational-age neonate (2130 g) with microcephaly (29 cm head circumference) was born by spontaneous vaginal delivery. Scarce ulcerative skin lesions and vesicles, hepatosplenomegaly and microphthalmia were diagnosed. Furthermore, encephalomalacia with parenchymal destruction, cataract of both eyes and aplasia of the maculae and papillae were found. HSV-2-PCR was tested positive in chorionic cells and an umbilical segment of the placenta as well as in swabs from both eyes, throat, and a herpetic skin lesion collected during the first 5 days of life. HSV-IgM-antibodies were found in the umbilical cord blood. Local and intravenous treatment with aciclovir was started. The infant exhibited signs of a severely malfunctioning central nervous system. At the age of 4 months the boy suffered from generalised cerebral seizures. He died at the age of 9 months as a consequence of respiratory insufficiency with consecutive circulation failure. The case of an intrauterine HSV-2-infection is presented. The time of onset of fetal infection was most probably at the time of the maternal disease (19 weeks of gestation). Inspite of the very early infection the fetus did not die in utero. Especially, if a primary genital HSV-2-infection of a pregnant woman is suspected, which can be proven by serological means only

  4. SHORT COMMUNICATION Serological profiles of Herpes simplex ...

    African Journals Online (AJOL)

    Dr.Mirambo

    Journal of Infectious Diseases, 185, 45-52. Watson-Jones, D., Weiss, H.A., Rusizoka, M., Changalucha, J., Baisley, K., Mugeye, K., Tanton, C.,. Ross, D., Everett, D. & Clayton, T. (2008) Effect of herpes simplex suppression on incidence of HIV among women in Tanzania. New England Journal of Medicine 358: 1560-1571.

  5. Diterpenoids and phenolics from pseudopanax simplex

    Directory of Open Access Journals (Sweden)

    JOHN W. VAN KLINK

    2006-02-01

    Full Text Available An ethanolic extract of Pseudopanax simplex yielded kaempferol-3,7-di-O-rhamnopyranoside, chlorogenic acid, maltol glucoside, ent-kaur-16-en-18-acid, and 4R,5S,9R,10S,13S-ent-pimara-7,15-dien-19-oic acid. Full NMR data for the last compound are reported for the first time.

  6. Regular simplex refinement by regular simplices

    NARCIS (Netherlands)

    Casado, L.G.; Tóth, B.G.; Hendrix, E.M.T.; García, I.

    2014-01-01

    A naturalway to define branching in Branch-and-Bound for blending problemis to do bisection. The disadvantage of bisectioning is that partition sets are in general irregular. A regular simplex with fixed orientation can be determined by its center and size, allowing storage savings in a Branchand-

  7. Multifractal behaviour of в-simplex lattice

    Indian Academy of Sciences (India)

    We study the asymptotic behaviour of resistance scaling and fluctuation of resistance that give rise to flicker noise in an -simplex lattice. We propose a simple method to calculate the resistance scaling and give a closed-form formula to calculate the exponent, , associated with resistance scaling, for any . Using current ...

  8. Antiviral drug resistance of herpes simplex virus

    NARCIS (Netherlands)

    Stranska, Ruzena

    2004-01-01

    Infections with herpes simplex virus (HSV) usually have an asymptomatic or benign course. However, severe infections do occur, particularly in HIV/AIDS patients or transplant recipients, and may be life-threatening unless adequate antiviral therapy is given. Since its introduction in the early

  9. Can Herpes Simplex Virus Encephalitis Cause Aphasia?

    Science.gov (United States)

    Naude, H.; Pretorius, E.

    2003-01-01

    Aphasia implies the loss or impairment of language caused by brain damage. The key to understanding the nature of aphasic symptoms is the neuro-anatomical site of brain damage, and not the causative agent. However, because "Herpes simplex" virus (HSV) encephalitis infection usually affects the frontal and temporal lobes, subcortical…

  10. Sudoku Squares as Experimental Designs

    Indian Academy of Sciences (India)

    IAS Admin

    number of Sudoku squares of order 9 [12]. Latin squares are used as statistical experimental de- signs that study the effect of three explanatory variables, each at n levels, on a response variable, using only n2 experimental units. In a Latin square design (LSD), the experimental units are laid out in an n × n square ar- ray.

  11. ELMO Bumpy Square proposal

    International Nuclear Information System (INIS)

    Dory, R.A.; Uckan, N.A.; Ard, W.B.

    1986-10-01

    The ELMO Bumpy Square (EBS) concept consists of four straight magnetic mirror arrays linked by four high-field corner coils. Extensive calculations show that this configuration offers major improvements over the ELMO Bumpy Torus (EBT) in particle confinement, heating, transport, ring production, and stability. The components of the EBT device at Oak Ridge National Laboratory can be reconfigured into a square arrangement having straight sides composed of EBT coils, with new microwave cavities and high-field corners designed and built for this application. The elimination of neoclassical convection, identified as the dominant mechanism for the limited confinement in EBT, will give the EBS device substantially improved confinement and the flexibility to explore the concepts that produce this improvement. The primary goals of the EBS program are twofold: first, to improve the physics of confinement in toroidal systems by developing the concepts of plasma stabilization using the effects of energetic electrons and confinement optimization using magnetic field shaping and electrostatic potential control to limit particle drift, and second, to develop bumpy toroid devices as attractive candidates for fusion reactors. This report presents a brief review of the physics analyses that support the EBS concept, discussions of the design and expected performance of the EBS device, a description of the EBS experimental program, and a review of the reactor potential of bumpy toroid configurations. Detailed information is presented in the appendices

  12. ELMO Bumpy Square proposal

    Energy Technology Data Exchange (ETDEWEB)

    Dory, R.A.; Uckan, N.A.; Ard, W.B.; Batchelor, D.B.; Berry, L.A.; Bryan, W.E.; Dandl, R.A.; Guest, G.E.; Haste, G.R.; Hastings, D.E.

    1986-10-01

    The ELMO Bumpy Square (EBS) concept consists of four straight magnetic mirror arrays linked by four high-field corner coils. Extensive calculations show that this configuration offers major improvements over the ELMO Bumpy Torus (EBT) in particle confinement, heating, transport, ring production, and stability. The components of the EBT device at Oak Ridge National Laboratory can be reconfigured into a square arrangement having straight sides composed of EBT coils, with new microwave cavities and high-field corners designed and built for this application. The elimination of neoclassical convection, identified as the dominant mechanism for the limited confinement in EBT, will give the EBS device substantially improved confinement and the flexibility to explore the concepts that produce this improvement. The primary goals of the EBS program are twofold: first, to improve the physics of confinement in toroidal systems by developing the concepts of plasma stabilization using the effects of energetic electrons and confinement optimization using magnetic field shaping and electrostatic potential control to limit particle drift, and second, to develop bumpy toroid devices as attractive candidates for fusion reactors. This report presents a brief review of the physics analyses that support the EBS concept, discussions of the design and expected performance of the EBS device, a description of the EBS experimental program, and a review of the reactor potential of bumpy toroid configurations. Detailed information is presented in the appendices.

  13. Generalized conjugate gradient squared

    Energy Technology Data Exchange (ETDEWEB)

    Fokkema, D.R.; Sleijpen, G.L.G. [Utrecht Univ. (Netherlands)

    1994-12-31

    In order to solve non-symmetric linear systems of equations, the Conjugate Gradient Squared (CGS) is a well-known and widely used iterative method. In practice the method converges fast, often twice as fast as the Bi-Conjugate Gradient method. This is what you may expect, since CGS uses the square of the BiCG polynomial. However, CGS may suffer from its erratic convergence behavior. The method may diverge or the approximate solution may be inaccurate. BiCGSTAB uses the BiCG polynomial and a product of linear factors in an attempt to smoothen the convergence. In many cases, this has proven to be very effective. Unfortunately, the convergence of BiCGSTAB may stall when a linear factor (nearly) degenerates. BiCGstab({ell}) is designed to overcome this degeneration of linear factors. It generalizes BiCGSTAB and uses both the BiCG polynomial and a product of higher order factors. Still, CGS may converge faster than BiCGSTAB or BiCGstab({ell}). So instead of using a product of linear or higher order factors, it may be worthwhile to look for other polynomials. Since the BiCG polynomial is based on a three term recursion, a natural choice would be a polynomial based on another three term recursion. Possibly, a suitable choice of recursion coefficients would result in method that converges faster or as fast as CGS, but less erratic. It turns out that an algorithm for such a method can easily be formulated. One particular choice for the recursion coefficients leads to CGS. Therefore one could call this algorithm generalized CGS. Another choice for the recursion coefficients leads to BiCGSTAB. It is therefore possible to mix linear factors and some polynomial based on a three term recursion. This way one may get the best of both worlds. The authors will report on their findings.

  14. After Tiananmen Square.

    Science.gov (United States)

    MacFarquhar, Roderick

    1989-01-01

    Discusses the implications for scholarly research of the military action taken by the Chinese government during the recent student protests. Points out practical problems as well as moral issues concerning the resumption of normal scholarly activities in China. Explains the possible effects of China becoming a more closed society. (KO)

  15. Decompressive craniectomy in herpes simplex encephalitis

    Directory of Open Access Journals (Sweden)

    Muhammed Jasim Abdul Jalal

    2015-01-01

    Full Text Available Intracranial hypertension is a common cause of morbidity in herpes simplex encephalitis (HSE. HSE is the most common form of acute viral encephalitis. Hereby we report a case of HSE in which decompressive craniectomy was performed to treat refractory intracranial hypertension. A 32-year-old male presented with headache, vomiting, fever, and focal seizures involving the right upper limb. Cerebrospinal fluid-meningoencephalitic profile was positive for herpes simplex. Magnetic resonance image of the brain showed swollen and edematous right temporal lobe with increased signal in gray matter and subcortical white matter with loss of gray, white differentiation in T2-weighted sequences. Decompressive craniectomy was performed in view of refractory intracranial hypertension. Decompressive surgery for HSE with refractory hypertension can positively affect patient survival, with good outcomes in terms of cognitive functions.

  16. [Ocular hypertension in herpes simplex keratouveitis].

    Science.gov (United States)

    Burcea, M; Avram, Corina-Ioana; Stamate, Alina-Cristina; Malciolu, R; Oprea, S; Zemba, M

    2014-01-01

    The herpes simplex virus is one of the most common pathogens in humans, who are seropositive for the virus in 90% of the cases at the adult age. It determines reccurent infections in more than a third of the population and these infections depend on the immune response of the host. Ocular infections of newborns are due to the herpes simplex virus type 2, meanwhile type 1 is found predominantly at adults; almost all ocular structures can be affected. HSV-1 in the most frequent etiologic agent in infectious anterior uveitis (with the varicelo-zosterian virus) and it is responsible for 6-10% of all cases of anterior uveitis. More than half of the keratouveitides due to HSV will develop intraocular hypertension and open-angle secondary glaucoma, during reccurences and most of them will resolve after proper control of inflammation.

  17. Serial CT scannings in herpes simplex encephalitis

    International Nuclear Information System (INIS)

    Fukushima, Masashi; Sawada, Tohru; Kuriyama, Yoshihiro; Kinugawa, Hidekazu; Yamaguchi, Takenori

    1981-01-01

    Two patients with serologically confirmed herpes simplex encephalitis were studied by serial CT scannings. Case 1, a 60-year-old woman, was admitted to National Cardiovascular Center because of headache, fever, and attacks of Jacksonian seizure. Case 2, a 54-year-old man, was admitted because of fever, consciousness disturbance and right hemipare sis. Pleocytosis (mainly lymphocytes) and elevation of protein content in cerebrospinal fluid were observed in both cases. Both patients presented ''das apallische Syndrom'' one month after admission. The diagnosis of herpes simplex encephalitis was confirmed by typical clinical courses and by greater than fourfold rises in serum antibody titer for herpes simplex virus as well as that in cerebrospinal fluid in case 1. Characteristic CT findings observed in these two cases were summarized as follows: Within a week after the onset, no obvious abnormalities could be detected on CT scans (Case 1). Two weeks after the onset, a large low-density area appeared in the left temporal lobe and in the contralateral insular cortex with midline shift toward the right side (Case 2). One month later, an ill-defined linear and ring-like high-density area (Case 1), or a well-defined high-density area (Case 2), that was enhanced after contrast administration, was observed in the large low-density area in the temporal lobe. These findings were considered as characteristic for hemorrhagic encephalitis. These high-density areas disappeared two months later, however, widespread and intensified low-density areas still remained. In both cases, the basal ganglia and thalamus were completely spared on CT scans. From these observations, it can be concluded that serial CT scannings are quite useful for diagnosis of herpes simplex encephalitis. (author)

  18. Computed tomography of herpes simplex encephalitis

    International Nuclear Information System (INIS)

    Rodiek, S.O.; Backmund, H.; Max-Planck-Institut fuer Psychiatrie, Muenchen

    1984-01-01

    Referring to 9 patients of our own material we report on the pattern of distribution and the development of CT-changes in herpes simplex encephalitis (HSE). Our cases include the outstanding findings of a primarily hemorrhagic HSE and an extensive calcification at the residual stage on the borderline of widespread tissue necrosis on a baby. With respect to literature we receive a quite homogenous picture, reflecting the crucial characteristics of the disease as known from neuropathology. (orig.) [de

  19. [Herpes simplex virus infections in Algiers].

    Science.gov (United States)

    Meguenni, S; Djenaoui, T; Bendib, A; Bouhadjar, H; Lalliam, N; Allouache, A; Bouguermouh, A

    1989-01-01

    The purpose of this study was to determine the prevalence of herpes simplex virus antibodies among the population in Algiers. Anti-bodies to HSV1 are acquired rapidly between the ages of 1 and 6 years and 81.25% of the population is HSV1 seropositive by 15 years of age. Patients suffering from genital disorders possess HSV type 2 antibodies at a rate significantly higher (p less than 0.001) than in the control group.

  20. Inactivation of Herpes Simplex Viruses by Nonionic Surfactants

    Science.gov (United States)

    Asculai, Samuel S.; Weis, Margaret T.; Rancourt, Martha W.; Kupferberg, A. B.

    1978-01-01

    Nonionic surface-active agents possessing ether or amide linkages between the hydrophillic and hydrophobic portions of the molecule rapidly inactivated the infectivity of herpes simplex viruses. The activity stemmed from the ability of nonionic surfactants to dissolve lipid-containing membranes. This was confirmed by observing surfactant destruction of mammalian cell plasma membranes and herpes simplex virus envelopes. Proprietary vaginal contraceptive formulations containing nonionic surfactants also inactivated herpes simplex virus infectivity. This observation suggests that nonionic surfactants in appropriate formulation could effectively prevent herpes simplex virus transmission. Images PMID:208460

  1. Ajustar: A interactive processor for to fit, by means of least squares, one variable polynomials (arbitrary degree) at experimental points; Ajustar: Un procesador interactivo para ajuste por minimos cuadrados de polinomios algebraicos (en una sola variable y grado arbitrario) a conjuntos de datos experimentales

    Energy Technology Data Exchange (ETDEWEB)

    Sanchez Miro, J. J.; Pena Gutierrez, J.

    1991-07-01

    In this report is offered, to scientist and technical people, a numeric tool consisting in a FORTRAN program, of interactive use, with destination to make lineal {sup l}east squares{sup ,} fittings on any set of empirical observations. The method based in the orthogonal functions (for discrete case), instead of direct solving the equations system, is used. The procedure includes also the optionally facilities of: variable change, direct interpolation, correlation non linear factor, {sup w}eights{sup o}f the points, confidence intervals (Schelle, Miller, Student), and plotting results. (Author) 10 refs.

  2. Attitude Estimation Based on the Spherical Simplex Transformation Modified Unscented Kalman Filter

    Directory of Open Access Journals (Sweden)

    Jianwei Zhao

    2014-01-01

    Full Text Available An antenna attitude estimation algorithm is proposed to improve the antenna pointing accuracy for the satellite communication on-the-move. The extrapolated angular acceleration is adopted to improve the performance of the time response. The states of the system are modified according to the modification rules. The spherical simplex transformation unscented Kalman filter is used to improve the precision of the estimated attitude and decrease the calculation of the unscented Kalman filter. The experiment results show that the proposed algorithm can improve the instantaneity of the estimated attitude and the precision of the antenna pointing, which meets the requirement of the antenna pointing.

  3. Intracerebral hematoma complicating herpes simplex encephalitis.

    Science.gov (United States)

    Rodríguez-Sainz, Aida; Escalza-Cortina, Inés; Guio-Carrión, Laura; Matute-Nieves, Alexandra; Gómez-Beldarrain, Marian; Carbayo-Lozano, Guillermo; Garcia-Monco, Juan Carlos

    2013-10-01

    To describe two patients who developed an intracranial hematoma as a complication of temporal lobe encephalitis due to herpes simplex type 1 virus, and to review the literature. The first patient, a 45-year-old woman developed a brain hematoma in the location of the encephalitic lesion on day 9 after the onset of herpes simplex encephalitis (HSE) that required surgical evacuation. The second patient, a 53-year-old woman was being treated for HSE; on day 8 after admission a temporal lobe hematoma with midline shift was disclosed due to persistent headache. Both patients survived but were left with sequelae. We conducted a PubMed/MEDLINE search from 1986 to April 2013 on this topic. We have found 20 additional cases reported in the literature and review their characteristics. Hemorrhage was present on admission in 35% of pooled patients, and consistently involved the area of encephalitis. Clinical presentation of intracranial hemorrhage overlapped the encephalitic symptoms in two-thirds of the patients. Half of patients underwent surgery. Overall, mortality rate was low (5.2%), and half of patients fully recovered. Intracranial bleeding, although infrequent, can complicate the evolution of herpes simplex encephalitis and should be borne in mind since its presence may require neurosurgery. Although its presentation may overlap the encephalitic features, the lack of improvement or the worsening of initial symptoms, particularly during the second week of admission, should lead to this suspicion and to perform a neuroimaging study. Copyright © 2013 Elsevier B.V. All rights reserved.

  4. Applications of square-related theorems

    Science.gov (United States)

    Srinivasan, V. K.

    2014-04-01

    The square centre of a given square is the point of intersection of its two diagonals. When two squares of different side lengths share the same square centre, there are in general four diagonals that go through the same square centre. The Two Squares Theorem developed in this paper summarizes some nice theoretical conclusions that can be obtained when two squares of different side lengths share the same square centre. These results provide the theoretical basis for two of the constructions given in the book of H.S. Hall and F.H. Stevens , 'A Shorter School Geometry, Part 1, Metric Edition'. In page 134 of this book, the authors present, in exercise 4, a practical construction which leads to a verification of the Pythagorean theorem. Subsequently in Theorems 29 and 30, the authors present the standard proofs of the Pythagorean theorem and its converse. In page 140, the authors present, in exercise 15, what amounts to a geometric construction, whose verification involves a simple algebraic identity. Both the constructions are of great importance and can be replicated by using the standard equipment provided in a 'geometry toolbox' carried by students in high schools. The author hopes that the results proved in this paper, in conjunction with the two constructions from the above-mentioned book, would provide high school students an appreciation of the celebrated theorem of Pythagoras. The diagrams that accompany this document are based on the free software GeoGebra. The author formally acknowledges his indebtedness to the creators of this free software at the end of this document.

  5. Three consecutive almost squares

    OpenAIRE

    Rouse, Jeremy; Yang, Yilin

    2015-01-01

    Given a positive integer $n$, we let ${\\rm sfp}(n)$ denote the squarefree part of $n$. We determine all positive integers $n$ for which $\\max \\{ {\\rm sfp}(n), {\\rm sfp}(n+1), {\\rm sfp}(n+2) \\} \\leq 150$ by relating the problem to finding integral points on elliptic curves. We also prove that there are infinitely many $n$ for which \\[ \\max \\{ {\\rm sfp}(n), {\\rm sfp}(n+1), {\\rm sfp}(n+2) \\} < n^{1/3}. \\

  6. Deformation analysis with Total Least Squares

    Directory of Open Access Journals (Sweden)

    M. Acar

    2006-01-01

    Full Text Available Deformation analysis is one of the main research fields in geodesy. Deformation analysis process comprises measurement and analysis phases. Measurements can be collected using several techniques. The output of the evaluation of the measurements is mainly point positions. In the deformation analysis phase, the coordinate changes in the point positions are investigated. Several models or approaches can be employed for the analysis. One approach is based on a Helmert or similarity coordinate transformation where the displacements and the respective covariance matrix are transformed into a unique datum. Traditionally a Least Squares (LS technique is used for the transformation procedure. Another approach that could be introduced as an alternative methodology is the Total Least Squares (TLS that is considerably a new approach in geodetic applications. In this study, in order to determine point displacements, 3-D coordinate transformations based on the Helmert transformation model were carried out individually by the Least Squares (LS and the Total Least Squares (TLS, respectively. The data used in this study was collected by GPS technique in a landslide area located nearby Istanbul. The results obtained from these two approaches have been compared.

  7. Bthere or be Square:

    DEFF Research Database (Denmark)

    Eriksson, E.; Ludvigsen, Martin; Lykke-Olesen, Andreas

    2006-01-01

    of the workshop was to accomplish an expanded notion and awareness of some of the aspects of the city environment that are invisible or unnoticeable. We claim that the Bthere method increases awareness of a richer full scale context, and points to an alternative approach to user involvement in the design process.......In this paper we describe the Bthere method aiming to increase the context awareness among designers. The method and a workshop scenario will be presented, as well as the results and evaluation from that. Based on the methodology from contextual and participatory design, the paper describes...

  8. A simplex method for the orbit determination of maneuvering satellites

    Science.gov (United States)

    Chen, JianRong; Li, JunFeng; Wang, XiJing; Zhu, Jun; Wang, DanNa

    2018-02-01

    A simplex method of orbit determination (SMOD) is presented to solve the problem of orbit determination for maneuvering satellites subject to small and continuous thrust. The objective function is established as the sum of the nth powers of the observation errors based on global positioning satellite (GPS) data. The convergence behavior of the proposed method is analyzed using a range of initial orbital parameter errors and n values to ensure the rapid and accurate convergence of the SMOD. For an uncontrolled satellite, the orbit obtained by the SMOD provides a position error compared with GPS data that is commensurate with that obtained by the least squares technique. For low Earth orbit satellite control, the precision of the acceleration produced by a small pulse thrust is less than 0.1% compared with the calibrated value. The orbit obtained by the SMOD is also compared with weak GPS data for a geostationary Earth orbit satellite over several days. The results show that the position accuracy is within 12.0 m. The working efficiency of the electric propulsion is about 67% compared with the designed value. The analyses provide the guidance for subsequent satellite control. The method is suitable for orbit determination of maneuvering satellites subject to small and continuous thrust.

  9. Herpes Simplex Virus type 2 Infection among Females in Enugu ...

    African Journals Online (AJOL)

    BACKGROUND: Herpes simplex virus type 2 infection is life long with manifestation in a small proportion of those infected. It has presented public health concern because of its progressively increasing prevalence which some authorities say is of epidemic proportion in developing countries. Herpes simplex virus type 2 has ...

  10. On refinement of the unit simplex using regular simplices

    NARCIS (Netherlands)

    G.-Tóth, B.; Hendrix, E.M.T.; Casado, L.G.; García, I.

    2016-01-01

    A natural way to define branching in branch and bound (B&B) for blending problems is bisection. The consequence of using bisection is that partition sets are in general irregular. The question is how to use regular simplices in the refinement of the unit simplex. A regular simplex with fixed

  11. Experiments with Simplex ACE: dealing with highly variable targets

    Science.gov (United States)

    Ziemann, Amanda; Theiler, James; Ientilucci, Emmett

    2017-05-01

    We investigate a constrained subspace detector that models the target spectrum as a positive linear combination of multiple reference spectra. This construction permits the input of a large number of target reference spectra, which enables us to go after even highly variable targets without being overwhelmed by false alarms. This constrained basis approach led to the derivation of both the simplex adaptive matched filter (Simplex AMF) and simplex adaptive cosine estimator (Simplex ACE) detectors. Our primary interest is in Simplex ACE, and as such, the experiments in this paper focus on evaluating the robustness of Simplex ACE (with Simplex AMF included for comparison). We present results using large spectral libraries implanted into real hyperspectral data, and compare the performance of our simplex detectors against their traditional subspace detector counterparts. In addition to a large (i.e., several hundred spectra) target library, we induce further target variability by implanting subpixel targets with both added noise and scaled illumination. As a corollary, we also show that in the limit as the target subspace approaches the image space, Subspace AMF becomes the RX anomaly detector.

  12. Operculum syndrome: unusual feature of herpes simplex encephalitis

    NARCIS (Netherlands)

    van der Poel, J. C.; Haenggeli, C. A.; Overweg-Plandsoen, W. C.

    1995-01-01

    Herpes simplex encephalitis in adults and young patients carries a high mortality and morbidity. Its presentation may be nonspecific, sometimes hampering early diagnosis. Two young children are reported with herpes simplex encephalitis in whom the operculum syndrome was an outstanding feature. This

  13. Herpes simplex type 1 pneumonitis and acute respiratory distress syndrome in a patient with chronic lymphatic leukemia: a case report.

    Science.gov (United States)

    Luginbuehl, Miriam; Imhof, Alexander; Klarer, Alexander

    2017-11-23

    Pulmonary pathogenicity of herpes simplex virus type 1 in patients in intensive care without classic immunosuppression as well as the necessity of antiviral treatment in the case of herpes simplex virus detection in respiratory specimens in these patients is controversial. We present a case of acute respiratory distress syndrome in a patient with stable chronic lymphatic leukemia not requiring treatment, in whom we diagnosed herpes simplex virus type 1 bronchopneumonitis based on herpes simplex virus type 1 detection in bronchoalveolar lavage fluid and clinical response to antiviral treatment. A 72-year-old white man presented with symptoms of lower respiratory tract infection. His medical history was significant for chronic lymphatic leukemia, which had been stable without treatment, arterial hypertension, multiple squamous cell carcinomas of the scalp, and alcohol overuse. Community-acquired pneumonia was suspected and appropriate broad-spectrum antibacterial treatment was initiated. Within a few hours, rapid respiratory deterioration led to cardiac arrest. He was successfully resuscitated, but developed acute respiratory distress syndrome. Furthermore, he remained febrile and inflammation markers remained elevated despite antibacterial treatment. Polymerase chain reaction from bronchoalveolar lavage fluid and viral culture from tracheobronchial secretions tested positive for herpes simplex virus type 1. We initiated antiviral treatment with acyclovir. Concomitantly we further escalated the antibacterial treatment, although no bacterial pathogen had been isolated at any point. Defervescence occurred rapidly and his C-reactive protein and leukocyte levels decreased. He was successfully weaned from mechanical ventilation, transferred to the ward, and eventually discharged to home. Herpes simplex virus should be considered a cause for lower respiratory tract infection in critically ill patients, especially in the setting of an underlying disease.

  14. Automated interpretation of 3D laserscanned point clouds for plant organ segmentation.

    Science.gov (United States)

    Wahabzada, Mirwaes; Paulus, Stefan; Kersting, Kristian; Mahlein, Anne-Katrin

    2015-08-08

    Plant organ segmentation from 3D point clouds is a relevant task for plant phenotyping and plant growth observation. Automated solutions are required to increase the efficiency of recent high-throughput plant phenotyping pipelines. However, plant geometrical properties vary with time, among observation scales and different plant types. The main objective of the present research is to develop a fully automated, fast and reliable data driven approach for plant organ segmentation. The automated segmentation of plant organs using unsupervised, clustering methods is crucial in cases where the goal is to get fast insights into the data or no labeled data is available or costly to achieve. For this we propose and compare data driven approaches that are easy-to-realize and make the use of standard algorithms possible. Since normalized histograms, acquired from 3D point clouds, can be seen as samples from a probability simplex, we propose to map the data from the simplex space into Euclidean space using Aitchisons log ratio transformation, or into the positive quadrant of the unit sphere using square root transformation. This, in turn, paves the way to a wide range of commonly used analysis techniques that are based on measuring the similarities between data points using Euclidean distance. We investigate the performance of the resulting approaches in the practical context of grouping 3D point clouds and demonstrate empirically that they lead to clustering results with high accuracy for monocotyledonous and dicotyledonous plant species with diverse shoot architecture. An automated segmentation of 3D point clouds is demonstrated in the present work. Within seconds first insights into plant data can be deviated - even from non-labelled data. This approach is applicable to different plant species with high accuracy. The analysis cascade can be implemented in future high-throughput phenotyping scenarios and will support the evaluation of the performance of different plant

  15. Management of herpes simplex virus epithelial keratitis.

    Science.gov (United States)

    Roozbahani, Mehdi; Hammersmith, Kristin M

    2018-04-24

    To review recent advancements in the management of herpes simplex virus (HSV) epithelial keratitis. Trifluridine eye drop, acyclovir (ACV) ointment, ganciclovir gel, and oral ACV are still the main therapeutic agents. Cryopreserved amniotic membrane has been recently used as an adjuvant treatment. Resistance to ACV has become a concerning issue. The animal models of HSV vaccine are able to reduce HSV keratitis. New antivirals are under development. Current cases of HSV epithelial keratitis are manageable with available medications, but new advancements are required to decrease disease burden in the future. HSV vaccine can be revolutionary.

  16. The nonabelian tensor square of a bieberbach group with ...

    African Journals Online (AJOL)

    The main objective of this paper is to compute the nonabelian tensor square of one Bieberbach group with elementary abelian 2-group point group of dimension three by using the computational method of the nonabelian tensor square for polycyclic groups. The finding of the computation showed that the nonabelian tensor ...

  17. Latin and Cross Latin Squares

    Science.gov (United States)

    Emanouilidis, Emanuel

    2008-01-01

    Latin squares were first introduced and studied by the famous mathematician Leonhard Euler in the 1700s. Through the years, Latin squares have been used in areas such as statistics, graph theory, coding theory, the generation of random numbers as well as in the design and analysis of experiments. Recently, with the international popularity of…

  18. Herpes simplex encephalitis in patients with cancer.

    Science.gov (United States)

    Graber, Jerome J; Rosenblum, Marc K; DeAngelis, Lisa M

    2011-11-01

    Case reports and animal models suggest that chemotherapy, corticosteroids and radiotherapy (RT) may increase the risk of herpes simplex encephalitis (HSE). We retrospectively examined cases of HSE at an academic hospital devoted to cancer care. Patients were identified by positive herpes simplex virus (HSV) polymerase chain reaction (PCR) in cerebrospinal fluid (CSF) or by brain pathology. There were seven patients with HSE over a 12 year period, four of whom had received cranial RT. During this time, a total of 997 patients were treated with cranial RT, suggesting a greater incidence than the expected risk of two to four cases per million people per year in the general population. Five patients had recently received chemotherapy and three were on dexamethasone. MRI findings were typical; four patients had bilateral anterior temporal lesions and three had unilateral-temporal lesions. Four patients had a normal CSF white blood cell count, three of whom had prior RT and dexamethasone. Four patients were positive for HSV-1, and two for HSV-2. One patient had a negative CSF PCR for HSV, but autopsy confirmed active HSE. Though still rare, the risk of HSE may be increased in patients with cancer, especially in those receiving cranial RT. MRI findings were typical, but CSF white blood cell count was normal in four patients and one had negative CSF testing, suggesting that CSF results may be misleading in this population.

  19. A mechanical interpretation of least squares fitting in 3D

    OpenAIRE

    Penne, Rudi

    2008-01-01

    We address the computation of the line that minimizes the sum of the least squared distances with respect to a given set of $n$ points in 3-space. This problem has a well known satisfying solution by means of PCA. We offer an alternative interpretation for this optimal line as the center of the screw motion that minimizes the sum of squared velocities in the given points. The numerical translation of this viewpoint is a generalized eigenproblem, where the total residue...

  20. Overlap Areas of a Square Box on a Square Mesh

    Science.gov (United States)

    2017-04-01

    ABSTRACT To aid in a data-reduction process, an algorithm was generated to calculate on a square mesh (elements with sides of length 2m) the area of... aid in a data-reduction process, an algorithm was generated to calculate on a square mesh (elements with sides of length 2m) the area of overlap for...an official Department of the Army position unless so designated by other authorized documents. Citation of manufacturer’s or trade names does not

  1. Matching fields and lattice points of simplices

    OpenAIRE

    Loho, Georg; Smith, Ben

    2018-01-01

    We show that the Chow covectors of a linkage matching field define a bijection of lattice points and we demonstrate how one can recover the linkage matching field from this bijection. This resolves two open questions from Sturmfels & Zelevinsky (1993) on linkage matching fields. For this, we give an explicit construction that associates a bipartite incidence graph of an ordered partition of a common set to all lattice points in a dilated simplex. Given a triangulation of a product of two simp...

  2. Some existence problems regarding partial Latin squares

    OpenAIRE

    Aryapoor, Masood

    2014-01-01

    Latin squares are interesting combinatorial objects with many applications. When working with Latin squares, one is sometimes led to deal with partial Latin squares, a generalization of Latin squares. One of the problems regarding partial Latin square and with applications to Latin squares is whether a partial Latin square with a given set of conditions exists. The goal of this article is to introduce some problems of this kind and answer some existence questions regarding partial Latin squares

  3. Fluent Aphasia From Herpes Simplex Encephalitis

    Directory of Open Access Journals (Sweden)

    Fariba Yadegari

    2006-09-01

    Full Text Available The present case report introduces a patient with fluent aphasia, anterograde amnesia and anosmia due to herpes simplex encephalitis after her first delivery. The left medial temporal lobe was one of the main areas involved. On aphasia testing she showed severe anomia on both confrontation and free recall, agraphia, alexia, repetition disorder and some auditory comprehension impairments. Therapy was focused on the following issues: phonological output lexicon , using graphemes as a source of reestablishing phonological representation; describing pictures to reinforce free recall and self-cuing word retrieval strategies; sequencing the events for language memory reinforcement, etc. Results showed improvement in confrontational naming, free recall, correct responses without priming, writing on dictation, spontaneous writing and reading comprehension.

  4. MRI findings of herpes simplex encephalitis

    International Nuclear Information System (INIS)

    Yoon, Hye Kyung; Chang, Kee Hyun; Han, Moon Hee; Kim, In One; Cha, Sang Hoon; Kim, Sang Joon

    1992-01-01

    We retrospectively analyzed the MR findings of 12 patients with herpes simplex encephalitis (HSE) (8 months - 64 years old). MR imaging was performed on either a 0.5T (6 patients) or 2.0T (6 patients) superconducting unit with spin echo pulse sequences. The most common and characteristic MR finding consisted of non-hemorrhagic lesions in the cortices of the temporal lobes(12), and insular(6), either bilateral(7) or unilateral(5). The frontal lobe and cingulate gyrus were involved in 4 and 2 patients respectively. Petechial hemorrhage was found in 3 patients. Non-hemorrhagic lesions were shown as high signal intensities on proton and T2WI, and iso- or low signal intensities on T1WI. In conclusion, MR imaging findings described above appear to be characteristic of HSE and were found to be extremely valuable in the diagnosis of HSE

  5. Firmiana simplex: a potential source of antimicrobials

    International Nuclear Information System (INIS)

    Ajab, M.; Khan, K.M.

    2014-01-01

    he antimicrobial activity of leaves and bark extracts of Firmiana simplex (L.) W. F. Wight was evaluated by using zone of inhibition and MIC assay. It is revealed from the results that plant showed tremendous antibacterial and antifungal potential. The most significant results were obtained from petroleum ether extracts of leaves against Pseudomonas aeruginosa (78 ± 1.1 mm) and Aspergillus niger (66 ± 0.2 mm). The leaves and bark extracts have produced significant results against Klebsiella pneumoniae within the range of 0 ± 0 to 67 ± 1.5 mm. It is revealed that extracts macerated in water have failed to exhibit any potential against all test organisms employed. The lowest (significant) MIC value of bark extract was 0.023 ± 0.04 at 0.7 mg/ml and leaf extract was 0.030 ± 0.02 at 0.9 mg/ml. (author)

  6. Simplex and triplex polymerase chain reaction (PCR) for ...

    African Journals Online (AJOL)

    Simplex and triplex polymerase chain reaction (PCR) for identification of three medically important Candida species. Nabil S Harmal, Alireza Khodavandi, Mohammed A Alshawsh, Farida Jamal, Zamberi Sekawi, Ng Kee Peng, Pei Pei Chong ...

  7. Evasion of Early Antiviral Responses by Herpes Simplex Viruses

    OpenAIRE

    Suazo, Paula A.; Ibañez, Francisco J.; Retamal-Díaz, Angello R.; Paz-Fiblas, Marysol V.; Bueno, Susan M.; Kalergis, Alexis M.; González, Pablo A.

    2015-01-01

    Besides overcoming physical constraints, such as extreme temperatures, reduced humidity, elevated pressure, and natural predators, human pathogens further need to overcome an arsenal of antimicrobial components evolved by the host to limit infection, replication and optimally, reinfection. Herpes simplex virus-1 (HSV-1) and herpes simplex virus-2 (HSV-2) infect humans at a high frequency and persist within the host for life by establishing latency in neurons. To gain access to these cells, he...

  8. Methylenedioxy- and methoxyflavones from Melicope coodeana syn. Euodia simplex

    DEFF Research Database (Denmark)

    Simonsen, Henrik Toft; Larsen, Michael D; Nielsen, Merete W

    2002-01-01

    Three new natural products, 3,8-dimethoxy-5,7-dihydroxy-3',4'-methylenedioxyflavone, 3,6,8-trimethoxy-5,7-dihydroxy-3',4'-methylenedioxyflavone and 3,6,8,3',4'-pentamethoxy-5,7-dihydroxyflavone were isolated from Melicope coodeana syn. Euodia simplex (Rutaceae) along with 3,6,3'-trimethoxy-5,7,4'...... of the genus Melicope, and the present findings support the recent transfer of Euodia simplex to Melicope....

  9. Nonparametric hypothesis testing for equality of means on the simplex

    OpenAIRE

    Tsagris, Michail; Preston, Simon; Wood, Andrew T. A.

    2016-01-01

    In the context of data that lie on the simplex, we investigate use of empirical and exponential empirical likelihood, and Hotelling and James statistics, to test the null hypothesis of equal population means based on two independent samples. We perform an extensive numerical study using data simulated from various distributions on the simplex. The results, taken together with practical considerations regarding implementation, support the use of bootstrap-calibrated James statis...

  10. Double Simplex - Visualizing particles and their interactions seminar

    CERN Multimedia

    CERN. Geneva HR-RFA

    2006-01-01

    The double simplex is a new way to envision the particles and interactions through a three-dimensional construction intended to serve as an invitation to narrative and a spur to curiosity. My goal is to represent what we know is true, what we hope might be true, and what we don't know. Constructing the double simplex expresses the spirit of play, of successive approximations, that animates the way scientists work.

  11. Characterisation of potential novel allergens in the fish parasite Anisakis simplex

    Directory of Open Access Journals (Sweden)

    Christiane Kruse Fæste

    2014-09-01

    Full Text Available The parasitic nematode Anisakis simplex occurs in fish stocks in temperate seas. A. simplex contamination of fish products is unsavoury and a health concern considering human infection with live larvae (anisakiasis and allergic reactions to anisakid proteins in seafood. Protein extracts of A. simplex produce complex band patterns in gel electrophoresis and IgE-immunostaining. In the present study potential allergens have been characterised using sera from A. simplex-sensitised patients and proteome data obtained by mass spectrometry. A. simplex proteins were homologous to allergens in other nematodes, insects, and shellfish indicating cross-reactivity. Characteristic marker peptides for relevant A. simplex proteins were described.

  12. A Solution to Weighted Sums of Squares as a Square

    Science.gov (United States)

    Withers, Christopher S.; Nadarajah, Saralees

    2012-01-01

    For n = 1, 2, ... , we give a solution (x[subscript 1], ... , x[subscript n], N) to the Diophantine integer equation [image omitted]. Our solution has N of the form n!, in contrast to other solutions in the literature that are extensions of Euler's solution for N, a sum of squares. More generally, for given n and given integer weights m[subscript…

  13. Sums of squares of integers

    CERN Document Server

    Moreno, Carlos J

    2005-01-01

    Introduction Prerequisites Outline of Chapters 2 - 8 Elementary Methods Introduction Some Lemmas Two Fundamental Identities Euler's Recurrence for Sigma(n)More Identities Sums of Two Squares Sums of Four Squares Still More Identities Sums of Three Squares An Alternate Method Sums of Polygonal Numbers Exercises Bernoulli Numbers Overview Definition of the Bernoulli Numbers The Euler-MacLaurin Sum Formula The Riemann Zeta Function Signs of Bernoulli Numbers Alternate The von Staudt-Clausen Theorem Congruences of Voronoi and Kummer Irregular Primes Fractional Parts of Bernoulli Numbers Exercises Examples of Modular Forms Introduction An Example of Jacobi and Smith An Example of Ramanujan and Mordell An Example of Wilton: t (n) Modulo 23 An Example of Hamburger Exercises Hecke's Theory of Modular FormsIntroduction Modular Group ? and its Subgroup ? 0 (N) Fundamental Domains For ? and ? 0 (N) Integral Modular Forms Modular Forms of Type Mk(? 0(N);chi) and Euler-Poincare series Hecke Operators Dirichlet Series and ...

  14. Sudoku Squares as Experimental Designs

    Indian Academy of Sciences (India)

    Home; Journals; Resonance – Journal of Science Education; Volume 20; Issue 9. Sudoku Squares as Experimental Designs. Jyotirmoy Sarkar Bikas K Sinha. General Article Volume 20 Issue 9 September 2015 pp 788-802. Fulltext. Click here to view fulltext PDF. Permanent link:

  15. Computer tomography in herpes simplex encephalitis

    Energy Technology Data Exchange (ETDEWEB)

    Hacke, W.; Zeumer, H.

    1981-10-01

    The CT findings in six patients with confirmed herpes simplex encephalitis were analysed and compared with the literature. Thirty-four examinations were performed, 27 within the first 14 days of the illness. The early findings show three characteristic features: The CT may be entirely normal up to the fourth day. Consistent with clinical and E.E.G. findings there then develops a hypodense temporal lesion which, even at this stage, acts as an expanding lesion in half the patients. Between the sixth and eighth day there is frequently involvement of the contra-lateral temporal lobe, not as a continuation, but as a new lesion. At the same time, or after several days, there is involvement of the basal portions of the frontal lobes. In this late phase there may be necrosis in the basal ganglia, thalamus or other parts of the brain. The CT findings in this late phase are uniform and characteristic of the disease. For early diagnosis and treatment the early clinical, electrophysiological and neuro-radiological findings are important. A normal CT scan two days after the onset of clinical symptoms may be regarded as significant.

  16. Computer tomography in herpes simplex encephalitis

    International Nuclear Information System (INIS)

    Hacke, W.; Zeumer, H.

    1981-01-01

    The CT findings in six patients with confirmed herpes simplex encephalitis were analysed and compared with the literature. Thirty-four examinations were performed, 27 within the first 14 days of the illness. The early findings show three characteristic features: The CT may be entirely normal up to the fourth day. Consistent with clinical and E.E.G. findings there then develops a hypodense temporal lesion which, even at this stage, acts as an expanding lesion in half the patients. Between the sixth and eighth day there is frequently involvement of the contra-lateral temporal lobe, not as a continuation, but as a new lesion. At the same time, or after several days, there is involvement of the basal portions of the frontal lobes. In this late phase there may be necrosis in the basal ganglia, thalamus or other parts of the brain. The CT findings in this late phase are uniform and characteristic of the disease. For early diagnosis and treatment the early clinical, electrophysiological and neuro-radiological findings are important. A normal CT scan two days after the onset of clinical symptoms may be regarded as significant. (orig.) [de

  17. Early rehabilitation results in a child who developed herpes simplex encephalitis.

    Science.gov (United States)

    Toy, Seyma; Ozdemir, Filiz; Kızılay, Fatma; Ersoy, Yuksel; Apaydın, Hakan

    2017-01-01

    In this case, a 4-year-old girl was admitted to the emergency service with the complaints of a sudden onset of fever, shortness of breath, jerking motions of the hands and feet and a sliding mouth. Her condition deteriorated, and she was kept under observation in the intensive care unit for 6 days. The Glasgow Coma Score of the patient was 1. Lumbar puncture revealed a white blood cell count of 0 and cerebrospinal fluid was positive for herpes simplex virus 1 and 2. Antiviral therapy was administered for 14 days. One month earlier, the patient had experienced a herpes labialis infection, which suggested herpes simplex encephalitis (HSE). Cranial magnetic resonance imaging indicated significant bilateral cerebral ischemic changes, which also supported suspicion of HSE. After antiviral treatment, the patient was referred to the department of physical therapy and rehabilitation. The Functional Independence Measure for Children (WeeFIM) scale was used to evaluate the patient. A 30-session rehabilitation program based on the Bobath concept of neurodevelopmental therapy was implemented. Before the treatment, the WeeFIM score was 20 points, and at its conclusion, the score was 88 points. The patient began to walk without limitation and the choreoathetosis was almost completely corrected. The patient was discharged with medical treatment and a home-based exercise training program.

  18. Early rehabilitation results in a child who developed herpes simplex encephalitis

    Science.gov (United States)

    Toy, Seyma; Ozdemir, Filiz; Kızılay, Fatma; Ersoy, Yuksel; Apaydın, Hakan

    2017-01-01

    In this case, a 4-year-old girl was admitted to the emergency service with the complaints of a sudden onset of fever, shortness of breath, jerking motions of the hands and feet and a sliding mouth. Her condition deteriorated, and she was kept under observation in the intensive care unit for 6 days. The Glasgow Coma Score of the patient was 1. Lumbar puncture revealed a white blood cell count of 0 and cerebrospinal fluid was positive for herpes simplex virus 1 and 2. Antiviral therapy was administered for 14 days. One month earlier, the patient had experienced a herpes labialis infection, which suggested herpes simplex encephalitis (HSE). Cranial magnetic resonance imaging indicated significant bilateral cerebral ischemic changes, which also supported suspicion of HSE. After antiviral treatment, the patient was referred to the department of physical therapy and rehabilitation. The Functional Independence Measure for Children (WeeFIM) scale was used to evaluate the patient. A 30-session rehabilitation program based on the Bobath concept of neurodevelopmental therapy was implemented. Before the treatment, the WeeFIM score was 20 points, and at its conclusion, the score was 88 points. The patient began to walk without limitation and the choreoathetosis was almost completely corrected. The patient was discharged with medical treatment and a home-based exercise training program. PMID:29270579

  19. The generalization of the exterior square of a Bieberbach group

    Science.gov (United States)

    Masri, Rohaidah; Hassim, Hazzirah Izzati Mat; Sarmin, Nor Haniza; Ali, Nor Muhainiah Mohd; Idrus, Nor'ashiqin Mohd

    2014-06-01

    The exterior square of a group is one of the homological functors which were originated in the homotopy theory. Meanwhile, a Bieberbach group is a torsion free crystallographic group. A Bieberbach group with cyclic point group of order two, C2, of dimension n can be defined as the direct product of that group of the smallest dimension with a free abelian group. Using the group presentation and commutator generating sequence, the exterior square of a Bieberbach group with point group C2 of dimension n is computed.

  20. Adult herpes simplex encephalitis: fifteen years' experience.

    Science.gov (United States)

    Riera-Mestre, Antoni; Gubieras, Laura; Martínez-Yelamos, Sergio; Cabellos, Carmen; Fernández-Viladrich, Pedro

    2009-03-01

    Herpes simplex encephalitis (HSE) is the most frequent cause of sporadic necrotizing encephalitis in adults. The aim of this study is to describe the characteristics of HSE and the factors influencing its outcome. Retrospective study of patients diagnosed with HSE in a tertiary care teaching hospital over a 15-year period. Diagnosis was based on a consistent clinical profile for HSE, plus either a PCR-positive CSF HSV study or consistent brain neuroimaging findings. Patients were divided into 2 groups according to the modified Rankin Scale: good outcome (Grades =3). Thirty-five patients were included. Mean age was 53.9 years. More than half presented febricula or fever, headache, disorientation, behavioral changes, decreased level of consciousness, or neurological deficit. CSF glucose concentration was normal in all patients and WBC count was normal in 8 (23%). PCR for HSV was positive in 92% and cranial MRI was suggestive of HSE in 100% of patients. Mortality was 8.6%. In relation to outcome, age (OR=1.079; 95% CI, 1.023-1.138) and serum albumin level at admission (OR=0.87; 95% CI, 0.794-0.954) were independent prognostic factors at discharge. At 6 months, days of fever after initiation of acyclovir therapy (OR=1.219; 95% CI, 1.046-1.422) and serum albumin level at admission (OR=0.917; 95% CI, 0.87-0.967) were independent prognostic factors. Normal brain MRI or detection of low CSF glucose concentration requires consideration of diagnoses other than HSE. Age, serum albumin level at admission, and days of fever after initiation of acyclovir therapy were independent prognostic factors of the disease.

  1. Retargeting Strategies for Oncolytic Herpes Simplex Viruses.

    Science.gov (United States)

    Campadelli-Fiume, Gabriella; Petrovic, Biljana; Leoni, Valerio; Gianni, Tatiana; Avitabile, Elisa; Casiraghi, Costanza; Gatta, Valentina

    2016-02-26

    Most of the oncolytic herpes simplex viruses (HSVs) exhibit a high safety profile achieved through attenuation. They carry defects in virulence proteins that antagonize host cell response to the virus, including innate response, apoptosis, authophagy, and depend on tumor cell proliferation. They grow robustly in cancer cells, provided that these are deficient in host cell responses, which is often the case. To overcome the attenuation limits, a strategy is to render the virus highly cancer-specific, e.g., by retargeting their tropism to cancer-specific receptors, and detargeting from natural receptors. The target we selected is HER-2, overexpressed in breast, ovarian and other cancers. Entry of wt-HSV requires the essential glycoproteins gD, gH/gL and gB. Here, we reviewed that oncolytic HSV retargeting was achieved through modifications in gD: the addition of a single-chain antibody (scFv) to HER-2 coupled with appropriate deletions to remove part of the natural receptors' binding sites. Recently, we showed that also gH/gL can be a retargeting tool. The insertion of an scFv to HER-2 at the gH N-terminus, coupled with deletions in gD, led to a recombinant capable to use HER-2 as the sole receptor. The retargeted oncolytic HSVs can be administered systemically by means of carrier cells-forcedly-infected mesenchymal stem cells. Altogether, the retargeted oncolytic HSVs are highly cancer-specific and their replication is not dependent on intrinsic defects of the tumor cells. They might be further modified to express immunomodulatory molecules.

