Application of a Ligand-based theoretical approach to derive conversion paths and Ligand conformations in CYP11B2-mediated aldosterone formation

NARCIS (Netherlands)

Roumen, L.; Hoof, van B.; Pieterse, K.; Hilbers, P.A.J.; Custers, E.M.G.; Plate, R.; Gooyer, de M.E.; Beugels, I.P.E.; Emmen, J.M.A.; Leysen, D.; Smits, J.F.M.; Ottenheijm, H.C.J.; Hermans, J.J.R.M.

2011-01-01

The biosynthesis of the mineralocorticoid hormone aldosterone involves a multistep hydroxylation of 11-deoxycorticosterone at the 11- and 18-positions, resulting in the formation of corticosterone and 18-hydroxycorticosterone, the final precursor of aldosterone. Two members of the cytochrome P450

Doc Immelman

African Journals Online (AJOL)

Owner

Baarde, briewe en barmhartigheid (2013) verskyn as 'n laaste saluut aan die Namibiese skrywer,. Doc Immelman, ná sy dood in Maart 2013. Hierdie rubriekbundel is Immelman se twee- de versameling rubrieke ná Ruacana tot Rosh. Pinah (2011). Daniel Ferdinand (Doc) Immel- man was onder meer 'n rubriekskrywer, dig-.

Publishing datasets with eSciDoc and panMetaDocs

Science.gov (United States)

Ulbricht, D.; Klump, J.; Bertelmann, R.

2012-04-01

Currently serveral research institutions worldwide undertake considerable efforts to have their scientific datasets published and to syndicate them to data portals as extensively described objects identified by a persistent identifier. This is done to foster the reuse of data, to make scientific work more transparent, and to create a citable entity that can be referenced unambigously in written publications. GFZ Potsdam established a publishing workflow for file based research datasets. Key software components are an eSciDoc infrastructure [1] and multiple instances of the data curation tool panMetaDocs [2]. The eSciDoc repository holds data objects and their associated metadata in container objects, called eSciDoc items. A key metadata element in this context is the publication status of the referenced data set. PanMetaDocs, which is based on PanMetaWorks [3], is a PHP based web application that allows to describe data with any XML-based metadata schema. The metadata fields can be filled with static or dynamic content to reduce the number of fields that require manual entries to a minimum and make use of contextual information in a project setting. Access rights can be applied to set visibility of datasets to other project members and allow collaboration on and notifying about datasets (RSS) and interaction with the internal messaging system, that was inherited from panMetaWorks. When a dataset is to be published, panMetaDocs allows to change the publication status of the eSciDoc item from status "private" to "submitted" and prepare the dataset for verification by an external reviewer. After quality checks, the item publication status can be changed to "published". This makes the data and metadata available through the internet worldwide. PanMetaDocs is developed as an eSciDoc application. It is an easy to use graphical user interface to eSciDoc items, their data and metadata. It is also an application supporting a DOI publication agent during the process of

The determination of unchanged [11C]diprenorphine, [11C]L-deprenyl and [11C]raclopride in plasma by HPLC

International Nuclear Information System (INIS)

Luthra, S.K.; Turton, D.R.; Price, G.; Ahier, R.; Martin, F.; Hume, S.; Cremer, J.

1990-01-01

In PET studies a knowledge of the fraction of radioactivity in plasma representing unchanged 11 C-labelled ligand/tracer is essential for correction of the arterial plasma input curve. A number of different approaches (e.g. HPLC and TLC/OPTLC) to the determination of unchanged radio-ligand/tracer have been reported for 11 C-labelled carfentanil, raclopride and L-deprenyl and for 76 Br-labelled bromolisuride. The authors report here how they have applied the simple work-up and analytical procedure, originally reported for [ 11 C]carfentanil, to establish the percentage of unmchanged 11 C-labelled diprenorphine, L-deprenyl and raclopride in human and animal plasma as a function of time

Plasma Steroid Metabolome Profiling for Diagnosis and Subtyping Patients with Cushing Syndrome.

Science.gov (United States)

Eisenhofer, Graeme; Masjkur, Jimmy; Peitzsch, Mirko; Di Dalmazi, Guido; Bidlingmaier, Martin; Grüber, Matthias; Fazel, Julia; Osswald, Andrea; Beuschlein, Felix; Reincke, Martin

2018-03-01

Diagnosis of Cushing syndrome requires a multistep process that includes verification of hypercortisolism followed by identification of the cause of adrenocortical hyperfunction. This study assessed whether pituitary, ectopic, and adrenal subtypes of Cushing syndrome were characterized by distinct plasma steroid profiles that might assist diagnosis. In this retrospective cross-sectional study, mass spectrometric measurements of a panel of 15 plasma steroids were applied to 222 patient samples tested for Cushing syndrome. Disease was excluded in 138 and confirmed in 51 patients with pituitary Cushing syndrome, 12 with ectopic adrenocorticotropin secretion, and 21 with adrenal disease. Another 277 age- and sex-matched hypertensive and normotensive volunteers were included for comparison. Compared with patients without disease, the largest increases in plasma steroids among patients with Cushing syndrome were observed for 11-deoxycortisol (289%), 21-deoxycortisol (150%), 11-deoxycorticosterone (133%), corticosterone (124%), and cortisol (122%). Patients with ectopic disease showed the most prominent increases, but there was considerable variation for other steroids according to subtype. Patients with adrenal disease had the lowest concentrations of androgens, whereas those with ectopic and pituitary disease showed the lowest concentrations of aldosterone. Plasma 18-oxocortisol was particularly low in ectopic disease. With the use of 10 selected steroids, subjects with and without different Cushing syndrome subtypes could be discriminated nearly as closely as with the use of salivary and urinary free cortisol, dexamethasone-suppressed cortisol, and plasma adrenocorticotropin (9.5% vs 5.8% misclassification). Patients with different subtypes of Cushing syndrome show distinctive plasma steroid profiles that may offer a supplementary single-test alternative for screening purposes. © 2017 American Association for Clinical Chemistry.

(−-Epicatechin Reduces Blood Pressure and Improves Left Ventricular Function and Compliance in Deoxycorticosterone Acetate-Salt Hypertensive Rats

Directory of Open Access Journals (Sweden)

Douglas Jackson

2018-06-01

Full Text Available (−-Epicatechin (E is a flavanol found in green tea and cocoa and has been shown to attenuate tumour necrosis factor alpha (TNF-α-mediated inflammation, improve nitric oxide levels, promote endothelial nitric oxide synthase (eNOS activation and inhibit NADPH oxidase. This study investigated the effect of 28 days of low epicatechin dosing (1 mg/kg/day on the cardiovascular function of deoxycorticosterone acetate (DOCA-salt hypertensive rats. Wistar rats (n = 120, 8 weeks of age underwent uninephrectomy and were randomised into four groups (uninephrectomy (UNX, UNX + E, DOCA, DOCA + E. DOCA and DOCA + E rats received 1% NaCl drinking water along with subcutaneous injections of 25 mg deoxycorticosterone-acetate (in 0.4 mL of dimethylformamide every fourth day. UNX + E and DOCA + E rats received 1 mg/kg/day of epicatechin by oral gavage. Single-cell micro-electrode electrophysiology, Langendorff isolated-heart assessment and isolated aorta and mesenteric organ baths were used to assess cardiovascular parameters. Serum malondialdehyde concentration was used as a marker of oxidative stress. Myocardial stiffness was increased and left ventricular compliance significantly diminished in the DOCA control group, and these changes were attenuated by epicatechin treatment (p < 0.05. Additionally, the DOCA + E rats showed significantly reduced blood pressure and malondialdehyde concentrations; however, there was no improvement in left ventricular hypertrophy, electrophysiology or vascular function. This study demonstrates the ability of epicatechin to reduce blood pressure, prevent myocardial stiffening and preserve cardiac compliance in hypertrophied DOCA-salt rat hearts.

[Effect of the Runoff-sediment Control of the Xiaolangdi Reservoir on DOC Transport].

Science.gov (United States)

Zhang, Yong-ling; Wang, Ming-shi; Dong, Yu-long

2015-04-01

The sampling was carried out in Sanmenxia hydrological station, Xiaolangdi hydrological station and Huayuankou hydrological station from November 2011 to October 2012. The impact of the runoff-sediment control of the Xiaolangdi reservoir on DOC transport,was analyzed. The results were as follows. DOC contents in Sanmenxia station, Xiaolangdi station and Huayuankou station were 1.97-2.71 mg-L(-1), 1.87-2.76 mg x L(-1) and 2.07-2.93 mg x L(-1), respectively, during the normal operation period of Xiaolangdi Reservoir and Sanmenxia reservoir, and the DOC content in the three reservoirs had obvious seasonal change. DOC contents in the three stations were 2.14-3.32 mg x L(-1), 2.21-2.84 mg x L(-1) and 2.11-2.84 mg x L(-1), respectively, during the runoff-sediment control, and the DOC content in the sediment-releasing period of reservoir was higher than that in the water-releasing period of reservoir. DOC content had no significant correlation with TSS and flow either during the normal operation or during the water-sediment regulation of the reservoir. But the DOC content had significant correlation with water temperature during the normal operation of the reservoir. DOC flux in Sanmenxia station was similar to that in Xiaolangdi station from November to March. DOC flux in Sanmenxia station was obviously less than that in Xiaolangdi station from April to July. And the DOC flux in Sanmenxia station was much higher than that in Xiaolangdi station from August to October. The result showed that DOC was retained from August to October by Xiaolangdi reservoir and discharged from Xiaolangdi reservoir from April to July. The yearly DOC fluxes were 8.6 x 10(10), 9.0 x 10(10) and 9.7 x 10(10) g respectively in Sanmenxia station, Xiaolangdi station and Huayuankou station. The DOC flux of Sanmenxia station was the highest in September, which accounted for 22.0% of the yearly DOC flux, and the DOC flux of Xiaolangdi station was the highest in June, which accounted for 17.6% of the

Dissolved organic carbon (DOC) and coliform bacteria in ...

African Journals Online (AJOL)

Out of the 40 sites sampled during both the wet and dry seasons, 11 contained colifrorm bacteria during the wet season, while only 2 contained the microbes during the dry season. The microbes were detected only in the wells. DOC was detected in 37 sites during the wet season and in 31 sites during the dry season within ...

Doc2B acts as a calcium sensor for vesicle priming requiring synaptotagmin-1, Munc13-2 and SNAREs

DEFF Research Database (Denmark)

Houy, Sébastien; Groffen, Alexander J; Ziomkiewicz, Iwona

2017-01-01

Doc2B is a cytosolic protein with binding sites for Munc13 and Tctex-1 (dynein light chain), and two C2-domains that bind to phospholipids, Ca2+ and SNAREs. Whether Doc2B functions as a calcium sensor akin to synaptotagmins, or in other calcium-independent or calcium-dependent capacities is debated....... We here show by mutation and overexpression that Doc2B plays distinct roles in two sequential priming steps in mouse adrenal chromaffin cells. Mutating Ca2+-coordinating aspartates in the C2A-domain localizes Doc2B permanently at the plasma membrane, and renders an upstream priming step Ca2......+-independent, whereas a separate function in downstream priming depends on SNARE-binding, Ca2+-binding to the C2B-domain of Doc2B, interaction with ubMunc13-2 and the presence of synaptotagmin-1. Another function of Doc2B - inhibition of release during sustained calcium elevations - depends on an overlapping...

[Variation of water DOC during the process of pre-pressure and coagulation sedimentation treatment].

Science.gov (United States)

Chen, Wen-Jing; Cong, Hai-Bing; Xu, Ya-Jun; Wang, Wei; Jiang, Xin-Yue; Liu, Yu-Jiao

2014-07-01

The aim of the study was to explore whether the pre-pressure and coagulation sedimentation process would result in algal cell disruption, leading to increased dissolved organic carbon (DOC) in water, based on which, the pressure application mode would be optimized and safe and efficient pre-pressure algae removal process would be obtained. The changes in DOC during the process of pre-pressure and preoxidation treatment, the distribution of molecular weight in water as well as the removal efficiency of algae, turbidity and DOC after coagulation and sedimentation were investigated. The results showed that the DOC in water did not increase but decreased, and the molecular weight decreased after treated with 0.5-0.8 MPa pressure. While KMnO4 and NaClO pre-oxidation both increased the DOC, in the meanwhile, the distribution of molecular weight showed no obvious change. After the pre-pressure coagulation and sedimentation process, the removal rate of algae was 96.23% and that of DOC was 29. 11%, which was by 10% - 30% higher than the rate of pre-oxidation coagulation and sedimentation process.

The two faces of DOC.

Science.gov (United States)

Wood, Chris M; Al-Reasi, H A; Smith, D Scott

2011-10-01

Dissolved organic carbon (DOC), through its ability to complex metals and thereby reduce their bioavailability, plays a major role in ameliorating metal toxicity in natural waters. Indeed DOC is a key variable in the Biotic Ligand Model (BLM) for predicting metal toxicity on a site-specific basis. However, recent evidence indicates that all DOCs are not alike, but rather heterogeneous in their ability to protect organisms against metal toxicity, at least in fresh water. The degree of protection appears to correlate with optical properties, such that dark, aromatic-rich compounds of allochthonous origin, with greater humic acid content, are more effective in this regard, particularly against Cu, Ag, and Pb toxicity. The specific absorption coefficient of the DOC in the 300-350nm range (SAC(300-350)) has proven to be a simple and effective index of this protective ability. PARAFAC, a multivariate statistical technique for analysis of excitation-emission fluorescence spectroscopy data, also holds promise for quantifying the humic-like and fulvic-like fluorophores, which tend to be positively and negatively correlated with protective ability, respectively. However, what has been largely missing in the toxicological realm is any appreciation that DOC may also affect the physiology of target organisms, such that part of the protection may occur by a mechanism other than metal complexation. Recently published evidence demonstrates that DOC has effects on Na(+) transport, diffusive permeability, and electrical properties of the gills in fish and crustaceans in a manner which will promote Na(+) homeostasis. These actions could thereby protect against metal toxicity by physiological mechanisms. Future research should investigate potential direct interactions of DOC molecules with the branchial epithelium. Incorporation of optical properties of DOC could be used to improve the predictive capabilities of the BLM. 2011 Elsevier B.V. All rights reserved.

Radioimmunoassay of free urinary 18-hydroxydeoxycorticosterone (18-OH-DOC) in patients with essential hypertension

International Nuclear Information System (INIS)

Hornung, J.; Gless, K.H.; Abdelhamid, S.; Vielhauer, W.; Vecsei, P.

1978-01-01

Specific antiserum was raised in white New Zealand rabbits using 18-hydroxydeoxycorticosterone-3-oxime-BSA complex as antigen. The urinary free 18-OH-DOC was estimated after dichloromethane extraction and separation in one paper chromatographic system (propylene glycol/toluene). The mean 18-OH-DOC excretion value (+-S.D.) in normal subjects was 0.861+-0.527 μg/24 h (n=23). ACTH produced a 25-fold increase in the excretion of free 18-OH-DOC. Dexamethasone suppressed the values to the lower range of sensitivity. 32% of patients of essential hypertension showed a moderate increase in the free urinary 18-OH-DOC values. The mean value (+-S.D.) in the low renin hypertension group was 2.50 +- 1.49 μg/24 h (n=19), in the normal renin patient group 1.84 +- 1.32 μg/24 h (n=38), and in the group with elevated plasma renin 1.61 +- 1.22 μg/24 h (n=8). The difference between controls and the hypertensive groups was statistically significant. Among the different hypertensive groups significant differences could not be calculated. (Auth.)

Nonlinear and threshold-dominated runoff generation controls DOC export in a small peat catchment

Science.gov (United States)

Birkel, C.; Broder, T.; Biester, H.

2017-03-01

We used a relatively simple two-layer, coupled hydrology-biogeochemistry model to simultaneously simulate streamflow and stream dissolved organic carbon (DOC) concentrations in a small lead and arsenic contaminated upland peat catchment in northwestern Germany. The model procedure was informed by an initial data mining analysis, in combination with regression relationships of discharge, DOC, and element export. We assessed the internal model DOC processing based on stream DOC hysteresis patterns and 3-hourly time step groundwater level and soil DOC data for two consecutive summer periods in 2013 and 2014. The parsimonious model (i.e., few calibrated parameters) showed the importance of nonlinear and rapid near-surface runoff generation mechanisms that caused around 60% of simulated DOC load. The total load was high even though these pathways were only activated during storm events on average 30% of the monitoring time—as also shown by the experimental data. Overall, the drier period 2013 resulted in increased nonlinearity but exported less DOC (115 kg C ha-1 yr-1 ± 11 kg C ha-1 yr-1) compared to the equivalent but wetter period in 2014 (189 kg C ha-1 yr-1 ± 38 kg C ha-1 yr-1). The exceedance of a critical water table threshold (-10 cm) triggered a rapid near-surface runoff response with associated higher DOC transport connecting all available DOC pools and subsequent dilution. We conclude that the combination of detailed experimental work with relatively simple, coupled hydrology-biogeochemistry models not only allowed the model to be internally constrained but also provided important insight into how DOC and tightly coupled pollutants or trace elements are mobilized.

Localization of aldosterone and corticosterone in the central nervous system, assessed by quantitative autoradiography

International Nuclear Information System (INIS)

Birmingham, M.K.; Sar, M.; Stumpf, W.E.

1984-01-01

Nuclear localization of tritiated aldosterone in the CNS was studied in rats by numerical evaluation of silver grains, deposited over neuronal cell nuclei in thaw-mounted autoradiograms, and compared with the localization obtained after prior administration of a 100-fold excess of radioinert aldosterone, corticosterone or 18-hydroxy-11-deoxycorticosterone (18-OH-DOC). Corticosterone and 18-OH-DOC completely prevented nuclear localization in most regions examined. However, in contrast to pretreatment with aldosterone, pretreatment with corticosterone and 18-OH-DOC did not completely prevent the concentration of radioactivity in the cell nuclei of the indusium griseum. Traces of radioactivity were, furthermore, retained in areas CA1 and CA2 and the dentate gyrus in rats exposed to corticosterone, but not to 18-OH-DOC, prior to [ 3 H]aldosterone. A similar profile of silver grain distribution to that noted with aldosterone was found for corticosterone except that with tritiated corticosterone the most intense concentration of radioactivity occurred in hippocampal areas CA1 and CA2 and not in the indusium griseum. The authors conclude that (1) a receptor readily shared by aldosterone, corticosterone, 18-OH-DOC and DOC, but not by dihydrotestosterone, is widely distributed throughout the CNS, (2) a receptor shared by aldosterone and 18-OH-DOC, but not by corticosterone may be present in hippocampal areas CA1 and CA2, (3) that both these as well as the receptor accepting dihydrotestosterone can be located within the same cell

Quantification of dissolved organic carbon (DOC) storage in lakes and reservoirs of mainland China.

Science.gov (United States)

Song, Kaishan; Wen, Zhidan; Shang, Yingxing; Yang, Hong; Lyu, Lili; Liu, Ge; Fang, Chong; Du, Jia; Zhao, Ying

2018-04-04

As a major fraction of carbon in inland waters, dissolved organic carbon (DOC) plays a crucial role in carbon cycling on a global scale. However, the quantity of DOC stored in lakes and reservoirs was not clear to date. In an attempt to examine the factors that determine the DOC storage in lakes and reservoirs across China, we assembled a large database (measured 367 lakes, and meta-analyzed 102 lakes from five limnetic regions; measured 144 reservoirs, and meta-analyzed 272 reservoirs from 31 provincial units) of DOC concentrations and water storages for lakes and reservoirs that are used to determine DOC storage in static inland waters. We found that DOC concentrations in saline waters (Mean/median ± S.D: 50.5/30.0 ± 55.97 mg/L) are much higher than those in fresh waters (8.1/5.9 ± 6.8 mg/L), while lake DOC concentrations (25.9/11.5 ± 42.04 mg/L) are much higher than those in reservoirs (5.0/3.8 ± 4.5 mg/L). In terms of lake water volume and DOC storage, the Tibet-Qinghai lake region has the largest water volume (552.8 km 3 ), 92% of which is saline waters, thus the largest DOC (13.39 Tg) is stored in these alpine lake region; followed by the Mengxin lake region, having a water volume of 99.4 km 3 in which 1.75 Tg DOC was stored. Compared to Mengxin lake region, almost the same amount of water was stored in East China lake region (91.9 km 3 ), however, much less DOC was stored in this region (0.43 Tg) due to the lower DOC concentration (Ave: 3.45 ± 2.68 mg/L). According to our investigation, Yungui and Northeast lake regions had water storages of 32.14 km 3 and 19.44 km 3 respectively, but relatively less DOC was stored in Yungui (0.13 Tg) than in Northeast lake region (0.19 Tg). Due to low DOC concentration in reservoirs, especially these large reservoirs having lower DOC concentration (V > 1.0 km 3 : 2.31 ± 1.48 mg/L), only 1.54 Tg was stored in a 485.1 km 3 volume of water contained

Cold storage as a method for the long-term preservation of tropical dissolved organic carbon (DOC

Directory of Open Access Journals (Sweden)

S. Cook

2016-11-01

Full Text Available Fluvial fluxes of dissolved organic carbon (DOC may represent an important loss for terrestrial carbon stores in the tropics. However, there is currently limited guidance on the preservation of tropical water samples for DOC analysis. Commonly employed preservation techniques such as freezing or acidification can limit degradation but may also alter sample properties, complicating DOC analysis. We examined the effects of cold storage at 4 °C on DOC concentration and quality in water samples collected from a tropical peat catchment. Samples were stored in the dark at 4 °C for periods of 6–12 weeks. Freeze/thaw experiments were also made. Mean DOC concentrations in samples stored for six weeks at 4 °C were 6.1 % greater than in samples stored at ambient room temperature (33 °C over the same period. Changes in DOC concentrations, in two sample sets, during cold storage were 2.25 ± 2.9 mg L-1 (8 % to 2.69 ± 1.4 mg L-1 (11 % over a 12-week period. Freeze/thaw resulted in alterations in the optical properties of samples, and this in turn altered the calculated DOC concentrations by an average of 10.9 %. We conclude that cold storage at 4 °C is an acceptable preservation method for tropical DOC water samples, for moderate time periods, and is preferable to freezing or storage at ambient temperatures.

Investigating Forest Harvest Effects on DOC Concentration and Quality: An In Situ, High Resolution Approach to Quantifying DOC Export Dynamics

Science.gov (United States)

Jollymore, A. J.; Johnson, M. S.; Hawthorne, I.

2013-12-01

Justification: Forest harvest effects on water quality can signal alterations in hydrologic and ecologic processes incurred as a result of forest harvest activities. Organic matter (OM), specifically dissolved organic carbon (DOC), plays a number of important roles mediating UV-light penetration, redox reactivity and microbial activity within aquatic ecosystems. Quantification of DOC is typically pursued via grab sampling followed by chemical or spectrophotometric analysis, limiting the temporal resolution obtained as well as the accuracy of export calculations. The advent of field-deployable sensors capable of measuring DOC concentration and certain quality characteristics in situ provides the ability to observe dynamics at temporal scales necessary for accurate calculation of DOC flux, as well as the observation of dynamic changes in DOC quality on timescales impossible to observe through grab sampling. Methods: This study utilizes a field deployable UV-Vis spectrophotometer (spectro::lyzer, s::can, Austria) to investigate how forest harvest affects DOC export. The sensor was installed at an existing hydrologic monitoring site at the outlet of a headwater stream draining a small (91 hectare) second growth Douglasfir-dominated catchment near Campbell River on Vancouver Island, British Columbia. Measurement began late in 2009, prior to forest harvest and associated activities such as road building (which commenced in October 2010 and ended in early 2011), and continues to present. During this time - encompassing the pre, during and post-harvest conditions - the absorbance spectrum of stream water from 200 to 750 nm was measured. DOC concentration and spectroscopic indices related to DOC quality (including SUVA, which relates to the concentration of aromatic carbon, and spectral slope) were subsequently calculated for each spectra obtained at 30-minute intervals. Results and conclusions: High frequency measurements of DOC show that overall export of OM increased in

76 FR 9210 - Draft DOC National Aquaculture Policy

Science.gov (United States)

2011-02-16

... DEPARTMENT OF COMMERCE Draft DOC National Aquaculture Policy AGENCY: Commerce. ACTION: Notice of availability of draft aquaculture policy; request for comments. SUMMARY: The Department of Commerce (DOC) is... United States. The intent of the policy is to guide DOC's actions and decisions on aquaculture and to...

CDOM-DOC relationship in contrasted coastal waters: implication for DOC retrieval from ocean color remote sensing observation.

Science.gov (United States)

Vantrepotte, Vincent; Danhiez, François-Pierre; Loisel, Hubert; Ouillon, Sylvain; Mériaux, Xavier; Cauvin, Arnaud; Dessailly, David

2015-01-12

Increasing our knowledge on dissolved organic carbon (DOC) spatio-temporal distribution in the coastal ocean represents a crucial challenge for better understanding the role of these ecosystems in the global oceanic carbon cycle. The assessment of DOC concentration from the absorption properties of the colored part of the dissolved organic matter (a(cdom)) was investigated from an extensive data set covering a variety of coastal environments. Our results confirmed that variation in the a(cdom)(412) to DOC ratio (a*(cdom)(412)) can be depicted from the CDOM spectral slope in the UV domain (S(275-295)). They also evidenced that regional first order variation in both a*(cdom)(412) and S(275-295) are highly correlated to variation in a(cdom)(412). From these observations, generalized relationships for estimating a*(cdom)(412) from S(275-295) or a(cdom)(412) were parameterized from our development sites (N = 158; English Channel, French Guiana, Hai Phong Bay) and tested against an independent data set covering others coastal regions (N = 223; French Polynesia, Rhone River estuary, Gulf of Maine, Chesapeake Bay, Southern Middle Atlantic Bight) demonstrating the possibility to derive DOC estimates from in situ CDOM optical properties with an average accuracy of ~16% over very contrasted coastal environments (with DOC ranging from 50 to 250 µmol.L(-1)). The applicability of these generalized approaches was evaluated in the context of ocean color remote sensing observation emphasizing the limits of S(275-295)-based formulations and the potential for a(cdom)-based approaches to represent a compelling alternative for assessing synoptic DOC distribution.

Decreasing soil water Ca2+ reduces DOC adsorption in mineral soils: implications for long-term DOC trends in an upland forested catchment in southern Ontario, Canada.

Science.gov (United States)

Kerr, Jason Grainger; Eimers, M Catherine

2012-06-15

Positive trends in dissolved organic carbon (DOC) concentration have been observed in surface waters throughout North America and northern Europe. Although adsorption in mineral soils is an important driver of DOC in upland streams, little is known about the potential for changes in DOC adsorption to contribute to these trends. We hypothesized that long-term declines in soil water Ca(2+) levels, in response to declining acid deposition, might influence DOC adsorption and that this could contribute to long-term DOC trends in an upland forested catchment in south-central Ontario, Canada. Between 1987 and 2009, DOC concentrations increased significantly (pDOC concentration (DOC(np)), which is a measure of the soil water DOC concentration at equilibrium with the soil, ranged from 1.27 to 3.75 mg L(-1) in B horizon soils. This was similar to the mean DOC concentrations of B horizon soil water (2.04-6.30 mg L(-1)) and stream water (2.20 mg L(-1)), indicating that soil and stream water DOC concentrations are controlled by equilibrium processes at the soil-water interface. Adsorption experiments using variable Ca(2+) concentrations demonstrated that as Ca(2+) decreased the DOC(np) increased (1.96 to 4.74 mg L(-1)), which was consistent with the observed negative correlation between DOC and Ca(2+) in B horizon soil water (pDOC adsorption (p>0.05), indicating that changes in DOC adsorption might be related to cation bridging. We conclude that declines in soil water Ca(2+) concentration can contribute to increasing DOC trends in upland streams by reducing DOC adsorption in mineral soils. Copyright © 2012 Elsevier B.V. All rights reserved.

Earth System Documentation (ES-DOC) Preparation for CMIP6

Science.gov (United States)

Denvil, S.; Murphy, S.; Greenslade, M. A.; Lawrence, B.; Guilyardi, E.; Pascoe, C.; Treshanksy, A.; Elkington, M.; Hibling, E.; Hassell, D.

2015-12-01

During the course of 2015 the Earth System Documentation (ES-DOC) project began its preparations for CMIP6 (Coupled Model Inter-comparison Project 6) by further extending the ES-DOC tooling ecosystem in support of Earth System Model (ESM) documentation creation, search, viewing & comparison. The ES-DOC online questionnaire, the ES-DOC desktop notebook, and the ES-DOC python toolkit will serve as multiple complementary pathways to generating CMIP6 documentation. It is envisaged that institutes will leverage these tools at different points of the CMIP6 lifecycle. Institutes will be particularly interested to know that the documentation burden will be either streamlined or completely automated.As all the tools are tightly integrated with the ES-DOC web-service, institutes can be confident that the latency between documentation creation & publishing will be reduced to a minimum. Published documents will be viewable with the online ES-DOC Viewer (accessible via citable URL's). Model inter-comparison scenarios will be supported using the ES-DOC online Comparator tool. The Comparator is being extended to:• Support comparison of both Model descriptions & Simulation runs;• Greatly streamline the effort involved in compiling official tables.The entire ES-DOC ecosystem is open source and built upon open standards such as the Common Information Model (CIM) (versions 1 and 2).

A transcriptional coregulator, SPIN·DOC, attenuates the coactivator activity of Spindlin1.

Science.gov (United States)

Bae, Narkhyun; Gao, Min; Li, Xu; Premkumar, Tolkappiyan; Sbardella, Gianluca; Chen, Junjie; Bedford, Mark T

2017-12-22

Spindlin1 (SPIN1) is a transcriptional coactivator with critical functions in embryonic development and emerging roles in cancer. SPIN1 harbors three Tudor domains, two of which engage the tail of histone H3 by reading the H3-Lys-4 trimethylation and H3-Arg-8 asymmetric dimethylation marks. To gain mechanistic insight into how SPIN1 functions as a transcriptional coactivator, here we purified its interacting proteins. We identified an uncharacterized protein (C11orf84), which we renamed SPIN1 docking protein (SPIN·DOC), that directly binds SPIN1 and strongly disrupts its histone methylation reading ability, causing it to disassociate from chromatin. The Spindlin family of coactivators has five related members (SPIN1, 2A, 2B, 3, and 4), and we found that all of them bind SPIN·DOC. It has been reported previously that SPIN1 regulates gene expression in the Wnt signaling pathway by directly interacting with transcription factor 4 (TCF4). We observed here that SPIN·DOC associates with TCF4 in a SPIN1-dependent manner and dampens SPIN1 coactivator activity in TOPflash reporter assays. Furthermore, knockdown and overexpression experiments indicated that SPIN·DOC represses the expression of a number of SPIN1-regulated genes, including those encoding ribosomal RNA and the cytokine IL1B. In conclusion, we have identified SPIN·DOC as a transcriptional repressor that binds SPIN1 and masks its ability to engage the H3-Lys-4 trimethylation activation mark. © 2017 by The American Society for Biochemistry and Molecular Biology, Inc.

DOC-dynamics in a small headwater catchment as driven by redox fluctuations and hydrological flow paths – are DOC exports mediated by iron reduction/oxidation cycles?

Directory of Open Access Journals (Sweden)

K.-H. Knorr

2013-02-01

Full Text Available Dissolved organic carbon (DOC exports from many catchments in Europe and North-America are steadily increasing. Several studies have sought to explain this observation. As possible causes, a decrease in acid rain or sulfate deposition, concomitant reductions in ionic strength and increasing temperatures were identified. DOC often originates from riparian wetlands; but here, despite higher DOC concentrations, ionic strength in pore waters usually exceeds that in surface waters. In the catchment under study, DOC concentrations were synchronous with dissolved iron concentrations in pore and stream water. This study aims at testing the hypothesis that DOC exports are mediated by iron reduction/oxidation cycles. Following the observed hydrographs, δ¹⁸O of water and DOC fluorescence, the wetlands were identified as the main source of DOC. Antecedent biogeochemical conditions, i.e., water table levels in the wetlands, influenced the discharge patterns of nitrate, iron and DOC during an event. The correlation of DOC with pH was positive in pore waters, but negative in surface waters; it was negative for DOC with sulfate in pore waters, but only weak in surface waters. Though, the positive correlation of DOC with iron was universal for pore and surface water. The decline of DOC and iron concentrations in transition from anoxic wetland pore water to oxic stream water suggests a flocculation of DOC with oxidising iron, leading to a drop in pH in the stream during high DOC fluxes. The pore water did not per se differ in pH. There is, thus, a need to consider processes more thoroughly of DOC mobilisation in wetlands when interpreting DOC exports from catchments. The coupling of DOC with iron fluxes suggested that increased DOC exports could at least, in part, be caused by increasing activities in iron reduction, possibly due to increases in temperature, increasing wetness of riparian wetlands, or by a shift from sulfate dominated to iron

DocSaludMental en netvibes

OpenAIRE

Onís, Ricardo

2011-01-01

DocSaludMental es un escritorio virtual que, a partir de la plataforma netvibes, permite el acceso a información especializada y actualizada mediante la sindicación de contenidos a todos los profesionales de la red de salud mental en el Principado de Asturias DocSaludMental is a virtual desktop that allows access to expert information and updated from content syndication to all professionals in the mental health network in the Principality of Asturias

48 CFR 1329.203-70 - DOC Federal tax exemption.

Science.gov (United States)

2010-10-01

... 48 Federal Acquisition Regulations System 5 2010-10-01 2010-10-01 false DOC Federal tax exemption... CONTRACTING REQUIREMENTS TAXES Federal Excise Taxes 1329.203-70 DOC Federal tax exemption. (a) The Office of... enabling DOC and its contractors to purchase spirits (e.g., specially denatured spirits) tax-free for non...

Munc13-4 Is a Rab11-binding Protein That Regulates Rab11-positive Vesicle Trafficking and Docking at the Plasma Membrane.

Science.gov (United States)

Johnson, Jennifer L; He, Jing; Ramadass, Mahalakshmi; Pestonjamasp, Kersi; Kiosses, William B; Zhang, Jinzhong; Catz, Sergio D

2016-02-12

The small GTPase Rab11 and its effectors control trafficking of recycling endosomes, receptor replenishment and the up-regulation of adhesion and adaptor molecules at the plasma membrane. Despite recent advances in the understanding of Rab11-regulated mechanisms, the final steps mediating docking and fusion of Rab11-positive vesicles at the plasma membrane are not fully understood. Munc13-4 is a docking factor proposed to regulate fusion through interactions with SNAREs. In hematopoietic cells, including neutrophils, Munc13-4 regulates exocytosis in a Rab27a-dependent manner, but its possible regulation of other GTPases has not been explored in detail. Here, we show that Munc13-4 binds to Rab11 and regulates the trafficking of Rab11-containing vesicles. Using a novel Time-resolved Fluorescence Resonance Energy Transfer (TR-FRET) assay, we demonstrate that Munc13-4 binds to Rab11a but not to dominant negative Rab11a. Immunoprecipitation analysis confirmed the specificity of the interaction between Munc13-4 and Rab11, and super-resolution microscopy studies support the interaction of endogenous Munc13-4 with Rab11 at the single molecule level in neutrophils. Vesicular dynamic analysis shows the common spatio-temporal distribution of Munc13-4 and Rab11, while expression of a calcium binding-deficient mutant of Munc13-4 significantly affected Rab11 trafficking. Munc13-4-deficient neutrophils showed normal endocytosis, but the trafficking, up-regulation, and retention of Rab11-positive vesicles at the plasma membrane was significantly impaired. This correlated with deficient NADPH oxidase activation at the plasma membrane in response to Rab11 interference. Our data demonstrate that Munc13-4 is a Rab11-binding partner that regulates the final steps of Rab11-positive vesicle docking at the plasma membrane. © 2016 by The American Society for Biochemistry and Molecular Biology, Inc.

Mechanized Sephadex LH-20 multiple column chromatography as a prerequisite for automated multi-steroid radioimmunoassays

International Nuclear Information System (INIS)

Sippell, W.G.; Bidlingmaier, F.; Knorr, D.

1978-01-01

To establish a procedure for the simultaneous determination of all major corticosteroid hormones and their immediate biological precursors in the same plasma sample, two different mechanized methods for the simultaneous isolation of aldosterone (A), corticosterone (B), 11-deoxycorticosterone (DOC), progesterone (P), 17-hydroxyprogesterone (17-OHP), 11-deoxycortisol (S), cortisol (F) and cortisone (E) from the methylene chloride extracts of 0.1 to 2.0ml plasma samples have been developed. In method I, steroids are separated with methylene chloride:methanol=98:2 as solvent system on 60-cm Sephadex LH-20 columns, up to eight of which are eluted in parallel using a multi-channel peristaltic pump and individual flow-rate control (40ml/h) by capillary valves and micro-flowmeters. Method II, on the other hand, utilizes the same solvent system on ten 75-cm LH-20 columns which are eluted in reversed flow simultaneously by a ten-channel, double-piston pump that precisely maintains an elution flow rate of 40ml/h in every column. In both methods, eluate fractions of each of the isolated steroids are automatically pooled and collected from all parallel columns by one programmable linear fraction collector. As a result of the high reproducibility of the elution patterns, both between different parallel columns and between 30 to 40 consecutive elutions, mean recoveries of tritiated steroids including extraction are 60 to 84% after a single separation and still over 50% after an additional separation on 40-cm LH-20 columns, with coefficients of variation below 15% (method II). Thus, the eight steroids can be completely isolated from each of ten plasma extracts within 3 to 4 hours, yielding 80 samples readily prepared for subsequent quantitation by radioimmunoassay. (author)

Inverse coupling of DOC and nitrate export from soils and streams

Science.gov (United States)

Goodale, Christine

2013-04-01

Over the last two decades, nitrate concentrations in surface waters have decreased across the Northeastern United States and parts of northern Europe. Many hypotheses have been proposed to explain this decrease, but the cause remains unclear. One control may be associated with increasing abundance of dissolved organic carbon (DOC), which in turn may be a result of soil recovery from acidification. Compared across catchments, surface water NO3- decreases sharply with increasing DOC concentration. Here, we used measurements of soil and solution nitrate, DOC, and their isotopic composition (13C-DOC, 15N- and 18O-NO3) to test several related hypotheses that changing acidification affects the release of DOC and bio-available DOC (bDOC) from soil, and that variation in stocks of soil C and release of bDOC partly control NO3- export from forested catchments in New York State, USA. We examined whether DOC and NO3- are both driven by soil C processes that produce inverse coupling at the scale of soil cores as well as across catchments, through comparison of soil and surface water chemistry across nine catchments selected from long-term monitoring networks in the Catskill and Adirondack Mountains. In addition, we conducted a series of soil core leaching experiments to examine the role of acidification and recovery in driving the net production of DOC and NO3- from soils. Over 8 months, soil cores were leached biweekly with simulated rainfall solutions of varying pH (3.6 to 7.0) from additions of H2SO4, CaCO3 and NaOH. These experiments did not yield a pH-induced change in DOC quantity, but did show a change in DOC quality, in that acidified cores released more bio-available DOC with less depleted 13C-DOC than cores with experimentally increased pH. All cores leached substantial amounts of nitrate. Together, these lab- and field comparisons are being used to identify the role of soil production and consumption processes in driving cross-watershed differences in DOC and NO3

CDOM-DOC relationship in contrasted coastal waters : implication for DOC retrieval from ocean color remote sensing observation

OpenAIRE

Vantrepotte, V.; Danhiez, F. P.; Loisel, Hubert; Ouillon, Sylvain; Meriaux, X.; Cauvin, A.; Dessailly, D.

2015-01-01

Increasing our knowledge on dissolved organic carbon (DOC) spatio-temporal distribution in the coastal ocean represents a crucial challenge for better understanding the role of these ecosystems in the global oceanic carbon cycle. The assessment of DOC concentration from the absorption properties of the colored part of the dissolved organic matter (a(cdom)) was investigated from an extensive data set covering a variety of coastal environments. Our results confirmed that variation in the acdom(...

Delivery of adjuvant sequential dose-dense FEC-Doc to patients with breast cancer is feasible, but dose reductions and toxicity are dependent on treatment sequence.

Science.gov (United States)

Wildiers, H; Dirix, L; Neven, P; Prové, A; Clement, P; Squifflet, P; Amant, F; Skacel, T; Paridaens, R

2009-03-01

This study prospectively investigates the impact of dose densification and altering sequence of fluorouracil, epirubicin and cyclophosphamide [FEC(100)] and docetaxel [Doc] on dose delivery and tolerability of adjuvant chemotherapy in breast cancer patients. 117 patients with high-risk primary operable breast cancer were randomized (1:1:2:2) to conventional (three cycles of 3-weekly FEC(100) then three cycles of 3-weekly Doc 100 mg/m(2) or reverse sequence) or dose-dense (dd) treatment (four 10- to 11-day cycles of FEC(75) then four 2-weekly cycles of Doc 75 mg/m(2), or the reverse). In the dd arms, pegfilgrastim was given on day 2 of each cycle, but only as secondary prophylaxis in conventional arms. The primary endpoint was the proportion of patients completing intended cycles at relative dose intensity >or=85% and this was achieved by 95% of patients in each group except for the ddDoc-->FEC group (90%). Dose intensity in the dd arms increased by 48% for FEC and 11% for docetaxel, compared with the conventional arms (both P Doc dose reductions were more frequent with dd treatment and when Doc was given after FEC. Grade 3-4 neutropenia was significantly more frequent with conventional treatment, while fatigue and hand-foot syndrome were numerically more common with dd treatment, particularly when Doc was given after FEC. Discussion Delivery of adjuvant sequential ddFEC and Doc is feasible with growth factor support, and chemotherapy sequence appeared to affect delivery of target doses and toxicity.

PREFACE: 11th Asia-Pacific Conference on Plasma Science and Technology (APCPST-11) and 25th Symposium on Plasma Science for Materials (SPSM-25)

Science.gov (United States)

Watanabe, Takayuki; Kaneko, Toshio; Sekine, Makoto; Tanaka, Yasunori

2013-06-01

The 11th Asia-Pacific Conference on Plasma Science and Technology (APCPST-11) was held in Kyoto, Japan on 2-5 October 2012 with the 25th Symposium on Plasma Science for Materials (SPSM-25). SPSM has been held annually since 1988 under the sponsorship of The 153rd Committee on Plasma Materials Science, Japan Society for the Promotion of Science (JSPS). This symposium is one of the major activities of the Committee, which is organized by researchers in academia and industry for the purpose of advancing intersectional scientific information exchange and discussion of science and technology of plasma materials processing. APCPST and SPSM are jointly held biennially to survey the current status of low temperature and thermal plasma physics and chemistry for industrial applications. The whole area of plasma processing was covered from fundamentals to applications. Previous meetings were held in China, Japan, Korea, and Australia, attended by scientists from the Asia-Pacific and other countries. The joint conference was organized in plenary lectures, invited, contributed oral presentations and poster sessions. At this meeting, we had 386 participants from 10 countries and 398 presentations, including 26 invited presentations. This year, we arranged special topical sessions that covered green innovation, life innovation, and technical reports from industry. This conference seeks to bring the plasma community together and to create a forum for discussing the latest developments and issues, the challenges ahead in the field of plasma research and applications among engineers and scientists in Asia, the Pacific Rim, as well as Europe. This volume presents 44 papers that were selected via a strict peer-review process from full papers submitted for the proceedings of the conference. The topics range from the basic physics and chemistry of plasma processing to a broad variety of materials processing and environmental applications. This volume offers an overview of recent

Acute effects of 3,4-methylenedioxymethamphetamine and methylphenidate on circulating steroid levels in healthy subjects.

Science.gov (United States)

Seibert, Julia; Hysek, Cédric M; Penno, Carlos A; Schmid, Yasmin; Kratschmar, Denise V; Liechti, Matthias E; Odermatt, Alex

2014-01-01

3,4-Methylenedioxymethamphetamine (MDMA, 'ecstasy') and methylphenidate are widely used psychoactive substances. MDMA primarily enhances serotonergic neurotransmission, and methylphenidate increases dopamine but has no serotonergic effects. Both drugs also increase norepinephrine, resulting in sympathomimetic properties. Here we studied the effects of MDMA and methylphenidate on 24-hour plasma steroid profiles. 16 healthy subjects (8 men, 8 women) were treated with single doses of MDMA (125 mg), methylphenidate (60 mg), MDMA + methylphenidate, and placebo on 4 separate days using a cross-over study design. Cortisol, cortisone, corticosterone, 11-dehydrocorticosterone, aldosterone, 11-deoxycorticosterone, dehydroepiandrosterone (DHEA), dehydroepiandrosterone sulfate (DHEAS), androstenedione, and testosterone were repeatedly measured up to 24 h using liquid chromatography-tandem mass spectroscopy. MDMA significantly increased the plasma concentrations of cortisol, corticosterone, 11-dehydrocorticosterone, and 11-deoxycorticosterone and also tended to moderately increase aldosterone levels compared with placebo. MDMA also increased the sum of cortisol + cortisone and the cortisol/cortisone ratio, consistent with an increase in glucocorticoid production. MDMA did not alter the levels of cortisone, DHEA, DHEAS, androstenedione, or testosterone. Methylphenidate did not affect any of the steroid concentrations, and it did not change the effects of MDMA on circulating steroids. In summary, the serotonin releaser MDMA has acute effects on circulating steroids. These effects are not observed after stimulation of the dopamine and norepinephrine systems with methylphenidate. The present findings support the view that serotonin rather than dopamine and norepinephrine mediates the acute pharmacologically induced stimulation of the hypothalamic-pituitary-adrenal axis in the absence of other stressors. © 2014 S. Karger AG, Basel.

Doc toxin is a kinase that inactivates elongation factor Tu.

Science.gov (United States)

Cruz, Jonathan W; Rothenbacher, Francesca P; Maehigashi, Tatsuya; Lane, William S; Dunham, Christine M; Woychik, Nancy A

2014-03-14

The Doc toxin from bacteriophage P1 (of the phd-doc toxin-antitoxin system) has served as a model for the family of Doc toxins, many of which are harbored in the genomes of pathogens. We have shown previously that the mode of action of this toxin is distinct from the majority derived from toxin-antitoxin systems: it does not cleave RNA; in fact P1 Doc expression leads to mRNA stabilization. However, the molecular triggers that lead to translation arrest are not understood. The presence of a Fic domain, albeit slightly altered in length and at the catalytic site, provided a clue to the mechanism of P1 Doc action, as most proteins with this conserved domain inactivate GTPases through addition of an adenylyl group (also referred to as AMPylation). We demonstrated that P1 Doc added a single phosphate group to the essential translation elongation factor and GTPase, elongation factor (EF)-Tu. The phosphorylation site was at a highly conserved threonine, Thr-382, which was blocked when EF-Tu was treated with the antibiotic kirromycin. Therefore, we have established that Fic domain proteins can function as kinases. This distinct enzymatic activity exhibited by P1 Doc also solves the mystery of the degenerate Fic motif unique to the Doc family of toxins. Moreover, we have established that all characterized Fic domain proteins, even those that phosphorylate, target pivotal GTPases for inactivation through a post-translational modification at a single functionally critical acceptor site.

Isotope-geochemical studies on fractions of dissolved organic carbon (DOC) for determining the origin and evolution of DOC for purposes of groundwater dating

International Nuclear Information System (INIS)

Geyer, S.

1994-01-01

The laboratory work consisted in developing and testing methods of extraction and enrichment of individual high-purity DOC fractions (fulvic acids, humic acids, and low-molecular substances) with the aim of preparing large quantities of groundwaters (> 1000 l) with low DOC concentrations so as to obtain sufficient sampling material. Chemical characterisation of DOC consisted in an analysis of humic and fulvic acids with regard to element composition (C, H, N, O, S) and inorganic trace elements. Isotopic characterization of the DOC fractions consisted in determining 14 C, 13 C, and 2 H levels. For the first time δ 34 S and δ 15 N relations in humic and fulvic acids dissolved in groundwater were determined. (orig./DG) [de

Google Docs in an Out-of-Class Collaborative Writing Activity

Science.gov (United States)

Zhou, Wenyi; Simpson, Elizabeth; Domizi, Denise Pinette

2012-01-01

Google Docs, an online word processing application, is a promising tool for collaborative learning. However, many college instructors and students lack knowledge to effectively use Google Docs to enhance teaching and learning. Goals of this study include (1) assessing the effectiveness of using Google Docs in an out-of-class collaborative writing…

Removal of terrestrial DOC in aquatic ecosystems of a temperate river network

Science.gov (United States)

Wollheim, W.M.; Stewart, R. J.; Aiken, George R.; Butler, Kenna D.; Morse, Nathaniel B.; Salisbury, J.

2015-01-01

Surface waters play a potentially important role in the global carbon balance. Dissolved organic carbon (DOC) fluxes are a major transfer of terrestrial carbon to river systems, and the fate of DOC in aquatic systems is poorly constrained. We used a unique combination of spatially distributed sampling of three DOC fractions throughout a river network and modeling to quantify the net removal of terrestrial DOC during a summer base flow period. We found that aquatic reactivity of terrestrial DOC leading to net loss is low, closer to conservative chloride than to reactive nitrogen. Net removal occurred mainly from the hydrophobic organic acid fraction, while hydrophilic and transphilic acids showed no net change, indicating that partitioning of bulk DOC into different fractions is critical for understanding terrestrial DOC removal. These findings suggest that river systems may have only a modest ability to alter the amounts of terrestrial DOC delivered to coastal zones.

Profiling adrenal 11β-hydroxyandrostenedione metabolites in prostate cancer cells, tissue and plasma: UPC2-MS/MS quantification of 11β-hydroxytestosterone, 11keto-testosterone and 11keto-dihydrotestosterone.

Science.gov (United States)

du Toit, Therina; Bloem, Liezl M; Quanson, Jonathan L; Ehlers, Riaan; Serafin, Antonio M; Swart, Amanda C

2017-02-01

Adrenal C 19 steroids serve as precursors to active androgens in the prostate. Androstenedione (A4), 11β-hydroxyandrostenedione (11OHA4) and 11β-hydroxytestosterone (11OHT) are metabolised to potent androgen receptor (AR) agonists, dihydrotestosterone (DHT), 11-ketotestosterone (11KT) and 11-ketodihydrotestosterone (11KDHT). The identification of 11OHA4 metabolites, 11KT and 11KDHT, as active androgens has placed a new perspective on adrenal C11-oxy C 19 steroids and their contribution to prostate cancer (PCa). We investigated adrenal androgen metabolism in normal epithelial prostate (PNT2) cells and in androgen-dependent prostate cancer (LNCaP) cells. We also analysed steroid profiles in PCa tissue and plasma, determining the presence of the C 19 steroids and their derivatives using ultra-performance liquid chromatography (UHPLC)- and ultra-performance convergence chromatography tandem mass spectrometry (UPC 2 -MS/MS). In PNT2 cells, sixty percent A4 (60%) was primarily metabolised to 5α-androstanedione (5αDIONE) (40%), testosterone (T) (10%), and androsterone (AST) (10%). T (30%) was primarily metabolised to DHT (10%) while low levels of A4, 5αDIONE and 3αADIOL (≈20%) were detected. Conjugated steroids were not detected and downstream products were present at <0.05μM. Only 20% of 11OHA4 and 11OHT were metabolised with the former yielding 11keto-androstenedione (11KA4), 11KDHT and 11β-hydroxy-5α-androstanedione (11OH-5αDIONE) and the latter yielding 11OHA4, 11KT and 11KDHT with downstream products <0.03μM. In LNCaP cells, A4 (90%) was metabolised to AST-glucuronide via the alternative pathway while T was detected as T-glucuronide with negligible conversion to downstream products. 11OHA4 (80%) and 11OHT (60%) were predominantly metabolised to 11KA4 and 11KT and in both assays more than 50% of 11KT was detected in the unconjugated form. In tissue, we detected C11-oxy C 19 metabolites at significantly higher levels than the C 19 steroids, with

Assessing the relative bioavailability of DOC in regional groundwater systems

Science.gov (United States)

Chapelle, Francis H.; Bradley, Paul M.; Journey, Celeste A.; McMahon, Peter B.

2013-01-01

It has been hypothesized that the degree to which a hyperbolic relationship exists between concentrations of dissolved organic carbon (DOC) and dissolved oxygen (DO) in groundwater may indicate the relative bioavailability of DOC. This hypothesis was examined for 73 different regional aquifers of the United States using 7745 analyses of groundwater compiled by the National Water Assessment (NAWQA) program of the U.S. Geological Survey. The relative reaction quotient (RRQ), a measure of the curvature of DOC concentrations plotted versus DO concentrations and regressed to a decaying hyperbolic equation, was used to assess the relative bioavailability of DOC. For the basalt aquifer of Oahu, Hawaii, RRQ values were low (0.0013 mM−2), reflecting a nearly random relationship between DOC and DO concentrations. In contrast, on the island of Maui, treated sewage effluent injected into a portion of the basalt aquifer resulted in pronounced hyperbolic DOC-DO behavior and a higher RRQ (142 mM−2). RRQ values for the 73 aquifers correlated positively with mean concentrations of ammonia, dissolved iron, and manganese, and correlated negatively with mean pH. This indicates that greater RRQ values are associated with greater concentrations of the final products of microbial reduction reactions. RRQ values and DOC concentrations were negatively correlated with the thickness of the unsaturated zone (UNST) and depth to the top of the screened interval. Finally, RRQ values were positively correlated with mean annual precipitation (MAP), and the highest observed RRQ values were associated with aquifers receiving MAP rates ranging between 900 and 1300 mm/year. These results are uniformly consistent with the hypothesis that the hyperbolic behavior of DOC-DO plots, as quantified by the RRQ metric, can be an indicator of relative DOC bioavailability in groundwater systems.

Assessing the relative bioavailability of DOC in regional groundwater systems.

Science.gov (United States)

Chapelle, Francis H; Bradley, Paul M; Journey, Celeste A; McMahon, Peter B

2013-01-01

It has been hypothesized that the degree to which a hyperbolic relationship exists between concentrations of dissolved organic carbon (DOC) and dissolved oxygen (DO) in groundwater may indicate the relative bioavailability of DOC. This hypothesis was examined for 73 different regional aquifers of the United States using 7745 analyses of groundwater compiled by the National Water Assessment (NAWQA) program of the U.S. Geological Survey. The relative reaction quotient (RRQ), a measure of the curvature of DOC concentrations plotted versus DO concentrations and regressed to a decaying hyperbolic equation, was used to assess the relative bioavailability of DOC. For the basalt aquifer of Oahu, Hawaii, RRQ values were low (0.0013 mM(-2)), reflecting a nearly random relationship between DOC and DO concentrations. In contrast, on the island of Maui, treated sewage effluent injected into a portion of the basalt aquifer resulted in pronounced hyperbolic DOC-DO behavior and a higher RRQ (142 mM(-2)). RRQ values for the 73 aquifers correlated positively with mean concentrations of ammonia, dissolved iron, and manganese, and correlated negatively with mean pH. This indicates that greater RRQ values are associated with greater concentrations of the final products of microbial reduction reactions. RRQ values and DOC concentrations were negatively correlated with the thickness of the unsaturated zone (UNST) and depth to the top of the screened interval. Finally, RRQ values were positively correlated with mean annual precipitation (MAP), and the highest observed RRQ values were associated with aquifers receiving MAP rates ranging between 900 and 1300 mm/year. These results are uniformly consistent with the hypothesis that the hyperbolic behavior of DOC-DO plots, as quantified by the RRQ metric, can be an indicator of relative DOC bioavailability in groundwater systems. Published 2012. This article is a U.S. Government work and is in the public domain in the USA.

Doc Toxin Is a Kinase That Inactivates Elongation Factor Tu*

Science.gov (United States)

Cruz, Jonathan W.; Rothenbacher, Francesca P.; Maehigashi, Tatsuya; Lane, William S.; Dunham, Christine M.; Woychik, Nancy A.

2014-01-01

The Doc toxin from bacteriophage P1 (of the phd-doc toxin-antitoxin system) has served as a model for the family of Doc toxins, many of which are harbored in the genomes of pathogens. We have shown previously that the mode of action of this toxin is distinct from the majority derived from toxin-antitoxin systems: it does not cleave RNA; in fact P1 Doc expression leads to mRNA stabilization. However, the molecular triggers that lead to translation arrest are not understood. The presence of a Fic domain, albeit slightly altered in length and at the catalytic site, provided a clue to the mechanism of P1 Doc action, as most proteins with this conserved domain inactivate GTPases through addition of an adenylyl group (also referred to as AMPylation). We demonstrated that P1 Doc added a single phosphate group to the essential translation elongation factor and GTPase, elongation factor (EF)-Tu. The phosphorylation site was at a highly conserved threonine, Thr-382, which was blocked when EF-Tu was treated with the antibiotic kirromycin. Therefore, we have established that Fic domain proteins can function as kinases. This distinct enzymatic activity exhibited by P1 Doc also solves the mystery of the degenerate Fic motif unique to the Doc family of toxins. Moreover, we have established that all characterized Fic domain proteins, even those that phosphorylate, target pivotal GTPases for inactivation through a post-translational modification at a single functionally critical acceptor site. PMID:24448800

Trends in soil solution dissolved organic carbon (DOC) concentrations across European forests

NARCIS (Netherlands)

Camino-Serrano, Marta; Graf Pannatier, Elisabeth; Vicca, Sara; Luyssaert, Sebastiaan; Jonard, Mathieu; Ciais, Philippe; Guenet, Bertrand; Gielen, Bert; Peñuelas, Josep; Sardans, Jordi; Waldner, Peter; Sawicka, Kasia

2016-01-01

Dissolved organic carbon (DOC) in surface waters is connected to DOC in soil solution through hydrological pathways. Therefore, it is expected that long-term dynamics of DOC in surface waters reflect DOC trends in soil solution. However, a multitude of site studies have failed so far to establish

Trends in soil solution dissolved organic carbon (DOC) concentrations across European forests

NARCIS (Netherlands)

Camino-Serrano, M.; Graf Pannatier, E.; Vicca, S.; Luyssaert, S.; Jonard, M.; Ciais, P.; Guenet, B.; Gielen, B.; Peñuelas, J.; Sardans, J.; Waldner, P.; Etzold, S.; Cecchini, G.; Clarke, N.; Galić, Z.; Gandois, L.; Hansen, K.; Johnson, J.; Klinck, U.; Lachmanová, Z.; Lindroos, A.J.; Meesenburg, H.; Nieminen, T.M.; Sanders, T.G.M.; Sawicka, K.; Seidling, W.; Thimonier, A.; Vanguelova, E.; Verstraeten, A.; Vesterdal, L.; Janssens, I.A.

2016-01-01

Dissolved organic carbon (DOC) in surface waters is connected to DOC in soil solution through hydrological pathways. Therefore, it is expected that long-term dynamics of DOC in surface waters reflect DOC trends in soil solution. However, a multitude of site studies have failed so far to establish

Rapid solid-phase extraction method to quantify [11C]-verapamil, and its [11C]-metabolites, in human and macaque plasma

International Nuclear Information System (INIS)

Unadkat, Jashvant D.; Chung, Francisco; Sasongko, Lucy; Whittington, Dale; Eyal, Sara; Mankoff, David; Collier, Ann C.; Muzi, Mark; Link, Jeanne

2008-01-01

Introduction: P-glycoprotein (P-gp), an efflux transporter, is a significant barrier to drug entry into the brain and the fetus. The positron emission tomography (PET) ligand, [ 11 C]-verapamil, has been used to measure in vivo P-gp activity at various tissue-blood barriers of humans and animals. Since verapamil is extensively metabolized in vivo, it is important to quantify the extent of verapamil metabolism in order to interpret such P-gp activity. Therefore, we developed a rapid solid-phase extraction (SPE) method to separate, and then quantify, verapamil and its radiolabeled metabolites in plasma. Methods: Using high-performance liquid chromatography (HPLC), we established that the major identifiable circulating radioactive metabolite of [ 11 C]-verapamil in plasma of humans and the nonhuman primate, Macaca nemestrina, was [ 11 C]-D-617/717. Using sequential and differential pH elution on C 8 SPE cartridges, we developed a rapid method to separate [ 11 C]-verapamil and [ 11 C]-D-617/717. Recovery was measured by spiking the samples with the corresponding nonradioactive compounds and assaying these compounds by HPLC. Results: Verapamil and D-617/717 recovery with the SPE method was >85%. When the method was applied to PET studies in humans and nonhuman primates, significant plasma concentration of D-617/717 and unknown polar metabolite(s) were observed. The SPE and the HPLC methods were not significantly different in the quantification of verapamil and D-617/717. Conclusions: The SPE method simultaneously processes multiple samples in less than 5 min. Given the short half-life of [ 11 C], this method provides a valuable tool to rapidly determine the concentration of [ 11 C]-verapamil and its [ 11 C]-metabolites in human and nonhuman primate plasma

Evolution of ligand specificity in vertebrate corticosteroid receptors

Directory of Open Access Journals (Sweden)

Deitcher David L

2011-01-01

Full Text Available Abstract Background Corticosteroid receptors include mineralocorticoid (MR and glucocorticoid (GR receptors. Teleost fishes have a single MR and duplicate GRs that show variable sensitivities to mineralocorticoids and glucocorticoids. How these receptors compare functionally to tetrapod MR and GR, and the evolutionary significance of maintaining two GRs, remains unclear. Results We used up to seven steroids (including aldosterone, cortisol and 11-deoxycorticosterone [DOC] to compare the ligand specificity of the ligand binding domains of corticosteroid receptors between a mammal (Mus musculus and the midshipman fish (Porichthys notatus, a teleost model for steroid regulation of neural and behavioral plasticity. Variation in mineralocorticoid sensitivity was considered in a broader phylogenetic context by examining the aldosterone sensitivity of MR and GRs from the distantly related daffodil cichlid (Neolamprologus pulcher, another teleost model for neurobehavioral plasticity. Both teleost species had a single MR and duplicate GRs. All MRs were sensitive to DOC, consistent with the hypothesis that DOC was the initial ligand of the ancestral MR. Variation in GR steroid-specificity corresponds to nine identified amino acid residue substitutions rather than phylogenetic relationships based on receptor sequences. Conclusion The mineralocorticoid sensitivity of duplicate GRs in teleosts is highly labile in the context of their evolutionary phylogeny, a property that likely led to neo-functionalization and maintenance of two GRs.

Comment on 'Instability of the Shukla mode in a dusty plasma containing equilibrium density and magnetic field inhomogeneities' [Phys. Plasmas 11, 1732 (2004)] and 'New resonance and cut-off for low-frequency electromagnetic waves in dusty magnetoplasmas' [Phys. Plasmas 11, 2307 (2004)

International Nuclear Information System (INIS)

Rudakov, Leonid

2004-01-01

It is shown that the oscillation named by Shukla as the 'Shukla mode' is well known in the plasma physics literature as the magnetic drift wave. In addition, the instability of these modes in a cold plasma as claimed by Shukla et al. [Phys. Plasmas 11, 1732 (2004)] does not exist and is due to a mathematical error in their analysis. Also the 'new' resonance and new cutoff frequencies claimed by Shukla et al. and Mamum et al. [Phys Plasmas 11, 2307 (2004)] have been known in the published literature for decades

Enhanced DOC removal using anion and cation ion exchange resins.

Science.gov (United States)

Arias-Paic, Miguel; Cawley, Kaelin M; Byg, Steve; Rosario-Ortiz, Fernando L

2016-01-01

Hardness and DOC removal in a single ion exchange unit operation allows for less infrastructure, is advantageous for process operation and depending on the water source, could enhance anion exchange resin removal of dissolved organic carbon (DOC). Simultaneous application of cationic (Plus) and anionic (MIEX) ion exchange resin in a single contact vessel was tested at pilot and bench scales, under multiple regeneration cycles. Hardness removal correlated with theoretical predictions; where measured hardness was between 88 and 98% of the predicted value. Comparing bench scale DOC removal of solely treating water with MIEX compared to Plus and MIEX treated water showed an enhanced DOC removal, where removal was increased from 0.5 to 1.25 mg/L for the simultaneous resin application compared to solely applying MIEX resin. A full scale MIEX treatment plant (14.5 MGD) reduced raw water DOC from 13.7 mg/L to 4.90 mg/L in the treated effluent at a bed volume (BV) treatment rate of 800, where a parallel operation of a simultaneous MIEX and Plus resin pilot (10 gpm) measured effluent DOC concentrations of no greater than 3.4 mg/L, even at bed volumes of treatment 37.5% greater than the full scale plant. MIEX effluent compared to simultaneous Plus and MIEX effluent resulted in differences in fluorescence intensity that correlated to decreases in DOC concentration. The simultaneous treatment of Plus and MIEX resin produced water with predominantly microbial character, indicating the enhanced DOC removal was principally due to increased removal of terrestrially derived organic matter. The addition of Plus resin to a process train with MIEX resin allows for one treatment process to remove both DOC and hardness, where a single brine waste stream can be sent to sewer at a full-scale plant, completely removing lime chemical addition and sludge waste disposal for precipitative softening processes. Published by Elsevier Ltd.

Non-linear, connectivity and threshold-dominated runoff-generation controls DOC and heavy metal export in a small peat catchment

Science.gov (United States)

Birkel, Christian; Broder, Tanja; Biester, Harald

2017-04-01

exported less DOC (115 kg C ha-1 yr-1 ± 11 kg C ha-1 yr-1) compared to the equivalent but wetter period in 2014 (189 kg C ha-1 yr-1 ± 38 kg C ha-1 yr-1). The exceedance of a critical water table threshold (-10 cm) triggered a rapid near-surface runoff response with associated higher DOC transport connecting all available DOC pools, and with subsequent dilution. We conclude that the combination of detailed experimental work with relatively simple, coupled hydrology-biogeochemistry models allowed not only the model to be internally constrained, but also provided important insight into how DOC and tightly coupled heavy metals are mobilized.

Insights and issues with simulating terrestrial DOC loading of Arctic river networks.

Science.gov (United States)

Kicklighter, David W; Hayes, Daniel J; McClelland, James W; Peterson, Bruce J; McGuire, A David; Melillo, Jerry M

2013-12-01

Terrestrial carbon dynamics influence the contribution of dissolved organic carbon (DOC) to river networks in addition to hydrology. In this study, we use a biogeochemical process model to simulate the lateral transfer of DOC from land to the Arctic Ocean via riverine transport. We estimate that, over the 20th century, the pan-Arctic watershed has contributed, on average, 32 Tg C/yr of DOC to river networks emptying into the Arctic Ocean with most of the DOC coming from the extensive area of boreal deciduous needle-leaved forests and forested wetlands in Eurasian watersheds. We also estimate that the rate of terrestrial DOC loading has been increasing by 0.037 Tg C/yr2 over the 20th century primarily as a result of climate-induced increases in water yield. These increases have been offset by decreases in terrestrial DOC loading caused by wildfires. Other environmental factors (CO2 fertilization, ozone pollution, atmospheric nitrogen deposition, timber harvest, agriculture) are estimated to have relatively small effects on terrestrial DOC loading to Arctic rivers. The effects of the various environmental factors on terrestrial carbon dynamics have both offset and enhanced concurrent effects on hydrology to influence terrestrial DOC loading and may be changing the relative importance of terrestrial carbon dynamics on this carbon flux. Improvements in simulating terrestrial DOC loading to pan-Arctic rivers in the future will require better information on the production and consumption of DOC within the soil profile, the transfer of DOC from land to headwater streams, the spatial distribution of precipitation and its temporal trends, carbon dynamics of larch-dominated ecosystems in eastern Siberia, and the role of industrial organic effluents on carbon budgets of rivers in western Russia.

Insights and issues with simulating terrestrial DOC loading of Arctic river networks

Science.gov (United States)

Kicklighter, David W.; Hayes, Daniel J.; McClelland, James W.; Peterson, Bruce J.; McGuire, A. David; Melillo, Jerry M.

2013-01-01

Terrestrial carbon dynamics influence the contribution of dissolved organic carbon (DOC) to river networks in addition to hydrology. In this study, we use a biogeochemical process model to simulate the lateral transfer of DOC from land to the Arctic Ocean via riverine transport. We estimate that, over the 20th century, the pan-Arctic watershed has contributed, on average, 32 Tg C/yr of DOC to river networks emptying into the Arctic Ocean with most of the DOC coming from the extensive area of boreal deciduous needle-leaved forests and forested wetlands in Eurasian watersheds. We also estimate that the rate of terrestrial DOC loading has been increasing by 0.037 Tg C/yr2 over the 20th century primarily as a result of climate-induced increases in water yield. These increases have been offset by decreases in terrestrial DOC loading caused by wildfires. Other environmental factors (CO2 fertilization, ozone pollution, atmospheric nitrogen deposition, timber harvest, agriculture) are estimated to have relatively small effects on terrestrial DOC loading to Arctic rivers. The effects of the various environmental factors on terrestrial carbon dynamics have both offset and enhanced concurrent effects on hydrology to influence terrestrial DOC loading and may be changing the relative importance of terrestrial carbon dynamics on this carbon flux. Improvements in simulating terrestrial DOC loading to pan-Arctic rivers in the future will require better information on the production and consumption of DOC within the soil profile, the transfer of DOC from land to headwater streams, the spatial distribution of precipitation and its temporal trends, carbon dynamics of larch-dominated ecosystems in eastern Siberia, and the role of industrial organic effluents on carbon budgets of rivers in western Russia.

Modelling impacts of temperature, and acidifying and eutrophying deposition on DOC trends

Science.gov (United States)

Sawicka, Kasia; Rowe, Ed; Evans, Chris; Monteith, Don; Vanguelova, Elena; Wade, Andrew; Clark, Joanna

2017-04-01

Surface water dissolved organic carbon (DOC) concentrations in large parts of the northern hemisphere have risen over the past three decades, raising concern about enhanced contributions of carbon to the atmosphere and seas and oceans. The effect of declining acid deposition has been identified as a key control on DOC trends in soil and surface waters, since pH and ionic strength affect sorption and desorption of DOC. However, since DOC is derived mainly from recently-fixed carbon, and organic matter decomposition rates are considered sensitive to temperature, uncertainty persists regarding the extent to the relative importance of different drivers that affect these upward trends. We ran the dynamic model MADOC (Model of Acidity and Soil Organic Carbon) for a range of UK soils (podzols, gleysols and peatland), for which the time-series were available, to consider the likely relative importance of decreased deposition of sulphate and chloride, accumulation of reactive N, and higher temperatures, on DOC production in different soils. Modelled patterns of DOC change generally agreed favourably with measurements collated over 10-20 years, but differed markedly between sites. While the acidifying effect of sulphur deposition appeared to be the predominant control on the observed soil water DOC trends in all the soils considered other than a blanket peat, the model suggested that over the long term, the effects of nitrogen deposition on N-limited soils may have been sufficient to elevate the DOC recovery trajectory significantly. The second most influential cause of rising DOC in the model simulations was N deposition in ecosystems that are N-limited and respond with stimulated plant growth. Although non-marine chloride deposition made some contribution to acidification and recovery, it was not amongst the main drivers of DOC change. Warming had almost no effect on modelled historic DOC trends, but may prove to be a significant driver of DOC in future via its influence

Characterisation of DOC and its relation to the deep terrestrial biosphere

Science.gov (United States)

Vieth, Andrea; Vetter, Alexandra; Sachse, Anke; Horsfield, Brian

2010-05-01

-rich layers like coals and source rocks which may provide carbon sources for the deep biosphere by leaching water soluble organic compounds. We investigated the potential of a series of Eocene-Pleistocene coals, mudstones and sandstones from New Zealand with different maturities (Ro between 0.29 and 0.39) and total organic carbon content (TOC) regarding their potential to release such compounds. The water extraction of these New Zealand coals using Soxhlet apparatus resulted in yields of LMWOA that may feed the local deep terrestrial biosphere over geological periods of time (VIETH et al., 2008). However, the DOC of the water extracts mainly consisted of humic substances. To investigate the effect of thermal maturity of the organic matter as well as the effect of the organic matter type on the extraction yields, we examined additional coal samples (Ro between 0.29 and 0.80) and source rock samples from low to medium maturity (Ro between 0.3 to 1.1). Within our presentation we would like to show the compositional diversity and variability of dissolved organic compounds in natural formation fluids as well as in water extracts from a series of very different lithologies and discuss their effects on the carbon cycling in the deep terrestrial subsurface. References: Andrews, J. N., Youngman, M. J., Goldbrunner, J. E., and Darling, W. G., 1987. The geochemistry of formation waters in the Molasse Basin of Upper Austria. Environmental Geology 10, 43-57. Vieth, A., Mangelsdorf, K., Sykes, R., and Horsfield, B., 2008. Water extraction of coals - potential to estimate low molecular weight organic acids as carbon feedstock for the deep terrestrial biosphere? Organic Geochemistry 39, 985-991.

48 CFR 1323.404-70 - DOC affirmative procurement program.

Science.gov (United States)

2010-10-01

... 48 Federal Acquisition Regulations System 5 2010-10-01 2010-10-01 false DOC affirmative procurement program. 1323.404-70 Section 1323.404-70 Federal Acquisition Regulations System DEPARTMENT OF..., OCCUPATIONAL SAFETY, AND DRUG-FREE WORKPLACE Use of Recovered Materials 1323.404-70 DOC affirmative procurement...

Endogenous synthesis of corticosteroids in the hippocampus.

Directory of Open Access Journals (Sweden)

Shimpei Higo

Full Text Available BACKGROUND: Brain synthesis of steroids including sex-steroids is attracting much attention. The endogenous synthesis of corticosteroids in the hippocampus, however, has been doubted because of the inability to detect deoxycorticosterone (DOC synthase, cytochrome P450(c21. METHODOLOGY/PRINCIPAL FINDINGS: The expression of P450(c21 was demonstrated using mRNA analysis and immmunogold electron microscopic analysis in the adult male rat hippocampus. DOC production from progesterone (PROG was demonstrated by metabolism analysis of (3H-steroids. All the enzymes required for corticosteroid synthesis including P450(c21, P450(2D4, P450(11β1 and 3β-hydroxysteroid dehydrogenase (3β-HSD were localized in the hippocampal principal neurons as shown via in situ hybridization and immunoelectron microscopic analysis. Accurate corticosteroid concentrations in rat hippocampus were determined by liquid chromatography-tandem mass spectrometry. In adrenalectomized rats, net hippocampus-synthesized corticosterone (CORT and DOC were determined to 6.9 and 5.8 nM, respectively. Enhanced spinogenesis was observed in the hippocampus following application of low nanomolar (10 nM doses of CORT for 1 h. CONCLUSIONS/SIGNIFICANCE: These results imply the complete pathway of corticosteroid synthesis of 'pregnenolone →PROG→DOC→CORT' in the hippocampal neurons. Both P450(c21 and P450(2D4 can catalyze conversion of PROG to DOC. The low nanomolar level of CORT synthesized in hippocampal neurons may play a role in modulation of synaptic plasticity, in contrast to the stress effects by micromolar CORT from adrenal glands.

Reliability and Validity of the Dyadic Observed Communication Scale (DOCS).

Science.gov (United States)

Hadley, Wendy; Stewart, Angela; Hunter, Heather L; Affleck, Katelyn; Donenberg, Geri; Diclemente, Ralph; Brown, Larry K

2013-02-01

We evaluated the reliability and validity of the Dyadic Observed Communication Scale (DOCS) coding scheme, which was developed to capture a range of communication components between parents and adolescents. Adolescents and their caregivers were recruited from mental health facilities for participation in a large, multi-site family-based HIV prevention intervention study. Seventy-one dyads were randomly selected from the larger study sample and coded using the DOCS at baseline. Preliminary validity and reliability of the DOCS was examined using various methods, such as comparing results to self-report measures and examining interrater reliability. Results suggest that the DOCS is a reliable and valid measure of observed communication among parent-adolescent dyads that captures both verbal and nonverbal communication behaviors that are typical intervention targets. The DOCS is a viable coding scheme for use by researchers and clinicians examining parent-adolescent communication. Coders can be trained to reliably capture individual and dyadic components of communication for parents and adolescents and this complex information can be obtained relatively quickly.

Automatisierte Artikelbestellverwaltung: Doctor-Doc – ein bibliothekarisches Verwaltungswerkzeug / Automation in Interlibrary Loan: Doctor-Doc – a tool for librarians

Directory of Open Access Journals (Sweden)

Fischer, Markus

2010-05-01

Full Text Available Interlibrary loan has always been an important service to supplement own library holdings.To organize and standardize the order process of journal articles for 6 hospitals, we did create an online tool for the Solothurner Spitäler AG. The resulting application is available for libraries free of charge under http://www.doctor-doc.com/. The application is maintained and will be further developed by an association founded specially for this purpose. Doctor-Doc is not a supplier of articles, but rather a platform to organize orders at existing suppliers like Subito, British Library or any other supplying libraries. Doctor-Doc is OpenURL compliant and is able to resolve identifiers like PMIDs. In combination with an existing account from the german EZB, libraries can use the application as a linkresolver.The application has become an essential tool to efficiently manage interlibrary loan for the Solothurner Spitäler AG. The tool is also used by many libraries in Germany and Switzerland.

DOC concentrations across a depth-dependent light gradient on a Caribbean coral reef

Directory of Open Access Journals (Sweden)

Benjamin Mueller

2017-06-01

Full Text Available Photosynthates released by benthic primary producers (BPP, such as reef algae and scleractinian corals, fuel the dissolved organic carbon (DOC production on tropical coral reefs. DOC concentrations near BPP have repeatedly been observed to be elevated compared to those in the surrounding water column. As the DOC release of BPP increases with increasing light availability, elevated DOC concentrations near them will, in part, also depend on light availability. Consequently, DOC concentrations are likely to be higher on the shallow, well-lit reef terrace than in deeper sections on the fore reef slope. We measured in situ DOC concentrations and light intensity in close proximity to the reef alga Dictyota sp. and the scleractinian coral Orbicella faveolata along a depth-dependent light gradient from 5 to 20 m depth and compared these to background concentrations in the water column. At 10 m (intermediate light, DOC concentrations near Dictyota sp. were elevated by 15 µmol C L−1 compared to background concentrations in the water column, but not at 5 and 20 m (high and low light, respectively, or near O. faveolata at any of the tested depths. DOC concentrations did not differ between depths and thereby light environments for any of the tested water types. However, water type and depth appear to jointly affect in situ DOC concentrations across the tested depth-dependent light gradient. Corroborative ex situ measurements of excitation pressure on photosystem II suggest that photoinhibition in Dictyota sp. is likely to occur at light intensities that are commonly present on Curaçaoan coral reefs under high light levels at 5 m depth during midday. Photoinhibition may have thereby reduced the DOC release of Dictyota sp. and DOC concentrations in its close proximity. Our results indicate that the occurrence of elevated DOC concentrations did not follow a natural light gradient across depth. Instead, a combination of multiple factors, such as water type

DOC concentrations across a depth-dependent light gradient on a Caribbean coral reef.

Science.gov (United States)

Mueller, Benjamin; Meesters, Erik H; van Duyl, Fleur C

2017-01-01

Photosynthates released by benthic primary producers (BPP), such as reef algae and scleractinian corals, fuel the dissolved organic carbon (DOC) production on tropical coral reefs. DOC concentrations near BPP have repeatedly been observed to be elevated compared to those in the surrounding water column. As the DOC release of BPP increases with increasing light availability, elevated DOC concentrations near them will, in part, also depend on light availability. Consequently, DOC concentrations are likely to be higher on the shallow, well-lit reef terrace than in deeper sections on the fore reef slope. We measured in situ DOC concentrations and light intensity in close proximity to the reef alga Dictyota sp. and the scleractinian coral Orbicella faveolata along a depth-dependent light gradient from 5 to 20 m depth and compared these to background concentrations in the water column. At 10 m (intermediate light), DOC concentrations near Dictyota sp. were elevated by 15 µmol C L -1 compared to background concentrations in the water column, but not at 5 and 20 m (high and low light, respectively), or near O. faveolata at any of the tested depths. DOC concentrations did not differ between depths and thereby light environments for any of the tested water types. However, water type and depth appear to jointly affect in situ DOC concentrations across the tested depth-dependent light gradient. Corroborative ex situ measurements of excitation pressure on photosystem II suggest that photoinhibition in Dictyota sp. is likely to occur at light intensities that are commonly present on Curaçaoan coral reefs under high light levels at 5 m depth during midday. Photoinhibition may have thereby reduced the DOC release of Dictyota sp. and DOC concentrations in its close proximity. Our results indicate that the occurrence of elevated DOC concentrations did not follow a natural light gradient across depth. Instead, a combination of multiple factors, such as water type, light

Irrigation of DOC-rich liquid promotes potential denitrification rate and decreases N

NARCIS (Netherlands)

Qin, Shuping; Hu, Chunsheng; Clough, Tim J.; Luo, Jiafa; Oenema, Oene; Zhou, Shungui

2017-01-01

Lack of dissolved organic carbon (DOC) is generally one of the key factors limiting denitrification in subsoil beneath the root zone. Despite a number of laboratory DOC amendment studies, the effects of in situ DOC infiltration on subsoil denitrification, and on subsequent end product

Link between DOC in near surface peat and stream water in an upland catchment.

Science.gov (United States)

Clark, Joanna M; Lane, Stuart N; Chapman, Pippa J; Adamson, John K

2008-10-15

Hydrologic transport of dissolved organic carbon (DOC) from peat soils may differ to organo-mineral soils in how they responded to changes in flow, because of differences in soil profile and hydrology. In well-drained organo-mineral soils, low flow is through the lower mineral layer where DOC is absorbed and high flow is through the upper organic layer where DOC is produced. DOC concentrations in streams draining organo-mineral soils typically increase with flow. In saturated peat soils, both high and low flows are through an organic layer where DOC is produced. Therefore, DOC in stream water draining peat may not increase in response to changes in flow as there is no switch in flow path between a mineral and organic layer. To verify this, we conducted a high-resolution monitoring study of soil and stream water at an upland peat catchment in northern England. Our data showed a strong positive correlation between DOC concentrations at -1 and -5 cm depth and stream water, and weaker correlations between concentrations at -20 to -50 cm depth and stream water. Although near surface organic material appears to be the key source of stream water DOC in both peat and organo-mineral soils, we observed a negative correlation between stream flow and DOC concentrations instead of a positive correlation as DOC released from organic layers during low and high flow was diluted by rainfall. The differences in DOC transport processes between peat and organo-mineral soils have different implications for our understanding of long-term changes in DOC exports. While increased rainfall may cause an increase in DOC flux from peat due to an increase in water volume, it may cause a decrease in concentrations. This response is contrary to expected changes in DOC exports from organo-mineral soils, where increase rainfall is likely to result in an increase in flux and concentration.

Quantifying tropical peatland dissolved organic carbon (DOC) using UV-visible spectroscopy.

Science.gov (United States)

Cook, Sarah; Peacock, Mike; Evans, Chris D; Page, Susan E; Whelan, Mick J; Gauci, Vincent; Kho, Lip Khoon

2017-05-15

UV-visible spectroscopy has been shown to be a useful technique for determining dissolved organic carbon (DOC) concentrations. However, at present we are unaware of any studies in the literature that have investigated the suitability of this approach for tropical DOC water samples from any tropical peatlands, although some work has been performed in other tropical environments. We used water samples from two oil palm estates in Sarawak, Malaysia to: i) investigate the suitability of both single and two-wavelength proxies for tropical DOC determination; ii) develop a calibration dataset and set of parameters to calculate DOC concentrations indirectly; iii) provide tropical researchers with guidance on the best spectrophotometric approaches to use in future analyses of DOC. Both single and two-wavelength model approaches performed well with no one model significantly outperforming the other. The predictive ability of the models suggests that UV-visible spectroscopy is both a viable and low cost method for rapidly analyzing DOC in water samples immediately post-collection, which can be important when working at remote field sites with access to only basic laboratory facilities. Copyright © 2017 The Authors. Published by Elsevier Ltd.. All rights reserved.

Rapid solid-phase extraction method to quantify [{sup 11}C]-verapamil, and its [{sup 11}C]-metabolites, in human and macaque plasma

Energy Technology Data Exchange (ETDEWEB)

Unadkat, Jashvant D. [Department of Pharmaceutics, University of Washington, Box 357610, Seattle, WA 98195 (United States)], E-mail: jash@u.washington.edu; Chung, Francisco; Sasongko, Lucy; Whittington, Dale; Eyal, Sara [Department of Pharmaceutics, University of Washington, Box 357610, Seattle, WA 98195 (United States); Mankoff, David [Department of Radiology, University of Washington, Box 356004, Seattle, WA 98195 (United States); Collier, Ann C. [Department of Medicine, University of Washington, Box 359929, Seattle, WA 98195 (United States); Muzi, Mark; Link, Jeanne [Department of Radiology, University of Washington, Box 356004, Seattle, WA 98195 (United States)

2008-11-15

Introduction: P-glycoprotein (P-gp), an efflux transporter, is a significant barrier to drug entry into the brain and the fetus. The positron emission tomography (PET) ligand, [{sup 11}C]-verapamil, has been used to measure in vivo P-gp activity at various tissue-blood barriers of humans and animals. Since verapamil is extensively metabolized in vivo, it is important to quantify the extent of verapamil metabolism in order to interpret such P-gp activity. Therefore, we developed a rapid solid-phase extraction (SPE) method to separate, and then quantify, verapamil and its radiolabeled metabolites in plasma. Methods: Using high-performance liquid chromatography (HPLC), we established that the major identifiable circulating radioactive metabolite of [{sup 11}C]-verapamil in plasma of humans and the nonhuman primate, Macaca nemestrina, was [{sup 11}C]-D-617/717. Using sequential and differential pH elution on C{sub 8} SPE cartridges, we developed a rapid method to separate [{sup 11}C]-verapamil and [{sup 11}C]-D-617/717. Recovery was measured by spiking the samples with the corresponding nonradioactive compounds and assaying these compounds by HPLC. Results: Verapamil and D-617/717 recovery with the SPE method was >85%. When the method was applied to PET studies in humans and nonhuman primates, significant plasma concentration of D-617/717 and unknown polar metabolite(s) were observed. The SPE and the HPLC methods were not significantly different in the quantification of verapamil and D-617/717. Conclusions: The SPE method simultaneously processes multiple samples in less than 5 min. Given the short half-life of [{sup 11}C], this method provides a valuable tool to rapidly determine the concentration of [{sup 11}C]-verapamil and its [{sup 11}C]-metabolites in human and nonhuman primate plasma.

Sources for increased DOC-concentrations in the groundwater downstream of the landfill Hohne (DEA); Ursachen erhoehter DOC-Konzentrationen im Grundwasserabstrom am Beispiel der Deponie Hohne (DEA)

Energy Technology Data Exchange (ETDEWEB)

Bahlmann, E.; Seifert, R. [Hamburg Univ. (Germany). Inst. fuer Geologie; Eschenbach, A.; Kleinschmidt, V. [Hamburg Univ. (Germany). Inst. fuer Bodenkunde

2017-08-15

Construction waste together with drilling mud and oil-contaminated soil had been deposited in the landfill Hohne from 1971. Four groundwater monitoring sites had been installed: one monitoring site upstream and three sites downstream of the landfill in three different directions. Downstream of the landfill increased concentrations of chloride, sulphate, sodium and DOC (dissolved organic carbon) had been measured over a period of years. Particularly the source of the DOC has remained unclear. Assumptions were (i) leaking of contaminants from the landfill and degradation under the landfill by microbes or plants or (ii) leaching of DOC from the soil under the landfill caused by a change in the redox potential. The determination of the DOC source was the major subject of this study.

panMetaDocs, eSciDoc, and DOIDB - an infrastructure for the curation and publication of file-based datasets for 'GFZ Data Services'

Science.gov (United States)

Ulbricht, Damian; Elger, Kirsten; Bertelmann, Roland; Klump, Jens

2016-04-01

with metadata. The metadata editor has a user-friendly interface with nominal lists, extensive explanations, and an interactive mapping tool to provide assistance to scientists describing the data. It is possible to deposit metadata templates to fill certain fields with default values. The metadata editor generates metadata in the schemas ISO19139, NASA GCMD DIF, and DataCite and could be extended for other schemas. panMetaDocs is able to mint dataset DOIs through DOIDB, which is our component to moderate dataset DOIs issued through 'GFZ Data Services'. DOIDB accepts metadata in the schemas ISO19139, DIF, and DataCite. In addition, DOIDB provides an OAI-PMH interface to disseminate all deposited metadata to data portals. The presentation of datasets on DOI landing pages is done though XSLT stylesheet transformation of the XML-based metadata. The landing pages have been designed to meet needs of scientists. We are able to render the metadata to different layouts. Furthermore, additional information about datasets and publications is assembled into the webpage by querying public databases on the internet. The work presented here will focus on technical details of the software stack. [1] http://stats.datacite.org [2] http://www.dlib.org/dlib/january11/starr/01starr.html [3] http://www.escidoc.org [4] http://panmetadocs.sf.net [5] http://github.com/ulbricht

DOC removal paradigms in highly humic aquatic ecosystems.

Science.gov (United States)

Farjalla, Vinicius F; Amado, André M; Suhett, Albert L; Meirelles-Pereira, Frederico

2009-07-01

Dissolved humic substances (HS) usually comprise 50-80% of the dissolved organic carbon (DOC) in aquatic ecosystems. From a trophic and biogeochemical perspective, HS has been considered to be highly refractory and is supposed to accumulate in the water. The upsurge of the microbial loop paradigm and the studies on HS photo-degradation into labile DOC gave rise to the belief that microbial processing of DOC should sustain aquatic food webs in humic waters. However, this has not been extensively supported by the literature, since most HS and their photo-products are often oxidized by microbes through respiration in most nutrient-poor humic waters. Here, we review basic concepts, classical studies, and recent data on bacterial and photo-degradation of DOC, comparing the rates of these processes in highly humic ecosystems and other aquatic ecosystems. We based our review on classical and recent findings from the fields of biogeochemistry and microbial ecology, highlighting some odd results from highly humic Brazilian tropical lagoons, which can reach up to 160 mg C L(-1). Highly humic tropical lagoons showed proportionally lower bacterial production rates and higher bacterial respiration rates (i.e., lower bacterial growth efficiency) than other lakes. Zooplankton showed similar delta(13)C to microalgae but not to humic DOC in these highly humic lagoons. Thus, the data reviewed here do not support the microbial loop as an efficient matter transfer pathway in highly humic ecosystems, where it is supposed to play its major role. In addition, we found that some tropical humic ecosystems presented the highest potential DOC photo-chemical mineralization (PM) rates reported in the literature, exceeding up to threefold the rates reported for temperate humic ecosystems. We propose that these atypically high PM rates are the result of a joint effect of the seasonal dynamics of allochthonous humic DOC input to these ecosystems and the high sunlight incidence throughout the year

EDITORIAL: Special issue featuring articles arising from the 11th High-Tech Plasma Processes Conference Special issue featuring articles arising from the 11th High-Tech Plasma Processes Conference

Science.gov (United States)

Bruggeman, Peter; Degrez, Gérard; Delplancke, Marie-Paule; Gleizes, Alain

2011-05-01

The 11th High-Tech Plasma Processes Conference (HTPP) was held in Brussels, Belgium, 27 June-2 July, 2010. HTPP started as a thermal plasma conference and gradually expanded to include low-temperature plasmas. The conference was founded by Jacques Amouroux and Pierre Fauchais, and aims to bring together different scientific communities to facilitate contacts between science, technology and industry, providing a platform for the exploration of elementary processes and applications in and by plasmas. The first HTPP was held in Odeillo, France, in 1990. Since then it has been held every other year in different European cities: Paris, Aachen, Athens, Strasbourg, Saint-Petersburg, Patras and Brussels. The 11th HTPP conference was attended by 125 participants from 19 countries. The program involved 14 invited talks, 34 contributed talks, 72 posters and a software demonstration and hands-on session for plasma modelling. The 12th HTPP conference will be held 24-28 June 2012, in Bologna, Italy. A larger part of the contributions to the 11th HTPP has been published in the Journal of Physics: Conference Series (JPCS) volume 275, 2011. All invited speakers and other contributors, as selected by the Steering, Scientific and Organizing Committee, were invited to submit a paper based on their contributions for this special issue which is peer reviewed by the journal. Both this special issue and the JPCS volume aim to bring the 11th HTPP to a wider audience. The publications are a nice example of the broad topic range of the conference. The JPCS volume contains papers covering fundamental aspects on radiative processes of thermal plasmas, modelling of thermal arcs and non-thermal RF plasma jets, plasma diagnostics including flow and heat flux measurements of thermal plasmas, radical density measurements and laser-induced breakdown spectroscopy. The applications-oriented contributions of the JPCS volume include plasma spraying, synthesis of (nano-sized) materials, surface

Modeling rates of DOC degradation using DOM composition and hydroclimatic variables

Science.gov (United States)

Moody, C. S.; Worrall, F.

2017-05-01

The fluvial fluxes of dissolved organic carbon (DOC) from peatlands form an important part of that ecosystem's carbon cycle, contributing approximately 35% of the overall peatland carbon budget. The in-stream processes acting on the DOC, such as photodegradation and biodegradation, can lead to DOC loss and thus contribute CO2 to the atmosphere. The aim of this study was to understand what controls the rates of DOC degradation. Water samples from a headwater, peat-covered catchment, were collected over a 23 month period and analyzed for the DOC degradation rate and dissolved organic matter (DOM) composition in the context of hydroclimatic monitoring. Measures of DOM composition included 13C solid-state nuclear magnetic resonance spectroscopy, bomb calorimetry, and elemental analysis. Regression analysis showed that there was a significant role for the composition of the DOM in controlling degradation with degradation rates significantly increasing with the proportion of aldehyde and carboxylic acid functional groups but decreasing with the proportion of N-alkyl functional groups. The highest rates of DOC degradation occurred when aldehyde functionality was at its greatest and this occurred on the recession limb of storm hydrographs. Including this knowledge into models of fluvial carbon fate for an 818 km2 catchment gave an annual average DOC removal rate of 67% and 50% for total organic carbon, slightly lower than previously predicted. The compositional controls suggest that DOM is primarily being used as a ready energy source to the aquatic ecosystem rather than as a nutrient source.

Modelling impacts of atmospheric deposition and temperature on long-term DOC trends.

Science.gov (United States)

Sawicka, K; Rowe, E C; Evans, C D; Monteith, D T; E I Vanguelova; Wade, A J; J M Clark

2017-02-01

It is increasingly recognised that widespread and substantial increases in Dissolved organic carbon (DOC) concentrations in remote surface, and soil, waters in recent decades are linked to declining acid deposition. Effects of rising pH and declining ionic strength on DOC solubility have been proposed as potential dominant mechanisms. However, since DOC in these systems is derived mainly from recently-fixed carbon, and since organic matter decomposition rates are considered sensitive to temperature, uncertainty persists over the extent to which other drivers that could influence DOC production. Such potential drivers include fertilisation by nitrogen (N) and global warming. We therefore ran the dynamic soil chemistry model MADOC for a range of UK soils, for which time series data are available, to consider the likely relative importance of decreased deposition of sulphate and chloride, accumulation of reactive N, and higher temperatures, on soil DOC production in different soils. Modelled patterns of DOC change generally agreed favourably with measurements collated over 10-20years, but differed markedly between sites. While the acidifying effect of sulphur deposition appeared to be the predominant control on the observed soil water DOC trends in all the soils considered other than a blanket peat, the model suggested that over the long term, the effects of nitrogen deposition on N-limited soils may have been sufficient to raise the "acid recovery DOC baseline" significantly. In contrast, reductions in non-marine chloride deposition and effects of long term warming appeared to have been relatively unimportant. The suggestion that future DOC concentrations might exceed preindustrial levels as a consequence of nitrogen pollution has important implications for drinking water catchment management and the setting and pursuit of appropriate restoration targets, but findings still require validation from reliable centennial-scale proxy records, such as those being developed

Surface modification study of zirconium on exposure to fusion grade plasma in an 11.5 kJ plasma focus device

International Nuclear Information System (INIS)

Srivastava, Rohit; Niranjan, Ram; Rout, R.K.; Kaushik, T.C.; Chakravarthy, Y.; Mishra, P.

2017-01-01

In continuation of our investigation on effect of fusion grade plasma produced in an existing MEPF-12 (11.5 kJ, 40 μF, 24 kV) plasma focus (PF) facility on different materials, likely to be used in future fusion reactors, we have reported here the study on Zirconium (Zr) metal. In the present work, the Zr sample in disc (2 mm thick, 10 mm diameter) form was exposed to twenty shots of plasma focus operated at 4 mbar deuterium gas filling pressure and 11.5 kJ bank energy. The samples were placed at a distance of 6 cm from the tip of the anode in the MEPF-12 PF device. The emissions from the device comprise of deuterium ions in wide energy range (a few keV to several hundreds of keV), high temperature plasma (in general a few keV) and neutrons of 2.45 MeV energy produced due to D(D, 3 He)n fusion reactions

Photochemical mineralization of terrigenous DOC to dissolved inorganic carbon in ocean

OpenAIRE

Aarnos, Hanna; Gélinas, Yves; Kasurinen, Ville; Gu, Yufei; Puupponen, Veli-Mikko; Vähätalo, Anssi

2018-01-01

When terrigenous dissolved organic carbon (tDOC) rich in chromophoric dissolved organic matter (tCDOM) enters the ocean, solar radiation mineralizes it partially into dissolved inorganic carbon (DIC). This study addresses the amount and the rates of DIC photoproduction from tDOC and the area of ocean required to photomineralize tDOC. We collected water samples from 10 major rivers, mixed them with artificial seawater, and irradiated them with simulated solar radiation to measure DIC photoprod...

AR DOC: Augmented reality documentaries

DEFF Research Database (Denmark)

Vistisen, Peter

2014-01-01

Augmented Reality Documentaries (AR DOC) er et ’lille’ Shareplay projekt (ansøgte midler augmented reality cross media løsninger, til at skabe engagerende publikumsformidling...... indenfor oplevelsesindustrien. Projektet har genereret ny viden omkring, hvordan fysisk og digital formidling kan understøttes via Augmented Reality som formidlingsformat....

G-DOC Plus - an integrative bioinformatics platform for precision medicine.

Science.gov (United States)

Bhuvaneshwar, Krithika; Belouali, Anas; Singh, Varun; Johnson, Robert M; Song, Lei; Alaoui, Adil; Harris, Michael A; Clarke, Robert; Weiner, Louis M; Gusev, Yuriy; Madhavan, Subha

2016-04-30

G-DOC Plus is a data integration and bioinformatics platform that uses cloud computing and other advanced computational tools to handle a variety of biomedical BIG DATA including gene expression arrays, NGS and medical images so that they can be analyzed in the full context of other omics and clinical information. G-DOC Plus currently holds data from over 10,000 patients selected from private and public resources including Gene Expression Omnibus (GEO), The Cancer Genome Atlas (TCGA) and the recently added datasets from REpository for Molecular BRAin Neoplasia DaTa (REMBRANDT), caArray studies of lung and colon cancer, ImmPort and the 1000 genomes data sets. The system allows researchers to explore clinical-omic data one sample at a time, as a cohort of samples; or at the level of population, providing the user with a comprehensive view of the data. G-DOC Plus tools have been leveraged in cancer and non-cancer studies for hypothesis generation and validation; biomarker discovery and multi-omics analysis, to explore somatic mutations and cancer MRI images; as well as for training and graduate education in bioinformatics, data and computational sciences. Several of these use cases are described in this paper to demonstrate its multifaceted usability. G-DOC Plus can be used to support a variety of user groups in multiple domains to enable hypothesis generation for precision medicine research. The long-term vision of G-DOC Plus is to extend this translational bioinformatics platform to stay current with emerging omics technologies and analysis methods to continue supporting novel hypothesis generation, analysis and validation for integrative biomedical research. By integrating several aspects of the disease and exposing various data elements, such as outpatient lab workup, pathology, radiology, current treatments, molecular signatures and expected outcomes over a web interface, G-DOC Plus will continue to strengthen precision medicine research. G-DOC Plus is available

Norepinephrine accumulation by the rat caudal artery in the presence of hypertensive plasma

International Nuclear Information System (INIS)

Freas, W.; Thompson, D.A.; Hart, J.L.; Muldoon, S.M.

1986-01-01

We have partially isolated endogenous factors from canine plasma which inhibit 3 H-norepinephrine (NE) accumulation by the canine saphenous vein. The purpose of this study is to determine if these circulating factors may account for the observed differences in 3 H-NE uptake by hypertensive and normotensive blood vessels. Three models of hypertension were examined in this study. Blood vessels were compared from SHR and WKY rats, deoxycorticosterone acetate (DOCA) and control rats, and reduced renal mass (RRM) and control rats. There was no significant difference in 3 H-NE accumulation between blood vessels obtained from RRM and paired control rats. However, both the SHR and DOCA hypertensive caudal arteries and aorta accumulated significantly more 3 H-NE than their corresponding control tissues. There was not a significant change in 3 H-NE accumulation between hypertensive and control vena cava and mesenteric arteries. Normotensive and hypertensive plasma inhibited 3 H-NE accumulation by the rat caudal artery. However, there was not a correlation between blood pressure of plasma donor rats and accumulation of 3 H-NE. Therefore, although there are differences in 3 H-NE accumulation between hypertensive and normotensive blood vessels, plasma does not contain a factor responsible for this observed difference

75 FR 12496 - Proposed Information Collection; Comment Request; DOC National Environmental Policy Act...

Science.gov (United States)

2010-03-16

...; DOC National Environmental Policy Act Environmental Questionnaire and Checklist AGENCY: Office of the...., Washington, DC 20230 (or via the Internet at [email protected]doc.gov ). FOR FURTHER INFORMATION CONTACT: Requests for... Constitution Avenue, NW., Washington, DC 20230 (or via the Internet at [email protected]doc.gov ). SUPPLEMENTARY...

Evaluation of Dissolved Inorganic and Organic Carbon Concentrations (DIC, DOC and Their Isotopic Compositions (δ 13C-DOC, δ 13C-DIC in Water Resources of the Karde Catchment (North of Mashhad

Directory of Open Access Journals (Sweden)

Hossein Mohammadzadeh

2015-07-01

Full Text Available In this paper, the variations of dissolved inorganic and organic carbon (DIC, DOC concentrations and their isotopic compositions (δ13C- DIC, δ13C- DOC were evaluated in both surface and ground water resources in the Karde catchment area (with an area of about 547 Km2, located in the North of Mashhad. To identify the sources of the dissolved carbon (DIC and DOC, samples were collected in June 2011 from surface and ground water resources (river, dam’s lake, springs, wells, and Qanat and from depths of 1, 5, 10, 15, and 20 meters of Karde dam lakeat a point located near the dam outlet. Field parameters (T, EC, and TDS were measured during sampling. All measurements were performed in the G.G. Hatch Stable Isotope Laboratory at the University of Ottawa, Canada. The concentrations and isotopic compositions of DIC and DOC were determined using TCA and CF-IRMS instruments, respectively. Based on the results obt 1-دانشیار،مرکزتحقیقاتآبهایزیرزمینی متآب،دانشکدهعلوم،دانشگاهفردوسی مشهد،،مشهد، ایران 2- دانشجوی کارشناسی ارشدهیدروژئولوژی، مرکزتحقیقاتآبهایزیرزمینی متآب،دانشکده علوم،دانشگاهفردوسیمشهد، مشهد، ایران *نویسنده مسئول، پست الکترونیکی:mohammadzadeh@um.ac.ir           ained, the average values of DIC are 54.1 mg/l and 66.8 mg/l in the surface and ground water resources in the Karde catchment area, respectively; the average values of DOC are 2.2 mg/l and 0.45 mg/l; the average values of δ13C-DIC are -7‰ and -11 ‰; and the average values of δ13C-DOC are -31.6‰ and -29.5 ‰, respectively. In general, the concentrations of DIC, DOC, and their isotopic compositions (δ13C-DIC, δ13C-DOC are different in the various water resources (surface and ground water in the catchment and the major source of dissolved carbon in the catchment area is

Music interventions in disorders of consciousness (DOC) - a systematic review.

Science.gov (United States)

Grimm, Teresa; Kreutz, Gunter

2018-03-22

The effects of music interventions including active and receptive music therapy for people living with neurogenic disorders of consciousness (DOC) have been subject to empirical studies in the past. The aim of this systematic review was to find and analyse the current research about the effects of musical interventions on people with DOC. For this purpose, studies with music interventions and patients with DOC from the year 1900 to 2017 were searched in English, German, and French in different databases. Risk-of-bias-analyses were conducted for each study that fulfilled the inclusion criteria. Twenty-two quantitative studies (three randomised controlled trials with more than 10 participants) were found eligible for review. They include a total of 329 participants living with either coma, unresponsive wakefulness syndrome, or minimally conscious state. Music interventions were associated with favourable behavioural and physiological responses in several studies, but methodological quality and outcomes were heterogeneous. More studies with a larger number of participants are needed as well as a consensus on key characteristics of effective short-term and long-term music interventions for DOC.

Extraordinary slow degradation of dissolved organic carbon (DOC) in a cold marginal sea.

Science.gov (United States)

Kim, Tae-Hoon; Kim, Guebuem; Lee, Shin-Ah; Dittmar, Thorsten

2015-09-08

Dissolved organic carbon (DOC) is the largest organic carbon reservoir in the ocean, and the amount of carbon in this reservoir rivals that in atmospheric CO2. In general, DOC introduced into the deep ocean undergoes a significant degradation over a centennial time scale (i.e., ~50 μM to ~34 μM in the North Atlantic and Mediterranean Sea). However, we here show that high concentrations of DOC (58 ± 4 μM) are maintained almost constantly over 100 years in the entire deep East/Japan Sea (EJS). The degradation rate in this sea is estimated to be 0.04 μmol C kg(-1) yr(-1), which is 2-3 times lower than that in the North Atlantic and Mediterranean Sea. Since the source of DOC in the deep EJS is found to be of marine origin on the basis of δ(13)C-DOC signatures, this slow degradation rate seems to be due to low temperature (DOC in the world ocean is very sensitive to global warming and slowdown of global deep-water overturning.

DOC:NO3- ratios and NO3- uptake in forested headwater streams

Science.gov (United States)

Rodríguez-Cardona, Bianca; Wymore, Adam S.; McDowell, William H.

2016-01-01

The underlying mechanisms driving the coupled interactions between inorganic nitrogen uptake and dissolved organic matter are not well understood, particularly in surface waters. To determine the relationship between dissolved organic carbon (DOC) quantity and nitrate (NO3-) uptake kinetics in streams, we performed a series of NO3- Tracer Additions for Spiraling Curve Characterization experiments in four streams within the Lamprey River Watershed, New Hampshire, across a range in background DOC concentrations (1-8 mg C/L). Experiments were performed throughout the 2013 and 2014 growing seasons. Across streams and experimental dates, ambient uptake velocity (Vf) correlated positively with increasing DOC concentrations and DOC:NO3- ratios but was only weakly negatively associated with NO3- concentrations. Ambient NO3- Vf was unrelated to pH, light, temperature, dissolved oxygen, and Specific Ultraviolet Absorbance at 254 nm. Although there were general tendencies across the entire Lamprey River Watershed, individual sites behaved differently in their uptake kinetics. NO3- uptake dynamics in the Lamprey River Watershed are most strongly influenced by DOC concentrations rather than NO3- concentrations or physicochemical parameters, which have been identified as regional- to continental-scale drivers in previous research. Understanding the fundamental relationships between dissolved organic matter and inorganic nutrients will be important as global and climatic changes influence the delivery and production of DOC and NO3- in aquatic ecosystems.

Testing seasonal and long-term controls of streamwater DOC using empirical and process-based models.

Science.gov (United States)

Futter, Martyn N; de Wit, Heleen A

2008-12-15

Concentrations of dissolved organic carbon (DOC) in surface waters are increasing across Europe and parts of North America. Several mechanisms have been proposed to explain these increases including reductions in acid deposition, change in frequency of winter storms and changes in temperature and precipitation patterns. We used two modelling approaches to identify the mechanisms responsible for changing surface water DOC concentrations. Empirical regression analysis and INCA-C, a process-based model of stream-water DOC, were used to simulate long-term (1986--2003) patterns in stream water DOC concentrations in a small boreal stream. Both modelling approaches successfully simulated seasonal and inter-annual patterns in DOC concentration. In both models, seasonal patterns of DOC concentration were controlled by hydrology and inter-annual patterns were explained by climatic variation. There was a non-linear relationship between warmer summer temperatures and INCA-C predicted DOC. Only the empirical model was able to satisfactorily simulate the observed long-term increase in DOC. The observed long-term trends in DOC are likely to be driven by in-soil processes controlled by SO4(2-) and Cl(-) deposition, and to a lesser extent by temperature-controlled processes. Given the projected changes in climate and deposition, future modelling and experimental research should focus on the possible effects of soil temperature and moisture on organic carbon production, sorption and desorption rates, and chemical controls on organic matter solubility.

Sodium pump activity and calcium relaxation in vascular smooth muscle of deoxycorticosterone acetate-salt rats

International Nuclear Information System (INIS)

Soltis, E.E.; Field, F.P.

1986-01-01

The Na + -K + pump activity was determined in femoral arterial smooth muscle from deoxycorticosterone acetate (DOCA)-salt hypertensive rats using potassium relaxation and ouabain-sensitive 86 Rb uptake as indices. The membrane-stabilizing effect of calcium and its relation to Na + -K + pump activity also were examined. Femoral arteries from DOCA-salt rats exhibited a greater relaxation in response to potassium addition after contraction with norepinephrine in a low potassium (0.6 mM) Krebs solution. The concentration of potassium required to produce a 50% relaxation was significantly less in DOCA-salt rats. Ouabain-sensitive 86 Rb uptake was significantly greater at 3, 10, and 20 minutes of 86 Rb incubation in femoral arteries from DOCA-salt rats. Linear regression analysis revealed a significant correlation between the uptake of 86 Rb and time of incubation in both control and DOCA-salt rats. A significant difference in the slopes of the regression lines showed that the rate of uptake was greater in DOCA-salt rats. No difference was observed in ouabain-insensitive 86 Rb uptake. A dose-dependent relaxation in response to increasing concentrations of calcium following contraction to norepinephrine was observed in femoral arteries from control and DOCA-salt rats. The relaxation was directly dependent on the level of extracellular potassium and was blocked by ouabain. Femoral arteries from DOCA-salt rats relaxed to a significantly greater extent in response to calcium at each level of potassium when compared with controls. These results provide further evidence for an increase in Na + -K + pump activity in vascular smooth muscle from DOCA-salt hypertensive rats

Comparison of plasma input and reference tissue models for analysing [(11)C]flumazenil studies

NARCIS (Netherlands)

Klumpers, Ursula M. H.; Veltman, Dick J.; Boellaard, Ronald; Comans, Emile F.; Zuketto, Cassandra; Yaqub, Maqsood; Mourik, Jurgen E. M.; Lubberink, Mark; Hoogendijk, Witte J. G.; Lammertsma, Adriaan A.

2008-01-01

A single-tissue compartment model with plasma input is the established method for analysing [(11)C]flumazenil ([(11)C]FMZ) studies. However, arterial cannulation and measurement of metabolites are time-consuming. Therefore, a reference tissue approach is appealing, but this approach has not been

Doc2b synchronizes secretion from chromaffin cells by stimulating fast and inhibiting sustained release

DEFF Research Database (Denmark)

da Silva Pinheiro, Paulo César; de Wit, Heidi; Walter, Alexander M

2013-01-01

Synaptotagmin-1 and -7 constitute the main calcium sensors mediating SNARE-dependent exocytosis in mouse chromaffin cells, but the role of a closely related calcium-binding protein, Doc2b, remains enigmatic. We investigated its role in chromaffin cells using Doc2b knock-out mice and high temporal...... resolution measurements of exocytosis. We found that the calcium dependence of vesicle priming and release triggering remained unchanged, ruling out an obligatory role for Doc2b in those processes. However, in the absence of Doc2b, release was shifted from the readily releasable pool to the subsequent...... sustained component. Conversely, upon overexpression of Doc2b, the sustained component was largely inhibited whereas the readily releasable pool was augmented. Electron microscopy revealed an increase in the total number of vesicles upon Doc2b overexpression, ruling out vesicle depletion as the cause...

Purification and crystallization of Phd, the antitoxin of the phd/doc operon

International Nuclear Information System (INIS)

Garcia-Pino, Abel; Sterckx, Yann; Vandenbussche, Guy; Loris, Remy

2010-01-01

The antitoxin Phd from the phd/doc operon of bacteriophage P1 was crystallized in two distinct crystal forms. The antitoxin Phd from the phd/doc module of bacteriophage P1 was crystallized in two distinct crystal forms. Crystals of His-tagged Phd contain a C-terminally truncated version of the protein and diffract to 2.20 Å resolution. Crystals of untagged Phd purified from the Phd–Doc complex diffract to 2.25 Å resolution. These crystals are partially merohedrally twinned and contain the full-length version of the protein

Applicability of MIEX(®)DOC process for organics removal from NOM laden water.

Science.gov (United States)

Karpinska, Anna M; Boaventura, Rui A R; Vilar, Vítor J P; Bilyk, Andrzej; Molczan, Marek

2013-06-01

The aim of this study was to evaluate applicability of ion exchange process for organics removal from Douro River surface water at the intake of Lever water treatment plant using magnetized ion exchange resin MIEX®. Qualitative analysis of the natural organic matter present in the surface water and prediction of its amenability to removal in conventional coagulation process were assessed. Results obtained in MIEX®DOC process kinetic batch experiments allowed determination of ion exchange efficiency in dissolved organic carbon (DOC), UV absorbing organics, and true color removal. The data were compared with the efficiencies of the conventional unit processes for organics removal at Lever WTP. MIEX®DOC process revealed to be more efficient in DOC removal than conventional treatment achieving the efficiencies in the range of 61-91 %, lowering disinfection by-products formation potential of the water. DOC removal efficiency at Lever WTP depends largely on the raw water quality and ranges from 28 % for water of moderated quality to 89 % of significantly deteriorated quality. In this work, MIEX®DOC process was also used as a reference method for the determination of contribution of anionic fraction to dissolved organic matter and selectivity of the unit processes at Lever WTP for its removal.

[11C]Flumazenil metabolite measurement in plasma is not necessary for accurate brain benzodiazepine receptor quantification

International Nuclear Information System (INIS)

Sanabria-Bohorquez, S.M.; Veraart, C.; Labar, D.; Bol, A.; Volder, A.G. de; Michel, C.; Leveque, P.

2000-01-01

In this work, a mathematical correction for metabolites has been validated which estimates the relative amount of [ 11 C]flumazenil ([ 11 C]FMZ) in the total plasma curve from the tissue kinetic data without the need for direct metabolite measurement in blood plasma samples. Kinetic data were obtained using a 90-min three-injection protocol on five normal volunteers. First, the relative amount of [ 11 C]FMZ in plasma was modelled by a two-parameter exponential function. The parameters were estimated either directly by fitting this model to the blood plasma metabolite measurements, or indirectly from the simultaneous fitting of tissue time activity curves from several brain regions with a non-linear FMZ kinetic model. Second, the direct and indirect metabolite corrections were fixed and the FMZ compartmental parameters were determined on a regional basis in the brain. The validation was performed by comparing the regional values of benzodiazepine receptor density B max and equilibrium dissociation constant K d obtained with the direct metabolite correction with those values obtained with the indirect correction. For B max , the correlation coefficient r 2 was above 0.97 for all subjects and the slope values of the linear regression were within the interval [0.97, 1.2]. For K d , r 2 was above 0.96, and the slope values of the linear regression were within the interval [0.99, 1.1]. Simulation studies were performed in order to evaluate whether this metabolite correction method could be used in a clinical protocol where only a single [ 11 C]FMZ injection and a linear compartmental model are used. The resulting [ 11 C]FMZ distribution volume estimates were found to be linearly correlated with the true values, with r 2 =1.0 and a slope value of 1.1. The mathematical metabolite correction proved to be a feasible and reliable method to estimate the relative amount of [ 11 C]FMZ in plasma and the compartmental model parameters for three-injection protocols. Although

COLWRIT – Collaborative Online Writing in Google Docs

DEFF Research Database (Denmark)

Andreasen, Lars Birch; Winther, Frederikke; Hanghøj, Thorkild

2014-01-01

The poster presents preliminary hypotheses and findings of an on-going research project at Aalborg University, Denmark, which explores university students’ uses of collaborative writing tools like Google Docs when doing collaborative project work. The research project has a special focus on the v......The poster presents preliminary hypotheses and findings of an on-going research project at Aalborg University, Denmark, which explores university students’ uses of collaborative writing tools like Google Docs when doing collaborative project work. The research project has a special focus...... on the various effects on the collaboration process of students’ various usage of the commenting functions of online writing tools. The poster received the Best Poster Award at the conference....

48 CFR 1337.110-71 - Additional DOC clauses related to service contracting.

Science.gov (United States)

2010-10-01

... 48 Federal Acquisition Regulations System 5 2010-10-01 2010-10-01 false Additional DOC clauses related to service contracting. 1337.110-71 Section 1337.110-71 Federal Acquisition Regulations System....110-71 Additional DOC clauses related to service contracting. (a) Insert a clause substantially...

Modelling impacts of atmospheric deposition and temperature on long-term DOC trends

NARCIS (Netherlands)

Sawicka, Kasia; Rowe, E.C.; Evans, C.D.; Monteith, D.T.; Vanguelova, E.I.; Wade, A.J.; Clark, J.M.

2017-01-01

It is increasingly recognised that widespread and substantial increases in Dissolved organic carbon (DOC) concentrations in remote surface, and soil, waters in recent decades are linked to declining acid deposition. Effects of rising pH and declining ionic strength on DOC solubility have been

Increased interleukin-11 levels in thoracic aorta and plasma from patients with acute thoracic aortic dissection.

Science.gov (United States)

Xu, Yao; Ye, Jing; Wang, Menglong; Wang, Yuan; Ji, Qingwei; Huang, Ying; Zeng, Tao; Wang, Zhen; Ye, Di; Jiang, Huimin; Liu, Jianfang; Lin, Yingzhong; Wan, Jun

2018-06-01

Interleukin (IL) 11 is closely related to tumor and hematological system diseases. Recent studies have demonstrated that IL-11 also participates in cardiovascular diseases, including ischemia-reperfusion mediated heart injury and acute myocardial infarction. This study aimed to investigate whether IL-11 is involved in acute thoracic aortic dissection (TAD). Aortic tissue samples from normal donors and acute TAD patients were collected, and the expression of IL-11 in all aortic tissue was analyzed. In addition, blood samples from patients with chest pain were collected and divided into a non-AD (NAD) group and a TAD group according to the results of computed tomography angiography of the thoracic aorta. The plasma IL-11, IL-17 and interferon (IFN) γ in all blood samples were measured. Compared with aortic tissue of normal controls, IL-11 was significantly increased in aortic tissue of acute TAD patients, especially in the torn section. The IL-11 was derived from aorta macrophages in TAD. In addition, the plasma IL-11, IL-17 and IFN-γ were significantly higher in acute TAD patients than in NAD patients, and the correlation analysis showed that IL-11 levels were positively correlated with levels of IFN-γ, IL-17, glucose, systolic blood pressure, diastolic blood pressure, white blood cells, C-reactive proteins and D-dimers. Binary logistic regression analyses showed that elevated IL11 in patients who may have diagnostic value of TAD, but less that D-dimer. IL-11 was increased in thoracic aorta and plasma of TAD patients and may be a promising biomarker for diagnosis in patients with TAD. Copyright © 2018. Published by Elsevier B.V.

Radioimmunoassay for estimation of 11-deoxycortisol in plasma. Application for metopirone-test

International Nuclear Information System (INIS)

Hubl, W.; Buechner, M.; Haussig, K.; Rohde, W.; Stahl, F.

1978-01-01

A radioimmunoassay for the measurement of 11-deoxycortisol in plasma is described. Antiserum against 11-deoxycortisol was produced by immunizing rabbits with the 21-hemisuccinate of 11-deoxycortisol coupled to bovine serum albumin. The method does not require chromatography but instead makes use of a simple extraction procedure which, in combination with the antibody characteristics, is relatively specific for the 11-deoxycortisol determination. The smallest amount measurable is 5 pg. The intra-assay coefficient of variation was 6.3% before metopirone and 7.2% after metopirone. The inter-assay coefficient of variation was 12.5% before metopirone and 10.3% after metopirone. Pituitary-adrenal reserve was evaluted in control and hypopituitary subjects by a simple midnight metopirone test. (author)

Process Inference from High Frequency Temporal Variations in Dissolved Organic Carbon (DOC) Dynamics Across Nested Spatial Scales

Science.gov (United States)

Tunaley, C.; Tetzlaff, D.; Lessels, J. S.; Soulsby, C.

2014-12-01

In order to understand aquatic ecosystem functioning it is critical to understand the processes that control the spatial and temporal variations in DOC. DOC concentrations are highly dynamic, however, our understanding at short, high frequency timescales is still limited. Optical sensors which act as a proxy for DOC provide the opportunity to investigate near-continuous DOC variations in order to understand the hydrological and biogeochemical processes that control concentrations at short temporal scales. Here we present inferred 15 minute stream water DOC data for a 12 month period at three nested scales (1km2, 3km2 and 31km2) for the Bruntland Burn, a headwater catchment in NE Scotland. High frequency data were measured using FDOM and CDOM probes which work by measuring the fluorescent component and coloured component, respectively, of DOC when exposed to ultraviolet light. Both FDOM and CDOM were strongly correlated (r2 >0.8) with DOC allowing high frequency estimations. Results show the close coupling of DOC with discharge throughout the sampling period at all three spatial scales. However, analysis at the event scale highlights anticlockwise hysteresis relationships between DOC and discharge due to the delay in DOC being flushed from the increasingly large areas of peaty soils as saturation zones expand and increase hydrological connectivity. Lag times vary between events dependent on antecedent conditions. During a 10 year drought period in late summer 2013 it was apparent that very small changes in discharge on a 15 minute timescale result in high increases in DOC. This suggests transport limitation during this period where DOC builds up in the soil and is not flushed regularly, therefore any subsequent increase in discharge results in large DOC peaks. The high frequency sensors also reveal diurnal variability during summer months related to the photo-oxidation, evaporative and biological influences of DOC during the day. This relationship is less

Natural diet of coral-excavating sponges consists mainly of dissolved organic carbon (DOC).