  2. The simplex method for nonlinear sliding mode control

    Directory of Open Access Journals (Sweden)

    Bartolini G.

    1998-01-01

    Full Text Available General nonlinear control systems described by ordinary differential equations with a prescribed sliding manifold are considered. A method of designing a feedback control law such that the state variable fulfills the sliding condition in finite time is based on the construction of a suitable simplex of vectors in the tangent space of the manifold. The convergence of the method is proved under an obtuse angle condition and a way to build the required simplex is indicated. An example of engineering interest is presented.

  3. Latin squares and their applications

    CERN Document Server

    Keedwell, A Donald

    2015-01-01

    Latin Squares and Their Applications Second edition offers a long-awaited update and reissue of this seminal account of the subject. The revision retains foundational, original material from the frequently-cited 1974 volume but is completely updated throughout. As with the earlier version, the author hopes to take the reader 'from the beginnings of the subject to the frontiers of research'. By omitting a few topics which are no longer of current interest, the book expands upon active and emerging areas. Also, the present state of knowledge regarding the 73 then-unsolved problems given at the

  4. Renaming Zagreb Streets and Squares

    Directory of Open Access Journals (Sweden)

    Jelena Stanić

    2009-06-01

    Full Text Available The paper deals with changes in street names in the city of Zagreb. Taking the Lower Town (Donji grad city area as an example, the first part of the paper analyses diachronic street name changes commencing from the systematic naming of streets in 1878. Analysis of official changes in street names throughout Zagreb’s history resulted in categorisation of five periods of ideologically motivated naming/name-changing: 1. the Croatia modernisation period, when the first official naming was put into effect, with a marked tendency towards politicisation and nationalisation of the urban landscape; 2. the period of the Kingdom of the Serbs, Croatians and Slovenians/Yugoslavia, when symbols of the new monarchy, the idea of the fellowship of the Southern Slavs, Slavenophilism and the pro-Slavic geopolitical orientation were incorporated into the street names, and when the national idea was highly evident and remained so in that process; 3. the period of the NDH, the Independent State of Croatia, with decanonisation of the tokens of the Yugoslavian monarchy and the Southern Slavic orientation, and reference to the Ustashi and the German Nazi and Italian Fascist movement; 4. the period of Socialism, embedding the ideals and heroes of the workers’ movement and the War of National Liberation into the canonical system; and, 5. the period following the democratic changes in 1990, when almost all the signs of Socialism and the Communist/Antifascist struggle were erased, with the prominent presence of a process of installing new references to early national culture and historical tradition. The closing part of the paper deals with public discussions connected with the selection of a location for a square to bear the name of the first president of independent Croatia, Franjo Tuđman. Analysis of these public polemics shows two opposing discourses: the right-wing political option, which supports a central position for the square and considers the chosen area to

  5. Relationships between melting point and boiling point of organic compounds

    Energy Technology Data Exchange (ETDEWEB)

    Yalkowsky, S.H.; Krzyzaniak, J.F.; Myrdal, P.B. (Univ. of Arizona, Tucson, AZ (United States). College of Pharmacy)

    1994-07-01

    Relationships between melting point and boiling point are shown to be dependent upon the molecular symmetry number and a modified count of the total number of atoms in the molecule. Using the above relationships, the boiling and melting points of nearly 1,000 non-hydrogen-bonding organic compounds have been correlated. The correlations for boiling point and melting point have root mean square errors of 28 and 36 C, respectively.

  6. Quantum mechanical streamlines. I - Square potential barrier

    Science.gov (United States)

    Hirschfelder, J. O.; Christoph, A. C.; Palke, W. E.

    1974-01-01

    Exact numerical calculations are made for scattering of quantum mechanical particles hitting a square two-dimensional potential barrier (an exact analog of the Goos-Haenchen optical experiments). Quantum mechanical streamlines are plotted and found to be smooth and continuous, to have continuous first derivatives even through the classical forbidden region, and to form quantized vortices around each of the nodal points. A comparison is made between the present numerical calculations and the stationary wave approximation, and good agreement is found between both the Goos-Haenchen shifts and the reflection coefficients. The time-independent Schroedinger equation for real wavefunctions is reduced to solving a nonlinear first-order partial differential equation, leading to a generalization of the Prager-Hirschfelder perturbation scheme. Implications of the hydrodynamical formulation of quantum mechanics are discussed, and cases are cited where quantum and classical mechanical motions are identical.

  7. Multiples least-squares reverse time migration

    KAUST Repository

    Zhang, Dongliang

    2013-01-01

    To enhance the image quality, we propose multiples least-squares reverse time migration (MLSRTM) that transforms each hydrophone into a virtual point source with a time history equal to that of the recorded data. Since each recorded trace is treated as a virtual source, knowledge of the source wavelet is not required. Numerical tests on synthetic data for the Sigsbee2B model and field data from Gulf of Mexico show that MLSRTM can improve the image quality by removing artifacts, balancing amplitudes, and suppressing crosstalk compared to standard migration of the free-surface multiples. The potential liability of this method is that multiples require several roundtrips between the reflector and the free surface, so that high frequencies in the multiples are attenuated compared to the primary reflections. This can lead to lower resolution in the migration image compared to that computed from primaries.

  8. Improving immunogenicity and efficacy of vaccines for genital herpes containing herpes simplex virus glycoprotein D.

    Science.gov (United States)

    Awasthi, Sita; Shaw, Carolyn; Friedman, Harvey

    2014-12-01

    No vaccines are approved for prevention or treatment of genital herpes. The focus of genital herpes vaccine trials has been on prevention using herpes simplex virus type 2 (HSV-2) glycoprotein D (gD2) alone or combined with glycoprotein B. These prevention trials did not achieve their primary end points. However, subset analyses reported some positive outcomes in each study. The most recent trial was the Herpevac Trial for Women that used gD2 with monophosphoryl lipid A and alum as adjuvants in herpes simplex virus type 1 (HSV-1) and HSV-2 seronegative women. Unexpectedly, the vaccine prevented genital disease by HSV-1 but not HSV-2. Currently, HSV-1 causes more first episodes of genital herpes than HSV-2, highlighting the importance of protecting against HSV-1. The scientific community is conflicted between abandoning vaccine efforts that include gD2 and building upon the partial successes of previous trials. We favor building upon success and present approaches to improve outcomes of gD2-based subunit antigen vaccines.

  9. Replication-Competent Controlled Herpes Simplex Virus.

    Science.gov (United States)

    Bloom, David C; Feller, Joyce; McAnany, Peterjon; Vilaboa, Nuria; Voellmy, Richard

    2015-10-01

    We present the development and characterization of a replication-competent controlled herpes simplex virus 1 (HSV-1). Replication-essential ICP4 and ICP8 genes of HSV-1 wild-type strain 17syn+ were brought under the control of a dually responsive gene switch. The gene switch comprises (i) a transactivator that is activated by a narrow class of antiprogestins, including mifepristone and ulipristal, and whose expression is mediated by a promoter cassette that comprises an HSP70B promoter and a transactivator-responsive promoter and (ii) transactivator-responsive promoters that drive the ICP4 and ICP8 genes. Single-step growth experiments in different cell lines demonstrated that replication of the recombinant virus, HSV-GS3, is strictly dependent on an activating treatment consisting of administration of a supraphysiological heat dose in the presence of an antiprogestin. The replication-competent controlled virus replicates with an efficiency approaching that of the wild-type virus from which it was derived. Essentially no replication occurs in the absence of activating treatment or if HSV-GS3-infected cells are exposed only to heat or antiprogestin. These findings were corroborated by measurements of amounts of viral DNA and transcripts of the regulated ICP4 gene and the glycoprotein C (gC) late gene, which was not regulated. Similar findings were made in experiments with a mouse footpad infection model. The alphaherpesviruses have long been considered vectors for recombinant vaccines and oncolytic therapies. The traditional approach uses vector backbones containing attenuating mutations that restrict replication to ensure safety. The shortcoming of this approach is that the attenuating mutations tend to limit both the immune presentation and oncolytic properties of these vectors. HSV-GS3 represents a novel type of vector that, when activated, replicates with the efficiency of a nonattenuated virus and whose safety is derived from deliberate, stringent regulation of

  10. Pore Structures in the Biomineralized Byssus of Anomia simplex

    DEFF Research Database (Denmark)

    Frølich, Simon; Leemreize, Hanna; Thomsen, Jesper Skovhus

    2016-01-01

    Underwater attachment is a significant challenge, for which we have no good general solutions in our technology. Yet, a number of biological organisms have evolved solutions to this problem. One intriguing approach to underwater attachment is that of the marine bivalve mussel Anomia simplex...

  11. Effect of potassium simplex optimization medium (KSOM) and ...

    African Journals Online (AJOL)

    In this study, we produced cloned transgenic dairy goat based on dairy goat ear skin fibroblast as donor cells for nuclear transfer (NT), which were modified by ... culture medium, potassium simplex optimization medium (KSOM) and tissue culture medium (TCM 199), or different classification of NT embryos (48 h after fusion).

  12. Herpes Simplex Virus Type-2 and Human Immunodeficiency Virus ...

    African Journals Online (AJOL)

    Objectives: To estimate the seroprevalence of Herpes Simplex Type 2 (HSV-2) and its association with Human Immunodeficiency Virus type 1 (HIV-1) infections in rural Kilimanjaro Tanzania. Methods: A cross-sectional survey was conducted in Oria village from March to June 2005 involving all individuals aged 15-44 years ...

  13. Von Willebrand Factor Gene Variants Associate with Herpes simplex Encephalitis

    Czech Academy of Sciences Publication Activity Database

    Abdelmagid, N.; Bereczky-Veress, B.; Atanur, S.; Musilová, Alena; Zídek, Václav; Saba, L.; Warnecke, A.; Khademi, M.; Studahl, M.; Aurelius, E.; Hjalmarsson, A.; Garcia-Dias, A.; Denis, C. V.; Bergström, T.; Sköldenberg, B.; Kockum, I.; Aitman, T.; Hübner, N.; Olsson, T.; Pravenec, Michal; Diez, M.

    2016-01-01

    Roč. 11, č. 5 (2016), e0155832 E-ISSN 1932-6203 R&D Projects: GA MŠk(CZ) 7E10067; GA MŠk(CZ) LL1204 Institutional support: RVO:67985823 Keywords : Von Willebrand Factor gene * Herpes simplex encephalitis * rat * humans Subject RIV: EB - Genetics ; Molecular Biology Impact factor: 2.806, year: 2016

  14. On the Mutation Rate of Herpes Simplex Virus Type 1

    OpenAIRE

    Drake, John W.; Hwang, Charles B. C.

    2005-01-01

    All seven DNA-based microbes for which carefully established mutation rates and mutational spectra were previously available displayed a genomic mutation rate in the neighborhood of 0.003 per chromosome replication. The pathogenic mammalian DNA virus herpes simplex type 1 has an estimated genomic mutation rate compatible with that value.

  15. Monoclonal antibodies to Herpes Simplex Virus Type 2

    International Nuclear Information System (INIS)

    McLean-Pieper, C.S.

    1982-01-01

    In this thesis the production and characterisation of monoclonal antibodies to Herpes Simplex Virus Type 2 is described. The development of a suitable radioimmunoassay for the detection of anti-HSV-2 antibodies, and the selection of an optimal immunisation schedule, is given. Three assay systems are described and their reliability and sensitivity compared. (Auth.)

  16. Herpes simplex encephalitis | Ladapo | Nigerian Journal of Clinical ...

    African Journals Online (AJOL)

    Nigerian Journal of Clinical Practice. Journal Home · ABOUT · Advanced Search · Current Issue · Archives · Journal Home > Vol 14, No 1 (2011) >. Log in or Register to get access to full text downloads. Username, Password, Remember me, or Register. Herpes simplex encephalitis. TA Ladapo, E Oyenusi, FEA Lesi ...

  17. Serological profiles of Herpes simplex virus type 2 among HIV ...

    African Journals Online (AJOL)

    Herpes simplex virus type-2 (HSV-2) is the major cause of genital ulcer diseases (GUD) consequently a significant factor for the acquisition and transmission of human immunodeficiency virus (HIV). Despite its importance there is paucity of data regarding the magnitude of HSV-2 in non-HIV infected population in ...

  18. Pityriasis Lichenoides Chronica Associated with Herpes Simplex Virus Type 2

    Directory of Open Access Journals (Sweden)

    Antonio Javier González Rodríguez

    2012-01-01

    Full Text Available Introduction. Pityriasis lichenoides is a rare, acquired spectrum of skin conditions of an unknown etiology. Case Report. A 28-year-old man presented with recurrent outbreaks of herpes simplex virus associated with the onset of red-to-brown maculopapules located predominantly in trunk in each recurrence. Positive serologies to herpes simplex virus type 2 were detected. Histopathological examination of one of the lesions was consistent with a diagnosis of pityriasis lichenoides chronica. Discussion. Pityriasis lichenoides is a rare cutaneous entity of an unknown cause which includes different clinical presentations. A number of infectious agents have been implicated based on the clustering of multiple outbreaks and elevated serum titers to specific pathogens (human immunodeficiency virus, cytomegalovirus, Epstein-Barr virus, Toxoplasma gondii, and herpes simplex virus. In our patient, resolution of cutaneous lesions coincided with the administration of antiviral drugs and clinical improvement in each genital herpes recurrence. In conclusion, we report a case in which cutaneous lesions of pityriasis lichenoides chronica and a herpes simplex virus-type 2-mediated disease have evolved concomitantly.

  19. Determination of human herpes simplex virus in clear cerebrospinal ...

    African Journals Online (AJOL)

    The purpose of this study was to test CSF obtained from different regions of Rwanda for herpes simplex viruses (HSV) type 1 and 2 using a commercial multiplex PCR kit. CSF samples were obtained from patients with clinical suspicion of meningitis and encephalitis which may be caused by different microorganisms ...

  20. Two step culture for production of recombinant herpes simplex virus ...

    African Journals Online (AJOL)

    Herpes simplex virus type 2 (HSV-2) was the major cause of genital herpes in humans. The HSV-2 glycoprotein D (gD2) had been proved to be a potentially effective vaccine for treatment of genital herpes. The present study was to develop a two step culture to express the recombinant gD2 protein using the immobilized ...

  1. On the Complexity of Optimization over the Standard Simplex

    NARCIS (Netherlands)

    de Klerk, E.; den Hertog, D.; Elfadul, G.E.E.

    2005-01-01

    We review complexity results for minimizing polynomials over the standard simplex and unit hypercube.In addition, we show that there exists a polynomial time approximation scheme (PTAS) for minimizing Lipschitz continuous functions and functions with uniformly bounded Hessians over the standard

  2. Polymerase chain reaction for detection of herpes simplex virus encephalitis.

    Science.gov (United States)

    Aslanzadeh, J; Skiest, D J

    1994-06-01

    A patient with herpes simplex virus encephalitis is described. The polymerase chain reaction (PCR) was used to confirm the diagnosis in cerebrospinal fluid. PCR allows the rapid diagnosis of many infectious organisms, such as HSV, in which prompt diagnosis is essential.

  3. Polymerase chain reaction for detection of herpes simplex virus encephalitis.

    OpenAIRE

    Aslanzadeh, J; Skiest, D J

    1994-01-01

    A patient with herpes simplex virus encephalitis is described. The polymerase chain reaction (PCR) was used to confirm the diagnosis in cerebrospinal fluid. PCR allows the rapid diagnosis of many infectious organisms, such as HSV, in which prompt diagnosis is essential.

  4. Prevalence of Herpes Simplex Virus Antibodies in Dental Students.

    Science.gov (United States)

    Rodu, Brad; And Others

    1992-01-01

    A study of 125 sophomore preclinical dental students found that these young professionals, because of having a low prevalence of herpes simplex virus (HSV) antibodies, are at risk for acquiring a primary HSV infection when treating HSV positive patients and should take precautions to avoid virus transmission. (MSE)

  5. Herpes Simplex Virus Infections of the Central Nervous System.

    Science.gov (United States)

    Whitley, Richard J

    2015-12-01

    This article summarizes knowledge of herpes simplex virus (HSV) infections of the central nervous system (CNS). Disease pathogenesis, detection of DNA polymerase chain reaction (PCR) for diagnosis and prognosis, and approaches to therapy warrant consideration. HSV infection of the CNS is one of few treatable viral diseases. Clinical trials indicate that outcome following neonatal herpes simplex virus type 2 (HSV-2) infections of the CNS is significantly improved when 6 months of suppressive oral acyclovir therapy follows IV antiviral therapy. In contrast, herpes simplex virus type 1 (HSV-1) infections of the brain do not benefit from extended oral antiviral therapy. This implies a difference in disease pathogenesis between HSV-2 and HSV-1 infections of the brain. PCR detection of viral DNA in the CSF is the gold standard for diagnosis. Use of PCR is now being adopted as a basis for determining the duration of therapy in the newborn. HSV infections are among the most common encountered by humans; seropositivity occurs in 50% to 90% of adult populations. Herpes simplex encephalitis, however, is an uncommon result of this infection. Since no new antiviral drugs have been introduced in nearly 3 decades, much effort has focused on learning how to better use acyclovir and how to use existing databases to establish earlier diagnosis.

  6. Application of the simplex method of linear programming model to ...

    African Journals Online (AJOL)

    This work discussed how the simplex method of linear programming could be used to maximize the profit of any business firm using Saclux Paint Company as a case study. It equally elucidated the effect variation in the optimal result obtained from linear programming model, will have on any given firm. It was demonstrated ...

  7. Pathogenesis of herpes simplex virus infections of the cornea

    NARCIS (Netherlands)

    J. Maertzdorf (Jeroen)

    2002-01-01

    textabstractThe identification of human herpes virus (HHV) infections can be traced back to ancient Greece where Herpes simplex vims (HSV) infections in humans were first documented. Hippocrates used the word "herpes", meaning to creep or crawl, to describe spreading skin lesions. Although the

  8. Computed tomography in young children with herpes simplex virus encephalitis

    International Nuclear Information System (INIS)

    Sugimoto, T.; Woo, M.; Okazaki, H.; Nishida, N.; Hara, T.; Yasuhara, A.; Kasahara, M.; Kobayashi, Y.

    1985-01-01

    Computed tomographic (CT) scans were obtained from eight infants and young children with herpes simplex virus encephalitis. In two cases the initial scan showed diffuse edematous changes as a mass effect without laterality. Unilateral localized low attenuation in the initial scan was evident 4 days after the onset in one patient, and high attenuation in the initial scan appeared on the 6th day in another patient, but in general, it was not possible to establish an early diagnosis of herpes simplex virus encephalitis from CT scan. In the longitudinal study the calcification with ventriculomegaly appeared in 3 of 5 survivors, and gyriform calcification in 2 of 3 patients, respectively. The appearance of multicystic encephalomalacia was evident in one patient 6 months after the onset of neonatal herpes simplex encephalitis. It is shown that the CT findings of neonates and young children with herpes simplex encephalitis are different from those of older children and adults, and the importance of longitudinal CT studies was stressed in clarifying the pathophysiology of the central nervous system involvement in survivors. (orig.)

  9. Recurrent herpes simplex virus keratitis in a young Nigerian male ...

    African Journals Online (AJOL)

    A comprehensive case history and slit lamp examination revealed the presence of dendritic ulcer in the left eye of the patient. The patient was diagnosed with recurrent herpes simplex virus keratitis. An aggressive multi-treatment plan involving the use of antiviral, antibiotics, and anti inflammatory drugs was administered to ...

  10. Sequencing and phylogenetic analysis of Herpes simplex virus type ...

    African Journals Online (AJOL)

    momtaz

    2012-01-19

    Jan 19, 2012 ... Herpes simplex virus type 2 (HSV-2) is the main cause of recurrent genital infection (Slomka, 1996). Most infections are asymptomatic. The virus establishes latent infection in the local ganglia and is reactivated and shed frequently. Antibodies to HSV infections become detectable in serum samples (Koelle ...

  11. Madhava, Gregory, Leibnitz, and Sums of Two Squares

    Indian Academy of Sciences (India)

    IAS Admin

    Keywords. Gregory–Leibnitz series, lattice points, sums of two squares,. Gauss circle problem. Shailesh Shirali heads the. Community Math Centre in Rishi Valley School and works in the field of teacher education. He is the author of many books and articles in mathemat- ics, written for interested students in the age range.

  12. Evolutionary origins of human herpes simplex viruses 1 and 2.

    Science.gov (United States)

    Wertheim, Joel O; Smith, Martin D; Smith, Davey M; Scheffler, Konrad; Kosakovsky Pond, Sergei L

    2014-09-01

    Herpesviruses have been infecting and codiverging with their vertebrate hosts for hundreds of millions of years. The primate simplex viruses exemplify this pattern of virus-host codivergence, at a minimum, as far back as the most recent common ancestor of New World monkeys, Old World monkeys, and apes. Humans are the only primate species known to be infected with two distinct herpes simplex viruses: HSV-1 and HSV-2. Human herpes simplex viruses are ubiquitous, with over two-thirds of the human population infected by at least one virus. Here, we investigated whether the additional human simplex virus is the result of ancient viral lineage duplication or cross-species transmission. We found that standard phylogenetic models of nucleotide substitution are inadequate for distinguishing among these competing hypotheses; the extent of synonymous substitutions causes a substantial underestimation of the lengths of some of the branches in the phylogeny, consistent with observations in other viruses (e.g., avian influenza, Ebola, and coronaviruses). To more accurately estimate ancient viral divergence times, we applied a branch-site random effects likelihood model of molecular evolution that allows the strength of natural selection to vary across both the viral phylogeny and the gene alignment. This selection-informed model favored a scenario in which HSV-1 is the result of ancient codivergence and HSV-2 arose from a cross-species transmission event from the ancestor of modern chimpanzees to an extinct Homo precursor of modern humans, around 1.6 Ma. These results provide a new framework for understanding human herpes simplex virus evolution and demonstrate the importance of using selection-informed models of sequence evolution when investigating viral origin hypotheses. © The Author 2014. Published by Oxford University Press on behalf of the Society for Molecular Biology and Evolution. All rights reserved. For permissions, please e-mail: journals.permissions@oup.com.

  13. Squares in arithmetic progression over cubic fields

    OpenAIRE

    Bremner, Andrew; Siksek, Samir

    2015-01-01

    Euler showed that there can be no more than three integer squares in arithmetic progression. In quadratic number fields, Xarles has shown that there can be arithmetic progressions of five squares, but not of six. Here, we prove that there are no cubic number fields which contain five squares in arithmetic progression.

  14. [Clinical, epidemiological, and etiological studies of adult aseptic meningitis: a report of 12 cases of herpes simplex meningitis, and a comparison with cases of herpes simplex encephalitis].

    Science.gov (United States)

    Himeno, Takahiro; Shiga, Yuji; Takeshima, Shinichi; Tachiyama, Keisuke; Kamimura, Teppei; Kono, Ryuhei; Takemaru, Makoto; Takeshita, Jun; Shimoe, Yutaka; Kuriyama, Masaru

    2018-01-26

    We treated 437 cases of adult aseptic meningitis and 12 cases (including 2 recurrent patients; age, 31.8 ± 8.9 years; 7 females) of herpes simplex meningitis from 2004 to 2016. The incidence rate of adult herpes simplex meningitis in the cases with aseptic meningitis was 2.7%. One patient was admitted during treatment of genital herpes, but no association was observed between genital herpes and herpes simplex meningitis in the other cases. The diagnoses were confirmed in all cases as the cerebrospinal fluid (CSF) was positive for herpes simplex virus (HSV)-DNA. For diagnosis confirmation, the DNA test was useful after 2-7 days following initial disease onset. Among other types of aseptic meningitis, the patients with herpes simplex meningitis showed relatively high white blood cell counts and relatively high CSF protein and high CSF cell counts. CSF cells showed mononuclear cell dominance from the initial stage of the disease. During same period, we also experienced 12 cases of herpes simplex encephalitis and 21 cases of non-hepatic acute limbic encephalitis. Notably, the patients with herpes simplex meningitis were younger and their CSF protein and cells counts were higher than those of the patients with herpes simplex encephalitis.

  15. Estimating Frequency by Interpolation Using Least Squares Support Vector Regression

    Directory of Open Access Journals (Sweden)

    Changwei Ma

    2015-01-01

    Full Text Available Discrete Fourier transform- (DFT- based maximum likelihood (ML algorithm is an important part of single sinusoid frequency estimation. As signal to noise ratio (SNR increases and is above the threshold value, it will lie very close to Cramer-Rao lower bound (CRLB, which is dependent on the number of DFT points. However, its mean square error (MSE performance is directly proportional to its calculation cost. As a modified version of support vector regression (SVR, least squares SVR (LS-SVR can not only still keep excellent capabilities for generalizing and fitting but also exhibit lower computational complexity. In this paper, therefore, LS-SVR is employed to interpolate on Fourier coefficients of received signals and attain high frequency estimation accuracy. Our results show that the proposed algorithm can make a good compromise between calculation cost and MSE performance under the assumption that the sample size, number of DFT points, and resampling points are already known.

  16. Electric potential of a uniformly charged square on its plane

    Science.gov (United States)

    Ciftja, Orion

    2011-11-01

    We consider a recent paper by Aghamohammadi (2011 Eur. J. Phys. 32 633) focused on the calculation of the electric potential due to a uniformly charged square. The author of this paper applied a dimensional analysis approach to study the electric potential created by a uniformly charged square sheet on its plane. In this letter, we point out that several exact results presented in the above-mentioned paper can be obtained in a very transparent way by an alternative method we had earlier developed to study the same problem.

  17. Multifractal behaviour of Т-simplex lattice

    Indian Academy of Sciences (India)

    Sanjay Kumar, D Giri and Sujata Krishna each of the lattice points of the Цth order map by the entire Цth order map. Each of the resulting Т points is connected to one of the lines connecting the originalЦth order vertices. The fractal and spectral dimensions of this lattice are given by: = ln(Т) ln 2. (1) and. = 2 ln(Т) ln(Т + 2). (2).

  18. Square pulse linear transformer driver

    Science.gov (United States)

    Kim, A. A.; Mazarakis, M. G.; Sinebryukhov, V. A.; Volkov, S. N.; Kondratiev, S. S.; Alexeenko, V. M.; Bayol, F.; Demol, G.; Stygar, W. A.

    2012-04-01

    The linear transformer driver (LTD) technological approach can result in relatively compact devices that can deliver fast, high current, and high-voltage pulses straight out of the LTD cavity without any complicated pulse forming and pulse compression network. Through multistage inductively insulated voltage adders, the output pulse, increased in voltage amplitude, can be applied directly to the load. The usual LTD architecture [A. A. Kim, M. G. Mazarakis, V. A. Sinebryukhov, B. M. Kovalchuk, V. A. Vizir, S. N Volkov, F. Bayol, A. N. Bastrikov, V. G. Durakov, S. V. Frolov, V. M. Alexeenko, D. H. McDaniel, W. E. Fowler, K. LeCheen, C. Olson, W. A. Stygar, K. W. Struve, J. Porter, and R. M. Gilgenbach, Phys. Rev. ST Accel. Beams 12, 050402 (2009)PRABFM1098-440210.1103/PhysRevSTAB.12.050402; M. G. Mazarakis, W. E. Fowler, A. A. Kim, V. A. Sinebryukhov, S. T. Rogowski, R. A. Sharpe, D. H. McDaniel, C. L. Olson, J. L. Porter, K. W. Struve, W. A. Stygar, and J. R. Woodworth, Phys. Rev. ST Accel. Beams 12, 050401 (2009)PRABFM1098-440210.1103/PhysRevSTAB.12.050401] provides sine shaped output pulses that may not be well suited for some applications like z-pinch drivers, flash radiography, high power microwaves, etc. A more suitable power pulse would have a flat or trapezoidal (rising or falling) top. In this paper, we present the design and first test results of an LTD cavity that generates such a type of output pulse by including within its circular array a number of third harmonic bricks in addition to the main bricks. A voltage adder made out of a square pulse cavity linear array will produce the same shape output pulses provided that the timing of each cavity is synchronized with the propagation of the electromagnetic pulse.

  19. Lepeophtheirus simplex sp. n., a caligid copepod (Siphonostomatoida) parasitic on "botete" (bullseye puffer, Sphoeroides annulatus) in Sinaloa, Mexico.

    Science.gov (United States)

    Ho, J S; Gómez, S; Fajer-Avila, E

    2001-01-01

    A new species of caligid copepod, Lepeophtheirus simplex sp. n., parasitic on bullseye puffer, Sphoeroides annulatus (Jenyns) in Sinaloa, Mexico is described. The new species is distinguished from its congeners by the possession of (1) a maxillule with simple dentiform process; (2) a sternal furca with sharply pointed, curved tines; (3) a 2-segmented exopod of leg 3 with simple, slender spine on proximal segment; (4) a 3-segmented exopod of leg 4 with a long proximal, outer spine; and (5) the terminal claw of male antenna with a large, tridentate, medial protuberance.

  20. Testing the gravitational inverse-square law

    International Nuclear Information System (INIS)

    Adelberger, Eric; Heckel, B.; Hoyle, C.D.

    2005-01-01

    If the universe contains more than three spatial dimensions, as many physicists believe, our current laws of gravity should break down at small distances. When Isaac Newton realized that the acceleration of the Moon as it orbited around the Earth could be related to the acceleration of an apple as it fell to the ground, it was the first time that two seemingly unrelated physical phenomena had been 'unified'. The quest to unify all the forces of nature is one that still keeps physicists busy today. Newton showed that the gravitational attraction between two point bodies is proportional to the product of their masses and inversely proportional to the square of the distance between them. Newton's theory, which assumes that the gravitational force acts instantaneously, remained essentially unchallenged for roughly two centuries until Einstein proposed the general theory of relativity in 1915. Einstein's radical new theory made gravity consistent with the two basic ideas of relativity: the world is 4D - the three directions of space combined with time - and no physical effect can travel faster than light. The theory of general relativity states that gravity is not a force in the usual sense but a consequence of the curvature of this space-time produced by mass or energy. However, in the limit of low velocities and weak gravitational fields, Einstein's theory still predicts that the gravitational force between two point objects obeys an inverse-square law. One of the outstanding challenges in physics is to finish what Newton started and achieve the ultimate 'grand unification' - to unify gravity with the other three fundamental forces (the electromagnetic force, and the strong and weak nuclear forces) into a single quantum theory. In string theory - one of the leading candidates for an ultimate theory - the fundamental entities of nature are 1D strings and higher-dimensional objects called 'branes', rather than the point-like particles we are familiar with. String

  1. NFκB-mediated activation of the cellular FUT3, 5 and 6 gene cluster by herpes simplex virus type 1.

    Science.gov (United States)

    Nordén, Rickard; Samuelsson, Ebba; Nyström, Kristina

    2017-11-01

    Herpes simplex virus type 1 has the ability to induce expression of a human gene cluster located on chromosome 19 upon infection. This gene cluster contains three fucosyltransferases (encoded by FUT3, FUT5 and FUT6) with the ability to add a fucose to an N-acetylglucosamine residue. Little is known regarding the transcriptional activation of these three genes in human cells. Intriguingly, herpes simplex virus type 1 activates all three genes simultaneously during infection, a situation not observed in uninfected tissue, pointing towards a virus specific mechanism for transcriptional activation. The aim of this study was to define the underlying mechanism for the herpes simplex virus type 1 activation of FUT3, FUT5 and FUT6 transcription. The transcriptional activation of the FUT-gene cluster on chromosome 19 in fibroblasts was specific, not involving adjacent genes. Moreover, inhibition of NFκB signaling through panepoxydone treatment significantly decreased the induction of FUT3, FUT5 and FUT6 transcriptional activation, as did siRNA targeting of p65, in herpes simplex virus type 1 infected fibroblasts. NFκB and p65 signaling appears to play an important role in the regulation of FUT3, FUT5 and FUT6 transcriptional activation by herpes simplex virus type 1 although additional, unidentified, viral factors might account for part of the mechanism as direct interferon mediated stimulation of NFκB was not sufficient to induce the fucosyltransferase encoding gene cluster in uninfected cells. © The Author 2017. Published by Oxford University Press. All rights reserved. For permissions, please e-mail: journals.permissions@oup.com.

  2. Multisource Least-squares Reverse Time Migration

    KAUST Repository

    Dai, Wei

    2012-12-01

    Least-squares migration has been shown to be able to produce high quality migration images, but its computational cost is considered to be too high for practical imaging. In this dissertation, a multisource least-squares reverse time migration algorithm (LSRTM) is proposed to increase by up to 10 times the computational efficiency by utilizing the blended sources processing technique. There are three main chapters in this dissertation. In Chapter 2, the multisource LSRTM algorithm is implemented with random time-shift and random source polarity encoding functions. Numerical tests on the 2D HESS VTI data show that the multisource LSRTM algorithm suppresses migration artifacts, balances the amplitudes, improves image resolution, and reduces crosstalk noise associated with the blended shot gathers. For this example, multisource LSRTM is about three times faster than the conventional RTM method. For the 3D example of the SEG/EAGE salt model, with comparable computational cost, multisource LSRTM produces images with more accurate amplitudes, better spatial resolution, and fewer migration artifacts compared to conventional RTM. The empirical results suggest that the multisource LSRTM can produce more accurate reflectivity images than conventional RTM does with similar or less computational cost. The caveat is that LSRTM image is sensitive to large errors in the migration velocity model. In Chapter 3, the multisource LSRTM algorithm is implemented with frequency selection encoding strategy and applied to marine streamer data, for which traditional random encoding functions are not applicable. The frequency-selection encoding functions are delta functions in the frequency domain, so that all the encoded shots have unique non-overlapping frequency content. Therefore, the receivers can distinguish the wavefield from each shot according to the frequencies. With the frequency-selection encoding method, the computational efficiency of LSRTM is increased so that its cost is

  3. Square pulse linear transformer driver

    Directory of Open Access Journals (Sweden)

    A. A. Kim

    2012-04-01

    Full Text Available The linear transformer driver (LTD technological approach can result in relatively compact devices that can deliver fast, high current, and high-voltage pulses straight out of the LTD cavity without any complicated pulse forming and pulse compression network. Through multistage inductively insulated voltage adders, the output pulse, increased in voltage amplitude, can be applied directly to the load. The usual LTD architecture [A. A. Kim, M. G. Mazarakis, V. A. Sinebryukhov, B. M. Kovalchuk, V. A. Vizir, S. N Volkov, F. Bayol, A. N. Bastrikov, V. G. Durakov, S. V. Frolov, V. M. Alexeenko, D. H. McDaniel, W. E. Fowler, K. LeCheen, C. Olson, W. A. Stygar, K. W. Struve, J. Porter, and R. M. Gilgenbach, Phys. Rev. ST Accel. Beams 12, 050402 (2009PRABFM1098-440210.1103/PhysRevSTAB.12.050402; M. G. Mazarakis, W. E. Fowler, A. A. Kim, V. A. Sinebryukhov, S. T. Rogowski, R. A. Sharpe, D. H. McDaniel, C. L. Olson, J. L. Porter, K. W. Struve, W. A. Stygar, and J. R. Woodworth, Phys. Rev. ST Accel. Beams 12, 050401 (2009PRABFM1098-440210.1103/PhysRevSTAB.12.050401] provides sine shaped output pulses that may not be well suited for some applications like z-pinch drivers, flash radiography, high power microwaves, etc. A more suitable power pulse would have a flat or trapezoidal (rising or falling top. In this paper, we present the design and first test results of an LTD cavity that generates such a type of output pulse by including within its circular array a number of third harmonic bricks in addition to the main bricks. A voltage adder made out of a square pulse cavity linear array will produce the same shape output pulses provided that the timing of each cavity is synchronized with the propagation of the electromagnetic pulse.

  4. Acute and recurrent herpes simplex in several strains of mice.

    Science.gov (United States)

    Harbour, D A; Hill, T J; Blyth, W A

    1981-07-01

    Acute and recurrent herpes simplex was studied after infection in the ear of two outbred and five inbred strains of mice. In all strains tested there was clinical evidence of infection, and a proportion of the mice became latently infected in the cervical ganglia. Six weeks after infection, when attempts were made to induce recurrent desease by stripping the ears of the mice with cellophange tape, a proportion of animals of each strain developed recurrent disease, characterized by erythema in the skin. At monthly intervals thereafter, the ears were stripped again and, on each occasion, a proportion of the animals developed recurrent disease, with the exception of Balb/c mice. The different reaction of Balb/c and other inbred strains might prove useful in studies on the mechanism of control of recurrent herpes simplex.

  5. Herpes Simplex Mastitis: Case Report and Review of the Literature

    Directory of Open Access Journals (Sweden)

    Holly Brown

    1996-01-01

    Full Text Available The most common sites of herpes simplex virus (HSV infection are around the oral cavity and the genitalia. However, HSV can infect any skin or mucous membrane surface. One uncommon site of HSV infection is the breast. Reports of herpetic breast infections are predominantly cases of transmission from a systemically HSV-infected neonate to the mother during breast-feeding. A review of the literature identified only six reports suggesting HSV breast lesions acquired by means other than through an infected infant. Of these, only one report suggests HSV transmission to the breast from a male sexual partner. A second case of clinically unsuspected symptomatic herpes mastitis presumably acquired from sexual contact in a 46-year-old woman is presented. Herpes simplex type 1 was isolated by using polymerase chain reaction and restriction fragment length polymerization techniques. The purpose of this report is to alert physicians to HSV mastitis.

  6. Optimization of Pressurizer Based on Genetic-Simplex Algorithm

    Energy Technology Data Exchange (ETDEWEB)

    Wang, Cheng; Yan, Chang Qi; Wang, Jian Jun [Harbin Engineering University, Harbin (China)

    2014-08-15

    Pressurizer is one of key components in nuclear power system. It's important to control the dimension in the design of pressurizer through optimization techniques. In this work, a mathematic model of a vertical electric heating pressurizer was established. A new Genetic-Simplex Algorithm (GSA) that combines genetic algorithm and simplex algorithm was developed to enhance the searching ability, and the comparison among modified and original algorithms is conducted by calculating the benchmark function. Furthermore, the optimization design of pressurizer, taking minimization of volume and net weight as objectives, was carried out considering thermal-hydraulic and geometric constraints through GSA. The results indicate that the mathematical model is agreeable for the pressurizer and the new algorithm is more effective than the traditional genetic algorithm. The optimization design shows obvious validity and can provide guidance for real engineering design.

  7. Herpes Simplex Encephalitis Presenting with Normal CSF Analysis

    International Nuclear Information System (INIS)

    Ahmed, R.; Kiani, I. G.; Shah, F.; Rehman, R. N.; Haq, M. E.

    2013-01-01

    A 28 years old female presented with headache, fever, altered sensorium and right side weakness for one week. She was febrile and drowsy with right sided hemiplegia and papilledema. Tuberculous or bacterial meningitis, tuberculoma and abscess were at the top of the diagnosis list followed by Herpes simplex meningo-encephalitis (HSE). MRI showed abnormal signal intensity of left temporal lobe without significant post-contrast enhancement and midline shift. CSF examination was normal, gram stain and Ziehl-Neelsen stain showed no micro-organism, or acid fast bacilli. CSF for MTB PCR was negative. PCR DNA for Herpes simplex 1 on CSF was detected. Acyclovir was started and the patient was discharged after full recovery. A high index of suspicion is required for HSE diagnosis in Pakistan where other infections predominantly affect the brain and HSE may be overlooked as a potential diagnosis. (author)

  8. Optimization of Pressurizer Based on Genetic-Simplex Algorithm

    International Nuclear Information System (INIS)

    Wang, Cheng; Yan, Chang Qi; Wang, Jian Jun

    2014-01-01

    Pressurizer is one of key components in nuclear power system. It's important to control the dimension in the design of pressurizer through optimization techniques. In this work, a mathematic model of a vertical electric heating pressurizer was established. A new Genetic-Simplex Algorithm (GSA) that combines genetic algorithm and simplex algorithm was developed to enhance the searching ability, and the comparison among modified and original algorithms is conducted by calculating the benchmark function. Furthermore, the optimization design of pressurizer, taking minimization of volume and net weight as objectives, was carried out considering thermal-hydraulic and geometric constraints through GSA. The results indicate that the mathematical model is agreeable for the pressurizer and the new algorithm is more effective than the traditional genetic algorithm. The optimization design shows obvious validity and can provide guidance for real engineering design

  9. Occupational Therapy for a Boy Patient with Herpes Simplex Encephalitis

    OpenAIRE

    豊森, 千史; 佐藤, 陽子

    1993-01-01

    A boy aged three years and two months had been affected with Herpes simplex encephalitis before five months and was referred to our occupational therapeutic division. He showed stranger reaction and separation anxiety. Additonally, he had some developmental disorders in the areas of self-care skills, cognition and communication proficiency. Besides these, he felt little interest in people or things, and had a short attention span. After treatment of occupational therapy for two years and ten ...

  10. Herpes simplex virus bronchiolitis in a cannabis user

    Directory of Open Access Journals (Sweden)

    Daniel H. Libraty

    2014-01-01

    Full Text Available Herpes simplex virus (HSV lower respiratory tract infections in adults are uncommon. We present a case of HSV bronchiolitis and pneumonitis in an immunocompetent individual, likely linked to chronic habitual marijuana use and a herpetic orolabial ulcer. The case serves as a reminder to consider HSV as a potential unusual cause of lower respiratory tract infection/inflammation in individuals with chronic habitual marijuana use.

  11. Needs" in Patients of Neurodermatitis Circumscripta (Lichen Simplex Chronicus

    Directory of Open Access Journals (Sweden)

    Bhushan Kumar

    1980-01-01

    Full Text Available Psychological needs of 20 adult male patients with neurodermatitis circumscripta(lichen simplex chronicus and 50 matched controls were studied using ten TAT cards.Need affiliation(100% need achievement (95%,need superiority (55% and need dominance(40% were the predominant needs.In contrast to the findings in other studies where aggressive needs were high in patients with atopic dermatitis our study showed that it was a prominent need in only one patient with neurodermatitis circumscripta.

  12. Contrast enhancement of the gyri in herpes simplex encephalitis

    International Nuclear Information System (INIS)

    Schumacher, K.A.; Langer, M.; Langer, R.

    1982-01-01

    A case of herpes simplex encephalitis was examined by computer tomography. Both cerebral hemispheres showed contrast enhancement of the gyri. The cause of this is considered. The increased contrast medium accumulation in the affected areas is probably due to the marked vascular proliferation which can be demonstrated anatomically, and to the rapid escape of contrast from the capillaries into the interstitial spaces. The findings of other authors, which differ somewhat, are discussed. (orig.) [de

  13. Expression of varicella-zoster virus and herpes simplex virus in normal human trigeminal ganglia

    International Nuclear Information System (INIS)

    Vafai, A.; Wellish, M.; Devlin, M.; Gilden, D.H.; Murray, R.S.

    1988-01-01

    Lysates of radiolabeled explants from four human trigeminal ganglia were immunoprecipitated with antibodies to varicella-zoster virus (VZV) and to herpes simplex virus. Both herpes simplex virus- and VZV-specific proteins were detected in lysates of all four ganglia. Absence of reactivity in ganglion explants with monoclonal antibodies suggested that herpes simplex virus and VZV were not reactivated during the culture period. In situ hybridization studies demonstrated the presence of RNA transcripts from the VZV immediate early gene 63. This approach to the detection of herpes simplex virus and VZV expression in human ganglia should facilitate analysis of viral RNA and proteins in human sensory ganglia

  14. The complete mitochondrial genome of Vannella simplex (Amoebozoa, Discosea, Vannellida).

    Science.gov (United States)

    Bondarenko, Natalya; Glotova, Anna; Nassonova, Elena; Masharsky, Alexey; Kudryavtsev, Alexander; Smirnov, Alexey

    2018-04-01

    Vannella simplex (Amoebozoa, Discosea, Vannellida) is one of the commonest freshwater free-living lobose amoebae, known from many locations worldwide. In the present study, we describe the complete mitochondrial genome of this species. The circular mitochondrial DNA of V. simplex has 34,145öbp in length and contains 27 protein-coding genes, 2 ribosomal RNAs, 16 transfer RNAs and 4 open reading frames. Mitochondiral genome of V. simplex is one of the most gene compact due to overlapping genes and reduced intergenic space. It has much in common with its closest relative, mitochondrial genome of V. croatica GenBank number MF508648. In the same time, both of them show considerable differences in length and in gene order from the next close relative - that of Neoparamoeba pemaquidensis KX611830 (deposited as Paramoeba) and even more - from other sequenced amoebozoan mitochondrial genomes. The present study confirms the opinion that the level of synteny between the mitochondrial genomes across the entire Amoebozoa clade is low. More or less considerable similarity yet was found only between members of the same clade of the genera or family level, but hardly - among more distant lineages. Copyright © 2018 Elsevier GmbH. All rights reserved.

  15. MOTIVATION INTERNALIZATION AND SIMPLEX STRUCTURE IN SELF-DETERMINATION THEORY.

    Science.gov (United States)

    Ünlü, Ali; Dettweiler, Ulrich

    2015-12-01

    Self-determination theory, as proposed by Deci and Ryan, postulated different types of motivation regulation. As to the introjected and identified regulation of extrinsic motivation, their internalizations were described as "somewhat external" and "somewhat internal" and remained undetermined in the theory. This paper introduces a constrained regression analysis that allows these vaguely expressed motivations to be estimated in an "optimal" manner, in any given empirical context. The approach was even generalized and applied for simplex structure analysis in self-determination theory. The technique was exemplified with an empirical study comparing science teaching in a classical school class versus an expeditionary outdoor program. Based on a sample of 84 German pupils (43 girls, 41 boys, 10 to 12 years old), data were collected using the German version of the Academic Self-Regulation Questionnaire. The science-teaching format was seen to not influence the pupils' internalization of identified regulation. The internalization of introjected regulation differed and shifted more toward the external pole in the outdoor teaching format. The quantification approach supported the simplex structure of self-determination theory, whereas correlations may disconfirm the simplex structure.

  16. Seronegative Herpes simplex Associated Esophagogastric Ulcer after Liver Transplantation

    Directory of Open Access Journals (Sweden)

    Edouard Matevossian

    2008-03-01

    Full Text Available Herpes simplex infection is characterized by acute or subacute infection, often followed by a chronic carrier state. Consecutive recurrences may flare up if immunocompromise occurs. Herpes simplex associated esophagitis or duodenal ulcer have been reported in immunocompromised patients due to neoplasm, HIV/AIDS or therapeutically induced immune deficiency. Here we report the case of an HSV-DNA seronegative patient who developed grade III dysphagia 13 days after allogeneic liver transplantation. Endoscopy revealed an esophageal-gastric ulcer, and biopsy histopathology showed a distinct fibroplastic and capillary ulcer pattern highly suspicious for viral infection. Immunohistochemistry staining revealed a distinct nuclear positive anti-HSV reaction. Antiviral therapy with acyclovir and high-dose PPI led to a complete revision of clinical symptoms within 48 h. Repeat control endoscopy after 7 days showed complete healing of the former ulcer site at the gastroesophageal junction. Although the incidence of post-transplantation Herpes simplex induced gastroesophageal disease is low, the viral HSV ulcer may be included into a differential diagnosis if dysphagia occurs after transplantation even if HSV-DNA PCR is negative.

  17. Maximum likelihood decay curve fits by the simplex method

    International Nuclear Information System (INIS)

    Gregorich, K.E.

    1991-01-01

    A multicomponent decay curve analysis technique has been developed and incorporated into the decay curve fitting computer code, MLDS (maximum likelihood decay by the simplex method). The fitting criteria are based on the maximum likelihood technique for decay curves made up of time binned events. The probabilities used in the likelihood functions are based on the Poisson distribution, so decay curves constructed from a small number of events are treated correctly. A simple utility is included which allows the use of discrete event times, rather than time-binned data, to make maximum use of the decay information. The search for the maximum in the multidimensional likelihood surface for multi-component fits is performed by the simplex method, which makes the success of the iterative fits extremely insensitive to the initial values of the fit parameters and eliminates the problems of divergence. The simplex method also avoids the problem of programming the partial derivatives of the decay curves with respect to all the variable parameters, which makes the implementation of new types of decay curves straightforward. Any of the decay curve parameters can be fixed or allowed to vary. Asymmetric error limits for each of the free parameters, which do not consider the covariance of the other free parameters, are determined. A procedure is presented for determining the error limits which contain the associated covariances. The curve fitting procedure in MLDS can easily be adapted for fits to other curves with any functional form. (orig.)

  18. Evasion of Early Antiviral Responses by Herpes Simplex Viruses

    Directory of Open Access Journals (Sweden)

    Paula A. Suazo

    2015-01-01

    Full Text Available Besides overcoming physical constraints, such as extreme temperatures, reduced humidity, elevated pressure, and natural predators, human pathogens further need to overcome an arsenal of antimicrobial components evolved by the host to limit infection, replication and optimally, reinfection. Herpes simplex virus-1 (HSV-1 and herpes simplex virus-2 (HSV-2 infect humans at a high frequency and persist within the host for life by establishing latency in neurons. To gain access to these cells, herpes simplex viruses (HSVs must replicate and block immediate host antiviral responses elicited by epithelial cells and innate immune components early after infection. During these processes, infected and noninfected neighboring cells, as well as tissue-resident and patrolling immune cells, will sense viral components and cell-associated danger signals and secrete soluble mediators. While type-I interferons aim at limiting virus spread, cytokines and chemokines will modulate resident and incoming immune cells. In this paper, we discuss recent findings relative to the early steps taking place during HSV infection and replication. Further, we discuss how HSVs evade detection by host cells and the molecular mechanisms evolved by these viruses to circumvent early antiviral mechanisms, ultimately leading to neuron infection and the establishment of latency.

  19. Evasion of early antiviral responses by herpes simplex viruses.

    Science.gov (United States)

    Suazo, Paula A; Ibañez, Francisco J; Retamal-Díaz, Angello R; Paz-Fiblas, Marysol V; Bueno, Susan M; Kalergis, Alexis M; González, Pablo A

    2015-01-01

    Besides overcoming physical constraints, such as extreme temperatures, reduced humidity, elevated pressure, and natural predators, human pathogens further need to overcome an arsenal of antimicrobial components evolved by the host to limit infection, replication and optimally, reinfection. Herpes simplex virus-1 (HSV-1) and herpes simplex virus-2 (HSV-2) infect humans at a high frequency and persist within the host for life by establishing latency in neurons. To gain access to these cells, herpes simplex viruses (HSVs) must replicate and block immediate host antiviral responses elicited by epithelial cells and innate immune components early after infection. During these processes, infected and noninfected neighboring cells, as well as tissue-resident and patrolling immune cells, will sense viral components and cell-associated danger signals and secrete soluble mediators. While type-I interferons aim at limiting virus spread, cytokines and chemokines will modulate resident and incoming immune cells. In this paper, we discuss recent findings relative to the early steps taking place during HSV infection and replication. Further, we discuss how HSVs evade detection by host cells and the molecular mechanisms evolved by these viruses to circumvent early antiviral mechanisms, ultimately leading to neuron infection and the establishment of latency.

  20. Skeletonized Least Squares Wave Equation Migration

    KAUST Repository

    Zhan, Ge

    2010-10-17

    The theory for skeletonized least squares wave equation migration (LSM) is presented. The key idea is, for an assumed velocity model, the source‐side Green\\'s function and the geophone‐side Green\\'s function are computed by a numerical solution of the wave equation. Only the early‐arrivals of these Green\\'s functions are saved and skeletonized to form the migration Green\\'s function (MGF) by convolution. Then the migration image is obtained by a dot product between the recorded shot gathers and the MGF for every trial image point. The key to an efficient implementation of iterative LSM is that at each conjugate gradient iteration, the MGF is reused and no new finitedifference (FD) simulations are needed to get the updated migration image. It is believed that this procedure combined with phase‐encoded multi‐source technology will allow for the efficient computation of wave equation LSM images in less time than that of conventional reverse time migration (RTM).

  1. Weighted conditional least-squares estimation

    International Nuclear Information System (INIS)

    Booth, J.G.

    1987-01-01

    A two-stage estimation procedure is proposed that generalizes the concept of conditional least squares. The method is instead based upon the minimization of a weighted sum of squares, where the weights are inverses of estimated conditional variance terms. Some general conditions are given under which the estimators are consistent and jointly asymptotically normal. More specific details are given for ergodic Markov processes with stationary transition probabilities. A comparison is made with the ordinary conditional least-squares estimators for two simple branching processes with immigration. The relationship between weighted conditional least squares and other, more well-known, estimators is also investigated. In particular, it is shown that in many cases estimated generalized least-squares estimators can be obtained using the weighted conditional least-squares approach. Applications to stochastic compartmental models, and linear models with nested error structures are considered

  2. The Square Light Clock and Special Relativity

    Science.gov (United States)

    Galli, J. Ronald; Amiri, Farhang

    2012-01-01

    A thought experiment that includes a square light clock is similar to the traditional vertical light beam and mirror clock, except it is made up of four mirrors placed at a 45[degree] angle at each corner of a square of length L[subscript 0], shown in Fig. 1. Here we have shown the events as measured in the rest frame of the square light clock. By…

  3. Sets of Mutually Orthogonal Sudoku Latin Squares

    Science.gov (United States)

    Vis, Timothy; Petersen, Ryan M.

    2009-01-01

    A Latin square of order "n" is an "n" x "n" array using n symbols, such that each symbol appears exactly once in each row and column. A set of Latin squares is c ordered pairs of symbols appearing in the cells of the array are distinct. The popular puzzle Sudoku involves Latin squares with n = 9, along with the added condition that each of the 9…

  4. Power Efficient Division and Square Root Unit

    DEFF Research Database (Denmark)

    Liu, Wei; Nannarelli, Alberto

    2012-01-01

    Although division and square root are not frequent operations, most processors implement them in hardware to not compromise the overall performance. Two classes of algorithms implement division or square root: digit-recurrence and multiplicative (e.g., Newton-Raphson) algorithms. Previous work...... shows that division and square root units based on the digit-recurrence algorithm offer the best tradeoff delay-area-power. Moreover, the two operations can be combined in a single unit. Here, we present a radix-16 combined division and square root unit obtained by overlapping two radix-4 stages...

  5. The central subgroup of the nonabelian tensor square of Bieberbach ...

    African Journals Online (AJOL)

    A Bieberbach group with point group C2 xC2 is a free torsion crystallographic group. A central subgroup of a nonabelian tensor square of a group G, denoted by ∇(G) is a normal subgroup generated by generator g⊗g for all g∈G and essentially depends on the abelianization of the group. In this paper, the formula of the ...

  6. Nuclear Localization of the C1 Factor (Host Cell Factor) in Sensory Neurons Correlates with Reactivation of Herpes Simplex Virus from Latency

    Science.gov (United States)

    Kristie, Thomas M.; Vogel, Jodi L.; Sears, Amy E.

    1999-02-01

    After a primary infection, herpes simplex virus is maintained in a latent state in neurons of sensory ganglia until complex stimuli reactivate viral lytic replication. Although the mechanisms governing reactivation from the latent state remain unknown, the regulated expression of the viral immediate early genes represents a critical point in this process. These genes are controlled by transcription enhancer complexes whose assembly requires and is coordinated by the cellular C1 factor (host cell factor). In contrast to other tissues, the C1 factor is not detected in the nuclei of sensory neurons. Experimental conditions that induce the reactivation of herpes simplex virus in mouse model systems result in rapid nuclear localization of the protein, indicating that the C1 factor is sequestered in these cells until reactivation signals induce a redistribution of the protein. The regulated localization suggests that C1 is a critical switch determinant of the viral lytic-latent cycle.

  7. Isolation and cultivation of Walsby's square archaeon

    NARCIS (Netherlands)

    Bolhuis, H; Poele, EMT; Rodriguez-Valera, F

    2004-01-01

    In 1980, A. E. Walsby described a square halophilic archaeon. This archaeon is of specific interest because of its unique shape and its abundance in hypersaline ecosystems, which suggests an important ecophysiological role. Ever since its discovery, the isolation and cultivation of 'Walsby's square

  8. Some Theoretical Essences of Lithuania Squares Formation

    Directory of Open Access Journals (Sweden)

    Gintautas Tiškus

    2016-04-01

    Full Text Available In the Lithuanian acts of law and in the scientific literature there are no clear criteria and notions to define a square. The unbuilt city space places or the gaps between buildings are often defined as the squares, which do not have clear limits or destination. The mandatory attributes of the place which is called the square are indicated in the article, the notion of square is defined. The article deals with Lithuanian squares theme, analyses the differences between representation and representativeness. The article aims to indicate an influence of city environmental context and monument in the square on its function. The square is an independent element of city plan structure, but it is not an independent element of city spatial structure. The space and environment of the square are related to each other not only by physical, aesthetical relations, but as well as by causalities, which may be named as the essences of squares’ formation. The interdisciplinary discourse analysis method is applied in the article.

  9. SQUARE WAVE VOLTAMMETRIC DETERMINATION OF LEAD IN ...

    African Journals Online (AJOL)

    2011-12-31

    Dec 31, 2011 ... electrode working electrode (radiometer analytical SAS), a Pt wire counter electrode, and an Hg/Hg2Cl2 reference electrode (saturated with KCl). The parameters for square wave voltammetric measurements were: the potential step was 15 mV, the square wave amplitude was 50 mV, and the scan rate was ...

  10. Tikhonov Regularization and Total Least Squares

    DEFF Research Database (Denmark)

    Golub, G. H.; Hansen, Per Christian; O'Leary, D. P.

    2000-01-01

    formulation involves a least squares problem, can be recast in a total least squares formulation suited for problems in which both the coefficient matrix and the right-hand side are known only approximately. We analyze the regularizing properties of this method and demonstrate by a numerical example that...

  11. Redefining the magic square on numerical characters

    Science.gov (United States)

    Nasution, M. K. M.; Sawaluddin

    2018-02-01

    As a number system, the magic square is different from the others. Characteristic depends not only on size but also depends on numerical character in computation. This paper has redefined the term of magic square formally, by exposing the inductive general characteristics of cases to numerical ordering of numbers.

  12. Distribution of squares modulo a composite number

    OpenAIRE

    Aryan, Farzad

    2015-01-01

    In this paper we study the distribution of squares modulo a square-free number $q$. We also look at inverse questions for the large sieve in the distribution aspect and we make improvements on existing results on the distribution of $s$-tuples of reduced residues.

  13. Lagrange’s Four-Square Theorem

    Directory of Open Access Journals (Sweden)

    Watase Yasushige

    2015-02-01

    Full Text Available This article provides a formalized proof of the so-called “the four-square theorem”, namely any natural number can be expressed by a sum of four squares, which was proved by Lagrange in 1770. An informal proof of the theorem can be found in the number theory literature, e.g. in [14], [1] or [23].

  14. JPLEX: Java Simplex Implementation with Branch-and-Bound Search for Automated Test Assembly

    Science.gov (United States)

    Park, Ryoungsun; Kim, Jiseon; Dodd, Barbara G.; Chung, Hyewon

    2011-01-01

    JPLEX, short for Java simPLEX, is an automated test assembly (ATA) program. It is a mixed integer linear programming (MILP) solver written in Java. It reads in a configuration file, solves the minimization problem, and produces an output file for postprocessing. It implements the simplex algorithm to create a fully relaxed solution and…

  15. Genome Sequence of Bacillus simplex Strain P558, Isolated from a Human Fecal Sample.

    Science.gov (United States)

    Croce, Olivier; Hugon, Perrine; Lagier, Jean-Christophe; Bibi, Fehmida; Robert, Catherine; Azhar, Esam Ibraheem; Raoult, Didier; Fournier, Pierre-Edouard

    2014-12-11

    Bacillus simplex strain P558 was isolated from a fecal sample of a 25-year-old Saudi male. We sequenced the 5.98-Mb genome of the strain and compared it to that of B. simplex strain 1NLA3E. Copyright © 2014 Croce et al.

  16. Prevalence of intrathecal acyclovir resistant virus in herpes simplex encephalitis patients

    NARCIS (Netherlands)

    J.G. Mitterreiter (Johanna G.); M.J. Titulaer (Maarten); G.P. van Nierop (Gijs); J.J.A. van Kampen (Jeroen); G.I. Aron (Georgina); A.D.M.E. Osterhaus (Albert); G.M.G.M. Verjans (George); W.J.D. Ouwendijk (Werner )

    2016-01-01

    textabstractHerpes simplex encephalitis (HSE) is a life-threatening complication of herpes simplex virus (HSV) infection. Acyclovir (ACV) is the antiviral treatment of choice, but may lead to emergence of ACV-resistant (ACVR) HSV due to mutations in the viral UL23 gene encoding for the ACV-targeted

  17. Recidiverende erythema multiforme udløst af herpes simplex-virus

    DEFF Research Database (Denmark)

    Vestergård Grejsen, Dorthe; Henningsen, Emil

    2012-01-01

    We describe two cases of recurrent erythema multiforme, both associated to infection with herpes simplex virus. The importance of subclinical herpes is illustrated. Antiviral and additional treatment is described.......We describe two cases of recurrent erythema multiforme, both associated to infection with herpes simplex virus. The importance of subclinical herpes is illustrated. Antiviral and additional treatment is described....

  18. Herpes Simplex Virus Infection Mimicking Bullous Disease in an Immunocompromised Patient

    Directory of Open Access Journals (Sweden)

    Anne L.Y. Lecluse

    2010-06-01

    Full Text Available Immunodeficient patients are at risk of developing extended or atypical herpes simplex virus infections, which can be easily misdiagnosed. We present the case of a 79-year-old, treatment-induced (oral corticosteroid, immunocompromised female with an extensive atypical herpes simplex virus infection. This patient presented with multiple erosions and vesicles on the trunk with a subacute onset. The clinical differential diagnosis was herpes simplex infection, herpes zoster infection, pemphigus vulgaris or bullous pemphigoid. Due to the atypical clinical presentation and negative Tzanck test, suspicion of viral infection was low. High-dose steroid treatment was initiated. Subsequent histopathology, however, showed a herpes simplex virus infection. After discontinuing steroid treatment and initiating antiviral treatment, the patient recovered within a week. Emphasis must be placed on the importance of clinical awareness of extended and clinically atypical herpes simplex infections in immunocompromised patients. A negative Tzanck test does not rule out the possibility of a herpes infection.

  19. Significance of tear β2-MG radioimmunoassay in herpes simplex keratitis

    International Nuclear Information System (INIS)

    Feng Zhuxu; Zhao Suzhen; Zhang Qiliang; Chen Fengfen; Tang Baoyi

    1994-01-01

    Levels of tear and serum β 2 -MG are determined with radioimmunoassay in 35 patients with herpes simplex keratitis and 40 normal subjects. The results show that tear β 2 -MG levels of patients with herpes simplex keratitis (13.21 +- 6.15 mg/l) and normal subjects (8.43 +- 1.52 mg/l) are significantly different (P 2 -MG levels of tear and that of serum in normal subjects (P 2 -MG levels of tear and that of serum in patients with herpes simplex keratitis (P 2 -MG levels of patients with herpes simplex keratitis and that of normal subjects (P>0.05). The β 2 -MG levels of tear is higher than that of serum in normal subjects which reflects more correctly immune condition of patients with herpes simplex keratitis than that of serum

  20. Very Large-Scale Linear Programming: A Case Study in Combining Interior Point and Simplex Methods

    National Research Council Canada - National Science Library

    Bixby, Robert E; Gregory, John W; Lustig, Irvin J; Marsten, Roy E; Shanno, David F

    1991-01-01

    Experience with solving a 12,753,313 variable linear program is described. This problem is the linear programming relaxation of a set partitioning problem arising from an airline crew scheduling application...

  1. Tipping Point

    Medline Plus

    Full Text Available ... en español Blog About OnSafety CPSC Stands for Safety The Tipping Point Home > 60 Seconds of Safety (Videos) > The Tipping Point The Tipping Point by ... danger death electrical fall furniture head injury product safety television tipover tv Watch the video in Adobe ...

  2. Cathode uniformity of new square photomultiplier tubes

    International Nuclear Information System (INIS)

    Brenner, R.; Chou, H.P.; Strauss, M.G.; Winiecki, A.L.

    1981-01-01

    Square photomultiplier tubes (PMTs) should have better light collection than round PMTs when used in square or rectangular Anger-type #betta#-ray or neutron position detectors. Photocathode response uniformity of new RCA square PMTs type S83003E (51.5 x 51.5 mm 2 ) was measured and compared with conventional round PMTs. The PMTs were scanned with a small scintillation source while the anode signal amplitudes were processed in a computer-based multichannel analyzer. The analyzer was programmed in a mode which virtually eliminates effects due to statistical fluctuations in source rate and output amplitude. Pulse heights as a function of source position on the PMT face are shown for typical tubes. The response uniformity of 64 square PMTs and 21 round ones was evaluated. It is shown that the center region of the square PMTs is as uniform as that of the round ones and that the response in the corners is comparable to that in the center. Thus square PMTs appear to have an advantage for use in square or rectangular position detectors

  3. Simplex GPS and InSAR Inversion Software

    Science.gov (United States)

    Donnellan, Andrea; Parker, Jay W.; Lyzenga, Gregory A.; Pierce, Marlon E.

    2012-01-01

    Changes in the shape of the Earth's surface can be routinely measured with precisions better than centimeters. Processes below the surface often drive these changes and as a result, investigators require models with inversion methods to characterize the sources. Simplex inverts any combination of GPS (global positioning system), UAVSAR (uninhabited aerial vehicle synthetic aperture radar), and InSAR (interferometric synthetic aperture radar) data simultaneously for elastic response from fault and fluid motions. It can be used to solve for multiple faults and parameters, all of which can be specified or allowed to vary. The software can be used to study long-term tectonic motions and the faults responsible for those motions, or can be used to invert for co-seismic slip from earthquakes. Solutions involving estimation of fault motion and changes in fluid reservoirs such as magma or water are possible. Any arbitrary number of faults or parameters can be considered. Simplex specifically solves for any of location, geometry, fault slip, and expansion/contraction of a single or multiple faults. It inverts GPS and InSAR data for elastic dislocations in a half-space. Slip parameters include strike slip, dip slip, and tensile dislocations. It includes a map interface for both setting up the models and viewing the results. Results, including faults, and observed, computed, and residual displacements, are output in text format, a map interface, and can be exported to KML. The software interfaces with the QuakeTables database allowing a user to select existing fault parameters or data. Simplex can be accessed through the QuakeSim portal graphical user interface or run from a UNIX command line.

  4. Sequential analysis of CT findings in herpes simplex encephalitis

    International Nuclear Information System (INIS)

    Kawamura, Mitsuru; Tokumaru, Yukio; Ito, Naoki; Yamada, Tatsuo; Hirayama, Keizo

    1982-01-01

    CT findings of six patients with serologically confirmed herpes simplex encephalitis were analyzed sequentially. The initial change in CT scan in 3 cases was generalized cerebral edema instead of low density areas in the anterior temporal lobes, which have generally been known as the initial findings. Then, bilateral (5 cases) or unilateral (1 case) island-shaped low absorption areas in the insular cortex and the claustrum appeared within 10 days of onset in all 6 cases. These findings, especially the latter, seem to be characteristic of the acute stage and useful in the early diagnosis of herpes simplex encephalitis. The low density areas, then, spread to the temporal lobes, rectal and cingulate gyri in the subacute stage (3 cases) and finally to the frontal and occipital lobes in the chronic stage (2 cases). In the basal ganglia, thalamus, brain stem and cerebellum, however, there were no low density areas. In 2 cases there was no progression of low density areas beyond those of the acute stage. In one case there were high density areas in the temporal lobes and parapontine cisterns bilaterally. This could correspond to the pathological findings in herpes simplex encephalitis. The improvement of CT findings (or arrest at the early stage) was noted in 2 cases in which the clinical state also improved. This might well be the effect of adenine arabinoside. The one case treated with cytosine arabinoside had extensive low density areas in CT and finally died. The importance of CT in the evaluation of adenine arabinoside therapy was stressed. (author)

  5. Identification of autoclave-resistant Anisakis simplex allergens.

    Science.gov (United States)

    Carballeda-Sangiao, Noelia; Olivares, Fabiola; Rodriguez-Mahillo, Ana I; Careche, Mercedes; Tejada, Margarita; Moneo, Ignacio; González-Muñoz, Miguel

    2014-04-01

    Anisakis simplex is a fish parasite able to induce allergic reactions in humans infected when eating raw or undercooked fish parasitized with viable third-stage larvae. Some authors claim that exposure to nonviable Anisakis material can result in allergic symptoms in previously sensitized patients, indicating that parasite allergens are resistant to the thermal treatments of usual cooking procedures. Furthermore, some patients report symptoms after eating canned fish. The aim of this work was the analysis of parasite allergen stability in heating to 121 °C in an autoclave to simulate the thermal process applied to canned fish. Third-stage larvae were subjected to autoclaving for 20, 40, and 80 min, and parasite crude extracts were analyzed by electrophoresis, immunoblotting, and a flow-cytometric basophil activation test. Allergens resistant to autoclaving were separated by reversed-phase high-performance liquid chromatography and identified by ion trap mass spectrometry. Protein analysis by sodium dodecyl sulfate-polyacrylamide gel electrophoresis showed that autoclaving considerably reduced the number and intensity of identifiable protein bands in a time-dependent manner. Several allergens were detected by immunoblotting with a pool of A. simplex allergic patients' sera after autoclaving. Allergens of 9 and 14 kDa resistant to autoclaving were identified as Ani s 4 and Ani s 1 allergens, respectively. Functional analysis showed that allergens retain their capacity to activate basophils even after autoclaving for 80 min. In conclusion, some relevant A. simplex allergens retain their capacity to bind immunoglobulin E and activate basophils after being subjected to autoclaving, which is a method equivalent to that used in industrial canning processes.

  6. RNA interference inhibits herpes simplex virus type 1 isolated from saliva samples and mucocutaneous lesions.

    Science.gov (United States)

    Silva, Amanda Perse da; Lopes, Juliana Freitas; Paula, Vanessa Salete de

    2014-01-01

    The aim of this study was to evaluate the use of RNA interference to inhibit herpes simplex virus type-1 replication in vitro. For herpes simplex virus type-1 gene silencing, three different small interfering RNAs (siRNAs) targeting the herpes simplex virus type-1 UL39 gene (sequence si-UL 39-1, si-UL 39-2, and si-UL 39-3) were used, which encode the large subunit of ribonucleotide reductase, an essential enzyme for DNA synthesis. Herpes simplex virus type-1 was isolated from saliva samples and mucocutaneous lesions from infected patients. All mucocutaneous lesions' samples were positive for herpes simplex virus type-1 by real-time PCR and by virus isolation; all herpes simplex virus type-1 from saliva samples were positive by real-time PCR and 50% were positive by virus isolation. The levels of herpes simplex virus type-1 DNA remaining after siRNA treatment were assessed by real-time PCR, whose results demonstrated that the effect of siRNAs on gene expression depends on siRNA concentration. The three siRNA sequences used were able to inhibit viral replication, assessed by real-time PCR and plaque assays and among them, the sequence si-UL 39-1 was the most effective. This sequence inhibited 99% of herpes simplex virus type-1 replication. The results demonstrate that silencing herpes simplex virus type-1 UL39 expression by siRNAs effectively inhibits herpes simplex virus type-1 replication, suggesting that siRNA based antiviral strategy may be a potential therapeutic alternative. Copyright © 2014. Published by Elsevier Editora Ltda.

  7. Partial update least-square adaptive filtering

    CERN Document Server

    Xie, Bei

    2014-01-01

    Adaptive filters play an important role in the fields related to digital signal processing and communication, such as system identification, noise cancellation, channel equalization, and beamforming. In practical applications, the computational complexity of an adaptive filter is an important consideration. The Least Mean Square (LMS) algorithm is widely used because of its low computational complexity (O(N)) and simplicity in implementation. The least squares algorithms, such as Recursive Least Squares (RLS), Conjugate Gradient (CG), and Euclidean Direction Search (EDS), can converge faster a

  8. Around and Beyond the Square of Opposition

    CERN Document Server

    Béziau, Jean-Yves

    2012-01-01

    aiThe theory of oppositions based on Aristotelian foundations of logic has been pictured in a striking square diagram which can be understood and applied in many different ways having repercussions in various fields: epistemology, linguistics, mathematics, psychology. The square can also be generalized in other two-dimensional or multi-dimensional objects extending in breadth and depth the original theory of oppositions of Aristotle. The square of opposition is a very attractive theme which has been going through centuries without evaporating. Since 10 years there is a new growing interest for

  9. Regularization by truncated total least squares

    DEFF Research Database (Denmark)

    Hansen, Per Christian; Fierro, R.D; Golub, G.H

    1997-01-01

    The total least squares (TLS) method is a successful method for noise reduction in linear least squares problems in a number of applications. The TLS method is suited to problems in which both the coefficient matrix and the right-hand side are not precisely known. This paper focuses on the use...... matrix. We express our results in terms of the singular value decomposition (SVD) of the coefficient matrix rather than the augmented matrix. This leads to insight into the filtering properties of the truncated TLS method as compared to regularized least squares solutions. In addition, we propose...

  10. Good Filtrations and the Steinberg Square

    DEFF Research Database (Denmark)

    Kildetoft, Tobias

    , are presented. The main results of the dissertation provide formulas which describe how to find the multiplicities of simple modules in the socle of a Steinberg square, given information about the multiplicities of simple modules in Weyl modules. Further, it is shown that when the prime is large enough......, the socle completely determines how a Steinberg square decomposes. The dissertation also investigates the socle of the Steinberg square for a finite group of Lie type, again providing formulas which describe how to find the multiplicity of a simple module in the socle, given information about...... the multiplicities of simple modules in Weyl modules....

  11. Radiation enhaced reactivation of herpes simplex virus: effect of caffeine

    International Nuclear Information System (INIS)

    Hellman, K.B.; Lytle, C.D.; Bockstahler, L.E.

    1976-01-01

    Ultraviolet enhanced (Weigle) reactivation of UV-irradiated herpes simplex virus in UV-irradiated CV-1 monkey kidney cell monolayers was decreased by caffeine. X-ray enhanced reactivation of UV-irradiated virus in X-irradiated monolayers (X-ray reactivation) and UV- or X-ray-inactivated capacity of the cells to support unirradiated virus plaque formation were unaffected by caffeine. The results suggest that a caffeine-sensitive process is necessary for the expression of Weigle reactivation for herpes virus. Since caffeine did not significantly affect X-ray reactivation, different mechanisms may be responsible for the expression of Weigle reactivation and X-ray reactivation

  12. Radiation enhanced reactivation of herpes simplex virus: effect of caffeine.

    Science.gov (United States)

    Hellman, K B; Lytle, C D; Bockstahler, L E

    1976-09-01

    Ultaviolet enhanced (Weigle) reactivation of UV-irradiated herpes simplex virus in UV-irradiated CV-1 monkey kidney cell monolayers was decreased by caffeine. X-ray enhanced reactivation of UV-irradiated virus in X-irradiated monolayers (X-ray reactivation) and UV- or X-ray-inactivated capacity of the cells to support unirradiated virus plaque formation were unaffected by caffeine. The results suggest that a caffeine-sensitive process is necessary for the expression of Weigle reactivation for herpes virus. Since cafeine did not significantly affect X-ray reactivation, different mechanisms may be responsible for the expression of Weigle reactivation and X-ray reactivation.

  13. An Unusual Presentation of Herpes Simplex Virus Encephalitis

    Directory of Open Access Journals (Sweden)

    Ray Boyapati

    2012-01-01

    Full Text Available We present a case of a 65-year-old man with an acute alteration in mental state that was initially diagnosed as a functional psychiatric condition. After extensive workup, herpes simplex virus type 1 (HSV-1 was detected in the patient’s cerebrospinal fluid (CSF by polymerase chain reaction (PCR, and he responded rapidly to treatment with acyclovir. The case illustrates the importance of actively excluding organic causes in such patients, the need to have a low threshold of suspicion for HSV encephalitis, and the central role of CSF PCR testing for the diagnosis of HSV encephalitis, even in the absence of CSF biochemical abnormalities.

  14. The inverse square law of gravitation

    International Nuclear Information System (INIS)

    Cook, A.H.

    1987-01-01

    The inverse square law of gravitation is very well established over the distances of celestial mechanics, while in electrostatics the law has been shown to be followed to very high precision. However, it is only within the last century that any laboratory experiments have been made to test the inverse square law for gravitation, and all but one has been carried out in the last ten years. At the same time, there has been considerable interest in the possibility of deviations from the inverse square law, either because of a possible bearing on unified theories of forces, including gravitation or, most recently, because of a possible additional fifth force of nature. In this article the various lines of evidence for the inverse square law are summarized, with emphasis upon the recent laboratory experiments. (author)

  15. Evaluation by ELISA of Anisakis simplex Larval Antigen Purified by Affinity Chromatography

    Directory of Open Access Journals (Sweden)

    Rodero M

    2002-01-01

    Full Text Available In order to improve the specificity and sensitivity of the techniques for the human anisakidosis diagnosis, a method of affinity chromatography for the purification of species-specific antigens from Anisakis simplex third-stage larvae (L3 has been developed. New Zealand rabbits were immunized with A. simplex or Ascaris suum antigens or inoculated with Toxocara canis embryonated eggs. The IgG specific antibodies were isolated by means of protein A-Sepharose CL-4B beads columns. IgG anti-A. simplex and -A. suum were coupled to CNBr-activated Sepharose 4B. For the purification of the larval A. simplex antigens, these were loaded into the anti-A. simplex column and bound antigens eluted. For the elimination of the epitopes responsible for the cross-reactions, the A. simplex specific proteins were loaded into the anti-A. suum column. To prove the specificity of the isolated proteins, immunochemical analyses by polyacrylamide gel electrophoresis were carried out. Further, we studied the different responses by ELISA to the different antigenic preparations of A. simplex used, observing their capability of discriminating among the different antisera raised in rabbits (anti-A. simplex, anti-A. suum, anti-T. canis. The discriminatory capability with the anti-T. canis antisera was good using the larval A. simplex crude extract (CE antigen. When larval A. simplex CE antigen was loaded into a CNBr-activated Sepharose 4B coupled to IgG from rabbits immunized with A. simplex CE antigen, its capability for discriminate between A. simplex and A. suum was improved, increasing in the case of T. canis. The best results were obtained using larval A. simplex CE antigen loaded into a CNBr-activated Sepharose 4B coupled to IgG from rabbits immunized with adult A. suum CE antigen. When we compared the different serum dilution and antigenic concentration, we selected the working serum dilution of 1/400 and 1 mg/ml of antigenic concentration.

  16. Inactivation of Anisakis simplex L3 in the flesh of white spotted conger (Conger myriaster) by high hydrostatic pressure and its effect on quality.

    Science.gov (United States)

    Lee, Ki-Hoon; Park, Shin Young; Ha, Sang-Do

    2016-06-01

    Koreans consume much seafood; the country is surrounded on the east, west and south by the sea. Koreans have eaten raw sashimi for a long time. However, a concern in the raw sea food industry is that the parasitic nematode Anisakis simplex L3 occurs naturally in marine fish. Thus, the fishery industry needs a non-thermal processing method. High hydrostatic pressure (HPP) has been demonstrated to be effective. White spotted conger flesh containing 20 live larvae was exposed to different pressures (150 and 200 MPa for 1 and 5 min; 250 and 300 MPa each for 1 min). The viability of A. simplex L3 was significantly (p  0.05) in any of the Hunter colour ('L', 'a' and 'b') values were found after HPP at 200 MPa for 5 min. The fresh treated at 300 MPa for 1 min scored 4.0 (the defect limit of quality) of flavour, texture and overall acceptability in untrained sensory evaluation using a seven-point hedonic scale. However, the flesh treated at 200 MPa for 5 min scored > 5.0 ('like') for all sensory parameters. This study suggested that HPP at 200 MPa for 5 min could potentially be used for the inactivation of A. simplex L3 in raw fishery food products without any concomitant changes in their colour or sensory qualities.

  17. Least squares orthogonal polynomial approximation in several independent variables

    International Nuclear Information System (INIS)

    Caprari, R.S.

    1992-06-01

    This paper begins with an exposition of a systematic technique for generating orthonormal polynomials in two independent variables by application of the Gram-Schmidt orthogonalization procedure of linear algebra. It is then demonstrated how a linear least squares approximation for experimental data or an arbitrary function can be generated from these polynomials. The least squares coefficients are computed without recourse to matrix arithmetic, which ensures both numerical stability and simplicity of implementation as a self contained numerical algorithm. The Gram-Schmidt procedure is then utilised to generate a complete set of orthogonal polynomials of fourth degree. A theory for the transformation of the polynomial representation from an arbitrary basis into the familiar sum of products form is presented, together with a specific implementation for fourth degree polynomials. Finally, the computational integrity of this algorithm is verified by reconstructing arbitrary fourth degree polynomials from their values at randomly chosen points in their domain. 13 refs., 1 tab

  18. Arts@CERN | ACCELERATE Austria | 19 May | IdeaSquare

    CERN Multimedia

    2016-01-01

    ​Arts@CERN welcomes you to a talk by architects Sandra Manninger and Matias Del Campo, at IdeaSquare (Point 1) on May 19 at 6:00 p.m.   Sensible Bodies - architecture, data, and desire. Sandra and Matias are the winning architects for ACCELERATE Austria. Focusing on the notion of geometry, they are at CERN during the month of May, as artists in residence. Their research highlights how to go beyond beautiful data to discover something that could be defined voluptuous data. This coagulation of numbers, algorithms, procedures and programs uses the forces of thriving nature and, passing through the calculation of a multi-core processor, knits them with human desire. Read more. ACCELERATE Austria is supported by The Department of Arts of the Federal Chancellery of Austria. Thursday, May 19 at 6:00 p.m. at IdeaSquare.  See event on Indico. 

  19. Unusual Initial Presentation of Herpes Simplex Virus as Inguinal Lymphadenopathy

    Directory of Open Access Journals (Sweden)

    Sarah A. Fleming

    2015-01-01

    Full Text Available Genital herpes simplex virus (HSV infections are a common cause of inguinal lymphadenopathy. However, surgical excision of enlarged inguinal nodes is almost never performed to initially diagnose genital herpes simplex virus, due to the distinct external presentation of genital herpetic vesicles that usually occur with the first symptoms of infection. Therefore, the histologic and immunophenotypic features of HSV-associated inguinal lymphadenopathy are unfamiliar to most pathologists. The current report describes the lymph node pathology of two immunocompetent patients, whose initial HSV diagnosis was established through surgical excision of enlarged inguinal lymph nodes. Histologic examination showed features consistent with viral lymphadenopathy, including florid follicular hyperplasia, monocytoid B-cell hyperplasia, and paracortical hyperplasia without extensive necrosis. Immunohistochemical stains for HSV antigens, using polyclonal anti-HSV I and II antibodies, demonstrate strong immunoreactivity for HSV in a small number of cells in the subcapsular sinuses, especially in areas with monocytoid B-cell hyperplasia. Rare scattered HSV-positive cells also are identified in paracortical areas and germinal centers. We conclude that an initial diagnosis of genital HSV infection may be established by inguinal lymph node biopsy.

  20. Empiric acyclovir for neonatal herpes simplex virus infection.

    Science.gov (United States)

    Vanderpluym, Christina; Tawfik, Gerda; Hervas-Malo, Marilou; Lacaze-Masmonteil, Thierry; Kellner, James; Robinson, Joan L

    2012-08-01

    Because neonatal herpes simplex virus (NHSV) infection is difficult to diagnose, there has been a move towards using more empiric acyclovir (ACV). The purpose of this study was to review the use of ACV to optimize future management of NHSV. Charts were reviewed for infants started on intravenous ACV up to day 43 of life--January 2001 through February 2007--at five hospitals in Edmonton and Calgary. ACV was started for possible (N = 115) or proven (N = 3) herpes simplex virus (HSV) infection. Six of the infants with possible HSV infection later had proven HSV infection. Seizures (34%), hemodynamic instability (29%) and skin lesions (24%) were the most common indications for ACV. Among the 118 infants, 106 (90%) had cerebrospinal fluid obtained and 82 (69%) had at least one surface swab for HSV but 4 (3%) had no specimens submitted for HSV detection. ACV was continued for 3.9 ± 3.5 days in the infants with no proven HSV disease. Possible nephrotoxicity from ACV was recorded in 3 of these 109 infants and in none of the infants with proven HSV disease. Clinicians in Alberta primarily consider the diagnosis of NHSV infection when confronted with a neonate with seizures, hemodynamic instability or suspicious skin lesions, but need to consider the diagnosis more often if all cases are to be treated at first presentation. They often perform incomplete investigations to rule out NHSV infection. Adverse events from ACV appear to be uncommon when the drug is used for suspected NHSV disease.

  1. Herpes simplex virus 1 pneumonia: conventional chest radiograph pattern

    International Nuclear Information System (INIS)

    Umans, U.; Golding, R.P.; Duraku, S.; Manoliu, R.A.

    2001-01-01

    The aim of this study was to describe the findings on plain chest radiographs in patients with herpes simplex virus pneumonia (HSVP). The study was based on 17 patients who at a retrospective search have been found to have a monoinfection with herpes simplex virus. The diagnosis was established by isolation of the virus from material obtained during fiberoptic bronchoscopy (FOB) which also included broncho-alveolar lavage and tissue sampling. Fourteen patients had a chest radiograph performed within 24 h of the date of the FOB. Two radiographs showed no abnormalities of the lung parenchyma. The radiographs of the other 12 patients showed lung opacification, predominantly lobar or more extensive and always bilateral. Most patients presented with a mixed airspace and interstitial pattern of opacities, but 11 of 14 showed at least an airspace consolidation. Lobar, segmental, or subsegmental atelectasis was present in 7 patients, and unilateral or bilateral pleural effusion in 8 patients, but only in 1 patient was it a large amount. In contradiction to the literature which reports a high correlation between HSVP and acute respiratory distress syndrome (ARDS), 11 of 14 patients did not meet the pathophysiological criteria for ARDS. The radiologist may suggest the diagnosis of HSVP when bilateral airspace consolidation or mixed opacities appear in a susceptible group of patients who are not thought to have ARDS or pulmonary edema. The definite diagnosis of HSV pneumonia can be established only on the basis of culture of material obtained by broncho-alveolar lavage. (orig.)

  2. Bioactive natural products with anti-herpes simplex virus properties.

    Science.gov (United States)

    Hassan, Sherif T S; Masarčíková, Radka; Berchová, Kateřina

    2015-10-01

    In this review, we highlight and summarise the most promising extracts, fractions and pure compounds as potential anti-herpes simplex virus (HSV) agents derived from microorganisms, marine organisms, fungi, animals and plants. The role of natural products in the development of anti-HSV drugs will be discussed. Herpes simplex viruses (HSV-1 and -2) are common human pathogens that remain a serious threat to human health. In recent years, a great interest has been devoted to the search for integrated management of HSV infections. Acyclovir and related nucleoside analogues have been licensed for the therapy that target viral DNA polymerase. Although these drugs are currently effective against HSV infections, the intensive use of these drugs has led to the problem of drug-resistant strains. Therefore, the search for new sources to develop new antiherpetic agents has gained major priority to overcome the problem. Natural products as potential, new anti-HSV drugs provide several advantages such as reduced side effects, less resistance, low toxicity and various mechanisms of action. This paper aims to provide an overview of natural products that possess antiviral activity against HSV. © 2015 Royal Pharmaceutical Society.

  3. The molecular basis of herpes simplex virus latency

    Science.gov (United States)

    Nicoll, Michael P; Proença, João T; Efstathiou, Stacey

    2012-01-01

    Herpes simplex virus type 1 is a neurotropic herpesvirus that establishes latency within sensory neurones. Following primary infection, the virus replicates productively within mucosal epithelial cells and enters sensory neurones via nerve termini. The virus is then transported to neuronal cell bodies where latency can be established. Periodically, the virus can reactivate to resume its normal lytic cycle gene expression programme and result in the generation of new virus progeny that are transported axonally back to the periphery. The ability to establish lifelong latency within the host and to periodically reactivate to facilitate dissemination is central to the survival strategy of this virus. Although incompletely understood, this review will focus on the mechanisms involved in the regulation of latency that centre on the functions of the virus-encoded latency-associated transcripts (LATs), epigenetic regulation of the latent virus genome and the molecular events that precipitate reactivation. This review considers current knowledge and hypotheses relating to the mechanisms involved in the establishment, maintenance and reactivation herpes simplex virus latency. PMID:22150699

  4. Bernstein's inequality for multivariate polynomials on the standard simplex

    Directory of Open Access Journals (Sweden)

    Révész Szilárd Gy

    2005-01-01

    Full Text Available The classical Bernstein pointwise estimate of the (first derivative of a univariate algebraic polynomial on an interval has natural extensions to the multivariate setting. However, in several variables the domain of boundedness, even if convex, has a considerable geometric variety. In 1990, Y. Sarantopoulos satisfactorily settled the case of a centrally symmetric convex body by a method we may call "the method of inscribed ellipses." On the other hand, for the general case of nonsymmetric convex bodies we are only within a constant factor of an exact inequality. The best known results suggest relevance of the generalized Minkowski functional, and a natural conjecture for the exact Bernstein factor was formulated with this geometric quantity. This work deals with the most natural and simple nonsymmetric case, that of a standard simplex in , and computes the exact yield of the method of inscribed ellipses. Although the known general estimates of the Bernstein factor are improved for the simplex here, we find that not even the exact yield of the inscribed ellipse method reaches the conjecture. However, we also show that for an arbitrary convex body the subset of ridge polynomials satisfies the conjecture.

  5. Tipping Point

    Medline Plus

    Full Text Available ... OnSafety CPSC Stands for Safety The Tipping Point Home > 60 Seconds of Safety (Videos) > The Tipping Point ... 24 hours a day. For young children whose home is a playground, it’s the best way to ...

  6. Fixed Points

    Indian Academy of Sciences (India)

    Home; Journals; Resonance – Journal of Science Education; Volume 5; Issue 5. Fixed Points - From Russia with Love - A Primer of Fixed Point Theory. A K Vijaykumar. Book Review Volume 5 Issue 5 May 2000 pp 101-102. Fulltext. Click here to view fulltext PDF. Permanent link:

  7. Diffusion-weighted MR imaging findings in a patient with herpes simplex encephalitis

    International Nuclear Information System (INIS)

    Heiner, L.; Demaerel, Ph.

    2003-01-01

    Introduction: Herpes simplex meningoencephalitis is one of the most common viral central nervous system infection in adults. Early diagnosis is essential for treatment. Case report: We present a case of a 68-year-old female patient with herpes simplex infection. On admission, she was in severe clinical condition. Diffusion-weighted (DW) magnetic resonance imaging detected brain involvement better than conventional sequences. After acyclovir therapy, the patient fully recovered. Conclusion: DW magnetic resonance imaging is expected to provide a more sensitive imaging in herpes simplex patients than conventional sequences

  8. Clinical and biological differences between recurrent herpes simplex virus and varicella-zoster virus infections

    International Nuclear Information System (INIS)

    Straus, S.E.

    1989-01-01

    The major features that distinguish recurrent herpes simplex virus infections from zoster are illustrated in this article by two case histories. The clinical and epidemiologic features that characterize recurrent herpes simplex virus and varicella-zoster virus infections are reviewed. It is noted that herpesvirus infections are more common and severe in patients with cellular immune deficiency. Each virus evokes both humoral and cellular immune response in the course of primary infection. DNA hybridization studies with RNA probes labelled with sulfur-35 indicate that herpes simplex viruses persist within neurons, and that varicella-zoster virus is found in the satellite cells that encircle the neurons

  9. Non-spill control squared cascade

    International Nuclear Information System (INIS)

    Kai, Tsunetoshi; Inoue, Yoshiya; Oya, Akio; Suemori, Nobuo.

    1974-01-01

    Object: To reduce a mixed loss thus enhancing separating efficiency by the provision of a simple arrangement wherein a reflux portion in a conventional spill control squared cascade is replaced by a special stage including centrifugal separators. Structure: Steps in the form of a square cascade, in which a plurality of centrifugal separators are connected by pipe lines, are accumulated in multistage fashion to form a squared cascade. Between the adjoining steps is disposed a special stage including a centrifugal separator which receives both lean flow from the upper step and rich flow from the lower step. The centrifugal separator in the special stage has its rich side connected to the upper step and its lean side connected to the lower step. Special stages are each disposed at the upper side of the uppermost step and at the lower side of the lowermost step. (Kamimura, M.)

  10. Least Squares Data Fitting with Applications

    DEFF Research Database (Denmark)

    Hansen, Per Christian; Pereyra, Víctor; Scherer, Godela

    As one of the classical statistical regression techniques, and often the first to be taught to new students, least squares fitting can be a very effective tool in data analysis. Given measured data, we establish a relationship between independent and dependent variables so that we can use the data...... predictively. The main concern of Least Squares Data Fitting with Applications is how to do this on a computer with efficient and robust computational methods for linear and nonlinear relationships. The presentation also establishes a link between the statistical setting and the computational issues...... that help readers to understand and evaluate the computed solutions • many examples that illustrate the techniques and algorithms Least Squares Data Fitting with Applications can be used as a textbook for advanced undergraduate or graduate courses and professionals in the sciences and in engineering....

  11. Tipping Point

    Medline Plus

    Full Text Available ... Point by CPSC Blogger September 22, 2009 appliance child Childproofing CPSC danger death electrical fall furniture head ... see news reports about horrible accidents involving young children and furniture, appliance and tv tip-overs. The ...

  12. One-dimensional scattering problem for inverse square potential

    International Nuclear Information System (INIS)

    Mineev, V.S.

    1990-01-01

    Analytical continuation of the solution for the Schroedinger equation of inverse square potential, together with the modified method for variation of constants makes it possible to construct admittable self-adjoint extensions and to completely analyze the respective scattering problem along the entire line. In this case, the current density conservation and the wave function continuity when passing through the singular point x=0 require, that a 8-shaped induced potential should be introduced in the Schroedinger equation. The relevant calculations have shown that the potential x -2 can be either absolutely penetrable or absolutely impenetrable. 16 refs

  13. Decision-Directed Recursive Least Squares MIMO Channels Tracking

    Directory of Open Access Journals (Sweden)

    2006-01-01

    Full Text Available A new approach for joint data estimation and channel tracking for multiple-input multiple-output (MIMO channels is proposed based on the decision-directed recursive least squares (DD-RLS algorithm. RLS algorithm is commonly used for equalization and its application in channel estimation is a novel idea. In this paper, after defining the weighted least squares cost function it is minimized and eventually the RLS MIMO channel estimation algorithm is derived. The proposed algorithm combined with the decision-directed algorithm (DDA is then extended for the blind mode operation. From the computational complexity point of view being O3 versus the number of transmitter and receiver antennas, the proposed algorithm is very efficient. Through various simulations, the mean square error (MSE of the tracking of the proposed algorithm for different joint detection algorithms is compared with Kalman filtering approach which is one of the most well-known channel tracking algorithms. It is shown that the performance of the proposed algorithm is very close to Kalman estimator and that in the blind mode operation it presents a better performance with much lower complexity irrespective of the need to know the channel model.

  14. LEAST SQUARES FITTING OF ELLIPSOID USING ORTHOGONAL DISTANCES

    Directory of Open Access Journals (Sweden)

    SEBAHATTIN BEKTAS

    Full Text Available In this paper, we present techniques for ellipsoid fitting which are based on minimizing the sum of the squares of the geometric distances between the data and the ellipsoid. The literature often uses "orthogonal fitting" in place of "geometric fitting" or "best-fit". For many different purposes, the best-fit ellipsoid fitting to a set of points is required. The problem offitting ellipsoid is encounteredfrequently intheimage processing, face recognition, computer games, geodesy etc. Today, increasing GPS and satellite measurementsprecisionwill allow usto determine amore realistic Earth ellipsoid. Several studies have shown that the Earth, other planets, natural satellites, asteroids and comets can be modeled as triaxial ellipsoids Burša and Šima (1980, Iz et all (2011. Determining the reference ellipsoid for the Earth is an important ellipsoid fitting application, because all geodetic calculations are performed on the reference ellipsoid. Algebraic fitting methods solve the linear least squares (LS problem, and are relatively straightforward and fast. Fitting orthogonal ellipsoid is a difficult issue. Usually, it is impossible to reach a solution with classic LS algorithms. Because they are often faced with the problem of convergence. Therefore, it is necessary to use special algorithms e.g. nonlinear least square algorithms. We propose to use geometric fitting as opposed to algebraic fitting. This is computationally more intensive, but it provides scope for placing visually apparent constraints on ellipsoid parameter estimation and is free from curvature bias Ray and Srivastava (2008.

  15. The Laboratory Diagnosis of Herpes Simplex Virus Infections

    Directory of Open Access Journals (Sweden)

    Ameeta Singh

    2005-01-01

    Full Text Available Herpes simplex virus (HSV types 1 and 2 cause genital herpes infections and are the most common cause of genital ulcer disease in industrialized nations. Although these infections are very common, the majority of them remain underdiagnosed because they are asymptomatic or unrecognized. A clinical diagnosis of genital herpes should always be confirmed by laboratory testing; this can be accomplished through the use of direct tests for viral isolation, the detection of antigen or, more recently, the detection of HSV DNA using molecular diagnostic techniques. Testing for serotypes is recommended because of the different prognostic and counselling implications. Type-specific HSV serology is becoming more readily available and will enhance the ability to make the diagnosis and guide clinical management in select patients.

  16. Herpes simplex virus 1 induces de novo phospholipid synthesis

    Energy Technology Data Exchange (ETDEWEB)

    Sutter, Esther [Electron Microscopy, Institute of Veterinary Anatomy, University of Zuerich (Switzerland); Oliveira, Anna Paula de; Tobler, Kurt [Electron microscopy, Institute of Virology, University of Zuerich (Switzerland); Schraner, Elisabeth M. [Electron Microscopy, Institute of Veterinary Anatomy, University of Zuerich (Switzerland); Sonda, Sabrina [Institute of Parasitology, University of Zuerich (Switzerland); Kaech, Andres [Center for Microscopy and Image Analysis, University of Zuerich (Switzerland); Lucas, Miriam S. [Electron Microscopy ETH Zuerich (EMEZ), Swiss Federal Institute of Technology, Zuerich (Switzerland); Ackermann, Mathias [Electron microscopy, Institute of Virology, University of Zuerich (Switzerland); Wild, Peter, E-mail: pewild@access.uzh.ch [Electron Microscopy, Institute of Veterinary Anatomy, University of Zuerich (Switzerland)

    2012-08-01

    Herpes simplex virus type 1 capsids bud at nuclear membranes and Golgi membranes acquiring an envelope composed of phospholipids. Hence, we measured incorporation of phospholipid precursors into these membranes, and quantified changes in size of cellular compartments by morphometric analysis. Incorporation of [{sup 3}H]-choline into both nuclear and cytoplasmic membranes was significantly enhanced upon infection. [{sup 3}H]-choline was also part of isolated virions even grown in the presence of brefeldin A. Nuclei expanded early in infection. The Golgi complex and vacuoles increased substantially whereas the endoplasmic reticulum enlarged only temporarily. The data suggest that HSV-1 stimulates phospholipid synthesis, and that de novo synthesized phospholipids are inserted into nuclear and cytoplasmic membranes to i) maintain membrane integrity in the course of nuclear and cellular expansion, ii) to supply membrane constituents for envelopment of capsids by budding at nuclear membranes and Golgi membranes, and iii) to provide membranes for formation of transport vacuoles.