Science.gov (United States)

Mueller, Benjamin; de Goeij, Jasper M; Vermeij, Mark J A; Mulders, Yannick; van der Ent, Esther; Ribes, Marta; van Duyl, Fleur C

2014-01-01

Coral-excavating sponges are the most important bioeroders on Caribbean reefs and increase in abundance throughout the region. This increase is commonly attributed to a concomitant increase in food availability due to eutrophication and pollution. We therefore investigated the uptake of organic matter by the two coral-excavating sponges Siphonodictyon sp. and Cliona delitrix and tested whether they are capable of consuming dissolved organic carbon (DOC) as part of their diet. A device for simultaneous sampling of water inhaled and exhaled by the sponges was used to directly measure the removal of DOC and bacteria in situ. During a single passage through their filtration system 14% and 13% respectively of the total organic carbon (TOC) in the inhaled water was removed by the sponges. 82% (Siphonodictyon sp.; mean ± SD; 13 ± 17 μmol L(-1)) and 76% (C. delitrix; 10 ± 12 μmol L(-1)) of the carbon removed was taken up in form of DOC, whereas the remainder was taken up in the form of particulate organic carbon (POC; bacteria and phytoplankton) despite high bacteria retention efficiency (72 ± 15% and 87 ± 10%). Siphonodictyon sp. and C. delitrix removed DOC at a rate of 461 ± 773 and 354 ± 562 μmol C h(-1) respectively. Bacteria removal was 1.8 ± 0.9 × 10(10) and 1.7 ± 0.6 × 10(10) cells h(-1), which equals a carbon uptake of 46.0 ± 21.2 and 42.5 ± 14.0 μmol C h(-1) respectively. Therefore, DOC represents 83 and 81% of the TOC taken up by Siphonodictyon sp. and C. delitrix per hour. These findings suggest that similar to various reef sponges coral-excavating sponges also mainly rely on DOC to meet their carbon demand. We hypothesize that excavating sponges may also benefit from an increasing production of more labile algal-derived DOC (as compared to coral-derived DOC) on reefs as a result of the ongoing coral-algal phase shift.

Natural diet of coral-excavating sponges consists mainly of dissolved organic carbon (DOC.

Directory of Open Access Journals (Sweden)

Benjamin Mueller

Full Text Available Coral-excavating sponges are the most important bioeroders on Caribbean reefs and increase in abundance throughout the region. This increase is commonly attributed to a concomitant increase in food availability due to eutrophication and pollution. We therefore investigated the uptake of organic matter by the two coral-excavating sponges Siphonodictyon sp. and Cliona delitrix and tested whether they are capable of consuming dissolved organic carbon (DOC as part of their diet. A device for simultaneous sampling of water inhaled and exhaled by the sponges was used to directly measure the removal of DOC and bacteria in situ. During a single passage through their filtration system 14% and 13% respectively of the total organic carbon (TOC in the inhaled water was removed by the sponges. 82% (Siphonodictyon sp.; mean ± SD; 13 ± 17 μmol L(-1 and 76% (C. delitrix; 10 ± 12 μmol L(-1 of the carbon removed was taken up in form of DOC, whereas the remainder was taken up in the form of particulate organic carbon (POC; bacteria and phytoplankton despite high bacteria retention efficiency (72 ± 15% and 87 ± 10%. Siphonodictyon sp. and C. delitrix removed DOC at a rate of 461 ± 773 and 354 ± 562 μmol C h(-1 respectively. Bacteria removal was 1.8 ± 0.9 × 10(10 and 1.7 ± 0.6 × 10(10 cells h(-1, which equals a carbon uptake of 46.0 ± 21.2 and 42.5 ± 14.0 μmol C h(-1 respectively. Therefore, DOC represents 83 and 81% of the TOC taken up by Siphonodictyon sp. and C. delitrix per hour. These findings suggest that similar to various reef sponges coral-excavating sponges also mainly rely on DOC to meet their carbon demand. We hypothesize that excavating sponges may also benefit from an increasing production of more labile algal-derived DOC (as compared to coral-derived DOC on reefs as a result of the ongoing coral-algal phase shift.

Effects of Lactobacillus plantarum TWK10-Fermented Soymilk on Deoxycorticosterone Acetate-Salt-Induced Hypertension and Associated Dementia in Rats

Directory of Open Access Journals (Sweden)

Te-Hua Liu

2016-05-01

Full Text Available Oxidative stress resulting from excessive production of reactive oxygen species is the major mediator of neuronal cell degeneration observed in neurodegenerative diseases, such as Alzheimer’s disease (AD and vascular dementia (VaD. Additionally, hypertension has been shown to be a positive risk factor for VaD. Therefore, the objective of this study was to investigate the effects of Lactobacillus plantarum strain TWK10 (TWK10-fermented soymilk on the protection of PC-12 cells in H2O2-, oxygen-glucose deprivation (OGD- and deoxycorticosterone acetate (DOCA-salt-induced rat models of VaD. Notably, the viabilities of H2O2-treated PC-12 cells and OGD model were significantly increased by treatment with TWK10-fermented soymilk ethanol extract (p < 0.05. In addition, oral administration of TWK10-fermented soymilk extract in DOCA-salt hypertension-induced VaD rats resulted in a significant decrease in blood pressure (p < 0.05, which was regulated by inhibiting ACE activity and promoting NO production, in addition to decreased escape latency and increased target crossing (p < 0.05. In conclusion, these results demonstrated that TWK10-fermented soymilk extract could improve learning and memory in DOCA-salt hypertension-induced VaD rats by acting as a blood pressure-lowering and neuroprotective agent.

The Intrinsically Disordered Domain of the Antitoxin Phd Chaperones the Toxin Doc against Irreversible Inactivation and Misfolding*

Science.gov (United States)

De Gieter, Steven; Konijnenberg, Albert; Talavera, Ariel; Butterer, Annika; Haesaerts, Sarah; De Greve, Henri; Sobott, Frank; Loris, Remy; Garcia-Pino, Abel

2014-01-01

The toxin Doc from the phd/doc toxin-antitoxin module targets the cellular translation machinery and is inhibited by its antitoxin partner Phd. Here we show that Phd also functions as a chaperone, keeping Doc in an active, correctly folded conformation. In the absence of Phd, Doc exists in a relatively expanded state that is prone to dimerization through domain swapping with its active site loop acting as hinge region. The domain-swapped dimer is not capable of arresting protein synthesis in vitro, whereas the Doc monomer is. Upon binding to Phd, Doc becomes more compact and is secured in its monomeric state with a neutralized active site. PMID:25326388

ToxicDocs (www.ToxicDocs.org): from history buried in stacks of paper to open, searchable archives online.

Science.gov (United States)

Rosner, David; Markowitz, Gerald; Chowkwanyun, Merlin

2018-02-01

As a result of a legal mechanism called discovery, the authors accumulated millions of internal corporate and trade association documents related to the introduction of new products and chemicals into workplaces and commerce. What did these private entities discuss among themselves and with their experts? The plethora of documents, both a blessing and a curse, opened new sources and interesting questions about corporate and regulatory histories. But they also posed an almost insurmountable challenge to historians. Thus emerged ToxicDocs, possible only with a technological innovation known as "Big Data." That refers to the sheer volume of new digital data and to the computational power to analyze them. Users will be able to identify what firms knew (or did not know) about the dangers of toxic substances in their products-and when. The database opens many areas to inquiry including environmental studies, business history, government regulation, and public policy. ToxicDocs will remain a resource free and open to all, anywhere in the world.

[Estimation of DOC concentrations using CDOM absorption coefficients: a case study in Taihu Lake].

Science.gov (United States)

Jiang, Guang-Jia; Ma, Rong-Hua; Duan, Hong-Tao

2012-07-01

Dissolved organic carbon (DOC) is the largest organic carbon stock in water ecosystems, which plays an important role in the carbon cycle in water. Chromophoric dissolved organic matter (CDOM), an important water color variation, is the colored fraction of DOC and its absorption controls the instruction of light under water. The available linkage between DOC concentration and CDOM absorptions enables the determination of DOC accumulations using remote sensing reflectance or radiance in lake waters. The present study explored the multi-liner relationship between CDOM absorptions [a(g) (250) and a(g) (365)] and DOC concentrations in Taihu Lake, based on the available data in 4 cruises (201005, 201101, 201103, 201105) (totally 183 sampling sites). Meanwhile, the results were validated with the data of the experiment carried out from August 29 to September 2, 2011 in Taihu Lake (n = 27). Furthermore, a universal pattern of modeling from remote sensing was built for lake waters. The results demonstrated that this method provided more satisfying estimation of DOC concentrations in Taihu Lake. Except the data obtained in January 2011, the fitted results of which were not conductive to the winter dataset (201101) in Taihu Lake, due to the diverse sources and sinks of DOC and CDOM, the multi-liner relationship was robust for the data collected in the other three cruises (R2 = 0.64, RMSE = 14.31%, n = 164), which was validated using the 201108 sampling dataset (R2 = 0.67, RMSE = 10.58%, n = 27). In addition, the form of the statistic model is universal, to some extent, for other water areas, however, there is difference in the modeling coefficients. Further research should be focused on the parameterization using local data from different lakes, which provides effective methodology for the estimation of DOC concentrations in lakes and other water regions.

Implementing Gmail Docs and Blogs for Enhancing Motivation towards Writing in English

Science.gov (United States)

Gomez Zapata, Julian Esteban

2010-01-01

This action research paper dealt with how to increase motivation towards writing in English through blogs and Gmail docs in a private school in Medellín, Colombia. It was necessary to explore the concepts of "social interaction," "motivation" and "reasons for writing" to understand how blogs and Gmail docs favored…

System requirements and design description for the document basis database interface (DocBasis)

International Nuclear Information System (INIS)

Lehman, W.J.

1997-01-01

This document describes system requirements and the design description for the Document Basis Database Interface (DocBasis). The DocBasis application is used to manage procedures used within the tank farms. The application maintains information in a small database to track the document basis for a procedure, as well as the current version/modification level and the basis for the procedure. The basis for each procedure is substantiated by Administrative, Technical, Procedural, and Regulatory requirements. The DocBasis user interface was developed by Science Applications International Corporation (SAIC)

Radiocarbon in marine dissolved organic carbon (DOC)

NARCIS (Netherlands)

Clercq, M. le; Plicht, J. van der; Meijer, H.A.J.; Baar, H.J.W. de

Dissolved Organic Carbon (DOC) plays an important role in the ecology and carbon cycle in the ocean. Analytical problems with concentration and isotope ratio measurements have hindered its study. We have constructed a new analytical method based on supercritical oxidation for the determination of

A Novel Source of DOC and DON to Watershed Soils

Science.gov (United States)

Aitkenhead-Peterson, J. A.

2017-12-01

A source of dissolved organic carbon (DOC) and nitrogen (DON) to soils and groundwater is that emanating from decomposing mammals. Although there is an increase in human donor facilities (body farms) in the USA and in mass mortality events (MME) worldwide, this injection of DOC and DON into watershed soils has received little attention. Studies at two human donor facilities in Texas, USA have revealed that the purge fluid associated with decomposition is extremely high in DOC and DON and migrates down the soil profile. Two studies were carried out 1) The southeast Texas Applied Forensic Science (STAFS) facility on an Alfisol with a saturated hydraulic conductivity of 331 mm hr-1 and 83% sand and 2) the Forensic Anthropology Research Facility (FARF) on Mollisols with a saturated hydraulic conductivity of 3.6-9.7 mm hr-1 and 28-33% sand. The numbers of days since donors were laid in the environment ranged from 219-680 d at STAFS and 306-960 d at FACTS. Purge can occur between 5 and 30 d dependent on the time of year the body is placed and the resultant phenomenon is termed cadaver decomposition island (CDI). Soil cores were taken at 5 cm increments to a depth of 30 cm in the sandy soil and 15 cm in the clayey/rocky soil. In the sandy soils, DOC concentrations were significantly higher in all the CDI soils when compared to control soils at depths of 15, 20, 25 and 30 cm and ranged from 121.7 µg g-1 (30 cm) to 167.6 µg g-1 (15 cm) in control soils and 461.9 µg g-1 (30 cm) to 660.4 µg g-1 (15 cm) in CDI soils, representing a three- to four-fold increase in DOC relative to control soils. DON in all CDI soils was not significantly higher than control soils until 30 cm depth and ranged from 9.9-32.3 µg g-1 in CDI soils and 121.7 µg g-1 in control soil, representing a two- to seven-fold increase in DON relative to control soils. DOC concentrations in control soils at the FARF site at 15 cm ranged 215-365 µg g-1 while in the CDI soils DOC was higher (range: 270

Investigations of freezing and cold storage for the analysis of peatland dissolved organic carbon (DOC) and absorbance properties.

Science.gov (United States)

Peacock, Mike; Freeman, Chris; Gauci, Vincent; Lebron, Inma; Evans, Chris D

2015-07-01

Although measured rates of biological degradation of DOC are typically low under dark conditions, it is assumed that water samples must be analysed soon after collection to provide an accurate measure of DOC concentration and UV-visible absorbance. To examine the impact of storage on DOC quality and quantity, we took water samples from an ombrotrophic peatland, and stored them in the dark at 4 °C for 138-1082 days. A median of 29% of DOC was lost during storage, but losses of absorbance at 254 nm were less. DOC loss followed a first-order exponential decay function, and was dependent on storage time. DOC half-life was calculated as 1253 days. Specific absorbance at 254 nm suggested that samples containing more aromatic DOC were more resistant to degradation, although time functioned as the primary control. Samples from two fens showed that loss of absorbance was greater at 400 nm rather than 254 nm, after 192 days storage, suggesting that non-aromatic DOC is preferentially degraded. These results suggest that samples can be stored for several months before losses of DOC become detectable, and that it is possible to back-calculate initial DOC concentrations in long-term stored samples based on known decay rates. Freeze/thaw experiments using samples from a range of peatlands suggested that DOC concentration was mostly unaffected by the process, but DOC increased 37% in one sample. Freezing had unpredictable and sometimes strong effects on absorbance, SUVA and E ratios, therefore freezing is not recommended as a method of preservation for these analyses.

Absorption and distribution of deuterium-labeled trans- and cis-11-octadecenoic acid in human plasma and lipoprotein lipids

International Nuclear Information System (INIS)

Emken, E.A.; Rohwedder, W.K.; Adlof, R.O.; DeJarlais, W.J.; Gulley, R.M.

1986-01-01

Triglycerides of deuterium-labeled trans-11-, trans-11-cis-11- and cis-9-octadecenoic acid (11t-18:1-2H, 11c-18:1-2H) were simultaneously fed to two young adult male subjects. Plasma lipids from blood samples collected periodically for 48 hr were analyzed by gas chromatography-mass spectroscopy. The results indicate the delta 11-18:1-2H acids and 9c-18:1-2H were equally well absorbed; relative turnover rates were higher for the delta 11-18-1-2H acids in plasma triglycerides; incorporation of the delta 11-18:1-2H acids into plasma phosphatidylcholine was similar to 9c-18:1-2H, but distribution at the 1- and 2-acyl positions was substantially different; esterification of cholesterol with 11t-18:1 was extremely low; chain shortening of the delta 11-18:1-2H acids was 2-3 times greater than for 9c-18:1-2H; no evidence for desaturation or elongation of the 18:1-2H acids was detected; and a 40% isotopic dilution of the 18:1-2H acids in the chylomicron triglyceride fraction indicated the presence of a substantial intestinal triglyceride pool. Based on our present knowledge, these metabolic results for delta 11-18:1 acids present in hydrogenated oils and animal fats indicate that the delta 11 isomers are no more likely than 9c-18:1 to contribute to dietary fat-related health problems

G-DOC: A Systems Medicine Platform for Personalized Oncology

Directory of Open Access Journals (Sweden)

Subha Madhavan

2011-09-01

Full Text Available Currently, cancer therapy remains limited by a “one-size-fits-all” approach, whereby treatment decisions are based mainly on the clinical stage of disease, yet fail to reference the individual's underlying biology and its role driving malignancy. Identifying better personalized therapies for cancer treatment is hindered by the lack of high-quality “omics” data of sufficient size to produce meaningful results and the ability to integrate biomedical data from disparate technologies. Resolving these issues will help translation of therapies from research to clinic by helping clinicians develop patient-specific treatments based on the unique signatures of patient's tumor. Here we describe the Georgetown Database of Cancer (G-DOC, a Web platform that enables basic and clinical research by integrating patient characteristics and clinical outcome data with a variety of high-throughput research data in a unified environment. While several rich data repositories for high-dimensional research data exist in the public domain, most focus on a single-data type and do not support integration across multiple technologies. Currently, G-DOC contains data from more than 2500 breast cancer patients and 800 gastrointestinal cancer patients, G-DOC includes a broad collection of bioinformatics and systems biology tools for analysis and visualization of four major “omics” types: DNA, mRNA, microRNA, and metabolites. We believe that G-DOC will help facilitate systems medicine by providing identification of trends and patterns in integrated data sets and hence facilitate the use of better targeted therapies for cancer. A set of representative usage scenarios is provided to highlight the technical capabilities of this resource.

The intrinsically disordered domain of the antitoxin Phd chaperones the toxin Doc against irreversible inactivation and misfolding.

Science.gov (United States)

De Gieter, Steven; Konijnenberg, Albert; Talavera, Ariel; Butterer, Annika; Haesaerts, Sarah; De Greve, Henri; Sobott, Frank; Loris, Remy; Garcia-Pino, Abel

2014-12-05

The toxin Doc from the phd/doc toxin-antitoxin module targets the cellular translation machinery and is inhibited by its antitoxin partner Phd. Here we show that Phd also functions as a chaperone, keeping Doc in an active, correctly folded conformation. In the absence of Phd, Doc exists in a relatively expanded state that is prone to dimerization through domain swapping with its active site loop acting as hinge region. The domain-swapped dimer is not capable of arresting protein synthesis in vitro, whereas the Doc monomer is. Upon binding to Phd, Doc becomes more compact and is secured in its monomeric state with a neutralized active site. © 2014 by The American Society for Biochemistry and Molecular Biology, Inc.

75 FR 16748 - Final Voluntary Product Standard; DOC PS 20-10 “American Softwood Lumber Standard”

Science.gov (United States)

2010-04-02

...-0146-02] Final Voluntary Product Standard; DOC PS 20-10 ``American Softwood Lumber Standard'' AGENCY... of Standards and Technology (NIST) announces voluntary product standard DOC PS 20-10 ``American Softwood Lumber Standard'' which will supersede DOC PS 20-05. The Standard establishes standard sizes and...

DOC concentrations across a depth-dependent light gradient on a Caribbean coral reef

NARCIS (Netherlands)

Mueller, Benjamin; Meesters, Erik H.; Duyl, Van Fleur C.

2017-01-01

Photosynthates released by benthic primary producers (BPP), such as reef algae and scleractinian corals, fuel the dissolved organic carbon (DOC) production on tropical coral reefs. DOC concentrations near BPP have repeatedly been observed to be elevated compared to those in the surrounding water

Sources for increased DOC-concentrations in the groundwater downstream of the landfill Hohne (DEA)

International Nuclear Information System (INIS)

Bahlmann, E.; Seifert, R.; Eschenbach, A.; Kleinschmidt, V.

2017-08-01

Construction waste together with drilling mud and oil-contaminated soil had been deposited in the landfill Hohne from 1971. Four groundwater monitoring sites had been installed: one monitoring site upstream and three sites downstream of the landfill in three different directions. Downstream of the landfill increased concentrations of chloride, sulphate, sodium and DOC (dissolved organic carbon) had been measured over a period of years. Particularly the source of the DOC has remained unclear. Assumptions were (i) leaking of contaminants from the landfill and degradation under the landfill by microbes or plants or (ii) leaching of DOC from the soil under the landfill caused by a change in the redox potential. The determination of the DOC source was the major subject of this study.

Function analysis of 5'-UTR of the cellulosomal xyl-doc cluster in Clostridium papyrosolvens.

Science.gov (United States)

Zou, Xia; Ren, Zhenxing; Wang, Na; Cheng, Yin; Jiang, Yuanyuan; Wang, Yan; Xu, Chenggang

2018-01-01

Anaerobic, mesophilic, and cellulolytic Clostridium papyrosolvens produces an efficient cellulolytic extracellular complex named cellulosome that hydrolyzes plant cell wall polysaccharides into simple sugars. Its genome harbors two long cellulosomal clusters: cip - cel operon encoding major cellulosome components (including scaffolding) and xyl - doc gene cluster encoding hemicellulases. Compared with works on cip - cel operon, there are much fewer studies on xyl - doc mainly due to its rare location in cellulolytic clostridia. Sequence analysis of xyl - doc revealed that it harbors a 5' untranslated region (5'-UTR) which potentially plays a role in the regulation of downstream gene expression. Here, we analyzed the function of 5'-UTR of xyl - doc cluster in C. papyrosolvens in vivo via transformation technology developed in this study. In this study, we firstly developed an electrotransformation method for C. papyrosolvens DSM 2782 before the analysis of 5'-UTR of xyl - doc cluster. In the optimized condition, a field with an intensity of 7.5-9.0 kV/cm was applied to a cuvette (0.2 cm gap) containing a mixture of plasmid and late cell suspended in exponential phase to form a 5 ms pulse in a sucrose-containing buffer. Afterwards, the putative promoter and the 5'-UTR of xyl - doc cluster were determined by sequence alignment. It is indicated that xyl - doc possesses a long conservative 5'-UTR with a complex secondary structure encompassing at least two perfect stem-loops which are potential candidates for controlling the transcriptional termination. In the last step, we employed an oxygen-independent flavin-based fluorescent protein (FbFP) as a quantitative reporter to analyze promoter activity and 5'-UTR function in vivo. It revealed that 5'-UTR significantly blocked transcription of downstream genes, but corn stover can relieve its suppression. In the present study, our results demonstrated that 5'-UTR of the cellulosomal xyl - doc cluster blocks the

A systematic examination of the relationship between CDOM and DOC for various inland waters across China

OpenAIRE

Song, Kaishan; Zhao, Ying; Wen, Zhidan; Ma, Jianhang; Shao, Tiantian; Fang, Chong; Shang, Yingxin

2016-01-01

Chromophoric dissolved organic matter (CDOM) plays a vital role in aquatic ecosystems. Strong relationship has been proven between CDOM and dissolved organic carbon (DOC), which set the basis for remote estimation of DOC with remote sensing data. An algorithm has been developed to retrieve DOC via CDOM absorption at 275 and 295 nm with coastal waters. However, the relationship between DOC and aCDOM(275) and aCDOM(295) for different types of inland waters are still not clear. Further, i...

Effect of light and nutrient availability on the release of dissolved organic carbon (DOC) by Caribbean turf algae.

Science.gov (United States)

Mueller, Benjamin; den Haan, Joost; Visser, Petra M; Vermeij, Mark J A; van Duyl, Fleur C

2016-03-22

Turf algae increasingly dominate benthic communities on coral reefs. Given their abundance and high dissolved organic carbon (DOC) release rates, turf algae are considered important contributors to the DOC pool on modern reefs. The release of photosynthetically fixed carbon as DOC generally, but not always, increases with increased light availability. Nutrient availability was proposed as an additional factor to explain these conflicting observations. To address this proposed but untested hypothesis, we documented the interactive contributions of light and nutrient availability on the release of DOC by turf algae. DOC release rates and oxygen production were quantified in incubation experiments at two light levels (full and reduced light) and two nutrient treatments (natural seawater and enriched seawater). In natural seawater, DOC release at full light was four times higher than at reduced light. When nutrients were added, DOC release rates at both light levels were similar to the natural seawater treatment at full light. Our results therefore show that low light in combination with low nutrient availability reduces the release of DOC by turf algae and that light and nutrient availability interactively determine DOC release rates by this important component of Caribbean reef communities.

78 FR 35093 - Requested Administrative Waiver of the Coastwise Trade Laws: Vessel EYE DOC; Invitation for...

Science.gov (United States)

2013-06-11

... Administrative Waiver of the Coastwise Trade Laws: Vessel EYE DOC; Invitation for Public Comments AGENCY... DOC is: INTENDED COMMERCIAL USE OF VESSEL: ``Charter fishing on Lake Erie'' GEOGRAPHIC REGION: ``Ohio..., Maritime Administration. [FR Doc. 2013-13836 Filed 6-10-13; 8:45 am] BILLING CODE 4910-81-P ...

Plant diversity induces a shift of DOC concentration over time - results from long term and large scale experiment

Science.gov (United States)

Lange, Markus; Gleixner, Gerd

2016-04-01

Plant diversity has been demonstrated as a crucial factor for soil organic carbon (SOC) storage. The horizontal SOC formation in turn is strongly impacted by the relative small but consistent flow of dissolved organic carbon (DOC) in soils. In this process, pore water leaches plant material and already stored SOC while simultaneously these leachates are transported downwards. However, there is a big uncertainty about the drivers of DOC flux; in particular about the importance of biological processes. We investigated the impact of plant diversity and other biotic drivers on DOC concentrations and total DOC fluxes (concentration × sampled water amount). In addition, we considered abiotic factors such as weather and soil conditions to assess the relative importance of biotic and abiotic drivers and how their importance changes over time. We used a comprehensive data set, gathered in the frame of the long-term biodiversity experiment "The Jena Experiment". Permanent monitoring started directly after establishment of the field site in 2002 and is still running. This enabled us to trace the impact of plant communities with their increasing establishment over the time on DOC concentration. We found the amount of sampled pore water best explained by rainfall, while it was not related to plant associated variables. Directly after establishing the experimental site, DOC concentrations were highest and then decreasing with time. In the first period of the experiment plant diversity had no or even a slightly negative impact on DOC concentrations. The direction of the plant diversity effect on DOC concentrations changed over time; namely in later phases we observed highest DOC concentrations on plots with high plant diversity. Moreover, DOC concentrations were negatively affected by increased amounts of sampled pore water indicating a dilution effect. Even though this impact was highly significant; its effect size was even less pronounced at later time points. In summary

The effect of drought on dissolved organic carbon (DOC) release from peatland soil and vegetation sources

Science.gov (United States)

Ritson, Jonathan P.; Brazier, Richard E.; Graham, Nigel J. D.; Freeman, Chris; Templeton, Michael R.; Clark, Joanna M.

2017-06-01

Drought conditions are expected to increase in frequency and severity as the climate changes, representing a threat to carbon sequestered in peat soils. Downstream water treatment works are also at risk of regulatory compliance failures and higher treatment costs due to the increase in riverine dissolved organic carbon (DOC) often observed after droughts. More frequent droughts may also shift dominant vegetation in peatlands from Sphagnum moss to more drought-tolerant species. This paper examines the impact of drought on the production and treatability of DOC from four vegetation litters (Calluna vulgaris, Juncus effusus, Molinia caerulea and Sphagnum spp.) and a peat soil. We found that mild droughts caused a 39.6 % increase in DOC production from peat and that peat DOC that had been exposed to oxygen was harder to remove by conventional water treatment processes (coagulation/flocculation). Drought had no effect on the amount of DOC production from vegetation litters; however large variation was observed between typical peatland species (Sphagnum and Calluna) and drought-tolerant grassland species (Juncus and Molinia), with the latter producing more DOC per unit weight. This would therefore suggest the increase in riverine DOC often observed post-drought is due entirely to soil microbial processes and DOC solubility rather than litter layer effects. Long-term shifts in species diversity may, therefore, be the most important impact of drought on litter layer DOC flux, whereas pulses related to drought may be observed in peat soils and are likely to become more common in the future. These results provide evidence in support of catchment management which increases the resilience of peat soils to drought, such as ditch blocking to raise water tables.

Variable flushing mechanisms and landscape structure control stream DOC export during snowmelt in a set of nested catchments

Science.gov (United States)

Vincent J. Pacific; Kelsey G. Jencso; Brian L. McGlynn

2010-01-01

Stream DOC dynamics during snowmelt have been the focus of much research, and numerous DOC mobilization and delivery mechanisms from riparian and upland areas have been proposed. However, landscape structure controls on DOC export from riparian and upland landscape elements remains poorly understood. We investigated stream and groundwater DOC dynamics across three...

Algorithm Development and Validation for Satellite-Derived Distributions of DOC and CDOM in the US Middle Atlantic Bight

Science.gov (United States)

Mannino, Antonio; Russ, Mary E.; Hooker, Stanford B.

2007-01-01

In coastal ocean waters, distributions of dissolved organic carbon (DOC) and chromophoric dissolved organic matter (CDOM) vary seasonally and interannually due to multiple source inputs and removal processes. We conducted several oceanographic cruises within the continental margin of the U.S. Middle Atlantic Bight (MAB) to collect field measurements in order to develop algorithms to retrieve CDOM and DOC from NASA's MODIS-Aqua and SeaWiFS satellite sensors. In order to develop empirical algorithms for CDOM and DOC, we correlated the CDOM absorption coefficient (a(sub cdom)) with in situ radiometry (remote sensing reflectance, Rrs, band ratios) and then correlated DOC to Rrs band ratios through the CDOM to DOC relationships. Our validation analyses demonstrate successful retrieval of DOC and CDOM from coastal ocean waters using the MODIS-Aqua and SeaWiFS satellite sensors with mean absolute percent differences from field measurements of cdom)(355)1,6 % for a(sub cdom)(443), and 12% for the CDOM spectral slope. To our knowledge, the algorithms presented here represent the first validated algorithms for satellite retrieval of a(sub cdom) DOC, and CDOM spectral slope in the coastal ocean. The satellite-derived DOC and a(sub cdom) products demonstrate the seasonal net ecosystem production of DOC and photooxidation of CDOM from spring to fall. With accurate satellite retrievals of CDOM and DOC, we will be able to apply satellite observations to investigate interannual and decadal-scale variability in surface CDOM and DOC within continental margins and monitor impacts of climate change and anthropogenic activities on coastal ecosystems.

supp11a.doc

Indian Academy of Sciences (India)

aDepartment of Chemical Engineering, Sunchon National University, 315 Maegok Dong, Suncheon 540-742, Chonnam, South Korea. bMaterials Chemistry Division, School of Advanced Sciences, VIT University, Vellore 632014, Tamilnadu, India. E-mail: ismoon@sunchon.ac.kr. Figure S1. FT-IR spectrum of compound 1.

Decreased DOC concentrations in soil water in forested areas in southern Sweden during 1987-2008.

Science.gov (United States)

Löfgren, Stefan; Zetterberg, Therese

2011-04-15

During the last two decades, there is a common trend of increasing concentrations of dissolved organic carbon (DOC) in streams and lakes in Europe, Canada and the US. Different processes have been proposed to explain this trend and recently a unifying hypothesis was presented, concluding that declining sulphur deposition and recovery from acidification, is the single most important factor for the long-term DOC concentration trends in surface waters. If this recovery hypothesis is correct, the soil water DOC concentrations should increase as well. However, long-term soil water data from Sweden and Norway indicate that there are either decreasing or indifferent DOC concentrations, while positive DOC trends have been found in the Czech Republic. Based on the soil water data from two Swedish integrated monitoring sites and geochemical modelling, it has been shown that depending on changes in pH, ionic strength and soil Al pools, the DOC solubility might be positive, negative or indifferent. In this study, we test the acidification recovery hypothesis on long-term soil water data (25 and 50cm soil depth) from 68 forest covered sites in southern Sweden, showing clear signs of recovery from acidification. The main aim was to identify potential drivers for the DOC solubility in soil solution by comparing trends in DOC concentrations with observed changes in pH, ionic strength and concentrations of Al(n+). As in earlier Swedish and Norwegian studies, the DOC concentrations in soil water decreased or showed no trend. The generally small increases in pH (median <0.3 pH units) during the investigation period seem to be counterbalanced by the reduced ionic strength and diminished Al concentrations, increasing the organic matter coagulation. Hence, opposite to the conclusion for surface waters, the solubility of organic matter seems to decrease in uphill soils, as a result of the acidification recovery. Copyright © 2011 Elsevier B.V. All rights reserved.

Dissolved organic carbon (DOC) concentrations in UK soils and the influence of soil, vegetation type and seasonality.

Science.gov (United States)

van den Berg, Leon J L; Shotbolt, Laura; Ashmore, Mike R

2012-06-15

Given the lack of studies which measured dissolved organic carbon (DOC) over long periods, especially in non-forest habitat, the aim of this study was to expand the existing datasets with data of mainly non-forest sites that were representative of the major soil and habitat types in the UK. A further aim was to predict DOC concentrations from a number of biotic and abiotic explanatory variables such as rainfall, temperature, vegetation type and soil type in a multivariate way. Pore water was sampled using Rhizon or Prenart samplers at two to three week intervals for 1 year. DOC, pH, organic carbon, carbon/nitrogen (C:N) ratios of soils and slope were measured and data on vegetation, soil type, temperature and precipitation were obtained. The majority of the variation in DOC concentrations between the UK sites could be explained by simple empirical models that included annual precipitation, and soil C:N ratio with precipitation being negatively related to DOC concentrations and C:N ratio being positively related to DOC concentrations. Our study adds significantly to the data reporting DOC concentrations in soils, especially in grasslands, heathlands and moorlands. Broad climatic and site factors have been identified as key factors influencing DOC concentrations. Copyright © 2012 Elsevier B.V. All rights reserved.

A restricted access material for rapid analysis of [11C]-labeled radiopharmaceuticals and their metabolites in plasma

International Nuclear Information System (INIS)

Gillings, Nic

2009-01-01

Introduction: Analysis of the radioactive components in plasma taken during positron emission tomography (PET) measurements is often vital for the correct quantification of the PET data. The described high-performance liquid chromatography (HPLC) method has been developed to provide a fast, sensitive and robust method for the measurement of plasma samples from PET studies using [ 11 C]-labeled radiopharmaceuticals. Methods: Unadulterated plasma samples were analyzed directly, following a simple filtration, by the use of a small extraction column, containing a restricted access material, combined with a monolithic analysis column in a column-switching HPLC system. Results: Up to 4 ml of plasma was analyzed by this method within 4.5-7 min in a fully automated process. Because of the rapid analysis, a large number of samples could be analyzed during a 90-min PET scan. The extraction column could be used for analysis of up to 500 ml of plasma before replacement was required. Conclusions: The described method is fast and robust and the large sample volumes allow for accurate determination of the radioactive components in plasma even at 90 min after injection of a [ 11 C]-labeled radiopharmaceutical.

Allopurinol does not decrease blood pressure or prevent the development of hypertension in the deoxycorticosterone acetate-salt rat model.

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Szasz, Theodora; Linder, A Elizabeth; Davis, Robert P; Burnett, Robert; Fink, Gregory D; Watts, Stephanie W

2010-12-01

Reactive oxygen species play an important role in the pathogenesis of hypertension, disease in which reactive oxygen species levels and markers of oxidative stress are increased. Xanthine oxidase (XO) is a reactive oxygen species-producing enzyme the activity of which may increase during hypertension. Studies on XO inhibition effects on blood pressure have yielded controversial results. We hypothesized that XO inhibition would decrease blood pressure or attenuate the development of deoxycorticosterone acetate (DOCA)-salt hypertension. We administered the XO inhibitor, allopurinol (50 mg/kg per day, orally) or its vehicle to rats during the established or development stages of DOCA-salt hypertension. We validated XO inhibition by high-performance liquid chromatography measurements of XO metabolites in urine, serum, and tissues demonstrating a decrease in products, increase in substrates, and detection of the active metabolite of allopurinol, oxypurinol. We monitored blood pressure continuously through radiotelemetry and performed gross evaluations of target organs of hypertension. Allopurinol treatment did not impact the course of DOCA-salt hypertension regardless of the timing of administration. Aside from a significant decrease in pulse pressure in allopurinol-treated rats, no positive differences were observed between the allopurinol and the vehicle-treated rats. We conclude that XO does not play an important role in the development or maintenance of hypertension in the rat DOCA-salt hypertension model.

Leaching of DOC, DN, and inorganic constituents from scrap tires.

Science.gov (United States)

Selbes, Meric; Yilmaz, Ozge; Khan, Abdul A; Karanfil, Tanju

2015-11-01

One concern for recycle and reuse of scrap tires is the leaching of tire constituents (organic and inorganic) with time, and their subsequent potential harmful impacts in environment. The main objective of this study was to examine the leaching of dissolved organic carbon (DOC), dissolved nitrogen (DN), and selected inorganic constituents from scrap tires. Different sizes of tire chips and crumb rubber were exposed to leaching solutions with pH's ranging from 3.0 to 10.0 for 28days. The leaching of DOC and DN were found to be higher for smaller size tire chips; however, the leaching of inorganic constituents was independent of the size. In general, basic pH conditions increased the leaching of DOC and DN, whereas acidic pH conditions led to elevated concentrations of metals. Leaching was minimal around the neutral pH values for all the monitored parameters. Analysis of the leaching rates showed that components associated with the rubbery portion of the tires (DOC, DN, zinc, calcium, magnesium, etc.) exhibited an initial rapid followed by a slow release. On the other hand, a constant rate of leaching was observed for iron and manganese, which are attributed to the metal wires present inside the tires. Although the total amounts that leached varied, the observed leaching rates were similar for all tire chip sizes and leaching solutions. Operation under neutral pH conditions, use of larger size tire chips, prewashing of tires, and removal of metal wires prior to application will reduce the impact of tire recycle and reuse. Copyright © 2015 Elsevier Ltd. All rights reserved.

Physalis minima Leaves Extract Induces Re-Endothelialization in Deoxycorticosterone Acetate-Salt-Induced Endothelial Dysfunction in Rats

Directory of Open Access Journals (Sweden)

Dian Nugrahenny

2018-02-01

Full Text Available The administration of deoxy-corticosterone acetate (DOCA-salt can induce oxidative stress leading to decrease the bioavailability of nitric oxide (NO, increase senescence of circulating endothelial progenitor cells (EPCs, thus contributing to endothelial dysfunction. This study was aimed to investigate the effects of Physalis minima L. leaves extract on serum NO levels, circulating EPCs number, and histopathology of tail artery endothelial cells in DOCA-salt-induced endothelial dysfunction in rats. Twenty-five male Wistar rats were randomly divided into five groups: rats without any treatment (normal, rats treated with DOCA (10 mg/kgBW s.c. twice weekly and given 0.9% NaCl to drink ad libitum for 6 weeks, and DOCA-salt-induced rats orally supplemented with P. minima leaves extract at doses of 500, 1500, or 2500 mg/kgBW for 4 weeks. Serum NO levels were measured by colorimetry. The number of circulating EPCs (CD34+/CD133+ cells was determined by flow cytometry. The tail artery sections were histologically processed with hematoxylin-eosin staining. DOCA-salt-induced rats showed significantly (p<0.05 decrease in serum NO levels and circulating EPCs number compared to the normal. There was also more detached tail artery endothelial cells in DOCA-salt-induced rats. P. minima leaves extract at a dose of 500 mg/kgBW significantly (p<0.05 increased serum NO level and circulating EPCs number, and also induced an optimal re-endothelialization in DOCA-salt-induced rats. P. minima leave extract dose-dependently increases NO bioavailability contributing to enhanced EPCs mobilization, thereby promoting re-endothelialization in DOCA-salt-induced endothelial dysfunction in rats.

Intracerebroventricular Infusion of the (Pro)renin Receptor Antagonist PRO20 Attenuates Deoxycorticosterone Acetate-Salt–Induced Hypertension

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Li, Wencheng; Sullivan, Michelle N.; Zhang, Sheng; Worker, Caleb J.; Xiong, Zhenggang; Speth, Robert C.; Feng, Yumei

2016-01-01

We previously reported that binding of prorenin to the (pro)renin receptor (PRR) plays a major role in brain angiotensin II formation and the development of deoxycorticosterone acetate (DOCA)-salt hypertension. Here, we designed and developed an antagonistic peptide, PRO20, to block prorenin binding to the PRR. Fluorescently labeled PRO20 bound to both mouse and human brain tissues with dissociation constants of 4.4 and 1.8 nmol/L, respectively. This binding was blocked by coincubation with prorenin and was diminished in brains of neuron-specific PRR-knockout mice, indicating specificity of PRO20 for PRR. In cultured human neuroblastoma cells, PRO20 blocked prorenin-induced calcium influx in a concentration- and AT1 receptor–dependent manner. Intracerebroventricular infusion of PRO20 dose-dependently inhibited prorenin-induced hypertension in C57Bl6/J mice. Furthermore, acute intracerebroventricular infusion of PRO20 reduced blood pressure in both DOCA-salt and genetically hypertensive mice. Chronic intracerebroventricular infusion of PRO20 attenuated the development of hypertension and the increase in brain hypothalamic angiotensin II levels induced by DOCA-salt. In addition, chronic intracerebroventricular infusion of PRO20 improved autonomic function and spontaneous baroreflex sensitivity in mice treated with DOCA-salt. In summary, PRO20 binds to both mouse and human PRRs and decreases angiotensin II formation and hypertension induced by either prorenin or DOCA-salt. Our findings highlight the value of the novel PRR antagonist, PRO20, as a lead compound for a novel class of antihypertensive agents and as a research tool to establish the validity of brain PRR antagonism as a strategy for treating hypertension. PMID:25421983

Intracerebroventricular infusion of the (Pro)renin receptor antagonist PRO20 attenuates deoxycorticosterone acetate-salt-induced hypertension.

Science.gov (United States)

Li, Wencheng; Sullivan, Michelle N; Zhang, Sheng; Worker, Caleb J; Xiong, Zhenggang; Speth, Robert C; Feng, Yumei

2015-02-01

We previously reported that binding of prorenin to the (pro)renin receptor (PRR) plays a major role in brain angiotensin II formation and the development of deoxycorticosterone acetate (DOCA)-salt hypertension. Here, we designed and developed an antagonistic peptide, PRO20, to block prorenin binding to the PRR. Fluorescently labeled PRO20 bound to both mouse and human brain tissues with dissociation constants of 4.4 and 1.8 nmol/L, respectively. This binding was blocked by coincubation with prorenin and was diminished in brains of neuron-specific PRR-knockout mice, indicating specificity of PRO20 for PRR. In cultured human neuroblastoma cells, PRO20 blocked prorenin-induced calcium influx in a concentration- and AT(1) receptor-dependent manner. Intracerebroventricular infusion of PRO20 dose-dependently inhibited prorenin-induced hypertension in C57Bl6/J mice. Furthermore, acute intracerebroventricular infusion of PRO20 reduced blood pressure in both DOCA-salt and genetically hypertensive mice. Chronic intracerebroventricular infusion of PRO20 attenuated the development of hypertension and the increase in brain hypothalamic angiotensin II levels induced by DOCA-salt. In addition, chronic intracerebroventricular infusion of PRO20 improved autonomic function and spontaneous baroreflex sensitivity in mice treated with DOCA-salt. In summary, PRO20 binds to both mouse and human PRRs and decreases angiotensin II formation and hypertension induced by either prorenin or DOCA-salt. Our findings highlight the value of the novel PRR antagonist, PRO20, as a lead compound for a novel class of antihypertensive agents and as a research tool to establish the validity of brain PRR antagonism as a strategy for treating hypertension. © 2014 American Heart Association, Inc.

Linking soil DOC production rates and transport processes from landscapes to sub-basin scales

Science.gov (United States)

Tian, Y. Q.; Yu, Q.; Li, J.; Ye, C.

2014-12-01

Recent research rejects the traditional perspective that dissolved organic carbon (DOC) component in global carbon cycle are simply trivial, and in fact evidence demonstrates that lakes likely mediate carbon dynamics on a global scale. Riverine and estuarine carbon fluxes play a critical role in transporting and recycling carbon and nutrients, not only within watersheds but in their receiving waters. However, the underlying mechanisms that drive carbon fluxes, from land to rivers, lake and oceans, remain poorly understood. This presentation will report a research result of the scale-dependent DOC production rate in coastal watersheds and DOC transport processes in estuarine regions. We conducted a series of controlled experiments and field measurements for examining biogeochemical, biological, and geospatial variables that regulate downstream processing on global-relevant carbon fluxes. Results showed that increased temperatures and raised soil moistures accelerate decomposition rates of organic matter with significant variations between vegetation types. The measurements at meso-scale ecosystem demonstrated a good correlation to bulk concentration of DOC monitored in receiving waters at the outlets of sub-basins (R2 > 0.65). These field and experimental measurements improved the model of daily carbon exports through below-ground processes as a function of the organic matter content of surface soils, forest litter supply, and temperature. The study demonstrated a potential improvement in modeling the co-variance of CDOM and DOC with the unique terrestrial sources. This improvement indicated a significant promise for monitoring riverine and estuarine carbon flux from satellite images. The technical innovations include deployments of 1) mini-ecosystem (mesocosms) with soil as replicate controlled experiments for DOC production and leaching rates, and 2) aquatic mesocosms for co-variances of DOC and CDOM endmembers, and an instrumented incubation experiment for

Spatial and Seasonal Variation of dissolved organic carbon (DOC) concentrations in Irish streams: importance of soil and topography characteristics.

Science.gov (United States)

Liu, Wen; Xu, Xianli; McGoff, Nicola M; Eaton, James M; Leahy, Paul; Foley, Nelius; Kiely, Gerard

2014-05-01

Dissolved organic carbon (DOC) concentrations have increased in many sites in Europe and North America in recent decades. High DOC concentrations can damage the structure and functions of aquatic ecosystems by influencing water chemistry. This study investigated the spatial and seasonal variation of DOC concentrations in Irish streams across 55 sites at seven time occasions over 1 year (2006/2007). The DOC concentrations ranged from 0.9 to 25.9 mg/L with a mean value of 6.8 and a median value of 5.7 mg/L and varied significantly over the course of the year. The DOC concentrations from late winter (February: 5.2 ± 3.0 mg/L across 55 sites) and early spring (April: 4.5 ± 3.5 mg/L) had significantly lower DOC concentrations than autumn (October: mean 8.3 ± 5.6 mg/L) and early winter (December: 8.3 ± 5.1 mg/L). The DOC production sources (e.g., litterfall) or the accumulation of DOC over dry periods might be the driving factor of seasonal change in Irish stream DOC concentrations. Analysis of data using stepwise multiple linear regression techniques identified the topographic index (TI, an indication of saturation-excess runoff potential) and soil conditions (organic carbon content and soil drainage characteristics) as key factors in controlling DOC spatial variation in different seasons. The TI and soil carbon content (e.g., soil organic carbon; peat occurrence) are positively related to DOC concentrations, while well-drained soils are negatively related to DOC concentrations. The knowledge of spatial and seasonal variation of DOC concentrations in streams and their drivers are essential for optimum riverine water resources management.

Degree of contribution (DoC) feature selection algorithm for structural brain MRI volumetric features in depression detection.

Science.gov (United States)

Kipli, Kuryati; Kouzani, Abbas Z

2015-07-01

Accurate detection of depression at an individual level using structural magnetic resonance imaging (sMRI) remains a challenge. Brain volumetric changes at a structural level appear to have importance in depression biomarkers studies. An automated algorithm is developed to select brain sMRI volumetric features for the detection of depression. A feature selection (FS) algorithm called degree of contribution (DoC) is developed for selection of sMRI volumetric features. This algorithm uses an ensemble approach to determine the degree of contribution in detection of major depressive disorder. The DoC is the score of feature importance used for feature ranking. The algorithm involves four stages: feature ranking, subset generation, subset evaluation, and DoC analysis. The performance of DoC is evaluated on the Duke University Multi-site Imaging Research in the Analysis of Depression sMRI dataset. The dataset consists of 115 brain sMRI scans of 88 healthy controls and 27 depressed subjects. Forty-four sMRI volumetric features are used in the evaluation. The DoC score of forty-four features was determined as the accuracy threshold (Acc_Thresh) was varied. The DoC performance was compared with that of four existing FS algorithms. At all defined Acc_Threshs, DoC outperformed the four examined FS algorithms for the average classification score and the maximum classification score. DoC has a good ability to generate reduced-size subsets of important features that could yield high classification accuracy. Based on the DoC score, the most discriminant volumetric features are those from the left-brain region.

A systematic examination of the relationships between CDOM and DOC in inland waters in China

Science.gov (United States)

Song, Kaishan; Zhao, Ying; Wen, Zhidan; Fang, Chong; Shang, Yingxin

2017-10-01

Chromophoric dissolved organic matter (CDOM) plays a vital role in the biogeochemical cycle in aquatic ecosystems. The relationship between CDOM and dissolved organic carbon (DOC) has been investigated, and this significant relationship lays the foundation for the estimation of DOC using remotely sensed imagery data. The current study examined samples from freshwater lakes, saline lakes, rivers and streams, urban water bodies, and ice-covered lakes in China for tracking the variation of the relationships between DOC and CDOM. The regression model slopes for DOC vs. aCDOM (275) ranged from extremely low 0.33 (highly saline lakes) to 1.03 (urban waters) and 3.01 (river waters). The low values were observed in saline lake waters and waters from semi-arid or arid regions, where strong photobleaching is expected due to less cloud cover, longer water residence time, and daylight hours. In contrast, high values were found in waters developed in wetlands or forest in Northeast China, where more organic matter was transported from catchment to waters. The study also demonstrated that closer relationships between CDOM and DOC were revealed when aCDOM (275) were sorted by the ratio of aCDOM(250)/aCDOM (365), which is a measure for the CDOM absorption with respect to its composition, and the determination of coefficient of the regression models ranged from 0.79 to 0.98 for different groups of waters. Our results indicate the relationships between CDOM and DOC are variable for different inland waters; thus, models for DOC estimation through linking with CDOM absorption need to be tailored according to water types.

Direct analysis of δ13C and concentration of dissolved organic carbon (DOC) in environmental samples by TOC-IRMS

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Kirkels, Frédérique; Cerli, Chiara; Federherr, Eugen; Kalbitz, Karsten

2014-05-01

Dissolved organic carbon (DOC) plays an important role in carbon cycling in terrestrial and aquatic systems. Stable isotope analysis (delta 13C) of DOC could provide valuable insights in its origin, fluxes and environmental fate. Precise and routine analysis of delta 13C and DOC concentration are therefore highly desirable. A promising, new system has been developed for this purpose, linking a high-temperature combustion TOC analyzer trough an interface with a continuous flow isotope ratio mass spectrometer (Elementar group, Hanau, Germany). This TOC-IRMS system enables simultaneous stable isotope (bulk delta 13C) and concentration analysis of DOC, with high oxidation efficiency by high-temperature combustion for complex mixtures as natural DOC. To give delta 13C analysis by TOC-IRMS the necessary impulse for broad-scale application, we present a detailed evaluation of its analytical performance for realistic and challenging conditions inclusive low DOC concentrations and environmental samples. High precision (standard deviation, SD predominantly TOC-IRMS and conventional EA-IRMS) were achieved by TOC-IRMS for a broad diversity of DOC solutions. This precision is comparable or even slightly better than that typically reported for EA-IRMS systems, and improves previous techniques for δ13C analysis of DOC. Simultaneously, very good precision was obtained for DOC concentration measurements. Assessment of natural abundance and slightly 13C enriched DOC, a wide range of concentrations (0.2-150 mgC/L) and injection volumes (0.05-3 ml), demonstrated good analytical performance with negligible memory effects, no concentration/volume effects and a wide linearity. Low DOC concentrations (TOC-IRMS was successfully applied to analyze DOC from diverse terrestrial, freshwater and marine environments (SD TOC-IRMS performs fast and reliable analysis of DOC concentration and δ13C in aqueous samples, without any pre-concentration/freeze-drying. Flexible usage is highlighted by

CDOM fluorescence as a proxy of DOC concentration in natural waters: a comparison of four contrasting tropical systems.

Science.gov (United States)

Rochelle-Newall, E; Hulot, F D; Janeau, J L; Merroune, A

2014-01-01

Chromophoric dissolved organic matter (CDOM) fluorescence or absorption is often proposed as a rapid alternative to chemical methods for the estimation of bulk dissolved organic carbon (DOC) concentration in natural waters. However, the robustness of this method across a wide range of systems remains to be shown. We measured CDOM fluorescence and DOC concentration in four tropical freshwater and coastal environments (estuary and coastal, tropical shallow lakes, water from the freshwater lens of two small islands, and soil leachates). We found that although this method can provide an estimation of DOC concentration in sites with low variability in DOC and CDOM sources in systems where the variability of DOC and CDOM sources are high, this method should not be used as it will lead to errors in the estimation of the bulk DOC concentration.

SPM analysis of parametric (R)-[11C]PK11195 binding images: plasma input versus reference tissue parametric methods.

Science.gov (United States)

Schuitemaker, Alie; van Berckel, Bart N M; Kropholler, Marc A; Veltman, Dick J; Scheltens, Philip; Jonker, Cees; Lammertsma, Adriaan A; Boellaard, Ronald

2007-05-01

(R)-[11C]PK11195 has been used for quantifying cerebral microglial activation in vivo. In previous studies, both plasma input and reference tissue methods have been used, usually in combination with a region of interest (ROI) approach. Definition of ROIs, however, can be labourious and prone to interobserver variation. In addition, results are only obtained for predefined areas and (unexpected) signals in undefined areas may be missed. On the other hand, standard pharmacokinetic models are too sensitive to noise to calculate (R)-[11C]PK11195 binding on a voxel-by-voxel basis. Linearised versions of both plasma input and reference tissue models have been described, and these are more suitable for parametric imaging. The purpose of this study was to compare the performance of these plasma input and reference tissue parametric methods on the outcome of statistical parametric mapping (SPM) analysis of (R)-[11C]PK11195 binding. Dynamic (R)-[11C]PK11195 PET scans with arterial blood sampling were performed in 7 younger and 11 elderly healthy subjects. Parametric images of volume of distribution (Vd) and binding potential (BP) were generated using linearised versions of plasma input (Logan) and reference tissue (Reference Parametric Mapping) models. Images were compared at the group level using SPM with a two-sample t-test per voxel, both with and without proportional scaling. Parametric BP images without scaling provided the most sensitive framework for determining differences in (R)-[11C]PK11195 binding between younger and elderly subjects. Vd images could only demonstrate differences in (R)-[11C]PK11195 binding when analysed with proportional scaling due to intersubject variation in K1/k2 (blood-brain barrier transport and non-specific binding).

panMetaDocs and DataSync - providing a convenient way to share and publish research data

Science.gov (United States)

Ulbricht, D.; Klump, J. F.

2013-12-01

In recent years research institutions, geological surveys and funding organizations started to build infrastructures to facilitate the re-use of research data from previous work. At present, several intermeshed activities are coordinated to make data systems of the earth sciences interoperable and recorded data discoverable. Driven by governmental authorities, ISO19115/19139 emerged as metadata standards for discovery of data and services. Established metadata transport protocols like OAI-PMH and OGC-CSW are used to disseminate metadata to data portals. With the persistent identifiers like DOI and IGSN research data and corresponding physical samples can be given unambiguous names and thus become citable. In summary, these activities focus primarily on 'ready to give away'-data, already stored in an institutional repository and described with appropriate metadata. Many datasets are not 'born' in this state but are produced in small and federated research projects. To make access and reuse of these 'small data' easier, these data should be centrally stored and version controlled from the very beginning of activities. We developed DataSync [1] as supplemental application to the panMetaDocs [2] data exchange platform as a data management tool for small science projects. DataSync is a JAVA-application that runs on a local computer and synchronizes directory trees into an eSciDoc-repository [3] by creating eSciDoc-objects via eSciDocs' REST API. DataSync can be installed on multiple computers and is in this way able to synchronize files of a research team over the internet. XML Metadata can be added as separate files that are managed together with data files as versioned eSciDoc-objects. A project-customized instance of panMetaDocs is provided to show a web-based overview of the previously uploaded file collection and to allow further annotation with metadata inside the eSciDoc-repository. PanMetaDocs is a PHP based web application to assist the creation of metadata in

Winter Ground Temperatures Control Snowmelt DOC Export From a Discontinuous Permafrost Watershed: A Multi-Year Perspective

Science.gov (United States)

Carey, S. K.

2006-12-01

For discontinuous and continuous permafrost watersheds, the largest mass flux of dissolved organic carbon (DOC) occurs during the snowmelt period. During this time, available allochtonous organic carbon that has accumulated over the winter in frozen organic soils is rapidly flushed to the basin outlet. While this process has been observed now in many river systems of different size and location, there have been few inter-annual reports on the mass of DOC loss and the factors controlling its variability during freshet. Hydrological and DOC fluxes were recorded for the 2002, 2003 and 2006 snowmelt season with supplementary over-winter data for an 8 square kilometer sub-basin (Granger Basin) of the Wolf Creek Research Basin, Yukon Territory, Canada. Granger Basin is an alpine catchment above treeline underlain with discontinuous permafrost (approximately 70 %) and has widespread surface organic soils up to 0.4 m in thickness. Pre-melt snow water equivalent varied widely throughout the basin, yet was greatest in 2006, followed by 2002 and 2003. Ground temperatures were notably colder throughout the 2003 winter compared with 2006 and 2002. For all years, discharge began in mid-May, and was a continuous event in 2002 and 2006. In 2003 four distinct melt-periods were observed due to rising and falling temperatures. During freshet, stream DOC concentration increased rapidly from 15 mg C/L on the first ascending limb of the hydrograph in each year. In 2003, DOC was largely flushed from the catchment several weeks prior to peak freshet. DOC concentration in wells and piezometers followed a similar pattern to streamflow DOC, with 2003 groundwater DOC concentrations less than 2002 and 2006. The total mass flux of DOC during freshet was 0.85, 0.45 and 1.01 g C/m2 for 2002, 2003 and 2006 respectively. Despite differences in pre-melt snow accumulation, the timing of melt and the volume of discharge, it appears that spring DOC export is largely controlled by over-winter ground

G-DOC: A Systems Medicine Platform for Personalized Oncology1

Science.gov (United States)

Madhavan, Subha; Gusev, Yuriy; Harris, Michael; Tanenbaum, David M; Gauba, Robinder; Bhuvaneshwar, Krithika; Shinohara, Andrew; Rosso, Kevin; Carabet, Lavinia A; Song, Lei; Riggins, Rebecca B; Dakshanamurthy, Sivanesan; Wang, Yue; Byers, Stephen W; Clarke, Robert; Weiner, Louis M

2011-01-01

Currently, cancer therapy remains limited by a “one-size-fits-all” approach, whereby treatment decisions are based mainly on the clinical stage of disease, yet fail to reference the individual's underlying biology and its role driving malignancy. Identifying better personalized therapies for cancer treatment is hindered by the lack of high-quality “omics” data of sufficient size to produce meaningful results and the ability to integrate biomedical data from disparate technologies. Resolving these issues will help translation of therapies from research to clinic by helping clinicians develop patient-specific treatments based on the unique signatures of patient's tumor. Here we describe the Georgetown Database of Cancer (G-DOC), a Web platform that enables basic and clinical research by integrating patient characteristics and clinical outcome data with a variety of high-throughput research data in a unified environment. While several rich data repositories for high-dimensional research data exist in the public domain, most focus on a single-data type and do not support integration across multiple technologies. Currently, G-DOC contains data from more than 2500 breast cancer patients and 800 gastrointestinal cancer patients, G-DOC includes a broad collection of bioinformatics and systems biology tools for analysis and visualization of four major “omics” types: DNA, mRNA, microRNA, and metabolites. We believe that G-DOC will help facilitate systems medicine by providing identification of trends and patterns in integrated data sets and hence facilitate the use of better targeted therapies for cancer. A set of representative usage scenarios is provided to highlight the technical capabilities of this resource. PMID:21969811

[11C]palmitate kinetics across the splanchnic bed in arterial, portal and hepatic venous plasma during fasting and euglycemic hyperinsulinemia

International Nuclear Information System (INIS)

Guiducci, Letizia; Jaervisalo, Mikko; Kiss, Jan; Nagren, Kjell; Viljanen, Antti; Naum, Alexandru G.; Gastaldelli, Amalia; Savunen, Timo; Knuuti, Juhani; Salvadori, Piero A.; Ferrannini, Ele; Nuutila, Pirjo; Iozzo, Patricia

2006-01-01

Purpose: The liver is fundamental in regulating lipid metabolism, and it supplies fatty acids (FA) to the rest of the body in the form of triglycerides (TG); the time-related relevance of this process is incompletely defined. The aim of the study was to investigate the appearance of labeled TG in the hepatic vascular bed after [ 11 C]palmitate injection during fasting and insulin stimulation. Methods: Plasma [ 11 C]palmitate kinetics in arterial, portal and hepatic venous lipid fractions was studied in eight anesthetized pigs during fasting or euglycemic hyperinsulinemia. Plasma analyses were conducted at 10 and 40 min after tracer injection. Corresponding liver positron emission tomography (PET) images were acquired for the semiquantitative determination of hepatic FA uptake. Results: At 10 min, plasma levels of unchanged [ 11 C]palmitate were lower in hyperinsulinemic than in fasting experiments in the artery and in the portal vein (P≤.03), suggesting faster clearance. Levels of unmetabolized [ 11 C]palmitate did not differ between portal and arterial plasma. In the fasting state, a tendency to a positive arterial and portal vs. hepatic venous gradient was observed, indicative of net hepatic [ 11 C]palmitate extraction. Labeled TG were already detectable at 10 min (fasting vs. hyperinsulinemia, ns) and were higher in fasting than in hyperinsulinemic animals at 40 min (92±1% and 82±6% of arterial plasma radioactivity). Higher proportions of labeled TG were recovered in portal vein plasma, suggesting release by the gut. The portal and the arterial-portal vs. hepatic venous TG gradient tended to be positive. Accordingly, hepatic FA uptake was higher, but declined more rapidly during fasting than during hyperinsulinemia. Conclusion: The study indicates that the redistribution of [ 11 C]palmitate between different lipid pools occurs within the short time interval of most PET experiments and is strongly influenced by insulin. Labeled TG constitute an additional

A systematic examination of the relationships between CDOM and DOC in inland waters in China

Directory of Open Access Journals (Sweden)

K. Song

2017-10-01

Full Text Available Chromophoric dissolved organic matter (CDOM plays a vital role in the biogeochemical cycle in aquatic ecosystems. The relationship between CDOM and dissolved organic carbon (DOC has been investigated, and this significant relationship lays the foundation for the estimation of DOC using remotely sensed imagery data. The current study examined samples from freshwater lakes, saline lakes, rivers and streams, urban water bodies, and ice-covered lakes in China for tracking the variation of the relationships between DOC and CDOM. The regression model slopes for DOC vs. aCDOM (275 ranged from extremely low 0.33 (highly saline lakes to 1.03 (urban waters and 3.01 (river waters. The low values were observed in saline lake waters and waters from semi-arid or arid regions, where strong photobleaching is expected due to less cloud cover, longer water residence time, and daylight hours. In contrast, high values were found in waters developed in wetlands or forest in Northeast China, where more organic matter was transported from catchment to waters. The study also demonstrated that closer relationships between CDOM and DOC were revealed when aCDOM (275 were sorted by the ratio of aCDOM(250∕aCDOM (365, which is a measure for the CDOM absorption with respect to its composition, and the determination of coefficient of the regression models ranged from 0.79 to 0.98 for different groups of waters. Our results indicate the relationships between CDOM and DOC are variable for different inland waters; thus, models for DOC estimation through linking with CDOM absorption need to be tailored according to water types.