  17. [Role of Herpes simplex virus in the immune stromal keratitis].

    Science.gov (United States)

    Vinagre, C; Martínez, M J; Vogel, M; Traipe, L; Stoppel, J; Squella, O; Srur, M; Charlín, R

    2001-03-01

    Herpes simplex virus (HSV) infection of the cornea is a leading cause of blindness in occidental countries and a common recurrent manifestation of it is the immune stromal keratitis (ISK). However, it is not known whether active viral replication occurs during the acute phase of the disease, because isolation of the virus by conventional culture techniques has not been accomplished. To establish the presence of HSV in patients with ISK. Fourteen corneal swabbing samples, from active diseased eyes of patients with clinical diagnosis of ISK, were submitted to Herpchek and PCR for the identification of HSV antigens and genome. All ISK samples were negative by both techniques. It was not possible to identify HSV antigens nor their genome by the methodology used. It is likely that, they can't be detected in corneal superficial layers or probably there is no viral replication at this stage of the disease, so antiviral therapy should be reconsidered.

  18. Neonatal herpes simplex virus infection: epidemiology and treatment.

    Science.gov (United States)

    James, Scott H; Kimberlin, David W

    2015-03-01

    Herpes simplex virus types 1 (HSV-1) and 2 (HSV-2) are highly prevalent viruses capable of establishing lifelong infection. Genital herpes in women of childbearing age represents a major risk for mother-to-child transmission (MTCT) of HSV infection, with primary and first-episode genital HSV infections posing the highest risk. The advent of antiviral therapy with parenteral acyclovir has led to significant improvement in neonatal HSV disease mortality. Further studies are needed to improve the clinician's ability to identify infants at increased risk for HSV infection and prevent MTCT, and to develop novel antiviral agents with increased efficacy in infants with HSV infection. Copyright © 2015 Elsevier Inc. All rights reserved.

  19. Lytic Promoters Express Protein during Herpes Simplex Virus Latency

    Science.gov (United States)

    Russell, Tiffany A.; Tscharke, David C.

    2016-01-01

    Herpes simplex virus (HSV) has provided the prototype for viral latency with previously well-defined acute or lytic and latent phases. More recently, the deep quiescence of HSV latency has been questioned with evidence that lytic genes can be transcribed in this state. However, to date the only evidence that these transcripts might be translated has come from immunological studies that show activated T cells persist in the nervous system during latency. Here we use a highly sensitive Cre-marking model to show that lytic and latent phases are less clearly defined in two significant ways. First, around half of the HSV spread leading to latently infected sites occurred beyond the initial acute infection and second, we show direct evidence that lytic promoters can drive protein expression during latency. PMID:27348812

  20. Fatal Neonatal Herpes Simplex Infection Likely from Unrecognized Breast Lesions.

    Science.gov (United States)

    Field, Scott S

    2016-02-01

    Type 1 herpes simplex virus (HSV-1) is very prevalent yet in rare circumstances can lead to fatal neonatal disease. Genital acquisition of type 2 HSV is the usual mode for neonatal herpes, but HSV-1 transmission by genital or extragenital means may result in greater mortality rates. A very rare scenario is presented in which the mode of transmission was likely through breast lesions. The lesions were seen by nurses as well as the lactation consultant and obstetrician in the hospital after delivery of the affected baby but not recognized as possibly being caused by herpes. The baby died 9 days after birth with hepatic failure and disseminated intravascular coagulation. Peripartum health care workers need to be aware of potential nongenital (including from the breast[s]) neonatal herpes acquisition, which can be lethal. © The Author(s) 2015.

  1. Three new cycloartenol glycosides from the roots of Cimicifuga simplex.

    Science.gov (United States)

    Kuang, HaiXue; Su, Yang; Wang, QiuHong; Wu, Lun; Yang, BingYou; Wang, ZhiBin; Xia, YongGang

    2012-04-01

    Three new cycloartenol triterpene saponins, 3 β,16 α-dihydroxy-12-acetoxy-16,22-cyclo-23-ketone-24 R,25-epoxy-cycloartane-7-ene 3- O- β-D-galactopyranoside ( 1), 24- O-hydroxy-7,8-didehydrohydroshengmanol 3- O- β-D-galactopyranoside ( 2), and 24-epi-24- O-hydroxy-7,8-didehydrohydroshengmanol 3- O- β-D-galactopyranoside ( 3), were isolated from the ethyl acetate soluble fraction of Cimicifuga simplex. Their structures were established by detailed spectroscopic analysis, including extensive 2D-NMR data. This is the first time that a 16,22-cyclo type glycosidesaponin from aCimicifuga species was reported. The immunosuppressive activities of the new compounds were evaluated by a ConA-stimulated T splenocyte proliferation assay in vitro. © Georg Thieme Verlag KG Stuttgart · New York.

  2. Update on Neonatal Herpes Simplex Epidemiology in the Netherlands: A Health Problem of Increasing Concern?

    NARCIS (Netherlands)

    van Oeffelen, Louise; Biekram, Manisha; Poeran, Jashvant; Hukkelhoven, Chantal; Galjaard, Sander; van der Meijden, Wim; Op de Coul, Eline

    2018-01-01

    This paper provides an update on the incidence of neonatal herpes, guideline adherence by health care professionals (HCP), and trends in genital herpes simplex virus (HSV) infection during pregnancy in the Netherlands.

  3. Evolutionary and ecological differentiation in the pantropical to warm-temperate seaweed Digenea simplex (Rhodophyta)

    NARCIS (Netherlands)

    Pakker, H; Klerk, H; vanCampen, JH; Olsen, JL; Breeman, AM

    Genetic differentiation among geographic isolates of the pantropical to warm-temperate red alga Digenea simplex (Wulfen) C. Agardh was investigated using random amplified polymorphic DNA (RAPD) markers, crossing studies, and temperature tolerances experiments. Eleven isolates representing

  4. A Fusogenic Oncolytic Herpes Simplex Virus for Therapy of Advanced Ovarian Cancer

    National Research Council Canada - National Science Library

    Zhang, Xiaoliu

    2004-01-01

    The tasks that were originally planned for the first year of this 3 year project are to demonstrate that the fusogenic oncolytic herpes simplex viruses are potent anti-tumor agents for advanced ovarian cancer...

  5. Molecular Characterization of Prostate Cancer Cell Oncolysis by Herpes Simplex Virus ICP0 Mutants

    National Research Council Canada - National Science Library

    Mossman, Karen

    2005-01-01

    .... Briefly, the goals of the proposal were to characterize the oncolytic capacity of Herpes simplex virus type 1 ICPO mutants in prostate cancer cells given the relationship between ICPO and two tumor...

  6. Molecular Characterization of Prostate Cancer Cell Oncolysis by Herpes Simplex Virus ICP0 Mutants

    National Research Council Canada - National Science Library

    Mossman, Karen

    2006-01-01

    .... Briefly, the goals of the proposal were to characterize the oncolytic capacity of Herpes simplex virus type 1 ICP0 mutants in prostate cancer cells given the relationship between ICP0 and two tumor...

  7. Reactivation of latent herpes simplex virus infection by ultraviolet light: a human model

    International Nuclear Information System (INIS)

    Perna, J.J.; Mannix, M.L.; Rooney, J.F.; Notkins, A.L.; Straus, S.E.

    1987-01-01

    Infection with herpes simplex virus often results in a latent infection of local sensory ganglia and a disease characterized by periodic viral reactivation and mucocutaneous lesions. The factors that trigger reactivation in humans are still poorly defined. In our study, five patients with documented histories of recurrent herpes simplex virus infection on the buttocks or sacrum were exposed to three times their minimal erythema dose of ultraviolet light. Site-specific cutaneous herpes simplex virus infection occurred at 4.4 +/- 0.4 days after exposure to ultraviolet light in 8 of 13 attempts at reactivation. We conclude that ultraviolet light can reactivate herpes simplex virus under experimentally defined conditions. This model in humans should prove useful in evaluating the pathophysiology and prevention of viral reactivation

  8. Adenovirus, herpes simplex virus and cytomegalovirus infection in a lung transplant recipient

    Directory of Open Access Journals (Sweden)

    Sandhya Nagarakanti

    2018-01-01

    Full Text Available Allograft infections post lung transplantation have a significant impact on morbidity and mortality. We report a rare case of triple viral infection with adenovirus, Herpes Simplex virus (HSV and Cytomegalovirus (CMV in a lung transplant recipient.

  9. Heditary hypotrichosis simplex of the scalp: a report of 2 additional ...

    African Journals Online (AJOL)

    Abstract. Hereditary Hypotrichosis Simplex of the Scalp (HHSS) is a relatively rare form of hereditary alopecia. Herein, we report 2 additional families affected with this disorder. Sudanese Journal of Dermatology Vol. 3(3) 2005: 128-131 ...

  10. Graphs whose Complement and Square are Isomorphic (extended version)

    DEFF Research Database (Denmark)

    Pedersen, Anders Sune; Milanic, Martin; Verret, Gabriel

    2013-01-01

    We study square-complementary graphs, that is, graphs whose comple- ment and square are isomorphic. We prove several necessary conditions for a graph to be square-complementary, describe ways of building new square-complementary graphs from existing ones, construct innite families of square-compl...

  11. SQUARE WAVE VOLTAMMETRIC DETERMINATION OF LEAD IN ...

    African Journals Online (AJOL)

    2011-12-31

    Dec 31, 2011 ... ABSTRACT. A simple sensitive square wave voltammetric method for the determination of lead contamination of several kohl samples purchased from Algeria retail stores was developed using glassy carbon electrode. The peak current response of 5 standards aqueous solution of lead in NaNO3 as ...

  12. Dodecagonal Square-Triangle Tiling Growth Simulation

    International Nuclear Information System (INIS)

    Rubinstein, B; Ben-Abraham, S.

    1999-01-01

    Some alloy systems such as NiCr and VNiSi have quasicrystalline phases with twelve-fold symmetry. These can be interpreted in terms of dodecagonal tilings by squares and equilateral triangles. The formation of quasicrystals may be due to a number of mechanisms such as local growth rules, cluster covering, etc., which may act separately or in synergy. This research focuses on the growth of such dodecagonal quasicrystals as well as the abundance of their vertex configurations, both regular and defective. We have simulated growth from the melt under various conditions in order to find the minimal constraints necessary to produce realistic Patterns as well as realistic vertex statistics. We have also calculated the exact vertex frequencies of the ideal square-triangle tiling by relying on inflation symmetry. The simulation showed that unrestricted random growth typically results in phase separation of triangles from squares. Favoring triangles to attract squares and vice versa brings about nearly perfect patterns with nearly perfect vertex abundances and very realistic defect concentrations

  13. Clar sextets in square graphene antidot lattices

    DEFF Research Database (Denmark)

    Petersen, Rene; Pedersen, Thomas Garm; Jauho, Antti-Pekka

    2011-01-01

    A periodic array of holes transforms graphene from a semimetal into a semiconductor with a band gap tuneable by varying the parameters of the lattice. In earlier work only hexagonal lattices have been treated. Using atomistic models we here investigate the size of the band gap of a square lattice...

  14. Basis Properties of Third Order Magic Squares

    Indian Academy of Sciences (India)

    Home; Journals; Resonance – Journal of Science Education; Volume 11; Issue 9. Basis Properties of Third Order Magic Squares. Shailesh A Shirali. Classroom Volume 11 Issue 9 September 2006 pp 79-89. Fulltext. Click here to view fulltext PDF. Permanent link: http://www.ias.ac.in/article/fulltext/reso/011/09/0079-0089 ...

  15. Stochastic gradient versus recursive least squares learning

    Czech Academy of Sciences Publication Activity Database

    Slobodyan, Sergey; Bogomolova, Anna; Kolyuzhnov, Dmitri

    -, č. 309 (2006), s. 1-21 ISSN 1211-3298 Institutional research plan: CEZ:AV0Z70850503 Keywords : constant gain adaptive learning * stochastic gradient learning * recursive least squares Subject RIV: AH - Economics http://www.cerge-ei.cz/pdf/wp/Wp309.pdf

  16. Least-squares variance component estimation

    NARCIS (Netherlands)

    Teunissen, P.J.G.; Amiri-Simkooei, A.R.

    2007-01-01

    Least-squares variance component estimation (LS-VCE) is a simple, flexible and attractive method for the estimation of unknown variance and covariance components. LS-VCE is simple because it is based on the well-known principle of LS; it is flexible because it works with a user-defined weight

  17. Time Scale in Least Square Method

    Directory of Open Access Journals (Sweden)

    Özgür Yeniay

    2014-01-01

    Full Text Available Study of dynamic equations in time scale is a new area in mathematics. Time scale tries to build a bridge between real numbers and integers. Two derivatives in time scale have been introduced and called as delta and nabla derivative. Delta derivative concept is defined as forward direction, and nabla derivative concept is defined as backward direction. Within the scope of this study, we consider the method of obtaining parameters of regression equation of integer values through time scale. Therefore, we implemented least squares method according to derivative definition of time scale and obtained coefficients related to the model. Here, there exist two coefficients originating from forward and backward jump operators relevant to the same model, which are different from each other. Occurrence of such a situation is equal to total number of values of vertical deviation between regression equations and observation values of forward and backward jump operators divided by two. We also estimated coefficients for the model using ordinary least squares method. As a result, we made an introduction to least squares method on time scale. We think that time scale theory would be a new vision in least square especially when assumptions of linear regression are violated.

  18. Group-wise partial least square regression

    NARCIS (Netherlands)

    Camacho, José; Saccenti, Edoardo

    2018-01-01

    This paper introduces the group-wise partial least squares (GPLS) regression. GPLS is a new sparse PLS technique where the sparsity structure is defined in terms of groups of correlated variables, similarly to what is done in the related group-wise principal component analysis. These groups are

  19. Least-squares finite element methods

    CERN Document Server

    Bochev, Pavel

    2009-01-01

    Since their emergence, finite element methods have taken a place as one of the most versatile and powerful methodologies for the approximate numerical solution of Partial Differential Equations. This book presents the theory and practice of least-square finite element methods, their strengths and weaknesses, successes, and open problems

  20. Iterative methods for weighted least-squares

    Energy Technology Data Exchange (ETDEWEB)

    Bobrovnikova, E.Y.; Vavasis, S.A. [Cornell Univ., Ithaca, NY (United States)

    1996-12-31

    A weighted least-squares problem with a very ill-conditioned weight matrix arises in many applications. Because of round-off errors, the standard conjugate gradient method for solving this system does not give the correct answer even after n iterations. In this paper we propose an iterative algorithm based on a new type of reorthogonalization that converges to the solution.

  1. Herpes Simplex Virus 1 Interaction with Myeloid Cells In Vivo.

    Science.gov (United States)

    Shivkumar, Maitreyi; Lawler, Clara; Milho, Ricardo; Stevenson, Philip G

    2016-10-01

    Herpes simplex virus 1 (HSV-1) enters mice via olfactory epithelial cells and then colonizes the trigeminal ganglia (TG). Most TG nerve endings are subepithelial, so this colonization implies subepithelial viral spread, where myeloid cells provide an important line of defense. The outcome of infection of myeloid cells by HSV-1 in vitro depends on their differentiation state; the outcome in vivo is unknown. Epithelial HSV-1 commonly infected myeloid cells, and Cre-Lox virus marking showed nose and lung infections passing through LysM-positive (LysM(+)) and CD11c(+) cells. In contrast, subcapsular sinus macrophages (SSMs) exposed to lymph-borne HSV-1 were permissive only when type I interferon (IFN-I) signaling was blocked; normally, their infection was suppressed. Thus, the outcome of myeloid cell infection helped to determine the HSV-1 distribution: subepithelial myeloid cells provided a route of spread from the olfactory epithelium to TG neurons, while SSMs blocked systemic spread. Herpes simplex virus 1 (HSV-1) infects most people and can cause severe disease. This reflects its persistence in nerve cells that connect to the mouth, nose, eye, and face. Established infection seems impossible to clear. Therefore, we must understand how it starts. This is difficult in humans, but mice show HSV-1 entry via the nose and then spread to its preferred nerve cells. We show that this spread proceeds in part via myeloid cells, which normally function in host defense. Myeloid infection was productive in some settings but was efficiently suppressed by interferon in others. Therefore, interferon acting on myeloid cells can stop HSV-1 spread, and enhancing this defense offers a way to improve infection control. Copyright © 2016, American Society for Microbiology. All Rights Reserved.

  2. Inhibition of herpes simplex virus replication by tobacco extracts.

    Science.gov (United States)

    Hirsch, J M; Svennerholm, B; Vahlne, A

    1984-05-01

    Herpes simplex virus type 1 (HSV-1) has been associated with the genesis of leukoplakias, epithelial atypia, and oral cancer. Tobacco habits, such as snuff dipping, are also definitely correlated with this type of lesion. The normal cytolytic HSV-1 infection can, after in vitro inactivation, transform cells. Extracts of snuff were prepared and assayed for their ability to inhibit HSV-1 replication. Plaque formation assays of HSV-1 in the presence of snuff extract showed that a reduced number of plaques was formed. Different batches of one brand of snuff were tested for inhibition of herpes simplex virus (HSV) production. More than 99% inhibition of 24-hr HSV production was obtained with undiluted batches. The 1:5 dilutions of snuff had an inhibitory effect of 85% and 1:25 dilutions, 39%. In agreement, the attachment of the virus to the host cell and penetration of the virus to the cell nuclei were found to be inhibited as was the synthesis of viral DNA. Nicotine had an inhibitory effect, while aromatic additions to snuff were found to have no major inhibitory effect on HSV replication. Snuff extracts were prepared from different brands of snuff reported to contain high and low quantities of tobacco-specific N-nitrosamines. Brands with reported high levels of tobacco-specific N-nitrosamines had significantly greater ability to inhibit HSV replication. In conclusion, this study has shown that extracts of snuff have inhibitory effects on the production of cytolytic HSV-1 infections. A chronic snuff dipper keeps tobacco in the mouth for the major part of the day. Thus, virus shed in the oral cavity in connection with a reactivated latent HSV-1 infection has great possibilities of being affected by snuff or derivatives of snuff. It is suggested that an interaction between tobacco products and HSV-1 might be involved in the development of dysplastic lesions in the oral cavity.

  3. Von Willebrand Factor Gene Variants Associate with Herpes simplex Encephalitis.

    Directory of Open Access Journals (Sweden)

    Nada Abdelmagid

    Full Text Available Herpes simplex encephalitis (HSE is a rare complication of Herpes simplex virus type-1 infection. It results in severe parenchymal damage in the brain. Although viral latency in neurons is very common in the population, it remains unclear why certain individuals develop HSE. Here we explore potential host genetic variants predisposing to HSE. In order to investigate this we used a rat HSE model comparing the HSE susceptible SHR (Spontaneously Hypertensive Rats with the asymptomatic infection of BN (Brown Norway. Notably, both strains have HSV-1 spread to the CNS at four days after infection. A genome wide linkage analysis of 29 infected HXB/BXH RILs (recombinant inbred lines-generated from the prior two strains, displayed variable susceptibility to HSE enabling the definition of a significant QTL (quantitative trait locus named Hse6 towards the end of chromosome 4 (160.89-174Mb containing the Vwf (von Willebrand factor gene. This was the only gene in the QTL with both cis-regulation in the brain and included several non-synonymous SNPs (single nucleotide polymorphism. Intriguingly, in human chromosome 12 several SNPs within the intronic region between exon 43 and 44 of the VWF gene were associated with human HSE pathogenesis. In particular, rs917859 is nominally associated with an odds ratio of 1.5 (95% CI 1.11-2.02; p-value = 0.008 after genotyping in 115 HSE cases and 428 controls. Although there are possibly several genetic and environmental factors involved in development of HSE, our study identifies variants of the VWF gene as candidates for susceptibility in experimental and human HSE.

  4. Photodynamic treatment of Herpes simplex virus infection in vitro

    International Nuclear Information System (INIS)

    Lytle, C.D.; Hester, L.D.

    1976-01-01

    The effects of photodynamic action on in vitro herpes simplex virus infections of CV-1 monkey kidney fibroblasts or human skin fibroblasts were determined using proflavine sulfate and white fluorescent lamps. Photodynamic treatment of confluent cell monolayers prior to virus infection inactivated cell capacity, i.e. the capacity of the treated cells to support subsequent virus growth as measured by plaque formation. The capacity of human cells was more sensitive to inactivation than the capacity of monkey cells when 6 μM proflavine was used. Treated cell monolayers recovered the capacity to support virus plaque formation when virus infection was delayed four days after the treatment. Experiments in which the photodynamically treated monolayers were infected with UV-irradiated virus demonstrated that this treatment induced Weigle reactivation in both types of cells. This reactivation occurred for virus infection just after treatment or 4 days later. A Luria-Latarjet-type experiment was also performed in which cultures infected with unirradiated virus were photodynamically treated at different times after the start of infection. The results showed that for the first several hours of the virus infection the infected cultures were more sensitive to inactivation by photodynamic treatment than cell capacity. By the end of the eclipse period the infected cultures were less sensitive to inactivation than cell capacity. Results from extracellular inactivation of virus growth in monkey cells at 6 μM proflavine indicated that at physiological pH the virus has a sensitivity to photodynamic inactivation similar to that for inactivation of cell capacity. The combined data indicated that photodynamic treatment of the cell before or after virus infection could prevent virus growth. Thus, photodynamic inactivation of infected and uninfected cells may be as important as inactivation of virus particles when considering possible mechanisms in clinical photodynamic therapy for herpes

  5. Hospital risk management of cutaneous herpes simplex virus infection.

    Science.gov (United States)

    Zhu, F; Zhang, J; Feng, J; Yang, H

    2016-10-01

    The epidemiology of cutaneous herpes simplex infection (CHSI) has dramatically changed over the past several decades. Valaciclovir is one of a new generation of antiviral medications that has expanded treatment options for the most common cutaneous manifestations of herpes simplex virus. However, the efficacy and safety of formulations with different doses of valaciclovir remain unclear. To carry out hospital risk management by ascertaining the incidence and risk of CHSI in patients during treatment with varying doses of valaciclovir. The PubMed, MEDLINE and Web of Science electronic databases were systematically searched from database inception to date of searching. Efficacy of drug treatment was measured by average easement score (AES). Safety was characterized as the proportion of patients with drug adverse reactions (DARs) such as fever, dizziness, headache, anxiety, irritability and yellowing of the skin. Outcomes for continuous and dichotomous data were estimated by standard mean difference (SMD) and risk ratio (RR), respectively. Five randomized controlled trials involving 1753 randomized participants for efficacy assessment and 1874 randomized participants for safety assessment were identified. Valaciclovir dose increasing from 1000 mg/day improved AES only moderately, but significantly promoted the incidence of DARs. Twice-daily treatment showed no increase in therapeutic effect but greatly increased DAR incidence. The valaciclovir dose that produced a reduction in AES was 1000 mg/day: SMD = -0.73 (95% CI -0.98 to 0.48; P < 0.01) and RR = 0.95 (95% CI 0.81-1.09; P < 0.002). Increasing the daily dose of valaciclovir does not substantially improve therapeutic efficacy for CHSI but may raise DAR incidence. Drug doses of 1000 and 2000 mg/day show no significant difference in efficacy scores, but the latter exhibits a higher incidence of DARs. The dose-dependent, long-term efficacy and safety of valaciclovir remain to be explored. © 2016 British Association of

  6. Detection of Herplex Simplex Virus-1 and -2 in Cardiac Myxomas

    Directory of Open Access Journals (Sweden)

    Ioannis S. Pateras

    2012-01-01

    Full Text Available The etiology of sporadic cardiac myxomas remains elusive. The tendency for these lesions to recur following resection, their immunopathological characteristics, along with their histological and molecular profile, may implicate the presence of an infective agent in this type of tumor. In this study, we investigated the presence of herpes simplex virus (HSV DNA in a cohort of cardiac myxomas in a tertiary referral centre. Twenty-nine formalin-fixed paraffin-embedded (FFPE sporadic cardiac myxomas were obtained, 17 of which were shown to be informative. These were compared to 19 macroscopically and microscopically normal heart tissue specimens. The detection of HSV-1 and -2 genomic sequences was achieved with the use of a combined nested PCR-Restriction Fragment Length Polymorphism methodology. The presence of HSV-1 and/or -2 DNA was demonstrated in 6 of 17 (35% informative sporadic cardiac myxomas, whereas no HSV DNA was detected in normal heart tissues (P<0.01. The existence of HSV-1/2 DNA in sporadic cardiac myxomas, along with its absence from normal heart tissues, reinforces the possibility that HSV infection might be involved in the development of these lesions. Our findings raise the point of anti-HSV medication postsurgically with a potential benefit in reducing the rate of recurrences.

  7. Antiviral Action of Hydromethanolic Extract of Geopropolis from Scaptotrigona postica against Antiherpes Simplex Virus (HSV-1

    Directory of Open Access Journals (Sweden)

    Guilherme Rabelo Coelho

    2015-01-01

    Full Text Available The studies on chemical composition and biological activity of propolis had focused mainly on species Apis mellifera L. (Hymenoptera: Apidae. There are few studies about the uncommon propolis collected by stingless bees of the Meliponini tribe known as geopropolis. The geopropolis from Scaptotrigona postica was collected in the region of Barra do Corda, Maranhão state, Brazil. The chemical analysis of hydromethanolic extract of this geopropolis (HMG was carried out through HPLC-DAD-ESI-MS/MS and the main constituents found were pyrrolizidine alkaloids and C-glycosyl flavones. The presence of alkaloids in extracts of propolis is detected for the first time in this sample. The antiviral activity of HMG was evaluated through viral DNA quantification experiments and electron microscopy experiments. Quantification of viral DNA from herpes virus showed reduction of about 98% in all conditions and concentration tested of the HMG extract. The results obtained were corroborated by transmission electron microscopy, in which the images did not show particle or viral replication complex. The antiviral activity of C-glycosyl flavones was reported for a variety of viruses, being observed at different points in the viral replication. This work is the first report about the antiviral activity of geopropolis from Scaptotrigona postica, in vitro, against antiherpes simplex virus (HSV.

  8. Atypical oral presentation of herpes simplex virus infection in a patient after orthotopic liver transplantation.

    Science.gov (United States)

    Burke, E M; Karp, D L; Wu, T C; Corio, R L

    1994-01-01

    An atypical oral presentation of herpes simplex virus infection in a 49-year-old woman after orthotopic liver transplantation is reported. Clinically, the differential diagnosis included chronic hyperplastic candidiasis, nodular leukoplakia of undetermined etiology, and malignant neoplasm. An excisional biopsy revealed herpesvirus infection, and immunoperoxidase staining confirmed herpes simplex virus infection. This report describes the clinical and histologic appearance of these lesions and the course and treatment of the patient.

  9. Herpes simplex virus type 2: Cluster of unrelated cases in an intensive care unit.

    Science.gov (United States)

    Troché, Gilles; Marque Juillet, Stephanie; Burrel, Sonia; Boutolleau, David; Bédos, Jean-Pierre; Legriel, Stephane

    2016-10-01

    Herpes simplex viruses, which are associated with various clinical manifestations, can be transmitted to critically ill patients from other patients or health care staff. We report an apparent outbreak of mucocutaneous herpes simplex virus 2 infections (5 cases in 10 weeks). An epidemiologic investigation and genotype analysis showed no connections among the 5 cases. Copyright © 2016 Association for Professionals in Infection Control and Epidemiology, Inc. Published by Elsevier Inc. All rights reserved.

  10. The response and detoxification strategies of three freshwater phytoplankton species, Aphanizomenon flos-aquae, Pediastrum simplex, and Synedra acus, to cadmium.

    Science.gov (United States)

    Ran, Xiaofei; Yue, Hong; Fu, Xiaoli; Kang, Yuanhao; Xu, Sha; Yang, Yanjun; Xu, Jinzhu; Shi, Junqiong; Wu, Zhongxing

    2015-12-01

    The response and detoxification mechanisms of three freshwater phytoplankton species (the cyanobacterium Aphanizomenon flos-aquae, the green alga Pediastrum simplex, and the diatom Synedra acus) to cadmium (Cd) were investigated. The cell growth of each species was measured over 10 days, and chlorophyll a fluorescence, Cd bioaccumulation (including surface-adsorbed and intracellular Cd), and phytochelatin (PC) synthesis were determined after 96-h exposures. The growth of the three phytoplankton species was significantly inhibited when Cd concentrations were ≥5 mg L(-1). Compared with P. simplex, greater growth inhibition in S. acus and A. flos-aquae occurred. The changes in chlorophyll fluorescence parameters including the maximal quantum yield of PSII (Fv/Fm) and relative variable fluorescence of the J point (Vj) demonstrated that the increase in Cd concentration damaged PSII in all three species. After 96-h exposures, the accumulation of surface-adsorbed Cd and intracellular Cd increased significantly in all three species, with the increase of Cd concentrations in the media; total cadmium accumulation was 245, 658, and 1670 times greater than that of the control in A. flos-aquae, P. simplex, and S. acus, respectively, after exposure to 10 mg L(-1). Total thiols exhibited a similar trend to that of Cd accumulation. PC3 was found in A. flos-aquae and P. simplex in all Cd treatments. Glutathione (GSH) and PC2 were also produced in response to exposure to high concentrations of Cd. PC4 was only discovered at exposure concentrations of 10 mg L(-1) Cd and only in S. acus. The intracellular Cd/PCs ratio increased in all three phytoplankton with an increase in Cd concentrations, and a linear relationship between the ratio and the growth inhibition rates was observed with P. simplex and S. acus. Our results have demonstrated that metal detoxification mechanisms were dependent on the species. This study suggested that the variance of metal detoxification strategies, such

  11. Groupwise Retargeted Least-Squares Regression.

    Science.gov (United States)

    Wang, Lingfeng; Pan, Chunhong

    2018-04-01

    In this brief, we propose a new groupwise retargeted least squares regression (GReLSR) model for multicategory classification. The main motivation behind GReLSR is to utilize an additional regularization to restrict the translation values of ReLSR, so that they should be similar within same class. By analyzing the regression targets of ReLSR, we propose a new formulation of ReLSR, where the translation values are expressed explicitly. On the basis of the new formulation, discriminative least-squares regression can be regarded as a special case of ReLSR with zero translation values. Moreover, a groupwise constraint is added to ReLSR to form the new GReLSR model. Extensive experiments on various machine leaning data sets illustrate that our method outperforms the current state-of-the-art approaches.

  12. Total least squares for anomalous change detection

    Science.gov (United States)

    Theiler, James; Matsekh, Anna M.

    2010-04-01

    A family of subtraction-based anomalous change detection algorithms is derived from a total least squares (TLSQ) framework. This provides an alternative to the well-known chronochrome algorithm, which is derived from ordinary least squares. In both cases, the most anomalous changes are identified with the pixels that exhibit the largest residuals with respect to the regression of the two images against each other. The family of TLSQbased anomalous change detectors is shown to be equivalent to the subspace RX formulation for straight anomaly detection, but applied to the stacked space. However, this family is not invariant to linear coordinate transforms. On the other hand, whitened TLSQ is coordinate invariant, and special cases of it are equivalent to canonical correlation analysis and optimized covariance equalization. What whitened TLSQ offers is a generalization of these algorithms with the potential for better performance.

  13. Least Squares Moving-Window Spectral Analysis.

    Science.gov (United States)

    Lee, Young Jong

    2017-08-01

    Least squares regression is proposed as a moving-windows method for analysis of a series of spectra acquired as a function of external perturbation. The least squares moving-window (LSMW) method can be considered an extended form of the Savitzky-Golay differentiation for nonuniform perturbation spacing. LSMW is characterized in terms of moving-window size, perturbation spacing type, and intensity noise. Simulation results from LSMW are compared with results from other numerical differentiation methods, such as single-interval differentiation, autocorrelation moving-window, and perturbation correlation moving-window methods. It is demonstrated that this simple LSMW method can be useful for quantitative analysis of nonuniformly spaced spectral data with high frequency noise.

  14. Optical inverse-square displacement sensor

    Science.gov (United States)

    Howe, R.D.; Kychakoff, G.

    1989-09-12

    This invention comprises an optical displacement sensor that uses the inverse-square attenuation of light reflected from a diffused surface to calculate the distance from the sensor to the reflecting surface. Light emerging from an optical fiber or the like is directed onto the surface whose distance is to be measured. The intensity I of reflected light is angle dependent, but within a sufficiently small solid angle it falls off as the inverse square of the distance from the surface. At least a pair of optical detectors are mounted to detect the reflected light within the small solid angle, their ends being at different distances R and R + [Delta]R from the surface. The distance R can then be found in terms of the ratio of the intensity measurements and the separation length as given in an equation. 10 figs.

  15. Simple shear of deformable square objects

    Science.gov (United States)

    Treagus, Susan H.; Lan, Labao

    2003-12-01

    Finite element models of square objects in a contrasting matrix in simple shear show that the objects deform to a variety of shapes. For a range of viscosity contrasts, we catalogue the changing shapes and orientations of objects in progressive simple shear. At moderate simple shear ( γ=1.5), the shapes are virtually indistinguishable from those in equivalent pure shear models with the same bulk strain ( RS=4), examined in a previous study. In theory, differences would be expected, especially for very stiff objects or at very large strain. In all our simple shear models, relatively competent square objects become asymmetric barrel shapes with concave shortened edges, similar to some types of boudin. Incompetent objects develop shapes surprisingly similar to mica fish described in mylonites.

  16. Elastic least-squares reverse time migration

    KAUST Repository

    Feng, Zongcai

    2016-09-06

    Elastic least-squares reverse time migration (LSRTM) is used to invert synthetic particle-velocity data and crosswell pressure field data. The migration images consist of both the P- and Svelocity perturbation images. Numerical tests on synthetic and field data illustrate the advantages of elastic LSRTM over elastic reverse time migration (RTM). In addition, elastic LSRTM images are better focused and have better reflector continuity than do the acoustic LSRTM images.

  17. Advancing Astrophysics with the Square Kilometre Array

    CERN Document Server

    Fender, Rob; Govoni, Federica; Green, Jimi; Hoare, Melvin; Jarvis, Matt; Johnston-Hollitt, Melanie; Keane, Evan; Koopmans, Leon; Kramer, Michael; Maartens, Roy; Macquart, Jean-Pierre; Mellema, Garrelt; Oosterloo, Tom; Prandoni, Isabella; Pritchard, Jonathan; Santos, Mario; Seymour, Nick; Stappers, Ben; Staveley-Smith, Lister; Tian, Wen Wu; Umana, Grazia; Wagg, Jeff; Bourke, Tyler L; AASKA14

    2015-01-01

    In 2014 it was 10 years since the publication of the comprehensive ‘Science with the Square Kilometre Array’ book and 15 years since the first such volume appeared in 1999. In that time numerous and unexpected advances have been made in the fields of astronomy and physics relevant to the capabilities of the Square Kilometre Array (SKA). The SKA itself progressed from an idea to a developing reality with a baselined Phase 1 design (SKA1) and construction planned from 2017. To facilitate the publication of a new, updated science book, which will be relevant to the current astrophysical context, the meeting "Advancing Astrophysics with the Square Kilometre Array" was held in Giardina Naxos, Sicily. Articles were solicited from the community for that meeting to document the scientific advances enabled by the first phase of the SKA and those pertaining to future SKA deployments, with expected gains of 5 times the Phase 1 sensitivity below 350 MHz, about 10 times the Phase 1 sensitivity above 350 MHz and with f...

  18. Use and Subtleties of Saddlepoint Approximation for Minimum Mean-Square Error Estimation

    DEFF Research Database (Denmark)

    Beierholm, Thomas; Nuttall, Albert H.; Hansen, Lars Kai

    2008-01-01

    An integral representation for the minimum mean-square error (MMSE) estimator for a random variable in an observation model consisting of a linear combination of two random variables is derived. The derivation is based on the moment-generating functions for the random variables in the observation...... integral representation. However, the examples also demonstrate that when two saddle points are close or coalesce, then saddle-point approximation based on isolated saddle points is not valid. A saddle-point approximation based on two close or coalesced saddle points is derived and in the examples...

  19. Squares as tools for urban transformation: Foundations for designing the Iranian public squares

    OpenAIRE

    Mehan, Asma

    2016-01-01

    The very concept of Public Square as microcosms of urban life and social relations has been transformed dramatically, especially in modern Iran. This article investigates the most dominant foundations, abstract ideas, ideologies and power relations that influenced the Iranian Public Squares' designing. By considering the changing foundations for ideology and power relations, and their impact on urban form, this research follows the history and development of Iranian urbanism. Building on thes...

  20. Lax-pair operators for squared-sum and squared-difference eigenfunctions

    International Nuclear Information System (INIS)

    Ichikawa, Yoshihiko; Iino, Kazuhiro.

    1984-10-01

    Inter-relationship between various representations of the inverse scattering transformation is established by examining eigenfunctions of Lax-pair operators of the sine-Gordon equation and the modified Korteweg-de Vries equation. In particular, it is shown explicitly that there exists Lax-pair operators for the squared-sum and squared-difference eigenfunctions of the Ablowitz-Kaup-Newell-Segur inverse scattering transformation. (author)

  1. Leonardo Pisano (Fibonacci) the book of squares

    CERN Document Server

    Sigler, L E

    1987-01-01

    The Book of Squares by Fibonacci is a gem in the mathematical literature and one of the most important mathematical treatises written in the Middle Ages. It is a collection of theorems on indeterminate analysis and equations of second degree which yield, among other results, a solution to a problem proposed by Master John of Palermo to Leonardo at the Court of Frederick II. The book was dedicated and presented to the Emperor at Pisa in 1225. Dating back to the 13th century the book exhibits the early and continued fascination of men with our number system and the relationship among numbers

  2. Optimistic semi-supervised least squares classification

    DEFF Research Database (Denmark)

    Krijthe, Jesse H.; Loog, Marco

    2017-01-01

    The goal of semi-supervised learning is to improve supervised classifiers by using additional unlabeled training examples. In this work we study a simple self-learning approach to semi-supervised learning applied to the least squares classifier. We show that a soft-label and a hard-label variant...... of self-learning can be derived by applying block coordinate descent to two related but slightly different objective functions. The resulting soft-label approach is related to an idea about dealing with missing data that dates back to the 1930s. We show that the soft-label variant typically outperforms...

  3. Nonlinear least squares and super resolution

    Energy Technology Data Exchange (ETDEWEB)

    Chung, J; Nagy, J G [Department of Mathematics and Computer Science Emory University Atlanta, GA, 30322 (United States)], E-mail: jmchung@mathcs.emory.edu, E-mail: nagy@mathcs.emory.edu

    2008-07-15

    Digital super resolution is a term used to describe the inverse problem of reconstructing a high resolution image from a set of known low resolution images, each of which is shifted by subpixel displacements. Simple models assume the subpixel displacements are known, but if the displacements are not known then nonlinear approaches must be used to jointly find the displacements and the reconstructed high resolution image. Furthermore, regularization is needed to stabilize the inversion process. This paper describes a separable nonlinear least squares formulation and a solution scheme based on the Gauss-Newton method. In addition, an approach is proposed to choose appropriate regularization parameters at each Gauss-Newton iteration.

  4. Exploiting Herpes Simplex Virus Entry for Novel Therapeutics

    Directory of Open Access Journals (Sweden)

    Deepak Shukla

    2013-06-01

    Full Text Available Herpes Simplex virus (HSV is associated with a variety of diseases such as genital herpes and numerous ocular diseases. At the global level, high prevalence of individuals who are seropositive for HSV, combined with its inconspicuous infection, remains a cause for major concern. At the molecular level, HSV entry into a host cell involves multiple steps, primarily the interaction of viral glycoproteins with various cell surface receptors, many of which have alternate substitutes. The molecular complexity of the virus to enter a cell is also enhanced by the existence of different modes of viral entry. The availability of many entry receptors, along with a variety of entry mechanisms, has resulted in a virus that is capable of infecting virtually all cell types. While HSV uses a wide repertoire of viral and host factors in establishing infection, current therapeutics aimed against the virus are not as diversified. In this particular review, we will focus on the initial entry of the virus into the cell, while highlighting potential novel therapeutics that can control this process. Virus entry is a decisive step and effective therapeutics can translate to less virus replication, reduced cell death, and detrimental symptoms.

  5. Generating Selected Color using RGB, Auxiliary Lights, and Simplex Search

    Directory of Open Access Journals (Sweden)

    Kim HyungTae

    2015-01-01

    Full Text Available A mixed light source generates various colors, with the potential to adjust intensities of multiple LEDs, which makes it possible to generate arbitrary colors. Currently, PCs and OSs provide color selection windows that can obtain the RGB or HSL color coordinates of a user’s selection. Mixed light sources are usually composed of LEDs in the primary colors, with LEDs in auxiliary colors such as white and yellow used in a few cases. When using auxiliary color LEDs, the number of LED inputs, the dimming levels, is larger than the number of elements in the color coordinate, which causes an under-determined problem. This study proposed how to determine the dimming levels of LEDs based on the selected color. Commercial LEDs have di_erent optical power values and impure color coordinates, even if they are RGB. Hence, the characteristics of the LEDs were described using a linear model derived from the tri-stimulus values (an XYZ color coordinate model and dimming levels. Color mixing models were derived for the arbitrary number of auxiliary color LEDs. The under-determined problem was solved using a simplex search method without an inverse matrix operation. The proposed method can be applied to a machine vision system and an RGBW light mixer for semiconductor inspection. The dimming levels, obtained using the proposed method were better than derived using other methods.

  6. Herpes Simplex Virus Type 1 Infection Associated with Atrial Myxoma

    Science.gov (United States)

    Li, Yanwen; Pan, Zhigang; Ji, Yuan; Sheppard, Mary; Jeffries, Donald J.; Archard, Leonard C.; Zhang, Hongyi

    2003-01-01

    Some findings suggest an infectious factor in cardiac myxoma and certain histopathological features indicate herpes simplex virus type 1 (HSV-1) infection. We hypothesized that HSV-1 may be involved in the pathogenesis of cardiac myxoma. Paraffin-embedded tissue samples from 17 patients with atrial myxoma were investigated for HSV-1 antigen by immunohistochemistry and viral genomic DNA by nested polymerase chain reaction. The histogenesis and oncogenesis of atrial myxoma were assessed by the expression of calretinin, Ki67, and p53 protein, respectively. Autopsy myocardial samples, including endocardium from 12 patients who died by accident or other conditions, were used for comparison. HSV-1 antigen was detected in atrial myxoma from 12 of 17 patients: 8 of these 12 samples were positive also for HSV-1 DNA. No HSV-1 antigen or DNA was found in tissue from the comparison group. Antigens of HSV-2, varicella-zoster virus, Epstein-Barr virus, and cytomegalovirus were not found in atrial myxoma. Calretinin was found in myxoma cells of all 17 cases but Ki67 was present only in smooth muscle cells or infiltrating cells in some cases. p53 was not detectable in any myxoma. Most infiltrating cells were cytotoxic T lymphocytes. These data suggest that HSV-1 infection is associated with some cases of sporadic atrial myxoma and that these may result from a chronic inflammatory lesion of endocardium. PMID:14633612

  7. Detection of Herpes Simplex Virus DNA in Pseudoexfoliation Syndrome

    Directory of Open Access Journals (Sweden)

    Masoomeh Eghtedari

    2009-06-01

    Full Text Available Background: Pseudoexfoliation syndrome is one of the mostcommon identifiable causes of open angle glaucoma. It hasunknown etiology and pathogenesis. Infection, possibly viral,is one of the proposed pathogenic mechanisms in this condition.In the present study the presence of herpes simplex virus(HSV in specimens of anterior lens capsule of patients withpseudoexfoliation syndrome has been assessed.Methods: The presence of HSV- DNA was searched by usingpolymerase chain reaction method in specimens of anteriorlens capsule (5 mm diameter of 50 patients with pseudoexfoliationsyndrome (study group and 50 age-matchedpatients without the disease (control group who underwentcataract or combined cataract and glaucoma surgery duringa one-year (2006-2007 period in Khalili Hospital, Shiraz,Iran. The results were compared statistically with Chisquaretest and independent samples t test using SPSS software(version 11.5.Results: HSV type I DNA was detected in 18% of the patientsin the study group compared with 2% in the control group (Chisquare test, P = 0.008. The difference between the ranges ofintraocular pressure in the two groups was not statistically significant.Conclusion: The presence of HSV type I DNA suggests thepossible relationship between the virus and pseudoexfoliationsyndrome. It may be a treatable etiology in this multi-factorialdisorder and may help to future management of patients; especiallyto prevent some of the complications in this syndrome.

  8. Rubella, herpes simplex virus type 2 and preeclampsia.

    Science.gov (United States)

    Alshareef, Shimos A; Eltom, Ahmed M; Nasr, Abubakr M; Hamdan, Hamdan Z; Adam, Ishag

    2017-07-26

    Preeclampsia is a major health problem. Although, the pathophysiology of preeclampsia is not fully understood, there are recent studies on association between infections and preeclampsia. The aim of the present study was to investigate the association between maternal seropositivity of rubella, Herpes simplex virus type 2 (HSV-2) and preeclampsia. A case -controls study (90 women in each arm) was conducted at Saad Abualila Maternity Hospital, Khartoum, Sudan. The cases were women with preeclampsia and the controls were healthy pregnant women. Rubella and HSV-2 IgG antibodies were analysed in the maternal sera of all of the participants using ELISA. There was no significant difference in the age, parity and gestational age between the two groups. Maternal serum IgG seropositivity for rubella (92.2% vs. 34.4%, P rubella (3.3% vs. 2.2%, P = 0.650) and HSV-2 (2.2% vs. 1.1%, P = 0.560). All the IgM seropositive cases were IgG seropositive too. In binary logistic regression women with rubella (OR = 4.93; 95% CI = 2.082-11.692, P rubella and HSV-2 IgG seropositivity is associated with preeclampsia. Preventive measure should be implemented.

  9. Higher Throughput Quantification of Neutralizing Antibody to Herpes Simplex Viruses.

    Directory of Open Access Journals (Sweden)

    Tamara P Blevins

    Full Text Available We report a rapid, higher throughput method for measuring neutralizing antibody to herpes simplex virus (HSV in human sera. Clinical isolates and sera from the Herpevac Trial for Women were used in a colorimetric assay in which infection of tissue culture (lack of neutralization was indicated by substrate metabolism by beta-galactosidase induced in the ELVIS cell line. The neutralization assay was optimized by addition of guinea pig complement, which particularly enhanced neutralizing antibody titers to HSV-2. Higher neutralizing antibody titers were also achieved using virus particles isolated from the supernatant of infected cells rather than lysate of infected cells as the source of virus. The effect of assay incubation time and incubation time with substrate were also optimized. We found that incubating with substrate until a standard optical density of 1.0 was reached permitted a better comparison among virus isolates, and achieved reliable measurement of neutralizing antibody activity. Interestingly, in contrast to results in the absence of complement, addition of complement allowed sera from HSV-2 gD-vaccinated subjects to neutralize HSV-1 and HSV-2 clinical and laboratory isolates with equal potency.

  10. Stabilising the Herpes Simplex Virus capsid by DNA packaging

    Science.gov (United States)

    Wuite, Gijs; Radtke, Kerstin; Sodeik, Beate; Roos, Wouter

    2009-03-01

    Three different types of Herpes Simplex Virus type 1 (HSV-1) nuclear capsids can be distinguished, A, B and C capsids. These capsids types are, respectively, empty, contain scaffold proteins, or hold DNA. We investigate the physical properties of these three capsids by combining biochemical and nanoindentation techniques. Atomic Force Microscopy (AFM) experiments show that A and C capsids are mechanically indistinguishable whereas B capsids already break at much lower forces. By extracting the pentamers with 2.0 M GuHCl or 6.0 M Urea we demonstrate an increased flexibility of all three capsid types. Remarkably, the breaking force of the B capsids without pentamers does not change, while the modified A and C capsids show a large drop in their breaking force to approximately the value of the B capsids. This result indicates that upon DNA packaging a structural change at or near the pentamers occurs which mechanically reinforces the capsids structure. The reported binding of proteins UL17/UL25 to the pentamers of the A and C capsids seems the most likely candidate for such capsids strengthening. Finally, the data supports the view that initiation of DNA packaging triggers the maturation of HSV-1 capsids.

  11. Inhibitors of Nucleotidyltransferase Superfamily Enzymes Suppress Herpes Simplex Virus Replication

    Science.gov (United States)

    Wang, Hong; Tollefson, Ann E.; Ying, Baoling; Korom, Maria; Cheng, Xiaohong; Cao, Feng; Davis, Katie L.; Wold, William S. M.

    2014-01-01

    Herpesviruses are large double-stranded DNA viruses that cause serious human diseases. Herpesvirus DNA replication depends on multiple processes typically catalyzed by nucleotidyltransferase superfamily (NTS) enzymes. Therefore, we investigated whether inhibitors of NTS enzymes would suppress replication of herpes simplex virus 1 (HSV-1) and HSV-2. Eight of 42 NTS inhibitors suppressed HSV-1 and/or HSV-2 replication by >10-fold at 5 μM, with suppression at 50 μM reaching ∼1 million-fold. Five compounds in two chemical families inhibited HSV replication in Vero and human foreskin fibroblast cells as well as the approved drug acyclovir did. The compounds had 50% effective concentration values as low as 0.22 μM with negligible cytotoxicity in the assays employed. The inhibitors suppressed accumulation of viral genomes and infectious particles and blocked events in the viral replication cycle before and during viral DNA replication. Acyclovir-resistant mutants of HSV-1 and HSV-2 remained highly sensitive to the NTS inhibitors. Five of six NTS inhibitors of the HSVs also blocked replication of another herpesvirus pathogen, human cytomegalovirus. Therefore, NTS enzyme inhibitors are promising candidates for new herpesvirus treatments that may have broad efficacy against members of the herpesvirus family. PMID:25267681

  12. Evolution and Diversity in Human Herpes Simplex Virus Genomes

    Science.gov (United States)

    Gatherer, Derek; Ochoa, Alejandro; Greenbaum, Benjamin; Dolan, Aidan; Bowden, Rory J.; Enquist, Lynn W.; Legendre, Matthieu; Davison, Andrew J.

    2014-01-01

    Herpes simplex virus 1 (HSV-1) causes a chronic, lifelong infection in >60% of adults. Multiple recent vaccine trials have failed, with viral diversity likely contributing to these failures. To understand HSV-1 diversity better, we comprehensively compared 20 newly sequenced viral genomes from China, Japan, Kenya, and South Korea with six previously sequenced genomes from the United States, Europe, and Japan. In this diverse collection of passaged strains, we found that one-fifth of the newly sequenced members share a gene deletion and one-third exhibit homopolymeric frameshift mutations (HFMs). Individual strains exhibit genotypic and potential phenotypic variation via HFMs, deletions, short sequence repeats, and single-nucleotide polymorphisms, although the protein sequence identity between strains exceeds 90% on average. In the first genome-scale analysis of positive selection in HSV-1, we found signs of selection in specific proteins and residues, including the fusion protein glycoprotein H. We also confirmed previous results suggesting that recombination has occurred with high frequency throughout the HSV-1 genome. Despite this, the HSV-1 strains analyzed clustered by geographic origin during whole-genome distance analysis. These data shed light on likely routes of HSV-1 adaptation to changing environments and will aid in the selection of vaccine antigens that are invariant worldwide. PMID:24227835

  13. Higher Throughput Quantification of Neutralizing Antibody to Herpes Simplex Viruses.

    Science.gov (United States)

    Blevins, Tamara P; Mitchell, Michelle C; Korom, Maria; Wang, Hong; Yu, Yinyi; Morrison, Lynda A; Belshe, Robert B

    2015-01-01

    We report a rapid, higher throughput method for measuring neutralizing antibody to herpes simplex virus (HSV) in human sera. Clinical isolates and sera from the Herpevac Trial for Women were used in a colorimetric assay in which infection of tissue culture (lack of neutralization) was indicated by substrate metabolism by beta-galactosidase induced in the ELVIS cell line. The neutralization assay was optimized by addition of guinea pig complement, which particularly enhanced neutralizing antibody titers to HSV-2. Higher neutralizing antibody titers were also achieved using virus particles isolated from the supernatant of infected cells rather than lysate of infected cells as the source of virus. The effect of assay incubation time and incubation time with substrate were also optimized. We found that incubating with substrate until a standard optical density of 1.0 was reached permitted a better comparison among virus isolates, and achieved reliable measurement of neutralizing antibody activity. Interestingly, in contrast to results in the absence of complement, addition of complement allowed sera from HSV-2 gD-vaccinated subjects to neutralize HSV-1 and HSV-2 clinical and laboratory isolates with equal potency.

  14. Bioreactor production of recombinant herpes simplex virus vectors.

    Science.gov (United States)

    Knop, David R; Harrell, Heather

    2007-01-01

    Serotypical application of herpes simplex virus (HSV) vectors to gene therapy (type 1) and prophylactic vaccines (types 1 and 2) has garnered substantial clinical interest recently. HSV vectors and amplicons have also been employed as helper virus constructs for manufacture of the dependovirus adeno-associated virus (AAV). Large quantities of infectious HSV stocks are requisite for these therapeutic applications, requiring a scalable vector manufacturing and processing platform comprised of unit operations which accommodate the fragility of HSV. In this study, production of a replication deficient rHSV-1 vector bearing the rep and cap genes of AAV-2 (denoted rHSV-rep2/cap2) was investigated. Adaptation of rHSV production from T225 flasks to a packed bed, fed-batch bioreactor permitted an 1100-fold increment in total vector production without a decrease in specific vector yield (pfu/cell). The fed-batch bioreactor system afforded a rHSV-rep2/cap2 vector recovery of 2.8 x 10(12) pfu. The recovered vector was concentrated by tangential flow filtration (TFF), permitting vector stocks to be formulated at greater than 1.5 x 10(9) pfu/mL.

  15. Inhibition of multiplication of herpes simplex virus by caffeic acid.

    Science.gov (United States)

    Ikeda, Keiko; Tsujimoto, Kazuko; Uozaki, Misao; Nishide, Mitsunori; Suzuki, Yukiko; Koyama, A Hajime; Yamasaki, Hisashi

    2011-10-01

    Hot water extracts of coffee grinds and commercial instant coffee solutions have been shown to exhibit marked antiviral and virucidal activities against herpes simplex virus type 1 (HSV-1). Specifically, it has been shown that caffeine and N-methyl-pyridinium formate inhibit the multiplication of HSV-1 in HEp-2 cells. The present study examined the virological properties and the antiviral activity of caffeic acid against HSV-1. Caffeic acid inhibited the multiplication of HSV-1 in vitro, while chlorogenic acid, a caffeic acid ester with quinic acid, did not. These reagents did not have a direct virucidal effect. The one-step growth curve of HSV-1 showed that the addition of caffeic acid at 8 h post infection (h p.i.) did not significantly affect the formation of progeny viruses. An analysis of the influence of the time of caffeic acid addition, revealed that addition at an early time post infection remarkably inhibited the formation of progeny infectious virus in the infected cells, but its addition after 6 h p.i. (i.e., the time of the completion of viral genome replication) did not efficiently inhibit this process. These results indicate that caffeic acid inhibits HSV-1 multiplication mainly before the completion of viral DNA replication, but not thereafter. Although caffeic acid showed some cytotoxicity by prolonged incubation, the observed antiviral activity is likely not the secondary result of the cytotoxic effect of the reagent, because the inhibition of the virus multiplication was observed before appearance of the notable cytotoxicity.

  16. Ribonucleotides Linked to DNA of Herpes Simplex Virus Type 1

    Science.gov (United States)

    Hirsch, Ivan; Vonka, Vladimír

    1974-01-01

    Cells of a continuous cell line derived from rabbit embryo fibroblasts were infected with herpes simplex type 1 virus (HSV-1) and maintained in the presence of either [5-3H]uridine or [methyl-3H]thymidine or 32PO43−. Nucleocapsids were isolated from the cytoplasmic fraction, partially purified, and treated with DNase and RNase. From the pelleted nucleocapsids, DNA was extracted and purified by centrifugation in sucrose and cesium sulfate gradients. The acid-precipitable radioactivity of [5-3H]uridine-labeled DNA was partially susceptible to pancreatic RNase and alkaline treatment; the susceptibility to the enzyme decreased with increasing salt concentration. No drop of activity of DNA labeled with [3H]thymidine was observed either after RNase or alkali treatment. Base composition analysis of [5-3H]uridine-labeled DNA showed that the radioactivity was recovered as uracil and cytosine. In the cesium sulfate gradient, the purified [5-3H]uridine-labeled DNA banded at the same position as the 32P-labeled DNA. The present data tend to suggest that ribonucleotide sequences are present in HSV DNA, that they are covalently attached to the viral DNA, and that they can form double-stranded structures. PMID:4364894

  17. Feature extraction through least squares fit to a simple model

    International Nuclear Information System (INIS)

    Demuth, H.B.

    1976-01-01

    The Oak Ridge National Laboratory (ORNL) presented the Los Alamos Scientific Laboratory (LASL) with 18 radiographs of fuel rod test bundles. The problem is to estimate the thickness of the gap between some cylindrical rods and a flat wall surface. The edges of the gaps are poorly defined due to finite source size, x-ray scatter, parallax, film grain noise, and other degrading effects. The radiographs were scanned and the scan-line data were averaged to reduce noise and to convert the problem to one dimension. A model of the ideal gap, convolved with an appropriate point-spread function, was fit to the averaged data with a least squares program; and the gap width was determined from the final fitted-model parameters. The least squares routine did converge and the gaps obtained are of reasonable size. The method is remarkably insensitive to noise. This report describes the problem, the techniques used to solve it, and the results and conclusions. Suggestions for future work are also given

  18. SPECT electronic collimation resolution enhancement using chi-square minimization

    International Nuclear Information System (INIS)

    Durkee, J.W. Jr.; Antich, P.P.; Tsyganov, E.N.; Constantinescu, A.; Fernando, J.L.; Kulkarni, P.V.; Smith, B.J.; Arbique, G.M.; Lewis, M.A.; Nguyen, T.; Raheja, A.; Thambi, G.; Parkey, R.W.

    1998-01-01

    An electronic collimation technique is developed which utilizes the chi-square goodness-of-fit measure to filter scattered gammas incident upon a medical imaging detector. In this data mining technique, Compton kinematic expressions are used as the chi-square fitting templates for measured energy-deposition data involving multiple-interaction scatter sequences. Fit optimization is conducted using the Davidon variable metric minimization algorithm to simultaneously determine the best-fit gamma scatter angles and their associated uncertainties, with the uncertainty associated with the first scatter angle corresponding to the angular resolution precision for the source. The methodology requires no knowledge of materials and geometry. This pattern recognition application enhances the ability to select those gammas that will provide the best resolution for input to reconstruction software. Illustrative computational results are presented for a conceptual truncated-ellipsoid polystyrene position-sensitive fibre head-detector Monte Carlo model using a triple Compton scatter gamma sequence assessment for a 99m Tc point source. A filtration rate of 94.3% is obtained, resulting in an estimated sensitivity approximately three orders of magnitude greater than a high-resolution mechanically collimated device. The technique improves the nominal single-scatter angular resolution by up to approximately 24 per cent as compared with the conventional analytic electronic collimation measure. (author)

  19. Laboratory diagnosis and epidemiology of herpes simplex 1 and 2 genital infections.

    Science.gov (United States)

    Glinšek Biškup, Urška; Uršič, Tina; Petrovec, Miroslav

    2015-01-01

    Herpes simplex virus types 1 and 2 are the main cause of genital ulcers worldwide. Although herpes simplex virus type 2 is the major cause of genital lesions, herpes simplex virus type 1 accounts for half of new cases in developed countries. Herpes simplex virus type 2 seroprevalence rises with sexual activity from adolescence through adulthood. Slovenian data in a high-risk population shows 16% seroprevalence of HSV-2. HSV-1 and HSV-2 DNA in genital swabs was detected in 19% and 20.7%, respectively. In most cases, genital herpes is asymptomatic. Primary genital infection with herpes simplex virus types 1 and 2 can be manifested by a severe clinical picture, involving the vesicular skin and mucosal changes and ulcerative lesions of the vulva, vagina, and cervix in women and in the genital region in men. Direct methods of viral genome detection are recommended in the acute stage of primary and recurrent infections when manifest ulcers or lesions are evident. Serological testing is recommended as an aid in diagnosing genital herpes in patients with reinfection in atypical or already healed lesions. When herpes lesions are present, all sexual activities should be avoided to prevent transmission of infection. Antiviral drugs can reduce viral shedding and thus reduce the risk of sexual transmission of the virus.

  20. Two cases of herpes simplex esophagitis during treatment for lung cancer

    International Nuclear Information System (INIS)

    Tajiri, Tomoko; Ikeue, Tatsuyoshi; Sugita, Takakazu; Morita, Kyohei; Maniwa, Ko; Watanabe, Shigeki; Hirokawa, Sadao; Nishiyama, Hideki; Maekawa, Nobuo

    2007-01-01

    Herpes simplex virus (HSV) is one of the three major causes of infectious esophagitis, along with Candida albicans and Cytomegalo virus (CMV). Most cases occur in immunocompromised hosts, in whom this can be life threatening. We report two cases of herpes simplex esophagitis occurring during treatment for lung cancer. An 80-year-old man with radiation pneumonia caused by radiotherapy for lung cancer was admitted for treatment with antibiotics and corticosteroids. Shortly after initiation of treatment, he complained of dysphasia. Endoscopic examination revealed herpes simplex esophagitis. A 71-year-old man was given corticosteroids for cryptogenic organizing pneumonia following chemotherapy for lung cancer. During treatment, the patient complained of odynophagia. Endoscopic examination revealed herpes simplex esophagitis. Both cases died due to progression of lung cancer and acute respiratory distress syndrome, despite administration of acyclovir. When immunocompromised patients complain of prolonged dysphagia and odynophagia, the presence of herpes simplex esophagitis should be clarified by endoscopic examination. It is occasionally difficult to distinguish between HSV and Candida esophagitis by endoscopic observation alone. Esophageal mucosal endoscopic cytology can help differentiate between these three infectious agents. (author)

  1. Dendritic cells in the cornea during Herpes simplex viral infection and inflammation.

    Science.gov (United States)

    Kwon, Min S; Carnt, Nicole A; Truong, Naomi R; Pattamatta, Ushasree; White, Andrew J; Samarawickrama, Chameen; Cunningham, Anthony L

    2017-11-10

    Herpes simplex keratitis is commonly caused by Herpes simplex virus type 1, which primarily infects eyelids, corneas, or conjunctiva. Herpes simplex virus type 1-through sophisticated interactions with dendritic cells (DCs), a type of antigen-presenting cell)-initiates proinflammatory responses in the cornea. Corneas were once thought to be an immune-privileged region; however, with the recent discovery of DCs that reside in the cornea, this long-held conjecture has been overturned. Therefore, evaluating the clinical, preclinical, and cell-based studies that investigate the roles of DCs in corneas infected with Herpes simplex virus is critical. With in vivo confocal microscopy, animal models, and cell culture experiments, we may further the understanding of the sophisticated interactions of Herpes simplex virus with DCs in the cornea and the molecular mechanism associated with it. It has been shown that specific differentiation of DCs using immunohistochemistry, flow cytometry, and polymerase chain reaction analysis in both human and mice tissues and viral tissue infections are integral to increasing understanding. As for in vivo confocal microscopy, it holds promise as it is the least invasive and a real-time investigation. These tools will facilitate the discovery of various targets to develop new treatments. Copyright © 2017 Elsevier Inc. All rights reserved.

  2. Anisakis simplex (Nematoda: Anisakidae from horse mackerel (Trachurus trachurus in Atlantic coast of Morocco

    Directory of Open Access Journals (Sweden)

    Nizar Shawket

    2017-08-01

    Full Text Available Objective: To focus on the description of the Anisakis simplex (A. simplex parasites of Trachurus trachurus (Linnaeus, 1758 from the Atlantic coast of Mehdia (Kenitra, Morocco from December 2014 to November 2015. Methods: A total of 1 012 Trachurus trachurus (Linnaeus, 1758 obtained from commercial fishing were performed autopsy for their parasitic Nematoda. Then 6 695 specimens of A. simplex were collected from their abdominal cavity. These parasites were attached on different organs particularly on ovaries and testes. All parasites were counted, measured and photographed under microscopy. Results: The infection levels of fishes by larval A. simplex are expressed by prevalence (35.28%, mean intensity (18.75 and abundance (6.6. The effect of parasitism did not show a significant negative impact on the condition of the examined fishes. Conclusions: Significant positive correlations were found between host length and A. simplex occurrence, and abundance. The variation observed in the infection levels was discussed within the seasons and climatic change.

  3. Anisakis simplex: from obscure infectious worm to inducer of immune hypersensitivity.

    Science.gov (United States)

    Audicana, M Teresa; Kennedy, Malcolm W

    2008-04-01

    Infection of humans with the nematode worm parasite Anisakis simplex was first described in the 1960s in association with the consumption of raw or undercooked fish. During the 1990s it was realized that even the ingestion of dead worms in food fish can cause severe hypersensitivity reactions, that these may be more prevalent than infection itself, and that this outcome could be associated with food preparations previously considered safe. Not only may allergic symptoms arise from infection by the parasites ("gastroallergic anisakiasis"), but true anaphylactic reactions can also occur following exposure to allergens from dead worms by food-borne, airborne, or skin contact routes. This review discusses A. simplex pathogenesis in humans, covering immune hypersensitivity reactions both in the context of a living infection and in terms of exposure to its allergens by other routes. Over the last 20 years, several studies have concentrated on A. simplex antigen characterization and innate as well as adaptive immune response to this parasite. Molecular characterization of Anisakis allergens and isolation of their encoding cDNAs is now an active field of research that should provide improved diagnostic tools in addition to tools with which to enhance our understanding of pathogenesis and controversial aspects of A. simplex allergy. We also discuss the potential relevance of parasite products such as allergens, proteinases, and proteinase inhibitors and the activation of basophils, eosinophils, and mast cells in the induction of A. simplex-related immune hypersensitivity states induced by exposure to the parasite, dead or alive.

  4. Total least squares for anomalous change detection

    Energy Technology Data Exchange (ETDEWEB)

    Theiler, James P [Los Alamos National Laboratory; Matsekh, Anna M [Los Alamos National Laboratory

    2010-01-01

    A family of difference-based anomalous change detection algorithms is derived from a total least squares (TLSQ) framework. This provides an alternative to the well-known chronochrome algorithm, which is derived from ordinary least squares. In both cases, the most anomalous changes are identified with the pixels that exhibit the largest residuals with respect to the regression of the two images against each other. The family of TLSQ-based anomalous change detectors is shown to be equivalent to the subspace RX formulation for straight anomaly detection, but applied to the stacked space. However, this family is not invariant to linear coordinate transforms. On the other hand, whitened TLSQ is coordinate invariant, and furthermore it is shown to be equivalent to the optimized covariance equalization algorithm. What whitened TLSQ offers, in addition to connecting with a common language the derivations of two of the most popular anomalous change detection algorithms - chronochrome and covariance equalization - is a generalization of these algorithms with the potential for better performance.

  5. Least-squares collocation meshless approach for radiative heat transfer in absorbing and scattering media

    International Nuclear Information System (INIS)

    Liu, L.H.; Tan, J.Y.

    2007-01-01

    A least-squares collocation meshless method is employed for solving the radiative heat transfer in absorbing, emitting and scattering media. The least-squares collocation meshless method for radiative transfer is based on the discrete ordinates equation. A moving least-squares approximation is applied to construct the trial functions. Except for the collocation points which are used to construct the trial functions, a number of auxiliary points are also adopted to form the total residuals of the problem. The least-squares technique is used to obtain the solution of the problem by minimizing the summation of residuals of all collocation and auxiliary points. Three numerical examples are studied to illustrate the performance of this new solution method. The numerical results are compared with the other benchmark approximate solutions. By comparison, the results show that the least-squares collocation meshless method is efficient, accurate and stable, and can be used for solving the radiative heat transfer in absorbing, emitting and scattering media

  6. Geographic variation in thermal traits in Digenea simplex and Champia parvula (Rhodophyta) in relation to present and glacial temperature regimes

    NARCIS (Netherlands)

    Orfanidis, S; Breeman, AM

    1999-01-01

    Geographic variation in temperature responses (survival and growth) was investigated in two red algae: Digenea simplex (Wulfen) C. Agardh and Champia parvula (C. Agardh) Harvey. D. simplex has a tropical to warm temperate distribution; C. parvula extends from the tropics into the cold temperate

  7. Whole Blood Polymerase Chain Reaction in a Neonate with Disseminated Herpes Simplex Virus Infection and Liver Failure

    Directory of Open Access Journals (Sweden)

    Jennifer A. Scoble

    2013-10-01

    Full Text Available A late preterm neonate born by cesarean section with intact membranes presented at 9 days of life with shock and liver failure. Surface cultures were negative but whole blood polymerase chain reaction was positive for herpes simplex virus type 2, underscoring the value of this test in early diagnosis of perinatally acquired disseminated herpes simplex virus infection without skin lesions.

  8. Measured and predicted root-mean-square errors in square and triangular antenna mesh facets

    Science.gov (United States)

    Fichter, W. B.

    1989-01-01

    Deflection shapes of square and equilateral triangular facets of two tricot-knit, gold plated molybdenum wire mesh antenna materials were measured and compared, on the basis of root mean square (rms) differences, with deflection shapes predicted by linear membrane theory, for several cases of biaxial mesh tension. The two mesh materials contained approximately 10 and 16 holes per linear inch, measured diagonally with respect to the course and wale directions. The deflection measurement system employed a non-contact eddy current proximity probe and an electromagnetic distance sensing probe in conjunction with a precision optical level. Despite experimental uncertainties, rms differences between measured and predicted deflection shapes suggest the following conclusions: that replacing flat antenna facets with facets conforming to parabolically curved structural members yields smaller rms surface error; that potential accuracy gains are greater for equilateral triangular facets than for square facets; and that linear membrane theory can be a useful tool in the design of tricot knit wire mesh antennas.

  9. Simplified neural networks for solving linear least squares and total least squares problems in real time.

    Science.gov (United States)

    Cichocki, A; Unbehauen, R

    1994-01-01

    In this paper a new class of simplified low-cost analog artificial neural networks with on chip adaptive learning algorithms are proposed for solving linear systems of algebraic equations in real time. The proposed learning algorithms for linear least squares (LS), total least squares (TLS) and data least squares (DLS) problems can be considered as modifications and extensions of well known algorithms: the row-action projection-Kaczmarz algorithm and/or the LMS (Adaline) Widrow-Hoff algorithms. The algorithms can be applied to any problem which can be formulated as a linear regression problem. The correctness and high performance of the proposed neural networks are illustrated by extensive computer simulation results.

  10. Efficient QR sequential least square algorithm for high frequency GNSS precise point positioning seismic application

    Science.gov (United States)

    Barbu, Alina L.; Laurent-Varin, Julien; Perosanz, Felix; Mercier, Flavien; Marty, Jean-Charles

    2018-01-01

    The implementation into the GINS CNES geodetic software of a more efficient filter was needed to satisfy the users who wanted to compute high-rate GNSS PPP solutions. We selected the SRI approach and a QR factorization technique including an innovative algorithm which optimizes the matrix reduction step. A full description of this algorithm is given for future users. The new capacities of the software have been tested using a set of 1 Hz data from the Japanese GEONET network including the Mw 9.0 2011 Tohoku earthquake. Station coordinates solution agreed at a sub-decimeter level with previous publications as well as with solutions we computed with the National Resource Canada software. An additional benefit from the implementation of the SRI filter is the capability to estimate high-rate tropospheric parameters too. As the CPU time to estimate a 1 Hz kinematic solution from 1 h of data is now less than 1 min we could produced series of coordinates for the full 1300 stations of the Japanese network. The corresponding movie shows the impressive co-seismic deformation as well as the wave propagation along the island. The processing was straightforward using a cluster of PCs which illustrates the new potentiality of the GINS software for massive network high rate PPP processing.

  11. Computation of the Percentage Points of the Chi-Square Distribution

    Science.gov (United States)

    1977-04-01

    344 1 10 NL N 1~0 (r, P) 1N’ N ") A ATUN 4q T I-)N a .9W" 0 (A s tf% o 1 .4 .4 ifN #Im W ý 4 00UN JU’N N JN 3 1 MIn10 %3 it 0 1) P-N N NI N0 7 C ) k...Avenue Kirtland Air Force Base Silver Spring, Maryland 20910 Albuquerque. Newv Mexico 87117 Attn: Strategic Analysis Support Group Document Librarian...Los Alamios Scientific Liboratory P.O. Box 1663 Prof. George F. Carrier Los Alamios, New Mexico 87544 Pierce Hall, Room 311 Attn: Report Library

  12. A molecular method for typing Herpes simplex virus isolates as an alternative to immunofluorescence methods

    Directory of Open Access Journals (Sweden)

    Abraham A

    2009-01-01

    Full Text Available Background: Typing of Herpes simplex virus (HSV isolates is required to identify the virus isolated in culture. The methods available for this include antigen detection by immunofluorescence (IF assays and polymerase chain reaction (PCR. This study was undertaken to standardize a molecular method for typing of HSV and compare it with a commercial IF reagent for typing. Objectives: To compare a molecular method for typing HSV isolates with a monoclonal antibody (MAb based IF test. Study design : This cross-sectional study utilized four reference strains and 42 HSV isolates obtained from patients between September 1998 and September 2004. These were subjected to testing using an MAb-based IF test and a PCR that detects the polymerase ( pol gene of HSV isolates. Results: The observed agreement of the MAb IF assay with the pol PCR was 95.7%. Fifty four point eight percent (23/42 of isolates tested by IF typing were found to be HSV-1, 40.5% (17/42 were HSV-2, and two (4.8% were untypable using the MAb IF assay. The two untypable isolates were found to be HSV-2 using the pol PCR. In addition, the cost per PCR test for typing is estimated to be around Rs 1,300 (USD 30, whereas the cost per MAb IF test is about Rs 1,500 (USD 35 including all overheads (reagents, instruments, personnel time, and consumables. Conclusion: The pol PCR is a cheaper and more easily reproducible method for typing HSV isolates as compared to the IF test. It could replace the IF-based method for routine typing of HSV isolates as availability of PCR machines (thermal cyclers is now more widespread than fluorescence microscopes in a country like India.

  13. Inhibition of herpes simplex virus type 1 entry by chloride channel inhibitors tamoxifen and NPPB

    Energy Technology Data Exchange (ETDEWEB)

    Zheng, Kai [Guangzhou Jinan Biomedicine Research and Development Center, National Engineering Research Center of Genetic Medicine, Jinan University, Guangzhou (China); College of Life Science and Technology, Jinan University, Guangzhou (China); Chen, Maoyun [Guangzhou Jinan Biomedicine Research and Development Center, National Engineering Research Center of Genetic Medicine, Jinan University, Guangzhou (China); College of pharmacy, Jinan University, Guangzhou (China); Xiang, Yangfei; Ma, Kaiqi [Guangzhou Jinan Biomedicine Research and Development Center, National Engineering Research Center of Genetic Medicine, Jinan University, Guangzhou (China); Jin, Fujun [Guangzhou Jinan Biomedicine Research and Development Center, National Engineering Research Center of Genetic Medicine, Jinan University, Guangzhou (China); College of pharmacy, Jinan University, Guangzhou (China); Wang, Xiao [School of Pharmaceutical Sciences, Sun Yat-sen University, Guangzhou 510006 (China); Wang, Xiaoyan; Wang, Shaoxiang [Guangzhou Jinan Biomedicine Research and Development Center, National Engineering Research Center of Genetic Medicine, Jinan University, Guangzhou (China); Wang, Yifei, E-mail: twang-yf@163.com [Guangzhou Jinan Biomedicine Research and Development Center, National Engineering Research Center of Genetic Medicine, Jinan University, Guangzhou (China)

    2014-04-18

    Highlights: • We analyze the anti-HSV potential of chloride channel inhibitors. • Tamoxifen and NPPB show anti-HSV-1 and anti-ACV-resistant HSV-1 activities. • HSV-1 infection induces intracellular chloride concentration increasing. • Tamoxifen and NPPB inhibit HSV-1 early infection. • Tamoxifen and NPPB prevent the fusion process of HSV-1. - Abstract: Herpes simplex virus type 1 (HSV-1) infection is very common worldwide and can cause significant health problems from periodic skin and corneal lesions to encephalitis. Appearance of drug-resistant viruses in clinical therapy has made exploring novel antiviral agents emergent. Here we show that chloride channel inhibitors, including tamoxifen and 5-nitro-2-(3-phenyl-propylamino) benzoic acid (NPPB), exhibited extensive antiviral activities toward HSV-1 and ACV-resistant HSV viruses. HSV-1 infection induced chloride ion influx while treatment with inhibitors reduced the increase of intracellular chloride ion concentration. Pretreatment or treatment of inhibitors at different time points during HSV-1 infection all suppressed viral RNA synthesis, protein expression and virus production. More detailed studies demonstrated that tamoxifen and NPPB acted as potent inhibitors of HSV-1 early entry step by preventing viral binding, penetration and nuclear translocation. Specifically the compounds appeared to affect viral fusion process by inhibiting virus binding to lipid rafts and interrupting calcium homeostasis. Taken together, the observation that tamoxifen and NPPB can block viral entry suggests a stronger potential for these compounds as well as other ion channel inhibitors in antiviral therapy against HSV-1, especially the compound tamoxifen is an immediately actionable drug that can be reused for treatment of HSV-1 infections.

  14. A remarkable autosomal heteromorphism in Pseudoryzomys simplex 2n = 56; FN = 54-55 (Rodentia, Sigmodontinae

    Directory of Open Access Journals (Sweden)

    Camila Nascimento Moreira

    2013-01-01

    Full Text Available Pseudoryzomys simplex, the false rice rat, is a monotypic genus of the Oryzomyini tribe (Sigmodontinae distributed in part of Bolivia, Paraguay, Argentina and Brazil. Its diploid number has been described as 56 acrocentric chromosomes decreasing in size and no karyotype figure has been depicted. Herein, we present karyotypic data on P. simplex, including chromosome banding and molecular fluorescent in situ hybridization using telomeric sequences and the whole X-chromosome of its sister clade Holochilus brasiliensis (HBR as probes. A case of remarkable autosomal heteromorphism due to the presence of a whole heterochromatic arm leading to the variability of FN is reported, as well as the occurrence of regions of homology between the X and Y chromosomes (pseudoautosomal regions after chromosome painting with the HBR X probe on P. simplex metaphases.

  15. Quantitative characterization of the reliability of simplex buses and stars to compare their benefits in fieldbuses

    International Nuclear Information System (INIS)

    Barranco, Manuel; Proenza, Julián; Almeida, Luís

    2015-01-01

    Fieldbuses targeted to highly dependable distributed embedded systems are shifting from bus to star topologies. Surprisingly, despite the efforts into this direction, engineers lack of analyses that quantitatively characterize the system reliability achievable by buses and stars. Thus, to guide engineers in developing adequate bus and star fieldbuses, this work models, quantifies and compares the system reliability provided by simplex buses and stars for the case of the Controller Area Network (CAN). It clarifies how relevant dependability-related aspects affect reliability, refuting some intuitive ideas, and revealing some previously unknown bus and star benefits. - Highlights: • SANs models that quantify the reliability of simplex buses/stars in fieldbuses. • Models cover system relevant dependability-related features abstracted in the literature. • Results refute intuitive ideas about buses and stars and show some unexpected effects. • Models and results can guide the design of reliable simplex bus/stars fieldbuses

  16. Latency of Herpes Simplex Virus in Absence of Neutralizing Antibody: Model for Reactivation

    Science.gov (United States)

    Sekizawa, Tsuyoshi; Openshaw, Harry; Wohlenberg, Charles; Notkins, Abner Louis

    1980-11-01

    Mice inoculated with herpes simplex virus (type 1) by the lip or corneal route and then passively immunized with rabbit antibody to herpes simplex virus developed a latent infection in the trigeminal ganglia within 96 hours. Neutralizing antibody to herpes simplex virus was cleared from the circulation and could not be detected in most of these mice after 2 months. Examination of ganglia from the antibody-negative mice revealed latent virus in over 90 percent of the animals, indicating that serum neutralizing antibody is not necessary to maintain the latent state. When the lips or corneas of these mice were traumatized, viral reactivation occurred in up to 90 percent of the mice, as demonstrated by the appearance of neutralizing antibody. This study provides a model for identifying factors that trigger viral reactivation.

  17. Tensor Renormalization of Quantum Many-Body Systems Using Projected Entangled Simplex States

    Directory of Open Access Journals (Sweden)

    Z. Y. Xie

    2014-02-01

    Full Text Available We propose a new class of tensor-network states, which we name projected entangled simplex states (PESS, for studying the ground-state properties of quantum lattice models. These states extend the pair-correlation basis of projected entangled pair states to a simplex. PESS are exact representations of the simplex solid states, and they provide an efficient trial wave function that satisfies the area law of entanglement entropy. We introduce a simple update method for evaluating the PESS wave function based on imaginary-time evolution and the higher-order singular-value decomposition of tensors. By applying this method to the spin-1/2 antiferromagnetic Heisenberg model on the kagome lattice, we obtain accurate and systematic results for the ground-state energy, which approach the lowest upper bounds yet estimated for this quantity.

  18. Fostering acceptance of human papillomavirus and herpes simplex virus vaccines among adolescents and parents.

    Science.gov (United States)

    Short, Mary B; Rosenthal, Susan L

    2006-02-01

    Vaccines for human papillomavirus and herpes simplex virus are currently in development, and these vaccines could be an effective and cost-effective strategy to control these diseases. Young adolescents are likely to be the target recipients of these vaccines. These vaccines, however, will only be successful in reducing the prevalence of these diseases if accepted. This manuscript will focus on the issues associated with the acceptability of these vaccines by healthcare providers, parents, and adolescents/young adults. Recent studies with healthcare providers, parents, and adolescent/young adults have found support for the acceptability of the human papillomavirus and herpes simplex virus vaccines. Protecting adolescents from serious diseases may be a more important priority for parents than concern about how the disease is transmitted. It is likely that vaccines for human papillomavirus and herpes simplex virus will find acceptance among these groups. Strategies to increase acceptability and foster access, however, will still be needed.

  19. Square well approximation to the optical potential

    International Nuclear Information System (INIS)

    Jain, A.K.; Gupta, M.C.; Marwadi, P.R.

    1976-01-01

    Approximations for obtaining T-matrix elements for a sum of several potentials in terms of T-matrices for individual potentials are studied. Based on model calculations for S-wave for a sum of two separable non-local potentials of Yukawa type form factors and a sum of two delta function potentials, it is shown that the T-matrix for a sum of several potentials can be approximated satisfactorily over all the energy regions by the sum of T-matrices for individual potentials. Based on this, an approximate method for finding T-matrix for any local potential by approximating it by a sum of suitable number of square wells is presented. This provides an interesting way to calculate the T-matrix for any arbitary potential in terms of Bessel functions to a good degree of accuracy. The method is applied to the Saxon-Wood potentials and good agreement with exact results is found. (author)

  20. Vehicle detection using partial least squares.

    Science.gov (United States)

    Kembhavi, Aniruddha; Harwood, David; Davis, Larry S

    2011-06-01

    Detecting vehicles in aerial images has a wide range of applications, from urban planning to visual surveillance. We describe a vehicle detector that improves upon previous approaches by incorporating a very large and rich set of image descriptors. A new feature set called Color Probability Maps is used to capture the color statistics of vehicles and their surroundings, along with the Histograms of Oriented Gradients feature and a simple yet powerful image descriptor that captures the structural characteristics of objects named Pairs of Pixels. The combination of these features leads to an extremely high-dimensional feature set (approximately 70,000 elements). Partial Least Squares is first used to project the data onto a much lower dimensional sub-space. Then, a powerful feature selection analysis is employed to improve the performance while vastly reducing the number of features that must be calculated. We compare our system to previous approaches on two challenging data sets and show superior performance.

  1. The Square Kilometre Array: An Engineering Perspective

    CERN Document Server

    Hall, Peter J

    2005-01-01

    This volume is an up-to-date and comprehensive overview of the engineering of the Square Kilometre Array (SKA), a revolutionary instrument which will be the world’s largest radio telescope. Expected to be completed by 2020, the SKA will be a pre-eminent tool in probing the Early Universe and in enhancing greatly the discovery potential of radio astronomy in many other fields. This book, containing 36 refereed papers written by leaders in SKA engineering, has been compiled by the International SKA Project Office and is the only contemporary compendium available. It features papers dealing with pivotal technologies such as antennas, RF systems and data transport. As well, overviews of important SKA demonstrator instruments and key system design issues are included. Practising professionals, and students interested in next-generation telescopes, will find this book an invaluable reference.

  2. Magnetic anisotropy engineering in square magnetic elements

    International Nuclear Information System (INIS)

    Di Bona, A.; Contri, S.F.; Gazzadi, G.C.; Valeri, S.; Vavassori, P.

    2007-01-01

    Square magnetic elements with side in the 100-500 nm range have been fabricated using the focused ion beam (FIB) milling technique from a 10 nm thick, single-crystal Fe film, epitaxially grown on MgO(0 0 1). Thanks to the good crystal quality of the film, magnetic elements with well-defined magnetocrystalline anisotropy have been prepared, while the fine control of the size and shape of the magnets allows for the effective engineering of the anisotropic behavior of the magnetostatic energy that determines the so-called configurational anisotropy. Micromagnetic calculations and experiments show that the angular dependence of the transverse susceptibility has a strong dependence on the material parameters as well as on the static applied field. This allows the effective engineering of the total anisotropy of the magnets

  3. Astroparticle physics with the square kilometer array

    Energy Technology Data Exchange (ETDEWEB)

    James, Clancy W. [Univ. Erlangen-Nuernberg (Germany); Alvarez-Muniz, Jaime [Univ. de Santiago de Compostela (Spain); Bray, Justin D. [Univ. of Southampton (United Kingdom); Buitink, Stijn; Veen, Sander ter [Radboud Univ. Nijmegen (Netherlands); Dagkesamanskii, Rustam D. [Lebedev Physical Institute (Russian Federation); Dallier, Richard; Martin, Lilian [SUBATECH, Nantes (France); Station de radioastronomie de Nancay (France); Ekers, Ron D. [CSIRO ATNF, Epping (Australia); Falcke, Heino [Radboud Univ. Nijmegen (Netherlands); ASTRON, Dwingeloo (Netherlands); Gayley, Ken G.; Mutel, Robert L. [Univ. of Iowa (United States); Heuge, Tim; Schroeder, Frank [KIT, Karlsruhe (Germany); Mevius, Maaijke; Scholten, Olaf [Univ. of Groningen (Netherlands); Protheroe, Raymond J. [Univ. of Adelaide (Australia); Revenu, Benoit [SUBATECH, Nantes (France); Spencer, Ralph E. [Univ. of Manchester (United Kingdom)

    2015-07-01

    The Square Kilometre Array (SKA) will be a giant array of radio telescopes to be built in Australia and Southern Africa over the next ten years. This talk outlines two projects which aim to use this radio-astronomical instrument to detect high-energy cosmic rays interacting in the Earth's atmosphere, and on the Moon. Equipped with transient buffers to capture the nanosecond-duration radio pulses produced by these particle interactions, the SKA will be able to study air shower physics with high-precision near-field interferometry, the cosmic-ray composition near the knee, and perform directional studies in the highest-energy regime, above 10{sup 19} eV.

  4. Bubble properties of heterogeneous bubbly flow in a square bubble column

    NARCIS (Netherlands)

    Bai, Wei; Deen, Niels G.; Kuipers, J.A.M.

    2010-01-01

    The present work focuses on the measurements of bubble properties in heterogeneous bubbly flows in a square bubble column. A four-point optical fibre probe was used for this purpose. The accuracy and intrusive effect of the optical probe was investigated first. The results show that the optical

  5. Piroxicam inhibits herpes simplex virus type 1 infection in vitro.

    Science.gov (United States)

    Astani, A; Albrecht, U; Schnitzler, P

    2015-05-01

    Piroxicam is a potent, nonsteroidal, anti-inflammatory agent (NSAID) which also exhibits antipyretic activity. The antiviral effect of piroxicam against herpes simplex virus type 1 (HSV-1) was examined in vitro on RC-37 monkey kidney cells using a plaque reduction assay. Piroxicam was dissolved in ethanol or dimethylsulfoxide (DMSO) and the 50% inhibitory concentration (IC50) was determined at 4 μg/ml and 75 μg/ml, respectively. The IC50 for the standard antiherpetic drug acyclovir was determined at 1.6 μM. At non-cytotoxic concentrations of these piroxicam solutions, plaque formation was significantly reduced by 62.4% for ethanolic piroxicam and 72.8% for piroxicam in DMSO. The mode of antiviral action of these drugs was assessed by time-on-addition assays. No antiviral effect was observed when cells were incubated with piroxicam prior to infection with HSV-1 or when HSV-1 infected cells were treated with dissolved piroxicam. Herpesvirus infection was, however, significantly inhibited when HSV-1 was incubated with piroxicam prior to the infection of cells. These results indicate that piroxicam affected the virus before adsorption, but not after penetration into the host cell, suggesting that piroxicam exerts a direct antiviral effect on HSV-1. Free herpesvirus was sensitive to piroxicam in a concentration-dependent manner and the inhibition of HSV-1 appears to occur before entering the cell but not after penetration of the virus into the cell. Considering the lipophilic nature of piroxicam, which enables it to penetrate the skin, it might be suitable for topical treatment of herpetic infections.

  6. Pneumomediastinum and Pneumothorax Associated with Herpes Simplex Virus (HSV) Pneumonia

    Science.gov (United States)

    Rivera, Xavier Colón; González Monroig, Hernán A.; Puebla, Juan Garcia

    2018-01-01

    Patient: Male, 37 Final Diagnosis: HSV pneumonia Symptoms: Cough • fever • sob Medication: — Clinical Procedure: — Specialty: Infectious Diseases Objective: Unusual clinical course Background: Pneumonia is one of the most common causes of death from infectious disease in the United States (US). Although most cases of community-acquired pneumonia (CAP) are secondary to bacterial infection, up to one-third of cases are secondary to viral infection, most commonly due to rhinovirus and influenza virus. Pneumonia due to herpes simplex virus (HSV) is rare, and there is limited knowledge of the pathogenesis and clinical complications. This report is of a fatal case of HSV pneumonia associated with bilateral pneumothorax and pneumomediastinum. Case Report: A 36-year-old homeless male Hispanic patient, who was a chronic smoker, with a history of intravenous drug abuse and a medical history of chronic hepatitis C virus (HCV) and human immunodeficiency virus (HIV) infection, not on highly active antiretroviral therapy (HAART), was admitted to hospital as an emergency with a seven-day history of productive purulent cough. The patient was admitted to the medical intensive care unit (MICU) with a diagnosis of CAP, with intubation and mechanical ventilation. Broncho-alveolar lavage (BAL) was performed and was positive for HSV. The patient developed bilateral pneumothorax with pneumomediastinum, which was fatal, despite aggressive clinical management. Conclusions: Pneumonia due to HSV infection is uncommon but has a high mortality. Although HSV pneumonia has been described in immunocompromised patients, further studies are required to determine the pathogenesis, early detection, identification of patients who are at risk and to determine the most effective approaches to prophylaxis and treatment for HSV pneumonia. PMID:29379004

  7. Necrotizing Keratitis Caused by Acyclovir-Resistant Herpes Simplex Virus

    Directory of Open Access Journals (Sweden)

    Koji Toriyama

    2014-10-01

    Full Text Available Background: We report a case of necrotizing keratitis caused by acyclovir (ACV-resistant herpes simplex virus (HSV with a clinical appearance similar to a previous fungal keratitis infection. Methods: Observational case report. Results: Penetrating keratoplasty was performed in the left eye with a history of herpetic keratitis that resolved with periodic treatment with ACV ointment and a topical steroid. The left eye was painful and red with an abscess and corneal erosion in the peripheral donor cornea. Examination of the scraped corneal epithelium by light microscopy and culturing identified Candida albicans; polymerase chain reaction (PCR was negative for human herpes viruses. After antifungal treatment, the ocular pain gradually decreased and the lesions slowly improved but recurred with a similar clinical appearance. A second light microscopy examination and cultures were negative for pathogens including C. albicans. PCR was positive for HSV-1 DNA; treatment with 3% topical ACV ointment was unsuccessful. A third examination showed only HSV-1 DNA. Despite antiviral ACV ointment, no clinical improvement occurred based on the HSV DNA copy numbers, which were the same before and after treatment, indicating a possible ACV-resistant strain. When topical trifluorothymidine was substituted for ACV, clinical improvement occurred and the HSV DNA copy numbers decreased. Conclusion: Necrotizing keratitis induced by ACV-resistant HSV occurred independently after fungal keratitis, with a similar clinical appearance in this case, making diagnosis and treatment difficult. Monitoring the HSV DNA load by real-time PCR could be useful for refractory cases even with atypical clinical appearances.

  8. Imaging findings of neonatal herpes simplex virus type 2 encephalitis

    Energy Technology Data Exchange (ETDEWEB)

    Vossough, Arastoo; Zimmerman, Robert A.; Bilaniuk, Larissa T.; Schwartz, Erin M. [University of Pennsylvania, Children' s Hospital of Philadelphia, Philadelphia, PA (United States)

    2008-04-15

    The CT, MR, and diffusion-weighted initial and follow-up imaging findings in neonatal herpes simplex virus type 2 (HSV-2) encephalitis were assessed. The clinical, laboratory and imaging findings in 12 patients (eight girls and four boys) with proven neonatal HSV-2 encephalitis with follow-up were retrospectively reviewed. Patterns of brain involvement and distribution of lesions were studied and the contribution of diffusion-weighted imaging to the imaging diagnosis of this disease was explored. A total of 24 CT and 22 MRI studies were performed with a mean follow-up time of 38 months. Neonatal HSV-2 encephalitis can be multifocal or limited to only the temporal lobes, brainstem, or cerebellum. The deep gray matter structures were involved in 57% of patients, and hemorrhage was seen in more than half of the patients. CT images were normal or showed mild abnormalities in the early stages of the disease. Conventional MR images may be normal in the early stages of the disease. Lesions were initially seen only by diffusion-weighted imaging in 20% of the patients and this modality showed a substantially more extensive disease distribution in an additional 50% of patients. In 40% of patients, watershed distribution ischemic changes were observed in addition to areas of presumed direct herpetic necrosis. Neonatal HSV-2 encephalitis has a variable imaging appearance. Diffusion-weighted MRI is an important adjunct in the imaging evaluation of this disease. Watershed distribution ischemia in areas remote from the primary herpetic lesions may be seen. (orig.)

  9. Autoimmune post-herpes simplex encephalitis of adults and teenagers.

    Science.gov (United States)

    Armangue, Thaís; Moris, Germán; Cantarín-Extremera, Verónica; Conde, Carlos Enrique; Rostasy, Kevin; Erro, Maria Elena; Portilla-Cuenca, Juan Carlos; Turón-Viñas, Eulàlia; Málaga, Ignacio; Muñoz-Cabello, Beatriz; Torres-Torres, Carmen; Llufriu, Sara; González-Gutiérrez-Solana, Luis; González, Guillermo; Casado-Naranjo, Ignacio; Rosenfeld, Myrna; Graus, Francesc; Dalmau, Josep

    2015-11-17

    To report 14 patients with immune-mediated relapsing symptoms post-herpes simplex encephalitis (HSE) and to compare the clinical and immunologic features of the teenage and adult group with those of young children. Prospective observational study of patients diagnosed between June 2013 and February 2015. Immunologic techniques have been reported previously. Among the teenage and adult group (8 patients, median age 40 years, range 13-69; 5 male), 3 had an acute symptom presentation suggesting a viral relapse, and 5 a presentation contiguous with HSE suggesting a recrudescence of previous deficits. Seven patients developed severe psychiatric/behavioral symptoms disrupting all social interactions, and one refractory status epilepticus. Blepharospasm occurred in one patient. Five patients had CSF antibodies against NMDA receptor (NMDAR) and 3 against unknown neuronal cell surface proteins. In 5/6 patients, the brain MRI showed new areas of contrast enhancement that decreased after immunotherapy and clinical improvement. Immunotherapy was useful in 7/7 patients, sometimes with impressive recoveries, returning to their baseline HSE residual deficits. Compared with the 6 younger children (median age 13 months, range 6-20, all with NMDAR antibodies), the teenagers and adults were less likely to develop choreoathetosis (0/8 vs 6/6, p < 0.01) and decreased level of consciousness (2/8 vs 6/6, p < 0.01) and had longer delays in diagnosis and treatment (interval relapse/antibody testing 85 days, range 17-296, vs 4 days, range 0-33, p = 0.037). In teenagers and adults, the immune-mediated relapsing syndrome post-HSE is different from that known in young children as choreoathetosis post-HSE and is underrecognized. Prompt diagnosis is important because immunotherapy can be highly effective. © 2015 American Academy of Neurology.

  10. A fatal case of herpes simplex virus hepatitis in a pregnant patient.

    Science.gov (United States)

    Masadeh, Maen; Shen, Huafeng; Lee, Yejin; Gunderson, Alan; Brown, Kyle; Bellizzi, Andrew; Tanaka, Tomohiro

    2017-05-01

    We present a middle aged pregnant woman who developed signs and symptoms of acute liver failure and was found to have herpes simplex virus hepatitis. Patient had an emergent delivery and was started on antiviral therapy, but unfortunately due to the severity of her liver failure, she passed away. The importance of reporting this case is to emphasize on the importance of considering herpes simplex infection in pregnant women who present with acute liver failure, and the importance of early administration of antiviral therapy.

  11. First record of Pseudoryzomys simplex (Cricetidae, Sigmodontinae) in a flooded area of the Pantanal, Brazil.

    Science.gov (United States)

    Wolf, R W; Rossi, R V; Aragona, M; Aguiar, D M

    2016-01-01

    Pseudoryzomys simplex is a small to medium sized terrestrial rodent confined to lowland open areas with strong seasonal rainfall throughout the Chaco, Cerrado and Caatinga. Despite its extensive range, the species is difficult to trap. In this report we provide the first record of P. simplex in the Pantanal, where three specimens were collected in a pasture of exotic grass. The specimens are morpometrically similar to the population from Paraguay (Chaco). In this sense, our report shows how interesting a taxonomic review of the species would be to better understand the real significance of the geographic variation herein observed.

  12. Herpes simplex encephalitis: MRI findings in two cases confirmed by polymerase chain reaction assay

    International Nuclear Information System (INIS)

    Lee, J.W.; Kim, I.O.; Kim, W.S.; Yeon, K.M.; Lee, H.-J.; Hwang, Y.S.

    2001-01-01

    Herpes simplex virus (HSV) type I causes a fulminant necrotising meningoencephalitis distinguished from other encephalitides by its focal and often haemorrhagic nature. Specific antiviral therapy with acyclovir can significantly improve the prognosis. We present MRI findings of two cases of herpes simplex encephalitis (HSE) confirmed by PCR analysis, focusing on the serial changes after acyclovir therapy: gyral swelling, high signal intensity on T2-weighted images in the subfrontal region, temporal lobe and insula in the initial stage, then regional extension with enhancement and haemorrhage despite appropriate acyclovir therapy, and finally encephalomalacia and brain atrophy. (orig.)