The Fic protein Doc uses an inverted substrate to phosphorylate and inactivate EF-Tu.

Science.gov (United States)

Castro-Roa, Daniel; Garcia-Pino, Abel; De Gieter, Steven; van Nuland, Nico A J; Loris, Remy; Zenkin, Nikolay

2013-12-01

Fic proteins are ubiquitous in all of the domains of life and have critical roles in multiple cellular processes through AMPylation of (transfer of AMP to) target proteins. Doc from the doc-phd toxin-antitoxin module is a member of the Fic family and inhibits bacterial translation by an unknown mechanism. Here we show that, in contrast to having AMPylating activity, Doc is a new type of kinase that inhibits bacterial translation by phosphorylating the conserved threonine (Thr382) of the translation elongation factor EF-Tu, rendering EF-Tu unable to bind aminoacylated tRNAs. We provide evidence that EF-Tu phosphorylation diverged from AMPylation by antiparallel binding of the NTP relative to the catalytic residues of the conserved Fic catalytic core of Doc. The results bring insights into the mechanism and role of phosphorylation of EF-Tu in bacterial physiology as well as represent an example of the catalytic plasticity of enzymes and a mechanism for the evolution of new enzymatic activities.

The eDoc-Server Project Building an Institutional Repository for the Max Planck Society

CERN Document Server

Beier, Gerhard

2004-01-01

With the eDoc-Server the Heinz Nixdorf Center for Information Management in the Max Planck Society (ZIM) provides the research institutes of the Max Planck Society (MPS) with a platform to disseminate, store, and manage their scientific output. Moreover, eDoc serves as a tool to facilitate and promote open access to scientific information and primary sources. Since its introduction in October 2002 eDoc has gained high visibility within the MPS. It has been backed by strong institutional commitment to open access as documented in the 'Berlin Declaration on Open Access to the Data of the Sciences and Humanities', which was initiated by the MPS and found large support among major research organizations in Europe. This paper will outline the concept as well as the current status of the eDoc-Server, providing an example for the development and introduction of an institutional repository in a multi-disciplinary research organization.

A mobile water analysis laboratory for the study of stream nutrient and DOC dynamics

Science.gov (United States)

Echevarria Roman, Y.; Pullin, M. J.; Schwingle, R.; Gabrielsen, P. J.

2013-12-01

The dynamics of nutrient and dissolved organic carbon (DOC) quantity and composition in streams vary with season and in response to hydrologic events. Periodic grab sampling can capture some of this variation, but has also been shown to miss high flow events. Sampling during winter, during thunderstorms, and at night is difficult and sometimes hazardous. For these reasons, we have developed a mobile laboratory that autonomously determines pH, Eh, conductivity, dissolved oxygen, turbidity, nitrate, phosphate, DOC, DIC, as well as DOC fluorescence and absorbance continuously on a minutes timescale. The laboratory includes a Labview operated computer system that allows remote control and interaction with pumps, pressure, temperature, and flow sensors as well as the analytical instruments. Climate control allows for operation in winter. The design and operation of this laboratory will be presented. We will also discuss example data showing diurnal changes and responses to hydrologic events in DOC quantity and quality in the East Fork of the Jemez River, New Mexico.

Local and regional scale exchanges of dissolved organic carbon (DOC) between tidal wetlands and their adjacent coastal waters

Science.gov (United States)

Osburn, C. L.; Joshi, I.; Lebrasse, M. C.; Oviedo-Vargas, D.; Bianchi, T. S.; Bohnenstiehl, D. R.; D'Sa, E. J.; He, R.; Ko, D.; Arellano, A.; Ward, N. D.

2017-12-01

The contribution of blue carbon from tidal wetlands to the coastal ocean in the form of dissolved organic carbon (DOC) represents a terrestrial-aquatic linkage of increasing importance. DOC flux results will be presented from local (tidal creek) and regional (bays) scale studies in which various combinations of field observations, ocean-color satellite observations, and the outputs of high-resolution hydrodynamic models were used to estimate DOC export. The first project was located in Bald Head Creek, a tributary to the Cape Fear River estuary in eastern North Carolina (NC). DOC fluxes were computed using a bathymetric data collected via unmanned surface vehicle (USV) and a numerical hydrodynamic model (SCHISM) based on the relationships between colored dissolved organic matter (CDOM) absorption, DOC concentration, and salinity taken from field observations. Model predictions estimated an annual net export of DOC at 54 g C m-2 yr-1 from the tidal creek to the adjacent estuary. Carbon stable isotope (δ13C) values were used to estimate the contribution of wetland carbon to this export. In the second project, DOC fluxes from the Apalachicola Bay, FL, Barataria Bay, LA, were based on the development of algorithms between DOC and CDOM absorption derived from the VIIRS ocean color sensor. The Navy Coastal Ocean Model (NCOM) was used to compute salt flux estimates from each bay to the Louisiana-Texas shelf. The relationship between salinity and CDOM was used to estimate net annual DOC exports of 8.35 x 106 g C m-2 y-1 (Apalachicola Bay) and 7.14 x 106 g C m-2 yr-1 (Barataria Bay). These values approximate 13% and 9% of the annual loads of DOC from the Mississippi River to the Gulf of Mexico, respectively. CDOM and lignin were used in a mixing model to estimate wetland-derived DOC were 2% for Apalachicola Bay and 13% for Barataria Bay, the latter having one of the highest rates of relative sea level rise in North America. Results from our project demonstrated the utility

Does wildfire cause cascading effects on aquatic C cycling? A study of soil, well and lake DOC composition and bio/photolability

Science.gov (United States)

Olefeldt, D.; Turetsky, M. R.; Devito, K. J.; Blodau, C.

2012-12-01

In May 2011 a wildfire broke out north of Utikuma Lake in central Alberta, Canada, which eventually burned an area of ~880 km2. Wildfire alters soil properties, potentially altering the chemical composition of terrestrial DOC that reaches downstream aquatic environments. In order to study the potential effects of wildfire on lake carbon cycling, we sampled and incubated DOC from soil samples (n=52), wells (n=35) and lakes (n=32) from within and outside the recent fire perimeter. We incubated the DOC samples under both dark and UV conditions to assess both bio- and photolability, and followed DOC composition throughout the incubations by measuring DOC absorbing and fluorescing properties. A strong effect of wildfire was found among DOC samples leached from surface peatland and upland soils - with fire yielding increased DOC aromaticity associated with decreased biodegradability but also increased photolability. Parallel factor analysis of fluorescence matrices revealed distinct regions that were associated with DOC leached from charred soils, potentially linked to their lower biodegradability. Dark and UV conditions gave rise to very different trajectories of changes to DOC composition throughout incubations, with preferential losses of non-aromatic DOC under dark conditions and aromatic DOC under UV conditions. The DOC composition index that was found to best predict both DOC bio- and photolability was specific UV absorbance, which is also a very simple and quick index to measure. For lakes, we found that the primary influences on DOC composition and bio-/photolability was linked to lake size and hydrogeological setting (whether located on a lacustrine clay plain or in a moraine/outwash region) that controls groundwater influence and the hydrological connectivity to adjacent peatlands. Further analysis of well and lake water incubations will be used to detect whether wildfire can be detected to have a subtle secondary effect on DOC composition and lability or if

48 CFR 1335.016-70 - DOC procedures for the use of broad agency announcements.

Science.gov (United States)

2010-10-01

... 48 Federal Acquisition Regulations System 5 2010-10-01 2010-10-01 false DOC procedures for the use of broad agency announcements. 1335.016-70 Section 1335.016-70 Federal Acquisition Regulations System DEPARTMENT OF COMMERCE SPECIAL CATEGORIES OF CONTRACTING RESEARCH AND DEVELOPMENT CONTRACTING 1335.016-70 DOC...

Effect of light and nutrient availability on the release of dissolved organic carbon (DOC) by Caribbean turf algae

NARCIS (Netherlands)

Mueller, B.; den Haan, J.; Visser, P.M.; Vermeij, M.J.A.; van Duyl, F.C.

2016-01-01

Turf algae increasingly dominate benthic communities on coral reefs. Given their abundance and high dissolved organic carbon (DOC) release rates, turf algae are considered important contributors to the DOC pool on modern reefs. The release of photosynthetically fixed carbon as DOC generally, but not

Long-term changes in acidity and DOC in throughfall and soil water in Finnish forests.

Science.gov (United States)

Ukonmaanaho, Liisa; Starr, Mike; Lindroos, Antti-Jussi; Nieminen, Tiina M

2014-11-01

The main objective of this study was to examine if any detectable trends in dissolved organic carbon (DOC), sulphate (SO4-S) concentrations and acid neutralizing capacity (ANC) in throughfall (TF) and soil water (SW) could be found during 1990-2010 and to relate them to recent changes in decreased acid deposition. The study was conducted in seven boreal coniferous forest sites: four of which are managed and three unmanaged forests sites. Generally, temporal trend showed a significant decrease in SO4-S concentrations in bulk precipitation (BP), TF and SW. At some of the sites, there was an increasing tendency in BP and TF in the DOC concentrations. This feature coincides with decreasing SO4-S concentration, indicating that SO4-S may be an important driver of DOC release from the canopy. However, a slightly increased temperature, larger senescing needle mass and consequently increased decaying activity in the canopy may partly explain the increasing trend in DOC. In SW, no consistent DOC trend was seen. At some sites, the decreased base cation concentrations mostly account for the decrease in the ANC values in SW and TF.

Aging and temperature effects on DOC and elemental release from a metal contaminated soil

International Nuclear Information System (INIS)

Martinez, C.E.; Jacobson, A.R.; McBride, M.B.

2003-01-01

Increased aging and temperatures may affect DOC element complexes and their release. - The combined effect of time and temperature on elemental release and speciation from a metal contaminated soil (Master Old Site, MOS) was investigated. The soil was equilibrated at 10, 28, 45, 70 and 90 deg. C for 2 days, 2 weeks, and 2 months in the laboratory. Dissolved organic carbon (DOC), total soluble elements (by ICP), and labile metals (by DPASV) were determined in the filtered (0.22 μm) supernatants. For the samples equilibrated at 90 deg. C, DOC fractions were size fractionated by filtration and centrifugation; a subsample was only centrifuged while another was also filtered through a 0.45 μm filter. Analyses of the supernatants (ICP, DPASV, DOC) were performed on all size fraction subsamples. Dissolved organic carbon (DOC) increased both with temperature and incubation time; however, metal behavior was not as uniform. In general, total soluble metal release (ICP) paralleled the behavior of DOC, increasing with both time and temperature, and confirming the importance of soil organic matter (SOM) in metal retention. Voltammetric analysis (dpasv) of Cu and Zn showed that very little of these metals remains labile in solution due, presumably, to complexation with dissolved organic matter. Labile concentrations of Cd, on the other hand, constituted a significant portion (50%) of total soluble Cd. Copper and Al increased in solution with time (up to 2 months) and temperature up to 70 deg. C; however, at 90 deg. C the soluble concentration declined sharply. The same behavior was observed after equilibration for longer periods of time (550 days) at lower temperatures (23 and 70 deg. C). While concentrations of labile Cu and total soluble Cu and Al increased in the unfiltered samples, the trend remained the same. DPASV analysis showing shifts in labile Cu complexes with temperature and time, together with the results from the unfiltered samples, lead to the hypothesis that Cu

Hydrologic and forest management controls on DOC dynamics in the small watersheds of the H.J. Andrews Experimental Forest, OR

Science.gov (United States)

Lajtha, K.; Jones, J. A.

2016-12-01

Dissolved organic carbon (DOC) export from hillslopes to streams is an important component of the carbon cycle of a catchment and may be a critical source of energy for the aquatic food web in receiving waters. Using a long-term record of DOC and other dissolved nutrients and elements from paired watersheds from the H.J. Andrews Experimental Forest in Oregon, we explored hydrologic, climatic, and land-use controls on seasonal and inter-annual patterns of DOC flux in a seasonally dry ecosystem. Seasonal patterns of DOC flux demonstrated source limitations to DOC export, with DOC concentrations highest immediately following the first rains after a dry summer, and lowest after winter rains. In contrast, more geochemically-controlled elements showed simple dilution-concentration patterns with no seasonal hysteresis. Inter-annual patterns of DOC flux, however, did not provide evidence of source limitation, with DOC flux within a watershed tightly correlated to total discharge but not temperature. Among watersheds, forest harvest, even over 50 years ago, significantly reduced DOC flux but not fluxes of other elements including N; this response was linked to the loading of coarse woody debris to the forest floor. Chemical fingerprinting of DOC revealed that old-growth watersheds had higher fluxes of DOC characteristic of forest floor organic materials, likely delivered to streams through more surficial preferential flow pathways not subject to microbial alteration, respiration, or sorption losses. Taken together these results suggest that the biogeochemical composition of forested streams reflects both current hydrologic patterns and also processes that occurred many decades ago within the catchment.

Diurnal and seasonal DOC and POC variability in the land-locked sea

Directory of Open Access Journals (Sweden)

Beata Szymczycha

2017-07-01

Full Text Available Organic matter is a minor yet important component of the marine environment. The aim of this study was to investigate the diurnal and seasonal changes in dissolved and particulate organic carbon (DOC and POC, respectively. Thus, DOC and POC as well as chlorophyll a (Chl a, δ13C, NO3−, NO2−, NH4+, PO43−, salinity, pH, and temperature were regularly measured in samples collected for 24 h (2-h resolution in the Gdańsk Deep (54°44.730′N, 19°08.531′E at three water depths (1, 10, and 40 m during sampling campaigns in 2011 (May, 2014 (May, and 2015 (January, March, May, July, September, November. Seasonal variations in DOC and POC followed the seasonality of Chl a (proportional trend and nutrients (reverse trend concentrations. Diurnal oscillations were detected in six out of the eight measurement series. The strongest diurnal variability in both POC and DOC occurred in May 2011 and March 2015, when phytoplankton activity was highest (high Chl a. The surprisingly low δ13C values (range: −28‰ to −24‰ measured over the course of the study revealed the gaps in our knowledge of the isotopic characteristics of terrestrial- vs. marine-derived particulate organic matter.

Declines in the dissolved organic carbon (DOC) concentration and flux from the UK

Science.gov (United States)

Worrall, Fred; Howden, Nicholas J. K.; Burt, Tim P.; Bartlett, Rebecca

2018-01-01

Increased concentrations of dissolved organic carbon (DOC) have been reported for many catchments across the northern hemisphere. Hypotheses to explain the increase have varied (eg. increasing air temperature or recovery from acidification) but one test of alternative hypotheses is the trend over the recent decade, with the competing hypotheses predicting: continuing increase; the rate of increase declining with time; and even decrease in concentration. In this study, records of DOC concentration in non-tidal rivers across the UK were examined for the period 2003-2012. The study found that: Of the 62 decade-long concentration trends that could be examined, 3 showed a significant increase, 17 experienced no significant change and 42 showed a significant decrease; in 28 of the 42 significant decreases, a significant step change was apparent with step changes being a decrease in concentration in every case. Of the 118 sites where annual flux and concentration records were available from 1974, 28 showed a significant step change down in flux and 52 showed a step down in concentration. The modal year of the step changes was 2000 with no step changes observed before 1982. At the UK national scale, DOC flux peaked in 2005 at 1354 ktonnes C/yr (5.55 tonnes C/km2/yr) but has declined since. The study suggests that there is a disconnection between DOC records from large catchments at their tidal limits and complementary records from headwater catchments, which means that mechanisms believed to be driving increases in DOC concentrations in headwaters will not necessarily be those controlling trends in DOC concentration further downstream. We propose that the changes identified here have been driven by changes in in-stream processing and changes brought about by the Urban Waste Water Treatment Directive. Therefore, signals identified in headwater catchments may bear little relation to those observed in large rivers much further downstream and vice versa.

The role of forest type in the variability of DOC in atmospheric deposition at forest plots in Italy.

Science.gov (United States)

Arisci, S; Rogora, M; Marchetto, A; Dichiaro, F

2012-06-01

Dissolved organic carbon (DOC) was studied in atmospheric deposition samples collected on a weekly basis in 2005-2009 at 10 forest plots in Italy. The plots covered a wide range of geographical attributes and were representative of the main forest types in Italy. Both spatial and temporal variations in DOC concentrations and fluxes are discussed, with the aim of identifying the main factors affecting DOC variability. DOC concentration increased from bulk to throughfall and stemflow water samples at all sites, as an effect of leaching from leaves and branches, going from 0.7-1.7 mg C L(-1) in bulk samples to 1.8-15.8 mg C L(-1) in throughfall and 4.2-10.7 mg C L(-1) in stemflow, with striking differences among the various plots. Low concentrations were found in runoff (0.5-2.0 mg C L(-1)), showing that the export of DOC via running waters was limited. The seasonality of DOC in throughfall samples was evident, with the highest concentration in summer when biological activity is at a maximum, and minima in winter due to limited DOC production and leaching. Statistical analysis revealed that DOC had a close relationship with organic and total nitrogen, and with nutrient ions, and a negative correlation with precipitation amount. Forest type proved to be a major factor affecting DOC variability: concentration and, to a lesser extent, fluxes were lower in stands dominated by deciduous species. The character of evergreens, and the size and shape of their leaves and needles, which regulate the interception mechanism of dry deposition, are mainly responsible for this.

Time-of-flight measurements of the plasma density in the T-11M tokamak

International Nuclear Information System (INIS)

Petrov, V. G.; Petrov, A. A.; Malyshev, A. Yu.; Markov, V. K.; Babarykin, A. V.

2006-01-01

The average plasma density in the T-11M tokamak is determined by means of an O-mode time-of-flight refractometer measuring the propagation time τ of microwave pulses through the plasma. Since the front duration τ fr of these pulses is shorter than 2 ns, filtering the measured signal cannot reduce the signal-to-noise ratio below a certain level. This circumstance impedes the use of this diagnostics in larger devices, where the signals may be substantially attenuated because of the larger chamber size and larger waveguide losses. There are several ways to overcome these difficulties: to raise the microwave power, to increase the sensitivity of the receivers, etc. In this paper, a technique is described that is based on the differential method for determining the propagation time of a microwave signal through the plasma. In this method, the plasma is probed by two continuous microwaves with close frequencies and the phase difference between them Δφ 12 is measured. As long as the condition Δφ 12 < 2π is satisfied, the measurements are unambiguous, because there are no phase jumps by a value multiple of 2π, as is usually the case in conventional interferometers at an increased level of MHD activity, in regimes with a rapid density growth, etc. This method allows the signal to be filtered, thereby ensuring an appreciable improvement in the signal-to-noise ratio in comparison with the pulsed methods. The first measurements of the average density along the +3-cm chord were performed with the help of this new differential time-of-flight refractometer in the T-11M tokamak. The refractometry data agree well with the interferometric data and are used to recover the plasma-density profile

Impact of catchment geophysical characteristics and climate on the regional variability of dissolved organic carbon (DOC) in surface water.

Science.gov (United States)

Cool, Geneviève; Lebel, Alexandre; Sadiq, Rehan; Rodriguez, Manuel J

2014-08-15

Dissolved organic carbon (DOC) is a recognized indicator of natural organic matter (NOM) in surface waters. The aim of this paper is twofold: to evaluate the impact of geophysical characteristics, climate and ecological zones on DOC concentrations in surface waters and, to develop a statistical model to estimate the regional variability of these concentrations. In this study, multilevel statistical analysis was used to achieve three specific objectives: (1) evaluate the influence of climate and geophysical characteristics on DOC concentrations in surface waters; (2) compare the influence of geophysical characteristics and ecological zones on DOC concentrations in surface waters; and (3) develop a model to estimate the most accurate DOC concentrations in surface waters. The case study involved 115 catchments from surface waters in the Province of Quebec, Canada. Results showed that mean temperatures recorded 60 days prior to sampling, total precipitation 10 days prior to sampling and percentages of wetlands, coniferous forests and mixed forests have a significant positive influence on DOC concentrations in surface waters. The catchment mean slope had a significant negative influence on DOC concentrations in surface waters. Water type (lake or river) and deciduous forest variables were not significant. The ecological zones had a significant influence on DOC concentrations. However, geophysical characteristics (wetlands, forests and slope) estimated DOC concentrations more accurately. A model describing the variability of DOC concentrations was developed and can be used, in future research, for estimating DBPs in drinking water as well evaluating the impact of climate change on the quality of surface waters and drinking water. Copyright © 2014 Elsevier B.V. All rights reserved.

Overexpression of DOC-1R inhibits cell cycle G1/S transition by repressing CDK2 expression and activation.

Science.gov (United States)

Liu, Qi; Liu, Xing; Gao, Jinlan; Shi, Xiuyan; Hu, Xihua; Wang, Shusen; Luo, Yang

2013-01-01

DOC-1R (deleted in oral cancer-1 related) is a novel putative tumor suppressor. This study investigated DOC-1R antitumor activity and the underlying molecular mechanisms. Cell phenotypes were assessed using flow cytometry, BrdU incorporation and CDK2 kinase assays in DOC-1R overexpressing HeLa cells. In addition, RT-PCR and Western blot assays were used to detect underlying molecular changes in these cells. The interaction between DOC-1R and CDK2 proteins was assayed by GST pull-down and immunoprecipitation-Western blot assays. The data showed that DOC-1R overexpression inhibited G1/S phase transition, DNA replication and suppressed CDK2 activity. Molecularly, DOC-1R inhibited CDK2 expression at the mRNA and protein levels, and there were decreased levels of G1-phase cyclins (cyclin D1 and E) and elevated levels of p21, p27, and p53 proteins. Meanwhile, DOC-1R associated with CDK2 and inhibited CDK2 activation by obstructing its association with cyclin E and A. In conclusion, the antitumor effects of DOC-1R may be mediated by negatively regulating G1 phase progression and G1/S transition through inhibiting CDK2 expression and activation.

[{sup 11}C]palmitate kinetics across the splanchnic bed in arterial, portal and hepatic venous plasma during fasting and euglycemic hyperinsulinemia

Energy Technology Data Exchange (ETDEWEB)

Guiducci, Letizia [SSSUP Medical Sciences Branch, Pisa 56100 (Italy); Turku PET Centre, University of Turku, Turku 20520 (Finland); PET Centre, Institute of Clinical Physiology, CNR National Research Council, 56100 Pisa (Italy); Jaervisalo, Mikko [Turku PET Centre, University of Turku, Turku 20520 (Finland); Kiss, Jan [Turku PET Centre, University of Turku, Turku 20520 (Finland); Department of Surgery, University of Turku, Turku 20520 (Finland); Nagren, Kjell [Turku PET Centre, University of Turku, Turku 20520 (Finland); Viljanen, Antti [Turku PET Centre, University of Turku, Turku 20520 (Finland); Naum, Alexandru G. [Turku PET Centre, University of Turku, Turku 20520 (Finland); Gastaldelli, Amalia [PET Centre, Institute of Clinical Physiology, CNR National Research Council, 56100 Pisa (Italy); Savunen, Timo [Department of Surgery, University of Turku, Turku 20520 (Finland); Knuuti, Juhani [Turku PET Centre, University of Turku, Turku 20520 (Finland); Salvadori, Piero A. [PET Centre, Institute of Clinical Physiology, CNR National Research Council, 56100 Pisa (Italy); Ferrannini, Ele [PET Centre, Institute of Clinical Physiology, CNR National Research Council, 56100 Pisa (Italy); Department of Internal Medicine, University of Pisa School of Medicine, Pisa 56100 (Italy); Nuutila, Pirjo [Turku PET Centre, University of Turku, Turku 20520 (Finland); Department of Medicine, University of Turku, Turku 20520 (Finland); Iozzo, Patricia [Turku PET Centre, University of Turku, Turku 20520 (Finland) and PET Centre, Institute of Clinical Physiology, CNR National Research Council, 56100 Pisa (Italy)]. E-mail: patricia.iozzo@ifc.cnr.it

2006-05-15

Purpose: The liver is fundamental in regulating lipid metabolism, and it supplies fatty acids (FA) to the rest of the body in the form of triglycerides (TG); the time-related relevance of this process is incompletely defined. The aim of the study was to investigate the appearance of labeled TG in the hepatic vascular bed after [{sup 11}C]palmitate injection during fasting and insulin stimulation. Methods: Plasma [{sup 11}C]palmitate kinetics in arterial, portal and hepatic venous lipid fractions was studied in eight anesthetized pigs during fasting or euglycemic hyperinsulinemia. Plasma analyses were conducted at 10 and 40 min after tracer injection. Corresponding liver positron emission tomography (PET) images were acquired for the semiquantitative determination of hepatic FA uptake. Results: At 10 min, plasma levels of unchanged [{sup 11}C]palmitate were lower in hyperinsulinemic than in fasting experiments in the artery and in the portal vein (P{<=}.03), suggesting faster clearance. Levels of unmetabolized [{sup 11}C]palmitate did not differ between portal and arterial plasma. In the fasting state, a tendency to a positive arterial and portal vs. hepatic venous gradient was observed, indicative of net hepatic [{sup 11}C]palmitate extraction. Labeled TG were already detectable at 10 min (fasting vs. hyperinsulinemia, ns) and were higher in fasting than in hyperinsulinemic animals at 40 min (92{+-}1% and 82{+-}6% of arterial plasma radioactivity). Higher proportions of labeled TG were recovered in portal vein plasma, suggesting release by the gut. The portal and the arterial-portal vs. hepatic venous TG gradient tended to be positive. Accordingly, hepatic FA uptake was higher, but declined more rapidly during fasting than during hyperinsulinemia. Conclusion: The study indicates that the redistribution of [{sup 11}C]palmitate between different lipid pools occurs within the short time interval of most PET experiments and is strongly influenced by insulin. Labeled TG

The importance of the relationship between scale and process in understanding long-term DOC dynamics.

Science.gov (United States)

Clark, J M; Bottrell, S H; Evans, C D; Monteith, D T; Bartlett, R; Rose, R; Newton, R J; Chapman, P J

2010-06-01

Concentrations of dissolved organic carbon have increased in many, but not all, surface waters across acid impacted areas of Europe and North America over the last two decades. Over the last eight years several hypotheses have been put forward to explain these increases, but none are yet accepted universally. Research in this area appears to have reached a stalemate between those favouring declining atmospheric deposition, climate change or land management as the key driver of long-term DOC trends. While it is clear that many of these factors influence DOC dynamics in soil and stream waters, their effect varies over different temporal and spatial scales. We argue that regional differences in acid deposition loading may account for the apparent discrepancies between studies. DOC has shown strong monotonic increases in areas which have experienced strong downward trends in pollutant sulphur and/or seasalt deposition. Elsewhere climatic factors, that strongly influence seasonality, have also dominated inter-annual variability, and here long-term monotonic DOC trends are often difficult to detect. Furthermore, in areas receiving similar acid loadings, different catchment characteristics could have affected the site specific sensitivity to changes in acidity and therefore the magnitude of DOC release in response to changes in sulphur deposition. We suggest that confusion over these temporal and spatial scales of investigation has contributed unnecessarily to the disagreement over the main regional driver(s) of DOC trends, and that the data behind the majority of these studies is more compatible than is often conveyed. Copyright (c) 2010 Elsevier B.V. All rights reserved.

Shedding light on DOC release by benthic primary producers and its consumption by bioeroding sponges

NARCIS (Netherlands)

Müller, Benjamin

2015-01-01

The effect of light on dissolved organic carbon (DOC) release of benthic primary producers (BPPs) was investigated on the coral reefs of Curaçao. Incubation experiments revealed a positive relation between the DOC release of four Caribbean reef algae (Cladophora sp., Dictyota menstrualis, Lobophora

Doc of prophage P1 is inhibited by its antitoxin partner Phd through fold complementation

DEFF Research Database (Denmark)

Garcia-Pino, Abel; Christensen-Dalsgaard, Mikkel; Wyns, Lode

2008-01-01

Prokaryotic toxin-antitoxin modules are involved in major physiological events set in motion under stress conditions. The toxin Doc (death on curing) from the phd/doc module on phage P1 hosts the C-terminal domain of its antitoxin partner Phd (prevents host death) through fold complementation....... This Phd domain is intrinsically disordered in solution and folds into an alpha-helix upon binding to Doc. The details of the interactions reveal the molecular basis for the inhibitory action of the antitoxin. The complex resembles the Fic (filamentation induced by cAMP) proteins and suggests a possible......-antitoxin locus for its action in vivo....

ORCHIDEE-SOM: modeling soil organic carbon (SOC) and dissolved organic carbon (DOC) dynamics along vertical soil profiles in Europe

Science.gov (United States)

Camino-Serrano, Marta; Guenet, Bertrand; Luyssaert, Sebastiaan; Ciais, Philippe; Bastrikov, Vladislav; De Vos, Bruno; Gielen, Bert; Gleixner, Gerd; Jornet-Puig, Albert; Kaiser, Klaus; Kothawala, Dolly; Lauerwald, Ronny; Peñuelas, Josep; Schrumpf, Marion; Vicca, Sara; Vuichard, Nicolas; Walmsley, David; Janssens, Ivan A.

2018-03-01

Current land surface models (LSMs) typically represent soils in a very simplistic way, assuming soil organic carbon (SOC) as a bulk, and thus impeding a correct representation of deep soil carbon dynamics. Moreover, LSMs generally neglect the production and export of dissolved organic carbon (DOC) from soils to rivers, leading to overestimations of the potential carbon sequestration on land. This common oversimplified processing of SOC in LSMs is partly responsible for the large uncertainty in the predictions of the soil carbon response to climate change. In this study, we present a new soil carbon module called ORCHIDEE-SOM, embedded within the land surface model ORCHIDEE, which is able to reproduce the DOC and SOC dynamics in a vertically discretized soil to 2 m. The model includes processes of biological production and consumption of SOC and DOC, DOC adsorption on and desorption from soil minerals, diffusion of SOC and DOC, and DOC transport with water through and out of the soils to rivers. We evaluated ORCHIDEE-SOM against observations of DOC concentrations and SOC stocks from four European sites with different vegetation covers: a coniferous forest, a deciduous forest, a grassland, and a cropland. The model was able to reproduce the SOC stocks along their vertical profiles at the four sites and the DOC concentrations within the range of measurements, with the exception of the DOC concentrations in the upper soil horizon at the coniferous forest. However, the model was not able to fully capture the temporal dynamics of DOC concentrations. Further model improvements should focus on a plant- and depth-dependent parameterization of the new input model parameters, such as the turnover times of DOC and the microbial carbon use efficiency. We suggest that this new soil module, when parameterized for global simulations, will improve the representation of the global carbon cycle in LSMs, thus helping to constrain the predictions of the future SOC response to global

Careers and Networking: Professional Development for Graduate Students and Post-docs

Science.gov (United States)

Jungbluth, S.; Boiteau, R.; Bottjer, D.; De Leo, F. C.; Hawko, N.; Ilikchyan, I.; Bruno, B. C.

2013-12-01

Established in 2006 by the National Science Foundation, the Center for Microbial Oceanography: Research and Education (C-MORE) is a multi-institutional Science and Technology Center based at the University of Hawai i. One of C-MORE's missions is to provide graduate students and post-docs with state-of-the-art training, which primarily occurs through laboratory- and field-based research. Additionally, C-MORE offers a Professional Development Training Program (PDTP) to help students and post-docs develop a range of "soft" skills such as science communication, leadership, proposal writing, teaching and mentoring (Bruno et al, 2013). The PDTP not only provides professional development training to graduate students and post-docs, but also encourages these young scientists to take leadership of their training. The Professional Development Organizing Committee (PDOC), composed of students and post-docs across the various C-MORE institutions, works closely with the Education Office to implement the eight core PDTP modules as well as 'on-demand' workshops. In February 2013, we organized a workshop to promote networking and foster scientific collaborations among C-MORE graduate students and post-doctoral researchers at the seven partner institutions: the University of Hawaii, Massachusetts Institute of Technology, Woods Hole Oceanographic Institution, Oregon State University, University of California Santa Cruz, Monterey Bay Aquarium Research Institute and Columbia University. The workshop was held in New Orleans in conjunction with the 2013 ASLO/ Ocean Sciences national meeting. In this paper, we will describe the student-led planning process, the workshop itself, and evaluation results. We will also present examples of some of the collaborations that resulted from this workshop.

Biotransformation of the mineralocorticoid receptor antagonists spironolactone and canrenone by human CYP11B1 and CYP11B2: Characterization of the products and their influence on mineralocorticoid receptor transactivation.

Science.gov (United States)

Schiffer, Lina; Müller, Anne-Rose; Hobler, Anna; Brixius-Anderko, Simone; Zapp, Josef; Hannemann, Frank; Bernhardt, Rita

2016-10-01

Spironolactone and its major metabolite canrenone are potent mineralocorticoid receptor antagonists and are, therefore, applied as drugs for the treatment of primary aldosteronism and essential hypertension. We report that both compounds can be converted by the purified adrenocortical cytochromes P450 CYP11B1 and CYP11B2, while no conversion of the selective mineralocorticoid receptor antagonist eplerenone was observed. As their natural function, CYP11B1 and CYP11B2 carry out the final steps in the biosynthesis of gluco- and mineralocorticoids. Dissociation constants for the new exogenous substrates were determined by a spectroscopic binding assay and demonstrated to be comparable to those of the natural substrates, 11-deoxycortisol and 11-deoxycorticosterone. Metabolites were produced at preparative scale with a CYP11B2-dependent Escherichia coli whole-cell system and purified by HPLC. Using NMR spectroscopy, the metabolites of spironolactone were identified as 11β-OH-spironolactone, 18-OH-spironolactone and 19-OH-spironolactone. Canrenone was converted to 11β-OH-canrenone, 18-OH-canrenone as well as to the CYP11B2-specific product 11β,18-diOH-canrenone. Therefore, a contribution of CYP11B1 and CYP11B2 to the biotransformation of drugs should be taken into account and the metabolites should be tested for their potential toxic and pharmacological effects. A mineralocorticoid receptor transactivation assay in antagonist mode revealed 11β-OH-spironolactone as pharmaceutically active metabolite, whereas all other hydroxylation products negate the antagonist properties of spironolactone and canrenone. Thus, human CYP11B1 and CYP11B2 turned out to metabolize steroid-based drugs additionally to the liver-dependent biotransformation of drugs. Compared with the action of the parental drug, changed properties of the metabolites at the target site have been observed. Copyright © 2016 Elsevier Ltd. All rights reserved.

Anticipation and consumption of food each increase the concentration of neuroactive steroids in rat brain and plasma.

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Pisu, Maria Giuseppina; Floris, Ivan; Maciocco, Elisabetta; Serra, Mariangela; Biggio, Giovanni

2006-09-01

Stressful stimuli and anxiogenic drugs increase the plasma and brain concentrations of neuroactive steroids. Moreover, in rats trained to consume their daily meal during a fixed period, the anticipation of food is associated with changes in the function of various neurotransmitter systems. We have now evaluated the effects of anticipation and consumption of food in such trained rats on the plasma and brain concentrations of 3alpha-hydroxy-5alpha-pregnan-20-one (3alpha,5alpha-TH PROG) and 3alpha,21-dihydroxy-5alpha-pregnan-20-one (3alpha,5alpha-TH DOC), two potent endogenous positive modulators of type A receptors for gamma-aminobutyric acid (GABA). The abundance of these neuroactive steroids was increased in both the cerebral cortex and plasma of the rats during both food anticipation and consumption. In contrast, the concentration of their precursor, progesterone, was increased in the brain only during food consumption, whereas it was increased in plasma only during food anticipation. Intraperitoneal administration of the selective agonist abecarnil (0.1 mg/kg) 40 min before food presentation prevented the increase in the brain levels of 3alpha,5alpha-TH PROG and 3alpha,5alpha-TH DOC during food anticipation but not that associated with consumption. The change in emotional state associated with food anticipation may thus result in an increase in the plasma and brain levels of 3alpha,5alpha-TH PROG and 3alpha,5alpha-TH DOC in a manner sensitive to the activation of GABA(A) receptor-mediated neurotransmission. A different mechanism, insensitive to activation of such transmission, may underlie the changes in the concentrations of these neuroactive steroids during food consumption.

Absorption features of chromophoric dissolved organic matter (CDOM) and tracing implication for dissolved organic carbon (DOC) in Changjiang Estuary, China

OpenAIRE

Zhang, X. Y.; Chen, X.; Deng, H.; Du, Y.; Jin, H. Y.

2013-01-01

Chromophoric dissolved organic matter (CDOM) represents the light absorbing fraction of dissolved organic carbon (DOC). Studies have shown that the optical properties of CDOM can be used to infer the distribution and diffusion characteristics of DOC in the estuary and coastal zone. The inversion of DOC concentrations from remote sensing has been implemented in certain regions. In this study we investigate the potential of tracing DOC from CDOM by the measure...

The purification step is not crucial in EIA measurements of thromboxane B2 and 11-dehydrothromboxane B2 in human plasma.

Science.gov (United States)

Sadilkova, Lenka; Paluch, Zoltan; Mottlova, Jirina; Bednar, Frantisek; Alusik, Stefan

2012-01-01

Thromboxane B2 (TxB2) and particularly 11-dehydrothromboxane B2 (11-dTxB2) are widely used as prognostic risk markers of platelet activation in cardiovascular diseases. The main errors in TxB2 and 11-dTxB2 determination include either low concentrations of circulating TxB2 (1 - 2 pg/mL) and 11-dTxB2 (0.9 - 4.3 pg/mL) or rather high transiency (mean TxB2 half-life is approximately 5 minutes) as well as an incorrect pre-analytical phase set up. The aim of this study was to investigate the impact of a widely used purification step on the results of enzyme immunosorbent assay (EIA)--based measurement of the two selected thromboxanes. For the purpose of this study, 20 plasma samples (10 healthy donors, 10 patients under treatment with acetylsalicylic acid) were screened for TxB2 and 11-dTxB2 concentrations using commercial competitive EIA kits (Cayman Chemicals, Tallinn, Estonia; Neogen, Lexington, KY, USA) with or without the introduction of the purification procedure. The purification step does not significantly affect the results of EIA measurements of the two of TxA2 metabolites (TxB2, 11-dTxB2) in human plasma. The levels of TxB2 and 11-dTxB2 determined in the plasma samples were not significantly changed (p < 0.05) when the purification step was omitted compared to the purified samples. This study establishes a protocol allowing for reliable and reproducible plasma TxB2 and 11-dTxB2 EIA measurement for routine basic screening of platelet function.

Insulin promotes Rip11 accumulation at the plasma membrane by inhibiting a dynamin- and PI3-kinase-dependent, but Akt-independent, internalisation event.

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Boal, Frédéric; Hodgson, Lorna R; Reed, Sam E; Yarwood, Sophie E; Just, Victoria J; Stephens, David J; McCaffrey, Mary W; Tavaré, Jeremy M

2016-01-01

Rip11 is a Rab11 effector protein that has been shown to be important in controlling the trafficking of several intracellular cargoes, including the fatty acid transporter FAT/CD36, V-ATPase and the glucose transporter GLUT4. We have previously demonstrated that Rip11 translocates to the plasma membrane in response to insulin and here we examine the basis of this regulated phenomenon in more detail. We show that Rip11 rapidly recycles between the cell interior and surface, and that the ability of insulin to increase the appearance of Rip11 at the cell surface involves an inhibition of Rip11 internalisation from the plasma membrane. By contrast the hormone has no effect on the rate of Rip11 translocation towards the plasma membrane. The ability of insulin to inhibit Rip11 internalisation requires dynamin and class I PI3-kinases, but is independent of the activation of the protein kinase Akt; characteristics which are very similar to the mechanism by which insulin inhibits GLUT4 endocytosis. Copyright © 2015. Published by Elsevier Inc.

Fusion programs in applied plasma physics. Technical progress report, July 11, 1992--May 31, 1993

Energy Technology Data Exchange (ETDEWEB)

1993-07-01

This report summarizes the progress made in theoretical and experimental research funded by US Department of Energy Grant No. DE-FG03-92ER54150, during the period July 11, 1992 through May 31, 1993. Four main tasks are reported: applied plasma physics theory, alpha particle diagnostic, edge and current density diagnostic, and plasma rotation drive. The report also discusses the research plans for the theory and experimental programs for the next grant year. Reports and publications supported by the grant during this period are listed in the final section.

Regionalizando a produção de documentários – DocTV

Directory of Open Access Journals (Sweden)

Karla Holanda

2013-12-01

Full Text Available DocTV Program was a project created and carried out by Brazilian Ministry of Culture (2003-2010. Documentaries on DocTV were produced in each state and exhibited on the national network by way of public stations. This regional character in their production and exhibition is rare in the history of relationship between television and independent production in Brazil. This paper details the Program’s operation as well as its guiding principles and results.

Development and psychometric properties of the Shared Decision Making Questionnaire--physician version (SDM-Q-Doc).

Science.gov (United States)

Scholl, Isabelle; Kriston, Levente; Dirmaier, Jörg; Buchholz, Angela; Härter, Martin

2012-08-01

To develop and psychometrically test a brief instrument for assessing the physician's perspective of the shared decision-making process in clinical encounters. We adapted the 9-item Shared Decision Making Questionnaire (SDM-Q-9) for patients to generate a new version for physicians (SDM-Q-Doc). The physician version was tested in clinical encounters between 29 physicians and 324 patients in German outpatient care contexts. Analyses of the extent to which the instrument was accepted, the reliability of the instrument, and the factorial structure of the scale were performed. Physicians showed a high level of acceptance toward the SDM-Q-Doc. Item discrimination parameters were above .4 for all but one item. An analysis of internal consistency yielded a Cronbach's α of .88. Factor analysis confirmed a one-dimensional structure. The results of this study suggest that the SDM-Q-Doc is a well-accepted and reliable instrument for assessing the physician's perspective during SDM processes in clinical encounters. To our knowledge, the SDM-Q-Doc is the first psychometrically tested scale available for assessing the physician's perspective. The SDM-Q-Doc can be used in studies that analyze the effectiveness of the implementation of SDM and as a quality indicator in quality assurance programs and health service assessments. Copyright © 2012 Elsevier Ireland Ltd. All rights reserved.

Temporal-spatial variation of DOC concentration, UV absorbance and the flux estimation in the Lower Dagu River, China

Science.gov (United States)

Xi, Min; Kong, Fanlong; Li, Yue; Kong, Fanting

2017-12-01

Dissolved organic carbon (DOC) is an important component for both carbon cycle and energy balance. The concentration, UV absorbance, and export flux of DOC in the natural environment dominate many important transport processes. To better understand the temporal and spatial variation of DOC, 7 sites along the Lower Dagu River were chosen to conduct a comprehensive measurement from March 2013 to February 2014. Specifically, water samples were collected from the Lower Dagu River between the 26th and 29th of every month during the experimental period. The DOC concentration (CDOC) and UV absorbance were analyzed using a total organic carbon analyzer and the ultraviolet-visible absorption spectrum, and the DOC export flux was estimated with a simple empirical model. The results showed that the CDOC of the Lower Dagu River varied from 1.32 to 12.56 mg/L, consistent with global rivers. The CDOC and UV absorbance showed significant spatial variation in the Dagu River during the experiential period because of the upstream natural processes and human activities in the watershed. The spatial variation is mainly due to dam or reservoir constructions, riverside ecological environment changes, and non-point source or wastewater discharge. The seasonal variation of CDOC was mainly related to the source of water DOC, river runoff, and temperature, and the UV absorbance and humification degree of DOC had no obvious differences among months ( P<0.05). UV absorbance was applied to test the CDOC in Lower Dagu River using wave lengths of 254 and 280 nm. The results revealed that the annual DOC export flux varied from 1.6 to 3.76 × 105 g C/km2/yr in a complete hydrological year, significantly lower than the global average. It is worth mentioning that the DOC export flux was mainly concentrated in summer (˜90% of all-year flux in July and August), since the runoff in the Dagu River took place frequently in summer. These observations implied environment change could bring the temporal

Fido, a novel AMPylation domain common to fic, doc, and AvrB.

Directory of Open Access Journals (Sweden)

Lisa N Kinch

2009-06-01

Full Text Available The Vibrio parahaemolyticus type III secreted effector VopS contains a fic domain that covalently modifies Rho GTPase threonine with AMP to inhibit downstream signaling events in host cells. The VopS fic domain includes a conserved sequence motif (HPFx[D/E]GN[G/K]R that contributes to AMPylation. Fic domains are found in a variety of species, including bacteria, a few archaea, and metazoan eukaryotes.We show that the AMPylation activity extends to a eukaryotic fic domain in Drosophila melanogaster CG9523, and use sequence and structure based computational methods to identify related domains in doc toxins and the type III effector AvrB. The conserved sequence motif that contributes to AMPylation unites fic with doc. Although AvrB lacks this motif, its structure reveals a similar topology to the fic and doc folds. AvrB binds to a peptide fragment of its host virulence target in a similar manner as fic binds peptide substrate. AvrB also orients a phosphate group from a bound ADP ligand near the peptide-binding site and in a similar position as a bound fic phosphate.The demonstrated eukaryotic fic domain AMPylation activity suggests that the VopS effector has exploited a novel host posttranslational modification. Fic domain-related structures give insight to the AMPylation active site and to the VopS fic domain interaction with its host GTPase target. These results suggest that fic, doc, and AvrB stem from a common ancestor that has evolved to AMPylate protein substrates.

Heavy impurity confinement in hybrid operation scenario plasmas with a rotating 1/1 continuous mode

Science.gov (United States)

Raghunathan, M.; Graves, J. P.; Nicolas, T.; Cooper, W. A.; Garbet, X.; Pfefferlé, D.

2017-12-01

In future tokamaks like ITER with tungsten walls, it is imperative to control tungsten accumulation in the core of operational plasmas, especially since tungsten accumulation can lead to radiative collapse and disruption. We investigate the behavior of tungsten trace impurities in a JET-like hybrid scenario with both axisymmetric and saturated 1/1 ideal helical core in the presence of strong plasma rotation. For this purpose, we obtain the equilibria from VMEC and use VENUS-LEVIS, a guiding-center orbit-following code, to follow heavy impurity particles. In this work, VENUS-LEVIS has been modified to account for strong plasma flows with associated neoclassical effects arising from such flows. We find that the combination of helical core and plasma rotation augments the standard neoclassical inward pinch compared to axisymmetry, and leads to a strong inward pinch of impurities towards the magnetic axis despite the strong outward diffusion provided by the centrifugal force, as frequently observed in experiments.

Distinct expression of alkaline phosphatase activity in epilimnetic bacteria: Implication for persistent DOC consumption in a P-limited reservoir

Science.gov (United States)

Tseng, Y.; Kao, S.; Shiah, F.

2013-12-01

In a P-deficient system, P availability usually controls the microbial activity and thus the ecosystem function. Thingstad et al. (1997) first addressed a 'Malfunctioning Microbial-loop' theory, which stated that low bacterial production (BP) caused by insufficient nutrient supply would result in DOC accumulation in an oligotrophic ecosystem. In this study we re-examined the theory by conducting seasonal patterns and correlations among soluble reactive phosphate (SRP) and DOC, microbial abundances (picocyanobacteria, bacteria, and heterotrophic nanoflagellate; HNF) and activities (primary production, bacterial production, and alkaline phosphatase activity; APA) coupled with enzyme-labeled fluorescence (ELF) assays on bacterioplankton in a subtropical reservoir sharing the common features, nitrate-replete and P-deficient, with most natural freshwater system during Oct 2007-Oct 2008. Persistently high APA was recorded during most of time, implying that the system was P-deficient. Size fractionated APA and ELF assay revealed that bacteria were the major APA contributor. However, significantly low epilimnion DOC was recorded during the stratified summer season accompanying with high BP and APA as well as high PP, implying that heterotrophic bacteria can well sustain in P-deficient system by utilizing DOP to rapidly lower down DOC under relatively high PP. Such findings oppose the 'Malfunctioning Microbial-loop' theory. On the other hand, strong epilimnetic DOC accumulation occurred in Oct 2007 under low light and low PP condition accompanying with high abundance of HNF, implying that HNF grazing may contribute to a certain degree of DOC accumulation. Correlation matrix supported our suggestions. This study testified the DOC dynamics in P-deficient ecosystem are tightly coupled with the source (PP and grazing) and sink (BP). We also suggested that in SRP-limited freshwater systems bacteria are capable of breaking down autochthonous DOC to reduce the chance of DOC

Validation of SDM-Q-Doc Questionnaire to measure shared decision-making physician's perspective in oncology practice.

Science.gov (United States)

Calderon, C; Ferrando, P J; Carmona-Bayonas, A; Lorenzo-Seva, U; Jara, C; Beato, C; García, T; Ramchandani, A; Castelo, B; Muñoz, M M; Garcia, S; Higuera, O; Mangas-Izquierdo, M; Jimenez-Fonseca, P

2017-11-01

The aim of this study was to analyze the psychometric properties of the Shared Decision-Making Questionnaire-Physician version (SDM-Q-Doc) in a sample of medical oncologists who provide adjuvant treatment to patients with non-metastatic resected cancer and the correlations between the total SDM-Q-Doc score and physician satisfaction with the information provided. Prospective, observational and multicenter study in which 32 medical oncologists and 520 patients were recruited. The psychometric properties, dimensionality, and factor structure of the SDM-Q-Doc were assessed. Exploratory factor analyses suggested that the most likely solution was two-dimensional, with two correlated factors: one factor regarding information and another one about treatment. Confirmatory factor analysis based on cross-validation showed that the fitted two-dimensional solution provided the best fit to the data. Reliability analyses revealed good accuracy for the derived scores, both total and sub-scale, with estimates ranging from 0.81 to 0.89. The results revealed significant correlations between the total SDM-Q-Doc score and physician satisfaction with the information provided (p Doc showed good psychometric properties and could be a helpful tool that examines physician's perspective of SDM and as an indicator of quality and satisfaction in patients with cancer.

Suburban Soils: Are they the answer in determining factors controlling non-point-source DOC and DON in urban surface waters?

Science.gov (United States)

Aitkenhead-Peterson, J. A.

2016-12-01

Generally the quality of urban streams has been attributed to storm water runoff and sewage effluent discharge. Recent work in the upper Trinity Basin downstream from the Dallas/Fort Worth metropolis, TX concluded that sewage effluent only contributed between 1 and 35% of DOC dependent upon the population of the watershed. Change from native to urban land use increased DOC exports to between 938 - 1840 kg km-2 yr-1relative to the 517 kg km-2 yr-1 expected from native land use. Where this excess DOC might come from in an urban ecosystem was addressed in a separate study examining water extractable DOC (WEDOC) and DON (WEDON) in soils of single-family home lawns in Chicago, IL, Frederick, MD, Bryan/College Station, TX and Galveston, TX. These cities were exposed to different sources of sodium. Time of exposure to sodium was considered on the assumption that as new sub-divisions are built, new soil or turfgrass sod is introduced to the site. Exposure times were 0-5, 6-10, 11-20, 21-30 and > 30 yr. Length of exposure time of the soil to the urban environment was significant among the four cities examined for DOC (p < 0.001), DON (p < 0.001), sodium adsorption ratio (p < 0.006) but not for sodium (p = 0.08) or exchangeable sodium percent (ESP) (p = 0.09). In all cities WEDON increased with urban exposure time and in all cities except Galveston WEDOC increased with urban exposure time. Sodium, regardless of its source, explained 60% of the variance in WEDOC and 54% of the variance in WEDON across all cities (n = 136). To determine what other factors might be involved in increasing WEDOC and WEDON losses from suburban soils, backward stepwise regression models were used. Across the four cities, time of urban exposure, soil saturated hydraulic conductivity (Ksat), NO3-N, NH4-N, S, PO4-P, Na, Cu, Ca, Fe and Zn produced a significant model for WEDOC (Adjusted r2 = 0.85; p < 0.001) and Ksat, pH, NH4-N, PO4-P, S, Alkalinity and Cu produced a significant model for WEDON

Cross-regional prediction of long-term trajectory of stream water DOC response to climate change

Science.gov (United States)

H. Laudon; J.M. Buttle; S.K. Carey; J.J. McDonnell; K.J. McGuire; J. Seibert; J. Shanley; C. Soulsby; D. Tetzlaff

2012-01-01

There is no scientific consensus about how dissolved organic carbon (DOC) in surface waters is regulated. Here we combine recent literature data from 49 catchments with detailed stream and catchment process information from nine well established research catchments at mid- to high latitudes to examine the question of how climate controls stream water DOC. We show for...

Resuspension of polychlorinated biphenyl-contaminated field sediment: release to the water column and determination of site-specific K DOC.

Science.gov (United States)

Friedman, Carey L; Lohmann, Rainer; Burgess, Robert M; Perron, Monique M; Cantwell, Mark G

2011-02-01

Sediments from the New Bedford Harbor (NBH) U.S. Environmental Protection Agency (U.S. EPA) Superfund site (Massachusetts, USA), contaminated with polychlorinated biphenyls (PCBs), were resuspended under different water column redox conditions: untreated, oxidative, and reductive. The partitioning of PCBs to the overlying water column was measured with polyethylene samplers and compared to partitioning without resuspension. Greater concentrations of total aqueous (freely dissolved + dissolved organic carbon (DOC)-associated) PCBs were found in all resuspended treatments for PCBs with mid-range K(OW)s, but no difference was observed in total aqueous concentrations among different redox conditions. The magnitude of increased concentrations depended on resuspension time and congener K(OW), but ranged from approximately one to eight times those found without resuspension. In a parallel study, DOC was flocculated and removed from smaller-scale NBH sediment resuspensions. In situ K(DOC)s were determined and used to calculate freely dissolved and DOC-associated fractions of the increase in total aqueous PCB concentrations due to resuspension. The importance of DOC-associated PCBs increased with increasing K(OW). In situ K(DOC)s were approximately one to two orders of magnitude greater than those calculated with a commonly used linear free energy relationship (LFER). The present study demonstrates that resuspension of contaminated sediments releases PCBs to the water column, of which a significant fraction are DOC-associated (e.g., 28, 65, and 90% for PCBs 28, 66, and 110, respectively). Results also imply that site-specific PCB K(DOC)s are superior to those calculated with generic LFERs. © 2010 SETAC.

Long-term environmental drivers of DOC fluxes: Linkages between management, hydrology and climate in a subtropical coastal estuary

Science.gov (United States)

Regier, Peter; Briceño, Henry; Jaffé, Rudolf

2016-12-01

Urban and agricultural development of the South Florida peninsula has disrupted historic freshwater flow in the Everglades, a hydrologically connected ecosystem stretching from central Florida to the Gulf of Mexico, USA. Current system-scale restoration efforts aim to restore natural hydrologic regimes to reestablish pre-drainage ecosystem functioning through increased water availability, quality and timing. Aquatic transport of carbon in this ecosystem, primarily as dissolved organic carbon (DOC), plays a critical role in biogeochemical cycling and food-web dynamics, and will be affected both by water management policies and climate change. To better understand DOC dynamics in South Florida estuaries and how hydrology, climate and water management may affect them, 14 years of monthly data collected in the Shark River estuary were used to examine DOC flux dynamics in a broader environmental context. Multivariate statistical methods were applied to long-term datasets for hydrology, water quality and climate to untangle the interconnected environmental drivers that control DOC export at monthly and annual scales. DOC fluxes were determined to be primarily controlled by hydrology but also by seasonality and long-term climate patterns and episodic weather events. A four-component model (salinity, rainfall, inflow, Atlantic Multidecadal Oscillation) capable of predicting DOC fluxes (R2 = 0.84, p water management and salinity.

Mineralocorticoid hypertension and hypokalaemia induced by posaconazole.

Science.gov (United States)

Boughton, Charlotte; Taylor, David; Ghataore, Lea; Taylor, Norman; Whitelaw, Benjamin C

2018-01-01

We describe severe hypokalaemia and hypertension due to a mineralocorticoid effect in a patient with myelodysplastic syndrome taking posaconazole as antifungal prophylaxis. Two distinct mechanisms due to posaconazole are identified: inhibition of 11β hydroxylase leading to the accumulation of the mineralocorticoid hormone 11-deoxycorticosterone (DOC) and secondly, inhibition of 11β hydroxysteroid dehydrogenase type 2 (11βHSD2), as demonstrated by an elevated serum cortisol-to-cortisone ratio. The effects were ameliorated by spironolactone. We also suggest that posaconazole may cause cortisol insufficiency. Patients taking posaconazole should therefore be monitored for hypokalaemia, hypertension and symptoms of hypocortisolaemia, at the onset of treatment and on a monthly basis. Treatment with mineralocorticoid antagonists (spironolactone or eplerenone), supplementation of glucocorticoids (e.g. hydrocortisone) or dose reduction or cessation of posaconazole should all be considered as management strategies. Combined hypertension and hypokalaemia are suggestive of mineralocorticoid excess; further investigation is appropriate.If serum aldosterone is suppressed, then further investigation to assess for an alternative mineralocorticoid is appropriate, potentially using urine steroid profiling and/or serum steroid panelling.Posaconazole can cause both hypokalaemia and hypertension, and we propose that this is due to two mechanisms - both 11β hydroxylase inhibition and 11β HSD2 inhibition.Posaconazole treatment may lead to cortisol insufficiency, which may require treatment; however, in this clinical case, the effect was mild.First-line treatment of this presentation would likely be use of a mineralocorticoid antagonist.Patients taking posaconazole should be monitored for hypertension and hypokalaemia on initiation and monthly thereafter.

Dynamics of dissolved organic carbon (DOC) through stormwater basins designed for groundwater recharge in urban area: Assessment of retention efficiency.

Science.gov (United States)

Mermillod-Blondin, Florian; Simon, Laurent; Maazouzi, Chafik; Foulquier, Arnaud; Delolme, Cécile; Marmonier, Pierre

2015-09-15

Managed aquifer recharge (MAR) has been developed in many countries to limit the risk of urban flooding and compensate for reduced groundwater recharge in urban areas. The environmental performances of MAR systems like infiltration basins depend on the efficiency of soil and vadose zone to retain stormwater-derived contaminants. However, these performances need to be finely evaluated for stormwater-derived dissolved organic matter (DOM) that can affect groundwater quality. Therefore, this study examined the performance of MAR systems to process DOM during its transfer from infiltration basins to an urban aquifer. DOM characteristics (fluorescent spectroscopic properties, biodegradable and refractory fractions of dissolved organic carbon -DOC-, consumption by micro-organisms during incubation in slow filtration sediment columns) were measured in stormwater during its transfer through three infiltration basins during a stormwater event. DOC concentrations sharply decreased from surface to the aquifer for the three MAR sites. This pattern was largely due to the retention of biodegradable DOC which was more than 75% for the three MAR sites, whereas the retention of refractory DOC was more variable and globally less important (from 18% to 61% depending on MAR site). Slow filtration column experiments also showed that DOC retention during stormwater infiltration through soil and vadose zone was mainly due to aerobic microbial consumption of the biodegradable fraction of DOC. In parallel, measurements of DOM characteristics from groundwaters influenced or not by MAR demonstrated that stormwater infiltration increased DOC quantity without affecting its quality (% of biodegradable DOC and relative aromatic carbon content -estimated by SUVA254-). The present study demonstrated that processes occurring in soil and vadose zone of MAR sites were enough efficient to limit DOC fluxes to the aquifer. Nevertheless, the enrichments of DOC concentrations measured in groundwater below

Master function for the solid:solution equilibrium of DOC in taiga and tundra soils of N. Russia: experimental and modeling results

Science.gov (United States)

Oosterwoud, M. R.; van der Zee, S. E. A. T. M.; Meeussen, J. C. L.; Temminghoff, E. J. M.

2012-04-01

The formation and degradation of Dissolved Organic Carbon (DOC) in arctic environments is intensively investigated, in the context of DOC loading of arctic rivers and seas as well as climate change. However, chemical interaction studies are more scarce, in particular those involving modeling. We investigated DOC interactions in N. Russian taiga and tundra soils, and found that water extractable organic carbon (WEOC) comprises only a small fraction of total organic carbon, whereas DOC is again a small fraction of WEOC. The chemical composition of DOC in terms of humic, fulvic, and hydrophilic acids, the concentrations of dominant cations such as Ca and Al, and the solid iron oxide contents appear to differ profoundly for different soil horizons, as well as between taiga and tundra soils. To reconcile these differences, we processed the data with a simple Freundlich model and with advanced LCD (Ligand and Charge Distribution) modeling of DOC interactions. In the LCD modeling, a combination is made of advances such as CD-MUSIC, and Nica-Donnan approaches, that are implemented in the software ORCHESTRA (though adjusted for computational stability by us). To avoid fitting without good foundation, use is made of the generic parameterization of LCD in combination with measured, site-specific chemical data such as concentrations. We observe that the soil samples from both regions, soil types and horizons can be described with a single DOC sorption Freundlich isotherm. More interestingly, for the same set of samples, the LCD modeling enables us to cast DOC sorption into a single Master Function, that takes iron oxide content and Al and Ca concentrations of soil samples into account in a purely predictive way. Based on this Master Function, it is feasible to assess how DOC is sorbed onto the solid surface. In combination with DOC production and degradation models, our results provide a more balanced instrument to address changes in DOC loading to surface waters due to

Solar ultraviolet photodegradation of DOC may stimulate freshwater food webs

NARCIS (Netherlands)

Lange, de H.J.; Morris, D.P.; Williamson, C.E.

2003-01-01

The UV component in solar radiation increased the availability of DOC for bacterial growth, and led to an increase in bacterial and bacterivore abundance in laboratory plankton cultures. UV radiation may thus stimulate ecosystem productivity by increasing dissolved organic carbon lability and

Effects of ozone as a stand-alone and coagulation-aid treatment on the reduction of trihalomethanes precursors from high DOC and hardness water.

Science.gov (United States)

Sadrnourmohamadi, Mehrnaz; Gorczyca, Beata

2015-04-15

This study investigates the effect of ozone as a stand-alone and coagulation aid on the removal of dissolved organic carbon (DOC) from the water with a high level of DOC (13.8 mgL(-1)) and calcium hardness (270 mgL(-1)) CaCO3. Natural water collected from the Assiniboine River (Manitoba, Canada) was used in this study. Effectiveness of ozone treatment was evaluated by measurement of DOC, DOC fractions, UV254, and trihalomethane formation potential (THMFP). Additionally, zeta potential and dissolved calcium concentration were measured to discern the mechanism of ozone reactions. Results indicated that 0.8 mg O3/mg DOC ozone stand-alone can cause up to 86% UV254 reduction and up to 27% DOC reduction. DOC fractionation results showed that ozone can change the composition of DOC in the water samples, converting the hydrophobic fractions into hydrophilic ones and resulting in the reduction of THMFP. Also, ozone caused a decrease in particle stability and dissolved calcium concentration. These simultaneous ozonation effects caused improved water flocculation and enhanced removal of DOC. This resulted in reduction of the coagulant dosage when ozone doses higher than 0.2 mg O3/mg DOC were applied prior to coagulation with ferric sulfate. Also, pre-ozonation-coagulation process achieved preferential THMFP removal for all of the ozone doses tested (0-0.8 mg O3/mg DOC), leading to a lower specific THMFP in pre-ozonated-coagulated waters than in the corresponding ozonated waters. Copyright © 2015 Elsevier Ltd. All rights reserved.

ICF-DOC: the ICF dedicated checklist for evaluating functioning and disability in people with disorders of consciousness.

Science.gov (United States)

Leonardi, Matilde; Covelli, Venusia; Giovannetti, Ambra M; Raggi, Alberto; Sattin, Davide

2014-09-01

Clinicians need a comprehensive description of patients' functioning state to capture the complex interaction between symptoms and environmental factors, and to determine the actual level of functioning in patients in a vegetative state or a minimally conscious state. The aim of this study is to develop an International Classification of Functioning, Disability, and Health (ICF) checklist for patients with disorders of consciousness (DOC) so as to capture and describe, with a tailored list of categories, the most common health, disability, and functioning issues of adult patients with DOC. The WHO ICF checklist was used as a basis for collecting data. This was an observational, cross-sectional, multicenter study conducted in 69 Italian centers. Specific methodological procedures were used to identify the most appropriate categories for DOC patients to be added to or deleted from the ICF checklist so as to develop the ICF-DOC checklist. A total of 566 adult patients were enrolled: 398 in a vegetative state and 168 in a minimally conscious state. A total of 127 ICF categories reached the threshold of 20% concerning the presence of a problem: 37 categories from the body functions chapter, 13 from the body structures chapter, 46 from the activities and participations chapter, and 31 from the environmental factors chapter. ICF categories identified in this study can be useful guidelines for clinicians and researchers to collect data on functioning and disability of adult patients with DOC. The new ICF-DOC checklist allows monitoring of the effects of interventions on functional areas and possible changes in each patient in follow-up studies.

Speciation of Se and DOC in soil solution and their relation to Se bioavailability.

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Weng, Liping; Vega, Flora Alonso; Supriatin, Supriatin; Bussink, Wim; Van Riemsdijk, Willem H

2011-01-01

A 0.01 M CaCl(2) extraction is often used to asses the bioavailability of plant nutrients in soils. However, almost no correlation was found between selenium (Se) in the soil extraction and Se content in grass. The recently developed anion Donnan membrane technique was used to analyze chemical speciation of Se in the 0.01 M CaCl(2) extractions of grassland soils and fractionation of DOC (dissolved organic carbon). The results show that most of Se (67-86%) in the extractions (15 samples) are colloidal-sized Se. Only 13-34% of extractable Se are selenate, selenite and small organic Se (<1 nm). Colloidal Se is, most likely, Se bound to or incorporated in colloidal-sized organic matter. The dominant form of small Se compounds (selenate, selenite/small organic compounds) depends on soil. A total of 47-85% of DOC is colloidal-sized and 15-53% are small organic molecules (<1 nm). In combination with soluble S (sulfur) and/or P (phosphor), concentration of small DOC can explain most of the variability of Se content in grass. The results indicate that mineralization of organic Se is the most important factor that controls Se availability in soils. Competition with sulfate and phosphate needs to be taken into account. Further research is needed to verify if concentration of small DOC is a good indicator of mineralization of soil organic matter.

Adsorption and bioadsorption of granular activated carbon (GAC) for dissolved organic carbon (DOC) removal in wastewater.

Science.gov (United States)

Xing, W; Ngo, H H; Kim, S H; Guo, W S; Hagare, P

2008-12-01

In this study, the performances of GAC adsorption and GAC bioadsorption in terms of dissolved organic carbon (DOC) removal were investigated with synthetic biologically treated sewage effluent (BTSE), synthetic primary treated sewage effluent (PTSE), real BTSE and real PTSE. The main aims of this study are to verify and compare the efficiency of DOC removal by GAC (adsorption) and acclimatized GAC (bioadsorption). The results indicated that the performance of bioadsorption was significantly better than that of adsorption in all cases, showing the practical use of biological granular activated carbon (BGAC) in filtration process. The most significance was observed at a real PTSE with a GAC dose of 5g/L, having 54% and 96% of DOC removal by adsorption and bioadsorption, respectively. In addition, it was found that GAC adsorption equilibrium was successfully predicted by a hybrid Langmuir-Freundlich model whilst integrated linear driving force approximation (LDFA)+hybrid isotherm model could describe well the adsorption kinetics. Both adsorption isotherm and kinetic coefficients determined by these models will be useful to model the adsorption/bioadsorption process in DOC removal of BGAC filtration system.

Using Project-Based Learning and Google Docs to Support Diversity

Science.gov (United States)

Leh, Amy

2014-01-01

A graduate course, ETEC543 ("Technology and Learning I"), was revised to better serve increasing new student population, international students, in an academic program. Project-based learning, Google Docs, and instructional strategies fostering diversity and critical thinking were incorporated into the course redesign. Observations,…

Overexpression of a maize plasma membrane intrinsic protein ZmPIP1;1 confers drought and salt tolerance in Arabidopsis.

Science.gov (United States)

Zhou, Lian; Zhou, Jing; Xiong, Yuhan; Liu, Chaoxian; Wang, Jiuguang; Wang, Guoqiang; Cai, Yilin

2018-01-01

Drought and salt stress are major abiotic stress that inhibit plants growth and development, here we report a plasma membrane intrinsic protein ZmPIP1;1 from maize and identified its function in drought and salt tolerance in Arabidopsis. ZmPIP1;1 was localized to the plasma membrane and endoplasmic reticulum in maize protoplasts. Treatment with PEG or NaCl resulted in induced expression of ZmPIP1;1 in root and leaves. Constitutive overexpression of ZmPIP1;1 in transgenic Arabidopsis plants resulted in enhanced drought and salt stress tolerance compared to wild type. A number of stress responsive genes involved in cellular osmoprotection in ZmPIP1;1 overexpression plants were up-regulated under drought or salt condition. ZmPIP1;1 overexpression plants showed higher activities of reactive oxygen species (ROS) scavenging enzymes such as catalase and superoxide dismutase, lower contents of stress-induced ROS such as superoxide, hydrogen peroxide and malondialdehyde, and higher levels of proline under drought and salt stress than did wild type. ZmPIP1;1 may play a role in drought and salt stress tolerance by inducing of stress responsive genes and increasing of ROS scavenging enzymes activities, and could provide a valuable gene for further plant breeding.

A systematic examination of the relationships between CDOM and DOC in inland waters in China

OpenAIRE

K. Song; Y. Zhao; Y. Zhao; Z. Wen; C. Fang; C. Fang; Y. Shang

2017-01-01

Chromophoric dissolved organic matter (CDOM) plays a vital role in the biogeochemical cycle in aquatic ecosystems. The relationship between CDOM and dissolved organic carbon (DOC) has been investigated, and this significant relationship lays the foundation for the estimation of DOC using remotely sensed imagery data. The current study examined samples from freshwater lakes, saline lakes, rivers and streams, urban water bodies, and ice-covered lakes in China for tracking t...

An evaluation of organic substance fraction removal during ion exchange with Miex-DOC resin.

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Wolska, Małgorzata

2015-07-01

In this study, the usefulness of Miex-DOC resin in eliminating organic substances and their fractions from water sources for drinking water was evaluated. The objects of study were samples from three surface water sources and one infiltration water source taken at water treatment plants before treatment in technical conditions. In particular, the effectiveness of removing biodegradable and non-biodegradable fractions as a function of resin dosages and water-resin contact times was evaluated. The ion exchange process with the Miex-DOC resin achieved a high effectiveness in removing aromatic non-biodegradable organic substances, and therefore a reduction in UV254 absorbance. The biodegradable fraction is much less susceptible to removal yet its removal effectiveness allows for a significant reduction in hazards connected with secondary microorganism development. The results of this study indicate the possibility of using ion exchange with the Miex-DOC resin for effective removal of disinfection by-product precursors.

Deconstructing the Effects of Flow on DOC, Nitrate, and Major Ion Interactions Using a High-Frequency Aquatic Sensor Network

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Koenig, L. E.; Shattuck, M. D.; Snyder, L. E.; Potter, J. D.; McDowell, W. H.

2017-12-01

Streams provide a physical linkage between land and downstream river networks, delivering solutes derived from multiple catchment sources. We analyzed high-frequency time series of stream solutes to characterize the timing and magnitude of major ion, nutrient, and organic matter transport over event, seasonal, and annual timescales as well as to assess whether nitrate (NO3-) and dissolved organic carbon (DOC) transport are coupled in catchments, which would be expected if they are subject to similar biogeochemical controls throughout the watershed. Our data set includes in situ observations of NO3-, fluorescent dissolved organic matter (DOC proxy), and specific conductance spanning 2-4 years in 10 streams and rivers across New Hampshire, including observations of nearly 700 individual hydrologic events. We found a positive response of NO3- and DOC to flow in forested streams, but watershed development led to a negative relationship between NO3- and discharge, and thus a decoupling of the overall NO3- and DOC responses to flow. On event and seasonal timescales, NO3- and DOC consistently displayed different behaviors. For example, in several streams, FDOM yield was greatest during summer storms while NO3- yield was greatest during winter storms. Most streams had generalizable storm NO3- and DOC responses, but differences in the timing of NO3- and DOC transport suggest different catchment sources. Further, certain events, including rain-on-snow and summer storms following dry antecedent conditions, yielded disproportionate NO3- responses. High-frequency data allow for increased understanding of the processes controlling solute variability and will help reveal their responses to changing climatic regimes.

Assessment of testicular corticosterone biosynthesis in adult male rats.

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Naoyuki Maeda

Full Text Available Corticosterone is synthesized in the adrenal glands and is circulated throughout the body to perform regulatory functions in various tissues. The testis is known to synthesize and secrete testosterone and other androgens. We developed an accurate method to measure steroid content using liquid chromatography-mass spectrometry analysis. In the present study, significant levels of the precursor compounds of testosterone and corticosterone synthesis could be detected in rat testis using this method. After adrenalectomy, corticosterone remained in the blood and testicular tissue at approximately 1% of the amount present in the control testis. When the excised testicular tissue was washed and incubated with NADH, NADPH and progesterone, not only testosterone and its precursors but also 11-deoxycorticosterone and corticosterone were produced; the levels of 11-deoxycorticosterone and corticosterone increased with incubation time. The production rate of 11-deoxycorticosterone from progesterone was estimated to be approximately 1/20 that of 17-hydroxyprogesterone, and the corticosterone level was approximately 1/10 that of testosterone. These ratios coincided with those in the testicular tissue of the adrenalectomized rats, indicating that corticosterone was synthesized in the testis and not in the blood. A primary finding of this study was that corticosterone and testosterone were synthesized in a 1/10-20 ratio in the testis. It is concluded that corticosterone, which has various functions, such as the regulation of glycolysis and mediating spermatogenesis, is produced locally in the testis and that this the local production is convenient and functional to respond to local needs.

Estimation of boswellic acids from market formulations of Boswellia serrata extract and 11-keto beta-boswellic acid in human plasma by high-performance thin-layer chromatography.

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Shah, Shailesh A; Rathod, Ishwarsinh S; Suhagia, Bhanubhai N; Patel, Dharmesh A; Parmar, Vijay K; Shah, Bharat K; Vaishnavi, Vikas M

2007-04-01

A rapid and sensitive high-performance thin-layer chromatographic (HPTLC) method was developed and validated for the quantitative estimation of boswellic acids in formulation containing Boswellia serrata extract (BSE) and 11-keto beta-boswellic acid in human plasma. Simple extraction method was used for isolation of boswellic acid from formulation sample and acidified plasma sample. The isolated samples were chromatographed on silica gel 60F(254)-TLC plates, developed using ternary-solvent system (hexane-chloroform-methanol, 5:5:0.5, v/v) and scanned at 260 nm. The linearity range for 11-KBA spiked in 1 ml of plasma was 29.15-145.75 ng with average recovery of 91.66%. The limit of detection and limit of quantification for 11-KBA in human plasma were found to be 8.75 ng/ml and 29.15 ng/ml. The developed method was successfully applied for the assay of market formulations containing BSE and to determine plasma level of 11-keto beta-boswellic acid in a clinical pilot study.

Direct DOC and nitrate determination in water using dual pathlength and second derivative UV spectrophotometry.

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Causse, Jean; Thomas, Olivier; Jung, Aude-Valérie; Thomas, Marie-Florence

2017-01-01

UV spectrophotometry is largely used for water and wastewater quality monitoring. The measurement/estimation of specific and aggregate parameters such as nitrate and dissolved organic carbon (DOC) is possible with UV spectra exploitation, from 2 to multi wavelengths calibration. However, if nitrate determination from UV absorbance is known, major optical interferences linked to the presence of suspended solids, colloids or dissolved organic matter limit the relevance of UV measurement for DOC assessment. A new method based on UV spectrophotometric measurement of raw samples (without filtration) coupling a dual pathlength for spectra acquisition and the second derivative exploitation of the signal is proposed in this work. The determination of nitrate concentration is carried out from the second derivative of the absorbance at 226 nm corresponding at the inflexion point of nitrate signal decrease. A short optical pathlength can be used considering the strong absorption of nitrate ion around 210 nm. For DOC concentration determination the second derivative absorbance at 295 nm is proposed after nitrate correction. Organic matter absorbing slightly in the 270-330 nm window, a long optical pathlength must be selected in order to increase the sensitivity. The method was tested on several hundred of samples from small rivers of two agricultural watersheds located in Brittany, France, taken during dry and wet periods. The comparison between the proposed method and the standardised procedures for nitrate and DOC measurement gave a good adjustment for both parameters for ranges of 2-100 mg/L NO3 and 1-30 mg/L DOC. Copyright © 2016 Elsevier Ltd. All rights reserved.

Land management as a factor controlling dissolved organic carbon release from upland peat soils 2: changes in DOC productivity over four decades.

Science.gov (United States)

Clutterbuck, B; Yallop, A R

2010-11-15

Increasing DOC concentrations in surface waters have been observed across parts of Europe and North America over the past few decades. Most proposed explanations for these widespread trends invoke climate change or reductions in sulphate deposition. However, these factors do not seem apposite to explain either the fine-scale (within kilometres) or regional-scale spatial variation in DOC concentrations observed across the UK. We have reconstructed DOC concentrations and land use for one North Pennine and five South Pennine catchments (UK), located in three discrete areas, over the last four decades. Rainfall, temperature and sulphate deposition data, where available, were also collated and the potential influence of these factors on surface water DOC concentrations was assessed. Four of the six catchments examined showed highly significant (pDOC (hDOC) concentrations in drainage waters over the period 1990-2005. Changes in temperature and sulphate deposition may explain 20-30% of this trend in these four catchments. However, the rapid expansion of new moorland burn on blanket peat can explain a far greater degree (>80%) of the change in hDOC. Far smaller increases in hDOC (10-18%) were identified for the two remaining catchments. These two sites experienced similar changes in sulphur deposition and temperature to those that had seen largest increases in DOC, but contained little or no moorland burn management on blanket peat. This study shows that regional-scale factors undoubtedly underlie some of the recent observed increases in drainage humic coloured DOC. However, changes in land management, in this case the extensive use of fire management on blanket peat, are a far more important driver of increased hDOC release from upland catchments in some parts of the UK. It suggests that the recent rapid increase in the use of burning on blanket peat moorland has implications for ecosystem services and carbon budgets. Copyright © 2010 Elsevier B.V. All rights reserved.

The "DOC" screen: Feasible and valid screening for depression, Obstructive Sleep Apnea (OSA) and cognitive impairment in stroke prevention clinics.

Science.gov (United States)

Swartz, Richard H; Cayley, Megan L; Lanctôt, Krista L; Murray, Brian J; Cohen, Ashley; Thorpe, Kevin E; Sicard, Michelle N; Lien, Karen; Sahlas, Demetrios J; Herrmann, Nathan

2017-01-01

Post-stroke Depression, Obstructive sleep apnea (OSA) and Cognitive impairment ("DOC") are associated with greater mortality, worse recovery and poorer quality of life. Best practice recommendations endorse routine screening for each condition; yet, all are under-assessed, diagnosed and treated. We seek to determine the feasibility and validity of an integrated tool ("DOC" screen) to identify stroke clinic patients at high-risk of depression, OSA, and cognitive impairment. All consecutive new referrals to a regional Stroke Prevention Clinic who were English-speaking and non-aphasic were eligible to be screened. Time for screen completion was logged. DOC screen results were compared to the neuropsychological battery and polysomnogram assessments using a modified receiver operator characteristic and area under the curve analysis. Data is reported to conform to STARD guidelines. 1503 people were screened over 2 years. 89% of eligible patients completed the screen in 5 minutes or less (mean 4.2 minutes), less than half the time it takes to complete the Montreal Cognitive Assessment (MoCA). 437 people consented to detailed testing. Of those, 421 completed the Structured Clinical Interview for Depression within 3 months of screening, 387 completed detailed neuropsychological testing within 3 months, and 88 had overnight polysomnograms. Screening scores combined with demographic variables (age, sex, education, body mass index), had excellent validity compared to gold standard diagnoses: DOC-Mood AUC 0.90; DOC-Apnea AUC 0.80; DOC-Cog AUC 0.81. DOC screen scores can reliably categorize patients in to low-, intermediate- or high-risk groups for further action and can do so with comparable accuracy to more time-consuming screens. Systematic screening of depression, obstructive sleep apnea, and cognitive impairment in 5 minutes or less is feasible and valid in a high volume stroke clinic using the DOC screen. The DOC screen may facilitate improved identification and treatment

Abundance, stable isotopic composition, and export fluxes of DOC, POC, and DIC from the Lower Mississippi River during 2006–2008

Science.gov (United States)

Cai, Yihua; Guo, Laodong; Wang, Xuri; Aiken, George R.

2015-01-01

Sources, abundance, isotopic compositions, and export fluxes of dissolved inorganic carbon (DIC), dissolved and colloidal organic carbon (DOC and COC), and particulate organic carbon (POC), and their response to hydrologic regimes were examined through monthly sampling from the Lower Mississippi River during 2006–2008. DIC was the most abundant carbon species, followed by POC and DOC. Concentration and δ13C of DIC decreased with increasing river discharge, while those of DOC remained fairly stable. COC comprised 61 ± 3% of the bulk DOC with similar δ13C abundances but higher percentages of hydrophobic organic acids than DOC, suggesting its aromatic and diagenetically younger status. POC showed peak concentrations during medium flooding events and at the rising limb of large flooding events. While δ13C-POC increased, δ15N of particulate nitrogen decreased with increasing discharge. Overall, the differences in δ13C between DOC or DIC and POC show an inverse correlation with river discharge. The higher input of soil organic matter and respired CO2 during wet seasons was likely the main driver for the convergence of δ13C between DIC and DOC or POC, whereas enhanced in situ primary production and respiration during dry seasons might be responsible for their isotopic divergence. Carbon export fluxes from the Mississippi River were estimated to be 13.6 Tg C yr−1 for DIC, 1.88 Tg C yr−1 for DOC, and 2.30 Tg C yr−1 for POC during 2006–2008. The discharge-normalized DIC yield decreased during wet seasons, while those of POC and DOC increased and remained constant, respectively, implying variable responses in carbon export to the increasing discharge.

The first insight into the metabolite profiling of grapes from three Vitis vinifera L. cultivars of two controlled appellation (DOC) regions.

Science.gov (United States)

Teixeira, António; Martins, Viviana; Noronha, Henrique; Eiras-Dias, José; Gerós, Hernâni

2014-03-10

The characterization of the metabolites accumulated in the grapes of specific cultivars grown in different climates is of particular importance for viticulturists and enologists. In the present study, the metabolite profiling of grapes from the cultivars, Alvarinho, Arinto and Padeiro de Basto, of two Portuguese Controlled Denomination of Origin (DOC) regions (Vinho Verde and Lisboa) was investigated by gas chromatography-coupled time-of-flight mass spectrometry (GC-TOF-MS) and an amino acid analyzer. Primary metabolites, including sugars, organic acids and amino acids, and some secondary metabolites were identified. Tartaric and malic acids and free amino acids accumulated more in grapes from vines of the DOC region of Vinho Verde than DOC Lisboa, but a principal component analysis (PCA) plot showed that besides the DOC region, the grape cultivar also accounted for the variance in the relative abundance of metabolites. Grapes from the cultivar, Alvarinho, were particularly rich in malic acid and tartaric acids in both DOC regions, but sucrose accumulated more in the DOC region of Vinho Verde.

The First Insight into the Metabolite Profiling of Grapes from Three Vitis vinifera L. Cultivars of Two Controlled Appellation (DOC Regions

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António Teixeira

2014-03-01

Full Text Available The characterization of the metabolites accumulated in the grapes of specific cultivars grown in different climates is of particular importance for viticulturists and enologists. In the present study, the metabolite profiling of grapes from the cultivars, Alvarinho, Arinto and Padeiro de Basto, of two Portuguese Controlled Denomination of Origin (DOC regions (Vinho Verde and Lisboa was investigated by gas chromatography-coupled time-of-flight mass spectrometry (GC-TOF-MS and an amino acid analyzer. Primary metabolites, including sugars, organic acids and amino acids, and some secondary metabolites were identified. Tartaric and malic acids and free amino acids accumulated more in grapes from vines of the DOC region of Vinho Verde than DOC Lisboa, but a principal component analysis (PCA plot showed that besides the DOC region, the grape cultivar also accounted for the variance in the relative abundance of metabolites. Grapes from the cultivar, Alvarinho, were particularly rich in malic acid and tartaric acids in both DOC regions, but sucrose accumulated more in the DOC region of Vinho Verde.

Simultaneous determination of phenytoin, carbamazepine, and 10,11-carbamazepine epoxide in human plasma by high-performance liquid chromatography with ultraviolet detection.

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Bhatti, M M; Hanson, G D; Schultz, L

1998-03-01

The Bioanalytical Chemistry Department at the Madison facility of Covance Laboratories, has developed and validated a simple and sensitive method for the simultaneous determination of phenytoin (PHT), carbamazepine (CBZ) and 10,11-carbamazepine epoxide (CBZ-E) in human plasma by high-performance liquid chromatography with 10,11 dihydrocarbamazepine as the internal standard. Acetonitrile was added to plasma samples containing PHT, CBZ and CBZ-E to precipitate the plasma proteins. After centrifugation, the acetonitrile supernatant was transferred to a clean tube and evaporated under N2. The dried sample extract was reconstituted in 0.4 ml of mobile phase and injected for analysis by high-performance liquid chromatography. Separation was achieved on a Spherisorb ODS2 analytical column with a mobile phase of 18:18:70 acetonitrile:methanol:potassium phosphate buffer. Detection was at 210 nm using an ultraviolet detector. The mean retention times of CBZ-E, PHT and CBZ were 5.8, 9.9 and 11.8 min, respectively. Peak height ratios were fit to a least squares linear regression algorithm with a 1/(concentration)2 weighting. The method produces acceptable linearity, precision and accuracy to a minimum concentration of 0.050 micrograms ml-1 in human plasma. It is also simple and convenient, with no observable matrix interferences.

Mapping Surface Water DOC in the Northern Gulf of Mexico Using CDOM Absorption Coefficients and Remote Sensing Imagery

Science.gov (United States)

Kelly, B.; Chelsky, A.; Bulygina, E.; Roberts, B. J.

2017-12-01

Remote sensing techniques have become valuable tools to researchers, providing the capability to measure and visualize important parameters without the need for time or resource intensive sampling trips. Relationships between dissolved organic carbon (DOC), colored dissolved organic matter (CDOM) and spectral data have been used to remotely sense DOC concentrations in riverine systems, however, this approach has not been applied to the northern Gulf of Mexico (GoM) and needs to be tested to determine how accurate these relationships are in riverine-dominated shelf systems. In April, July, and October 2017 we sampled surface water from 80+ sites over an area of 100,000 km2 along the Louisiana-Texas shelf in the northern GoM. DOC concentrations were measured on filtered water samples using a Shimadzu TOC-VCSH analyzer using standard techniques. Additionally, DOC concentrations were estimated from CDOM absorption coefficients of filtered water samples on a UV-Vis spectrophotometer using a modification of the methods of Fichot and Benner (2011). These values were regressed against Landsat visible band spectral data for those same locations to establish a relationship between the spectral data, CDOM absorption coefficients. This allowed us to spatially map CDOM absorption coefficients in the Gulf of Mexico using the Landsat spectral data in GIS. We then used a multiple linear regressions model to derive DOC concentrations from the CDOM absorption coefficients and applied those to our map. This study provides an evaluation of the viability of scaling up CDOM absorption coefficient and remote-sensing derived estimates of DOC concentrations to the scale of the LA-TX shelf ecosystem.

Determination of dissolved inorganic carbon (DIC) and dissolved organic carbon (DOC) in freshwaters by sequential injection spectrophotometry with on-line UV photo-oxidation

International Nuclear Information System (INIS)

Tue-Ngeun, Orawan; Sandford, Richard C.; Jakmunee, Jaroon; Grudpan, Kate; McKelvie, Ian D.; Worsfold, Paul J.

2005-01-01

An automated sequential injection (SI) method for the determination of dissolved inorganic carbon (DIC) and dissolved organic carbon (DOC) in freshwaters is presented. For DIC measurement on-line sample acidification (sulphuric acid, pH 2 which subsequently diffused through a PTFE membrane into a basic, cresol red acceptor stream. The CO 2 increased the concentration of the acidic form of the cresol red indicator, with a resultant decrease in absorbance at 570 nm being directly proportional to DIC concentration. DIC + DOC was determined after on-line sample irradiation (15 W low power UV lamp) coupled with acid-peroxydisulfate digestion, with the subsequent detection of CO 2 as described above. DOC was determined by subtraction of DIC from (DIC + DOC). Analytical figures of merit were linear ranges of 0.05-5.0 mg C L -1 for both DIC and DIC + DOC, with typical R.S.D.s of less than 7% (0.05 mg C L -1 -5.3% for DIC and 6.6% for DIC + DOC; 4.0 mg C L -1 -2.6% for DIC and 2.4% for DIC + DOC, n = 3) and an LOD (blank + 3S.D.) of 0.05 mg C L -1 . Sample throughput for the automated system was 8 h -1 for DIC and DOC with low reagent consumption (acid/peroxydisulfate 200 μL per DIC + DOC analysis). A range of model carbon compounds and Tamar River (Plymouth, UK) samples were analysed for DIC and DOC and the results showed good agreement with a high temperature catalytic oxidation (HTCO) reference method (t-test, P = 0.05)

Determination of dissolved inorganic carbon (DIC) and dissolved organic carbon (DOC) in freshwaters by sequential injection spectrophotometry with on-line UV photo-oxidation

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Tue-Ngeun, Orawan [Department of Chemistry, Faculty of Science, Chiang Mai University, Chiang Mai 50200 (Thailand); Sandford, Richard C. [School of Earth, Ocean and Environmental Sciences, University of Plymouth, Drakes Circus, Plymouth PL4 8AA (United Kingdom)]. E-mail: rsandford@plymouth.ac.uk; Jakmunee, Jaroon [Department of Chemistry, Faculty of Science, Chiang Mai University, Chiang Mai 50200 (Thailand); Grudpan, Kate [Department of Chemistry, Faculty of Science, Chiang Mai University, Chiang Mai 50200 (Thailand); McKelvie, Ian D. [Water Studies Centre, School of Chemistry, Monash University, P.O. Box 23, Clayton Campus, Vic. 3800 (Australia); Worsfold, Paul J. [School of Earth, Ocean and Environmental Sciences, University of Plymouth, Drakes Circus, Plymouth PL4 8AA (United Kingdom)

2005-12-04

An automated sequential injection (SI) method for the determination of dissolved inorganic carbon (DIC) and dissolved organic carbon (DOC) in freshwaters is presented. For DIC measurement on-line sample acidification (sulphuric acid, pH < 2), converted DIC to CO{sub 2} which subsequently diffused through a PTFE membrane into a basic, cresol red acceptor stream. The CO{sub 2} increased the concentration of the acidic form of the cresol red indicator, with a resultant decrease in absorbance at 570 nm being directly proportional to DIC concentration. DIC + DOC was determined after on-line sample irradiation (15 W low power UV lamp) coupled with acid-peroxydisulfate digestion, with the subsequent detection of CO{sub 2} as described above. DOC was determined by subtraction of DIC from (DIC + DOC). Analytical figures of merit were linear ranges of 0.05-5.0 mg C L{sup -1} for both DIC and DIC + DOC, with typical R.S.D.s of less than 7% (0.05 mg C L{sup -1}-5.3% for DIC and 6.6% for DIC + DOC; 4.0 mg C L{sup -1}-2.6% for DIC and 2.4% for DIC + DOC, n = 3) and an LOD (blank + 3S.D.) of 0.05 mg C L{sup -1}. Sample throughput for the automated system was 8 h{sup -1} for DIC and DOC with low reagent consumption (acid/peroxydisulfate 200 {mu}L per DIC + DOC analysis). A range of model carbon compounds and Tamar River (Plymouth, UK) samples were analysed for DIC and DOC and the results showed good agreement with a high temperature catalytic oxidation (HTCO) reference method (t-test, P = 0.05)

Increased dissolved organic carbon (DOC) in Central European streams is driven by reductions in ionic strength rather than climate change or decreasing acidity.

Science.gov (United States)

Hruska, Jakub; Krám, Pavel; McDowell, William H; Oulehle, Filip

2009-06-15

Temporal trends in DOC concentration and flux were investigated at two geochemically distinct forested catchments in western Czech Republic. Mean discharge-weighted DOC concentrations averaged 18.8 mg L(-1) at the acidic Lysina catchment, and 20.2 mg L(-1) at base-rich and well-buffered Pluhuv Bor. Between 1993 and 2007 DOC in streamwater increased significantly in both catchments: the mean annual increase was 0.42 mg L(-1) yr(-1) (p DOC were correlated with only modest increases in stream pH in both catchments, but large declines in ionic strength (IS), that resulted from declining atmospheric deposition. Neither catchment has undergone changes in soil-water pH, yet DOC concentrations tripled in the soil-water of both catchments. We conclude that changes in ionic strength of soil-water and streamwater, rather than acidity, are the primary drivers of changes in streamwater DOC in this region. Temperature, precipitation and discharge show no statistically significant trends during the study period, suggesting that climate change has played no role in the changes in DOC that we have observed.

TOC/DOC: "It Has Changed the Way I Do Science".

Science.gov (United States)

Douglas, Kimberly; Roth, Dana L.

1997-01-01

Describes a user-based automated service developed at the California Institute of Technology that combines access to journal article databases with an in-house document delivery system. TOC/DOC (Tables of Contents/Document Delivery) has undergone a conceptual change from a catalog of locally-held journal articles to a broader, more retrospective…

Experimental study on the particulate matter and nitrogenous compounds from diesel engine retrofitted with DOC+CDPF+SCR

Science.gov (United States)

Zhang, Yunhua; Lou, Diming; Tan, Piqiang; Hu, Zhiyuan

2018-03-01

The increasingly stringent emission regulations will mandate the retrofit of after-treatment devices for in-use diesel vehicles, in order to reduce their substantial particulate matter and nitrogen oxides (NOX) emissions. In this paper, a combination of DOC (diesel oxidation catalyst), CDPF (catalytic diesel particulate filter) and SCR (selective catalytic reduction) retrofit for a heavy-duty diesel engine was employed to perform experiment on the engine test bench to evaluate the effects on the particulate matter emissions including particle number (PN), particle mass (PM), particle size distributions and nitrogenous compounds emissions including NOX, nitrogen dioxide (NO2)/NOX, nitrous oxide (N2O) and ammonia (NH3) slip. In addition, the urea injection was also of our concern. The results showed that the DOC+CDPF+SCR retrofit almost had no adverse effect on the engine power and fuel consumption. Under the test loads, the upstream DOC and CDPF reduced the PN and PM by an average of 91.6% and 90.9%, respectively. While the downstream SCR brought about an average decrease of 85% NOX. Both PM and NOX emission factors based on this retrofit were lower than China-Ⅳ limits (ESC), and even lower than China-Ⅴ limits (ESC) at medium and high loads. The DOC and CDPF changed the particle size distributions, leading to the increase in the proportion of accumulation mode particles and the decrease in the percentage of nuclear mode particles. This indicates that the effect of DOC and CDPF on nuclear mode particles was better than that of accumulation mode ones. The upstream DOC could increase the NO2/NOX ratio to 40%, higher NO2/NOX ratio improved the efficiency of CDPF and SCR. Besides, the N2O emission increased by an average of 2.58 times after the retrofit and NH3 slip occurred with the average of 26.7 ppm. The rate of urea injection was roughly equal to 8% of the fuel consumption rate. The DOC+CDPF+SCR retrofit was proved a feasible and effective measurement in terms

Uric acid does not affect the acetylcholine-induced relaxation of aorta from normotensive and deoxycorticosterone acetate-salt hypertensive rats.

Science.gov (United States)

Szasz, Theodora; Watts, Stephanie W

2010-06-01

Uric acid (UA) results from xanthine oxidase (XO) catabolism of xanthine and is the final product of purine catabolism in humans. In this species, hyperuricemia is associated with gout, nephropathy, and increased cardiovascular disease risk. Although the effects of hyperuricemia in vascular biology are overall controversial, UA has been described as an antioxidant and as potentially improving endothelial function. Hypertension is associated with endothelial dysfunction. We hypothesized that UA improves the endothelial function of aorta from deoxycorticosterone acetate (DOCA)-salt hypertensive rats. UA (100 microM) in the presence of the uricase inhibitor oxonic acid (10 microM) did not modify relaxation to acetylcholine (ACh) (1 nM-10 microM) in the aorta from nontreated, sham normotensive, and DOCA-salt hypertensive rats [response to 10 microM ACh for UA versus vehicle, respectively: nontreated = 37 +/- 7 versus 48 +/- 7%, sham = 53 +/- 15 versus 57 +/- 20%, DOCA = 81 +/- 4 versus 85 +/- 2% from 20 microM prostaglandin 2alpha (PGF(2alpha))-induced contraction]. Allopurinol (100 microM), a XO inhibitor, did not significantly alter the ACh-induced relaxation of sham and DOCA aortic rings (response to 10 microM ACh for allopurinol versus vehicle, respectively: sham = 61 +/- 5 versus 68 +/- 9%, DOCA = 87 +/- 6 versus 88 +/- 3% from 20 microM PGF(2alpha)-induced contraction). Uricemia, ranging from unmeasurable to 547 microM in sham and to 506 microM in DOCA rats, was not significantly different between these two groups. The expression and activity of XO, as well as the expression of uricase, were not different between sham and DOCA rat aorta. We conclude that, at least in vitro, UA does not affect the ACh-induced relaxation of normotensive and DOCA-salt hypertensive rats.

Viscosity changes of riparian water controls diurnal fluctuations of stream-flow and DOC concentration

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Schwab, Michael; Klaus, Julian; Pfister, Laurent; Weiler, Markus

2015-04-01

Diurnal fluctuations in stream-flow are commonly explained as being triggered by the daily evapotranspiration cycle in the riparian zone, leading to stream flow minima in the afternoon. While this trigger effect must necessarily be constrained by the extent of the growing season of vegetation, we here show evidence of daily stream flow maxima in the afternoon in a small headwater stream during the dormant season. We hypothesize that the afternoon maxima in stream flow are induced by viscosity changes of riparian water that is caused by diurnal temperature variations of the near surface groundwater in the riparian zone. The patterns were observed in the Weierbach headwater catchment in Luxembourg. The catchment is covering an area of 0.45 km2, is entirely covered by forest and is dominated by a schistous substratum. DOC concentration at the outlet of the catchment was measured with the field deployable UV-Vis spectrometer spectro::lyser (scan Messtechnik GmbH) with a high frequency of 15 minutes over several months. Discharge was measured with an ISCO 4120 Flow Logger. During the growing season, stream flow shows a frequently observed diurnal pattern with discharge minima in the afternoon. During the dormant season, a long dry period with daily air temperature amplitudes of around 10 ° C occurred in March and April 2014, with discharge maxima in the afternoon. The daily air temperature amplitude led to diurnal variations in the water temperature of the upper 10 cm of the riparian zone. Higher riparian water temperatures cause a decrease in water viscosity and according to the Hagen-Poiseuille equation, the volumetric flow rate is inversely proportional to viscosity. Based on the Hagen-Poiseuille equation and the viscosity changes of water, we calculated higher flow rates of near surface groundwater through the riparian zone into the stream in the afternoon which explains the stream flow maxima in the afternoon. With the start of the growing season, the viscosity

Long-term inhibition of xanthine oxidase by febuxostat does not decrease blood pressure in deoxycorticosterone acetate (DOCA-salt hypertensive rats.

Directory of Open Access Journals (Sweden)

Theodora Szasz

Full Text Available Xanthine oxidase and its products, uric acid and ROS, have been implicated in the pathogenesis of cardiovascular disease, such as hypertension. We have previously reported that allopurinol inhibition of XO does not alter the progression of deoxycorticosterone acetate (DOCA-salt hypertension in rats. However other researchers have observed a reduction in blood pressure after allopurinol treatment in the same model. To resolve this controversy, in this study we used the newer and more effective XO inhibitor febuxostat, and hypothesized that a more complete XO blockade might impair hypertension development and its end-organ consequences. We used DOCA-salt hypertensive rats and administered vehicle (salt water or febuxostat (orally, 5 mg/kg/day in salt water in a short-term "reversal" experiment (2 weeks of treatment 3 weeks after DOCA-salt beginning and a long-term "prevention" experiment (treatment throughout 4 weeks of DOCA-salt. We confirmed XO inhibition by febuxostat by measuring circulating and tissue levels of XO metabolites. We found an overall increase in hypoxanthine (XO substrate and decrease in uric acid (XO product levels following febuxostat treatment. However, despite a trend for reduced blood pressure in the last week of long-term febuxostat treatment, no statistically significant difference in hemodynamic parameters was observed in either study. Additionally, no change was observed in relative heart and kidney weight. Aortic media/lumen ratio was minimally improved by long-term febuxostat treatment. Additionally, febuxostat incubation in vitro did not modify contraction of aorta or vena cava to norepinephrine, angiotensin II or endothelin-1. We conclude that XO inhibition is insufficient to attenuate hypertension in the rat DOCA-salt model, although beneficial vascular effects are possible.

Long-term inhibition of xanthine oxidase by febuxostat does not decrease blood pressure in deoxycorticosterone acetate (DOCA)-salt hypertensive rats.

Science.gov (United States)

Szasz, Theodora; Davis, Robert Patrick; Garver, Hannah S; Burnett, Robert J; Fink, Gregory D; Watts, Stephanie W

2013-01-01

Xanthine oxidase and its products, uric acid and ROS, have been implicated in the pathogenesis of cardiovascular disease, such as hypertension. We have previously reported that allopurinol inhibition of XO does not alter the progression of deoxycorticosterone acetate (DOCA)-salt hypertension in rats. However other researchers have observed a reduction in blood pressure after allopurinol treatment in the same model. To resolve this controversy, in this study we used the newer and more effective XO inhibitor febuxostat, and hypothesized that a more complete XO blockade might impair hypertension development and its end-organ consequences. We used DOCA-salt hypertensive rats and administered vehicle (salt water) or febuxostat (orally, 5 mg/kg/day in salt water) in a short-term "reversal" experiment (2 weeks of treatment 3 weeks after DOCA-salt beginning) and a long-term "prevention" experiment (treatment throughout 4 weeks of DOCA-salt). We confirmed XO inhibition by febuxostat by measuring circulating and tissue levels of XO metabolites. We found an overall increase in hypoxanthine (XO substrate) and decrease in uric acid (XO product) levels following febuxostat treatment. However, despite a trend for reduced blood pressure in the last week of long-term febuxostat treatment, no statistically significant difference in hemodynamic parameters was observed in either study. Additionally, no change was observed in relative heart and kidney weight. Aortic media/lumen ratio was minimally improved by long-term febuxostat treatment. Additionally, febuxostat incubation in vitro did not modify contraction of aorta or vena cava to norepinephrine, angiotensin II or endothelin-1. We conclude that XO inhibition is insufficient to attenuate hypertension in the rat DOCA-salt model, although beneficial vascular effects are possible.

Effect of moisture and temperature variation on DOC release from a peatland: conflicting results from laboratory, field and historical data analysis.

Science.gov (United States)

Preston, Michael D; Eimers, M Catherine; Watmough, Shaun A

2011-03-01

Peatlands are large repositories of atmospheric carbon and concern has been raised over the stability of this carbon store because increasing dissolved organic carbon (DOC) concentrations have been observed in peatland drainage waters. A number of potential causes have been proposed in the literature, and conflicting results among studies conducted at different spatial and temporal scales suggest that the methodological approach may be an important confounding factor. The objective of this study was to determine the influence of moisture and temperature on DOC release from a south-central Ontario peatland during the fall (a major export period) following three commonly used approaches: laboratory microcosms, an intensive field study and analysis of long-term data (1980-2008). The effect of variations in temperature and moisture differed among microcosm, field study and analysis of the long-term record. Water content was important at the microcosm scale as DOC concentration and aromaticity increased with peat water-saturation. Drought caused a decrease in DOC concentration and pH, and an increase in sulphate and base cation concentrations. In contrast, the field study indicated that DOC concentration was strongly associated with temperature, and weakly correlated (negatively) with stream discharge. Average fall DOC concentration (but not export) increased over the 29 year record, and was correlated with fall discharge and precipitation (negative) and summer precipitation and fall stream pH (positive). As no common strong predictor of fall DOC was found at three scales of investigation at a single, well-studied site, it may be unreasonable to expect to identify a universal driver behind the widespread increase in DOC concentration. Copyright © 2010 Elsevier B.V. All rights reserved.

Targeted delivery of miR-200c/DOC to inhibit cancer stem cells and cancer cells by the gelatinases-stimuli nanoparticles.

Science.gov (United States)

Liu, Qin; Li, Ru-Tian; Qian, Han-Qing; Wei, Jia; Xie, Li; Shen, Jie; Yang, Mi; Qian, Xiao-Ping; Yu, Li-Xia; Jiang, Xi-Qun; Liu, Bao-Rui

2013-09-01

Cancer stem cells (CSCs) are recently discovered as vital obstacles for the successful cancer therapy. Emerging evidences suggest that miR-200c functions as an effective CSCs inhibitor and can restore sensitivity to microtubule-targeting drugs. In the present work, the intelligent gelatinases-stimuli nanoparticles (NPs) was set up to co-deliver miR-200c and docetaxel (DOC) to verify their synergetic effects on inhibition of CSCs and non-CSC cancer cells. After tumor cells were treated with miR-200c NPs, miR-200c and its targeted gene class III beta-tubulin (TUBB3)TUBB3 expression were evaluated. The effects of miR-200c/DOC NPs on tumor cell viability, migration and invasion as well as the expression of E-cadherin and CD44 were studied. The antitumor effects of miR-200c/DOC NPs were compared with DOC NPs in xenograft gastric cancer mice. Moreover, the residual tumors after treatment were subcutaneously seeded into nude mice to further investigate the effective maintenance of NPs. We found that the gelatinases-stimuli NPs facilitated miR-200c into cells, achieving sustained miR-200c expression in tumor cells during 9 days. The miR-200c/DOC NPs significantly enhanced cytotoxicity of DOC, possibly by decreasing TUBB3 level, and reversing EMT. The miR-200c NPs achieved high levels of in vivo accumulation and long retention in gastric cancer xenografts after intravenous administration. The miR-200c/DOC NPs prominently suppressed in vivo tumor growth with elevated miR-200c and E-cadherin levels and down-regulated TUBB3 and CD44 expressions. When the residual tumors after miR-200c/DOC NPs treatment were re-transplanted into nude mice, the tumors demonstrated the slowest growth speed. The miR-200c/DOC NPs may provide a promising modality for co-delivery of nucleic acid and drugs to simultaneously inhibit CSCs and non-CSC cancer cells. Copyright © 2013 Elsevier Ltd. All rights reserved.

Biochar feedstock and pyrolysis temperature effects on leachate: DOC characteristics and nitrate losses from a Brazilian Cerrado Arenosol mixed with agricultural waste biochars.

Science.gov (United States)

Speratti, Alicia B; Johnson, Mark S; Sousa, Heiriane Martins; Dalmagro, Higo J; Couto, Eduardo Guimarães

2018-04-01

Dissolved organic carbon (DOC) leached from Brazilian Cerrado Arenosols can lead to carbon (C) losses and lower soil fertility, while excessive nutrient, e.g. nitrate (NO 3 - ), leaching can potentially cause water contamination. As biochar has been shown to stabilize C and retain soil nutrients, a greenhouse experiment was conducted to test different biochars' contributions to DOC and NO 3 - leaching from a sandy soil. Biochars were made from four local agricultural waste feedstocks (cotton residue, swine manure, eucalyptus sawmill residue, sugarcane filtercake) pyrolysed at 400, 500 and 600 °C. Biochar was mixed with soil at 5% weight in pots and maize seeds planted. Leachate was collected weekly for six weeks and analyzed for DOC and NO 3 - concentrations, while fluorescence spectroscopy with parallel factor analysis (PARAFAC) was used to interpret DOC characteristics. Cotton and swine manure biochar treatments had higher DOC and NO 3 - losses than eucalyptus biochar, filtercake biochar, and control treatments. Cotton and swine manure biochar treatments at high temperatures lost mostly terrestrial, humified DOC, while swine manure, filtercake, and eucalyptus biochars at low temperatures lost mostly labile, microbially-derived DOC. Through the practical use of fluorescence spectroscopy, our study identified filtercake and eucalyptus biochars as most promising for retaining DOC and NO 3 - in a Cerrado Arenosol, potentially reducing stable C and nutrient losses. Copyright © 2018 Elsevier Ltd. All rights reserved.

Fluorescence measured in situ as a proxy of CDOM absorption and DOC concentration in the Baltic Sea

Directory of Open Access Journals (Sweden)

Piotr Kowalczuk

2010-09-01

Full Text Available This study presents results from field surveys performed in 2008 and 2009 in the southern Baltic in different seasons. The main goal of these measurements was to identify the empirical relationships between DOM optical properties and DOC. CDOM absorption and fluorescence and DOC concentrations were measured during thirteen research cruises. The values of the CDOM absorption coefficient at 370 nm aCDOM(370 ranged from 0.70 m-1 to 7.94 m-1, and CDOM fluorescence intensities (ex./em. 370/460 IFl, expressed in quinine sulphate equivalent units, ranged from 3.88 to 122.97 (in filtered samples. Dissolved organic carbon (DOC concentrations ranged from 266.7 to 831.7 µM C. There was a statistically significant linear relationship between the fluorescence intensity measured in the filtered samples and the CDOM absorption coefficient aCDOM(370, R2 = 0.87. There was much more scatter in the relationship between the fluorescence intensity measured in situ (i.e. in unprocessed water samples and the CDOM absorption coefficient aCDOM(370, resulting in a slight deterioration in the coefficient of determination R2 = 0.85. This indicated that the presence of particles could impact fluorometer output during in situ deployment. A calibration experiment was set up to quantify particle impact on the instrument output in raw marine water samples relative to readings from filtered samples. The bias calculated for the absolute percentage difference between fluorescence intensities measured in raw and filtered water was low (-2.05%, but the effect of particle presence expressed as the value of the RMSE was significant and was as high as 35%. Both DOM fluorescence intensity (in raw water and filtered samples and the CDOM absorption coefficient aCDOM(370 are highly correlated with DOC concentration. The relationship between DOC and the CDOM absorption coefficient aCDOM(370 was better (R2 = 0.76 than the relationship between DOC and the respective fluorescence intensities

The role of COMT and plasma proline in the variable penetrance of autistic spectrum symptoms in 22q11.2 deletion syndrome

NARCIS (Netherlands)

Hidding, E.; Swaab, H.; de Sonneville, L. M J; van Engeland, H.; Vorstman, J. A S

2016-01-01

This paper examines how COMT158 genotypes and plasma proline levels are associated with variable penetrance of social behavioural and social cognitive problems in 22q11.2 deletion syndrome (22q11DS). Severity of autistic spectrum symptoms of 45 participants with 22q11DS was assessed using the Autism

Derivation of the physical equations solved in the inertial confinement stability code DOC. Informal report

International Nuclear Information System (INIS)

Scannapieco, A.J.; Cranfill, C.W.

1978-11-01

There now exists an inertial confinement stability code called DOC, which runs as a postprocessor. DOC (a code that has evolved from a previous code, PANSY) is a spherical harmonic linear stability code that integrates, in time, a set of Lagrangian perturbation equations. Effects due to real equations of state, asymmetric energy deposition, thermal conduction, shock propagation, and a time-dependent zeroth-order state are handled in the code. We present here a detailed derivation of the physical equations that are solved in the code

Derivation of the physical equations solved in the inertial confinement stability code DOC. Informal report

Energy Technology Data Exchange (ETDEWEB)

Scannapieco, A.J.; Cranfill, C.W.

1978-11-01

There now exists an inertial confinement stability code called DOC, which runs as a postprocessor. DOC (a code that has evolved from a previous code, PANSY) is a spherical harmonic linear stability code that integrates, in time, a set of Lagrangian perturbation equations. Effects due to real equations of state, asymmetric energy deposition, thermal conduction, shock propagation, and a time-dependent zeroth-order state are handled in the code. We present here a detailed derivation of the physical equations that are solved in the code.

Understanding the relationship between DOC and nitrate export and dominant rainfall-runoff processes through long-term high frequency measurements

Science.gov (United States)

Schwab, Michael; Klaus, Julian; Pfister, Laurent; Weiler, Markus

2016-04-01

Over the past decades, stream sampling protocols for hydro-geochemical parameters were often limited by logistical and technological constraints. While long-term monitoring protocols were typically based on weekly sampling intervals, high frequency sampling was commonly limited to a few single events. In our study, we combined high frequency and long-term measurements to understand the DOC and nitrate behaviour and dynamics for different runoff events and seasons. Our study area is the forested Weierbach catchment (0.47 km2) in Luxembourg. The fractured schist bedrock is covered by cambisol soils. The runoff response of the catchment is characterized by a double peak behaviour. A first discharge peak occurs during or right after a rainfall event (triggered by fast near surface runoff generation processes), while a second delayed peak lasts several days (generated by subsurface flow/ shallow groundwater flow). Peaks in DOC concentrations are closely linked to the first discharge peak, whereas nitrate concentrations follow the second peak. Our observations were carried out with the field deployable instrument spectro::lyser (scan Messtechnik GmbH). This instrument relies on the principles of UV-Vis spectrometry and measures DOC and nitrate concentrations. The measurements were carried out at a high frequency of 15 minutes in situ in the Weierbach creek for more than two years. In addition, a long-term validation was carried out with data obtained from the analysis of water collected with automatic samplers. The long-term, high-frequency measurements allowed us to calculate a complete and detailed balance of DOC and nitrate export over two years. Transport behaviour of the DOC and nitrate showed different dynamics between the first and second hydrograph peaks. DOC is mainly exported during first peaks, while nitrate is mostly exported during the delayed second peaks. In combination with other measurements in the catchment, the long and detailed observations have

Rapid response of hydrological loss of DOC to water table drawdown and warming in Zoige peatland: results from a mesocosm experiment.

Science.gov (United States)

Lou, Xue-Dong; Zhai, Sheng-Qiang; Kang, Bing; Hu, Ya-Lin; Hu, Li-Le

2014-01-01

A large portion of the global carbon pool is stored in peatlands, which are sensitive to a changing environment conditions. The hydrological loss of dissolved organic carbon (DOC) is believed to play a key role in determining the carbon balance in peatlands. Zoige peatland, the largest peat store in China, is experiencing climatic warming and drying as well as experiencing severe artificial drainage. Using a fully crossed factorial design, we experimentally manipulated temperature and controlled the water tables in large mesocosms containing intact peat monoliths. Specifically, we determined the impact of warming and water table position on the hydrological loss of DOC, the exported amounts, concentrations and qualities of DOC, and the discharge volume in Zoige peatland. Our results revealed that of the water table position had a greater impact on DOC export than the warming treatment, which showed no interactive effects with the water table treatment. Both DOC concentration and discharge volume were significantly increased when water table drawdown, while only the DOC concentration was significantly promoted by warming treatment. Annual DOC export was increased by 69% and 102% when the water table, controlled at 0 cm, was experimentally lowered by -10 cm and -20 cm. Increases in colored and aromatic constituents of DOC (measured by Abs(254 nm), SUVA(254 nm), Abs(400 nm), and SUVA(400 nm)) were observed under the lower water tables and at the higher peat temperature. Our results provide an indication of the potential impacts of climatic change and anthropogenic drainage on the carbon cycle and/or water storage in a peatland and simultaneously imply the likelihood of potential damage to downstream ecosystems. Furthermore, our results highlight the need for local protection and sustainable development, as well as suggest that more research is required to better understand the impacts of climatic change and artificial disturbances on peatland degradation.

Rapid response of hydrological loss of DOC to water table drawdown and warming in Zoige peatland: results from a mesocosm experiment.

Directory of Open Access Journals (Sweden)

Xue-Dong Lou

Full Text Available A large portion of the global carbon pool is stored in peatlands, which are sensitive to a changing environment conditions. The hydrological loss of dissolved organic carbon (DOC is believed to play a key role in determining the carbon balance in peatlands. Zoige peatland, the largest peat store in China, is experiencing climatic warming and drying as well as experiencing severe artificial drainage. Using a fully crossed factorial design, we experimentally manipulated temperature and controlled the water tables in large mesocosms containing intact peat monoliths. Specifically, we determined the impact of warming and water table position on the hydrological loss of DOC, the exported amounts, concentrations and qualities of DOC, and the discharge volume in Zoige peatland. Our results revealed that of the water table position had a greater impact on DOC export than the warming treatment, which showed no interactive effects with the water table treatment. Both DOC concentration and discharge volume were significantly increased when water table drawdown, while only the DOC concentration was significantly promoted by warming treatment. Annual DOC export was increased by 69% and 102% when the water table, controlled at 0 cm, was experimentally lowered by -10 cm and -20 cm. Increases in colored and aromatic constituents of DOC (measured by Abs(254 nm, SUVA(254 nm, Abs(400 nm, and SUVA(400 nm were observed under the lower water tables and at the higher peat temperature. Our results provide an indication of the potential impacts of climatic change and anthropogenic drainage on the carbon cycle and/or water storage in a peatland and simultaneously imply the likelihood of potential damage to downstream ecosystems. Furthermore, our results highlight the need for local protection and sustainable development, as well as suggest that more research is required to better understand the impacts of climatic change and artificial disturbances on peatland degradation.

Light absorption properties of colored dissolved organic matter (CDOM) in adjacent waters of the Changjiang Estuary during a flood season: implication for DOC estimation

Science.gov (United States)

Liu, Yangyang; Shen, Fang; Li, Xiuzhen

2014-11-01

Light absorption properties of colored dissolved organic matter (CDOM) in adjacent waters of the Changjiang Estuary were investigated during the summer of 2013. CDOM absorption showed a substantial portion of the total absorption and clearly dominant among most investigation stations. It generally decreased from the northwest to the southeast, which controlled by physical mixing of fresh water and seawater as was indicated by a conservative behaviour of CDOM. CDOM absorption sharply increased during phytoplankton blooms. Similarly, dissolved organic carbon (DOC) also peaked during blooms period. However, DOC exhibited a more complex behavior relative to a simple conservative mixing, possibly attributed to multiple origins of DOC. CDOM absorption and DOC co-varied to some degree, implying a potential way of DOC estimation from CDOM absorption. However, more detailed information such as CDOM and DOC composition and more validation data were required to obtain a stable CDOM - DOC pattern. Lastly, empirical algorithms with limited data were developed to retrieve CDOM absorption. Further validation of the algorithms were needed when they were to be commonly applied.

[11C]-Flumazenil metabolites: Measurements of unchanged ligand in plasma using thin layer chromatography and rapid liquid chromatography

International Nuclear Information System (INIS)

Loc'h, C.; Hantraye, Ph.; Khalili-Varasteh, M.; Maziere, B.; Delforge, J.; Brouillet, E.; Syrota, A.; Maziere, M.

1990-01-01

To study in vivo benzodiazepine (BZ) receptors using PET, Flumazenil, an imidazobenzodiazepine with selective antagonistic actions, has been labeled with 11 C on its methyl group. The accurate determination of in vivo binding parameters using biomathematical models requires the knowledge of radioligand metabolism and the measurement of the plasmatic concentration of unchanged radioligand is mandatory. The present report describes and compares rapid and simple analytical procedures to measure unchanged [ 11 C]-Flumazenil in plasma

High-Power Plasma Switch for 11.4 GHz Microwave Pulse Compressor

International Nuclear Information System (INIS)

Hirshfield, Jay L.

2010-01-01

Results obtained in several experiments on active RF pulse compression at X-band using a magnicon as the high-power RF source are presented. In these experiments, microwave energy was stored in high-Q TE01 and TE02 modes of two parallel-fed resonators, and then discharged using switches activated with rapidly fired plasma discharge tubes. Designs and high-power tests of several versions of the compressor are described. In these experiments, coherent pulse superposition was demonstrated at a 5-9 MW level of incident power. The compressed pulses observed had powers of 50-70 MW and durations of 40-70 ns. Peak power gains were measured to be in the range of 7:1-11:1 with efficiency in the range of 50-63%.

PanMetaDocs - A tool for collecting and managing the long tail of "small science data"

Science.gov (United States)

Klump, J.; Ulbricht, D.

2011-12-01

In the early days of thinking about cyberinfrastructure the focus was on "big science data". Today, the challenge is not anymore to store several terabytes of data, but to manage data objects in a way that facilitates their re-use. Key to re-use by a user as a data consumer is proper documentation of the data. Also, data consumers need discovery metadata to find the data they need and they need descriptive metadata to be able to use the data they retrieved. Thus, data documentation faces the challenge to extensively and completely describe these objects, hold the items easily accessible at a sustainable cost level. However, data curation and documentation do not rank high in the everyday work of a scientist as a data producer. Data producers are often frustrated by being asked to provide metadata on their data over and over again, information that seemed very obvious from the context of their work. A challenge to data archives is the wide variety of metadata schemata in use, which creates a number of maintenance and design challenges of its own. PanMetaDocs addresses these issues by allowing an uploaded files to be described by more than one metadata object. PanMetaDocs, which was developed from PanMetaWorks, is a PHP based web application that allow to describe data with any xml-based metadata schema. Its user interface is browser based and was developed to collect metadata and data in collaborative scientific projects situated at one or more institutions. The metadata fields can be filled with static or dynamic content to reduce the number of fields that require manual entries to a minimum and make use of contextual information in a project setting. In the development of PanMetaDocs the business logic of panMetaWorks is reused, except for the authentication and data management functions of PanMetaWorks, which are delegated to the eSciDoc framework. The eSciDoc repository framework is designed as a service oriented architecture that can be controlled through a

Simulation of low temperature combustion mechanism of different combustion-supporting agents in close-coupled DOC and DPF system.

Science.gov (United States)

Jiao, Penghao; Li, Zhijun; Li, Qiang; Zhang, Wen; He, Li; Wu, Yue

2018-07-01

In the coupled Diesel Oxidation Catalyst (DOC) and Diesel Particular Filter (DPF) system, soot cannot be completely removed by only using the passive regeneration. And DPF active regeneration is necessary. The research method in this paper is to spray different kinds of combustion-supporting agents to the DOC in the front of the DPF. Therefore, the low temperature combustion mechanism of different kinds of combustion-supporting agents in DOC was studied, in order to grasp the law of combustion in DOC, and the influence of follow-up emission on DPF removal of soot. During the study, CH 4 H 2 mixture and diesel (n-heptane + toluene) were used as combustion-supporting agents respectively. The simplified mechanisms of two kinds of gas mixtures used as the combustion-supporting agents in DPF have been constructed and testified in the paper. In this paper, the combustion and emission conditions of the two combustion-supporting agents were analyzed so as to meet the practical requirements of different working conditions. Copyright © 2017 ISA. Published by Elsevier Ltd. All rights reserved.

Deposition and light absorption characteristics of precipitation dissolved organic carbon (DOC) at three remote stations in the Himalayas and Tibetan Plateau, China.