  13. A Case of Fetal Herpes Simplex Encephalitis Diagnosed Prenatally by Ultrasonography in the Third Trimester

    International Nuclear Information System (INIS)

    Lee, Mi Bum; Kim, Yu Ri; Hwang, Han Sung; Park, Yong Won; Kim, Young Han

    2007-01-01

    Almost all reported incidences of herpes simplex virus (HSV) infection in newborns result as a complication of rupture of the amniotic membranes or the delivery of the baby, but infection via the placenta and amniotic membranes is rare. Ventriculomegaly was detected at 36 weeks of gestation by prenatal ultrasonography, and an emergency cesarean section was then performed at 36 weeks of gestation. We report a case of herpes simplex encephalitis detected at 36 weeks of gestation by prenatal ultrasonography, which was confirmed by a postnatal serologic test and CSF test with a brief review of literature

  14. A Case of Fetal Herpes Simplex Encephalitis Diagnosed Prenatally by Ultrasonography in the Third Trimester

    Energy Technology Data Exchange (ETDEWEB)

    Lee, Mi Bum; Kim, Yu Ri; Hwang, Han Sung; Park, Yong Won; Kim, Young Han [Yonsei University College of Medicine, Seoul (Korea, Republic of)

    2007-12-15

    Almost all reported incidences of herpes simplex virus (HSV) infection in newborns result as a complication of rupture of the amniotic membranes or the delivery of the baby, but infection via the placenta and amniotic membranes is rare. Ventriculomegaly was detected at 36 weeks of gestation by prenatal ultrasonography, and an emergency cesarean section was then performed at 36 weeks of gestation. We report a case of herpes simplex encephalitis detected at 36 weeks of gestation by prenatal ultrasonography, which was confirmed by a postnatal serologic test and CSF test with a brief review of literature

  15. First record of Pseudoryzomys simplex (Cricetidae, Sigmodontinae in a flooded area of the Pantanal, Brazil

    Directory of Open Access Journals (Sweden)

    R. W. Wolf

    Full Text Available Abstract Pseudoryzomys simplex is a small to medium sized terrestrial rodent confined to lowland open areas with strong seasonal rainfall throughout the Chaco, Cerrado and Caatinga. Despite its extensive range, the species is difficult to trap. In this report we provide the first record of P. simplex in the Pantanal, where three specimens were collected in a pasture of exotic grass. The specimens are morpometrically similar to the population from Paraguay (Chaco. In this sense, our report shows how interesting a taxonomic review of the species would be to better understand the real significance of the geographic variation herein observed.

  16. On Numerical Characteristics of а Simplex and their Estimates

    Directory of Open Access Journals (Sweden)

    M. V. Nevskii

    2016-01-01

    Full Text Available Let \\(n\\in {\\mathbb N}\\, and let \\(Q_n=[0,1]^n\\ be the \\(n\\-dimensionalunit cube. For a nondegenerate simplex \\(S\\subset {\\mathbb R}^n\\, by\\(\\sigma S\\ we denote the homothetic image of \\(S\\with the center of homothety in the center of gravity of S and theratio of homothety \\(\\sigma\\. We apply the followingnumerical characteristics of the simplex.Denote by \\(\\xi(S\\ the minimal \\(\\sigma>0\\ with the property\\(Q_n\\subset \\sigma S\\. By \\(\\alpha(S\\ we denote the minimal\\(\\sigma>0\\ such that \\(Q_n\\ is contained in a translateof a simplex \\(\\sigma S\\.By \\(d_i(S\\ we mean the \\(i\\th axial diameter of \\(S\\, i.\\,e.the maximum length of a segment contained in \\(S\\ and parallelto the \\(i\\th coordinate axis. We apply the computationalformulae for\\(\\xi(S\\, \\(\\alpha(S\\, \\(d_i(S\\ which have been proved by the firstauthor. In the paper we discuss the case \\(S\\subset Q_n\\.Let\\(\\xi_n=\\min\\{ \\xi(S: S\\subset Q_n\\}. \\Earlier the first author formulated the conjecture:{\\it if\\(\\xi(S=\\xi_n\\, then \\(\\alpha(S=\\xi(S\\.} He proved this statementfor \\(n=2\\ and the case when \\(n+1\\ is an Hadamard number, i.\\,e.there exists an Hadamard matrix of order \\(n+1\\. The followingconjecture is a strongerproposition: {\\it for each \\(n\\,there exist \\(\\gamma\\geq 1\\, not depending on \\(S\\subset Q_n\\, such that\\(\\xi(S-\\alpha(S\\leq \\gamma (\\xi(S-\\xi_n.\\}By \\(\\varkappa_n\\ we denote the minimal\\(\\gamma\\ with such a property.If \\(n+1\\ is an Hadamard number, then the precise value of \\(\\varkappa_n\\is 1. The existence of \\(\\varkappa_n\\ for other \\(n\\was unclear. In this paper with the use of computer methods we obtainan equality$$\\varkappa_2 = \\frac{5+2\\sqrt{5}}{3}=3.1573\\ldots $$Also we prove a new estimate$$\\xi_4\\leq \\frac{19+5\\sqrt{13}}{9}=4.1141\\ldots,$$which improves the earlier result \\(\\xi_4\\leq \\frac{13}{3}=4.33\\ldots\\Our conjecture is that \\(\\xi_4\\ is

  17. A Simple Parameterization of 3 x 3 Magic Squares

    Science.gov (United States)

    Trenkler, Gotz; Schmidt, Karsten; Trenkler, Dietrich

    2012-01-01

    In this article a new parameterization of magic squares of order three is presented. This parameterization permits an easy computation of their inverses, eigenvalues, eigenvectors and adjoints. Some attention is paid to the Luoshu, one of the oldest magic squares.

  18. Model of directed lines for square ice with second-neighbor and third-neighbor interactions

    Science.gov (United States)

    Kirov, Mikhail V.

    2018-02-01

    The investigation of the properties of nanoconfined systems is one of the most rapidly developing scientific fields. Recently it has been established that water monolayer between two graphene sheets forms square ice. Because of the energetic disadvantage, in the structure of the square ice there are no longitudinally arranged molecules. The result is that the structure is formed by unidirectional straight-lines of hydrogen bonds only. A simple but accurate discrete model of square ice with second-neighbor and third-neighbor interactions is proposed. According to this model, the ground state includes all configurations which do not contain three neighboring unidirectional chains of hydrogen bonds. Each triplet increases the energy by the same value. This new model differs from an analogous model with long-range interactions where in the ground state all neighboring chains are antiparallel. The new model is suitable for the corresponding system of point electric (and magnetic) dipoles on the square lattice. It allows separately estimating the different contributions to the total binding energy and helps to understand the properties of infinite monolayers and finite nanostructures. Calculations of the binding energy for square ice and for point dipole system are performed using the packages TINKER and LAMMPS.

  19. Square tubing reduces cost of telescoping bridge crane hoist

    Science.gov (United States)

    Bernstein, G.; Graae, J.; Schraidt, J.

    1967-01-01

    Using standard square tubing in a telescoping arrangement reduces the cost of a bridge crane hoist. Because surface tolerances of square tubing need not be as accurate as the tubing used previously and because no spline is necessary, the square tubing is significantly less expensive than splined telescoping tubes.

  20. Estimating errors in least-squares fitting

    Science.gov (United States)

    Richter, P. H.

    1995-01-01

    While least-squares fitting procedures are commonly used in data analysis and are extensively discussed in the literature devoted to this subject, the proper assessment of errors resulting from such fits has received relatively little attention. The present work considers statistical errors in the fitted parameters, as well as in the values of the fitted function itself, resulting from random errors in the data. Expressions are derived for the standard error of the fit, as a function of the independent variable, for the general nonlinear and linear fitting problems. Additionally, closed-form expressions are derived for some examples commonly encountered in the scientific and engineering fields, namely ordinary polynomial and Gaussian fitting functions. These results have direct application to the assessment of the antenna gain and system temperature characteristics, in addition to a broad range of problems in data analysis. The effects of the nature of the data and the choice of fitting function on the ability to accurately model the system under study are discussed, and some general rules are deduced to assist workers intent on maximizing the amount of information obtained form a given set of measurements.

  1. Elastic least-squares reverse time migration

    KAUST Repository

    Feng, Zongcai

    2017-03-08

    We use elastic least-squares reverse time migration (LSRTM) to invert for the reflectivity images of P- and S-wave impedances. Elastic LSRTMsolves the linearized elastic-wave equations for forward modeling and the adjoint equations for backpropagating the residual wavefield at each iteration. Numerical tests on synthetic data and field data reveal the advantages of elastic LSRTM over elastic reverse time migration (RTM) and acoustic LSRTM. For our examples, the elastic LSRTM images have better resolution and amplitude balancing, fewer artifacts, and less crosstalk compared with the elastic RTM images. The images are also better focused and have better reflector continuity for steeply dipping events compared to the acoustic LSRTM images. Similar to conventional leastsquares migration, elastic LSRTM also requires an accurate estimation of the P- and S-wave migration velocity models. However, the problem remains that, when there are moderate errors in the velocity model and strong multiples, LSRTMwill produce migration noise stronger than that seen in the RTM images.

  2. Multilevel weighted least squares polynomial approximation

    KAUST Repository

    Haji-Ali, Abdul-Lateef

    2017-06-30

    Weighted least squares polynomial approximation uses random samples to determine projections of functions onto spaces of polynomials. It has been shown that, using an optimal distribution of sample locations, the number of samples required to achieve quasi-optimal approximation in a given polynomial subspace scales, up to a logarithmic factor, linearly in the dimension of this space. However, in many applications, the computation of samples includes a numerical discretization error. Thus, obtaining polynomial approximations with a single level method can become prohibitively expensive, as it requires a sufficiently large number of samples, each computed with a sufficiently small discretization error. As a solution to this problem, we propose a multilevel method that utilizes samples computed with different accuracies and is able to match the accuracy of single-level approximations with reduced computational cost. We derive complexity bounds under certain assumptions about polynomial approximability and sample work. Furthermore, we propose an adaptive algorithm for situations where such assumptions cannot be verified a priori. Finally, we provide an efficient algorithm for the sampling from optimal distributions and an analysis of computationally favorable alternative distributions. Numerical experiments underscore the practical applicability of our method.

  3. Interference Energy Spectrum of the Infinite Square Well

    Directory of Open Access Journals (Sweden)

    Mordecai Waegell

    2016-04-01

    Full Text Available Certain superposition states of the 1-D infinite square well have transient zeros at locations other than the nodes of the eigenstates that comprise them. It is shown that if an infinite potential barrier is suddenly raised at some or all of these zeros, the well can be split into multiple adjacent infinite square wells without affecting the wavefunction. This effects a change of the energy eigenbasis of the state to a basis that does not commute with the original, and a subsequent measurement of the energy now reveals a completely different spectrum, which we call the interference energy spectrum of the state. This name is appropriate because the same splitting procedure applied at the stationary nodes of any eigenstate does not change the measurable energy of the state. Of particular interest, this procedure can result in measurable energies that are greater than the energy of the highest mode in the original superposition, raising questions about the conservation of energy akin to those that have been raised in the study of superoscillations. An analytic derivation is given for the interference spectrum of a given wavefunction Ψ ( x , t with N known zeros located at points s i = ( x i , t i . Numerical simulations were used to verify that a barrier can be rapidly raised at a zero of the wavefunction without significantly affecting it. The interpretation of this result with respect to the conservation of energy and the energy-time uncertainty relation is discussed, and the idea of alternate energy eigenbases is fleshed out. The question of whether or not a preferred discrete energy spectrum is an inherent feature of a particle’s quantum state is examined.

  4. Motion of an elastic capsule in a square microfluidic channel.

    Science.gov (United States)

    Kuriakose, S; Dimitrakopoulos, P

    2011-07-01

    In the present study we investigate computationally the steady-state motion of an elastic capsule along the centerline of a square microfluidic channel and compare it with that in a cylindrical tube. In particular, we consider a slightly over-inflated elastic capsule made of a strain-hardening membrane with comparable shearing and area-dilatation resistance. Under the conditions studied in this paper (i.e., small, moderate, and large capsules at low and moderate flow rates), the capsule motion in a square channel is similar to and thus governed by the same scaling laws with the capsule motion in a cylindrical tube, even though in the channel the cross section in the upstream portion of large capsules is nonaxisymmetric (i.e., square-like with rounded corners). When the hydrodynamic forces on the membrane increase, the capsule develops a pointed downstream edge and a flattened rear (possibly with a negative curvature) so that the restoring tension forces are increased as also happens with droplets. Membrane tensions increase significantly with the capsule size while the area near the downstream tip is the most probable to rupture when a capsule flows in a microchannel. Because the membrane tensions increase with the interfacial deformation, a suitable Landau-Levich-Derjaguin-Bretherton analysis reveals that the lubrication film thickness h for large capsules depends on both the capillary number Ca and the capsule size a; our computations determine the latter dependence to be (in dimensionless form) h ~ a(-2) for the large capsules studied in this work. For small and moderate capsule sizes a, the capsule velocity Ux and additional pressure drop ΔP+ are governed by the same scaling laws as for high-viscosity droplets. The velocity and additional pressure drop of large thick capsules also follow the dynamics of high-viscosity droplets, and are affected by the lubrication film thickness. The motion of our large thick capsules is characterized by a Ux-U ~ h ~ a(-2

  5. Herpes Simplex 1 and Periopathogen Role in Peri-implantitis.

    Science.gov (United States)

    Parthiban, S; Ahmed, Nizar; Ramakrishnan, T; Balakumar, V; Raja, Manoj; Shekhar, Himanshu

    2017-05-01

    The objectives of this study were to compare the qualitative and quantitative profiles of herpes simplex virus type I (HSV-1) in implant surfaces between participants with peri-implantitis (PI) and Healthy peri-implant tissues and to quantitatively assess the relation between HSV-1 and periopathogens inside the microbiological profile associated with PI. A total of 40 patients with PI and 40 with healthy peri-implant tissues (HI) were recruited. Plaque samples from peri-implant sulcus and internal implant connections were analyzed using quantitative real-time polymerase chain reaction to detect and quantify HSV-1 and periodonto-pathogens. Frequencies of detection and levels of microorganisms were compared between PI and HI; the frequencies and levels of periodontopathogens were compared between HSV-1+ and HSV-1- PI to assess qualitative relations between HSV-1 and bacteria. Correlation between HSV-1 and periodontopatho-gens levels was assessed in PI and HI. A total of 77 dental implants affected by PI, and 113 HIs were included. The HSV-1 prevalence was slightly higher in PI compared with controls (33.3 vs 23.8%; p > 0.05); HSV-1 was detected in external samples more frequently compared with internal samples. The HSV-1-positive patients revealed higher median loads of Prevotella intermedia (Pi) and Campylobacter rectus (Cr) compared with HSV-1-negative patients. In the PI group, a significant positive correlation was evidenced between HSV-1 and Tannerella forsythia, Parvimonas micra (Pm), Fusobacterium nucleatum, and Cr levels, while in the HI, positive correlation between HSV-1 and Aggregatibacter actinomycetemcomitans, Pi, and Pm was established. The HSV-1 prevalence cannot be used to identify PI. The HSV-1 was found in similar levels of PI and HI patients after an average of 6 years of loaded implants. The HSV-1 prevalence cannot be used to identify implants with or without the presence of PI. Although HSV-1 is detected in PI site, HSV-1 may represent an

  6. [Herpes simplex virus vaccine studies: from past to present].

    Science.gov (United States)

    Us, Dürdal

    2006-10-01

    The dramatical increase in the prevalence of Herpes simplex virus (HSV) infections and the significant physical and psychosocial morbidity of HSV type 2 infections, generate the need for an efficacious HSV vaccine. The most important properties of HSVs that should be targeted for a successful vaccine are neuronal invasion, latency and reactivation in spite of specific host immune responses. The major expectation for an ideal HSV vaccine candidate is to induce sterilizing immunity, which must be effective at all portals of HSV entry; to prevent or reduce the symptomatic disease and to eliminate or at least to limit the asymptomatic viral shedding. The first vaccine studies have began in the 1920s and in the intervening eight decades there have been many attempts to develop an effective one. Although encouraging findings came from experiments in various animal models, human studies have been disappointing, unfortunately. The vaccine strategies that have undergone clinical evaluation until today included autoinoculation of live HSV, whole inactivated vaccines, attenuated live virus vaccines, modified live virus subunit vaccines, cell culture-derived subunit vaccines, recombinant subunit (glycoprotein) vaccines, DISC (Disabled Infectious Single Cycle) virus vaccines, viral vectors and naked DNA vaccines. In most of the clinical studies the failure of HSV vaccines in spite of inducing very high levels of specific neutralizing antibodies have emphasized that cell-mediated immune response, especially Thl type immunity is important in preventing both primary disease and recurrences with HSV, rather than humoral response. The most hopeful result was obtained with HSV-2 gD and alum/MPL vaccine in clinical studies. This vaccine was found 74% effective in preventing genital disease in HSV seronegative women but was not effective in men or seropositive women. In recent years it is possible to genetically engineer HSV to produce a vaccine strain that is protective without

  7. [Herpes simplex virus and malignancies of female genital organs].

    Science.gov (United States)

    Cokić-Damjanović, J; Horvat, E; Balog, A

    2001-01-01

    Primary herpes simplex virus (HSV) infections of female genital tract usually end with remission, while the virus remains in the organism--almost in the sacral ganglion in a latent form, protected from humoral and cellular immunity. Stress induces the virus and the result is recurrent genital infection. Frequent exacerbations damage some parts of vital cellular structures without cytolysis, but stimulate malignant transformations. Vulvar (portio vaginalis uteri) and endometrial tumor tissue samples were analyzed for HSV by direct and indirect fluorescent antibody technique (FAT). Pre and postoperative sera samples were analyzed for presence of anti-HSV antibodies--IgM and IgG by Elisa-Enzygnost method. Acellular filtrates obtained by ultrasonic destruction of malignant tissues were used as inoculum for rabbit corneal scarification. Out of 63 tissue samples, 42 were positive for HSV antigen i.e. 67.3%. According to location 50% of vulvar, 76% PVU and 65% of endometrial tissues were positive. This antigen induces production of virus specific antibodies. Two types of antigens are known: the so-called T-antigen persisting in the cell nucleus and cell-surface antigen--product of the viral genome and can be evidenced by immunofluorescence method. Anti HSV antibodies were present in 63 preoperative serum samples and belonged to IgG group, but not one to IgM, implying a long and chronic course of infection excluding acute primary. Out of 38 postoperative serums the titer of antibodies decreased in 36 evidently, but in two samples remained unchanged. Two samples of endometrial and one from PVU origin contained HSV antigen type one. In the remaining 16 samples HSV 2 antigen was present. Rabbit corneal scarification was the proof of complete infectious virus in malignant tissues. Acellular filtrate of malignant tissues served as inoculum. Corneas of examined rabbits showed a mild inflammation after 24 hours which disappeared in the next 24 hours. We could not isolate the

  8. Flow of power-law fluids in simplex atomizers

    Energy Technology Data Exchange (ETDEWEB)

    Mandal, A. [Department of Mechanical Engineering, University of Cincinnati, Cincinnati, OH 45221-0072 (United States); Jog, M.A. [Department of Mechanical Engineering, University of Cincinnati, Cincinnati, OH 45221-0072 (United States)], E-mail: Milind.Jog@uc.edu; Xue, J.; Ibrahim, A.A. [Department of Mechanical Engineering, University of Cincinnati, Cincinnati, OH 45221-0072 (United States)

    2008-10-15

    This paper presents a computational analysis of flow of time-independent, purely-viscous, power-law fluids in simplex atomizers using the volume-of-fluid (VOF) method. Flow of shear-thinning (0.4 < n < 1), Newtonian (n = 1) and shear thickening fluids (1 < n < 1.2) has been considered. The effect of power-law index and atomizer geometry on the flow and atomizer performance has been investigated. Three geometry parameters have been considered, viz., the atomizer constant which is the ratio of inlet area to the product of swirl chamber diameter and the exit diameter, the ratio of swirl chamber diameter to exit orifice diameter, and the length-to-diameter ratio of the exit orifice. The dimensionless film thickness at exit, spray cone angle, and the discharge coefficient for different values power-law index as well as those with varying atomizer geometry are reported. The pressure drop across the atomizer has been kept constant in all simulations. A change in the power-law index significantly alters the flow field in the in the swirl chamber of the atomizer. The velocity magnitudes and liquid film thickness at the orifice exit change with the power-law index. With fixed atomizer geometry, the pseudoplastic fluids tend to produce thinner liquid sheet, larger spray cone angle, and have lower discharge coefficient compared to dilatant fluids. Changes in the atomizer geometry have a significant impact on the flow for all values of power-law index. The spray cone angle decreases and the discharge coefficient and the film thickness increase with increasing atomizer constant. With increasing D{sub s}/d{sub o}, the dimensionless film thickness at exit increases whereas the dimensional film thickness decreases monotonically. The discharge coefficient increases and the spray cone angle decreases with increasingD{sub s}/d{sub o}. The discharge coefficient, the spray cone angle, and the film thickness decrease with increasing l{sub o}/d{sub o}. A significant finding is that the

  9. Structural basis for the antibody neutralization of Herpes simplex virus

    Energy Technology Data Exchange (ETDEWEB)

    Lee, Cheng-Chung; Lin, Li-Ling [Academia Sinica, Taipei 115, Taiwan (China); Academia Sinica, Taipei 115, Taiwan (China); Chan, Woan-Eng [Development Center for Biotechnology, New Taipei City 221, Taiwan (China); Ko, Tzu-Ping [Academia Sinica, Taipei 115, Taiwan (China); Academia Sinica, Taipei 115, Taiwan (China); Lai, Jiann-Shiun [Development Center for Biotechnology, New Taipei City 221, Taiwan (China); Ministry of Economic Affairs, Taipei 100, Taiwan (China); Wang, Andrew H.-J., E-mail: ahjwang@gate.sinica.edu.tw [Academia Sinica, Taipei 115, Taiwan (China); Academia Sinica, Taipei 115, Taiwan (China); Taipei Medical University, Taipei 110, Taiwan (China)

    2013-10-01

    The gD–E317-Fab complex crystal revealed the conformational epitope of human mAb E317 on HSV gD, providing a molecular basis for understanding the viral neutralization mechanism. Glycoprotein D (gD) of Herpes simplex virus (HSV) binds to a host cell surface receptor, which is required to trigger membrane fusion for virion entry into the host cell. gD has become a validated anti-HSV target for therapeutic antibody development. The highly inhibitory human monoclonal antibody E317 (mAb E317) was previously raised against HSV gD for viral neutralization. To understand the structural basis of antibody neutralization, crystals of the gD ectodomain bound to the E317 Fab domain were obtained. The structure of the complex reveals that E317 interacts with gD mainly through the heavy chain, which covers a large area for epitope recognition on gD, with a flexible N-terminal and C-terminal conformation. The epitope core structure maps to the external surface of gD, corresponding to the binding sites of two receptors, herpesvirus entry mediator (HVEM) and nectin-1, which mediate HSV infection. E317 directly recognizes the gD–nectin-1 interface and occludes the HVEM contact site of gD to block its binding to either receptor. The binding of E317 to gD also prohibits the formation of the N-terminal hairpin of gD for HVEM recognition. The major E317-binding site on gD overlaps with either the nectin-1-binding residues or the neutralizing antigenic sites identified thus far (Tyr38, Asp215, Arg222 and Phe223). The epitopes of gD for E317 binding are highly conserved between two types of human herpesvirus (HSV-1 and HSV-2). This study enables the virus-neutralizing epitopes to be correlated with the receptor-binding regions. The results further strengthen the previously demonstrated therapeutic and diagnostic potential of the E317 antibody.

  10. Public TCR Use by Herpes Simplex Virus-2-Specific Human CD8 CTLs

    NARCIS (Netherlands)

    Dong, Lichun; Li, Penny; Oenema, Tjitske; McClurkan, Christopher L.; Koelle, David M.

    2010-01-01

    Recombination of germline TCR alpha and beta genes generates polypeptide receptors for MHC peptide. Ag exposure during long-term herpes simplex infections may shape the T cell repertoire over time. We investigated the CD8 T cell response to HSV-2 in chronically infected individuals by sequencing the

  11. FECUNDITY OF FICUS WHITEFLY, SINGHIELLA SIMPLEX (HEMIPTERA: ALEYRODIDAE), AND ITS PREDATION BY DELPHASTUS CATALINAE (COLEOPTERA: COCCINELLIDAE)

    Science.gov (United States)

    Ficus Whitefly (Singhiella simplex) was first reported in Miami-Dade County in August 2007. This invasive pest causes infested plants to exhibit leaf yellowing, followed by leaf drop. The pest has been recorded on multiple ficus hosts including Ficus benjamina, F. altissima, F. bengalensis, F. micro...

  12. Partial revertant mosaicism of keratin 14 in a patient with recessive epidermolysis bullosa simplex

    NARCIS (Netherlands)

    Schuilenga-Hut, PHL; Scheffer, H; Pas, HH; Nijenhuis, Albertine; Buys, CHCM; Jonkman, MF

    A patient with recessive epidermolysis bullosa simplex due to a previously described homozygous KRT14 1842-2A-->C splice-site mutation was reexamined, because we unexpectedly found signs of revertant mosaicism. The germline mutation resulted in different aberrant transcripts containing premature

  13. Partial revertant mosaicism of keratin 14 in a patient with recessive epidermolysis bullosa simplex.

    NARCIS (Netherlands)

    Schuilenga-Hut, P.H.; Scheffer, H.; Pas, H.H.; Nijenhuis, M.; Buys, C.H.C.M.; Jonkman, M.F.

    2002-01-01

    A patient with recessive epidermolysis bullosa simplex due to a previously described homozygous KRT14 1842-2A-->C splice-site mutation was re-examined, because we unexpectedly found signs of revertant mosaicism. The germline mutation resulted in different aberrant transcripts containing premature

  14. Seroprevalence of IgG Antibodies to Herpes Simplex Virus Type-1 in ...

    African Journals Online (AJOL)

    Background: Herpes simplex virus type-1 (HSV-1) can cause chronic ulcerative infection in immunosuppressed children leading to latency with subsequent reactivate in the conjunctiva resulting in scarring, thickening of the cornea and blindness. They are also common cause of fatal sporadic encephalitis in 70% of ...

  15. Anti-herpes simplex virus activity of extracts from the culinary herbs ...

    African Journals Online (AJOL)

    This study demonstrates anti-herpes simplex virus activity of dichloromethane and methanol extracts of Ocimum sanctum L., Ocimum basilicum L. and Ocimum americanum L. Green monkey kidney cells were protected from HSV-2 infection by the dichloromethane extract of O. americanum L. and the methanol extract of O.

  16. Physically Based Modeling and Simulation with Dynamic Spherical Volumetric Simplex Splines

    Science.gov (United States)

    Tan, Yunhao; Hua, Jing; Qin, Hong

    2009-01-01

    In this paper, we present a novel computational modeling and simulation framework based on dynamic spherical volumetric simplex splines. The framework can handle the modeling and simulation of genus-zero objects with real physical properties. In this framework, we first develop an accurate and efficient algorithm to reconstruct the high-fidelity digital model of a real-world object with spherical volumetric simplex splines which can represent with accuracy geometric, material, and other properties of the object simultaneously. With the tight coupling of Lagrangian mechanics, the dynamic volumetric simplex splines representing the object can accurately simulate its physical behavior because it can unify the geometric and material properties in the simulation. The visualization can be directly computed from the object’s geometric or physical representation based on the dynamic spherical volumetric simplex splines during simulation without interpolation or resampling. We have applied the framework for biomechanic simulation of brain deformations, such as brain shifting during the surgery and brain injury under blunt impact. We have compared our simulation results with the ground truth obtained through intra-operative magnetic resonance imaging and the real biomechanic experiments. The evaluations demonstrate the excellent performance of our new technique. PMID:20161636

  17. Quadratic maximization on the unit simplex: structure, stability, genericity and application in biology

    NARCIS (Netherlands)

    Still, Georg J.; Ahmed, F.

    The paper deals with the simple but important problem of maximizing a (nonconvex) quadratic function on the unit simplex. This program is directly related to the concept of evolutionarily stable strategies (ESS) in biology. We discuss this relation and study optimality conditions, stability and

  18. Ficus whitefly, Singhiella simplex, and its predation by a coccinellid beetle, Delphastus catalinae

    Science.gov (United States)

    Ficus whitefly, Singhiella simplex, is a pest of ficus plant such as Ficus benjamina, F. altissima, F. bengalensis and others. This invasive pest causes plants to exhibit leaf yellowing, wilting, and eventually, leaf drop. There is little information on the effectiveness of insect predators to contr...

  19. REPRODUCTION OF THE FICUS WHITEFLY, SINGHIELLA SIMPLEX (HEMIPTERA: ALEYRODIDAE): A NEW INVASIVE PEST IN THE USA

    Science.gov (United States)

    Ficus Whitefly (Singhiella simplex) was first reported in Miami-Dade County in August 2007. This invasive pest causes infested plants to exhibit leaf yellowing, followed by leaf drop. The pest has been recorded on multiple ficus hosts including Ficus benjamina, F. altissima, F. bengalensis, F. micro...

  20. Predation of the ficus whitefly, Singhiella simplex by the coccinellid beetle, Delphastus catalinae

    Science.gov (United States)

    Ficus Whitefly (Singhiella simplex) was first reported in Miami-Dade County in August 2007. This invasive pest causes infested plants to exhibit leaf yellowing, followed by leaf drop. The pest has been recorded on multiple ficus hosts including Ficus benjamina, F. altissima, F. bengalensis, F. micro...

  1. Seroprevalences of herpes simplex virus type 1 and type 2 among pregnant women in the Netherlands.

    NARCIS (Netherlands)

    Gaytant, M.A.; Steegers, E.A.P.; Laere, M. van; Semmekrot, B.A.; Groen, J.; Weel, J.F.; Meijden, W.I. van der; Boer, K.; Galama, J.M.D.

    2002-01-01

    BACKGROUND: In the Netherlands 73% of cases of neonatal herpes are caused by herpes simplex virus type 1 (HSV-1), whereas in the United States a majority are caused by HSV type 2 (HSV-2).GOAL To understand this difference we undertook a seroepidemiological study on the prevalence of HSV-1 and HSV-2

  2. Seroprevalences of herpes simplex virus type 1 and type 2 among pregnant women in the Netherlands

    NARCIS (Netherlands)

    Gaytant, Michael A.; Steegers, Eric A. P.; van Laere, Marloes; Semmekrot, Ben A.; Groen, Jan; Weel, Jan F.; van der Meijden, Willem I.; Boer, Kees; Galama, Jochem M. D.

    2002-01-01

    BACKGROUND: In the Netherlands 73% of cases of neonatal herpes are caused by herpes simplex virus type 1 (HSV-1), whereas in the United States a majority are caused by HSV type 2 (HSV-2). GOAL To understand this difference we undertook a seroepidemiological study on the prevalence of HSV-1 and HSV-2

  3. Transmission of herpes simplex virus type 2 among factory workers in Ethiopia

    NARCIS (Netherlands)

    Kebede, Yenew; Dorigo-Zetsma, Wendelien; Mengistu, Yohannes; Mekonnen, Yared; Schaap, Ab; Wolday, Dawit; Sanders, Eduard J.; Messele, Tsehaynesh; Coutinho, Roel A.; Dukers, Nicole H. T. M.

    2004-01-01

    The herpes simplex virus type 2 (HSV-2) and human immunodeficiency virus (HIV) epidemics are believed to fuel each other, especially in sub-Saharan countries. In Ethiopia during 1997 - 2002, a retrospective study was conducted to examine risk factors for infection and transmission of HSV-2, in a

  4. Minimizing the Risk in the robust life-cycle production optimization using stochastic simplex approximate gradient

    NARCIS (Netherlands)

    Chen, B.; Fonseca, R.M.; Leeuwenburgh, O.; Reynolds, A.C.

    2017-01-01

    We develop a framework based on the lexicographic method and the newly developed Stochastic-Simplex-Approximate-Gradient (StoSAG) algorithm to maximize the expected net-present-value (NPV) and minimize the associated risk or uncertainty in robust life-cycle production optimization. With the

  5. Anti-herpes simplex virus activity of extracts from the culinary herbs ...

    African Journals Online (AJOL)

    user

    2011-01-31

    Jan 31, 2011 ... This study demonstrates anti-herpes simplex virus activity of dichloromethane and methanol extracts of Ocimum sanctum L., Ocimum basilicum L. and Ocimum americanum L. Green monkey kidney cells were protected from HSV-2 infection by the dichloromethane extract of O. americanum L. and the.

  6. Biology, ecology, and control of the Ficus whitefly, Singhiella simplex (Hemiptera: Aleyrodidae)

    Science.gov (United States)

    The Ficus whitefly, Singhiella simplex (Singh) (Hemiptera: Aleyrodidae), is an economic pest of Ficus plant species in India, Burma and China. Severe infestations result in leaf dropping or shedding and defoliation. Since its initial US report in south Florida in 2007, the whitefly has expanded its ...

  7. Life history and biological control of the ficus whitefly, Singhiella simplex (Hemiptera)

    Science.gov (United States)

    Ficus Whitefly (Singhiella simplex) was first reported in Miami-Dade County in August 2007. Since then, the whitefly has been found throughout southern Florida, as well as along both coasts of Florida up to central Florida. This invasive pest causes infested plants to exhibit leaf yellowing, followe...

  8. Life table analysis and development of Singhiella simplex (Hemiptera:Aleyrodidae) under different constant temperatures

    Science.gov (United States)

    The ficus whitefly, Singhiella simplex (Singh) (Hemiptera: Aleyrodidae), is a newly-invasive pest of ficus plants in the United States. Very little is known about its biology and life history. Here, we studied development and reproduction at 15, 20, 25, 27, 30 and 35°C. No immatures survived the 35°...

  9. Prevalence and clinical consequences of herpes simplex virus type 1 DNA in human cornea tissues

    NARCIS (Netherlands)

    L. Remeijer (Lies); R. Duan (Rui); J.M. van Dun (Jessica); M.A.W. Bettink; A.D.M.E. Osterhaus (Albert); G.M.G.M. Verjans (George)

    2009-01-01

    textabstractBackground. We determined the prevalence and clinical consequences of herpes simplex virus (HSV) type 1 (HSV-1), HSV type 2 (HSV-2), and varicella-zoster virus (VZV) in cornea tissues obtained after penetrating keratoplasty (PKP) was performed. Methods. The excised corneas of 83 patients

  10. Herpes simplex virus type 2 infections of the central nervous system

    DEFF Research Database (Denmark)

    Omland, Lars Haukali; Vestergaard, Bent Faber; Wandall, Johan

    2008-01-01

    Herpes simplex virus type 2 (HSV-2) infections of the central nervous system (CNS) are rare with meningitis as the most common clinical presentation. We have investigated the clinical spectrum of CNS infections in 49 adult consecutive patients with HSV-2 genome in the cerebrospinal fluid (CSF). HSV...

  11. 76 FR 48715 - Immunology and Microbiology Devices; Reclassification of the Herpes Simplex Virus Serological...

    Science.gov (United States)

    2011-08-09

    ... DEPARTMENT OF HEALTH AND HUMAN SERVICES Food and Drug Administration 21 CFR Part 866 [Docket No. FDA-2010-N-0429] Immunology and Microbiology Devices; Reclassification of the Herpes Simplex Virus... CFR part 866 is amended as follows: PART 866--IMMUNOLOGY AND MICROBIOLOGY DEVICES 0 1. The authority...

  12. 75 FR 59611 - Microbiology Devices; Reclassification of Herpes Simplex Virus Types 1 and 2 Serological Assays...

    Science.gov (United States)

    2010-09-28

    ... DEPARTMENT OF HEALTH AND HUMAN SERVICES Food and Drug Administration 21 CFR Part 866 [Docket No. FDA-2009-N-0344] Microbiology Devices; Reclassification of Herpes Simplex Virus Types 1 and 2 Serological Assays; Confirmation of Effective Date AGENCY: Food and Drug Administration, HHS. ACTION: Direct...

  13. 75 FR 59670 - Immunology and Microbiology Devices; Reclassification of the Herpes Simplex Virus Serological...

    Science.gov (United States)

    2010-09-28

    ... DEPARTMENT OF HEALTH AND HUMAN SERVICES Food and Drug Administration 21 CFR Part 866 [Docket No. FDA-2010-N-0429] Immunology and Microbiology Devices; Reclassification of the Herpes Simplex Virus... proposed that 21 CFR part 866 be amended as follows: PART 866--IMMUNOLOGY AND MICROBIOLOGY DEVICES 1. The...

  14. Lactoferrin Glu561Asp polymorphism is associated with susceptibility to herpes simplex keratitis

    DEFF Research Database (Denmark)

    Keijser, S; Jager, M J; Dogterom-Ballering, H C M

    2008-01-01

    Lactoferrin plays an important role in the defense against infections, including herpes simplex virus (HSV) keratitis. We studied the impact of three single nucleotide polymorphisms in the human lactoferrin gene on the susceptibility to HSV infections of the eye and the severity of such infections...

  15. Herpes Simplex Virus Infection in a University Health Population: Clinical Manifestations, Epidemiology, and Implications

    Science.gov (United States)

    Horowitz, Robert; Aierstuck, Sara; Williams, Elizabeth A.; Melby, Bernette

    2010-01-01

    Objective: The authors described clinical presentations of oral and genital herpes simplex virus (HSV) infections in a university health population and implications of these findings. Participants and Methods: Using a standardized data collection tool, 215 records of patients with symptomatic culture-positive HSV infections were reviewed. Results:…

  16. Studies on the DNA-excision repair in lymphocytes of patients with recurrent Herpes simplex

    International Nuclear Information System (INIS)

    Fanta, D.; Topaloglou, A.; Altmann, H.

    1978-01-01

    Investigations of the semiconservatrive DNA replication and the excision repair in lymphocytes of patients with recurrent herpes simplex showed defects that could lead to mutations in the DNA with following lower immuncompetence and possibility for activation of already present oncogenic virus formations within the cellular DNA

  17. Membrane prteins of herpes simplex infected cells. Immunological and biochemical studies

    NARCIS (Netherlands)

    Welling-Wester, Sijtske

    1981-01-01

    As a consequence of infection with herpes simplex virus (HSV), cells exhibit a number of alterations. One of these is expressed as a change in the polypeptide composition of the surface of the infected cells. In this study several methods used for the isolation of these polypeptides expressed on the

  18. Quantitative autoradiographic mapping of focal herpes simplex virus encephalitis using a radiolabeled antiviral drug

    International Nuclear Information System (INIS)

    Price, R.

    1984-01-01

    A method of mapping herpes simplex viral infection comprising administering a radiolabeled antiviral active 5-substituted 1-(2'-deoxy-2'-substituted-D-arabinofuranosyl) pyrimidine nucleoside to the infected subject, and scanning the area in which the infection is to be mapped for the radiolabel

  19. Mutations in KRT5 and KRT14 cause epidermolysis bullosa simplex in 75% of the patients

    NARCIS (Netherlands)

    Bolling, M. C.; Lemmink, H. H.; Jansen, G. H. L.; Jonkman, M. F.

    P>Background Epidermolysis bullosa simplex (EBS) is a mechanobullous genodermatosis that may be caused by mutations in the genes KRT5 and KRT14 encoding the basal epidermal keratins 5 (K5) and 14 (K14). Three main clinical subtypes of EBS exist, differing in onset, distribution and severity of skin

  20. Deconvolution of charged particle spectra from neutron depth profiling using Simplex method

    Czech Academy of Sciences Publication Activity Database

    Hnatowicz, Vladimír; Vacík, Jiří; Fink, Dietmar

    2010-01-01

    Roč. 81, č. 7 (2010), 073906/1-073906/7 ISSN 0034-6748 R&D Projects: GA MŠk(CZ) LC06041 Institutional research plan: CEZ:AV0Z10480505 Keywords : neutron depth profiling * Simplex method * NDP Subject RIV: BG - Nuclear, Atomic and Molecular Physics, Colliders Impact factor: 1.598, year: 2010

  1. Molecular requirement for sterols in herpes simplex virus entry and infectivity

    Science.gov (United States)

    Herpes simplex virus 1 (HSV-1) required cholesterol for virion-induced membrane fusion. HSV successfully entered DHCR24-/-cells, which lack a desmosterol-to-cholesterol conversion enzyme, indicating entry can occur independently of cholesterol. Depletion of desmosterol from these cells resulted in d...

  2. Differential in situ hybridization for herpes simplex virus typing in routine skin biopsies

    NARCIS (Netherlands)

    Botma, H. J.; Dekker, H.; van Amstel, P.; Cairo, I.; van den Berg, F. M.

    1995-01-01

    A herpes simplex virus (HSV) type 2 specific recombinant plasmid probe designated pH2S3 was constructed from non-HSV-1 crossreactive regions of the HSV-2 genome. DNA in situ hybridization on in vitro reconstructed tissue samples of sheep collagen matrix impregnated with herpes virus-infected human

  3. Herpes simplex virus 2 infection: molecular association with HIV and novel microbicides to prevent disease.

    Science.gov (United States)

    Suazo, Paula A; Tognarelli, Eduardo I; Kalergis, Alexis M; González, Pablo A

    2015-04-01

    Infection with herpes simplex viruses is one of the most ancient diseases described to affect humans. Infection with these viruses produces vexing effects to the host, which frequently recur. Infection with herpes simplex viruses is lifelong, and currently there is no vaccine or drug to prevent or cure infection. Prevalence of herpes simplex virus 2 (HSV-2) infection varies significantly depending on the geographical region and nears 20% worldwide. Importantly, HSV-2 is the first cause of genital ulcers in the planet. HSV-2 affects approximately 500 million people around the globe and significantly increases the likelihood of acquiring the human immunodeficiency virus (HIV), as well as its shedding. Thus, controlling HSV-2 infection and spread is of public health concern. Here, we review the diseases produced by herpes simplex viruses, the factors that modulate HSV-2 infection, the relationship between HSV-2 and HIV and novel therapeutic and prophylactic microbicides/antivirals under development to prevent infection and pathological outcomes produced by this virus. We also review mutations associated with HSV-2 resistance to common antivirals.

  4. Antiviral Activity of Crude Hydroethanolic Extract from Schinus terebinthifolia against Herpes simplex Virus Type 1.

    Science.gov (United States)

    Nocchi, Samara Requena; Companhoni, Mychelle Vianna Pereira; de Mello, João Carlos Palazzo; Dias Filho, Benedito Prado; Nakamura, Celso Vataru; Carollo, Carlos Alexandre; Silva, Denise Brentan; Ueda-Nakamura, Tânia

    2017-04-01

    Herpes simplex virus infections persist throughout the lifetime of the host and affect more than 80 % of the humans worldwide. The intensive use of available therapeutic drugs has led to undesirable effects, such as drug-resistant strains, prompting the search for new antiherpetic agents. Although diverse bioactivities have been identified in Schinus terebinthifolia , its antiviral activity has not attracted much attention. The present study evaluated the antiherpetic effects of a crude hydroethanolic extract from the stem bark of S. terebinthifolia against Herpes simplex virus type 1 in vitro and in vivo as well as its genotoxicity in bone marrow in mammals and established the chemical composition of the crude hydroethanolic extract based on liquid chromatography-diode array detector-mass spectrometry and MS/MS. The crude hydroethanolic extract inhibited all of the tested Herpes simplex virus type 1 strains in vitro and was effective in the attachment and penetration stages, and showed virucidal activity, which was confirmed by transmission electron microscopy. The micronucleus test showed that the crude hydroethanolic extract had no genotoxic effect at the concentrations tested. The crude hydroethanolic extract afforded protection against lesions that were caused by Herpes simplex virus type 1 in vivo . Liquid chromatography-diode array detector-mass spectrometry and MS/MS identified 25 substances, which are condensed tannins mainly produced by a B-type linkage and prodelphinidin and procyanidin units. Georg Thieme Verlag KG Stuttgart · New York.

  5. Herpes Simplex Virus (HSV-1 Encephalitis Mimicking Glioblastoma: Case Report and Review of the Literature

    Directory of Open Access Journals (Sweden)

    Burke A. Cunha

    2014-12-01

    Full Text Available Glioblastoma multiforme (GBM often presents as a brain mass with encephalitis. In a patient with GBM, subsequent presentation with new onset encephalitis may be due to another GBM or Herpes simplex virus 1 (HSV-1 encephalitis. We present a case of HSV-1 encephalitis mimicking GBM in a patient with previous GBM.

  6. Simultaneous genetic analysis of longitudinal means and covariance structure in the simplex model using twin data

    NARCIS (Netherlands)

    Dolan, C.V.; Molenaar, P.C.M.; Boomsma, D.I.

    1991-01-01

    D. Soerbom's (1974, 1976) simplex model approach to simultaneous analysis of means and covariance structure was applied to analysis of means observed in a single group. The present approach to the simultaneous biometric analysis of covariance and mean structure is based on the testable assumption

  7. Connecting the dots : analysis, development and applications of the SimpleX algorithm

    NARCIS (Netherlands)

    Kruip, Chael

    2011-01-01

    The SimpleX radiative transfer method is based on the interpretation of photons as particles interacting on a natural scale: the local mean free path. In our method, light is transported along the lines of an unstructured Delaunay mesh that encodes this natural distance and represents the physical

  8. Scaffold expulsion and genome packaging trigger stabilization of herpes simplex virus capsids

    NARCIS (Netherlands)

    Roos, W.H.; Radtke, K.; Kniesmeijer, E.G.R.; Geertsema, H.J.; Sodeik, B.; Wuite, G.J.L.

    2009-01-01

    Herpes simplex virus type 1 (HSV1) capsids undergo extensive structural changes during maturation and DNA packaging. As a result, they become more stable and competent for nuclear egress. To further elucidate this stabilization process, we used biochemical and nanoindentation approaches to analyze

  9. Scaffold expulsion and genome packaging trigger stabilization of Herpes Simplex Virus capsids

    NARCIS (Netherlands)

    Roos, W.H.; Radtke, K.; Kniesmeijer, E.; Geertsema, H.J.; Sodeik, B.; Wuite, G.J.L.

    2009-01-01

    Herpes simplex virus type 1 (HSV1) capsids undergo extensive structural changes during maturation and DNA packaging. As a result, they become more stable and competent for nuclear egress. To further elucidate this stabilization process, we used biochemical and nanoindentation approaches to analyze

  10. Does the cognitive architecture of simplex and multiplex ASD families differ?

    NARCIS (Netherlands)

    Oerlemans, Anoek M.; Hartman, Catharina A.; Franke, Barbara; Buitelaar, Jan K.; Rommelse, Nanda N. J.

    Children with an autism spectrum disorder (ASD) and their unaffected siblings from 54 simplex (SPX, one individual in the family affected) and 59 multiplex (MPX, two or more individuals affected) families, and 124 controls were assessed on intelligence, social cognition and executive functions. SPX

  11. Does the Cognitive Architecture of Simplex and Multiplex ASD Families Differ?

    Science.gov (United States)

    Oerlemans, Anoek M.; Hartman, Catharina A.; Franke, Barbara; Buitelaar, Jan K.; Rommelse, Nanda N. J.

    2016-01-01

    Children with an autism spectrum disorder (ASD) and their unaffected siblings from 54 simplex (SPX, one individual in the family affected) and 59 multiplex (MPX, two or more individuals affected) families, and 124 controls were assessed on intelligence, social cognition and executive functions. SPX and MPX ASD probands displayed similar cognitive…

  12. Does the cognitive architecture of simplex and multiplex ASD families differ?

    NARCIS (Netherlands)

    Oerlemans, A.M.; Hartman, C.A.; Franke, B.; Buitelaar, J.K.; Rommelse, N.N.J.

    2016-01-01

    Children with an autism spectrum disorder (ASD) and their unaffected siblings from 54 simplex (SPX, one individual in the family affected) and 59 multiplex (MPX, two or more individuals affected) families, and 124 controls were assessed on intelligence, social cognition and executive functions. SPX

  13. The Major Capsid Protein of Herpes Simplex Virus-1 Affects its

    African Journals Online (AJOL)

    Purpose: To investigate whether siRNA targeting viral protein 5 (VP5) can become a new treatment for herpes simplex virus type 1 (HSV-1). Methods: Flow cytometry was performed to determine the ratio of siRNA and lipo2000 to reach the highest transfection efficiency. Western blot and q-PCR were performed to determine ...

  14. Prevalence of herpes simplex, Epstein Barr and human papilloma viruses in oral lichen planus.

    Science.gov (United States)

    Yildirim, Benay; Sengüven, Burcu; Demir, Cem

    2011-03-01

    The aim of the present study was to assess the prevalence of Herpes Simplex virus, Epstein Barr virus and Human Papilloma virus -16 in oral lichen planus cases and to evaluate whether any clinical variant, histopathological or demographic feature correlates with these viruses. The study was conducted on 65 cases. Viruses were detected immunohistochemically. We evaluated the histopathological and demographic features and statistically analysed correlation of these features with Herpes Simplex virus, Epstein Barr virus and Human Papilloma virus-16 positivity. Herpes Simplex virus was positive in six (9%) cases and this was not statistically significant. The number of Epstein Barr virus positive cases was 23 (35%) and it was statistically significant. Human Papilloma virus positivity in 14 cases (21%) was statistically significant. Except basal cell degeneration in Herpes Simplex virus positive cases, we did not observe any significant correlation between virus positivity and demographic or histopathological features. However an increased risk of Epstein Barr virus and Human Papilloma virus infection was noted in oral lichen planus cases. Taking into account the oncogenic potential of both viruses, oral lichen planus cases should be detected for the presence of these viruses.

  15. Amino-terminal sequence of glycoprotein D of herpes simplex virus types 1 and 2

    International Nuclear Information System (INIS)

    Eisenberg, R.J.; Long, D.; Hogue-Angeletti, R.; Cohen, G.H.

    1984-01-01

    Glycoprotein D (gD) of herpes simplex virus is a structural component of the virion envelope which stimulates production of high titers of herpes simplex virus type-common neutralizing antibody. The authors caried out automated N-terminal amino acid sequencing studies on radiolabeled preparations of gD-1 (gD of herpes simplex virus type 1) and gD-2 (gD of herpes simplex virus type 2). Although some differences were noted, particularly in the methionine and alanine profiles for gD-1 and gD-2, the amino acid sequence of a number of the first 30 residues of the amino terminus of gD-1 and gD-2 appears to be quite similar. For both proteins, the first residue is a lysine. When we compared out sequence data for gD-1 with those predicted by nucleic acid sequencing, the two sequences could be aligned (with one exception) starting at residue 26 (lysine) of the predicted sequence. Thus, the first 25 amino acids of the predicted sequence are absent from the polypeptides isolated from infected cells

  16. Concomitant herpes simplex virus colitis and hepatitis in a man with ulcerative colitis: Case report and review of the literature.