Science.gov (United States)

Li, Chaoliu; Yan, Fangping; Kang, Shichang; Chen, Pengfei; Hu, Zhaofu; Han, Xiaowen; Zhang, Guoshuai; Gao, Shaopeng; Qu, Bin; Sillanpää, Mika

2017-12-15

The concentrations, depositions and optical properties of precipitation DOC at three remote stations (Nam Co, Lulang and Everest) were investigated in the Himalayas and Tibetan Plateau (HTP). The results showed that their volume-weighted mean DOC concentrations were 1.05±1.01mgCL -1 , 0.83±0.85mgCL -1 and 0.86±0.91mgCL -1 , respectively, close to those of other remote areas in the world and lower than those of typical polluted urban cities. Combined with precipitation amounts, the DOC depositions at these three stations were calculated to be 0.34±0.32gCm -2 yr -1 , 0.84±0.86gCm -2 yr -1 and 0.16±0.17gCm -2 yr -1 , respectively. The annual DOC deposition in the HTP was approximately 0.94±0.87TgC, the highest and lowest values appeared in the southeastern and northwestern plateau, respectively. The sources of DOC in the precipitation at these three stations were remarkably different, indicating large spatial heterogeneity in the sources of precipitation DOC over the HTP. Nam Co presented combustion sources from South Asia and local residents, Lulang showed biomass combustion source from South Asia, and Everest was mainly influenced by local mineral dust. The values of the MAC DOC at 365nm were 0.48±0.47m 2 g -1 , 0.25±0.15m 2 g -1 , and 0.64±0.49m 2 g -1 , respectively, for the precipitation at the three stations. All of these values were significantly lower than those of corresponding near-surface aerosol samples because precipitation DOC contains more secondary organic aerosol with low light absorption abilities. Additionally, this phenomenon was also observed in seriously polluted urban areas, implying it is universal in the atmosphere. Because precipitation DOC contains information for both particle-bound and gaseous components from the near surface up to the altitude of clouds where precipitation occurs, the MAC DOC of precipitation is more representative than that of near-surface aerosols for a given region. Copyright © 2017 Elsevier B.V. All rights

Land management as a factor controlling dissolved organic carbon release from upland peat soils 1: spatial variation in DOC productivity.

Science.gov (United States)

Yallop, A R; Clutterbuck, B

2009-06-01

The importance of soil storage in global carbon cycling is well recognised and factors leading to increased losses from this pool may act as a positive feedback mechanism in global warming. Upland peat soils are usually assumed to serve as carbon sinks, there is however increasing evidence of carbon loss from upland peat soils, and DOC concentrations in UK rivers have increased markedly over the past three decades. A number of drivers for increasing DOC release from peat soils have been proposed although many of these would not explain fine-scale variations in DOC release observed in many catchments. We examined the effect of land use and management on DOC production in upland peat catchments at two spatial scales within the UK. DOC concentration was measured in streams draining 50 small-scale catchments (b3 km2) in three discrete regions of the south Pennines and one area in the North Yorkshire Moors. Annual mean DOC concentration was also derived from water colour data recorded at water treatment works for seven larger scale catchments (1.5-20 km2) in the south Pennines. Soil type and land use/management in all catchments were characterised from NSRI digital soil data and ortho-corrected colour aerial imagery. Of the factors assessed, representing all combinations of soil type and land use together with catchment slope and area, the proportion of exposed peat surface resulting from new heather burning was consistently identified as the most significant predictor of variation in DOC concentration. This relationship held across all blanket peat catchments and scales. We propose that management activities are driving changes in edaphic conditions in upland peat to those more favourable for aerobic microbial activity and thus enhance peat decomposition leading to increased losses of carbon from these environments.

Four-year-BS-position-paper.pdf | misc docs | academy | Indian ...

Indian Academy of Sciences (India)

Home; academy; misc docs; Four-year-BS-position-paper.pdf. 404! error. The page your are looking for can not be found! Please check the link or use the navigation bar at the top. YouTube; Twitter; Facebook; Blog. Academy News. IAS Logo. 29th Mid-year meeting. Posted on 19 January 2018. The 29th Mid-year meeting of ...

Sources and fate of organic (DOC, POC, CDOM) and inorganic (DIC) carbon in a mangrove dominated estuary (French Guiana)

Science.gov (United States)

Ray, R.; Michaud, E.; Vantrepotte, V.; Aller, R. C.; Morvan, S.; Thouzeau, G.

2016-12-01

We studied the mangrove dominated Sinnamary estuarine system in French Guiana during the dry and wet seasons in 2015 to examine the sources, transport and fate of surface water DOC, POC and DIC along the salinity gradient and the effect of tidal fluctuations on carbon dynamics. Elemental ratios, stable isotopes and optical properties (absorption) were applied as proxies to delineate the sources and molecular structure of the organic carbon. Results showed that during the wet season there were significant net inputs of POC and DOC along the salinity gradient from mangroves and enhanced surface runoff. Time series performed during the dry season at a station in channel water adjacent to mangroves revealed mangrove-derived export and exchanges of DOC and POC during the ebb and marine algae import during the flood. DOC was the dominant form of carbon in both seasons with DOC:POC ratios typically between 13 and 40. Both δ13DOC and CDOM descriptors (e.g., S275-295 and a*412) confirmed mangrove litter leaching to be the primary contributor of high molecular weight dissolved organic matter in the wet season which was replaced by marine phytoplanktonic OC during transport offshore in the dry season. CDOM aromaticity is lower in the dry season as mangrove inputs decrease. POC showed similar trends as DOC, with maximum contributions of terrestrial litter in the river and mixing zone, and in situ production dominant in the marine zone. The entire estuary is heterotrophic, exhibiting high pCO2 (837-5575µatm) and oxygen undersaturation (59-86%) in both seasons, and substantial CO2 emission fluxes (278-3671mmol m-2 d-1). Intense local remineralization and laterally transported CO2 originating from mangrove benthic respiration could account for the water column pCO2 enrichment during low tide and night time. Keywords: Organic carbon, stable isotopes, CDOM, pCO2, mangrove, French Guiana

Plasma Chemokines in Patients with Alcohol Use Disorders: Association of CCL11 (Eotaxin-1) with Psychiatric Comorbidity

Science.gov (United States)

García-Marchena, Nuria; Araos, Pedro Fernando; Barrios, Vicente; Sánchez-Marín, Laura; Chowen, Julie A.; Pedraz, María; Castilla-Ortega, Estela; Romero-Sanchiz, Pablo; Ponce, Guillermo; Gavito, Ana L.; Decara, Juan; Silva, Daniel; Torrens, Marta; Argente, Jesús; Rubio, Gabriel; Serrano, Antonia; de Fonseca, Fernando Rodríguez; Pavón, Francisco Javier

2017-01-01

Recent studies have linked changes in peripheral chemokine concentrations to the presence of both addictive behaviors and psychiatric disorders. The present study further explore this link by analyzing the potential association of psychiatry comorbidity with alterations in the concentrations of circulating plasma chemokine in patients of both sexes diagnosed with alcohol use disorders (AUD). To this end, 85 abstinent subjects with AUD from an outpatient setting and 55 healthy subjects were evaluated for substance and mental disorders. Plasma samples were obtained to quantify chemokine concentrations [C–C motif (CC), C–X–C motif (CXC), and C–X3–C motif (CX3C) chemokines]. Abstinent AUD patients displayed a high prevalence of comorbid mental disorders (72%) and other substance use disorders (45%). Plasma concentrations of chemokines CXCL12/stromal cell-derived factor-1 (p < 0.001) and CX3CL1/fractalkine (p < 0.05) were lower in AUD patients compared to controls, whereas CCL11/eotaxin-1 concentrations were strongly decreased in female AUD patients (p < 0.001). In the alcohol group, CXCL8 concentrations were increased in patients with liver and pancreas diseases and there was a significant correlation to aspartate transaminase (r = +0.456, p < 0.001) and gamma-glutamyltransferase (r = +0.647, p < 0.001). Focusing on comorbid psychiatric disorders, we distinguish between patients with additional mental disorders (N = 61) and other substance use disorders (N = 38). Only CCL11 concentrations were found to be altered in AUD patients diagnosed with mental disorders (p < 0.01) with a strong main effect of sex. Thus, patients with mood disorders (N = 42) and/or anxiety (N = 16) had lower CCL11 concentrations than non-comorbid patients being more evident in women. The alcohol-induced alterations in circulating chemokines were also explored in preclinical models of alcohol use with male Wistar rats. Rats exposed to

15 CFR 20.1 - The purpose of DOC's age discrimination regulations.

Science.gov (United States)

2010-01-01

... NONDISCRIMINATION ON THE BASIS OF AGE IN PROGRAMS OR ACTIVITIES RECEIVING FEDERAL FINANCIAL ASSISTANCE General § 20... basis of age in programs or activities receiving Federal financial assistance. The Act and the general... 15 Commerce and Foreign Trade 1 2010-01-01 2010-01-01 false The purpose of DOC's age...

UV-visible absorbance spectroscopy as a proxy for peatland dissolved organic carbon (DOC) quantity and quality: considerations on wavelength and absorbance degradation.

Science.gov (United States)

Peacock, Mike; Evans, Chris D; Fenner, Nathalie; Freeman, Chris; Gough, Rachel; Jones, Timothy G; Lebron, Inma

2014-05-01

Absorbance in the UV or visible spectrum (UV-vis) is commonly used as a proxy for DOC concentrations in waters draining upland catchments. To determine the appropriateness of different UV-vis measurements we used surface and pore water samples from two Welsh peatlands in four different experiments: (i) an assessment of single wavelength proxies (1 nm increments between 230-800 nm) for DOC concentration demonstrated that 254 nm was more accurate than 400 nm. The highest R(2) values between absorbance and DOC concentration were generated using 263 nm for one sample set (R(2) = 0.91), and 230 nm for the other three sample sets (respective R(2) values of 0.86, 0.81, and 0.93). (ii) A comparison of different DOC concentration proxies, including single wavelength proxies, a two wavelength model, a proxy using phenolic concentration, and a proxy using the area under a UV spectrum at 250-350 nm. It was found that both a single wavelength proxy (≤263 nm) and a two wavelength model performed well for both pore water and surface water. (iii) An evaluation of the E2 : E3, E2 : E4, E4 : E6 ratios, and SUVA (absorbance at 254 nm normalised to DOC concentration) as indicators of DOC quality showed that the E4 : E6 ratio was subject to extensive variation over time, and was highly correlated between surface water and pore water, suggesting that it is a useful metric to determine temporal changes in DOC quality. (iv) A repeated weekly analysis over twelve weeks showed no consistent change in UV-vis absorbance, and therefore an inferred lack of degradation of total DOC in samples that were filtered and stored in the dark at 4 °C.

11C-ORM-13070, a novel PET ligand for brain α2C-adrenoceptors: radiometabolism, plasma pharmacokinetics, whole-body distribution and radiation dosimetry in healthy men

International Nuclear Information System (INIS)

Luoto, Pauliina; Oikonen, Vesa; Arponen, Eveliina; Helin, Semi; Virta, Jere; Virtanen, Kirsi; Roivainen, Anne; Suilamo, Sami; Herttuainen, Jukka; Hietamaeki, Johanna; Holopainen, Aila; Rouru, Juha; Sallinen, Jukka; Kailajaervi, Marita; Peltonen, Juha M.; Scheinin, Mika; Volanen, Iina; Rinne, Juha O.

2014-01-01

11 C-labelled 1-[(S)-1-(2,3-dihydrobenzo[1,2]dioxin-2-yl)methyl] -4-(3-methoxy-methylpyridin-2- yl)-piperazine ( 11 C-ORM-13070) is a novel PET tracer for imaging of α 2C -adrenoceptors in the human brain. Brain α 2C -adrenoceptors may be therapeutic targets in several neuropsychiatric disorders, including depression, schizophrenia and Alzheimer's disease. To validate the use of 11 C-ORM-13070 in humans, we investigated its radiometabolism, pharmacokinetics, whole-body distribution and radiation dose. Radiometabolism was studied in a test-retest setting in six healthy men. After intravenous injection of 11 C-ORM-13070, blood samples were drawn over 60 min. Plasma samples were analysed by radio-HPLC for intact tracer and its radioactive metabolites. Metabolite-corrected plasma time-activity curves were used for calculation of pharmacokinetics. In a separate group of 12 healthy men, the whole-body distribution of 11 C-ORM-13070 and radiation exposure were investigated by dynamic PET/CT imaging without blood sampling. Two radioactive metabolites of 11 C-ORM-13070 were detected in human arterial plasma. The proportion of unchanged 11 C-ORM-13070 decreased from 81 ± 4 % of total radioactivity at 4 min after tracer injection to 23 ± 4 % at 60 min. At least one of the radioactive metabolites penetrated into red blood cells, while the parent tracer remained in plasma. The apparent elimination rate constant and corresponding half-life of unchanged 11 C-ORM-13070 in arterial plasma were 0.0117 ± 0.0056 min -1 and 73.6 ± 35.8 min, respectively. The organs with the highest absorbed doses were the liver (12 μSv/MBq), gallbladder wall (12 μSv/MBq) and pancreas (9.1 μSv/MBq). The mean effective dose was 3.9 μSv/MBq, with a range of 3.6 - 4.2 μSv/MBq. 11 C-ORM-13070 was rapidly metabolized in human subjects after intravenous injection. The effective radiation dose of 11 C-ORM-13070 was in the same range as that of other 11 C-labelled brain receptor tracers. An injection

Integrated bicarbonate-form ion exchange treatment and regeneration for DOC removal: Model development and pilot plant study.

Science.gov (United States)

Hu, Yue; Boyer, Treavor H

2017-05-15

The application of bicarbonate-form anion exchange resin and sodium bicarbonate salt for resin regeneration was investigated in this research is to reduce chloride ion release during treatment and the disposal burden of sodium chloride regeneration solution when using traditional chloride-form ion exchange (IX). The target contaminant in this research was dissolved organic carbon (DOC). The performance evaluation was conducted in a completely mixed flow reactor (CMFR) IX configuration. A process model that integrated treatment and regeneration was investigated based on the characteristics of configuration. The kinetic and equilibrium experiments were performed to obtain required parameters for the process model. The pilot plant tests were conducted to validate the model as well as provide practical understanding on operation. The DOC concentration predicted by the process model responded to the change of salt concentration in the solution, and showed a good agreement with pilot plant data with less than 10% difference in terms of percentage removal. Both model predictions and pilot plant tests showed over 60% DOC removal by bicarbonate-form resin for treatment and sodium bicarbonate for regeneration, which was comparable to chloride-form resin for treatment and sodium chloride for regeneration. Lastly, the DOC removal was improved by using higher salt concentration for regeneration. Copyright © 2017 Elsevier Ltd. All rights reserved.

TogoDoc server/client system: smart recommendation and efficient management of life science literature.

Directory of Open Access Journals (Sweden)

Wataru Iwasaki

Full Text Available In this paper, we describe a server/client literature management system specialized for the life science domain, the TogoDoc system (Togo, pronounced Toe-Go, is a romanization of a Japanese word for integration. The server and the client program cooperate closely over the Internet to provide life scientists with an effective literature recommendation service and efficient literature management. The content-based and personalized literature recommendation helps researchers to isolate interesting papers from the "tsunami" of literature, in which, on average, more than one biomedical paper is added to MEDLINE every minute. Because researchers these days need to cover updates of much wider topics to generate hypotheses using massive datasets obtained from public databases or omics experiments, the importance of having an effective literature recommendation service is rising. The automatic recommendation is based on the content of personal literature libraries of electronic PDF papers. The client program automatically analyzes these files, which are sometimes deeply buried in storage disks of researchers' personal computers. Just saving PDF papers to the designated folders makes the client program automatically analyze and retrieve metadata, rename file names, synchronize the data to the server, and receive the recommendation lists of newly published papers, thus accomplishing effortless literature management. In addition, the tag suggestion and associative search functions are provided for easy classification of and access to past papers (researchers who read many papers sometimes only vaguely remember or completely forget what they read in the past. The TogoDoc system is available for both Windows and Mac OS X and is free. The TogoDoc Client software is available at http://tdc.cb.k.u-tokyo.ac.jp/, and the TogoDoc server is available at https://docman.dbcls.jp/pubmed_recom.

TogoDoc server/client system: smart recommendation and efficient management of life science literature.

Science.gov (United States)

Iwasaki, Wataru; Yamamoto, Yasunori; Takagi, Toshihisa

2010-12-13

In this paper, we describe a server/client literature management system specialized for the life science domain, the TogoDoc system (Togo, pronounced Toe-Go, is a romanization of a Japanese word for integration). The server and the client program cooperate closely over the Internet to provide life scientists with an effective literature recommendation service and efficient literature management. The content-based and personalized literature recommendation helps researchers to isolate interesting papers from the "tsunami" of literature, in which, on average, more than one biomedical paper is added to MEDLINE every minute. Because researchers these days need to cover updates of much wider topics to generate hypotheses using massive datasets obtained from public databases or omics experiments, the importance of having an effective literature recommendation service is rising. The automatic recommendation is based on the content of personal literature libraries of electronic PDF papers. The client program automatically analyzes these files, which are sometimes deeply buried in storage disks of researchers' personal computers. Just saving PDF papers to the designated folders makes the client program automatically analyze and retrieve metadata, rename file names, synchronize the data to the server, and receive the recommendation lists of newly published papers, thus accomplishing effortless literature management. In addition, the tag suggestion and associative search functions are provided for easy classification of and access to past papers (researchers who read many papers sometimes only vaguely remember or completely forget what they read in the past). The TogoDoc system is available for both Windows and Mac OS X and is free. The TogoDoc Client software is available at http://tdc.cb.k.u-tokyo.ac.jp/, and the TogoDoc server is available at https://docman.dbcls.jp/pubmed_recom.

'Ike Wai Professional Development Model for Students and Post-docs

Science.gov (United States)

Bruno, B. C.

2016-12-01

'Ike Wai: Securing Hawaii's Water Future, funded by NSF EPSCoR, is an interdisciplinary research collaboration among geophysicists, geochemists, engineers, microbiologists, computational modelers, data scientists and social scientists. Key questions include: How much water is there? How does it flow? How long will it last? Undergraduate students, graduate students and post-docs are actively involved in the research, and their professional development is a key part of the project. An underlying principle is that students assume responsibility for their own learning and professional development. Based on the model created by the NSF Center for Microbial Oceanography: Research and Education (C-MORE) (Bruno et al, 2008; Guannel et al 2014, Bottjer et al 2014), the 'Ike Wai professional development program includes (1) Leadership. Each student and post-doc creates an Individualized Professional Development plan, which includes leadership training (provided by external facilitators) and assuming leadership roles (such as developing and implementing trainings for their peers). (2) EDventures. Based on the C-MORE model, EDventures combines proposal-writing training with the incentive of seed money. Rather than providing training a priori, the EDventures model encourages students and post-docs to write a proposal based on guidelines provided. Training occurs during a two-stage review stage: proposers respond to panel reviews and resubmit their proposal within a single review cycle. C-MORE EDventures alumni self-report statistically significant confidence gains on all questions posed. Their subsequent proposal success is envious: of the 12 proposals submitted by to NSF, 50% were funded. (Wood Charlson & Bruno, 2015) (3) Layered Mentoring Network. All ´Ike Wai participants serve as both mentor and mentee. Students are matched with a non-research mentor in addition to their advisor to promote a holistic approach to career development. They will also serve as mentors to more

Decreasing DOC trends in soil solution along the hillslopes at two IM sites in southern Sweden--geochemical modeling of organic matter solubility during acidification recovery.

Science.gov (United States)

Löfgren, Stefan; Gustafsson, Jon Petter; Bringmark, Lage

2010-12-01

Numerous studies report increased concentrations of dissolved organic carbon (DOC) during the last two decades in boreal lakes and streams in Europe and North America. Recently, a hypothesis was presented on how various spatial and temporal factors affect the DOC dynamics. It was concluded that declining sulphur deposition and thereby increased DOC solubility, is the most important driver for the long-term DOC concentration trends in surface waters. If this recovery hypothesis is correct, the DOC levels should increase both in the soil solution as well as in the surrounding surface waters as soil pH rises and the ionic strength declines due to the reduced input of SO(4)(2-) ions. In this project a geochemical model was set up to calculate the net humic charge and DOC solubility trends in soils during the period 1996-2007 at two integrated monitoring sites in southern Sweden, showing clear signs of acidification recovery. The Stockholm Humic Model was used to investigate whether the observed DOC solubility is related to the humic charge and to examine how pH and ionic strength influence it. Soil water data from recharge and discharge areas, covering both podzols and riparian soils, were used. The model exercise showed that the increased net charge following the pH increase was in many cases counteracted by a decreased ionic strength, which acted to decrease the net charge and hence the DOC solubility. Thus, the recovery from acidification does not necessarily have to generate increasing DOC trends in soil solution. Depending on changes in pH, ionic strength and soil Al pools, the trends might be positive, negative or indifferent. Due to the high hydraulic connectivity with the streams, the explanations to the DOC trends in surface waters should be searched for in discharge areas and peat lands. Copyright © 2010 Elsevier B.V. All rights reserved.

Production and decomposition of new DOC by marine plankton communities: carbohydrates, refractory components and nutrient limitation

DEFF Research Database (Denmark)

Kragh, T.; Søndergaard, Morten

2009-01-01

The accumulation and biodegradation of dissolved organic carbon (DOC) and dissolved and particulate combined neutral sugars (DCNS, PCNS) were followed during a period of 22 days in experimental marine phytoplankton incubations. Five different growth regimes were established in 11 m(3) coastal...... in the mesocosms with diatoms dominating could be explained by DCNS, while only 6% was explained in the mesocosms with few diatoms. PCNS composition was similar in all mesocosms and with dominance of glucose and mannose, while DCNS were more evenly distributed with the following mole percentages fucose 15......, rhamnose 14, arabinose 6, galactose 27, glucose 20 and mannose 18%. The DCNS composition did not reflect the PCNS composition at any time during the experiment. Accumulated DCNS were quickly degraded and only 1% of the new RDOC was explained by DCNS. RDOC accumulated after day #17 in the two mesocosms...

DOC1-Dependent Recruitment of NURD Reveals Antagonism with SWI/SNF during Epithelial-Mesenchymal Transition in Oral Cancer Cells

Directory of Open Access Journals (Sweden)

Adone Mohd-Sarip

2017-07-01

Full Text Available The Nucleosome Remodeling and Deacetylase (NURD complex is a key regulator of cell differentiation that has also been implicated in tumorigenesis. Loss of the NURD subunit Deleted in Oral Cancer 1 (DOC1 is associated with human oral squamous cell carcinomas (OSCCs. Here, we show that restoration of DOC1 expression in OSCC cells leads to a reversal of epithelial-mesenchymal transition (EMT. This is caused by the DOC1-dependent targeting of NURD to repress key transcriptional regulators of EMT. NURD recruitment drives extensive epigenetic reprogramming, including eviction of the SWI/SNF remodeler, formation of inaccessible chromatin, H3K27 deacetylation, and binding of PRC2 and KDM1A, followed by H3K27 methylation and H3K4 demethylation. Strikingly, depletion of SWI/SNF mimics the effects of DOC1 re-expression. Our results suggest that SWI/SNF and NURD function antagonistically to control chromatin state and transcription. We propose that disturbance of this dynamic equilibrium may lead to defects in gene expression that promote oncogenesis.

SPM analysis of parametric (R)-[11C]PK11195 binding images: plasma input versus reference tissue parametric methods

NARCIS (Netherlands)

Schuitemaker, Alie; van Berckel, Bart N. M.; Kropholler, Marc A.; Veltman, Dick J.; Scheltens, Philip; Jonker, Cees; Lammertsma, Adriaan A.; Boellaard, Ronald

2007-01-01

(R)-[11C]PK11195 has been used for quantifying cerebral microglial activation in vivo. In previous studies, both plasma input and reference tissue methods have been used, usually in combination with a region of interest (ROI) approach. Definition of ROIs, however, can be labourious and prone to

panMetaDocs, eSciDoc, and DOIDB—An Infrastructure for the Curation and Publication of File-Based Datasets for GFZ Data Services

Directory of Open Access Journals (Sweden)

Damian Ulbricht

2016-03-01

Full Text Available The GFZ German Research Centre for Geosciences is the national laboratory for Geosciences in Germany. As part of the Helmholtz Association, providing and maintaining large-scale scientific infrastructures are an essential part of GFZ activities. This includes the generation of significant volumes and numbers of research data, which subsequently become source materials for data publications. The development and maintenance of data systems is a key component of GFZ Data Services to support state-of-the-art research. A challenge lies not only in the diversity of scientific subjects and communities, but also in different types and manifestations of how data are managed by research groups and individual scientists. The data repository of GFZ Data Services provides a flexible IT infrastructure for data storage and publication, including minting of digital object identifiers (DOI. It was built as a modular system of several independent software components linked together through Application Programming Interfaces (APIs provided by the eSciDoc framework. Principal application software are panMetaDocs for data management and DOIDB for logging and moderating data publications activities. Wherever possible, existing software solutions were integrated or adapted. A summary of our experiences made in operating this service is given. Data are described through comprehensive landing pages and supplementary documents, like journal articles or data reports, thus augmenting the scientific usability of the service.

Seasonal estimates of DOC standing stocks in Apalachicola Bay estuary: Towards a better understanding using field, ocean color and model data

Science.gov (United States)

D'Sa, E. J.; Joshi, I.; Osburn, C. L.; Bianchi, T. S.; Ko, D. S.; Oviedo-Vargas, D.; Arellano, A.; Ward, N.

2016-12-01

Apalachicola Bay, a semi-enclosed estuary located in Florida's panhandle, is well known for its water quality and oyster yields. We present the use of combined field and ocean color satellite observations and the outputs of a high-resolution hydrodynamic model to study the influence of physical processes on the distribution and the transport of terrestrially derived CDOM and DOC to shelf waters during the spring and fall of 2015. Determination of DOC stocks were based on the development of a CDOM algorithm (R2 = 0.87, N = 9) for the VIIRS ocean color sensor, and the assessment of CDOM - DOC relationships (R2 = 0.88, N = 13 in March; R2 = 0.83, N = 24 in November) for the Apalachicola Bay. Satellite-derived CDOM and DOC maps together with model-based salinity distributions revealed their spatial extent, sources and transport to the shelf water. Furthermore, strong seasonal influence on DOM distribution in the bay was associated with inputs from Apalachicola and Carrabelle Rivers and the surrounding marshes. Estimates of DOC standing stocks in the bay obtained using ocean color data and high-resolution bathymetry showed relatively higher stocks in November ( 3.71 × 106 kg C, 560 km2) than in March ( 4.07 × 106 kg C, 560 km2) despite lower river discharge in dry season. Results of DOC flux estimates from the bay to coastal waters will also be presented.

Tratamento da superfície de cateteres de poliamida 11 por plasma de oxigênio

Directory of Open Access Journals (Sweden)

Gean V. Salmoria

2013-01-01

Full Text Available A poliamida 11, assim como grande parte dos polímeros empregados na construção de dispositivos minimamente invasivos de uso médico, não apresenta significativa interação com líquidos polares, o que limita seu uso em algumas aplicações, uma vez que a maioria dos tecidos biológicos internos apresenta caráter hidrofílico (alta afinidade por água. No presente trabalho, investigou-se a influência do processo de tratamento por plasma de oxigênio da superfície da poliamida 11 sobre a composição, rugosidade e a hidrofilicidade. Através do tratamento, as características do material foram alteradas de forma a favorecer a adesão de uma camada polimérica hidrofílica sobre sua superfície, aumentando a hidrofilicidade e, consequentemente, a biocompatibilidade do dispositivo polimérico. Cateteres de poliamida 11 foram submetidos a diferentes tempos de exposição ao plasma, gerado sob uma atmosfera de oxigênio com pressão, temperatura e voltagem constante. Para isso, foram realizadas análises de espectroscopia de infravermelho, microscopia eletrônica de varredura e medida do ângulo de molhamento por água na superfície do polímero. As amostras tratadas e não tratadas (controle foram caracterizadas e constatou-se um aumento na rugosidade e no ângulo de contato, indicando uma possível melhora da aderência da camada polimérica hidrofílica a ser depositada.

Longitudinal analyses of the steroid metabolome in obese PCOS girls with weight loss.

Science.gov (United States)

Reinehr, Thomas; Kulle, Alexandra; Rothermel, Juliane; Knop-Schmenn, Caroline; Lass, Nina; Bosse, Christina; Holterhus, Paul-Martin

2017-05-01

The underlying mechanisms of polycystic ovarian syndrome (PCOS) are not fully understood yet. The aim of the study was to get functional insights into the regulation of steroid hormones in PCOS by steroid metabolomics. This is a longitudinal study of changes of steroid hormones in 40 obese girls aged 13-16 years (50% with PCOS) participating in a 1-year lifestyle intervention. Girls with and without PCOS were matched to age, BMI and change of weight status. We measured progesterone, 17-hydroxyprogesterone, 17-hydroxyprogenolon, 11-deoxycorticosterone, 21-deoxycorticosterone, deoxycorticosterone, corticosterone, 11-deoxycortisol, cortisol, cortisone, androstenedione, testosterone, dehydroepiandrostendione-sulfate (DHEA-S), estrone and estradiol by LC-MS/MS steroid profiling at baseline and one year later. At baseline, obese PCOS girls demonstrated significantly higher androstenedione and testosterone concentrations compared to obese girls without PCOS, whereas the other steroid hormones including glucocorticoids, mineralocorticoids, estrogens and precursors of androgens did not differ significantly. Weight loss in obese PCOS girls was associated with a significant decrease of testosterone, androstenedione, DHEA-S, cortisol and corticosterone concentrations. Weight loss in obese non-PCOS girls was associated with a significant decrease of DHEA-S, cortisol and corticosterone concentrations, whereas no significant changes of testosterone and androstenedione concentrations could be observed. Without weight loss, no significant changes of steroid hormones were measured except an increase of estradiol in obese PCOS girls without weight loss. The key steroid hormones in obese adolescents with PCOS are androstenedione and testosterone, whereas glucocorticoids, mineralocorticoids, estrogens and precursors of androgens did not differ between obese girls with and without PCOS. © 2017 The authors.

High-frequency DOC and nitrate measurements provide new insights into their export and their relationships to rainfall-runoff processes

Science.gov (United States)

Schwab, Michael; Klaus, Julian; Pfister, Laurent; Weiler, Markus

2015-04-01

Over the past decades, stream sampling protocols for environmental tracers were often limited by logistical and technological constraints. Long-term sampling programs would typically rely on weekly sampling campaigns, while high-frequency sampling would remain restricted to a few days or hours at best. We stipulate that the currently predominant sampling protocols are too coarse to capture and understand the full amplitude of rainfall-runoff processes and its relation to water quality fluctuations. Weekly sampling protocols are not suited to get insights into the hydrological system during high flow conditions. Likewise, high frequency measurements of a few isolated events do not allow grasping inter-event variability in contributions and processes. Our working hypothesis is based on the potential of a new generation of field-deployable instruments for measuring environmental tracers at high temporal frequencies over an extended period. With this new generation of instruments we expect to gain new insights into rainfall-runoff dynamics, both at intra- and inter-event scales. Here, we present the results of one year of DOC and nitrate measurements with the field deployable UV-Vis spectrometer spectro::lyser (scan Messtechnik GmbH). The instrument measures the absorption spectrum from 220 to 720 nm in situ and at high frequencies and derives DOC and nitrate concentrations. The measurements were carried out at 15 minutes intervals in the Weierbach catchment (0.47 km2) in Luxemburg. This fully forested catchment is characterized by cambisol soils and fractured schist as underlying bedrock. The time series of DOC and nitrate give insights into the high frequency dynamics of stream water. Peaks in DOC concentrations are closely linked to discharge peaks that occur during or right after a rainfall event. Those first discharge peaks can be linked to fast near surface runoff processes and are responsible for a remarkable amount of DOC export. A special characterisation of

Microstructural characterization and tribological behavior of surface plasma Zr-Er alloying on TC11 alloy

Science.gov (United States)

Wei, Dongbo; Zhang, Pingze; Liu, Yingchao; Chen, Xiaohu; Ding, Feng; Li, Fengkun

2018-02-01

The Zr coating and Zr-Er coating are grown on TC11 substrate by double-glow plasma surface metallurgy technique, followed by the wear tests at ambient temperature and 500 °C. The data of nanohardness and elastic modulus of the samples are collected by the nano-indentation test. The adhesion strength of coatings is investigated by means of the scratch test. The study of wear resistance is performed using a ball-on-disc wear test system by running against the Si3N4 ball and measured by scanning electron microscope (SEM) and X-ray diffraction (XRD). Experimental results indicate that the nanohardness of the Zr coating and Zr-Er coating are 5.94 GPa and 7.98 GPa, respectively, which are 1.79 times and 2.41 times greater than that of TC11 substrate. Zr coating and Zr-Er coating realize the metallurgical bonding with TC11 substrate with continuous and compact structure. Compared with the Zr coating and TC11, the Zr-Er coating presents the lowest specific wear rates, which are 1.689 × 10-6 mm3 Nm-1 and 1.851 × 10-6 mm3 Nm-1 at ambient temperature and 500 °C respectively, indicating the excellent and improved wear resistance of TC11.

Development of fast video recording of plasma interaction with a lithium limiter on T-11M tokamak

Energy Technology Data Exchange (ETDEWEB)

Lazarev, V.B., E-mail: v_lazarev@triniti.ru [SSC RF TRINITI Troitsk, Moscow (Russian Federation); Dzhurik, A.S.; Shcherbak, A.N. [SSC RF TRINITI Troitsk, Moscow (Russian Federation); Belov, A.M. [NRC “Kurchatov Institute”, Moscow (Russian Federation)

2016-11-15

Highlights: • The paper presents the results of the study of tokamak plasma interaction with lithium capillary-porous system limiters and PFC by high-speed color camera. • Registration of emission near the target in SOL in neutral lithium light and e-folding length for neutral Lithium measurements. • Registration of effect of MHD instabilities on CPS Lithium limiter. • A sequence of frames shows evolution of lithium bubble on the surface of lithium limiter. • View of filament structure near the plasma edge in ohmic mode. - Abstract: A new high-speed color camera with interference filters was installed for fast video recording of plasma-surface interaction with a Lithium limiter on the base of capillary-porous system (CPS) in T-11M tokamak vessel. The paper presents the results of the study of tokamak plasma interaction (frame exposure time up to 4 μs) with CPS Lithium limiter in a stable stationary phase, unstable regimes with internal disruption and results of processing of the image of the light emission around the probe, i.e. e-folding length for neutral Lithium penetration and e-folding length for Lithium ion flux in SOL region.

STS-82 Pilot Scott J. 'Doc' Horowitz Suit Up

Science.gov (United States)

1997-01-01

STS-82 Pilot Scott J. 'Doc' Horowitz puts on a glove of his launch and entry suit with assistance from a suit technician in the Operations and Checkout Building. This is Horowitz''';s second space flight. He and the six other crew members will depart shortly for Launch Pad 39A, where the Space Shuttle Discovery awaits liftoff on a 10-day mission to service the orbiting Hubble Space Telescope (HST). This will be the second HST servicing mission. Four back-to-back spacewalks are planned.

Fluorescence measured in situ as a proxy of CDOM absorption and DOC concentration in the Baltic Sea

OpenAIRE

Piotr Kowalczuk; Monika Zabłocka; Sławomir Sagan; Karol Kuliński

2010-01-01

This study presents results from field surveys performed in 2008 and 2009 in the southern Baltic in different seasons. The main goal of these measurements was to identify the empirical relationships between DOM optical properties and DOC. CDOM absorption and fluorescence and DOC concentrations were measured during thirteen research cruises. The values of the CDOM absorption coefficient at 370 nm aCDOM(370) ranged from 0.70 m-1 to 7.94 m-1, and CDOM fluorescence intensities (ex./em. 370/460) I...

Using Eco-hydrologic modeling in the Penobscot River Watershed to explore the role of climate and land use change on DOC concentration and flux

Science.gov (United States)

Rouhani, S. F. B. B.; Schaaf, C.; Douglas, E. M.; Huntington, T. G.; Kim, J.

2017-12-01

Dissolved Organic Carbon leaches from the terrestrial watersheds to serve as one of the largest sources of marine DOC. Runoff, slope, soil organic matter and land cover characteristics are the primary spatial factors controlling the variability of fluvial Dissolved Organic Carbon fluxes through the catchment. In large, more heterogeneous catchments, streamflow dissolved organic carbon dynamics are regulated by the combined effect of hydrological mechanisms and the proportion of major landscape elements, such as wetland and forested areas. A number of studies have demonstrated that the amount of wetlands, especially peatlands, controls the watershed level transport of DOC in streams.The Penobscot River Watershed is located in north-central Maine and drains into the Gulf of Maine. It is the second largest watershed in New England. The Penobscot River Watershed is primarily forested but also contains extensive bogs, marshes, and wooded swamps.Studying the spatial and temporal changes in DOC export in the Penobscot River Watershed allows us to better understand and detect carbon sinks to carbon source shifts (or vice versa) in northern forested ecosystems.The Regional Hydro-Ecological Simulation System, is a physical process based terrestrial model that has the ability to simulate both the source and transportation of DOC by combining both hydrological and ecological processes. The study is focused on simulating the DOC concentration and flux with RHESSys in the Penobscot River Watershed. The simulated results are compared with field measurements of DOC from the watershed and the model results from the LOADEST and the temporal DOC export patterns are explored. Future changes in the amount of streamflow DOC will also be investigated by using projected land cover and climate change scenarios. Incremental increases in the loss of wetland areas have been implemented to explore the sensitivity of this watershed to wetland loss and progressive changes in forested land cover

Could combined sleep and pain evaluation be useful in the diagnosis of disorders of consciousness (DOC)? Preliminary findings.

Science.gov (United States)

Aricò, Irene; Naro, Antonino; Pisani, Laura Rosa; Leo, Antonino; Muscarà, Nunzio; De Salvo, Simona; Silvestri, Rosalia; Bramanti, Placido; Calabrò, Rocco Salvatore

2016-01-01

The diagnosis of Disorders of Consciousness (DOC) is still challenging. Indeed, ~ 40% of patients in vegetative state (VS) are misdiagnosed, suggesting the need of more appropriate diagnostic tools. Emerging data are showing that EEG, including sleep structure evaluation and multimodal evoked potential recording could be helpful in DOC diagnosis. Moreover, pain perception evaluation could further increase diagnosis accuracy in such individuals. Fourteen individuals with DOC, due to severe brain injury, were enrolled and admitted to the Intensive Neurorehabilitation Unit of the Research Institute. All patients were evaluated by means of the Coma Recovery Scale-Revised, a 24(hh)-polysomnography and a Laser Evoked Potential (LEP) paradigm. Clinically-defined patients in Minimally Consciousness State showed a more preserved sleep structure, physiologic hypnic figures and preserved REM/NREM sleep distribution than subjects in VS. LEP showed increased latencies and reduced amplitudes and were also detectable in patients with more structured sleep. The data support previous findings concerning the importance of sleep study in DOC diagnosis, with more specific neurophysiological paradigms. Interestingly, the findings shed some light on the possible correlations among global brain connectivity, sleep structure and pain perception, which are related to the activity of the wide thalamo-cortical and cortico-cortical networks underlying consciousness.

Association of ABCB1, β tubulin I, and III with multidrug resistance of MCF7/DOC subline from breast cancer cell line MCF7.

Science.gov (United States)

Li, Wentao; Zhai, Baoping; Zhi, Hui; Li, Yuhong; Jia, Linjiao; Ding, Chao; Zhang, Bin; You, Wei

2014-09-01

Docetaxel is a first-line chemotherapeutic agent for treating advanced breast cancer. The development of chemoresistance or multidrug resistance (MDR), however, results in breast cancer chemotherapy failure. This study aims to explore the molecular mechanisms underlying docetaxel-resistance in treatment of breast cancer. The docetaxel-resistant subline MCF7/DOC, derived from the parental sensitive breast cancer cell line MCF7, was established by intermittent exposure to moderate concentrations of docetaxel, followed by examination of its phenotypes. The MCF7/DOC subline showed cross resistance against paclitaxel, doxorubicin, methotrexate, and 5-Fu. Compared to the parental MCF7, MCF7/DOC cells were enlarged with heterogeneous sizes and a cobblestone and polygonal appearance. They were arrested at G2/M phase and proliferated slowly. The colony formation potential of MCF7/DOC in soft agar was significantly increased. MCF7/DOC cells showed reduced intracellular accumulation and increased efflux of rhodamine 123. The mRNA expression level of adenosine triphosphate binding cassette (ABC) transporter family, i.e., ABCB1, ABCC1, ABCC2, ABCG2, and β tubulin isotypes were characterized by quantitative PCR. High-level expression of ABCB1, βI, and βIII tubulin mRNA in MCF7/DOC was detected. Downregulation of ABCB1, βI, and βIII tubulin mediated by three combined siRNAs resulted in stronger growth inhibition of MCF7/DOC than inhibition of the expression of individual genes. ABCB1, βI, and βIII tubulin might contribute to the MDR of MCF7/DOC and be potential therapeutic targets for overcoming MDR of breast cancer.

Mobilisation and immobilisation of uranium-DOC-species in three waste dumps in the district of Schlema/Alberoda

International Nuclear Information System (INIS)

Kupsch, H.

1998-01-01

The modelling of geochemical processes needs the detailed and comprehensive knowledge of all chemical interactions which are able to exist in the flow path of waste dumps, soils and aquifer. This includes the adsorption, displacement and transport of heavy metal species of fulvic and humic acids which represent the main amount of DOC in the liquid / solid system of flow path. Comparative measurements of DOC concentrations in the input and output flow at the three waste dumps in the district Schlema / Alberoda have indicated that DOC is produced and / or supplied within of waste dumps. The speciation of heavy metal compounds of fulvic and humic acids was realized by means of two methods (sequential chromatographic analysis SCA; ions focussed electrophoresis IFE). Between 5 and 20% of uranium in the flow path exist in the form of fulvic and humic acids species in which the bond of uranium is permanently. Their distribution coefficients are strongly correlated with the pH values of the several geochemical systems. (orig.) [de

¹H, ¹³C, and ¹⁵N backbone and side-chain chemical shift assignment of the toxin Doc in the unbound state.

Science.gov (United States)

De Gieter, Steven; Loris, Remy; van Nuland, Nico A J; Garcia-Pino, Abel

2014-04-01

Toxin-antitoxin (TA) modules in bacteria are involved in pathogenesis, antibiotic stress response, persister formation and programmed cell death. The toxin Doc, from the phd/doc module, blocks protein synthesis by targeting the translation machinery. Despite a large wealth of biophysical and biochemical data on the regulatory aspects of the operon transcription and role of Doc co-activator and co-repressor, little is still know on the molecular basis of Doc toxicity. Structural information about this toxin is only available for its inhibited state bound to the antitoxin Phd. Here we report the (1)H, (15)N and (13)C backbone and side chain chemical shift assignments of the toxin Doc from of bacteriophage P1 (the model protein from this family of TA modules) in its free state. The BMRB accession number is 18899.

Spatial patterns of DOC concentration and DOM optical properties in a Brazilian tropical river-wetland system

Science.gov (United States)

Dalmagro, Higo J.; Johnson, Mark S.; de Musis, Carlo R.; Lathuillière, Michael J.; Graesser, Jordan; Pinto-Júnior, Osvaldo B.; Couto, Eduardo G.

2017-08-01

The Cerrado (savanna) and Pantanal (wetland) biomes of Central Western Brazil have experienced significant development activity in recent decades, including extensive land cover conversion from natural ecosystems to agriculture and urban expansion. The Cuiabá River transects the Cerrado biome prior to inundating large areas of the Pantanal, creating one of the largest biodiversity hot spots in the world. We measured dissolved organic carbon (DOC) and the optical absorbance and fluorescence properties of dissolved organic matter (DOM) from 40 sampling locations spanning Cerrado and Pantanal biomes during wet and dry seasons. In the upper, more agricultural region of the basin, DOC concentrations were highest in the rainy season with more aromatic and humified DOM. In contrast, DOC concentrations and DOM optical properties were more uniform for the more urbanized middle region of the basin between wet and dry seasons, as well as across sample locations. In the lower region of the basin, wet season connectivity between the river and the Pantanal floodplain led to high DOC concentrations, a fourfold increase in humification index (HIX) (an indicator of DOM humification), and a 50% reduction in the spectral slope (SR). Basin-wide, wet season values for SR, HIX, and FI (fluorescence index) indicated an increasing representation of terrestrially derived DOM that was more humified. Parallel factor analysis identified two terrestrially derived components (C1 and C2) representing 77% of total fluorescing DOM (fDOM). A third, protein-like fDOM component increased markedly during the wet season within the more urban-impacted region.

CDOM fluorescence as a proxy of DOC concentration in natural waters : a comparison of four contrasting tropical systems

OpenAIRE

Rochelle Newall, Emma; Hulot, F. D.; Janeau, Jean-Louis; Merroune, A.

2014-01-01

Chromophoric dissolved organic matter (CDOM) fluorescence or absorption is often proposed as a rapid alternative to chemical methods for the estimation of bulk dissolved organic carbon (DOC) concentration in natural waters. However, the robustness of this method across a wide range of systems remains to be shown. We measured CDOM fluorescence and DOC concentration in four tropical freshwater and coastal environments (estuary and coastal, tropical shallow lakes, water from the freshwater lens ...

Strategies for the generation of parametric images of [11C]PIB with plasma input functions considering discriminations and reproducibility.

Science.gov (United States)

Edison, Paul; Brooks, David J; Turkheimer, Federico E; Archer, Hilary A; Hinz, Rainer

2009-11-01

Pittsburgh compound B or [11C]PIB is an amyloid imaging agent which shows a clear differentiation between subjects with Alzheimer's disease (AD) and controls. However the observed signal difference in other forms of dementia such as dementia with Lewy bodies (DLB) is smaller, and mild cognitively impaired (MCI) subjects and some healthy elderly normals may show intermediate levels of [11C]PIB binding. The cerebellum, a commonly used reference region for non-specific tracer uptake in [11C]PIB studies in AD may not be valid in Prion disorders or monogenic forms of AD. The aim of this work was to: 1-compare methods for generating parametric maps of [11C]PIB retention in tissue using a plasma input function in respect of their ability to discriminate between AD subjects and controls and 2-estimate the test-retest reproducibility in AD subjects. 12 AD subjects (5 of which underwent a repeat scan within 6 weeks) and 10 control subjects had 90 minute [11C]PIB dynamic PET scans, and arterial plasma input functions were measured. Parametric maps were generated with graphical analysis of reversible binding (Logan plot), irreversible binding (Patlak plot), and spectral analysis. Between group differentiation was calculated using Student's t-test and comparisons between different methods were made using p values. Reproducibility was assessed by intraclass correlation coefficients (ICC). We found that the 75 min value of the impulse response function showed the best group differentiation and had a higher ICC than volume of distribution maps generated from Logan and spectral analysis. Patlak analysis of [11C]PIB binding was the least reproducible.

A MIXED METHODS ANALYSIS OF THE EFFECT OF GOOGLE DOCS ENVIRONMENT ON EFL LEARNERS’ WRITING PERFORMANCE AND CAUSAL ATTRIBUTIONS FOR SUCCESS AND FAILURE

Directory of Open Access Journals (Sweden)

Zari Sadat SEYYEDREZAIE

2016-07-01

Full Text Available This study investigated the effect of writing process in Google Docs environment on Iranian EFL learners’ writing performance. It also examined students’ perceptions towards the effects of Google Docs and their perceived causes of success or failure in writing performance. In this regard, 48 EFL students were chosen based on their IELTs writing test scores. During the treatment, the students were taught how to write a formal five-paragraph essay in the class, but they were supposed to practice writing process and give feedback to their peers’ essays through Google Docs. At the end of the treatment phase, the participants received another sample of IELTs writing test (posttest. Moreover, 20 participants were interviewed for their perceptions regarding the causes for their success and failure and the influence of Google Docs on their writing performance. The analysis of a Paired-Sample t-test revealed that Google Docs played an effective role in improving students’ writing performance. In addition, the analysis of interview revealed that the students perceived both internal and external causes for their success and failure; but in case of failure, internal factors were cited more often than external ones. Also, it was revealed that students generally showed positive attitude towards the implication of Google Docs as a factor leading to success in their writing performance.

Hydrologic controls on DOC, As and Pb export from a polluted peatland - the importance of heavy rain events, antecedent moisture conditions and hydrological connectivity

Science.gov (United States)

Broder, T.; Biester, H.

2015-08-01

Bogs can store large amounts of lead (Pb) and arsenic (As) from atmospheric deposition of anthropogenic emissions. Pb and As are exported along with dissolved organic carbon (DOC) from these organic-rich systems, but it is not yet clear which hydrological (pre)conditions favor their export. This study combines a 1-year monitoring of precipitation, bog water level and pore water concentration changes with bog discharge and DOC, iron, As and Pb stream concentrations. From these data, annual DOC, As, and Pb exports were calculated. Concentrations ranged from 5 to 30 mg L-1 for DOC, 0.2 to 1.9 μg L-1 for As, and 1.3 to 12 μg L-1 for Pb, with highest concentrations in late summer. As and Pb concentrations significantly correlated with DOC concentrations. Fluxes depended strongly on discharge, as 40 % of As and 43 % of Pb were exported during 10 % of the time with the highest discharge, pointing out the over-proportional contribution of short-time, high-discharge events to annual As, Pb and DOC export. Exponential increase in element export from the bog is explained by connection of additional DOC, As and Pb pools in the acrotelm during water table rise, which is most pronounced after drought. Pb, As and DOC concentrations in pore water provide evidence of an increase in the soluble Pb pool as soon as the peat layer becomes hydrologically connected, while DOC and As peak concentrations in runoff lag behind in comparison to Pb. Our data indicate a distinct bog-specific discharge threshold of 8 L s-1, which is thought to depend mainly on the bogs size and drainage conditions. Above this threshold, element concentrations do not further increase and discharge becomes diluted. Combining pore water and discharge data shows that As and Pb exports are dependent on not only the amount of precipitation and discharge but also on the frequency and depth of water table fluctuations. Comparing the annual bog As and Pb export with element inventories indicates that As is much more

Longitudinal analyses of the steroid metabolome in obese PCOS girls with weight loss

Directory of Open Access Journals (Sweden)

Thomas Reinehr

2017-05-01

Full Text Available Objective: The underlying mechanisms of polycystic ovarian syndrome (PCOS are not fully understood yet. The aim of the study was to get functional insights into the regulation of steroid hormones in PCOS by steroid metabolomics. Design: This is a longitudinal study of changes of steroid hormones in 40 obese girls aged 13–16 years (50% with PCOS participating in a 1-year lifestyle intervention. Girls with and without PCOS were matched to age, BMI and change of weight status. Methods: We measured progesterone, 17-hydroxyprogesterone, 17-hydroxyprogenolon, 11-deoxycorticosterone, 21-deoxycorticosterone, deoxycorticosterone, corticosterone, 11-deoxycortisol, cortisol, cortisone, androstenedione, testosterone, dehydroepiandrostendione-sulfate (DHEA-S, estrone and estradiol by LC–MS/MS steroid profiling at baseline and one year later. Results: At baseline, obese PCOS girls demonstrated significantly higher androstenedione and testosterone concentrations compared to obese girls without PCOS, whereas the other steroid hormones including glucocorticoids, mineralocorticoids, estrogens and precursors of androgens did not differ significantly. Weight loss in obese PCOS girls was associated with a significant decrease of testosterone, androstenedione, DHEA-S, cortisol and corticosterone concentrations. Weight loss in obese non-PCOS girls was associated with a significant decrease of DHEA-S, cortisol and corticosterone concentrations, whereas no significant changes of testosterone and androstenedione concentrations could be observed. Without weight loss, no significant changes of steroid hormones were measured except an increase of estradiol in obese PCOS girls without weight loss. Conclusions: The key steroid hormones in obese adolescents with PCOS are androstenedione and testosterone, whereas glucocorticoids, mineralocorticoids, estrogens and precursors of androgens did not differ between obese girls with and without PCOS.

Bacterioplankton features and its relations with doc characteristics and other limnological variables in Paraná river floodplain environments (PR/MS-Brazil).

Science.gov (United States)

Teixeira, Mariana Carolina; Santana, Natália Fernanda; de Azevedo, Júlio César Rodrigues; Pagioro, Thomaz Aurélio

2011-07-01

Since the introduction of the Microbial Loop concept, many studies aimed to explain the role of bacterioplankton and dissolved organic carbon (DOC) in aquatic ecosystems. Paraná River floodplain system is a very complex environment where these subjects were little explored. The aim of this work was to characterize bacterial community in terms of density, biomass and biovolume in some water bodies of this floodplain and to verify its temporal variation and its relation with some limnological variables, including some indicators of DOC quality, obtained through Ultraviolet-visible (UV-VIS) and fluorescence spectroscopic analysis. Bacterial density, biomass and biovolume are similar to those from other freshwater environments and both density and biomass were higher in the period with less rain. The limnological and spectroscopic features that showed any relation with bacterioplankton were the concentrations of N-NH4 and P-PO4, water transparency, and some indicators of DOC quality and origin. The analysis of these relations showed a possible competition between bacterioplankton and phytoplankton for inorganic nutrients and that the DOC used by bacterioplankton is labile and probably from aquatic macrophytes.

An Alternative to EPA Method 9 -- Field Validation of the Digital Opacity Compliance System (DOCS)

National Research Council Canada - National Science Library

Rasmussen, Steve L; Stone, Daniel A

2005-01-01

The Digital Opacity Compliance System (DOCS) software translates images from a commercial digital camera into visual plume opacity measurements, and is proposed as an alternate reporting method to EPA Method 9...

A study on plasma estradiol and progesterone profile at days 11, 12 and 13 post ovulation undergone embryo transfer at day 7-post ovulation in local Egyptian mares

Directory of Open Access Journals (Sweden)

Khalid Mohammed Karam

2017-07-01

Full Text Available This study was conducted on 28 recipient local mares after synchronizing and recovery of embryos of Arabian mares (donor mares and transferring them to recipients on day 7 post ovulation, all mares were raised in the studs of police academy –Cairo Egypt under same circumstances in the breeding season from February till may of 2013. Seventeen recipient mares were pregnant and 9 mares were non pregnant when ultrasound pregnancy check was done on day 21 post ovulation, blood samples were taken on days 11,12 and 13 to detect the steroidal hormonal profile (estrogen and progesterone via Elisa technique of the recipient mares plasma steroid level and its role in early pregnancy and maternal recognition. The results were significantly higher (P≤0.05 between pregnant (n=17 and non-pregnant (n=9 recipient mares in the plasma progesterone concentrations which were 10.99±0.16 vs 9.59±0.11, 12.69±0.16 vs 11.79±0.22 and 14.4±0.15 vs 13.78±0.23 ng/ml on days 11,12 and 13 post ovulation respectively, significant difference(P≤0.05 was observed when comparison between pregnant mare’s plasma progesterone concentrations on days 11,12 and 13 post ovulation. Plasma estrogen concentration were significantly higher (P≤0.05 in non-pregnant and pregnant mares which were15.17±0.18 vs 14.84±0.14, 14.74±0.27 vs13.94±0.12 and 14.14±0.3 vs13.12±0.16 pg/ ml on days 11,12 and respectively, on the other hand when comparison between days11,12 and 13 plasma estrogen levels were significantly different (P≤0.05 in pregnant mares while no significant difference was found in the same days between non pregnant mares, thus might be the main reason for early embryonic death when detected in early pregnancy check via ultrasonography in 21 days post ovulation.

{sup 11}C-ORM-13070, a novel PET ligand for brain α{sub 2C}-adrenoceptors: radiometabolism, plasma pharmacokinetics, whole-body distribution and radiation dosimetry in healthy men

Energy Technology Data Exchange (ETDEWEB)

Luoto, Pauliina; Oikonen, Vesa; Arponen, Eveliina; Helin, Semi; Virta, Jere; Virtanen, Kirsi; Roivainen, Anne [University of Turku and Turku University Hospital, Turku PET Centre, Turku (Finland); Suilamo, Sami [University of Turku and Turku University Hospital, Turku PET Centre, Turku (Finland); Turku University Hospital, Department of Oncology and Radiotherapy, Turku (Finland); Herttuainen, Jukka; Hietamaeki, Johanna; Holopainen, Aila; Rouru, Juha; Sallinen, Jukka [Orion Pharma, Espoo and Turku (Finland); Kailajaervi, Marita [GE Healthcare, Turku Imanet, Turku (Finland); Peltonen, Juha M.; Scheinin, Mika; Volanen, Iina [University of Turku, CRST, Turku (Finland); Rinne, Juha O. [University of Turku and Turku University Hospital, Turku PET Centre, Turku (Finland); University of Turku, CRST, Turku (Finland); TYKSLAB, Unit of Clinical Pharmacology, Turku (Finland); University of Turku and Turku University Hospital, Division of Clinical Neurosciences, Turku (Finland)

2014-10-15

{sup 11}C-labelled 1-[(S)-1-(2,3-dihydrobenzo[1,2]dioxin-2-yl)methyl] -4-(3-methoxy-methylpyridin-2- yl)-piperazine ({sup 11}C-ORM-13070) is a novel PET tracer for imaging of α{sub 2C}-adrenoceptors in the human brain. Brain α{sub 2C}-adrenoceptors may be therapeutic targets in several neuropsychiatric disorders, including depression, schizophrenia and Alzheimer's disease. To validate the use of {sup 11}C-ORM-13070 in humans, we investigated its radiometabolism, pharmacokinetics, whole-body distribution and radiation dose. Radiometabolism was studied in a test-retest setting in six healthy men. After intravenous injection of {sup 11}C-ORM-13070, blood samples were drawn over 60 min. Plasma samples were analysed by radio-HPLC for intact tracer and its radioactive metabolites. Metabolite-corrected plasma time-activity curves were used for calculation of pharmacokinetics. In a separate group of 12 healthy men, the whole-body distribution of {sup 11}C-ORM-13070 and radiation exposure were investigated by dynamic PET/CT imaging without blood sampling. Two radioactive metabolites of {sup 11}C-ORM-13070 were detected in human arterial plasma. The proportion of unchanged {sup 11}C-ORM-13070 decreased from 81 ± 4 % of total radioactivity at 4 min after tracer injection to 23 ± 4 % at 60 min. At least one of the radioactive metabolites penetrated into red blood cells, while the parent tracer remained in plasma. The apparent elimination rate constant and corresponding half-life of unchanged {sup 11}C-ORM-13070 in arterial plasma were 0.0117 ± 0.0056 min{sup -1} and 73.6 ± 35.8 min, respectively. The organs with the highest absorbed doses were the liver (12 μSv/MBq), gallbladder wall (12 μSv/MBq) and pancreas (9.1 μSv/MBq). The mean effective dose was 3.9 μSv/MBq, with a range of 3.6 - 4.2 μSv/MBq. {sup 11}C-ORM-13070 was rapidly metabolized in human subjects after intravenous injection. The effective radiation dose of {sup 11}C-ORM-13070 was in the same range

Final IAEA research coordination meeting on plasma-interaction induced erosion of fusion reactor materials. October 9-11, 1995, Vienna, Austria. Summary report

International Nuclear Information System (INIS)

Langley, R.A.

1995-12-01

The proceedings and results of the Final IAEA Research Coordination Meeting on ''Plasma-interaction Induced Erosion of Fusion Reactor Materials'' held on October 9, 10 and 11, 1995 at the IAEA Headquarters in Vienna are briefly described. This report includes a summary of presentations made by the meeting participants, the results of a data survey and needs assessment for the erosion of plasma facing components and in-vessel materials, and recommendations regarding future work. (author). Refs, figs, tabs

Exploring the Roles of Google.doc and Peer e-Tutors in English Writing

Science.gov (United States)

Lin, Wen-Chuan; Yang, Shu Ching

2013-01-01

This study explored college students' experiences with and perceptions of integrating both the Google.doc and peer e-tutors into an English writing course. This socio-cultural study employed online collaborative learning mechanisms with an attempt to develop students' English writing skills and motivation over the course of one year. Participants…

The steroid metabolite 16(β)-OH-androstenedione generated by CYP21A2 serves as a substrate for CYP19A1.

Science.gov (United States)

Neunzig, J; Milhim, M; Schiffer, L; Khatri, Y; Zapp, J; Sánchez-Guijo, A; Hartmann, M F; Wudy, S A; Bernhardt, R

2017-03-01

The 21-hydroxylase (CYP21A2) is a steroidogenic enzyme crucial for the synthesis of mineralo- and glucocorticoids. It is described to convert progesterone as well as 17-OH-progesterone, through a hydroxylation at position C21, into 11-deoxycorticosterone (DOC) and 11-deoxycortisol (RSS), respectively. In this study we unraveled CYP21A2 to have a broader steroid substrate spectrum than assumed. Utilizing a reconstituted in vitro system, consisting of purified human CYP21A2 and human cytochrome P450 reductase (CPR) we demonstrated that CYP21A2 is capable to metabolize DOC, RSS, androstenedione (A4) and testosterone (T). In addition, the conversion of A4 rendered a product whose structure was elucidated through NMR spectroscopy, showing a hydroxylation at position C16-beta. The androgenic properties of this steroid metabolite, 16(β)-OH-androstenedione (16bOHA4), were investigated and compared with A4. Both steroid metabolites were shown to be weak agonists for the human androgen receptor. Moreover, the interaction of 16bOHA4 with the aromatase (CYP19A1) was compared to that of A4, indicating that the C16 hydroxyl group does not influence the binding with CYP19A1. In contrast, the elucidation of the kinetic parameters showed an increased K m and decreased k cat value resulting in a 2-fold decreased catalytic efficiency compared to A4. These findings were in accordance with our docking studies, revealing a similar binding conformation and distance to the heme iron of both steroids. Furthermore, the product of 16bOHA4, presumably 16-hydroxy-estrone (16bOHE1), was investigated with regard to its estrogenic activity, which was negligible compared to estradiol and estrone. Finally, 16bOHA4 was found to be present in a patient with 11-hydroxylase deficiency and in a patient with an endocrine tumor. Taken together, this study provides novel information on the steroid hormone biosynthesis and presents a new method to detect further potential relevant novel steroid metabolites

Modeling the Space-Time Destiny of Pan-Arctic Permafrost DOC in a Global Land Surface Model: Feedback Implications

Science.gov (United States)

Bowring, S.; Lauerwald, R.; Guenet, B.; Zhu, D.; Ciais, P.