    Science.gov (United States)

    Phadke, Varun K; Friedman-Moraco, Rachel J; Quigley, Brian C; Farris, Alton B; Norvell, J P

    2016-10-01

    Herpesvirus infections often complicate the clinical course of patients with inflammatory bowel disease; however, invasive disease due to herpes simplex virus is distinctly uncommon. We present a case of herpes simplex virus colitis and hepatitis, review all the previously published cases of herpes simplex virus colitis, and discuss common clinical features and outcomes. We also discuss the epidemiology, clinical manifestations, diagnosis, and management of herpes simplex virus infections, focusing specifically on patients with inflammatory bowel disease. A 43-year-old man with ulcerative colitis, previously controlled with an oral 5-aminosalicylic agent, developed symptoms of a colitis flare that did not respond to treatment with systemic corticosteroid therapy. One week later he developed orolabial ulcers and progressive hepatic dysfunction, with markedly elevated transaminases and coagulopathy. He underwent emergent total colectomy when imaging suggested bowel micro-perforation. Pathology from both the colon and liver was consistent with herpes simplex virus infection, and a viral culture of his orolabial lesions and a serum polymerase chain reaction assay also identified herpes simplex virus. He was treated with systemic antiviral therapy and made a complete recovery. Disseminated herpes simplex virus infection with concomitant involvement of the colon and liver has been reported only 3 times in the published literature, and to our knowledge this is the first such case in a patient with inflammatory bowel disease. The risk of invasive herpes simplex virus infections increases with some, but not all immunomodulatory therapies. Optimal management of herpes simplex virus in patients with inflammatory bowel disease includes targeted prophylactic therapy for patients with evidence of latent infection, and timely initiation of antiviral therapy for those patients suspected to have invasive disease.

  17. Phase transition in a modified square Josephson-junction array

    CERN Document Server

    Han, J

    1999-01-01

    We study the phase transition in a modified square proximity-coupled Josephson-junction array with small superconducting islands at the center of each plaquette. We find that the modified square array undergoes a Kosterlitz-Thouless-Berezinskii-like phase transition, but at a lower temperature than the simple square array with the same single-junction critical current. The IV characteristics, as well as the phase transition, resemble qualitatively those of a disordered simple square array. The effects of the presence of the center islands in the modified square array are discussed.

  18. Square Kilometre Array Science Data Processing

    Science.gov (United States)

    Nikolic, Bojan; SDP Consortium, SKA

    2014-04-01

    The Square Kilometre Array (SKA) is planned to be, by a large factor, the largest and most sensitive radio telescope ever constructed. The first phase of the telescope (SKA1), now in the design phase, will in itself represent a major leap in capabilities compared to current facilities. These advances are to a large extent being made possible by advances in available computer processing power so that that larger numbers of smaller, simpler and cheaper receptors can be used. As a result of greater reliance and demands on computing, ICT is becoming an ever more integral part of the telescope. The Science Data Processor is the part of the SKA system responsible for imaging, calibration, pulsar timing, confirmation of pulsar candidates, derivation of some further derived data products, archiving and providing the data to the users. It will accept visibilities at data rates at several TB/s and require processing power for imaging in range 100 petaFLOPS -- ~1 ExaFLOPS, putting SKA1 into the regime of exascale radio astronomy. In my talk I will present the overall SKA system requirements and how they drive these high data throughput and processing requirements. Some of the key challenges for the design of SDP are: - Identifying sufficient parallelism to utilise very large numbers of separate compute cores that will be required to provide exascale computing throughput - Managing efficiently the high internal data flow rates - A conceptual architecture and software engineering approach that will allow adaptation of the algorithms as we learn about the telescope and the atmosphere during the commissioning and operational phases - System management that will deal gracefully with (inevitably frequent) failures of individual units of the processing system In my talk I will present possible initial architectures for the SDP system that attempt to address these and other challenges.

  19. Numerous but rare: an exploration of magic squares.

    Science.gov (United States)

    Kitajima, Akimasa; Kikuchi, Macoto

    2015-01-01

    How rare are magic squares? So far, the exact number of magic squares of order n is only known for n ≤ 5. For larger squares, we need statistical approaches for estimating the number. For this purpose, we formulated the problem as a combinatorial optimization problem and applied the Multicanonical Monte Carlo method (MMC), which has been developed in the field of computational statistical physics. Among all the possible arrangements of the numbers 1; 2, …, n(2) in an n × n square, the probability of finding a magic square decreases faster than the exponential of n. We estimated the number of magic squares for n ≤ 30. The number of magic squares for n = 30 was estimated to be 6.56(29) × 10(2056) and the corresponding probability is as small as 10(-212). Thus the MMC is effective for counting very rare configurations.

  20. Surgical excision for recurrent herpes simplex virus 2 (HSV-2) anogenital infection in a patient with human immunodeficiency virus (HIV).

    Science.gov (United States)

    Arinze, Folasade; Shaver, Aaron; Raffanti, Stephen

    2017-10-01

    Recurrent anogenital herpes simplex virus infections are common in patients with human immunodeficiency virus (HIV), of whom approximately 5% develop resistance to acyclovir. We present a case of a 49-year-old man with HIV who had an 8-year history of recurrent left inguinal herpes simplex virus type 2 ulcerations. He initially responded to oral acyclovir, but developed resistance to acyclovir and eventually foscarnet. The lesion progressed to a large hypertrophic mass that required surgical excision, which led to resolution without recurrences. Our case highlights the importance of surgical excision as a treatment option in refractory herpes simplex virus anogenital infections.

  1. The "Knife-Cut Sign" Revisited: A Distinctive Presentation of Linear Erosive Herpes Simplex Virus Infection in Immunocompromised Patients.

    Science.gov (United States)

    Cohen, Philip R

    2015-10-01

    The "knife-cut sign" is a distinctive presentation of linear erosive herpes simplex virus infection in immunocompromised patients. To describe a man whose herpes simplex virus infection-related skin lesions demonstrated the "knife-cut sign" and to review the characteristics of reported immunosuppressed individuals with "knife-cut" cutaneous herpes simplex virus lesions. A man with multiple myeloma and post-stem cell transplant cutaneous graft-versus-host disease managed with systemic prednisone and sirolimus developed disseminated cutaneous herpes simplex virus infection with virus-associated linear ulcers of the inguinal folds and the area between his ear and scalp; the lesions at both sites had a distinctive "knife-cut" appearance. Using the PubMed database, an extensive literature search was performed on herpes simplex virus, immunocompromised patient, and "knife-cut sign". Herpes simplex virus infection-associated skin lesions that demonstrate the "knife-cut sign" present in patients who are immunosuppressed secondary to either an underlying medical condition or a systemic therapy or both. The distinctive virus-related cutaneous lesions appear as linear ulcers and fissures in intertriginous areas, such as the folds in the inguinal area, the vulva, and the abdomen; in addition, other sites include beneath the breast, within the gluteal cleft, and the area between the ear and the scalp. Not only herpes simplex virus-2, but also herpes simplex virus-1 has been observed as the causative viral serotype; indeed, herpes simplex virus-1 has been associated with genital and inframammary lesions in addition to those above the neck. Direct fluorescent antibody testing is a rapid method for confirming the clinically suspected viral infection; however, since false-negative direct fluorescent antibody testing occurred in some of the patients, it may be prudent to also perform viral cultures and possibly lesional skin biopsies to establish the diagnosis. The herpes simplex

  2. Mycosis Inhibits Cannibalism by Melanoplus sanguinipes, M. differentialis, Schistocerca americana, and Anabrus simplex

    Science.gov (United States)

    Jaronski, Stefan T.

    2013-01-01

    Cannibalism is common among the Acrididae and the Mormon cricket, Anabrus simplex Haldeman (Orthoptera: Tettigoniidae). This behavior has been proposed as a mechanism for the horizontal transmission of Microsporida and entomopathogenic fungi. Aanecdotal observations suggested that the migratory grasshopper, Melanoplus sanguinipes Fabricius (Acrididae), and A. simplex did not eat cadavers that had been killed by insect pathogenic fungi. The hypothesis tested was that A. simplex or M. sanguinipes would not cannibalize individuals freshly killed by the entomopathogenic fungi, Beauveria bassiana Bals.-Criv. (Vuill.) (Hypocreales: Clavicipitaceae), or Metarhizium acridum (Driver and Milner) Bischoff, Rehner, and Humber. Cannibalism was examined in a series of no-choice tests with individual insects. Test insects included healthy adults of M. sanguinipes; the differential grasshopper, M. differentialis (Thomas); the American grasshopper, Schistocerca americana (Drury) (Acrididae); and A. simplex. Individual, starved Acrididae or A. simplex were confined in small cages with either a fungus-killed (but unsporulated) or uninfected cadaver. The insects were then observed periodically for the first 4 hr. After 24 hr, the cadavers were scored for the degree to which they had been consumed. Very few mycotic cadavers were fed upon by the healthy insects, and, at most only the tarsi were eaten. All four species generally refused to eat fungus-infected cadavers. In contrast, freeze-killed cadavers were partly or entirely consumed by most of the test insects, often within a few hours. Transmission of infection through contact in these tests was between 0–18.9%, depending upon the fungus and insect species, and was lower than the prevalence of cannibalism in all cases. PMID:24786183

  3. Analysis of colorectal cancer and polyp for presence herpes simplex virus and cytomegalovirus DNA sequences by polymerase chain reaction

    Directory of Open Access Journals (Sweden)

    Sahar Mehrabani khasraghi

    2016-05-01

    Full Text Available Introduction: In recent years, it was demonstrated that there is a clear association between the complicated course of colorectal cancer (CRC and the presence of herpes viruses. Despite a great number of published reports, the exact pathogenic role of herpes viruses remains unclear in these patients. The purpose of this study is to explore the prevalence of herpes simplex virus (HSV and cytomegalovirus (CMV in patients with CRC and polyp in comparison with healthy subjects using the polymerase chain reaction (PCR method. Methods: In this case-control study, 15 biopsies of patients with CRC and 20 colorectal polyp sample were selected. From each patient, two tissue samples were obtained: one sample from malignant tissue, and the other from normal colorectal tissue in an area located 15 cm away from the malignant tissue. Furthermore, 35 samples from healthy people as controls were selected. After DNA extraction, PCR was used to determine HSV and CMV genomes by specific primers. A statistical analysis was performed using the chi-square test. Results: Five CRC patients (33.3% had HSV DNA detected in both the malignant and the matched normal tissue. Five CRC patients (33.3% and seven polyp patients (35.0% had CMV DNA detected in both the malignant and the matched normal tissue. HSV DNA was found in 20% and CMV DNA in 37.1% of samples from healthy people as a control group. Thus, no significant association was observed between the prevalence of HSV and CMV, and an incidence of CRC and polyps according to the location of the samples as compared with the control group. Conclusion: The findings demonstrated that there is no direct molecular evidence to support the association between HSV and CMV and human colorectal malignancies. However, the results from this study do not exclude a possible oncogenic role of these viruses in the neoplastic development of colon cells.

  4. New approach to breast cancer CAD using partial least squares and kernel-partial least squares

    Science.gov (United States)

    Land, Walker H., Jr.; Heine, John; Embrechts, Mark; Smith, Tom; Choma, Robert; Wong, Lut

    2005-04-01

    Breast cancer is second only to lung cancer as a tumor-related cause of death in women. Currently, the method of choice for the early detection of breast cancer is mammography. While sensitive to the detection of breast cancer, its positive predictive value (PPV) is low, resulting in biopsies that are only 15-34% likely to reveal malignancy. This paper explores the use of two novel approaches called Partial Least Squares (PLS) and Kernel-PLS (K-PLS) to the diagnosis of breast cancer. The approach is based on optimization for the partial least squares (PLS) algorithm for linear regression and the K-PLS algorithm for non-linear regression. Preliminary results show that both the PLS and K-PLS paradigms achieved comparable results with three separate support vector learning machines (SVLMs), where these SVLMs were known to have been trained to a global minimum. That is, the average performance of the three separate SVLMs were Az = 0.9167927, with an average partial Az (Az90) = 0.5684283. These results compare favorably with the K-PLS paradigm, which obtained an Az = 0.907 and partial Az = 0.6123. The PLS paradigm provided comparable results. Secondly, both the K-PLS and PLS paradigms out performed the ANN in that the Az index improved by about 14% (Az ~ 0.907 compared to the ANN Az of ~ 0.8). The "Press R squared" value for the PLS and K-PLS machine learning algorithms were 0.89 and 0.9, respectively, which is in good agreement with the other MOP values.

  5. Utilização do planejamento experimental em rede simplex no estudo de resíduo de rocha ornamental como filler para obtenção de máxima compacidade Use of simplex lattice experimental design in the study of ornamental rock waste as filler to obtain maximum compaction

    Directory of Open Access Journals (Sweden)

    A. Z. Destefani

    2011-12-01

    Full Text Available A utilização de agregados industrializados vem crescendo ao longo dos anos para atender a grande demanda da construção civil devido ao crescimento econômico do país. O objetivo deste trabalho foi utilizar o planejamento experimental em Rede Simplex para avaliar o efeito da adição do resíduo de rocha ornamental como filler na composição de misturas ternárias (brita 0, pó de pedra e resíduo, que levem a máxima compacidade (densidade seca aparente máxima. Foram tomados dezesseis pontos experimentais, cujos teores dos materiais utilizados variaram de 0 a 100%. O modelo em rede simplex cúbico completo apresentou melhor ajuste aos resultados experimentais, o qual resulta em respostas estatisticamente mais adequadas para as composições estudadas. A superfície de resposta gerada indicou que a densidade seca aparente máxima de 2,0 g/cm³ foi obtida para a composição ternária: 63% de brita 0/17% de pó de pedra/20% de resíduo de rocha ornamental. Portanto, o uso de resíduo de rocha ornamental como filler em agregados para a construção civil pode ser uma alternativa viável para deposição final deste abundante resíduo de forma ambientalmente correta.The use of industrial aggregates has grown over the years to meet the great demand of the civil construction due to the country's economical growth. The aim of this work was to use the experimental design in Simplex Lattice to evaluate the effect of the addition of ornamental rock waste as filler in the composition of ternary mixtures (crushed rock 0, stone powder, rock waste, leading to maximum compaction (maximum apparent dry density. Sixteen experimental points were taken, whose contents of the used materials ranged from 0 to 100%. The complete cubic simplex model showed to best fit to the experimental results, which results in more statistically appropriated responses to the studied compositions. The response surface generated indicated that the maximum apparent dry density (2

  6. FC LSEI WNNLS, Least-Square Fitting Algorithms Using B Splines

    International Nuclear Information System (INIS)

    Hanson, R.J.; Haskell, K.H.

    1989-01-01

    1 - Description of problem or function: FC allows a user to fit dis- crete data, in a weighted least-squares sense, using piece-wise polynomial functions represented by B-Splines on a given set of knots. In addition to the least-squares fitting of the data, equality, inequality, and periodic constraints at a discrete, user-specified set of points can be imposed on the fitted curve or its derivatives. The subprograms LSEI and WNNLS solve the linearly-constrained least-squares problem. LSEI solves the class of problem with general inequality constraints, and, if requested, obtains a covariance matrix of the solution parameters. WNNLS solves the class of problem with non-negativity constraints. It is anticipated that most users will find LSEI suitable for their needs; however, users with inequalities that are single bounds on variables may wish to use WNNLS. 2 - Method of solution: The discrete data are fit by a linear combination of piece-wise polynomial curves which leads to a linear least-squares system of algebraic equations. Additional information is expressed as a discrete set of linear inequality and equality constraints on the fitted curve which leads to a linearly-constrained least-squares system of algebraic equations. The solution of this system is the main computational problem solved

  7. Applied noncentral Chi-squared distribution in CFAR detection of hyperspectral projected images

    Science.gov (United States)

    Li, Zhiyong; Chen, Dong; Shi, Gongtao; Yang, Guopeng; Wang, Gang

    2015-10-01

    In this paper, the noncentral chi-squared distribution is applied in the Constant False Alarm Rate (CFAR) detection of hyperspectral projected images to distinguish the anomaly points from background. Usually, the process of the hyperspectral anomaly detectors can be considered as a linear projection. These operators are linear transforms and their results are quadratic form which comes from the transform of spectral vector. In general, chi-squared distribution could be the proper choice to describe the statistical characteristic of this projected image. However, because of the strong correlation among the bands, the standard central chi-squared distribution often cannot fit the stochastic characteristic of the projected images precisely. In this paper, we use a noncentral chi-squared distribution to approximate the projected image of subspace based anomaly detectors. Firstly, the statistical modal of the projected multivariate data is analysed, and a noncentral chi-squared distribution is deduced. Then, the approach of the parameters calculation is introduced. At last, the aerial hyperspectral images are used to verify the effectiveness of the proposed method in tightly modeling the projected image statistic distribution.

  8. Mechanic properties analysis of quasi-square honeycomb sandwich structure′s core

    Directory of Open Access Journals (Sweden)

    Guan TONG

    2017-12-01

    Full Text Available In order to illustrate the relationship between the quasi-square-honeycomb structure and the hexagonal honeycomb structure, after decomposing the quasi-square honeycomb sandwich structure into unique T-shaped cell, the equivalent elastic constants equations of T-shaped cell model are derived respectively by applying Euler beam theory and energy method. At the same time, the quasi-square honeycomb's characteristic structure parameters are substituted into the equivalent elastic constants equations which are derived by the classical method of a hexagonal honeycomb core, and the same results are obtained as that of the preceding both methods. It is proved that the quasi-square-honeycomb structure is an evolution of hexagonal honeycomb. The limitations and application scope of the two classical honeycomb formulas are pointed out. The research of the structural characteristics of the square-shaped honeycomb shows that the classical cellular theoretical formula are singular and inaccurate when the feature angle values equal to zero or near zero. This study has important reference value for the subsequent research and improvement of the theories about cellular structure mechanical properties.

  9. The etiology of idiopathic sudden sensorineural hearing loss - Experimental herpes simplex virus infections of the inner ear

    NARCIS (Netherlands)

    Stokroos, RJ; Albers, FWJ; Schirm, J

    Hypothesis: Experimentally induced herpes simplex virus type 1 (HSV-1) labyrinthitis provides a suitable model for idiopathic sudden sensorineural hearing loss (ISSHL). Background: Viral labyrinthitis has been postulated to play a role in the pathophysiology of ISSHL. Circumstantial evidence is

  10. Comparison of direct immunofluorescence and direct immunoperoxidase procedures for detection of herpes simplex virus antigen in lesion specimens.

    OpenAIRE

    Schmidt, N J; Dennis, J; Devlin, V; Gallo, D; Mills, J

    1983-01-01

    Direct immunofluorescence and direct immunoperoxidase staining were equally sensitive and specific for detection of herpes simplex virus antigen in lesion specimens, and each method showed 82% agreement with virus isolation results.

  11. COMPLEX DIAGNOSTICS AND MONITORING OF PRIMARY GLAUCOMA SIMPLEX WITH USE OF COMPUTER COLORIMETRIC ANALYSIS AND DUPLEX DOPPLEROGRAPHY

    Directory of Open Access Journals (Sweden)

    I.O. Kolbenev

    2009-09-01

    Full Text Available Glaucoma simplex is one of the basic causes of blindness. The main problem of glaucoma is its early recognition. It's well known that changes of anatomic structure of each organ are preceded by functional disorders, including disturbances of hemodynamics. Method of computer colorimetric analysis of disk of optic nerve (DON was worked out for the purpose of objective evaluation of its chroma as one of hemodynamics detection criteria. Computer program for analysis of DON chroma with calculation of integrated index (color index was developed. DON chroma was analyzed in the group of persons suspected of glaucoma, in the group of patients with glaucoma simplex and in healthy people. This method along with confocal scanning tomography of DON allows to evaluate objectively in dynamics its state in the presence of glaucoma simplex. These methods are necessary to be used in complex for diagnostics of early stages of glaucoma simplex.

  12. Métodos do tipo dual simplex para problemas de otimização linear canalizados

    Directory of Open Access Journals (Sweden)

    Ricardo Silveira Sousa

    2005-12-01

    Full Text Available Neste artigo estudamos o problema de otimização linear canalizado (restrições e variáveis canalizadas, chamado formato geral e desenvolvemos métodos do tipo dual simplex explorando o problema dual, o qual é linear por partes, num certo sentido não-linear. Várias alternativas de busca unidimensional foram examinadas. Experimentos computacionais revelam que a busca unidimensional exata na direção dual simplex apresenta melhor desempenho.In this paper we study the linear optimization problem lower and upper constrained (i.e., there are lower and upper bounds on constraints and variables and develop dual simplex methods that explore the dual problem, which is piecewise linear, in some sense nonlinear. Different one-dimensional searches were examined. Computational experiments showed that the exact one-dimensional search in the dual simplex direction has the best performance.

  13. Utilizing Minkowski functionals for image analysis: a marching square algorithm

    International Nuclear Information System (INIS)

    Mantz, Hubert; Jacobs, Karin; Mecke, Klaus

    2008-01-01

    Comparing noisy experimental image data with statistical models requires a quantitative analysis of grey-scale images beyond mean values and two-point correlations. A real-space image analysis technique is introduced for digitized grey-scale images, based on Minkowski functionals of thresholded patterns. A novel feature of this marching square algorithm is the use of weighted side lengths for pixels, so that boundary lengths are captured accurately. As examples to illustrate the technique we study surface topologies emerging during the dewetting process of thin films and analyse spinodal decomposition as well as turbulent patterns in chemical reaction–diffusion systems. The grey-scale value corresponds to the height of the film or to the concentration of chemicals, respectively. Comparison with analytic calculations in stochastic geometry models reveals a remarkable agreement of the examples with a Gaussian random field. Thus, a statistical test for non-Gaussian features in experimental data becomes possible with this image analysis technique—even for small image sizes. Implementations of the software used for the analysis are offered for download

  14. Ordinary least squares regression is indicated for studies of allometry.

    Science.gov (United States)

    Kilmer, J T; Rodríguez, R L

    2017-01-01

    When it comes to fitting simple allometric slopes through measurement data, evolutionary biologists have been torn between regression methods. On the one hand, there is the ordinary least squares (OLS) regression, which is commonly used across many disciplines of biology to fit lines through data, but which has a reputation for underestimating slopes when measurement error is present. On the other hand, there is the reduced major axis (RMA) regression, which is often recommended as a substitute for OLS regression in studies of allometry, but which has several weaknesses of its own. Here, we review statistical theory as it applies to evolutionary biology and studies of allometry. We point out that the concerns that arise from measurement error for OLS regression are small and straightforward to deal with, whereas RMA has several key properties that make it unfit for use in the field of allometry. The recommended approach for researchers interested in allometry is to use OLS regression on measurements taken with low (but realistically achievable) measurement error. If measurement error is unavoidable and relatively large, it is preferable to correct for slope attenuation rather than to turn to RMA regression, or to take the expected amount of attenuation into account when interpreting the data. © 2016 European Society For Evolutionary Biology. Journal of Evolutionary Biology © 2016 European Society For Evolutionary Biology.

  15. Infiltration Pattern of Blood Monocytes into the Central Nervous System during Experimental Herpes Simplex Virus Encephalitis.

    Directory of Open Access Journals (Sweden)

    Rafik Menasria

    Full Text Available The kinetics and distribution of infiltrating blood monocytes into the central nervous system and their involvement in the cerebral immune response together with resident macrophages, namely microglia, were evaluated in experimental herpes simplex virus 1 (HSV-1 encephalitis (HSE. To distinguish microglia from blood monocyte-derived macrophages, chimeras were generated by conditioning C57BL/6 recipient mice with chemotherapy regimen followed by transplantation of bone morrow-derived cells that expressed the green fluorescent protein. Mice were infected intranasally with a sub-lethal dose of HSV-1 (1.2 x 10(6 plaque forming units. Brains were harvested prior to and on days 4, 6, 8 and 10 post-infection for flow cytometry and immunohistochemistry analysis. The amounts of neutrophils (P < 0.05 and "Ly6C hi" inflammatory monocytes (P < 0.001 significantly increased in the CNS compared to non-infected controls on day 6 post-infection, which corresponded to more severe clinical signs of HSE. Levels decreased on day 8 for both leukocytes subpopulations (P < 0.05 for inflammatory monocytes compared to non-infected controls to reach baseline levels on day 10 following infection. The percentage of "Ly6C low" patrolling monocytes significantly increased (P < 0.01 at a later time point (day 8, which correlated with the resolution phase of HSE. Histological analysis demonstrated that blood leukocytes colonized mostly the olfactory bulb and the brainstem, which corresponded to regions where HSV-1 particles were detected. Furthermore, infiltrating cells from the monocytic lineage could differentiate into activated local tissue macrophages that express the microglia marker, ionized calcium-binding adaptor molecule 1. The lack of albumin detection in the brain parenchyma of infected mice showed that the infiltration of blood leukocytes was not necessarily related to a breakdown of the blood-brain barrier but could be the result of a functional recruitment. Thus

  16. A Risk Comparison of Ordinary Least Squares vs Ridge Regression

    OpenAIRE

    Dhillon, Paramveer S.; Foster, Dean P.; Kakade, Sham M.; Ungar, Lyle H.

    2011-01-01

    We compare the risk of ridge regression to a simple variant of ordinary least squares, in which one simply projects the data onto a finite dimensional subspace (as specified by a Principal Component Analysis) and then performs an ordinary (un-regularized) least squares regression in this subspace. This note shows that the risk of this ordinary least squares method is within a constant factor (namely 4) of the risk of ridge regression.

  17. Space and protest: A tale of two Egyptian squares

    OpenAIRE

    Mohamed, A.A.; Van Nes, A.; Salheen, M.A.

    2015-01-01

    Protests and revolts take place in public space. How they can be controlled or how protests develop depend on the physical layout of the built environment. This study reveals the relationship between urban space and protest for two Egyptian squares: Tahrir Square and Rabaa Al-Adawiya in Cairo. For analysis, the research uses space syntax method. The results of this analysis are then compared with descriptions of the protest behaviour. As it turns out, the spatial properties of Tahrir square s...

  18. PREVALENCE OF HERPES SIMPLEX VIRUS TYPE 2 AND RISK FACTORS ASSOCIATED WITH THIS INFECTION IN WOMEN IN SOUTHERN BRAZIL

    Directory of Open Access Journals (Sweden)

    Thais Duquia Moraes Caldeira

    2013-09-01

    Full Text Available SUMMARY The herpes simplex virus type 2 (HVS-2 is the most prevalent infection worldwide. It is a cofactor in the acquisition of human immunodeficiency virus (HIV and the persistence of human papillomavirus (HPV. This study evaluated the prevalence of HSV-2, using the polymerase chain reaction (PCR, and associated factors in patients treated at the Federal University of Rio Grande (FURG and Basic Health Units (BHU in Rio Grande, Brazil. The observed prevalence of HSV-2 was 15.6%. Among the 302 women studied, 158 had received assistance in BHU and 144 were treated at FURG. The prevalence of HSV-2 in these groups was 10.8% and 20.8%, respectively, RR 1.9 and p = 0.012. Knowledge about the Pap smear, and the presence of lesions showed no association with HSV-2 infection. Multivariate analysis showed that the variable that most influenced the risk of HSV-2 infection was the presence of HIV infection, with a relative risk of 1.9 and p = 0.04. Discussion: Genital ulcers are an important entry point for HIV, and condom use is an important strategy to reduce transmission of HIV and HSV-2.

  19. Comparison of an avidin-biotin immunoassay with three commercially available immunofluorescence kits for typing of herpes simplex virus.

    OpenAIRE

    Barnard, D L; Johnson, F B; Richards, D F

    1985-01-01

    An avidin-biotin complex system was compared with three commercially available immunofluorescence kits for serotyping herpes simplex virus isolates from clinical specimens. Sensitivity values showed that the Electro-Nucleonics and Immulok reagents were useful in detecting the presence of virus, whereas the predictive values showed that the Syva and Immulok reagents possessed adequate discrimination between the herpes simplex virus serotypes. The avidin-biotin complex system was equal or super...

  20. Effect of Prior Immunization on Induction of Cervical Cancer in Mice by Herpes Simplex Virus Type 2

    Science.gov (United States)

    Budd Wentz, W.; Heggie, Alfred D.; Anthony, Donald D.; Reagan, James W.

    1983-12-01

    Previous studies at this laboratory showed that repeated application of inactivated herpes simplex virus type 2 to the mouse cervix produces premalignant and malignant lesions. In the present study mice were inoculated with inactivated herpes simplex virus type 2 or control solution and Freund's adjuvant by intraperitoneal and subcutaneous routes before exposure of the cervix to inactivated virus. It appears that immunization with inactivated virus conferred a protection against the induction of cervical carcinoma.

  1. Optimization of a DPP-BOTDA sensor with 25 cm spatial resolution over 60 km standard single-mode fiber using Simplex codes and optical pre-amplification.

    Science.gov (United States)

    Soto, Marcelo A; Taki, Mohammad; Bolognini, Gabriele; Di Pasquale, Fabrizio

    2012-03-26

    Sub-meter distributed optical fiber sensing based on Brillouin optical time-domain analysis with differential pulse-width pairs (DPP-BOTDA) is combined with the use of optical pre-amplification and pulse coding. In order to provide significant measurement SNR enhancement and to avoid distortions in the Brillouin gain spectrum due to acoustic-wave pre-excitation, the pulse width and duty cycle of Simplex coding based on return-to-zero pulses are optimized through simulations. In addition, the use of linear optical pre-amplification increases the receiver sensitivity and the overall dynamic range of DPP-BOTDA measurements. Experimental results demonstrate for first time a spatial resolution of ~25 cm over a 60 km standard single-mode fiber (equivalent to ~240 k discrete sensing points) with temperature resolution of 1.2°C and strain resolution of 24 με.

  2. Discrete Wavelet Transform-Partial Least Squares Versus Derivative ...

    African Journals Online (AJOL)

    Discrete Wavelet Transform-Partial Least Squares Versus Derivative Ratio Spectrophotometry for Simultaneous Determination of Chlorpheniramine Maleate and Dexamethasone in the Presence of Parabens in Pharmaceutical Dosage Form.

  3. Discrete phase-space approach to mutually orthogonal Latin squares

    International Nuclear Information System (INIS)

    Gaeta, Mario; Klimov, Andrei B; Matteo, Olivia Di; Guise, Hubert de

    2014-01-01

    We show there is a natural connection between Latin squares and commutative sets of monomials defining geometric structures in finite phase-space of prime power dimensions. A complete set of such monomials defines a mutually unbiased basis (MUB) and may be associated with a complete set of mutually orthogonal Latin squares (MOLS). We translate some possible operations on the monomial sets into isomorphisms of Latin squares, and find a general form of permutations that map between Latin squares corresponding to unitarily equivalent mutually unbiased sets. (paper)

  4. Molecular and serologic diagnostic approaches; the prevalence of herpes simplex in idiopathic men infertile

    Science.gov (United States)

    Amirjannati, Nasser; Yaghmaei, Farhad; Akhondi, Mohammad Mehdi; Nasiri, Mahboubeh; Heidari-Vala, Hamed; Sehhat, Zahra

    2014-01-01

    Background: Human pathogens that can cause infertility may also affect sperm count and quality. Viral infections can be considered as direct and/or indirect cause of male factor infertility. Objective: Our goal was to investigate the prevalence of herpes simplex virus in the semen of infertile men attending the Avicenna Infertility Clinic, and to compare it with the herpes virus serology results. Materials and Methods: This cross sectional study was conducted during 2009-2010. Infertile men participating without any clinical signs of infection with herpes simplex virus, and no obvious cause for their infertility were included. Semen and blood samples were used for Polymerase Chain Reaction (PCR) and serologic testing for these people. Two samples were collected: one ml semen sample to verify the existence of genital herpes simplex virus in infertile men, and blood samples of 217 individuals tested for antibodies to herpes simplex virus. Data were analyzed by SPSS 16. Results: According to the PCR results of semen samples the prevalence of herpes simplex in semen was 12% and serologic test showed 3.2% prevalence within blood. Nine to 10% of IgM negative were PCR positive and only 2-3% of IgM positive were PCR positive. Between herpes serologic studies with positive controls and negative controls by using both tests, there was a significant positive relationship (r=0.718 and p<0.001). The relationship between semen PCR test results and serological survey of herpes patients with a negative control in both Pearson and Spearman tests was positive and significant (r=0.229 and p=0.001). Correlation between the PCR results of semen samples with two positive control subjects and a positive IgM test was statistically confirmed (r=0.235 and p<0.001). Conclusion: We recommend that if there is suspicion to herpes simplex as a microorganism that theoretically could impact semen parameters and cause infertility it is prudent to use PCR technique on semen sample rather than ELISA

  5. Variations on a classical theme: On the formal relationship between magnitudes per square arcsecond and luminance

    Directory of Open Access Journals (Sweden)

    Salvador Bará

    2017-12-01

    Full Text Available The formal link between magnitudes per square arcsecond and luminance is discussed in this paper. Directly related to the human visual system, luminance is defined in terms of the spectral radiance of the source, weighted by the CIE V(l luminous efficiency function, and scaled by the 683 lm/W luminous efficacy constant. In consequence, any exact and spectrum-independent relationship between luminance and magnitudes per square arcsecond requires that the last ones be measured precisely in the CIE V(l band. The luminance value corresponding to mVC=0 (zero-point of the CIE V(l magnitude scale depends on the reference source chosen for the definition of the magnitude system. Using absolute AB magnitudes, the zero point luminance of the CIE V(l photometric band is 10.96 x 104 cd·m-2.

  6. Expression of Herpes Simplex Virus 1 Glycoprotein B by a Recombinant Vaccinia Virus and Protection of Mice against Lethal Herpes Simplex Virus 1 Infection

    Science.gov (United States)

    Cantin, Edouard M.; Eberle, Richard; Baldick, Joseph L.; Moss, Bernard; Willey, Dru E.; Notkins, Abner L.; Openshaw, Harry

    1987-08-01

    The herpes simplex virus 1 (HSV-1) strain F gene encoding glycoprotein gB was isolated and modified at the 5' end by in vitro oligonucleotide-directed mutagenesis. The modified gB gene was inserted into the vaccinia virus genome and expressed under the control of a vaccinia virus promoter. The mature gB glycoprotein produced by the vaccinia virus recombinant was glycosylated, was expressed at the cell surface, and was indistinguishable from authentic HSV-1 gB in terms of electrophoretic mobility. Mice immunized intradermally with the recombinant vaccinia virus produced gB-specific neutralizing antibodies and were resistant to a lethal HSV-1 challenge.

  7. Critical phase for the antiferromagnetic Z(5) model on a square lattice

    International Nuclear Information System (INIS)

    Baltar, V.L.; Carneiro, G.M.; Pol, M.E.; Zagury, N.

    1983-04-01

    The existence of a critical phase for the antiferromagnetic Z(5) model on a square lattice is suggested based on results of Monte Carlo (MC) simulations and of Migdal Kadanoff Renormalization Group calculations (MKRG). The MKRG simulates a line of fixed points which it is interpreted as the locus of attraction of a critical phase. The MC simulations are compatible with this interpretation. (Author) [pt

  8. Physical investigation of square cylinder array dynamical response under single-phase cross-flow

    International Nuclear Information System (INIS)

    Longatte, E.; Baj, F.

    2014-01-01

    Fluid structure interaction and flow-induced vibration in square cylinder arrangement under single-phase incompressible laminar cross flow are investigated in the present paper. Dynamic instability governed by damping generation is studied without any consideration about mixing with turbulence effects. Conservative and non-conservative effects are pointed out and dynamical stability limit sensitivity to physical parameters is analyzed. Finally the influence of key physical parameters on fluid solid dynamics interaction is quantified. (authors)

  9. Analysis of elastic field in functionally graded material beams with square cross-section

    Science.gov (United States)

    Agrawal, Manish; Ahsan, Mohammad Al; Afsar Ali, Md.

    2017-12-01

    A square and simply supported functionally graded beam of medium thickness, subjected to a point load, has been investigated. Young's modulus of elasticity is assumed to vary following linear, exponential and power function along the thickness direction. Numerical Results show the variation of flexural stress and position of neutral axis with the change of the ratio of Young's modulus of elasticity of the top and bottom surfaces.

  10. Harder, Better, Faster, Stronger Convergence Rates for Least-Squares Regression

    OpenAIRE

    Dieuleveut, Aymeric; Flammarion, Nicolas; Bach, Francis

    2017-01-01

    International audience; We consider the optimization of a quadratic objective function whose gradients are only accessible through a stochastic oracle that returns the gradient at any given point plus a zero-mean finite variance random error. We present the first algorithm that achieves jointly the optimal prediction error rates for least-squares regression, both in terms of forgetting of initial conditions in O(1/n 2), and in terms of dependence on the noise and dimension d of the problem, a...

  11. Coupling parameter series expansion for fluid with square-well plus repulsive-square-barrier potential

    Directory of Open Access Journals (Sweden)

    Shiqi Zhou

    2013-10-01

    Full Text Available Monte Carlo simulations in the canonical ensemble are performed for fluid with potential consisting of a square-well plus a square-barrier to obtain thermodynamic properties such as pressure, excess energy, constant volume excess heat capacity, and excess chemical potential, and structural property such as radial distribution function. The simulations cover a wide density range for the fluid phase, several temperatures, and different combinations of the parameters defining the potential. These simulation data have been used to test performances of a coupling parameter series expansion (CPSE recently proposed by one of the authors [S. Zhou, Phys. Rev. E 74, 031119 (2006], and a traditional 2nd-order high temperature series expansion (HTSE based on a macroscopic compressibility approximation (MAC used with confidence since its introduction in 1967. It is found that (i the MCA-based 2nd-order HTSE unexpectedly and depressingly fails for most situations investigated, and the present simulation results can serve well as strict criteria for testing liquid state theories. (ii The CPSE perturbation scheme is shown to be capable of predicting very accurately most of the thermodynamic properties simulated, but the most appropriate level of truncating the CPSE differs and depends on the range of the potential to be calculated; in particular, the shorter the potential range is, the higher the most appropriate truncating level can be, and along with rising of the potential range the performance of the CPSE perturbation scheme will decrease at higher truncating level. (iii The CPSE perturbation scheme can calculate satisfactorily bulk fluid rdf, and such calculations can be done for all fluid states of the whole phase diagram. (iv The CPSE is a convergent series at higher temperatures, but show attribute of asymptotic series at lower temperatures, and as a result, the surest asymptotic value occurs at lower-order truncation.

  12. Gene expression of herpes simplex virus. II. Uv radiological analysis of viral transcription units

    International Nuclear Information System (INIS)

    Millette, R. L.; Klaiber, R.

    1980-01-01

    The transcriptional organization of the genome of herpes simplex virus type 1 was analyzed by measuring the sensitivity of viral polypeptide synthesis to uv irradiation of the infecting virus. Herpes simplex virus type 1 was irradiated with various doses of uv light and used to infect xeroderma pigmentosum fibroblasts. Immediate early transcription units were analyzed by having cycloheximide present throughout the period of infection, removing the drug at 8 h postinfection, and pulse-labeling proteins with [355]methionine. Delayed early transcription units were analyzed in similar studies by having 9-beta-D-arabinofuranosyladenine present during the experiment to block replication of the input irradiated genome. The results indicate that none of the immediate early genes analyzed can be cotranscribed, whereas some of the delayed early genes might be cotranscribed. No evidence was found for the existence of large, multigene transcription units

  13. Cross-reactivity between antigens of Anisakis simplex s.l. and other ascarid nematodes

    Directory of Open Access Journals (Sweden)

    Lozano Maldonado J.

    2004-06-01

    Full Text Available A study of the cross-reactivity among somatic and excretory-secretory antigens of the third stage larvae of Anisakis simplex s.l. and somatic antigens of other ascarid nematodes (Ascaris lumbricoides, A. suum, Toxocara canis, Anisakis physeteris, Hysterothylacium aduncum and H. fabri was carried out by immunoblotting. It was revealed a high degree of cross-reactivity among ascarids in the 30 and > 212 kDa range by using sera against somatic and excretory-secretory antigens of A. simplex s.l. It has been revealed also specific components of the Anisakis genus (< 7.2, 9, 19 and 25 kDa that will be interesting in diagnosis.

  14. Recurrent Labial Herpes Simplex in Pediatric Dentistry: Low-level Laser Therapy as a Treatment Option

    Science.gov (United States)

    Stona, Priscila; da Silva Viana, Elizabete; dos Santos Pires, Leandro; Blessmann Weber, João Batista

    2014-01-01

    ABSTRACT Recurrent labial herpes simplex is a pathology of viral origin that is frequently observed in children. The signs and symptoms are uncomfortable and, in many cases, the efficacy of treatment is unproven. However, several studies have demonstrated good results from the use of low-level laser therapy (LLLT), primarily due to acceleration of the healing process and pain relief, which make it a promising resource for use with this pathology. This paper describes a clinical case of a 7-year-old patient affected by this pathology and the therapeutic resolution proposed. How to cite this article: Stona P, da Silva Viana E, dos Santos Pires L, Weber JBB, Kramer PF. Recurrent Labial Herpes Simplex in Pediatric Dentistry: Low-level Laser Therapy as a Treatment Option. Int J Clin Pediatr Dent 2014;7(2):140-143. PMID:25356015

  15. Use of polymerase chain reaction for laboratory diagnosis of herpes simplex virus encephalitis.

    Science.gov (United States)

    Aslanzadeh, J; Garner, J G; Feder, H M; Ryan, R W

    1993-01-01

    Polymerase chain reaction was used to detect herpes simplex virus (HSV) specific deoxyribonucleic acid (DNA) sequences in acute and convalescent cerebrospinal fluid (CSF) and brain tissue of a 78-year-old man and in CSF of a neonate who died of complications owing to herpes simplex virus encephalitis (HSVE). Polymerase chain reaction (PCR) was carried out for 35 cycles with a set of primers that bracketed a 92 base pair segment unique to the HSV DNA polymerase gene. Amplified DNA was electrophoresed on 3 percent agarose gel, blotted onto a nylon membrane, and probed with 32p-labeled oligonucleotide internal to the primers. The HSV specific DNA sequences were detected in the specimens from both patients. No HSV specific DNA was detected in CSFs from 20 patients with suspected Lyme disease or neurosyphilis. Polymerase chain reaction is a rapid and noninvasive technique for the diagnosis of HSVE.

  16. Preparation of herpes simplex virus-infected primary neurons for transmission electron microscopy.

    Science.gov (United States)

    Miranda-Saksena, Monica; Boadle, Ross; Cunningham, Anthony L

    2014-01-01

    Transmission electron microscopy (TEM) provides the resolution necessary to identify both viruses and subcellular components of cells infected with many types of viruses, including herpes simplex virus. Recognized as a powerful tool in both diagnostic and research-based virology laboratories, TEM has made possible the identification of new viruses and has contributed to the elucidation of virus life cycle and virus-host cell interaction. Whilst there are many sample preparation techniques for TEM, conventional processing using chemical fixation and resin embedding remains a useful technique, available in virtually all EM laboratories, for studying virus/cell ultrastructure. In this chapter, we describe the preparation of herpes simplex virus-infected primary neurons, grown on plastic cover slips, to allow sectioning of neurons and axons in their growth plane. This technique allows TEM examination of cell bodies, axons, growth cones, and varicosities, providing powerful insights into virus-cell interaction.

  17. Cycloartenol triterpenoid saponins from Cimicifuga simplex (Ranunculaceae) and their biological effects.

    Science.gov (United States)

    Wu, Lun; Chen, Zhi-Li; Su, Yang; Wang, Qiu-Hong; Kuang, Hai-Xue

    2015-02-01

    The constituents of Cimicifuga plants have been extensively investigated, and the principal metabolites are 9,19-cyclolanostane triterpenoid glycosides, which are distributed widely in Cimicifuga plants, but not in other members of the Ranunculaceae family, and are considered to be characteristics of the Cimicifuga genus. This type of triterpenoid glycoside possesses several important biological activities. More than 120 cycloartane triterpene glycosides have been isolated from Cimicifuga simplex Wormsk. The aim of this review article is to summarize all the major findings based on the available scientific literatures on C. simplex, with a focus on the identified 9,19-cyclolanostane triterpenoid glycosides. Biological studies of cycloartane triterpene glycosides from Cimicifuga spp. are also discussed. Copyright © 2015 China Pharmaceutical University. Published by Elsevier B.V. All rights reserved.

  18. Assessment of methods for computing the closest point projection, penetration, and gap functions in contact searching problems

    Czech Academy of Sciences Publication Activity Database

    Kopačka, Ján; Gabriel, Dušan; Plešek, Jiří; Ulbin, M.

    2016-01-01

    Roč. 105, č. 11 (2016), s. 803-833 ISSN 0029-5981 R&D Projects: GA ČR(CZ) GAP101/12/2315; GA MŠk(CZ) ME10114 Institutional support: RVO:61388998 Keywords : closest point projection * local contact search * quadratic elements * Newtons methods * geometric iteration methods * simplex method Subject RIV: JC - Computer Hardware ; Software Impact factor: 2.162, year: 2016 http://onlinelibrary.wiley.com/doi/10.1002/nme.4994/abstract

  19. The square of a planar cubic graph is 7-colorable

    DEFF Research Database (Denmark)

    Thomassen, Carsten

    2017-01-01

    We prove the conjecture made by G. Wegner in 1977 that the square of every planar, cubic graph is 7-colorable. Here, 7 cannot be replaced by 6.......We prove the conjecture made by G. Wegner in 1977 that the square of every planar, cubic graph is 7-colorable. Here, 7 cannot be replaced by 6....

  20. Midpoint two- steps rule for the square root method | Uwamusi ...

    African Journals Online (AJOL)

    We present a method “Midpoint-Two-Steps rule” for the square root functional iteration for enclosing zeros of a polynomial. The method combines classical square root method in its formulation a variant of the approach adopted by (Wang and WU,1985) where a Gauss-Siedel updating formula was used to accelerate the ...

  1. Comparing Ranque tubes of circular and square cross section

    Directory of Open Access Journals (Sweden)

    Kabardin Ivan K.

    2017-01-01

    Full Text Available The efficiency of temperature end energy separation is compared for Ranque tubes of circular and square cross section, with the square side equal to the circle diameter. The “square” tube demonstrates approximately two times less efficiency, yet the separation effect still being evidently presented.

  2. On square-free edge colorings of graphs

    DEFF Research Database (Denmark)

    Barat, Janos; Varju, P.P.

    2008-01-01

    An edge coloring of a graph is called square-free, if the sequence of colors on certain walks is not a square, that is not of the form x(1,)...,x(m), x(1),...,x(m), for any m epsilon N. Recently, various classes of walks have been suggested to be considered in the above definition. We construct g...

  3. Comparision of the estimation of the least square and genetic ...

    African Journals Online (AJOL)

    This article aims at evaluating the functions existed in the R software which are employed for approximate solution in optimization. As a result, there has been produced least squares by usual methods for linear and non-linear models through genetic algorithm in this research. Keywords: Least Squares, Genetic Algorithm, ...

  4. On root mean square approximation by exponential functions

    OpenAIRE

    Sharipov, Ruslan

    2014-01-01

    The problem of root mean square approximation of a square integrable function by finite linear combinations of exponential functions is considered. It is subdivided into linear and nonlinear parts. The linear approximation problem is solved. Then the nonlinear problem is studied in some particular example.

  5. Space and protest : A tale of two Egyptian squares

    NARCIS (Netherlands)

    Mohamed, A.A.; Van Nes, A.; Salheen, M.A.

    2015-01-01

    Protests and revolts take place in public space. How they can be controlled or how protests develop depend on the physical layout of the built environment. This study reveals the relationship between urban space and protest for two Egyptian squares: Tahrir Square and Rabaa Al-Adawiya in Cairo. For

  6. Evaluation of three immunofluorescence assays for culture confirmation and typing of herpes simplex virus.

    OpenAIRE

    Lipson, S M; Schutzbank, T E; Szabo, K

    1987-01-01

    Three pairs of monoclonal antibodies, supplied in kits by Electro-Nucleonics, Inc. (ENI), The Syva Co., and Kallestad Laboratories, Inc. (KL), were evaluated for the laboratory confirmation and typing of herpes simplex virus (HSV). Of 108 coded HSV slide preparation, run in parallel with each monoclonal-antibody set, 103 were equivalent by the immunofluorescence assays. Among the five discordant isolates, three (2.8%) did not type with the KL monoclonal antibodies and two (1.9%) false-positiv...

  7. Evaluation of two immunofluorescence assays with monoclonal antibodies for typing of herpes simplex virus.

    OpenAIRE

    Swierkosz, E M; Arens, M Q; Schmidt, R R; Armstrong, T

    1985-01-01

    An indirect immunofluorescence assay and a direct immunofluorescence assay were evaluated for typing clinical isolates of herpes simplex virus (HSV). The indirect immunofluorescence assay (Electro-Nucleonics, Inc.) correctly identified 16 HSV type 2 (HSV-2) isolates, but failed to identify 4 of 14 HSV-1 isolates because of background fluorescence and instability of reagents. Forty-nine HSV-1 isolates were correctly typed by direct immunofluorescence assay (Kallestad Laboratories, Inc.), but 1...

  8. Latent Herpes Simplex Virus 1 Infection Does Not Induce Apoptosis in Human Trigeminal Ganglia

    OpenAIRE

    Himmelein, Susanne; Lindemann, Anja; Sinicina, Inga; Strupp, Michael; Brandt, Thomas; Hüfner, Katharina

    2015-01-01

    Herpes simplex virus 1 (HSV-1) can establish lifelong latency in human trigeminal ganglia. Latently infected ganglia contain CD8+ T cells, which secrete granzyme B and are thus capable of inducing neuronal apoptosis. Using immunohistochemistry and single-cell reverse transcription-quantitative PCR (RT-qPCR), higher frequency and transcript levels of caspase-3 were found in HSV-1-negative compared to HSV-1-positive ganglia and neurons, respectively. No terminal deoxynucleotidyltransferase-medi...