2017-12-01

Most global climate models do not represent the unique permafrost soil environment and its respective processes. This significantly contributes to uncertainty in estimating their responses, and that of the planet at large, to warming. Here, the production, transport and atmospheric release of dissolved organic carbon (DOC) from high-latitude permafrost soils into inland waters and the ocean is explicitly represented for the first time in the land surface component (ORCHIDEE-MICT) of a CMIP6 global climate model (IPSL). This work merges two models that are able to mechanistically simulate complex processes for 1) snow, ice and soil phenomena in high latitude environments, and 2) DOC production and lateral transport through soils and the river network, respectively, at 0.5° to 2° resolution. The resulting model is subjected to a wide range of input forcing data, parameter testing and contentious feedback phenomena, including microbial heat generation as the active layer deepens. We present results for the present and future Pan-Arctic and Eurasia, with a focus on the Lena and Mackenzie River basins, and show that soil DOC concentrations, their riverine transport and atmospheric evasion are reasonably well represented as compared to observed stocks, fluxes and seasonality. We show that most basins exhibit large increases in DOC transport and riverine CO2 evasion across the suite of RCP scenarios to 2100. We also show that model output is strongly influenced by choice of input forcing data. The riverine component of what is known as the `boundless carbon cycle' is little-recognized in global climate modeling. Hydrological mobilization to the river network results either in sedimentary settling or atmospheric `evasion', presently amounting to 0.5-1.8 PgC yr-1. Our work aims at filling in these knowledge gaps, and the response of these DOC-related processes to thermal forcing. Potential feedbacks owing to such a response are of particular relevance, given the magnitude

Effects of gamma-sterilization on DOC, uranium and arsenic remobilization from organic and microbial rich stream sediments

International Nuclear Information System (INIS)

Schaller, Joerg; Weiske, Arndt; Dudel, E. Gert

2011-01-01

Organic-rich sediments are known to be effective accumulators for uranium and arsenic. Much is known about the capacity for metal or metalloid fixation by microbes and organic compounds as well as inorganic sediment particles. Experiments investigating the effect of microbes on the process of metal fixation in sediments require sterilized sediments as control treatment which is often realized by gamma-sterilization. Only few studies show that gamma-sterilization has an effect on the remobilization of metal and metalloids and on their physico-chemical properties. These studies deal with sediments with negligible organic content whereas almost nothing is known about organic-rich sediments including a probably high microbial activity. In view of this, we investigated the effect of gamma-sterilization of organic-rich sediments on uranium and arsenic fixation and release. After ten days within an exposure experiment we found a significant higher remobilization of uranium and arsenic in sterile compared to unsterile treatments. In line with these findings the content of dissolved organic carbon (DOC), manganese, and iron increased to even significantly higher concentration in the sterile compared to unsterile treatment. Gamma-sterilization seems to change the physico-chemical properties of organic-rich sediments. Microbial activity is effectively eliminated. From increased DOC concentrations in overlaying water it is concluded that microbes are eventually killed with leaching of cellular compounds in the overlaying water. This decreases the adsorption capacity of the sediment and leads to enhanced uranium and arsenic remobilization. - Research highlight s : →Remobilization of uranium and arsenic is higher in gamma-sterile treatments. →DOC mobilization is also higher in sterilized treatment. →Adsorption capacity in sediments is reduced by release of DOC.

A prospect at 11th international Toki conference. Plasma physics, quo vadis?

International Nuclear Information System (INIS)

Itoh, Kimitaka

2001-01-01

A prospect of plasma physics at the turn of next century is discussed. The theme of this conference identifies the future direction of the research related with plasmas. Main issue is the potential and structure formation in plasmas; More specifically, structures which are realized through the interaction of electromagnetic fields, in particular that with electric fields, in non-equilibrium state. An emphasis is made to clarify the fundamental physics aspects of the plasma physics in fusion research as well as that in the basic research of plasmas. The plasma physics will give an important contribution to the solution of the historical enigma, i.e., all things flow. Having an impact on human recognition of nature and showing a beauty in a law, the plasma physics/science will demonstrate to be a leading science in the 21st century. (author)

Optimization and validation of bioanalytical SPE – HPLC method for the simultaneous determination of carbamazepine and its main metabolite, carbamazepine-10, 11-epoxide, in plasma

Directory of Open Access Journals (Sweden)

Jasmina Tonic – Ribarska

2012-03-01

Full Text Available Carbamazepine is widely used as an antiepileptic drug in the treatment of partial and generalized tonic-clonic seizures. Carbamazepine 10,11-epoxide is the most important metabolite of carbamazepine, because it is a pharmacologically active compound with anticonvulsant properties. According to that, the routine analysis of carbamazepine 10,11-epoxide along with carbamazepine may provide optimal therapeutic monitoring of carbamazepine treatment. The aim of this study was to optimize and validate a simple and reliable solid - phase extraction method followed by RP-HPLC for the simultaneous determination of plasma levels of carbamazepine and carbamazepine-10,11-epoxide, in order to assure the implementation of the method for therapeutic monitoring. The extraction of the analytes from the plasma samples was performed by means of a solid-phase extraction procedure. The separation was carried out on a reversed-phase column using isocratic elution with acetonitrile and water (35:65, v/v as a mobile phase. The temperature was 30°C and UV detection was set at 220 nm. The extraction yield values were more than 98% for all analytes, measured at four concentration levels of the linear concentration range. The method displayed excellent selectivity, sensitivity, linearity, precision and accuracy. Stability studies indicate that stock solutions and plasma samples were stabile under different storage conditions at least during the observed period. The method was successfully applied to determine the carbamazepine and carbamazepine-10,11-epoxide in plasma of epileptic patients treated with carbamazepine as monotherapy and in polytherapy. In conclusion, the proposed method is suitable for application in therapeutic drug monitoring of epileptic patients undergoing treatment with carbamazepine.

Bacterioplankton features and its relations with doc characteristics and other limnological variables in Paraná river floodplain environments (PR/MS-Brazil

Directory of Open Access Journals (Sweden)

Mariana Carolina Teixeira

2011-09-01

Full Text Available Since the introduction of the Microbial Loop concept, many studies aimed to explain the role of bacterioplankton and dissolved organic carbon (DOC in aquatic ecosystems. Paraná River floodplain system is a very complex environment where these subjects were little explored. The aim of this work was to characterize bacterial community in terms of density, biomass and biovolume in some water bodies of this floodplain and to verify its temporal variation and its relation with some limnological variables, including some indicators of DOC quality, obtained through Ultraviolet-visible (UV-VIS and fluorescence spectroscopic analysis. Bacterial density, biomass and biovolume are similar to those from other freshwater environments and both density and biomass were higher in the period with less rain. The limnological and spectroscopic features that showed any relation with bacterioplankton were the concentrations of N-NH4 and P-PO4, water transparency, and some indicators of DOC quality and origin. The analysis of these relations showed a possible competition between bacterioplankton and phytoplankton for inorganic nutrients and that the DOC used by bacterioplankton is labile and probably from aquatic macrophytes.

P-type doping of semipolar GaN(11 anti 22) by plasma-assisted molecular-beam epitaxy

Energy Technology Data Exchange (ETDEWEB)

Das, A.; Lahourcade, L. [Equipe Mixte CEA-CNRS, Nanophysique et Semiconducteurs, CEA-Grenoble, INAC/SP2M, Grenoble (France); Pernot, J. [Institut Neel, CNRS et Universite Joseph Fourier, Grenoble (France); Valdueza-Felip, S. [Equipe Mixte CEA-CNRS, Nanophysique et Semiconducteurs, CEA-Grenoble, INAC/SP2M, Grenoble (France); Dept. Electronica, Escuela Politecnica, Universidad de Alcala, Alcala de Henares, Madrid (Spain); Ruterana, P. [CIMAP, UMR6252, CNRS-ENSICAEN-CEA-UCBN, Caen (France); Laufer, A.; Eickhoff, M. [I. Physikalisches Institut, Justus-Liebig-Universitaet Giessen (Germany); Monroy, E.

2010-07-15

We report the effect of Mg doping on the growth kinetics of semipolar GaN(11-22) synthesized by plasma-assisted molecular-beam epitaxy. Mg tends to segregate on the surface, inhibiting the formation of the self-regulated Ga film which is used as a surfactant for the growth of undoped and Si-doped GaN(11-22). As a result, the growth widow is reduced for Mg doped layers, and we observe a certain deterioration of the surface morphology. In spite of this difficulties, homogenous Mg incorporation is achieved and layers display p -type conductivity for Mg atomic concentration higher than 7 x 10{sup 18} cm{sup -3}. Microscopy studies show no evidence of the pyramidal defects or polarity inversion domains found in Mg-doped GaN(0001). (copyright 2010 WILEY-VCH Verlag GmbH and Co. KGaA, Weinheim) (orig.)

Role of 11. beta. -hydroxyprogesterone in biosynthesis of corticosterone from progesterone in guinea pig adrenals

Energy Technology Data Exchange (ETDEWEB)

Yudaev, N A; Afinogenova, S A [Institute of Experimental Endocrinology and Hormone Chemistry, Moscow (USSR)

1975-06-01

Slices of male guinea pig adrenals were incubated with a trace amount of /sup 3/H-7..cap alpha..-progesterone and the proportion of /sup 3/H incorporation various steroids at various intervals was measured. It was found that /sup 3/H accumulated predominantly in 11..beta..-hydroxyprogesterone as compared to DOC. This indicated that in guinea pig adrenals 11..beta..-hydroxyprogesterone plays a predominant role in the formation of corticosterone from progesterone. The observed sequence of changes in progesterone label accumulation in 17-hydroxycompounds indicated the pathway of cortisol synthesis through the intermediate formation of 17-hydroxyprogesterone and 11-deoxycortisol.

11th International Conference on Numerical Modeling of Space Plasma Flows: ASTRONUM-2016

International Nuclear Information System (INIS)

2017-01-01

PREFACEThe Center for Space Plasma and Aeronomic Research (CSPAR) at the University of Alabama in Huntsville (UAH) and Maison de la Simulation at the French Alternative Energies and Atomic Energy Commission (Commissariat a l’energie atomique et aux energies alternatives, CEA) organized the 11th annual International Conference on Numerical Modeling of Space Plasma Flows (ASTRONUM-2016) on June 6—10, 2016 in Monterey, California, USA.The Program Committee consisted of Tahar Amari (CNRS Ecole Polytechnique, France), Edouard Audit (CEA/CNRS Maison de la Simulation, Gif-sur-Yvette, France, co-chair), Amitava Bhattacharjee (Princeton University, USA), Phillip Colella (Lawrence Berkeley National Laboratory, USA), Anthony Mezzacappa (University of Tennessee, Knoxville, USA), Ewald Müller (Max-Planck-Institute for Astrophysics, Garching, Germany), Nikolai Pogorelov (University of Alabama in Huntsville/CSPAR, USA, chair), Kazunari Shibata (Kyoto University, Japan), James Stone (Princeton University, USA), Jon Linker (Predictive Science, Inc., USA), and Gary P. Zank (University of Alabama in Huntsville, USA).The conference attracted 92 scientists representing different branches of the plasma simulation community. The distinctive feature of this conference is a combination of diverse research topics, all of which are essential for performing high-resolution, continuum mechanics and particle, simulations of physical phenomena in space physics and astrophysics. Among such topics were software packages for modeling and analyzing plasma flows; advanced numerical methods for space and astrophysical flows; large-scale fluid-based, kinetic, and hybrid simulations; turbulence and cosmic ray transport; and magnetohydrodynamics. The applications discussed included cosmology and galaxy formation, supernova explosions, physics of the Sun-heliosphere-magnetosphere environments, the interstellar medium and star formation, stellar physics, experimental plasma physics, astrophysical

Variable relationships of DOC with oxygen in the northwestern Indian Ocean and their ecological implications

Digital Repository Service at National Institute of Oceanography (India)

Rajendran, A.; DileepKumar, M.; Ramaiah, N.; Ittekkot, V.; Desai, B.N.

characterizEd. by the reducing environment, is found to outflux CO sub(2) much faster than the other regions. Considering the latitudinally variable relationships of DOC with oxidants, its different transport pathyways in the water column are discussed...

Clinical characteristics of high plasma adiponectin and high plasma leptin as risk factors for arterial stiffness and related end-organ damage.

Science.gov (United States)

Kohara, Katsuhiko; Ochi, Masayuki; Okada, Yoko; Yamashita, Taiji; Ohara, Maya; Kato, Takeaki; Nagai, Tokihisa; Tabara, Yasuharu; Igase, Michiya; Miki, Tetsuro

2014-08-01

The relationship between plasma levels of adiponectin and cardiovascular events is inconclusive. We evaluated the clinical characteristics of people with high plasma adiponectin and high plasma leptin levels. Thousand seven hundred participants recruited from visitors to the Anti-Aging Doc were divided into four groups by combining the bipartiles of plasma adiponectin and leptin levels in men and women separately: AL, high adiponectin and high leptin; Al, high adiponectin and low leptin; al, low adiponectin and low leptin; aL, low adiponectin and high leptin. Body composition, including visceral fat area and thigh muscle cross-sectional area (CSA), brachial-ankle pulse wave velocity (baPWV), periventricular hyperintensity, and urinary albumin excretion, were determined. Twenty percent of the studied population fell within the AL group. This group had a significantly higher visceral fat area than the Al group. Thigh muscle CSA was lowest in the AL group among groups. baPWV, brain white matter lesions, and albuminuria findings in the AL group were significantly higher than those of the Al group. Multiple and logistic regression analyses with confounding parameters further confirmed that plasma adiponectin was not an independent determinant for brain and renal small vessel-related disease. These findings suggest that the plasma level of adiponectin alone is not enough for the risk stratification of cardiovascular disease. Leptin resistance associated with skeletal muscle loss in addition to obesity may need to be addressed to identify high risk people with high plasma adiponectin levels. Copyright © 2014 Elsevier Ireland Ltd. All rights reserved.

JCSC_129_11_1671_1676_SI.doc

Indian Academy of Sciences (India)

SUPPLEMENTARY INFORMATION. Preparation, characterization, and postsynthetic modification of layered MCM-22 zeolite precursor. RIDDHI THAKKARa and RAJIB BANDYOPADHYAY*, a. aSchool of Technology, Department of Science, Pandit Deendayal Petroleum University, Gandhinagar 382 007, Gujarat, India.

JCSC_128_11_1775_1782_SI.doc

Indian Academy of Sciences (India)

ABHRANIL DEa, DHANANJAY DEYa, HARE RAM YADAVb, MILAN MAJIc, VINAYAK RANEd, R M KADAMd, ANGSHUMAN ROY CHOUDHURYb and BHASKAR BISWAS*, a. aDepartment of Chemistry, Raghunathpur College, Purulia, West Bengal, 723 133 India. bDepartment of Chemical Sciences, Indian Institute of ...

Drainage in Shallow Peatlands of Marginal Upland Landscapes: DOC Losses from High Flow Events

Science.gov (United States)

Grand-Clement, E.; Anderson, K.; Luscombe, D.; Gatis, N.; Benaud, P.; Brazier, R.

2013-12-01

) and finally headwater catchment-scales. Flow monitoring has been in place at all scales since November 2010. Flow-proportional water samples were collected during a range of events throughout winter 2011 to 2013 and analysed for Dissolved Organic Carbon (DOC) and colour, as these variables were identified as critical, both in terms of carbon cycling and for costly water treatment that currently takes place downstream. DOC fluxes were examined temporarily and spatially in relation to season, drain sizes, and magnitude/frequency of event. First results show higher DOC concentrations during rain events occurring in the summer compared to winter times, due to generally drier conditions. DOC fluxes per 24h rain events reach up to 3g/m2. Such measurements are used to evaluate annual DOC losses at the scale of the whole catchment. This will help improving our understanding of carbon losses and fluxes in streams from damaged peatlands, and further estimate the impact on the supply of ecosystem services, and the potential for improvement that can be expected following restoration.

Occurrence and simulation of trihalomethanes in swimming pool water: A simple prediction method based on DOC and mass balance.

Science.gov (United States)

Peng, Di; Saravia, Florencia; Abbt-Braun, Gudrun; Horn, Harald

2016-01-01

Trihalomethanes (THM) are the most typical disinfection by-products (DBPs) found in public swimming pool water. DBPs are produced when organic and inorganic matter in water reacts with chemical disinfectants. The irregular contribution of substances from pool visitors and long contact time with disinfectant make the forecast of THM in pool water a challenge. In this work occurrence of THM in a public indoor swimming pool was investigated and correlated with the dissolved organic carbon (DOC). Daily sampling of pool water for 26 days showed a positive correlation between DOC and THM with a time delay of about two days, while THM and DOC didn't directly correlate with the number of visitors. Based on the results and mass-balance in the pool water, a simple simulation model for estimating THM concentration in indoor swimming pool water was proposed. Formation of THM from DOC, volatilization into air and elimination by pool water treatment were included in the simulation. Formation ratio of THM gained from laboratory analysis using native pool water and information from field study in an indoor swimming pool reduced the uncertainty of the simulation. The simulation was validated by measurements in the swimming pool for 50 days. The simulated results were in good compliance with measured results. This work provides a useful and simple method for predicting THM concentration and its accumulation trend for long term in indoor swimming pool water. Copyright © 2015 Elsevier Ltd. All rights reserved.

In Situ Stoichiometry in a Large River: Continuous Measurement of Doc, NO3 and PO4 in the Sacramento River

Science.gov (United States)

Downing, B. D.; Pellerin, B. A.; Bergamaschi, B. A.; Saraceno, J.

2011-12-01

Studying controls on geochemical processes in rivers and streams is difficult because concentration and composition often changes rapidly in response to physical and biological forcings. Understanding biogeochemical dynamics in rivers will improve current understanding of the role of watershed sources to carbon cycling, river and stream ecology, and loads to estuaries and oceans. Continuous measurements of dissolved organic carbon (DOC), nitrate (NO3-) and soluble reactive phosphate (SRP) concentrations are now possible, along with some information about DOC composition. In situ sensors designed to measure these constituents provide high frequency, real-time data that can elucidate hydrologic and biogeochemical controls which are difficult to detect using more traditional sampling approaches. Here we present a coupled approach, using in situ optical instrumentation with discharge measurements to provide quantitative estimates of constituent loads to investigate C, NO3- and SRP sources and processing in the Sacramento River, CA, USA. Continuous measurement of DOC concentration was conducted by use of a miniature in situ fluorometer (Turner Designs Cyclops) designed to measure chromophoric dissolved organic matter fluorescence (FDOM) over the course of an entire year. Nitrate was measured concurrently using a Satlantic SUNA and phosphate was measured using a WETLabs model Cycle-P instrument for a two week period in July 2011. Continuous measurement from these instruments paired with continuous measurement of physical water quality variables such as temperature, pH, specific conductance, dissolved oxygen, and turbidity, were used to investigate physical and chemical dynamics of DOC, NO3-, SRP over varying time scales. Deploying these instruments at pre-existing USGS discharge gages allowed for calculation of instantaneous and integrated constituent fluxes, as well as filling in gaps in our understanding biogeochemical processes and transport. Results from the study

Contributions to 30th European Physical Society conference on controlled fusion and plasma physics (St. Petersburg, Russia, 7-11 July 2003) from NIFS

International Nuclear Information System (INIS)

2003-08-01

25 contributed papers to the 30th European Physical Society Conference on Controlled Fusion and Plasma Physics (St. Petersburg, Russia, 7-11 July 2003) from the activity of NIFS are collected in this report. (author)

Optimization of magnetocaloric properties of arc-melted and spark plasma-sintered LaFe{sub 11.6}Si{sub 1.4}

Energy Technology Data Exchange (ETDEWEB)

Shamba, P.; Morley, N.A.; Reaney, I.M.; Rainforth, W.M. [University of Sheffield, Department of Materials Science and Engineering, Sheffield (United Kingdom); Cespedes, O. [University of Leeds, School of Physics and Astronomy, Leeds (United Kingdom)

2016-08-15

LaFe{sub 11.6}Si{sub 1.4} alloy has been synthesized in polycrystalline form using both arc melting and spark plasma sintering (SPS). The phase formation, hysteresis loss and magnetocaloric properties of the LaFe{sub 11.6}Si{sub 1.4} alloys synthesized using the two different techniques are compared. The annealing time required to obtain the 1:13 phase is significantly reduced from 14 days (using the arc melting technique) to 30 min (using the SPS technique). The magnetic entropy change (ΔS{sub M}) for the arc-melted LaFe{sub 11.6}Si{sub 1.4} compound, obtained for a field change of 5 - 0T (decreasing field), was estimated to be 19.6 J kg{sup -1} K{sup -1}. The effective RCP at 5T of the arc-melted LaFe{sub 11.6}Si{sub 1.4} compound was determined to be 360 J kg{sup -1} which corresponds to about 88 % of that observed in Gd. A significant reduction in the hysteretic losses in the SPS LaFe{sub 11.6}Si{sub 1.4} compound was observed. The ΔS{sub M}, obtained for a field change of 5 - 0T (decreasing field), for the SPS LaFe{sub 11.6}Si{sub 1.4} compound decreases to 7.4 J kg{sup -1} K{sup -1}. The T{sub C} also shifts from 186 (arc-melted) to 230 K (SPS) and shifts the order of phase transition from first to second order, respectively. The MCE of the SPS LaFe{sub 11.6}Si{sub 1.4} compound spreads over a larger temperature range with the RCP value at 5T reaching 288 J kg{sup -1} corresponding to about 70 % of that observed in Gd. At low fields, the effective RCP values of the arc-melted and spark plasma-sintered LaFe{sub 11.6}Si{sub 1.4} compounds are comparable, thereby clearly demonstrating the potential of SPS LaFe{sub 11.6}Si{sub 1.4} compounds in low-field magnetic refrigeration applications. (orig.)

A Mixed Methods Analysis of the Effect of Google Docs Environment on EFL Learners' Writing Performance and Causal Attributions for Success and Failure

Science.gov (United States)

Seyyedrezaie, Zari Sadat; Ghonsooly, Behzad; Shahriari, Hesamoddin; Fatemi, Hazar Hosseini

2016-01-01

This study investigated the effect of writing process in Google Docs environment on Iranian EFL learners' writing performance. It also examined students' perceptions towards the effects of Google Docs and their perceived causes of success or failure in writing performance. In this regard, 48 EFL students were chosen based on their IELTs writing…

Granulocyte and monocyte CD11b expression during plasma separation is dependent on complement factor 5 (C5) - an ex vivo study with blood from a C5-deficient individual.

Science.gov (United States)

Hardersen, Randolf; Enebakk, Terje; Christiansen, Dorte; Bergseth, Grethe; Brekke, Ole-Lars; Mollnes, Tom Eirik; Lappegård, Knut Tore; Hovland, Anders

2018-04-01

The aim of the study was to investigate the role of complement factor 5 (C5) in reactions elicited by plasma separation using blood from a C5-deficient (C5D) individual, comparing it to C5-deficient blood reconstituted with C5 (C5DR) and blood from healthy donors. Blood was circulated through an ex vivo plasma separation model. Leukocyte CD11b expression and leukocyte-platelet conjugates were measured by flow cytometry during a 30-min period. Other markers were assessed during a 240-min period. Granulocyte and monocyte CD11b expression did not increase in C5D blood during plasma separation. In C5DR samples granulocytes CD11b expression, measured by mean fluorescence intensity (MFI), increased from 10481 ± 6022 (SD) to 62703 ± 4936, and monocytes CD11b expression changed from 13837 ± 7047 to 40063 ± 713. Granulocyte-platelet conjugates showed a 2.5-fold increase in the C5DR sample compared to the C5D sample. Monocyte-platelet conjugates increased independently of C5. In the C5D samples, platelet count decreased from 210 × 10 9 /L (201-219) (median and range) to 51 × 10 9 /L (50-51), and C3bc increased from 14 CAU/mL (21-7) to 198 CAU/mL (127-269), whereas TCC formation was blocked during plasma separation. In conclusion, up-regulation of granulocyte and monocyte CD11b during plasma separation was C5-dependent. The results also indicate C5 dependency in granulocyte-platelet conjugates formation. © 2018 APMIS. Published by John Wiley & Sons Ltd.

Google Docs: an experience in collaborative work in the University

Directory of Open Access Journals (Sweden)

Vanesa DELGADO BENITO

2013-01-01

Full Text Available The educational environment contains multiple reasons to make use of the new possibilities that Information and Communication Technologies (ICT as an educational resource offer. The educational experience presented here has been realized in the subject of New Technologies applied to Education, which forms part of the study plans for primary school teachers in the University of Burgos (UBU, and which has as its main goal to facilitate the acquisition of generic competences of ICT to work online. To reach this proposed goal, we have cultivated active learning of the students, from individual to collective learning. At first, they were given a text to work individually, to read and review. After that, groups were created to work on the document cooperatively, online, through the use of the office tool Google Docs. After sharing and editing the document, every group made a multimedia presentation in which all of their contributions are bundled. Finally, all of the presentations made by every one of the groups were made public. When the practical part of the course was done, the students answered a short questionnaire in which they were asked about their initial knowledge, and the level of dominion and didactic usefulness of the tool Google Docs. It is worth noting that 75% of the class did not know the application before the course and that, after using it, 92% say they would use it in the educational and professional future. This educational experience has been very satisfactory for students and professors alike.

Application of a UV-Vis submersible probe for capturing changes in DOC concentrations across a mire complex during the snowmelt and summer periods

Science.gov (United States)

Avagyan, Armine; Runkle, Benjamin; Kutzbach, Lars

2013-04-01

An accurate quantification of dissolved organic carbon (DOC) is crucial for understanding changes in water resources under the influence of climate, land use and urbanization. However, the conventionally used methods do not allow high frequency in situ analyses in remote or hostile environments (e.g., industrial wastewater or during environmental high-flow events, such as snowmelt or floods). In particular, missing measurements during the snowmelt period in landscapes of the boreal region can lead to significant miscalculations in regional carbon budgets. Therefore, the aim of the study was to test the performance of a portable, submersible UV-Vis spectrophotometer (spectro::lyser, s::can Messtechnik GmbH, Austria) during the snowmelt period in a boreal mire-forest catchment, and to provide a conceptual understanding of the spatial and temporal dynamics of DOC concentrations during and after snowmelt. During 2011, water samples were collected from the near-pristine Ust-Pojeg mire complex in northwestern Russia (61° 56'N, 50° 13'E). Sampling started during the spring snowmelt period and continued until late fall. The mire presented a mosaic of different landscape units. The mire consisted of minerogeous (fen), ombrogenous (bog), and transitional forest-mire (lagg) zones. Water samples were taken from the surface across the mire (22 points at 50-m intervals). DOC concentrations were analyzed directly at the study site using a portable, submersible UV-Vis spectrophotometer, which uses high-resolution absorbance measurements over the wavelength range 200-742.5 nm at 2.5-nm intervals as a proxy for DOC content. Because the DOC composition of fluids varies by site, a local calibration replaced the default settings of the spectro::lyser (Global Calibration) to enhance the accuracy of the measurements. To evaluate the local calibration and correct for drift, the same samples (n = 157) were additionally analyzed using the wet persulfate oxidation method (O

eDOC: A collaboration infrastructure to manage knowledge and information on nuclear projects and research activities

International Nuclear Information System (INIS)

Van Craeynest, J.M.; Jacquemet, F.; Chermette, D.; Bonneau, S.

2004-01-01

After a brief recall of Knowledge Management issues and of the MKSM knowledge modelling method developed and used by the CEA, this paper focuses on the eDOC web collaboration platform designed to support a large range of cross-collaboration needs and a large spectrum of community types (from small units to large European Networks of Excellence). Online community members have different needs : knowing other members and their roles, accessing to reference information and documents, reviewing, annotating and publishing documents or sending information to all or part of members, being informed of events, scheduling shared jobs and manage tasks, discuss some questions using forums, etc. They also want to develop a common identity and portal look and structure customizations are very useful for that purpose. The Information System Department of the CEA has launched the eDOC project to supply a rapid demand growth for those tools. In the CEA, this demand is due to the growing importance and number of internal and external cross-collaborations and alliances with industrial and research partners. After a systematic evaluation campaign of both proprietary and open-source solutions, and after having defined the most pragmatic deployment strategy, we have chosen the Collaborative Portal Server (CPS) edited by Nuxeo. CPS is based on the Zope open-source object-oriented application server. Then we invested to improve functionalities and performances of CPS but also to design and implement a security policy adapted to different types of security requirements and information privacy levels. The eDOC web collaboration infrastructure is now used by 50 projects and this number keeps increasing. The main uses are internal documents repositories (to simplify classical 'Intranet' building and maintaining process) and information repositories (including documents but also events, news, calendar, conferences, etc.) for external collaborations. The 6th European research framework program

eLearning to enhance physician patient communication: a pilot test of "doc.com" and "WebEncounter" in teaching bad news delivery.

Science.gov (United States)

Daetwyler, Christof J; Cohen, Diane G; Gracely, Edward; Novack, Dennis H

2010-01-01

Physician-patient communication skills help determine the nature and quality of diagnostic information elicited from patients, the quality of the physician's counseling, and the patient's adherence to treatment. In spite of their importance, surveys have demonstrated a wide variability and deficiencies in the teaching of these skills. Describe two specific methodologies for teaching physician-patient communication skills developed at our institution and pilot test them for effectiveness. Between 2004 and 2009 we developed "doc.com," a series of 41 media-rich online modules on all aspects of healthcare communication jointly with the American Academy on Communication in Healthcare. Starting in 2006, we expanded our pre-existing experience with the videoconferencing system "WebOSCE" into the online application "WebEncounter." This new methodology combines practice of communication skills on standardized patients with structured assessment and constructive feedback. We had three randomized groups: controls who did only the assessment parts of a WebOSCE on two occasions, a doc.com group who had doc.com in between the assessment occasions, and a combined group that had both doc.com and a WebEncounter between assessments. We found significant improvement in skills as components were added, and the training program was well received.

Spatial distribution and mobility of organic carbon (POC and DOC) in a coastal Mediterranean environment (Saronikos Gulf, Greece) during 2007-2009 period.

Science.gov (United States)

Evangeliou, Nikolaos; Florou, Heleny

2013-08-01

Particulate (POC) and dissolved organic carbon (DOC) is an important parameter for the pollution assessment of coastal marine systems, especially those affected by anthropogenic, domestic, and industrial activities. In the present paper, a similar marine system (Saronikos Gulf) located in the west-central Aegean Sea (eastern Mediterranean Sea) was examined, in terms of the temporal and spatial distribution of organic carbon (POC and DOC), with respect to marine sources and pathways. POC was maximum in winter in the Saronikos Gulf, due to the bloom of phytoplankton, whereas in the Elefsis Bay (located in the north side of the Saronikos Gulf) in summer, since phytoplankton grazes in the Bay in the end of summer (except for winter). Approximately 60 % of the bulk DOC of the water column was estimated as non-refractory (labile and semi-labile), due to the major anthropogenic, domestic, and industrial effects of the region and the shallow depths. The spatial distribution of POC and DOC mainly affects the northeastern section of the Gulf, since that region has been accepted major organic discharges for a long time period, in connection to the relatively long renewal times of its waters.

An Atmospheric Pressure Chemical Ionization MS/MS Assay Using Online Extraction for the Analysis of 11 Cannabinoids and Metabolites in Human Plasma and Urine.

Science.gov (United States)

Klawitter, Jelena; Sempio, Cristina; Mörlein, Sophie; De Bloois, Erik; Klepacki, Jacek; Henthorn, Thomas; Leehey, Maureen A; Hoffenberg, Edward J; Knupp, Kelly; Wang, George S; Hopfer, Christian; Kinney, Greg; Bowler, Russell; Foreman, Nicholas; Galinkin, Jeffrey; Christians, Uwe; Klawitter, Jost

2017-10-01

Although, especially in the United States, there has been a recent surge of legalized cannabis for either recreational or medicinal purposes, surprisingly little is known about clinical dose-response relationships, pharmacodynamic and toxicodynamic effects of cannabinoids such as Δ9-tetrahydrocannabinol (THC). Even less is known about other active cannabinoids. To address this knowledge gap, an online extraction, high-performance liquid chromatography coupled with tandem mass spectrometry method for simultaneous quantification of 11 cannabinoids and metabolites including THC, 11-hydroxy-Δ9-tetrahydrocannabinol, 11-nor-Δ9-tetrahydrocannabinol-9-carboxylic acid, 11-nor-Δ9-tetrahydrocannabinol-9-carboxylic acid glucuronide (THC-C-gluc), cannabinol, cannabidiol, cannabigerol, cannabidivarin, Δ9-tetrahydrocannabivarin (THCV), and 11-nor-9-carboxy-Δ9-tetrahydrocannabivarin (THCV-COOH) was developed and validated in human urine and plasma. In contrast to atmospheric pressure chemical ionization, electrospray ionization was associated with extensive ion suppression in plasma and urine samples. Thus, the atmospheric pressure chemical ionization assay was validated showing a lower limit of quantification ranging from 0.39 to 3.91 ng/mL depending on study compound and matrix. The upper limit of quantification was 400 ng/mL except for THC-C-gluc with an upper limit of quantification of 2000 ng/mL. The linearity was r > 0.99 for all analyzed calibration curves. Acceptance criteria for intrabatch and interbatch accuracy (85%-115%) and imprecision (<15%) were met for all compounds. In plasma, the only exceptions were THCV (75.3%-121.2% interbatch accuracy) and cannabidivarin (interbatch imprecision, 15.7%-17.2%). In urine, THCV did not meet predefined acceptance criteria for intrabatch accuracy. This assay allows for monitoring not only THC and its major metabolites but also major cannabinoids that are of interest for marijuana research and clinical practice.

A Rab11A/myosin Vb/Rab11-FIP2 complex frames two late recycling steps of langerin from the ERC to the plasma membrane.

Science.gov (United States)

Gidon, Alexandre; Bardin, Sabine; Cinquin, Bertrand; Boulanger, Jerome; Waharte, François; Heliot, Laurent; de la Salle, Henri; Hanau, Daniel; Kervrann, Charles; Goud, Bruno; Salamero, Jean

2012-06-01

A large body of knowledge relating to the constitution of Rab GTPase/Rab effector complexes and their impact on both membrane domain organization and overall membrane trafficking has been built up in recent years. However in the context of the live cell there are still many questions that remain to be answered, such as where and when these complexes assemble and where they perform their primary function(s). We describe here the dynamic processes that take place in the final steps of the Rab11A dependent recycling pathway, in the context of the membrane platform constituted by Myosin Vb, Rab11A, and Rab11-FIP2. We first confirm that a series of previously reported observations obtained during the study of a number of trafficking cargoes also apply to langerin. Langerin is a cargo molecule that traffics through Rab11A-positive membrane domains of the endosomal recycling pathway. In order to explore the relative dynamics of this set of partners, we make extensive use of a combinatory approach of Live-FRET, fast FRAP video, fast confocal and TIRF microscopy modalities. Our data show that the Myosin Vb/Rab11A/Rab11-FIP2 platform is spatially involved in the regulation of langerin trafficking at two distinct sites within live cells, first at the sorting site in the endosomal recycling compartment (ERC) where transport vesicles are formed, and subsequently, in a strict time-defined order, at the very late stage of docking/tethering and fusion of these langerin recycling vesicles to the plasma membrane. © 2012 John Wiley & Sons A/S.

Comparison of single-step and two-step purified coagulants from Moringa oleifera seed for turbidity and DOC removal.

Science.gov (United States)

Sánchez-Martín, J; Ghebremichael, K; Beltrán-Heredia, J

2010-08-01

The coagulant proteins from Moringa oleifera purified with single-step and two-step ion-exchange processes were used for the coagulation of surface water from Meuse river in The Netherlands. The performances of the two purified coagulants and the crude extract were assessed in terms of turbidity and DOC removal. The results indicated that the optimum dosage of the single-step purified coagulant was more than two times higher compared to the two-step purified coagulant in terms of turbidity removal. And the residual DOC in the two-step purified coagulant was lower than in single-step purified coagulant or crude extract. (c) 2010 Elsevier Ltd. All rights reserved.

Representation of riverine DOC within a GCM: First framework for coupling soil carbon and lateral hydrology in MPI-ESM

Science.gov (United States)

Brovkin, V.; Gehlot, S.; Hagemann, S.

2017-12-01

The current state of the art General Circulation Models (GCMs) do not consider the lateral transport of dissolved organic carbon (DOC) from land to ocean via rivers/streams and the global carbon budget is primarily evaluated based only on vertical gas exchange processes between land or ocean carbon reservoirs. In high latitudes, the permafrost plays an important role in contributing to riverine organic carbon. Moreover, the vertical gas exchange processes are active during the lateral riverine carbon transport but are not considered in the impact of thawing permafrost on global climate. The interplay between permafrost and lateral hydrology is a substantial factor impacting the organic carbon inflow to the Arctic and its associated atmospheric exchange. In this research, we propose a framework of coupling the soil carbon transport via rivers using the hydrological discharge scheme (HD-Model) of MPI-ESM (Max-Planck Institute for Meteorology Earth System Model). The soil carbon classification is based on the solubility (YASSO soil carbon pools) and their subsequent attribution to the dissolved organic carbon via runoff (fast carbon pool) and baseflow (slow carbon pool). The HD-model, which simulates the river discharge for all land areas at a resolution of 0.5 degree, will be modified with inclusion of the DOC as tracer over test areas. Evaluation of DOC transport scheme is intended at reservoir level via available site measurements. The analysis will include global river networks for organic carbon transport with focus on permafrost and high latitude areas. Decomposition of DOC en-route land to ocean via vertical gas exchange processes will be included.

Supersonic plasma jet interaction with gases and plasmas

Czech Academy of Sciences Publication Activity Database

Nicolai, P.; Stenz, C.; Tikhonchuk, V.; Ribeyre, X.; Kasperczuk, A.; Pisarczyk, T.; Juha, Libor; Krouský, Eduard; Mašek, Karel; Pfeifer, Miroslav; Rohlena, Karel; Skála, Jiří; Ullschmied, Jiří; Kálal, M.; Klír, D.; Kravárik, J.; Kubeš, P.; Pisarczyk, P.

2009-01-01

Roč. 322, 1-4 (2009), 11-17 ISSN 0004-640X R&D Projects: GA MŠk(CZ) LC528; GA MŠk LA08024 Institutional research plan: CEZ:AV0Z10100523; CEZ:AV0Z20430508 Keywords : supersonic plasma jet * laser experiment * shock Subject RIV: BL - Plasma and Gas Discharge Physics Impact factor: 1.404, year: 2009

Plasma based markers of [11C] PiB-PET brain amyloid burden.

Directory of Open Access Journals (Sweden)

Steven John Kiddle

Full Text Available Changes in brain amyloid burden have been shown to relate to Alzheimer's disease pathology, and are believed to precede the development of cognitive decline. There is thus a need for inexpensive and non-invasive screening methods that are able to accurately estimate brain amyloid burden as a marker of Alzheimer's disease. One potential method would involve using demographic information and measurements on plasma samples to establish biomarkers of brain amyloid burden; in this study data from the Alzheimer's Disease Neuroimaging Initiative was used to explore this possibility. Sixteen of the analytes on the Rules Based Medicine Human Discovery Multi-Analyte Profile 1.0 panel were found to associate with [(11C]-PiB PET measurements. Some of these markers of brain amyloid burden were also found to associate with other AD related phenotypes. Thirteen of these markers of brain amyloid burden--c-peptide, fibrinogen, alpha-1-antitrypsin, pancreatic polypeptide, complement C3, vitronectin, cortisol, AXL receptor kinase, interleukin-3, interleukin-13, matrix metalloproteinase-9 total, apolipoprotein E and immunoglobulin E--were used along with co-variates in multiple linear regression, and were shown by cross-validation to explain >30% of the variance of brain amyloid burden. When a threshold was used to classify subjects as PiB positive, the regression model was found to predict actual PiB positive individuals with a sensitivity of 0.918 and a specificity of 0.545. The number of APOE [Symbol: see text] 4 alleles and plasma apolipoprotein E level were found to contribute most to this model, and the relationship between these variables and brain amyloid burden was explored.

Enseñanza individual a través de Skype y Google Docs

Directory of Open Access Journals (Sweden)

Agata Łazor

2013-07-01

Full Text Available El artículo presenta ideas para clases on-line utilizando Google Docs ySkype. En la parte teórica se explica el concepto de enseñanza virtual asincrónica ysincrónica. Se comentan las ventajas e inconvenientes de ambos modos de enseñanza.Los ejercicios prácticos utilizan sobre todo los métodos y herramientas sincrónicos ytienen el propósito de utilizar varias aplicaciones de Google Docs. Todas las tareas seadaptan a diferentes estilos de aprendizaje. La primera está relacionada con recordar yrepetir colocaciones y expresiones. En el segundo ejercicio se utiliza una fotografía y sela etiqueta aprovechando la opción dada por Google Drawing. En la tercera tarea seaplican tanto las estrategias de e-learning sincrónico como asincrónico y consiste en lacorrección on-line de una tarea previamente escrita. La última tarea implica la búsquedaen internet de una página web y la simulación de un intercambio de e-mails con elpropietario de un piso.

Enseñanza individual a través de Skype y Google Docs

Directory of Open Access Journals (Sweden)

Agata Łazor

2013-01-01

Full Text Available El artículo presenta ideas para clases on-line utilizando Google Docs y Skype. En la parte teórica se explica el concepto de enseñanza virtual asincrónica y sincrónica. Se comentan las ventajas e inconvenientes de ambos modos de enseñanza.Los ejercicios prácticos utilizan sobre todo los métodos y herramientas sincrónicos y tienen el propósito de utilizar varias aplicaciones de Google Docs. Todas las tareas se adaptan a diferentes estilos de aprendizaje. La primera está relacionada con recordar y repetir colocaciones y expresiones. En el segundo ejercicio se utiliza una fotografía y se la etiqueta aprovechando la opción dada por Google Drawing. En la tercera tarea se aplican tanto las estrategias de e-learning sincrónico como asincrónico y consiste en la corrección on-line de una tarea previamente escrita. La última tarea implica la búsqueda en internet de una página web y la simulación de un intercambio de e-mails con el propietario de un piso.

The physiological response of two green calcifying algae from the Great Barrier Reef towards high dissolved inorganic and organic carbon (DIC and DOC availability.

Directory of Open Access Journals (Sweden)

Friedrich Wilhelm Meyer

Full Text Available Increasing dissolved inorganic carbon (DIC concentrations associated with ocean acidification can affect marine calcifiers, but local factors, such as high dissolved organic carbon (DOC concentrations through sewage and algal blooms, may interact with this global factor. For calcifying green algae of the genus Halimeda, a key tropical carbonate producer that often occurs in coral reefs, no studies on these interactions have been reported. These data are however urgently needed to understand future carbonate production. Thus, we investigated the independent and combined effects of DIC (pCO2 402 μatm/ pHtot 8.0 and 996 μatm/ pHtot 7.7 and DOC (added as glucose in 0 and 294 μmol L-1 on growth, calcification and photosynthesis of H. macroloba and H. opuntia from the Great Barrier Reef in an incubation experiment over 16 days. High DIC concentrations significantly reduced dark calcification of H. opuntia by 130 % and led to net dissolution, but did not affect H. macroloba. High DOC concentrations significantly reduced daily oxygen production of H. opuntia and H. macroloba by 78 % and 43 %, respectively, and significantly reduced dark calcification of H. opuntia by 70%. Combined high DIC and DOC did not show any interactive effects for both algae, but revealed additive effects for H. opuntia where the combination of both factors reduced dark calcification by 162 % compared to controls. Such species-specific differences in treatment responses indicate H. opuntia is more susceptible to a combination of high DIC and DOC than H. macroloba. From an ecological perspective, results further suggest a reduction of primary production for Halimeda-dominated benthic reef communities under high DOC concentrations and additional decreases of carbonate accretion under elevated DIC concentrations, where H. opuntia dominates the benthic community. This may reduce biogenic carbonate sedimentation rates and hence the buffering capacity against further ocean

The physiological response of two green calcifying algae from the Great Barrier Reef towards high dissolved inorganic and organic carbon (DIC and DOC) availability.

Science.gov (United States)

Meyer, Friedrich Wilhelm; Vogel, Nikolas; Teichberg, Mirta; Uthicke, Sven; Wild, Christian

2015-01-01

Increasing dissolved inorganic carbon (DIC) concentrations associated with ocean acidification can affect marine calcifiers, but local factors, such as high dissolved organic carbon (DOC) concentrations through sewage and algal blooms, may interact with this global factor. For calcifying green algae of the genus Halimeda, a key tropical carbonate producer that often occurs in coral reefs, no studies on these interactions have been reported. These data are however urgently needed to understand future carbonate production. Thus, we investigated the independent and combined effects of DIC (pCO2 402 μatm/ pHtot 8.0 and 996 μatm/ pHtot 7.7) and DOC (added as glucose in 0 and 294 μmol L-1) on growth, calcification and photosynthesis of H. macroloba and H. opuntia from the Great Barrier Reef in an incubation experiment over 16 days. High DIC concentrations significantly reduced dark calcification of H. opuntia by 130 % and led to net dissolution, but did not affect H. macroloba. High DOC concentrations significantly reduced daily oxygen production of H. opuntia and H. macroloba by 78 % and 43 %, respectively, and significantly reduced dark calcification of H. opuntia by 70%. Combined high DIC and DOC did not show any interactive effects for both algae, but revealed additive effects for H. opuntia where the combination of both factors reduced dark calcification by 162 % compared to controls. Such species-specific differences in treatment responses indicate H. opuntia is more susceptible to a combination of high DIC and DOC than H. macroloba. From an ecological perspective, results further suggest a reduction of primary production for Halimeda-dominated benthic reef communities under high DOC concentrations and additional decreases of carbonate accretion under elevated DIC concentrations, where H. opuntia dominates the benthic community. This may reduce biogenic carbonate sedimentation rates and hence the buffering capacity against further ocean acidification.

Examining the interrelationship between DOC, bromide and chlorine dose on DBP formation in drinking water--a case study.

Science.gov (United States)

Bond, Tom; Huang, Jin; Graham, Nigel J D; Templeton, Michael R

2014-02-01

During drinking water treatment aqueous chlorine and bromine compete to react with natural organic matter (NOM). Among the products of these reactions are potentially harmful halogenated disinfection by-products, notably four trihalomethanes (THM4) and nine haloacetic acids (HAAs). Previous research has concentrated on the role of bromide in chlorination reactions under conditions of a given NOM type and/or concentration. In this study different concentrations of dissolved organic carbon (DOC) from U.K. lowland water were reacted with varying amounts of bromide and chlorine in order to examine the interrelationship between the three reactants in the formation of THM4, dihaloacetic acids (DHAAs) and trihaloacetic acids (THAAs). Results showed that, in general, molar yields of THM4 increased with DOC, bromide and chlorine concentrations, although yields did fluctuate versus chlorine dose. In contrast both DHAA and THAA yields were mainly independent of changes in bromide and chlorine dose at low DOC (1 mg·L(-1)), but increased with chlorine dose at higher DOC concentrations (4 mg·L(-1)). Bromine substitution factors reached maxima of 0.80, 0.67 and 0.65 for the THM4, DHAAs and THAAs, respectively, at the highest bromide/chlorine ratio studied. These results suggest that THM4 formation kinetics depend on both oxidation and halogenation steps, whereas for DHAAs and THAAs oxidation steps are more important. Furthermore, they indicate that high bromide waters may prove more problematic for water utilities with respect to THM4 formation than for THAAs or DHAAs. While mass concentrations of all three groups increased in response to increased bromide incorporation, only the THMs also showed an increase in molar yield. Overall, the formation behaviour of DHAA and THAA was more similar than that of THM4 and THAA. © 2013.

Temporal and spatial variation in Hg accumulation in zebra mussels (Dreissena polymorpha): possible influences of DOC and diet.

Science.gov (United States)

Kraemer, Lisa D; Evans, Douglas; Dillon, Peter J

2013-05-01

Zebra mussels (Dreissena polymorpha) are filter feeders located near the base of the foodweb and these animals are able to utilize a variety of carbon sources that may also vary seasonally. We conducted both a spatial and a temporal study in order to test the hypotheses: (1) dissolved organic carbon (DOC) concentrations influence Hg accumulation in zebra mussels sampled from a series of lakes and (2) seasonal variations in diet influence Hg accumulation. In the spatial study, we found a significant negative relationship between Hg concentrations and DOC concentrations, suggesting an influence of DOC on Hg bioaccumulation. In the temporal study, we used stable isotope ratios of nitrogen (δ(15)N) and carbon (δ(13)C) as ecological tools to provide a temporally integrated description of the feeding ecology of zebra mussels. Both δ(15)N and δ(13)C varied seasonally in a similar manner: more depleted values occurred in the summer and more enriched values occurred in the fall. Mercury concentrations also varied significantly over the year, with highest concentrations occurring in the summer, followed by a progressive decrease in concentrations into the fall. The C/N ratio of zebra mussels also varied significantly over the year with the lowest values occurring mid-summer and then values increased in the fall and winter, suggesting that there was significant variation in lipid stores. These results indicate that in addition to any effect of seasonal dietary changes, seasonal variation in energy stores also appeared to be related to Hg levels in the zebra mussels. Collectively results from this study suggest that DOC concentrations, seasonal variation in diet and seasonal depletion of energy stores are all important variables to consider when understanding Hg accumulation in zebra mussels. Copyright © 2013 Elsevier Inc. All rights reserved.

Early Metabolome Profiling and Prognostic Value in Paraquat-Poisoned Patients: Based on Ultraperformance Liquid Chromatography Coupled To Quadrupole Time-of-Flight Mass Spectrometry.

Science.gov (United States)

Hu, Lufeng; Hong, Guangliang; Tang, Yahui; Wang, Xianqin; Wen, Congcong; Lin, Feiyan; Lu, Zhongqiu

2017-12-18

Paraquat (PQ) has caused countless deaths throughout the world. There remains no effective treatment for PQ poisoning. Here we study the blood metabolome of PQ-poisoned patients using ultraperformance liquid chromatography coupled to quadrupole time-of-flight mass spectrometry (UPLC/Q-TOF MS). Patients were divided into groups according to blood PQ concentration. Healthy subjects served as controls. Metabolic features were statistically analyzed using multivariate pattern-recognition techniques to identify the most important metabolites. Selected metabolites were further compared with a series of clinical indexes to assess the prognostic value. PQ-poisoned patients showed substantial differences compared with healthy subjects. Based on variable of importance in the project (VIP) values and statistical analysis, 17 metabolites were selected and identified. These metabolites well-classified low PQ-poisoned patients, high PQ-poisoned patients, and healthy subjects, which was better than that of a complete blood count (CBC). Among the 17 metabolites, 20:3/18:1-PC (PC), LPA (0:0/16:0) (LPA), 19-oxo-deoxycorticosterone (19-oxo-DOC), and eicosapentaenoic acid (EPA) had prognostic value. In particular, EPA was the most sensitive one. Besides, the levels of EPA was correlated with LPA and 19-oxo-DOC. If EPA was excessively consumed, then prognosis was poor. In conclusion, the serum metabolome is substantially perturbed by PQ poisoning. EPA is the most important biomarker in early PQ poisoning.

Characterisation of the appearance of radioactive metabolites in monkey and human plasma from the 5-HT1A receptor radioligand, [carbonyl-11C]WAY-100635 - explanation of high signal contrast in PET and an aid to biomathematical modelling

International Nuclear Information System (INIS)

Osman, Safiye; Lundkvist, Camilla; Pike, Victor W.; Halldin, Christer; McCarron, Julie A.; Swahn, Carl-Gunnar; Farde, Lars; Ginovart, Nathalie; Luthra, Sajinder K.; Gunn, Roger N.; Bench, Christopher J.; Sargent, Peter A.; Grasby, Paul M.

1998-01-01

N-(2-(4-(2-Methoxy-phenyl)-1-piperazin-1-yl)ethyl)-N-(2-pyridyl) cyclohexanecarboxamide (WAY-100635), labelled in its amido carbonyl group with 11 C (t 1/2 = 20.4 min), is a promising radioligand for the study of brain 5-HT 1A receptors with positron emission tomography (PET). Thus, in PET experiments in six cynomolgus monkeys and seven healthy male volunteers, [carbonyl- 11 C]WAY-100635 was taken up avidly by brain. Radioactivity was retained in regions rich in 5-HT 1A receptors, such as occipital cortex, temporal cortex and raphe nuclei, but cleared rapidly from cerebellum, a region almost devoid of 5-HT 1A receptors. [Carbonyl- 11 C]WAY-100635 provides about 3- and 10-fold higher signal contrast (receptor-specific to nonspecific binding) than [O-methyl- 11 C]WAY-100635 in receptor-rich areas of monkey and human brain, respectively. To elucidate the effect of label position on radioligand behaviour and to aid in the future biomathematical interpretation of the kinetics of regional cerebral radioactivity uptake in terms of receptor-binding parameters, HPLC was used to measure [carbonyl- 11 C]WAY-100635 and its radioactive metabolites in plasma at various times after intravenous injection. Radioactivity cleared rapidly from monkey and human plasma. Parent radioligand represented 19% of the radioactivity in monkey plasma at 47 min and 8% of the radioactivity in human plasma at 40 min. [Carbonyl- 11 C]desmethyl-WAY-100635 was below detectable limits in monkey plasma and at most a very minor radioactive metabolite in human plasma. [ 11 C]Cyclohexanecarboxylic acid was identified as a significant radioactive metabolite. In human plasma this maximally represented 21% of the radioactivity at 10 min after radioligand injection. All other major radioactive metabolites in monkey and human plasma were even more polar. No-carrier-added [carbonyl- 11 C]cyclohexanecarboxylic acid was prepared in the laboratory and after intravenous administration into cynomolgus monkey was

Development of robotic plasma radiochemical assays for positron emission tomography

International Nuclear Information System (INIS)

Alexoff, D.L.; Shea, C.; Fowler, J.S.; Gatley, S.J.; Schlyer, D.J.

1995-01-01

A commercial laboratory robot system (Zymate PyTechnology II Laboratory Automation System; Zymark Corporation, Hopkinton, MA) was interfaced to standard and custom laboratory equipment and programmed to perform rapid radiochemical analyses for quantitative PET studies. A Zymark XP robot arm was used to carry out the determination of unchanged (parent) radiotracer in plasma using only solid phase extraction methods. Robotic throughput for the assay of parent radiotracer in plasma is 4--6 samples/hour depending on the radiotracer. Robotic assays of parent compound in plasma were validated for the radiotracers [ 11 C]Benztropine, [ 11 C]cocaine, [ 11 C]clorgyline, [ 11 C]deprenyl, [ 11 C]methadone, [ 11 C]methylphenidate, [ 11 C]raclorpride, and [ 11 C]SR46349B. A simple robot-assisted methods development strategy has been implemented to facilitate the automation of plasma assays of new radiotracers

Transport and transformation of soil-derived CO2, CH4 and DOC sustain CO2 supersaturation in small boreal streams.

Science.gov (United States)

Rasilo, Terhi; Hutchins, Ryan H S; Ruiz-González, Clara; Del Giorgio, Paul A

2017-02-01

Streams are typically supersaturated in carbon dioxide (CO 2 ) and methane (CH 4 ), and are recognized as important components of regional carbon (C) emissions in northern landscapes. Whereas there is consensus that in most of the systems the CO 2 emitted by streams represents C fixed in the terrestrial ecosystem, the pathways delivering this C to streams are still not well understood. We assessed the contribution of direct soil CO 2 injection versus the oxidation of soil-derived dissolved organic C (DOC) and CH 4 in supporting CO 2 supersaturation in boreal streams in Québec. We measured the concentrations of CO 2 , CH 4 and DOC in 43 streams and adjacent soil waters during summer base-flow period. A mass balance approach revealed that all three pathways are significant, and that the mineralization of soil-derived DOC and CH 4 accounted for most of the estimated stream CO 2 emissions (average 75% and 10%, respectively), and that these estimated contributions did not change significantly between the studied low order (≤3) streams. Whereas some of these transformations take place in the channel proper, our results suggest that they mainly occur in the hyporheic zones of the streams. Our results further show that stream CH 4 emissions can be fully explained by soil CH 4 inputs. This study confirms that these boreal streams, and in particular their hyporheic zones, are extremely active processors of soil derived DOC and CH 4 , not just vents for soil produced CO 2 . Copyright © 2016 Elsevier B.V. All rights reserved.

Los ejes DOC una estrategia conceptual y metodológica en la construcción del Conocimiento Profesional del Profesor

Directory of Open Access Journals (Sweden)

Guillermo Fonseca Amaya

2018-01-01

Full Text Available La didáctica de las ciencias como una disciplina en consolidación, se construye a través de diversas lineas de investigación, entre ellas El conocimiento Profesional del Profesor, que surge en razón de la necesidad de comprender cómo los profesores en formación y en ejercicio construyen un conocimiento singular de su profesión. Los Ejes DOC (Dinamizador, Obstáculo y Cuestionamiento, se constituyen en un dispositivo conceptual y metodológico de orden reflexivo sobre los aspectos que se articulan en la construcción del Conocimiento Profesional del Profesor. Acorde con ello, se presentan los resultados de un proceso de I-A, en donde un profesor en formación, comprende que la evaluación y la estrategia de enseñanza (investigación escolar, se constituyen en Ejes DOC que aportan en su proceso de formación como profesor de biología. Derivado del estudio de caso es posible evidenciar dos características de los Ejes DOC (Dinamizador, Obstáculo y Cuestionamiento la coexistencia temporal de los ejes sobre un conocimiento y la posibilidad de su transformación. Así, se considera que los Ejes DOC, son una propuesta conceptual que no sólo en la investigación en didáctica, sino también en los procesos formativos, realiza aportes tanto en la comprensión como en la transformación y enriquecimiento del conocimiento profesional.

eDOC : A collaboration infrastructure to manage knowledge and information on nuclear projects and research activities

International Nuclear Information System (INIS)

Van Craeynest, J.M.; Jacquemet, F.; Chermette, D.; Bonneau, S.

2004-01-01

One of EU's strategic goals was launched at Lisbon 2000 European summit: becoming the most competitive knowledge economy by 2010. In the field of nuclear technologies, we know that capitalizing knowledge and acquired experience is vital to preserve nuclear equipment's' safe use in the future. Knowledge Management encompasses various domains of business practices, relating to human resources management, information, information technologies, strategy, and accounting. Facing such complex issues, especially in R and D organizations, knowledge management cannot only stand on a few organizational or technical solutions. All functions must be involved to achieve those strategic objectives: management must find realistic incentives and inscribe Knowledge Management as a core management objective (just as Quality Insurance has been). Human Resources departments and education institutes can benefit from new technologies to improve training methods. Research units have to launch knowledge capitalization projects to retrieve, save and transfer critical knowledge, technical skills and know-how. An a-posteriori knowledge saving 'fireman-type' action must be done in the case of major events but we must promote an on-going capitalization effort as well and embed KM into projects and activities management methods. This effort during the project and afterwards is implemented through a perennial information system. This information system should provide a wide range of services for scientific publications and patents management, corporate or local knowledge bases and document repositories, project management and collaboration, rich media authoring, etc. Implementing virtual workspaces with eDOC Research and engineering activities are more and more cross-organizations funded and netlike organized. Furthermore, it is very difficult for project managers to deal with security constraints as they must share but protect knowledge as well. Before sharing information, teams have to share a

Introduction to Plasma Physics

Science.gov (United States)

Gurnett, Donald A.; Bhattacharjee, Amitava

2017-03-01

Preface; 1. Introduction; 2. Characteristic parameters of a plasma; 3. Single particle motions; 4. Waves in a cold plasma; 5. Kinetic theory and the moment equations; 6. Magnetohydrodynamics; 7. MHD equilibria and stability; 8. Discontinuities and shock waves; 9. Electrostatic waves in a hot unmagnetized plasma; 10. Waves in a hot magnetized plasma; 11. Nonlinear effects; 12. Collisional processes; Appendix A. Symbols; Appendix B. Useful trigonometric identities; Appendix C. Vector differential operators; Appendix D. Vector calculus identities; Index.

The design of PoliDocs: a web information system for the disclosure of Dutch parliamentary publications

NARCIS (Netherlands)

Gielissen, T.; Marx, M.

2009-01-01

The development of PoliDocs.nl, a Web Information System for the disclosure of Dutch parliamentary publications, is an effort to improve the disclosure of parliamentary publications in The Netherlands. The data is distributed over three sources and is available through different Web Information

Gender determination in the Paiche or Pirarucu (Arapaima gigas) using plasma vitellogenin, 17beta-estradiol, and 11-ketotestosterone levels.