  9. Epidermodysplasia verruciformis with Hansen′s disease, herpes simplex labialis and multiple eccrine hidradenoma

    Directory of Open Access Journals (Sweden)

    Padmavathy L

    2009-01-01

    Full Text Available Epidermodysplasia verruciformis (EV - a rare, lifelong heritable disease due to a unique susceptibility to human papilloma virus. The disseminated verrucous lesions or pityriasis versicolor like lesions persist from early childhood and can transform into a cutaneous malignancy in a fourth of patients. The association of EV with multiple eccrine hidradenoma, herpes simplex labialis and Hansen′s disease is a very rare occurrence and is reported in a 25-year-old woman.

  10. The intelligence of dual simplex method to solve linear fractional fuzzy transportation problem.

    Science.gov (United States)

    Narayanamoorthy, S; Kalyani, S

    2015-01-01

    An approach is presented to solve a fuzzy transportation problem with linear fractional fuzzy objective function. In this proposed approach the fractional fuzzy transportation problem is decomposed into two linear fuzzy transportation problems. The optimal solution of the two linear fuzzy transportations is solved by dual simplex method and the optimal solution of the fractional fuzzy transportation problem is obtained. The proposed method is explained in detail with an example.

  11. Are Steroids a Beneficial Adjunctive Therapy in the Immunosuppressed Patient with Herpes Simplex Virus Encephalitis?

    Directory of Open Access Journals (Sweden)

    Karlo J. Lizarraga

    2013-03-01

    Full Text Available Few reports describe the reactivation of latent herpes simplex virus causing encephalitis (HSVE in patients undergoing brain radiation therapy and a concomitant steroid regimen. The role for steroid use in the treatment of patients with HSVE has not been fully elucidated. We report the case of a female patient immunosuppressed by steroids and brain radiation who developed HSVE and responded to acyclovir and dexamethasone.

  12. The relationship of graft survival and herpes simplex virus latency in recipient corneal buttons

    OpenAIRE

    Aydemir, Orhan; Türkçüoğlu, Peykan; Bulut, Yasemin; Kalkan, Ahmet

    2007-01-01

    Orhan Aydemir1, Peykan Türkçüoglu1, Yasemin Bulut2, Ahmet Kalkan31Firat University School of Medicine, Department of Ophthalmology, Elazig, Turkey; 2Firat University School of Medicine, Department of Microbiology, Elazig, Turkey; 3Firat University School of Medicine, Department of Infectious Diseases, Elazig, TurkeyPurpose: To demonstrate relationship between herpes simplex virus (HSV) corneal latency and graft survival.Methods: Prospective case control study. 28 ...

  13. Contributions of herpes simplex virus type 1 envelope proteins to entry by endocytosis

    Science.gov (United States)

    Herpes simplex virus (HSV) proteins specifically required for endocytic entry but not direct penetration have not been identified. HSVs deleted of gE, gG, gI, gJ, gM, UL45, or Us9 entered cells via either pH-dependent or pH-independent endocytosis and were inactivated by mildly acidic pH. Thus, the ...

  14. Repeated CT studies of a patient with herpes simplex encephalitis during his entire clinical course

    International Nuclear Information System (INIS)

    Shiraishi, Masahiro; Fukui, Keiji; Takeda, Sadanori; Sadamoto, Kazuhiko; Kimura, Hideki; Sakaki, Saburo.

    1985-01-01

    We encountered a patient with herpes simplex encephalitis whose cerebral lesions were studied by repeated CT scannings during his entire clinical course. The purpose of this paper is to report the earliest lesions of the brain as revealed by CT scans. A 63-year-old man was admitted to our clinic complaining of headache, nausea, fever, and disorientation. On admission, a physical examination showed a high fever, while a neurological examination revealed a stiff neck, a positive Kernig's sign, and disorientation. Laboratory examinations revealed a pleocytosis of the cerebrospinal fluid. Electroencephalograms showed the so-called ''periodic sharp-and-slow-waves complex''. The complement fixation titer for herpes simplex virus was x32 in the serum and x128 in the cerebrospinal fluid, suggesting the diagnosis of herpes simplex encephalitis. We treated him with adenine arabinoside and gamma-globulin, but the patient did not recover; rather, he died of pneumonia and gastrointestinal bleeding three months later. Plain CT scans taken on the 12th day after the onset revealed a low-density area with signs of a slight mass in the region from the right island of Reil to the right uncus. Contrast-enhanced CT scans revealed an irregular enhancement in the low-density area. CT scans taken on the 19th day after the onset showed an extensive low-density area with a streak-like enhancement in the right temporal lobe, which is in aggreement with the findings reported by others as characteristic CT findings for herpes simplex encephalitis. In order to make an early diagnosis of a patient, we should pay attention to a low-density area with an irregular contrast enhancement in the region from the island of Reil to the uncus on a CT scan. (author)

  15. Herpes Simplex Virus-1 DNA Primase: A Remarkably Inaccurate yet Selective Polymerase

    Czech Academy of Sciences Publication Activity Database

    Urban, M.; Joubert, Nicolas; Hocek, Michal; Alexander, R. E.; Kuchta, R. D.

    2009-01-01

    Roč. 48, č. 46 (2009), s. 10866-10881 ISSN 0006-2960 R&D Projects: GA MŠk LC512; GA AV ČR IAA400550902 Grant - others:NIH(US) AI059764 Institutional research plan: CEZ:AV0Z40550506 Keywords : HSV-1 * herpes simplex virus-1 * Pyr * pyrimidine Subject RIV: CC - Organic Chemistry Impact factor: 3.226, year: 2009

  16. Relation of arginine-lysine antagonism to herpes simplex growth in tissue culture.

    Science.gov (United States)

    Griffith, R S; DeLong, D C; Nelson, J D

    1981-01-01

    In the studies conducted, arginine deficiency suppressed herpes simplex virus replication in tissue culture. Lysine, an analog of arginine, as an antimetabolite, antagonized the viral growth-promoting action of arginine. The in vitro data may be the basis for the observation that patients prone to herpetic lesions and other related viral infections, particularly during periods of stress, should abstain from arginine excess and may also require supplemental lysine in their diet.

  17. Comparative studies of types 1 and 2 herpes simplex virus infection of cultured normal keratinocytes.

    OpenAIRE

    Su, S J; Wu, H H; Lin, Y H; Lin, H Y

    1995-01-01

    AIMS--To investigate the differences in biological properties, multiplication patterns, and cytopathic effects between type 1 and type 2 herpes simplex virus (HSV) through the replication of HSV in cultured normal human keratinocytes. METHODS--Keratinocytes were obtained from surgical specimens of normal gingiva, cervix, trunk skin, and newborn foreskin. They were cultured in serum free, chemically defined, culture medium and infected with a pool of HSV collected from clinical specimens. RESU...

  18. Immunobiology of herpes simplex virus and cytomegalovirus infections of the fetus and newborn

    OpenAIRE

    Muller, William J.; Jones, Cheryl A.; Koelle, David M.

    2010-01-01

    Immunologic “immaturity” is often blamed for the increased susceptibility of newborn humans to infection, but the precise mechanisms and details of immunologic development remain somewhat obscure. Herpes simplex virus (HSV) and cytomegalovirus (CMV) are two of the more common severe infectious agents of the fetal and newborn periods. HSV infection in the newborn most commonly occurs after exposure to the virus during delivery, and can lead to a spectrum of clinical disease ranging from isolat...

  19. Pharmacokinetics and Safety of Famciclovir in Children with Herpes Simplex or Varicella-Zoster Virus Infection▿

    OpenAIRE

    Sáez-Llorens, X.; Yogev, R.; Arguedas, A.; Rodriguez, A.; Spigarelli, M. G.; De León Castrejón, T.; Bomgaars, L.; Roberts, M.; Abrams, B.; Zhou, W.; Looby, M.; Kaiser, G.; Hamed, K.

    2009-01-01

    Two multicenter, open-label, single-arm, two-phase studies evaluated single-dose pharmacokinetics and single- and multiple-dose safety of a pediatric oral famciclovir formulation (prodrug of penciclovir) in children aged 1 to 12 years with suspicion or evidence of herpes simplex virus (HSV) or varicella-zoster virus (VZV) infection. Pooled pharmacokinetic data were generated after single doses in 51 participants (∼12.5 mg/kg of body weight [BW] for children weighing

  20. Phenolic constituents of the aerial parts of Cimicifuga simplex and Cimicifuga japonica.

    Science.gov (United States)

    Iwanaga, Atsufumi; Kusano, Genjiro; Warashina, Tsutomu; Miyase, Toshio

    2010-04-23

    Chemical investigation of the aerial parts of Cimicifuga simplex afforded four new fukinolic acid analogues, cimicifugic acids K-N (1-4), and 10 known compounds, and C. japonica afforded three new fukinolic acid analogues, cimicifugic acids K-M (1-3), a new phenolic glycoside, shomaside F (5), and 10 known compounds. Cimicifugic acids K-N showed more potent hyaluronidase inhibitory activities than rosmarinic acid.

  1. Seroprevalence of herpes simplex virus type 1 and type 2 in Turkey.

    Science.gov (United States)

    Dolar, N; Serdaroglu, S; Yilmaz, G; Ergin, S

    2006-11-01

    Herpes simplex virus (HSV) infections are among the most common infectious diseases in humans. The prevalence of herpes simplex viruses type 1 (HSV-1) and type 2 (HSV-2) varies widely across the world. HSV-2 infection is the primary cause of genital herpes. It is highly prevalent in human populations in many parts of the world, and is the most common cause of genital ulcer disease worldwide. In spite of the large prevalence and growing incidence of herpes simplex infection (HSV-1 and HSV-2), relatively few data have been published regarding the seroprevalence of herpes simplex infection, while no data exist regarding the Turkish population. We aimed to investigate the prevalence of HSV-1 and HSV-2 in selected populations in Turkey. A cross-sectional study was conducted involving 2082 serum samples of 725 adults, 300 pregnant women, 200 blood donors, 483 sex workers and 110 patients with genital warts and 264 hotel staff in Istanbul, Turkey. All serum samples were assessed for HSV1 and HSV-2 IgG antibodies using an HSV-type specific, enzyme-linked immunosorbent assay (ELISA). The prevalence of HSV-2 and HSV-1 antibodies was 4.8 and 85.3% in sexually active adults; 5.5 and 96% in blood donors; 5 and 98% in pregnant women, 17.3 and 93.6% in patients with genital warts; 8.3 and 97.3% in hotel staff; and 60% and 99% in sex workers. These results confirm a higher prevalence of HSV infection than estimated, especially in high risk groups in Turkey. The high prevalence of HSV infection underlines the need for education among these populations.

  2. Herpes Simplex Virus Type 1 Renders Infected Cells Resistant to Cytotoxic T-Lymphocyte-Induced Apoptosis

    OpenAIRE

    Jerome, Keith R.; Tait, Jonathan F.; Koelle, David M.; Corey, Lawrence

    1998-01-01

    Many viruses interfere with apoptosis of infected cells, presumably preventing cellular apoptosis as a direct response to viral infection. Since cytotoxic T lymphocytes (CTL) induce apoptosis of infected cells as part of the “lethal hit,” inhibition of apoptosis could represent an effective immune evasion strategy. We report here herpes simplex virus type 1 (HSV-1) interference with CTL-induced apoptosis of infected cells and show that HSV-1 inhibits the nuclear manifestations of apoptosis bu...

  3. Measuring the Hall weighting function for square and cloverleaf geometries

    Science.gov (United States)

    Scherschligt, Julia K.; Koon, Daniel W.

    2000-02-01

    We have directly measured the Hall weighting function—the sensitivity of a four-wire Hall measurement to the position of macroscopic inhomogeneities in Hall angle—for both a square shaped and a cloverleaf specimen. Comparison with the measured resistivity weighting function for a square geometry [D. W. Koon and W. K. Chan, Rev. Sci. Instrum. 69, 12 (1998)] proves that the two measurements sample the same specimen differently. For Hall measurements on both a square and a cloverleaf, the function is nonnegative with its maximum in the center and its minimum of zero at the edges of the square. Converting a square into a cloverleaf is shown to dramatically focus the measurement process onto a much smaller portion of the specimen. While our results agree qualitatively with theory, details are washed out, owing to the finite size of the magnetic probe used.

  4. Address Points - Allegheny County Address Points 201601

    Data.gov (United States)

    NSGIC Education | GIS Inventory — This dataset contains Address Points in Allegheny County. The Address Points were created by GDR for the Allegheny County CAD project, October 2008. Data is updated...

  5. A case of herpes simplex encephalitis(HSE) with a thalamic lesion

    International Nuclear Information System (INIS)

    Fujimori, Katsuya; Koike, Ryoko; Yuasa, Tatsuhiko; Miyatake, Tadashi; Ito, Jusuke.

    1987-01-01

    A case of herpes simplex encephalitis (HSE) with thalamic involvement was reported. The patient, a 27-year-old man, was admitted because of abnormal behavior and fever. He exhibited a disturbance of consciousness, meningial signs, and hyperreflexia. A CT scan of the head revealed diffuse brain edema. Acute encephalitis, especially HSE, was suspected, and so the intravenous administration of acyclovir and steroid therapy were started. The titer of herpes simplex Type 1 virus, as measured by CF and ELISA, was found to have increased amounts of serum and cerebrospinal fluid. 5 days after the onset, his consciousness worsened. He could not tell his name and scarely opened his eyes upon pain stimulation. A CT scan at this time showed low-density lesions in the left thalamus, cingulate gyrus, and the posterior portion of the putamen. About 5 days later, his consciousness level was increased, but he was mute. This symptom was thought to be thalamic aphasia, which might be correlative with the low-density lesions shown in the left thalamus by the CT scan. About 30 days after the onset of the disease, his speech became normal, and a CT scan at 51 hospital days showed no abnormality. The etiology of low-density lesions of the left thalamus in the CT scan is speculated to be as follows: firstly, vascular damage of circulation disturbance, and secondly a special affinity of herpes simplex Type 1 virus to the thalamus. (author)

  6. Chemical composition of Propolis Extract ACF® and activity against herpes simplex virus.

    Science.gov (United States)

    Bankova, V; Galabov, A S; Antonova, D; Vilhelmova, N; Di Perri, B

    2014-09-25

    Propolis Extract ACF(®) (PPE) is a purified extract manufactured from propolis collected in a Canadian region rich in poplar trees, and it is the active substance of a topical ointment used against herpes labialis (cold sores or fever blisters). Aim of this study was to analyze the chemical composition of PPE in order to understand the plant origin and possible relations between compounds and antiviral activity, and to characterize the antiviral activity of the extract against herpes simplex virus in vitro. The analysis of the propolis extract samples was conducted by Gas Chromatography-Mass Spectrometry (GC-MS). The antiviral activity was tested against herpes simplex viruses type 1 and type 2 in MDBK cell cultures by treating the cells with PPE at the time of virus adsorption, and by incubating the virus with the extract before infection (virucidal assay). Results from the GC-MS analyses revealed a dual plant origin of PPE, with components derived from resins of two different species of poplar. The chemical composition appeared standardized between extract samples and was also reproduced in the sample of topical ointment. The antiviral studies showed that PPE had a pronounced virucidal effect against herpes simplex viruses type 1 and type 2, and also interfered with virus adsorption. Copyright © 2014 Elsevier GmbH. All rights reserved.

  7. Strong Tracking Spherical Simplex-Radial Cubature Kalman Filter for Maneuvering Target Tracking.

    Science.gov (United States)

    Liu, Hua; Wu, Wen

    2017-03-31

    Conventional spherical simplex-radial cubature Kalman filter (SSRCKF) for maneuvering target tracking may decline in accuracy and even diverge when a target makes abrupt state changes. To overcome this problem, a novel algorithm named strong tracking spherical simplex-radial cubature Kalman filter (STSSRCKF) is proposed in this paper. The proposed algorithm uses the spherical simplex-radial (SSR) rule to obtain a higher accuracy than cubature Kalman filter (CKF) algorithm. Meanwhile, by introducing strong tracking filter (STF) into SSRCKF and modifying the predicted states' error covariance with a time-varying fading factor, the gain matrix is adjusted on line so that the robustness of the filter and the capability of dealing with uncertainty factors is improved. In this way, the proposed algorithm has the advantages of both STF's strong robustness and SSRCKF's high accuracy. Finally, a maneuvering target tracking problem with abrupt state changes is used to test the performance of the proposed filter. Simulation results show that the STSSRCKF algorithm can get better estimation accuracy and greater robustness for maneuvering target tracking.

  8. Herpes Simplex Vaccines: Prospects of Live-attenuated HSV Vaccines to Combat Genital and Ocular infections

    Science.gov (United States)

    Stanfield, Brent; Kousoulas, Konstantin Gus

    2015-01-01

    Herpes simplex virus type-1 (HSV-1) and its closely related type-2 (HSV-2) viruses cause important clinical manifestations in humans including acute ocular disease and genital infections. These viruses establish latency in the trigeminal ganglionic and dorsal root neurons, respectively. Both viruses are widespread among humans and can frequently reactivate from latency causing disease. Currently, there are no vaccines available against herpes simplex viral infections. However, a number of promising vaccine approaches are being explored in pre-clinical investigations with few progressing to early phase clinical trials. Consensus research findings suggest that robust humoral and cellular immune responses may partially control the frequency of reactivation episodes and reduce clinical symptoms. Live-attenuated viral vaccines have long been considered as a viable option for generating robust and protective immune responses against viral pathogens. Varicella zoster virus (VZV) belongs to the same alphaherpesvirus subfamily with herpes simplex viruses. A live-attenuated VZV vaccine has been extensively used in a prophylactic and therapeutic approach to combat primary and recurrent VZV infection indicating that a similar vaccine approach may be feasible for HSVs. In this review, we summarize pre-clinical approaches to HSV vaccine development and current efforts to test certain vaccine approaches in human clinical trials. Also, we discuss the potential advantages of using a safe, live-attenuated HSV-1 vaccine strain to protect against both HSV-1 and HSV-2 infections. PMID:27114893

  9. Validity of the coding for herpes simplex encephalitis in the Danish National Patient Registry

    DEFF Research Database (Denmark)

    Jørgensen, Laura Krogh; Dalgaard, Lars Skov; Østergaard, Lars Jørgen

    2016-01-01

    BACKGROUND: Large health care databases are a valuable source of infectious disease epidemiology if diagnoses are valid. The aim of this study was to investigate the accuracy of the recorded diagnosis coding of herpes simplex encephalitis (HSE) in the Danish National Patient Registry (DNPR...... (7.3%) as probable cases providing an overall PPV of 58.0% (95% confidence interval [CI]: 53.0-62.9). For "Encephalitis due to herpes simplex virus" (ICD-10 code B00.4), the PPV was 56.6% (95% CI: 51.1-62.0). Similarly, the PPV for "Meningoencephalitis due to herpes simplex virus" (ICD-10 code B00.4A......) was 56.8% (95% CI: 39.5-72.9). "Herpes viral encephalitis" (ICD-10 code G05.1E) had a PPV of 75.9% (95% CI: 56.5-89.7), thereby representing the highest PPV. The estimated sensitivity was 95.5%. CONCLUSION: The PPVs of the ICD-10 diagnosis coding for adult HSE in the DNPR were relatively low. Hence...

  10. Lichen Simplex Chronicus as an Essential Part of the Dermatologic Masquerade

    Directory of Open Access Journals (Sweden)

    Cristiana Voicu

    2017-07-01

    Full Text Available A 48 years old female patient had been suffering from the lesions presented  for four years. They have started as small, pruritic patches which had been mechanically irritated and grew up in time. The patient had no associated comorbidities or allergies, and she was not under any medication. On physical examination, she presented one erythematous, exudative plaque, with dimensions of 2.5/4 cm, located on the proximal phalanx and interphalangeal articulation of the left thumb. All histopathological  features were consistent with the diagnosis of lichen simplex chronicus. Some lesions of lichen simplex chronicus exhibit signs of pseudocarcinomatous, infundibular and sometimes eccrine ductal proliferation of keratinocytes. Although the pseudoinfiltrative aspect of the epithelial proliferation and its pronounced degree might mimic a well-differentiated lesion of squamous cell carcinoma, a lack of cellular atypia and atypical mitotic figures are features that do not support this diagnosis. On the other hand, long lasting lesions of lichen simplex chronicus may lead to alterations in the processes of keratinocyte proliferation and differentiation and eventually give rise to malignant transformation. The best treatment management is a psychodermatological approach, a combination of skin care with psychotherapy, in order to prevent relapses.

  11. Defining nervous system susceptibility during acute and latent herpes simplex virus-1 infection.

    Science.gov (United States)

    Menendez, Chandra M; Carr, Daniel J J

    2017-07-15

    Herpes simplex viruses are neurotropic human pathogens that infect and establish latency in peripheral sensory neurons of the host. Herpes Simplex Virus-1 (HSV-1) readily infects the facial mucosa that can result in the establishment of a latent infection in the sensory neurons of the trigeminal ganglia (TG). From latency, HSV-1 can reactivate and cause peripheral pathology following anterograde trafficking from sensory neurons. Under rare circumstances, HSV-1 can migrate into the central nervous system (CNS) and cause Herpes Simplex Encephalitis (HSE), a devastating disease of the CNS. It is unclear whether HSE is the result of viral reactivation within the TG, from direct primary infection of the olfactory mucosa, or from other infected CNS neurons. Areas of the brain that are susceptible to HSV-1 during acute infection are ill-defined. Furthermore, whether the CNS is a true reservoir of viral latency following clearance of virus during acute infection is unknown. In this context, this review will identify sites within the brain that are susceptible to acute infection and harbor latent virus. In addition, we will also address findings of HSV-1 lytic gene expression during latency and comment on the pathophysiological consequences HSV-1 infection may have on long-term neurologic performance in animal models and humans. Copyright © 2017 Elsevier B.V. All rights reserved.

  12. Vaccinia Virus Recombinant Expressing Herpes Simplex Virus Type 1 Glycoprotein D Prevents Latent Herpes in Mice

    Science.gov (United States)

    Cremer, Kenneth J.; Mackett, Michael; Wohlenberg, Charles; Notkins, Abner Louis; Moss, Bernard

    1985-05-01

    In humans, herpes simplex virus causes a primary infection and then often a latent ganglionic infection that persists for life. Because these latent infections can recur periodically, vaccines are needed that can protect against both primary and latent herpes simplex infections. Infectious vaccinia virus recombinants that contain the herpes simplex virus type 1 (HSV-1) glycoprotein D gene under control of defined early or late vaccinia virus promoters were constructed. Tissue culture cells infected with these recombinant viruses synthesized a glycosylated protein that had the same mass (60,000 daltons) as the glycoprotein D produced by HSV-1. Immunization of mice with one of these recombinant viruses by intradermal, subcutaneous, or intraperitoneal routes resulted in the production of antibodies that neutralized HSV-1 and protected the mice against subsequent lethal challenge with HSV-1 or HSV-2. Immunization with the recombinant virus also protected the majority of the mice against the development of a latent HSV-1 infection of the trigeminal ganglia. This is the first demonstration that a genetically engineered vaccine can prevent the development of latency.

  13. Herpes simplex virus type 1 in peptic ulcer disease: An inverse association with Helicobacter pylori

    Science.gov (United States)

    Tsamakidis, Klisthenis; Panotopoulou, Efstathia; Dimitroulopoulos, Dimitrios; Xinopoulos, Dimitrios; Christodoulou, Maria; Papadokostopoulou, Alexandra; Karagiannis, Ioannis; Kouroumalis, Elias; Paraskevas, Emmanuel

    2005-01-01

    AIM: To assess the frequency of herpes simplex virus type I in upper gastrointestinal tract ulcers and normal mucosa with the modern and better assays and also with a larger number of well characterized patients and controls and its relationship to Helicobacter pylori(H pylori). METHODS: Biopsy specimens from 90 patients (34 with gastric ulcer of the prepyloric area and 56 with duodenal ulcer) were evaluated. Biopsies from 50 patients with endoscopically healthy mucosa were considered as the control group. The method used to identify herpes simplex virus-1 (HSV-1) was polymerase chain reaction. H pylori was detected by the CLO-test and by histological method. RESULTS: Herpes simplex virus-1 was detected in 28 of 90 patients with peptic ulcer (31%) [11 of 34 patients with gastric ulcer (32.4%) and 17 of 56 with duodenal ulcer (30.4%)] exclusively close to the ulcerous lesion. All control group samples were negative for HSV-1. The likelihood of H pylori negativity among peptic ulcer patients was significantly higher in HSV-1 positive cases than in HSV-1 negative cases (P = 0.009). Gastric ulcer patients with HSV-1 positivity were strongly associated with an increased possibility of Helicobacter pylori negativity compared to duodenal ulcer patients (P = 0.010). CONCLUSION: HSV-1 is frequent in upper gastro-intestinal tract ulcers but not in normal gastric and duodenal mucosa. There is an inverse association between HSV-1 and H pylori infection. PMID:16425358

  14. Diagnosis of Herpes Simplex Encephalitis by ELISA Using Antipeptide Antibodies Against Type-Common Epitopes of Glycoprotein B of Herpes Simplex Viruses.

    Science.gov (United States)

    Bhullar, Shradha S; Chandak, Nitin H; Baheti, Neeraj N; Purohit, Hemant J; Taori, Girdhar M; Daginawala, Hatim F; Kashyap, Rajpal S

    2016-01-01

    Herpes simplex encephalitis (HSE) represents one of the most severe infectious diseases of the central nervous system (CNS). As effective antiviral drugs are available, an early, rapid, and reliable diagnosis has become important. The objective of this article was to develop a sensitive ELISA protocol for herpes simplex viruses (HSV) antigen detection and quantitation by assessing the usefulness of antipeptide antibodies against potential peptides of HSV glycoprotein B (gB). A total of 180 cerebrospinal fluid (CSF) samples of HSE and non-HSE patients were analyzed using a panel of antipeptide antibodies against synthetic peptides of HSV glycoprotein gB. The cases of confirmed and suspected HSE showed 80% and 51% positivity for antipeptide against synthetic peptide QLHDLRF and 77% and 53% positivity for antipeptide against synthetic peptide MKALYPLTT, respectively for the detection of HSV antigen in CSF. The concentration of HSV antigen was found to be higher in confirmed HSE as compared to suspected HSE group and the viral load correlated well with antigen concentration obtained using the two antipeptides in CSF of confirmed HSE group. This is the first article describing the use of antibodies obtained against synthetic peptides derived from HSV in diagnostics of HSE using patients' CSF samples.

  15. Precision of Points Computed from Intersections of Lines or Planes

    DEFF Research Database (Denmark)

    Cederholm, Jens Peter

    2004-01-01

    Not all points are directly accessible when doing detail surveys wirh GPS. This paper gests a method for estimating these points. The points are computed from intersections of lines that are surveyed with GPS. The lines are computed by least squares estimation. Further, the suggested method...... estimates the precision of the points. When using laser scanning a similar problem appears. A laser scanner captures a 3-D point cloud, not the points of real interest. The suggested method can be used to compute three-dimensional coordinates of the intersection of three planes estimated from the point...

  16. The consistency of ordinary least-squares and generalized least-squares polynomial regression on characterizing the mechanomyographic amplitude versus torque relationship

    International Nuclear Information System (INIS)

    Herda, Trent J; Ryan, Eric D; Costa, Pablo B; DeFreitas, Jason M; Walter, Ashley A; Stout, Jeffrey R; Beck, Travis W; Cramer, Joel T; Housh, Terry J; Weir, Joseph P

    2009-01-01

    The primary purpose of this study was to examine the consistency of ordinary least-squares (OLS) and generalized least-squares (GLS) polynomial regression analyses utilizing linear, quadratic and cubic models on either five or ten data points that characterize the mechanomyographic amplitude (MMG RMS ) versus isometric torque relationship. The secondary purpose was to examine the consistency of OLS and GLS polynomial regression utilizing only linear and quadratic models (excluding cubic responses) on either ten or five data points. Eighteen participants (mean ± SD age = 24 ± 4 yr) completed ten randomly ordered isometric step muscle actions from 5% to 95% of the maximal voluntary contraction (MVC) of the right leg extensors during three separate trials. MMG RMS was recorded from the vastus lateralis during the MVCs and each submaximal muscle action. MMG RMS versus torque relationships were analyzed on a subject-by-subject basis using OLS and GLS polynomial regression. When using ten data points, only 33% and 27% of the subjects were fitted with the same model (utilizing linear, quadratic and cubic models) across all three trials for OLS and GLS, respectively. After eliminating the cubic model, there was an increase to 55% of the subjects being fitted with the same model across all trials for both OLS and GLS regression. Using only five data points (instead of ten data points), 55% of the subjects were fitted with the same model across all trials for OLS and GLS regression. Overall, OLS and GLS polynomial regression models were only able to consistently describe the torque-related patterns of response for MMG RMS in 27–55% of the subjects across three trials. Future studies should examine alternative methods for improving the consistency and reliability of the patterns of response for the MMG RMS versus isometric torque relationship

  17. Spectrum unfolding by the least-squares methods

    International Nuclear Information System (INIS)

    Perey, F.G.

    1977-01-01

    The method of least squares is briefly reviewed, and the conditions under which it may be used are stated. From this analysis, a least-squares approach to the solution of the dosimetry neutron spectrum unfolding problem is introduced. The mathematical solution to this least-squares problem is derived from the general solution. The existence of this solution is analyzed in some detail. A chi 2 -test is derived for the consistency of the input data which does not require the solution to be obtained first. The fact that the problem is technically nonlinear, but should be treated in general as a linear one, is argued. Therefore, the solution should not be obtained by iteration. Two interpretations are made for the solution of the code STAY'SL, which solves this least-squares problem. The relationship of the solution to this least-squares problem to those obtained currently by other methods of solving the dosimetry neutron spectrum unfolding problem is extensively discussed. It is shown that the least-squares method does not require more input information than would be needed by current methods in order to estimate the uncertainties in their solutions. From this discussion it is concluded that the proposed least-squares method does provide the best complete solution, with uncertainties, to the problem as it is understood now. Finally, some implications of this method are mentioned regarding future work required in order to exploit its potential fully

  18. A survey of various enhancement techniques for square rings antennas

    Science.gov (United States)

    Mumin, Abdul Rashid O.; Alias, Rozlan; Abdullah, Jiwa; Abdulhasan, Raed Abdulkareem; Ali, Jawad; Dahlan, Samsul Haimi; Awaleh, Abdisamad A.

    2017-09-01

    The square ring shape becomes a famous reconfiguration on antenna design. The researchers have been developed the square ring by different configurations. It has high efficiency and simple calculation method. The performance enhancement for an antenna is the main reason to use this setting. Furthermore, the multi-objectives for the antenna also are considered. In this paper, different studies of square ring shape are discussed. This shape is developed in five different techniques, which are the gain enhancement, dual band antenna, reconfigurable antenna, CSRR, and circularly polarization. Moreover, the validation between these configurations also demonstrates for square ring shapes. In particular, the square ring slot improved the gain by 4.3 dB, provide dual band resonance at 1.4 and 2.6 GHz while circular polarization at 1.54 GHz, and multi-mode antenna. However, square ring strip achieved an excellent band rejection on UWB antenna at 5.5 GHz. The square ring slot length is the most influential factor on the antenna performance, which refers to the free space wavelength. Finally, comparisons between these techniques are presented.

  19. Constructing Geometric Properties of Rectangle, Square, and Triangle in the Third Grade of Indonesian Primary Schools

    Directory of Open Access Journals (Sweden)

    Ilham Rizkianto

    2013-07-01

    Full Text Available Previous studies have provided that when learning shapes for the first time, young children tend to use the prototype as the reference point for comparisons, but often fail when doing so since they do not yet think about the defining attributes or the geometric properties of the shapes. Most of the time, elementary students learn geometric properties of shapes only as empty verbal statements to be memorized, without any chance to experience the contepts meaningfully. In the light of it, a sequence of instructional activities along with computer manipulative was designed to support Indonesian third graders in constructing geometric properties of square, rectangle, and triangle. The aim of the present study is to develop a loval instructional theory to support third graders in constructing geometric properties of rectangle, square, and triangle. Thirty seven students of one third grade classes in SD Pupuk Sriwijaya Palembang, along with their class teacher, were involved in the study. Our findings suggest that the combination of computer and non-computer activities suppots third graders in constructing geometric properties of square, rectangle, and triangle in that it provides opportunities to the students to experience and to develop the concepts meaningfully while using their real experiences as the bases to attain a higher geometric thinking level.Key concepts: Geometric properties, rectangle, square, triangle, design research, realistic mathematics education DOI: http://dx.doi.org/10.22342/jme.4.2.414.160-171

  20. Source Localization using Stochastic Approximation and Least Squares Methods

    International Nuclear Information System (INIS)

    Sahyoun, Samir S.; Djouadi, Seddik M.; Qi, Hairong; Drira, Anis

    2009-01-01

    This paper presents two approaches to locate the source of a chemical plume; Nonlinear Least Squares and Stochastic Approximation (SA) algorithms. Concentration levels of the chemical measured by special sensors are used to locate this source. Non-linear Least Squares technique is applied at different noise levels and compared with the localization using SA. For a noise corrupted data collected from a distributed set of chemical sensors, we show that SA methods are more efficient than Least Squares method. SA methods are often better at coping with noisy input information than other search methods.

  1. Radix-16 Combined Division and Square Root Unit

    DEFF Research Database (Denmark)

    Nannarelli, Alberto

    2011-01-01

    Division and square root, based on the digitrecurrence algorithm, can be implemented in a combined unit. Several implementations of combined division/square root units have been presented mostly for radices 2 and 4. Here, we present a combined radix-16 unit obtained by overlapping two radix-4...... result digit selection functions, as it is normally done for division only units. The latency of the unit is reduced by retiming and low power methods are applied as well. The proposed unit is compared to a radix-4 combined division/square root unit, and to a radix-16 unit, obtained by cascading two...

  2. Powers of a product of commutators as products of squares

    Directory of Open Access Journals (Sweden)

    Alireza Abdollahi

    2004-01-01

    Full Text Available We prove that for any odd integer N and any integer n>0, the Nth power of a product of n commutators in a nonabelian free group of countable infinite rank can be expressed as a product of squares of 2n+1 elements and, for all such odd N and integers n, there are commutators for which the number 2n+1 of squares is the minimum number such that the Nth power of its product can be written as a product of squares. This generalizes a recent result of Akhavan-Malayeri.

  3. Squaring the Circle: Attempting Peace in Northern Ireland

    National Research Council Canada - National Science Library

    Marchi, Gina

    1997-01-01

    Finding a political framework for self-government in Northern Ireland that will be supported by both nationalists and unionists is referred to as a modern day attempt to do the impossible-to 'square the circle...

  4. Improved linear least squares estimation using bounded data uncertainty

    KAUST Repository

    Ballal, Tarig

    2015-04-01

    This paper addresses the problemof linear least squares (LS) estimation of a vector x from linearly related observations. In spite of being unbiased, the original LS estimator suffers from high mean squared error, especially at low signal-to-noise ratios. The mean squared error (MSE) of the LS estimator can be improved by introducing some form of regularization based on certain constraints. We propose an improved LS (ILS) estimator that approximately minimizes the MSE, without imposing any constraints. To achieve this, we allow for perturbation in the measurement matrix. Then we utilize a bounded data uncertainty (BDU) framework to derive a simple iterative procedure to estimate the regularization parameter. Numerical results demonstrate that the proposed BDU-ILS estimator is superior to the original LS estimator, and it converges to the best linear estimator, the linear-minimum-mean-squared error estimator (LMMSE), when the elements of x are statistically white.

  5. Square wave voltametric method for the trace metal analysis

    International Nuclear Information System (INIS)

    Viqar-un-Nisa; Ahmed, R.; Mohammand, M.

    1998-01-01

    Voltammetry is one of the most sensitive and cheaper analytical technique for the analysis of toxic metals, particularly at low levels and in water systems. Different pulse voltametry is relatively slow analytical technique, whereas square wave voltametry is faster. Thus the number of samples analysed can be appreciably increased by using square wave voltametry. Extensive studies were carried out to optimized the square wave voltametric method for trace analysis. Pulse amplitudes and scan rates were varied to find out most sensitive and reliable conditions. Comparative studies were performed to evaluate differential pulse and square wave voltametry. Advantages and disadvantages of both the techniques are discussed for trace analysis of heavy and toxic metals like lead, cadmium, copper and zinc. Effects of scan rates and pulse amplitude are discussed on the optimization of the technique for trace metals analysis. Effects of background electrolyte concentration were also studied. After optimizing the voltametric methods many environmental samples were also analysed. (author)

  6. Q-Squared: Combining Qualitative and Quantitative Approaches in ...

    International Development Research Centre (IDRC) Digital Library (Canada)

    2013-07-24

    Jul 24, 2013 ... In Q-Squared: Combining Qualitative and Quantitative Approaches in Poverty Analysis, author Paul Shaffer examines the underlying assumptions and implications of how we conceptualize and investigate poverty.

  7. A Newton Algorithm for Multivariate Total Least Squares Problems

    Directory of Open Access Journals (Sweden)

    WANG Leyang

    2016-04-01

    Full Text Available In order to improve calculation efficiency of parameter estimation, an algorithm for multivariate weighted total least squares adjustment based on Newton method is derived. The relationship between the solution of this algorithm and that of multivariate weighted total least squares adjustment based on Lagrange multipliers method is analyzed. According to propagation of cofactor, 16 computational formulae of cofactor matrices of multivariate total least squares adjustment are also listed. The new algorithm could solve adjustment problems containing correlation between observation matrix and coefficient matrix. And it can also deal with their stochastic elements and deterministic elements with only one cofactor matrix. The results illustrate that the Newton algorithm for multivariate total least squares problems could be practiced and have higher convergence rate.

  8. Chi-square test and its application in hypothesis testing

    Directory of Open Access Journals (Sweden)

    Rakesh Rana

    2015-01-01

    Full Text Available In medical research, there are studies which often collect data on categorical variables that can be summarized as a series of counts. These counts are commonly arranged in a tabular format known as a contingency table. The chi-square test statistic can be used to evaluate whether there is an association between the rows and columns in a contingency table. More specifically, this statistic can be used to determine whether there is any difference between the study groups in the proportions of the risk factor of interest. Chi-square test and the logic of hypothesis testing were developed by Karl Pearson. This article describes in detail what is a chi-square test, on which type of data it is used, the assumptions associated with its application, how to manually calculate it and how to make use of an online calculator for calculating the Chi-square statistics and its associated P-value.

  9. [The Spanish Society of Paediatric Infectious Diseases guidelines on the prevention, diagnosis and treatment of neonatal herpes simplex infections].

    Science.gov (United States)

    2018-02-13

    Neonatal herpes simplex virus infections are rare, but are associated with significant morbidity and mortality. Most newborns acquire herpes simplex virus infection in the peripartum period. For peripartum transmission to occur, women must be shedding the virus in their genital tracts symptomatically or asymptomatically around the time of delivery. There are evidence-based interventions in pregnancy to prevent the transmission to the newborn. Caesarean section should be performed in the presence of herpetic lesions, and antiviral prophylaxis in the last weeks of pregnancy is recommended to suppress genital tract herpes simplex virus at the time of delivery. The diagnosis and early treatment of neonatal herpes simplex virus infections require a high index of suspicion, especially in the absence of skin lesions. It is recommended to rule out herpes simplex virus infections in those newborns with mucocutaneous lesions, central nervous system involvement, or septic appearance. The prognosis of newborns with skin, eye, and/or mouth disease in the high-dose acyclovir era is very good. Antiviral treatment not only improves mortality rates in disseminated and central nervous system disease, but also improves the rates of long-term neurodevelopmental impairment in the cases of disseminated disease. Interestingly, a 6-month suppressive course of oral acyclovir following the acute infection has improved the neurodevelopmental prognosis in patients with CNS involvement. Copyright © 2018. Publicado por Elsevier España, S.L.U.

  10. Analytic Method for Computing Instrument Pointing Jitter

    Science.gov (United States)

    Bayard, David

    2003-01-01

    A new method of calculating the root-mean-square (rms) pointing jitter of a scientific instrument (e.g., a camera, radar antenna, or telescope) is introduced based on a state-space concept. In comparison with the prior method of calculating the rms pointing jitter, the present method involves significantly less computation. The rms pointing jitter of an instrument (the square root of the jitter variance shown in the figure) is an important physical quantity which impacts the design of the instrument, its actuators, controls, sensory components, and sensor- output-sampling circuitry. Using the Sirlin, San Martin, and Lucke definition of pointing jitter, the prior method of computing the rms pointing jitter involves a frequency-domain integral of a rational polynomial multiplied by a transcendental weighting function, necessitating the use of numerical-integration techniques. In practice, numerical integration complicates the problem of calculating the rms pointing error. In contrast, the state-space method provides exact analytic expressions that can be evaluated without numerical integration.

  11. Squared eigenfunctions for the Sasa-Satsuma equation

    Science.gov (United States)

    Yang, Jianke; Kaup, D. J.

    2009-02-01

    Squared eigenfunctions are quadratic combinations of Jost functions and adjoint Jost functions which satisfy the linearized equation of an integrable equation. They are needed for various studies related to integrable equations, such as the development of its soliton perturbation theory. In this article, squared eigenfunctions are derived for the Sasa-Satsuma equation whose spectral operator is a 3×3 system, while its linearized operator is a 2×2 system. It is shown that these squared eigenfunctions are sums of two terms, where each term is a product of a Jost function and an adjoint Jost function. The procedure of this derivation consists of two steps: First is to calculate the variations of the potentials via variations of the scattering data by the Riemann-Hilbert method. The second one is to calculate the variations of the scattering data via the variations of the potentials through elementary calculations. While this procedure has been used before on other integrable equations, it is shown here, for the first time, that for a general integrable equation, the functions appearing in these variation relations are precisely the squared eigenfunctions and adjoint squared eigenfunctions satisfying, respectively, the linearized equation and the adjoint linearized equation of the integrable system. This proof clarifies this procedure and provides a unified explanation for previous results of squared eigenfunctions on individual integrable equations. This procedure uses primarily the spectral operator of the Lax pair. Thus two equations in the same integrable hierarchy will share the same squared eigenfunctions (except for a time-dependent factor). In the Appendix, the squared eigenfunctions are presented for the Manakov equations whose spectral operator is closely related to that of the Sasa-Satsuma equation.

  12. Moving least-squares corrections for smoothed particle hydrodynamics

    OpenAIRE

    Bilotta, G.; Russo, G.; Herault, A.; Del Negro, C.

    2011-01-01

    First-order moving least-squares are typically used in conjunction with smoothed particle hydrodynamics in the form of post-processing filters for density fields, to smooth out noise that develops in most applications of smoothed particle hydrodynamics. We show how an approach based on higher-order moving least-squares can be used to correct some of the main limitations in gradient and second-order derivative computation in classic smoothed particle hydrodynamics formulations. With a small in...

  13. Mean Square Synchronization of Stochastic Nonlinear Delayed Coupled Complex Networks

    Directory of Open Access Journals (Sweden)

    Chengrong Xie

    2013-01-01

    Full Text Available We investigate the problem of adaptive mean square synchronization for nonlinear delayed coupled complex networks with stochastic perturbation. Based on the LaSalle invariance principle and the properties of the Weiner process, the controller and adaptive laws are designed to ensure achieving stochastic synchronization and topology identification of complex networks. Sufficient conditions are given to ensure the complex networks to be mean square synchronization. Furthermore, numerical simulations are also given to demonstrate the effectiveness of the proposed scheme.

  14. Investigating the Inverse Square Law with the Timepix Hybrid Silicon Pixel Detector: A CERN [at] School Demonstration Experiment

    Science.gov (United States)

    Whyntie, T.; Parker, B.

    2013-01-01

    The Timepix hybrid silicon pixel detector has been used to investigate the inverse square law of radiation from a point source as a demonstration of the CERN [at] school detector kit capabilities. The experiment described uses a Timepix detector to detect the gamma rays emitted by an [superscript 241]Am radioactive source at a number of different…

  15. Design-based Generalized Least Squares estimation of status and trend of soil properties from monitoring data

    NARCIS (Netherlands)

    Brus, D.J.; Gruijter, de J.J.

    2011-01-01

    This paper introduces and demonstrates design-based Generalized Least Squares (GLS) estimation of spatial means at selected time points from data collected in repeated soil surveys with partial overlap, such as a rotating and a supplemented panel. The linear time trend of the spatial means can then

  16. Multi-source remote-sensing image matching based on epipolar line and least squares

    Science.gov (United States)

    Chen, Peng; Mao, Zhihua; Chen, Jianyu; Zhang, Xiaoping; Li, Zifeng

    2013-10-01

    In remote sensing image applications, the image matching is a very key technology, its quality directly related to the quality of the subsequent results. This paper studied an improved SIFT features matching method for muili-source remote-sensing image registration based on GPU computing, epipolar line and least squares, its main purpose is to take both accuracy and efficiency into consideration. This method is firstly based on tonal balanced methods matching, and then exracts SIFT features based on the GPU computing technology, and then matchs feature points based on epipolar line and least squares matching method with RANSAC method, finally analies error sources of SIFT mismatch, researchs an improved SIFT mismatch reduce strategy.The experimental results prove that the method can effectively improve the efficiency and precision of SIFT feature matching.

  17. Broadband acoustic energy confinement in hierarchical sonic crystals composed of rotated square inclusions

    Science.gov (United States)

    Shakouri, Amir; Xu, Feifei; Fan, Zheng

    2017-07-01

    The propagation of acoustic waves in hierarchical sonic crystals is studied computationally and experimentally. These sonic crystals are composed of a hierarchical order of square inclusions rotated 45° with respect to the square lattice structure. It is shown that these hierarchical sonic crystals are capable of confining acoustic energy over a broad frequency range and at multiple lattice points inside the sonic crystal based on Bragg's scattering effect. Fused deposition modeling additive manufacturing is applied to prepare a finite-sized sample of the hierarchical sonic crystal. Acoustic measurements are conducted on the hierarchical sonic crystal sample in a direct and closely plane-wave field inside an anechoic room. The experimental measurements are in good agreement with the band structure calculated using the finite element method. Potential applications of the hierarchical sonic crystals for acoustic energy harvesting and noise measurements are discussed.

  18. Dynamics of vortex-antivortex creation and annihilation in current-driven mesoscopic superconducting squares

    Science.gov (United States)

    Liang, Xiao-Meng; Zha, Guo-Qiao

    2015-12-01

    In this paper, based on the time-dependent Ginzburg-Landau theory, we study the dynamics of vortex-antivortex (V-Av) pairs in a mesoscopic superconducting square with a small hole under applied bias currents. For the sample with a centered hole, a V-Av pair can nucleate at the hole edges and moves in opposite directions perpendicular to applied constant DC drive. The influence of the external magnetic field on the (anti)vortex velocity and the lifetime of V-Av pairs is mainly investigated. Different modes in the dynamical process of the V-Av collision and annihilation are identified. Moreover, in the case when the hole is displaced from the center of the square, the V-Av dynamics behaves quite differently from the symmetric case due to the shift of the V-Av creation point.

  19. Discrete least squares polynomial approximation with random evaluations − application to parametric and stochastic elliptic PDEs

    KAUST Repository

    Chkifa, Abdellah

    2015-04-08

    Motivated by the numerical treatment of parametric and stochastic PDEs, we analyze the least-squares method for polynomial approximation of multivariate functions based on random sampling according to a given probability measure. Recent work has shown that in the univariate case, the least-squares method is quasi-optimal in expectation in [A. Cohen, M A. Davenport and D. Leviatan. Found. Comput. Math. 13 (2013) 819–834] and in probability in [G. Migliorati, F. Nobile, E. von Schwerin, R. Tempone, Found. Comput. Math. 14 (2014) 419–456], under suitable conditions that relate the number of samples with respect to the dimension of the polynomial space. Here “quasi-optimal” means that the accuracy of the least-squares approximation is comparable with that of the best approximation in the given polynomial space. In this paper, we discuss the quasi-optimality of the polynomial least-squares method in arbitrary dimension. Our analysis applies to any arbitrary multivariate polynomial space (including tensor product, total degree or hyperbolic crosses), under the minimal requirement that its associated index set is downward closed. The optimality criterion only involves the relation between the number of samples and the dimension of the polynomial space, independently of the anisotropic shape and of the number of variables. We extend our results to the approximation of Hilbert space-valued functions in order to apply them to the approximation of parametric and stochastic elliptic PDEs. As a particular case, we discuss “inclusion type” elliptic PDE models, and derive an exponential convergence estimate for the least-squares method. Numerical results confirm our estimate, yet pointing out a gap between the condition necessary to achieve optimality in the theory, and the condition that in practice yields the optimal convergence rate.

  20. Mimicking herpes simplex virus 1 and herpes simplex virus 2 mucosal behavior in a well-characterized human genital organ culture.

    Science.gov (United States)

    Steukers, Lennert; Weyers, Steven; Yang, Xiaoyun; Vandekerckhove, Annelies P; Glorieux, Sarah; Cornelissen, Maria; Van den Broeck, Wim; Temmerman, Marleen; Nauwynck, Hans J

    2014-07-15

    We developed and morphologically characterized a human genital mucosa explant model (endocervix and ectocervix/vagina) to mimic genital herpes infections caused by herpes simplex virus types 1 (HSV-1) and 2 (HSV-2). Subsequent analysis of HSV entry receptor expression throughout the menstrual cycle in genital tissues was performed, and the evolution of HSV-1/-2 mucosal spread over time was assessed. Nectin-1 and -2 were expressed in all tissues during the entire menstrual cycle. Herpesvirus entry mediator expression was limited mainly to some connective tissue cells. Both HSV-1 and HSV-2 exhibited a plaque-wise mucosal spread across the basement membrane and induced prominent epithelial syncytia. © The Author 2014. Published by Oxford University Press on behalf of the Infectious Diseases Society of America. All rights reserved. For Permissions, please e-mail: journals.permissions@oup.com.