Science.gov (United States)

Chu-Koo, F; Dugué, R; Alván Aguilar, M; Casanova Daza, A; Alcántara Bocanegra, F; Chávez Veintemilla, C; Duponchelle, F; Renno, J-F; Tello, Salvador; Nuñez, J

2009-03-01

Arapaima gigas is an air-breathing giant fish of Amazonian rivers. Given its great economic and cultural importance, the aquaculture development of this species represents an evident solution to face the decline of wild populations. In captivity, reproduction occurs generally in large earthen ponds where stocks of a few tens of brooders are maintained together at the beginning of the rainy season (December-March in the Peruvian Amazon). Fry production relies on the spontaneous formation of male and female pairs, which build a nest, delimit a territory and guard the offspring for at least 20 days from other congeners and predators. However, as sex determination of A. gigas is not possible by morphological criteria, it is very difficult to optimize reproduction conditions and fry production in each pond, which seriously hampers the culture of this species. This situation prompted us to develop sexing methodologies based on (1) the detection of female specific plasma Vitellogenin (Vtg) using an enzyme immuno assay (EIA), and (2) the determination of plasma 17beta-estradiol and 11-ketotestosterone levels for immature specimens. The Vtg purification was performed by electro-elution after polyacrilamide gel electrophoresis (PAGE) from plasma of 17beta-estradiol treated A. gigas juveniles. Two different Vtg molecules were isolated, (Vtg(1) and Vtg(2)) with 184 and 112 kDa apparent molecular masses, respectively, and two antibodies were raised in rabbits for each Vtg molecule. Adult fish were 100% accurately sexed by Vtg EIA, while 100% of immature fish and 95% of adults were accurately sexed by 17beta-Estradiol and 11-Ketestosterone ratios. We also observed different color pattern development in male and female adult fish (6-year-olds) around the reproductive period.

Google Docs as a Tool for Collaborative Writing in the Middle School Classroom

OpenAIRE

Yanan Fan; Megan P Woodrich

2017-01-01

Aim/Purpose: In this study, the authors examine how an online word processing tool can be used to encourage participation among students of different language back-grounds, including English Language Learners. To be exact, the paper discusses whether student participation in anonymous collaborative writing via Google Docs can lead to more successful products in a linguistically diverse eighth-grade English Language Arts classroom. Background: English Language Learners (ELLs) make up a con...

Lightweight Portable Plasma Medical Device - Plasma Engineering Research Laboratory

Science.gov (United States)

2014-10-01

by Remote Exposure of Resistive Barrier Cold Plasma." Biotechnology and Bioengineering, vol. 111, No. 3. p. 565 - 574 (2014). 16. Magesh...remote exposure of resistive barrier cold plasma.” Biotechnology and Bioengineering. (Accepted for publication in the next issue in 2013) 11. Magesh...foes-Safety-and-Security--1945) 4. “University Touts ’Superbug’ Killing Technology”, Quality Assurance and Food Safety Magazine , July 2013. (Link

Understanding SOL plasma turbulence by interchange motions

Czech Academy of Sciences Publication Activity Database

Horáček, Jan; Pitts, R. A.; Nielsen, A.H.; Garcia, O.E.

2007-01-01

Roč. 52, č. 16 (2007), s. 192-193 ISSN 0003-0503. [Annual meeting of the division of plasma physics/49th./. Orlando , 12.11.2007-16.11.2007] Grant - others:-(XE) European Training fellowships and Grants (Euratom), EDGETURB Institutional research plan: CEZ:AV0Z20430508 Keywords : tokamak * plasma * scrape-off layer * turbulence * interchange instability Subject RIV: BL - Plasma and Gas Discharge Physics http://meetings.aps.org/Meeting/DPP07/Event/70125

Effects of ocean acidification and hydrodynamic conditions on carbon metabolism and dissolved organic carbon (DOC) fluxes in seagrass populations.

Science.gov (United States)

Egea, Luis G; Jiménez-Ramos, Rocío; Hernández, Ignacio; Bouma, Tjeerd J; Brun, Fernando G

2018-01-01

Global change has been acknowledged as one of the main threats to the biosphere and its provision of ecosystem services, especially in marine ecosystems. Seagrasses play a critical ecological role in coastal ecosystems, but their responses to ocean acidification (OA) and climate change are not well understood. There have been previous studies focused on the effects of OA, but the outcome of interactions with co-factors predicted to alter during climate change still needs to be addressed. For example, the impact of higher CO2 and different hydrodynamic regimes on seagrass performance remains unknown. We studied the effects of OA under different current velocities on productivity of the seagrass Zostera noltei, using changes in dissolved oxygen as a proxy for the seagrass carbon metabolism, and release of dissolved organic carbon (DOC) in a four-week experiment using an open-water outdoor mesocosm. Under current pH conditions, increasing current velocity had a positive effect on productivity, but this depended on shoot density. However, this positive effect of current velocity disappeared under OA conditions. OA conditions led to a significant increase in gross production rate and respiration, suggesting that Z. noltei is carbon-limited under the current inorganic carbon concentration of seawater. In addition, an increase in non-structural carbohydrates was found, which may lead to better growing conditions and higher resilience in seagrasses subjected to environmental stress. Regarding DOC flux, a direct and positive relationship was found between current velocity and DOC release, both under current pH and OA conditions. We conclude that OA and high current velocity may lead to favourable growth scenarios for Z. noltei populations, increasing their productivity, non-structural carbohydrate concentrations and DOC release. Our results add new dimensions to predictions on how seagrass ecosystems will respond to climate change, with important implications for the

Effects of ocean acidification and hydrodynamic conditions on carbon metabolism and dissolved organic carbon (DOC fluxes in seagrass populations.

Directory of Open Access Journals (Sweden)

Luis G Egea

Full Text Available Global change has been acknowledged as one of the main threats to the biosphere and its provision of ecosystem services, especially in marine ecosystems. Seagrasses play a critical ecological role in coastal ecosystems, but their responses to ocean acidification (OA and climate change are not well understood. There have been previous studies focused on the effects of OA, but the outcome of interactions with co-factors predicted to alter during climate change still needs to be addressed. For example, the impact of higher CO2 and different hydrodynamic regimes on seagrass performance remains unknown. We studied the effects of OA under different current velocities on productivity of the seagrass Zostera noltei, using changes in dissolved oxygen as a proxy for the seagrass carbon metabolism, and release of dissolved organic carbon (DOC in a four-week experiment using an open-water outdoor mesocosm. Under current pH conditions, increasing current velocity had a positive effect on productivity, but this depended on shoot density. However, this positive effect of current velocity disappeared under OA conditions. OA conditions led to a significant increase in gross production rate and respiration, suggesting that Z. noltei is carbon-limited under the current inorganic carbon concentration of seawater. In addition, an increase in non-structural carbohydrates was found, which may lead to better growing conditions and higher resilience in seagrasses subjected to environmental stress. Regarding DOC flux, a direct and positive relationship was found between current velocity and DOC release, both under current pH and OA conditions. We conclude that OA and high current velocity may lead to favourable growth scenarios for Z. noltei populations, increasing their productivity, non-structural carbohydrate concentrations and DOC release. Our results add new dimensions to predictions on how seagrass ecosystems will respond to climate change, with important

DOC and DON Dynamics along the Bagmati Drainage Network in Kathmandu Valley

Science.gov (United States)

Bhatt, M. P.; McDowell, W. H.

2005-05-01

We studied organic matter dynamics and inorganic chemistry of the Bagmati River in Kathmandu valley, Nepal, to understand the influence of human and geochemical processes on chemical loads along the drainage system. Population density appears to be the most fundamental control on the chemistry of surface waters within the Bagmati drainage system. DOC concentration increases 10-fold with distance downstream (from 2.38 to 23.95 mg/L) and shows a strong relationship with human population density. The composition of river water (nutrients, Cl) suggests that sewage effluent to the river has a major effect on water quality. Concentrations were highest during summer, and lowest during the winter monsoon season. In contrast to DOC, DON concentration shows surprisingly little variation, and tends to decrease in concentration with distance downstream. Ammonium contributes almost all nitrogen in the total dissolved nitrogen fraction and the concentration of nitrate is negligible, probably due to rapid denitrification within the stream channel under relatively low-oxygen conditions. Decreases in sulfate along the stream channel may also be due to the reduction of sulfate to sulfide due to the heavy organic matter loading. Water quality is unacceptable for any use and the whole ecosystem is severely affected within the urban areas. Based on a comparison of downstream and upstream water quality, it appears that human activities along the Bagmati, principally inputs of human sewage, are largely responsible for the changes in surface water chemistry within Kathmandu valley.

What advice is given to newly qualified doctors on Twitter? An analysis of #TipsForNewDocs tweets.

Science.gov (United States)

Rashid, Mohammed Ahmed; McKechnie, Doug; Gill, Deborah

2018-07-01

Twitter is a social media platform on which users post very brief messages that can be rapidly communicated across wide geographical areas and audiences. Many doctors use Twitter for personal as well as professional communications and networking. The #TipsForNewDocs hashtag is used on Twitter to give advice to newly qualified doctors as they commence their careers. This study explores the nature and focus of such advice. An analysis of Twitter activity containing the #TipsForNewDocs hashtag was performed using Symplur health care analytics software. Tweets sent during a peak 48-hour period in 2016 (immediately preceding the first day of work for newly qualified UK doctors) were studied. The geographical locations and professional backgrounds of participants were categorised and the content of tweets was subjected to thematic analysis. During 1 and 2 August 2016, 661 unique #TipsForNewDocs tweets were posted. A total of 621 (94.0%) were posted by people in the UK; 522 (79.0%) were posted by doctors, and the remainder by allied health care professionals and patients. The majority of included tweets focused on aspects of professional development, improving personal or professional knowledge, particularly tacit knowledge, and developing 'know-how'. These aspects of professional knowledge have previously been described as fundamental to professional education and training. However, a significant subset of tweets focused on accelerating socialisation into the profession, an essential step in joining a professional community. The tweets relating to socialisation were often humorous and colloquial in nature. Despite their brief and often jocular nature, #TipsForNewDocs tweets provided meaningful advice for newcomers to the profession, often focusing on tacit learning and professional socialisation. Hashtag-driven enquiries can be a valuable and time-efficient way of accessing and sharing tacitly held knowledge. Social media content analysis can provide valuable insights

Influence of fresh water, nutrients and DOC in two submarine-groundwater-fed estuaries on the west of Ireland.

Science.gov (United States)

Smith, Aisling M; Cave, Rachel R

2012-11-01

Coastal fresh water sources, which discharge to the sea are expected to be directly influenced by climate change (e.g. increased frequency of extreme weather events). Sea-level rise and changes in rainfall patterns, changes in demand for drinking water and contamination caused by population and land use change, will also have an impact. Coastal waters with submarine groundwater discharge are of particular interest as this fresh water source is very poorly quantified. Two adjacent bays which host shellfish aquaculture sites along the coast of Co. Galway in the west of Ireland have been studied to establish the influence of fresh water inputs on nutrients and dissolved organic carbon (DOC) in each bay. Neither bay has riverine input and both are underlain by the karst limestone of the Burren and are susceptible to submarine groundwater discharge. Water and suspended matter samples were collected half hourly over 13 h tidal cycles over several seasons. Water samples were analysed for nutrients and DOC, while suspended matter was analysed for organic/inorganic content. Temperature and salinity measurements were recorded during each tidal station by SBE 37 MicroCAT conductivity/temperature sensors. Long-term mooring data were used to track freshwater input for Kinvara and Aughinish Bays and compare it with rainfall data. Results show that Kinvara Bay is much more heavily influenced by fresh water input than Aughinish Bay, and this is a strong source of fixed nitrogen to Kinvara Bay. Only during flood events is there a significant input of inorganic nitrogen from fresh water to Aughinish Bay, such as in late November 2009. Fresh water input does not appear to be a significant source of dissolved inorganic phosphate (DIP) to either bay, but is a source of DOC to both bays. C:N ratios of DOC/DON show a clear distinction between marine and terrestrially derived dissolved organic material. Copyright © 2012. Published by Elsevier B.V.

Effect of Inorganic and Organic Carbon Enrichments (DIC and DOC) on the Photosynthesis and Calcification Rates of Two Calcifying Green Algae from a Caribbean Reef Lagoon.

Science.gov (United States)

Meyer, Friedrich W; Schubert, Nadine; Diele, Karen; Teichberg, Mirta; Wild, Christian; Enríquez, Susana

2016-01-01

Coral reefs worldwide are affected by increasing dissolved inorganic carbon (DIC) and organic carbon (DOC) concentrations due to ocean acidification (OA) and coastal eutrophication. These two stressors can occur simultaneously, particularly in near-shore reef environments with increasing anthropogenic pressure. However, experimental studies on how elevated DIC and DOC interact are scarce and fundamental to understanding potential synergistic effects and foreseeing future changes in coral reef function. Using an open mesocosm experiment, the present study investigated the impact of elevated DIC (pHNBS: 8.2 and 7.8; pCO2: 377 and 1076 μatm) and DOC (added as 833 μmol L-1 of glucose) on calcification and photosynthesis rates of two common calcifying green algae, Halimeda incrassata and Udotea flabellum, in a shallow reef environment. Our results revealed that under elevated DIC, algal photosynthesis decreased similarly for both species, but calcification was more affected in H. incrassata, which also showed carbonate dissolution rates. Elevated DOC reduced photosynthesis and calcification rates in H. incrassata, while in U. flabellum photosynthesis was unaffected and thalus calcification was severely impaired. The combined treatment showed an antagonistic effect of elevated DIC and DOC on the photosynthesis and calcification rates of H. incrassata, and an additive effect in U. flabellum. We conclude that the dominant sand dweller H. incrassata is more negatively affected by both DIC and DOC enrichments, but that their impact could be mitigated when they occur simultaneously. In contrast, U. flabellum can be less affected in coastal eutrophic waters by elevated DIC, but its contribution to reef carbonate sediment production could be further reduced. Accordingly, while the capacity of environmental eutrophication to exacerbate the impact of OA on algal-derived carbonate sand production seems to be species-specific, significant reductions can be expected under future

Effect of Inorganic and Organic Carbon Enrichments (DIC and DOC on the Photosynthesis and Calcification Rates of Two Calcifying Green Algae from a Caribbean Reef Lagoon.

Directory of Open Access Journals (Sweden)

Friedrich W Meyer

Full Text Available Coral reefs worldwide are affected by increasing dissolved inorganic carbon (DIC and organic carbon (DOC concentrations due to ocean acidification (OA and coastal eutrophication. These two stressors can occur simultaneously, particularly in near-shore reef environments with increasing anthropogenic pressure. However, experimental studies on how elevated DIC and DOC interact are scarce and fundamental to understanding potential synergistic effects and foreseeing future changes in coral reef function. Using an open mesocosm experiment, the present study investigated the impact of elevated DIC (pHNBS: 8.2 and 7.8; pCO2: 377 and 1076 μatm and DOC (added as 833 μmol L-1 of glucose on calcification and photosynthesis rates of two common calcifying green algae, Halimeda incrassata and Udotea flabellum, in a shallow reef environment. Our results revealed that under elevated DIC, algal photosynthesis decreased similarly for both species, but calcification was more affected in H. incrassata, which also showed carbonate dissolution rates. Elevated DOC reduced photosynthesis and calcification rates in H. incrassata, while in U. flabellum photosynthesis was unaffected and thalus calcification was severely impaired. The combined treatment showed an antagonistic effect of elevated DIC and DOC on the photosynthesis and calcification rates of H. incrassata, and an additive effect in U. flabellum. We conclude that the dominant sand dweller H. incrassata is more negatively affected by both DIC and DOC enrichments, but that their impact could be mitigated when they occur simultaneously. In contrast, U. flabellum can be less affected in coastal eutrophic waters by elevated DIC, but its contribution to reef carbonate sediment production could be further reduced. Accordingly, while the capacity of environmental eutrophication to exacerbate the impact of OA on algal-derived carbonate sand production seems to be species-specific, significant reductions can be expected

Sean Michaletz Directors Post Doc Fellow Report

Energy Technology Data Exchange (ETDEWEB)

Wilson, Cathy Jean [Los Alamos National Lab. (LANL), Los Alamos, NM (United States)

2017-10-30

Predicting climate change effects on plant function is a central challenge of global change biology and a primary mission of DOE. Although increasing temperatures and drought have been associated with reduced growth and increased mortality of plants, accurate prediction of such responses is limited by a lack of process-based theory linking climate and whole-plant physiology. This inability to predict forest mortality can cause significant biases in climate forecasts. One way forward is metabolic scaling theory (MST), which proposes that physiologic rates – from cells to the globe – are governed by the rates of resource distribution through vascular networks and the kinetics of resource utilization by metabolic reactions. MST has traditionally not considered rates of resource acquisition from organism-environment interactions, but it has an ideal mechanistic basis for doing so. As a first step towards integrating these processes, Sean has extended MST to characterize effects of temperature and precipitation on plant growth and ecosystem production. Sean’s post doc fellowship aimed to address a remaining shortcoming in that the new theory does not yet consider the physical processes of resource acquisition, and thus cannot mechanistically predict plant performance in a changing climate.

Gas injected washer plasma gun

International Nuclear Information System (INIS)

Jain, K.K.; John, P.I.; Punithavelu, A.M.; Rao, P.P.

1980-01-01

A plasma gun similar in geometry to the washer plasma gun has been operated with gas injected externally. hydrogen, nitrogen and argon plasmas have been ionised and accelerated to velocities of the order of 10 7 mm s -1 and densities 10 11 mm -3 . Higher parameter range is possible with higher electrical input power. (author)

Functional validation of putative toxin-antitoxin genes from the Gram-positive pathogen Streptococcus pneumoniae: phd-doc is the fourth bona-fide operon.

Science.gov (United States)

Chan, Wai Ting; Yeo, Chew Chieng; Sadowy, Ewa; Espinosa, Manuel

2014-01-01

Bacterial toxin-antitoxin (TAs) loci usually consist of two genes organized as an operon, where their products are bound together and inert under normal conditions. However, under stressful circumstances the antitoxin, which is more labile, will be degraded more rapidly, thereby unleashing its cognate toxin to act on the cell. This, in turn, causes cell stasis or cell death, depending on the type of TAs and/or time of toxin exposure. Previously based on in silico analyses, we proposed that Streptococcus pneumoniae, a pathogenic Gram-positive bacterium, may harbor between 4 and 10 putative TA loci depending on the strains. Here we have chosen the pneumococcal strain Hungary(19A)-6 which contains all possible 10 TA loci. In addition to the three well-characterized operons, namely relBE2, yefM-yoeB, and pezAT, we show here the functionality of a fourth operon that encodes the pneumococcal equivalent of the phd-doc TA. Transcriptional fusions with gene encoding Green Fluorescent Protein showed that the promoter was slightly repressed by the Phd antitoxin, and exhibited almost background values when both Phd-Doc were expressed together. These findings demonstrate that phd-doc shows the negative self-regulatory features typical for an authentic TA. Further, we also show that the previously proposed TAs XreA-Ant and Bro-XreB, although they exhibit a genetic organization resembling those of typical TAs, did not appear to confer a functional behavior corresponding to bona fide TAs. In addition, we have also discovered new interesting bioinformatics results for the known pneumococcal TAs RelBE2 and PezAT. A global analysis of the four identified toxins-antitoxins in the pneumococcal genomes (PezAT, RelBE2, YefM-YoeB, and Phd-Doc) showed that RelBE2 and Phd-Doc are the most conserved ones. Further, there was good correlation among TA types, clonal complexes and sequence types in the 48 pneumococcal strains analyzed.

Using Google Docs to Enhance the Teacher Work Sample: Building e-Portfolios for Learning and Practice

Science.gov (United States)

Gugino, Jessica

2018-01-01

The use of teaching portfolios in teacher education programs is a widely accepted practice. This article describes how a traditional teacher work sample was transformed using the online platform, Google Docs. The use of online digital portfolios may help to satisfy both the need to evaluate teacher candidates' performance in special education…

Google Docs as a Tool for Collaborative Writing in the Middle School Classroom

Directory of Open Access Journals (Sweden)

Yanan Fan

2017-10-01

Full Text Available Aim/Purpose: In this study, the authors examine how an online word processing tool can be used to encourage participation among students of different language back-grounds, including English Language Learners. To be exact, the paper discusses whether student participation in anonymous collaborative writing via Google Docs can lead to more successful products in a linguistically diverse eighth-grade English Language Arts classroom. Background: English Language Learners (ELLs make up a considerable portion of elementary and secondary public school students, as language and ethnic diversity has become the norm in the United States. The research literature finds that ELLs are statistically behind their monolingual peers on such key language and academic development indicators as writing. Educators and researchers then turn to collaborative writing with the assistance of online technology. Although it is shown in literature to be a worthwhile endeavor for students of all ages and ability levels, no studies have investigated the differences it makes, namely, in comparison to traditional face-to-face collaboration in the classroom, and to anonymous online collaboration in the virtual space. Methodology: Through face-to-face, online, and anonymous writing activities, a rubric, and a survey, this quantitative study asks if anonymous collaborative writing, com-pared to other modalities, equalizes participation among students of varying language fluencies, and if anonymous collaborative writing, compared to other modalities, affect student comfort levels. Contribution: This builds on research of online collaborative writing tools and suggests that using such tools (Google Docs in particular is beneficial, especially for students who are building their language abilities. The study further reveals varied degree of success and student comfort level in participating writing tasks in three modalities. Findings: We ascertain that students of varying language

Red de Repositorios IODE/COI/Unesco de acceso abierto en Ciencias Marinas en América Latina y el Caribe: OceanDocs

Directory of Open Access Journals (Sweden)

Andrea Cristiani

2014-03-01

Full Text Available Se presenta la organización, funciones y evolución de la red de repositorios de acceso abierto OceanDocs, particularmente la experiencia de instituciones vinculadas a las Ciencias Marinas en América Latina y el Caribe. En el marco de las Redes de Datos e Información Oceanográfica de la Comisión Oceanográfica Intergubernamental (COI de UNESCO, surgieron iniciativas de repositorios locales y regionales, que más tarde se consolidan y dan lugar a la red internacional de repositorios en Ciencias Marinas:  OceanDocs. En la actualidad esta red está integrada por repositorios institucionales, repositorios regionales y un repositorio central alojado por la COI. OceanDocs cuenta con políticas comunes definidas, un Grupo Directivo conformado por especialistas de distintas áreas que planifica y establece las directrices para la red, coordinadores nacionales y regionales, Unidades de Información a nivel institucional responsables de la carga de documentos, y una creciente comunidad de usuarios a nivel global.

A formação pedagógica institucional para a docência na Educação Superior

Directory of Open Access Journals (Sweden)

Cláudia Chueire Oliveira

2011-08-01

Full Text Available Apresentam-se resultados de uma pesquisa sobre docência e formação pedagógica na universidade, visando contribuir para o processo de formação dos docentes que atuam na Educação Superior, colhendo subsídios para a elaboração de programas institucionais. A opção metodológica pautou-se na abordagem de cunho qualitativo, de caráter exploratório-descritivo. O questionário foi o instrumento para a coleta de dados junto aos docentes e estudantes de cursos de graduação. Os resultados indicam que a construção da docência superior e o ensino de boa qualidade precisam de investimentos institucionais pedagógicos, administrativos e materiais; a carreira docente universitária requer propostas e iniciativas institucionais que alterem dimensões do ensino e da aprendizagem e sua sustentação teórico-pedagógica; a qualidade do ensino deve superar o equívoco da unilateralidade da pesquisa como instrumentalização para a ação docente; as possibilidades e limites institucionais refletem escolhas da profissionalização e permitem mapeamento das bases epistemológicas da docência no campo da Educação Superior.

Light absorption properties of CDOM in the Changjiang (Yangtze) estuarine and coastal waters: An alternative approach for DOC estimation

Science.gov (United States)

Yu, Xiaolong; Shen, Fang; Liu, Yangyang

2016-11-01

Field measurements of CDOM absorption properties and DOC concentrations were collected in the Changjiang estuarine and coastal waters from 2011 to 2013. CDOM absorption coefficient at 355 nm (ag (355)) was found to be inversely correlated with salinity, with Pearson's coefficients r of -0.901 and -0.826 for summer and winter observations, respectively. Analysis results of the relationships between salinity and CDOM optical properties (i.e., absorption coefficient and spectral slope) suggested that terrigenous inputs dominated CDOM sources in the Changjiang estuary, but the proportion of terrigenous CDOM declined with increasing salinity. The level of CDOM in the Changjiang estuary was lower compared to some of the major estuaries in the world, which could be attributed to several controlling factors such as vegetation cover in the drainage basin, the origin of recharged streams and high sediment load in the Changjiang estuary. We further evaluated the relationships between CDOM and DOC and their mixing behavior among world's major estuaries. An empirical model was finally developed to estimate DOC concentration from ag (355) and spectral slope S275-295 using a non-linear regression. This empirical relationship was calibrated using the Cal dataset, and was validated with the Val dataset, resulting in an acceptable error with the R2 of 0.746, the RMSE of 20.99 μmol/L and the rMAD of 14.46%.

Physical inactivity is associated with decreased growth differentiation factor 11 in chronic obstructive pulmonary disease

Directory of Open Access Journals (Sweden)

Tanaka R

2018-04-01

Full Text Available Rie Tanaka,1 Hisatoshi Sugiura,1 Mitsuhiro Yamada,1 Tomohiro Ichikawa,1 Akira Koarai,1 Naoya Fujino,1 Satoru Yanagisawa,1 Katsuhiro Onodera,1 Tadahisa Numakura,1 Kei Sato,1 Yorihiko Kyogoku,1 Hirohito Sano,1 Shun Yamanaka,1 Tatsuma Okazaki,1 Tsutomu Tamada,1 Motohiko Miura,2 Tsuneyuki Takahashi,3 Masakazu Ichinose1 1Department of Respiratory Medicine, Tohoku University Graduate School of Medicine, Aoba-ku, Sendai, Japan; 2Department of Respiratory Medicine, Tohoku Rosai Hospital, Aoba-ku, Sendai, Japan; 3Department of Internal Medicine, Tohoku Medical and Pharmaceutical University Wakabayashi Hospital, Wakabayashi-ku, Sendai, Japan Background: Growth differentiation factor 11 (GDF11 is reported to possess anti-aging and rejuvenating effects, including muscle regeneration and to be highly expressed in skeletal muscle. Recently, we demonstrated that the levels of plasma GDF11 were decreased in COPD. However, the effect of decreased circulating GDF11 in the pathophysiology of COPD remains unknown. The aim of this study is to investigate the association between the plasma GDF11 levels and various clinical parameters in patients with COPD. Patients and methods: Eighteen ex-smokers as control subjects and 70 COPD patients participated in the current study. We measured the levels of plasma GDF11 using immunoblotting, lung function, physical activity using a triaxial accelerometer, quadriceps strength, exercise capacity, and systemic inflammatory markers. We investigated the association between the levels of plasma GDF11 and these clinical parameters. Results: The levels of plasma GDF11 in the COPD patients had significant positive correlations with the data of lung function. Furthermore, the levels of plasma GDF11 were significantly correlated with the physical activity, quadriceps strength, and exercise capacity. Moreover, the levels of plasma GDF11 were significantly correlated with the data of inflammatory markers. Although various factors were

A History of Depression in Women is Associated with an Altered GABAergic Neuroactive Steroid Profile

OpenAIRE

Girdler, Susan S.; Lindgren, Monica; Porcu, Patrizia; Rubinow, D.R.; Johnson, J. L.; Morrow, A. Leslie

2011-01-01

The 3α,5α- and 3α,5β-reduced metabolites of progesterone, deoxycorticosterone, and dehydroepiandrosterone (DHEA) have potent effects on neurotransmission mediated by GABAA receptors, and dysregulation of these receptors has been implicated in depression. Using gas chromatography-mass spectrometry, we compared neuroactive steroid concentrations in women with a history of depressive disorders, but who were in full remission at the time of testing (n=11) to never depressed women (n=17) both befo...

Organic carbon budget for the eastern boundary of the North Atlantic subtropical gyre: major role of DOC in mesopelagic respiration.

Science.gov (United States)

Santana-Falcón, Yeray; Álvarez-Salgado, Xosé Antón; Pérez-Hernández, María Dolores; Hernández-Guerra, Alonso; Mason, Evan; Arístegui, Javier

2017-08-31

Transports of suspended particulate (POC susp ) and dissolved (DOC) organic carbon are inferred from a box-model covering the eastern boundary of the North Atlantic subtropical gyre. Corresponding net respiration rates (R) are obtained from a net organic carbon budget that is based on the transport estimates, and includes both vertical and lateral fluxes. The overall R in the mesopelagic layer (100-1500 m) is 1.6 ± 0.4 mmol C m -2 d -1 . DOC accounts for up to 53% of R as a result of drawdown of organic carbon within Eastern North Atlantic Central Water (ENACW) that is entrained into sinking Mediterranean Overflow Water (MOW) that leads to formation of Mediterranean water (MW) at intermediate depths (~900 m). DOC represents 90% of the respired non-sinking organic carbon. When converted into oxygen units, the computed net respiration rate represents less than half the oxygen utilization rates (OUR) reported for the mesopelagic waters of the subtropical North Atlantic. Mesoscale processes in the area, not quantified with our approach, could account in part for the OUR differences observed between our carbon budget and other published studies from the North Atlantic, although seasonal or interannual variability could also be responsible for the difference in the estimates.

C-MORE Professional Development Training Program for Graduate Students and Post-Docs

Science.gov (United States)

Bruno, B. C.; DeLeo, F.; Bottjer, D.; Jungbluth, S.; Burkhardt, B.; Hawco, N.; Boiteau, R.

2012-12-01

The Center for Microbial Oceanography: Research and Education (C-MORE) is a National Science Foundation-sponsored Science and Technology Center. C-MORE comprises six partner institutions: University of Hawaii (headquarters), Massachusetts Institute of Technology, Woods Hole Oceanographic Institution, Oregon State University, University of California at Santa Cruz and Monterey Bay Aquarium Research Institute. C-MORE's Professional Development Training Program is aimed at equipping graduate students and post-docs at all six institutions with the skills and experiences needed to maximize their potential and succeed in their professional careers. This program is administered through the C-MORE Education Office and was developed in close collaboration with graduate students, post-docs, and faculty. This program has formal but flexible requirements. There is only one required module (Outreach). The seven optional modules include: Science Communication, Leadership, Mentoring, Teaching, Research Exchange, Diversity and Proposal Writing. Masters students choose three optional modules; Ph.D. students and post-docs choose five. Most modules consist of a training component, followed by a practical component. All participants will are expected to complete program evaluations. Below are some examples of program offerings: Science Communication Module In partnership with the Communication Partnership for Science and the Sea, C-MORE organized three Science Communication workshops at the University of Hawaii, Monterey Bay Aquarium Research Institute and Massachusetts Institute of Technology. These workshops train participants to distill their research into language that is free of jargon and accessible to a general audience. After the training, participants are asked to produce a communication product based on their research, such as a magazine article, press release, podcast or a blog. Diversity Module To date, C-MORE has organized three teleconferences on diversity, attended by

Plasma Dynamics of the Arc-Driven Rail Gun

Science.gov (United States)

1980-09-01

Authors’ unpublished calculations. 11. A.B. Cambel , Plasma Physics and Magnetofluidmechanics (McGraw-Hill New York, 1963), Chap. 8. ’ 16 k T P = (1 +cO...Energy, and Forces (Wiley, New York, 1960), Chap. 9. 10. Authors’ unpublished calculations. 11. A.B. Cambel , Plasma Physics and Magnetofluidmechanics

A radiometabolite study of the serotonin transporter PET radioligand [11C]MADAM

International Nuclear Information System (INIS)

Gourand, F.; Emond, P.; Bergström, J.P.; Takano, A.; Gulyás, B.; Guilloteau, D.; Barré, L.; Halldin, C.

2014-01-01

Introduction: 11 C]MADAM is a radioligand suitable for PET studies of the serotonin transporter (SERT). Metabolite analysis in human and non-human plasma samples using HPLC separation has shown that [ 11 C]MADAM was rapidly metabolized. A possible metabolic pathway is the S-oxidation which could lead to SOMADAM and SO 2 MADAM. In vitro evaluation of these two potential metabolites has shown that SOMADAM exhibited a good affinity for SERT and a good selectivity for SERT over NET and DAT. Methods: Comparative PET imaging studies in non-human primate brain with [ 11 C]MADAM and [ 11 C]SOMADAM were carried out, and plasma samples were analyzed using reverse phase HPLC. We have explored the metabolism of [ 11 C]MADAM in rat brain with a view to understand its possible interference for brain imaging with PET. Results: PET imaging studies in non-human primate brain using [ 11 C]SOMADAM indicated that this tracer does not bind with high amounts to brain regions known to be rich in SERT. The fraction of [ 11 C]SOMADAM in non-human primate plasma was approximately 5% at 4 min and 1% at 15 min after [ 11 C]MADAM injection. HPLC analysis of brain sample after [ 11 C]MADAM injection to rats demonstrated that [ 11 C]SOMADAM was not detected in the brain. Conclusions: 11 C]SOMADAM is not superior over [ 11 C]MADAM as a SERT PET radioligand. Nevertheless, [ 11 C]SOMADAM has been identified as a minor labeled metabolite of [ 11 C]MADAM measured in monkey plasma. [ 11 C]SOMADAM was not detected in rat brain

Experiment on the diagnostics of the interplanetary and magnetospheric plasma on the ''Venera-11, 12'' automatic interplanetary stations and the ''Prognoz 7'' artificial Earth satellite

International Nuclear Information System (INIS)

Vajsberg, O.L.; Gorn, L.S.; Ermolaev, Yu.I.

1979-01-01

Solar wind with the Earth magnetosphere are studied. The experiments have been carried out at the ''Venera 11'', ''Venera 12'' automatic interplanetary stations and at the ''Prognoz 7'' artificial satellite of the Earth in 1978-79 with the help of the three identical combined plasma spectrometers. The SCS spectrometer measures the electron, proton and α particle spectra in the energy ranges of 10-200 eV, 250-5000 eV, and 500-10000 eV, respectively. Examples of energy spectra of charged particles are presented. Some characteristics of solar wind and the Earth magnetosphere plasma are discussed

Radioimmunoassay of plasma progesterone

Energy Technology Data Exchange (ETDEWEB)

Langer, L; Veleminsky, J [Institute of Clinical Endocrinology, Lubochna (Czechoslovakia); Hampl, R; Starka, L [Vyzkumny Ustav Endokrinologicky, Prague (Czechoslovakia); Holan, J [Comenius Univ., School of Medicine, Martin (Czechoslovakia). Dept. of Physics and Nuclear Medicine

1978-06-30

A simple modification of plasma progesterone radioimmunoassay is described. 11..cap alpha..-Hydroxyprogesterone hemisuccinate - BSA conjugate was used as an immunogen. (1,2,6,7-H-3) Progesterone specific radioactivity 82 Ci.mmol/sup -1/ was purchased from Radiochemical Centre Amersham (England). The method has been applied for the analysis of more than 2000 plasma samples. The typical fluctuation of progesterone in plasma during the menstrual cycle, using data obtained with this method is illustrated. The reliability criteria of the method are given.

Radioligand binding analysis of α 2 adrenoceptors with [11C]yohimbine in brain in vivo: Extended Inhibition Plot correction for plasma protein binding.

Science.gov (United States)

Phan, Jenny-Ann; Landau, Anne M; Jakobsen, Steen; Wong, Dean F; Gjedde, Albert

2017-11-22

We describe a novel method of kinetic analysis of radioligand binding to neuroreceptors in brain in vivo, here applied to noradrenaline receptors in rat brain. The method uses positron emission tomography (PET) of [ 11 C]yohimbine binding in brain to quantify the density and affinity of α 2 adrenoceptors under condition of changing radioligand binding to plasma proteins. We obtained dynamic PET recordings from brain of Spraque Dawley rats at baseline, followed by pharmacological challenge with unlabeled yohimbine (0.3 mg/kg). The challenge with unlabeled ligand failed to diminish radioligand accumulation in brain tissue, due to the blocking of radioligand binding to plasma proteins that elevated the free fractions of the radioligand in plasma. We devised a method that graphically resolved the masking of unlabeled ligand binding by the increase of radioligand free fractions in plasma. The Extended Inhibition Plot introduced here yielded an estimate of the volume of distribution of non-displaceable ligand in brain tissue that increased with the increase of the free fraction of the radioligand in plasma. The resulting binding potentials of the radioligand declined by 50-60% in the presence of unlabeled ligand. The kinetic unmasking of inhibited binding reflected in the increase of the reference volume of distribution yielded estimates of receptor saturation consistent with the binding of unlabeled ligand.

Jevgenij V. Doc: We do not want to build a monument at Mochovce

International Nuclear Information System (INIS)

Janoska, J.

2004-01-01

In this paper the interview with the General Manager of Inter RAO JES - Jevgenij V. Doc is published. Inter RAO JES applies for the privatisation of Slovenske elektrarne (Slovak Electric - SE). According to the General Manager of Inter RAO JES, the company does not need a foreign partner to provide financial support after the privatisation of SE, but rather it requires a political support. Plans about Bohunice NPP and of completion of the Mochovce NPP as well as of privatisation of the SE by the Inter RAO JES are presented

Regulation of Ca2+ channels by SNAP-25 via recruitment of syntaxin-1 from plasma membrane clusters

DEFF Research Database (Denmark)

Toft-Bertelsen, Trine Lisberg; Ziomkiewicz, Iwona; Houy, Sébastien

2016-01-01

expression recruits syntaxin-1 from clusters on the plasma membrane, thereby increasing the immunoavailability of syntaxin-1 and leading indirectly to Ca(2+) current inhibition. Expression of Munc18-1, which recruits syntaxin-1 within the exocytotic pathway, does not modulate Ca(2+) channels, whereas...... overexpression of the syntaxin-binding protein Doc2B or ubMunc13-2 increases syntaxin-1 immunoavailability and concomitantly down-regulates Ca(2+) currents. Similar findings were obtained upon chemical cholesterol depletion, leading directly to syntaxin-1 cluster dispersal and Ca(2+) current inhibition. We...

Tumor imaging with PET and C-11 thymidine

International Nuclear Information System (INIS)

Conti, P.S.; Hilton, J.; Magee, C.A.; Anderson, J.H.

1989-01-01

Accurate interpretation of kinetic positron-emission tomographic (PET) data obtained following administration of C-11 thymidine requires identification of radiolabeled metabolites. The authors goal is to quantitate rapidly formed metabolites of C-11 thymidine by using reproducible high-pressure liquid chromatography (HPLC). Following coinjection of methyl-C-11 and methyl-C-14 thymidine, dogs bearing implanted glioblastoma were imaged with PET. Plasma samples were collected, and dogs were sacrificed at 60 minutes. Tissues were prepared for quantitative autoradiography and analysis of radioactivity associated with DNA, RNA protein, and acid soluble extracts. Plasma and tissue extracts were analyzed by HPLC by using C-18 reverse phase and dilute buffer mobile phase systems for the separation of catabolites and phosphorylated nucleotides

[Ratio of erythrocyte and plasma in massive blood transfusion].

Science.gov (United States)

Wen, Xian-Hui; Liu, Feng-Xia; Zhang, Jun-Hua; Gui, Rong

2014-06-01

This study was purposed to explore the suitable ratio between fresh frozen plasma and erythrocyte by retrospective analysis of coagulation in patients with massive blood transfusion. The clinical data of 151 cases with massive blood transfusion from January 2011 to January 2013 were analyzed retrospectively. According to coagulation, patients were divided into coagulation normal group (138 cases) and coagulation dysfunction group (13 cases). Based on the ratio of 1:1 of fresh frozen plasma and erythrocyte, the patients were divided into high plasma group(2:1), medium plasma group (1:1) and low plasma (blood transfusion. The results showed that prothrombin time (PT), activated partial thromboplastin time (APTT) and thrombin time (TT) were prolonged, fibrinogen (FIB) level decreased significantly (all P blood transfusion 24 h; the high plasma and the medium plasma group of coagulation normal group had no significant changes in coagulation (P > 0.05); prothrombin time, activated partial thromboplastin time, thrombin time and fibrinogen level in the medium plasma and low plasma subgroup of coagulation dysfunction group after massive transfusion was still in abnormal levels (P > 0.05), coagulation function in high plasma subgroup was improved significantly (P blood transfusion, the ratio between fresh frozen plasma and erythrocyte is recommended to be 2:1 in patients of coagulation dysfunction in order to improve the patient's coagulation function and to reduce the incidence of adverse event, the ratio of fresh frozen plasma to erythrocyte is recommended to be 1:1 in patients with normal coagulation so as to reduce the dilutional coagulopathy and hypervolemia of blood.

Centrifugal mass separation in rotating plasmas produced by a coaxial plasma gun

International Nuclear Information System (INIS)

Ikehata, T.; Suzuki, M.; Tanabe, T.; Mase, H.

1989-01-01

Rotating Cu/Zn plasmas produced by a coaxial plasma gun have been applied to plasma centrifuge. A separation factor of up to 10 is measured over a radius of 4 cm when a current of 13 kA and an axial magnetic field of 2.5 kG are applied. Plasma parameters are: rotation frequency ω=1.1x10 6 rad/s, density n∼10 15 cm -3 , and ion temperature T i =10 eV. The separation factor of 2 is attained even in the plasma core where the density is higher than one-half of the peak value. This is attributed to the fact that a strong centrifugal force forms a hollow density profile which gives the density peak at a radius of 2 cm

Determination of plasma spot current and arc discharge plasma current on the system of plasma cathode electron sources using Rogowski coil technique

International Nuclear Information System (INIS)

Wirjoadi; Bambang Siswanto; Lely Susita RM; Agus Purwadi; Sudjatmoko

2015-01-01

It has been done the function test experiments of ignitor electrode system and the plasma generator electrode system to determine the current spot plasma and arc discharge plasma current with Rogowski coil technique. Ignitor electrode system that gets power supply from IDPS system can generate the plasma spot current of 11.68 ampere to the pulse width of about 33 μs, this value is greater than the design probably because of electronic components used in the IDPS system was not as planned. For the plasma generator electrode system that gets power from ADPS system capable of producing an arc discharge plasma current around 103.15 amperes with a pulse width of about 96 μs, and this value as planned. Based on the value of the arc discharge plasma current can be determined plasma electron density, which is about 10.12 10"1"9 electrons/m"3, and with this electron density value, an ignitor electrode system and a plasma generator system is quite good if used as a plasma cathode electron source system. (author)

Platelet-rich plasma in otolaryngology.

Science.gov (United States)

Stavrakas, M; Karkos, P D; Markou, K; Grigoriadis, N

2016-12-01

Platelet-rich plasma is a novel material that is being used more frequently in many surgical specialties. A literature review on the current and potential uses of platelet-rich plasma in otolaryngology was performed. There is limited evidence on the use of platelet-rich plasma in otolaryngology compared with other specialties: only 11 studies on various subspecialties (otology, rhinology and laryngology) were included in the final review. Based on the limited number of studies, we cannot draw safe conclusions about the value of platelet-rich plasma in otolaryngology. Nevertheless, the available literature suggests that platelet-rich plasma holds promise for future research and may have a number of clinical applications.

Exploring the Effects of Employing Google Docs in Collaborative Concept Mapping on Achievement, Concept Representation, and Attitudes

Science.gov (United States)

Lin, Yu-Tzu; Chang, Chia-Hu; Hou, Huei-Tse; Wu, Ke-Chou

2016-01-01

This study investigated the effectiveness of using Google Docs in collaborative concept mapping (CCM) by comparing it with a paper-and-pencil approach. A quasi-experimental study was conducted in a physics course. The control group drew concept maps using the paper-and-pencil method and face-to-face discussion, whereas the experimental group…

PARTICIPANT SUPPORT FOR THE 2010 GORDON RESEARCH CONFERENCE ON PLASMA PROCESSING SCIENCE (JULY 11-16,2010)

Energy Technology Data Exchange (ETDEWEB)

Uwe Kortshagen

2011-06-14

The 2010 Gordon Research Conference on Plasma Processing Science will feature a comprehensive program that will highlight the most cutting edge scientific advances in low temperature plasma science and will explore the applications of low temperature plasma technology relative to many grand societal challenges. Fundamental science sessions will focus on plasma kinetics, plasma surface interactions, and recent trends in plasma generation and multi-phase plasmas. Application sessions will explore the impact of plasma technology in renewable energy and the production of fuels from renewable feedstocks, plasma-enabled medicine and sterilization, and environmental remediation and waste treatment. The conference will bring together in an informal atmosphere leaders in the field with junior investigators and graduate students. The special format of the Gordon Conferences, with programmed discussion sessions and ample time for informal gatherings in the afternoons and evenings, will provide for a fertile atmosphere of brainstorming and creative thinking among the attendees.

The role of genetic variation in TCF7L2 and KCNJ11, dietary intake, and physical activity on fasting plasma glucagon-like peptide-1 in male adolescents

Directory of Open Access Journals (Sweden)

Harry Freitag Luglio

2018-01-01

Full Text Available Background Transcription factor 7-like 2 (TCF7L2 and potassium voltage-gated channel subfamily j member 11 (KCNJ11 gene polymorphisms have been associated with type 2 diabetes mellitus (T2DM via regulation of insulin production. Ingested nutrients induce glucagon-like peptide-1 (GLP-1, which in turn induces insulin secretion. Objective To evaluate the relationship between TCF7L2 and KCNJ11 gene polymorphism, dietary intake, and physical activity on fasting plasma GLP-1 in normal male adolescents. Methods This observational study with a cross-sectional design included 54 male adolescents selected from high schools in Yogyakarta, Indonesia. Interviews were done to collect data on energy intake and physical activity. The GLP-1 and insulin levels were measured from fasting blood plasma. The TCF7L2 and KCNJ11 gene polymorphisms were analyzed by polymerase chain reaction-restriction fragment length polymorphism (PCR-RFLP. Results Fasting GLP-1 was positively correlated with energy intake (r=0.276; P=0.047, but not with physical activity (r=0.011; P=0.936. The GLP-1 concentration was not associated with TCF7L2 and KCNJ11 gene polymorphisms (all P>0.05. In subjects with an EE genotype (KCNJ11, GLP-1 was not correlated with insulin (r=-0.036; P=0.435. However, in subjects with an EK genotype (KCNJ11, GLP-1 was positively correlated with insulin (r=0.394; P=0.026. Conclusion GLP-1 concentration is positively correlated with body weight. Among male adolescents with a genetic variation in KCNJ11 (EK genotype, there is a significant correlation between GLP-1 and insulin signalling.

The study of a plasma jet injected by an on-board plasma thruster

International Nuclear Information System (INIS)

Grebnev, I.A.; Ivanov, G.V.; Khodnenko, V.P.

1981-01-01

The injection of a steady plasma jet into the ionosphere results in interactions which were studied in experiments conducted onboard two Meteor satellites in 1977-1979. The jet parameters at the propulsion system output were as follows: propulsive mass: Xe Xe (+) ion density at the nozzle section 3 x 10 to the 11th per cu cm plasma stream divergence: 20 degrees jet velocity: 10-12 km/cm ion energy: 130 eV electron temperature: 1 + 3 eV. A Bennett-type modified radio-frequency mass-spectrometer and a two-channel electromagnetic wave analyzer were used for the measurements. It was found that (1) the injected plasma jet propagation depends on the jet injection pitch angle (2) when the plasma jet was injected along the magnetic field, impactless jet spreading took place without considerable interaction with the ionospheric plasma (3) when the plasma jet was injected across the magnetic field, considerable interaction was observed between the plasma jet/ionospheric plasma and the earth's magnetic field and (4) electromagnetic fields were generated near the satellite by plasma jet interaction

US-Japan workshop on field-reversed configurations with steady-state high-temperature fusion plasmas and the 11th US-Japan workshop on compact toroids

International Nuclear Information System (INIS)

Barnes, D.C.; Fernandez, J.C.; Rej, D.J.

1990-05-01

The US-Japan Workshop on Field-Reversed Configurations with Steady-State High-Temperature Fusion Plasma and the 11th US-Japan Workshop on Compact Toroids were held at Los Alamos National Laboratory, Los Alamos, New Mexico on November 7--9, 1989. These proceedings contain the papers presented at the workshops as submitted by the authors. These papers have been indexed separately

US-Japan workshop on field-reversed configurations with steady-state high-temperature fusion plasmas and the 11th US-Japan workshop on compact toroids

Energy Technology Data Exchange (ETDEWEB)

Barnes, D.C.; Fernandez, J.C.; Rej, D.J. (comps.)

1990-05-01

The US-Japan Workshop on Field-Reversed Configurations with Steady-State High-Temperature Fusion Plasma and the 11th US-Japan Workshop on Compact Toroids were held at Los Alamos National Laboratory, Los Alamos, New Mexico on November 7--9, 1989. These proceedings contain the papers presented at the workshops as submitted by the authors. These papers have been indexed separately.

Microwave measurements of the time evolution of electron density in the T-11M tokamak

International Nuclear Information System (INIS)

Petrov, V.G.; Petrov, A.A.; Malyshev, A.Yu.; Markov, V.K.; Babarykin, A.V.

2004-01-01

Unambiguous diagnostics intended for measuring the time behavior of the electron density and monitoring the line-averaged plasma density in the T-11M tokamak are described. The time behavior of the plasma density in the T-11M tokamak is measured by a multichannel phase-jump-free microwave polarization interferometer based on the Cotton-Mouton effect. After increasing the number of simultaneously operating interferometer channels and enhancing the sensitivity of measurements, it became possible to measure the time evolution of the plasma density profile in the T-11M tokamak. The first results from such measurements in various operating regimes of the T-11M tokamak are presented. The measurement and data processing techniques are described, the measurement errors are analyzed, and the results obtained are discussed. We propose using a pulsed time-of-flight refractometer to monitor the average plasma density in the T-11M tokamak. The refractometer emits nanosecond microwave probing pulses with a carrier frequency that is higher than the plasma frequency and, thus, operates in the transmission mode. A version of the instrument has been developed with a carrier frequency of 140 GHz, which allows one to measure the average density in regimes with a nominal T-11M plasma density of (3-5) x 10 13 cm -3 . Results are presented from the first measurements of the average density in the T-11M tokamak with the help of a pulsed time-of-flight refractometer by probing the plasma in the equatorial plane in a regime with the reflection of the probing radiation from the inner wall of the vacuum chamber

Spark Plasma Sintering (SPS)-Assisted Synthesis and Thermoelectric Characterization of Magnéli Phase V6O11

KAUST Repository

Joos, Markus

2018-01-11

The Magnéli phase V6O11 was synthesized in gram amounts from a powder mixture of V6O11/V7O13 and vanadium metal, using the spark plasma sintering (SPS) technique. Its structure was determined with synchrotron X-ray powder diffraction data from a phase-pure sample synthesized by conventional solid-state synthesis. A special feature of Magnéli-type oxides is a combination of crystallographic shear and intrinsic disorder that leads to relatively low lattice thermal conductivities. SPS prepared V6O11 has a relatively low thermal conductivity of κ = 2.72 ± 0.06 W (m K)-1 while being a n-type conductor with an electrical conductivity of σ = 0.039 ± 0.005 (μΩ m)-1, a Seebeck coefficient of α = -(35 ± 2) μV K-1, which leads to a power factor of PF = 4.9 ± 0.8 × 10-5W (m K2)-1 at ∼600 K. Advances in the application of Magnéli phases are mostly hindered by synthetic and processing challenges, especially when metastable and nanostructured materials such as V6O11 are involved. This study gives insight into the complications of SPS-assisted synthesis of complex oxide materials, provides new information about the thermal and electrical properties of vanadium oxides at high temperatures, and supports the concept of reducing the thermal conductivity of materials with structural building blocks such as crystallographic shear (CS) planes.

Spark Plasma Sintering (SPS)-Assisted Synthesis and Thermoelectric Characterization of Magnéli Phase V6O11

KAUST Repository

Joos, Markus; Cerretti, Giacomo; Veremchuk, Igor; Hofmann, Patrick; Frerichs, Hajo; Anjum, Dalaver H.; Reich, Tobias; Lieberwirth, Ingo; Panthö fer, Martin; Zeier, Wolfgang G.; Tremel, Wolfgang

2018-01-01

The Magnéli phase V6O11 was synthesized in gram amounts from a powder mixture of V6O11/V7O13 and vanadium metal, using the spark plasma sintering (SPS) technique. Its structure was determined with synchrotron X-ray powder diffraction data from a phase-pure sample synthesized by conventional solid-state synthesis. A special feature of Magnéli-type oxides is a combination of crystallographic shear and intrinsic disorder that leads to relatively low lattice thermal conductivities. SPS prepared V6O11 has a relatively low thermal conductivity of κ = 2.72 ± 0.06 W (m K)-1 while being a n-type conductor with an electrical conductivity of σ = 0.039 ± 0.005 (μΩ m)-1, a Seebeck coefficient of α = -(35 ± 2) μV K-1, which leads to a power factor of PF = 4.9 ± 0.8 × 10-5W (m K2)-1 at ∼600 K. Advances in the application of Magnéli phases are mostly hindered by synthetic and processing challenges, especially when metastable and nanostructured materials such as V6O11 are involved. This study gives insight into the complications of SPS-assisted synthesis of complex oxide materials, provides new information about the thermal and electrical properties of vanadium oxides at high temperatures, and supports the concept of reducing the thermal conductivity of materials with structural building blocks such as crystallographic shear (CS) planes.

Plasma-Materials Interactions Test Facility

International Nuclear Information System (INIS)

Uckan, T.

1986-11-01

The Plasma-Materials Interactions Test Facility (PMITF), recently designed and constructed at Oak Ridge National Laboratory (ORNL), is an electron cyclotron resonance microwave plasma system with densities around 10 11 cm -3 and electron temperatures of 10-20 eV. The device consists of a mirror cell with high-field-side microwave injection and a heating power of up to 0.8 kW(cw) at 2.45 GHz. The facility will be used for studies of plasma-materials interactions and of particle physics in pump limiters and for development and testing of plasma edge diagnostics

Beam-plasma discharge in a Kyoto beam-plasma-ion source

International Nuclear Information System (INIS)

Ishikawa, J.; Takagi, T.

1983-01-01

A beam-plasma type ion source employing an original operating principle has been developed by the present authors. The ion source consists of an ion extraction region with an electron gun, a thin long drift tube as the plasma production chamber, and a primary electron beam collector. An electron beam is effectively utilized for the dual purpose of high density plasma production as a result of beam-plasma discharge, and high current ion beam extraction with ion space-charge compensation. A high density plasma of the order of 10 11 --10 13 cm -3 was produced by virtue of the beam-plasma discharge which was caused by the interaction between a space-charge wave on the electron beam and a high frequency plasma wave. The plasma density then produced was 10 2 --10 3 times the density produced only by collisional ionization by the electron beam. In order to obtain a stable beam-plasma discharge, a secondary electron beam emitted from the electron collector should be utilized. The mechanism of the beam-plasma discharge was analyzed by use of a linear theory in the case of the small thermal energy of the electron beam, and by use of a quasilinear theory in the case of the large thermal energy. High current ion beams of more than 0.1 A were extracted even at a low extraction voltage of 1--5 kV

O desenvolvimento de competências para a docência segundo a vivência de docentes de um curso de graduação em enfermagem.

OpenAIRE

Inahiá Pinhel

2006-01-01

Este estudo versa sobre o desenvolvimento de competências para a docência segundo a vivência de docentes de um curso de graduação em enfermagem. Busca conhecer quando e como docentes de um curso de graduação de Enfermagem desenvolvem competências para a docência; identificar os conhecimentos e as habilidades desenvolvidas pelos docentes na construção de competências para o ensino de Enfermagem e identificar como intervir nesse processo, por meio da reflexão sobre a profissão docente. Realizad...

Social Constructivist Approach to Web-Based EFL Learning: Collaboration, Motivation, and Perception on the Use of Google Docs

Science.gov (United States)

Liu, Sarah Hsueh-Jui; Lan, Yu-Ju

2016-01-01

This study reports on the differences in motivation, vocabulary gain, and perceptions on using or the Google Docs between individual and collaborative learning at a tertiary level. Two classes of English-as-a-Foreign Language (EFL) students were recruited and each class was randomly assigned into one of the two groups--individuals or…

Effects of ketoconazole on the biodistribution and metabolism of [{sup 11}C]loperamide and [{sup 11}C]N-desmethyl-loperamide in wild-type and P-gp knockout mice

Energy Technology Data Exchange (ETDEWEB)

Seneca, Nicholas; Zoghbi, Sami S.; Shetty, H. Umesha; Tuan, Edward; Kannan, Pavitra; Taku, Andrew; Innis, Robert B. [Molecular Imaging Branch, National Institute of Mental Health, National Institutes of Health, Bethesda, MD 20892 (United States); Pike, Victor W. [Molecular Imaging Branch, National Institute of Mental Health, National Institutes of Health, Bethesda, MD 20892 (United States)], E-mail: pikev@mail.nih.gov

2010-04-15

Introduction: [{sup 11}C]Loperamide and [{sup 11}C]N-desmethyl-loperamide ([{sup 11}C]dLop) have been proposed as radiotracers for imaging brain P-glycoprotein (P-gp) function. A major route of [{sup 11}C]loperamide metabolism is N-demethylation to [{sup 11}C]dLop. We aimed to test whether inhibition of CYP3A4 with ketoconazole might reduce the metabolism of [{sup 11}C]loperamide and [{sup 11}C]dLop in mice, and thereby improve the quality of these radiotracers. Methods: Studies were performed in wild-type and P-gp knockout (mdr-1a/b -/-) mice. During each of seven study sessions, one pair of mice, comprising one wild-type and one knockout mouse, was pretreated with ketoconazole (50 mg/kg, ip), while another such pair was left untreated. Mice were sacrificed at 30 min after injection of [{sup 11}C]loperamide or [{sup 11}C]dLop. Whole brain and plasma samples were measured for radioactivity and analyzed with radio-high-performance liquid chromatography. Results: Ketoconazole increased the plasma concentrations of [{sup 11}C]loperamide and its main radiometabolite, [{sup 11}C]dLop, by about twofold in both wild-type and knockout mice, whereas the most polar radiometabolite was decreased threefold. Furthermore, ketoconazole increased the brain concentrations of [{sup 11}C]loperamide and the radiometabolite [{sup 11}C]dLop by about twofold in knockout mice, and decreased the brain concentrations of the major and most polar radiometabolite in wild-type and knockout mice by 82% and 49%, respectively. In contrast, ketoconazole had no effect on plasma and brain distribution of administered [{sup 11}C]dLop and its radiometabolites in either wild-type or knockout mice, except to increase the low plasma [{sup 11}C]dLop concentration. The least polar radiometabolite of [{sup 11}C]dLop was identified with LC-MS{sup n} as the N-hydroxymethyl analog of [{sup 11}C]dLop and this also behaved as a P-gp substrate. Conclusion: In this study, ketoconazole (50 mg/kg, ip) proved

Design advances of the Core Plasma Thomson Scattering diagnostic for ITER.

Czech Academy of Sciences Publication Activity Database

Scannell, R.; Maslov, M.; Naylor, G.; O’Gorman, T.; Kempenaars, M.; Carr, M.; Bílková, Petra; Böhm, Petr; Giudicotti, L.; Pasqualotto, R.; Bassan, M.; Vayakis, G.; Walsh, M.; Huxford, R.

2017-01-01

Roč. 12, November (2017), č. článku C11010. ISSN 1748-0221. [International Symposium on Laser-Aided Plasma Diagnostics (LAPD2017) /18./. Prague, 24.09.2017-28.09.2017] Institutional support: RVO:61389021 Keywords : Nuclear instruments and methods for hot plasma diagnostics * Plasma diagnostics - interferometry * spectroscopy and imaging Subject RIV: BL - Plasma and Gas Discharge Physics OBOR OECD: 2.11 Other engineering and technologies Impact factor: 1.220, year: 2016 http://iopscience.iop.org/article/10.1088/1748-0221/12/11/C11010/pdf

Radiofrequency power in plasmas

Energy Technology Data Exchange (ETDEWEB)

NONE

1995-12-31

This document includes the various communications that were presented at the 11th topical conference on radio frequency power in plasmas which took place in Palm Springs in May 1995. It includes current diffusion studies to assess the non-inductive current deposition profiles, experiments for plasma to reach quickly an equilibrium state, and modelling of electrons in plasma. Some comparison studies also reveal the efficiency of the Quasi-Optical Grill antenna for reactor applications. Finally, a scenario for efficient mode conversion heating in the ion cyclotron range of frequency is presented. Separate abstracts were prepared for the 6 papers in this volume. (TEC).

The response of dissolved organic carbon (DOC) and the ecosystem carbon balance to experimental drought in a temperate shrubland

DEFF Research Database (Denmark)

Sowerby, A.; Emmett, B.A.; Williams, D.

2010-01-01

in northeast Wales, we have carried out an annual drought treatment for 8 years, reducing levels of annual rainfall by 23% on average (1999–2007) through the use of automated roofs, which prevent rain falling on experimental plots between June and September annually. Following 5 years of repeated summer...... drainage of water from the drought-treated soils resulted in an overall decrease of 9% in total DOC export. Calculating the carbon (C) balance for the below-ground component of the ecosystem reveals that DOC represents 3% of gross C export. Previous studies at the site have demonstrated large increases...... in soil respiration resulting from the repeated drought treatment. By including data presented here with other C fluxes and pool measurements from the site, we demonstrate that soil carbon is accumulating by 126 g C m−2 year−1 in the control plots, but decreasing by 18 g C m2 year−1 in the drought plots...

Two anti-angiogenic TKI-PET tracers, [11C]axitinib and [11C]nintedanib: Radiosynthesis, in vivo metabolism and initial biodistribution studies in rodents

International Nuclear Information System (INIS)

Slobbe, Paul; Poot, Alex J.; Haumann, Rianne; Schuit, Robert C.; Windhorst, Albert D.; Dongen, Guus A.M.S. van

2016-01-01

Introduction: Tyrosine kinase inhibitors (TKIs) are very attractive targeted drugs, although a large portion of patients remains unresponsive. PET imaging with EGFR targeting TKIs ([ 11 C]erlotinib and [ 18 F]afatinib) showed promise in identifying treatment sensitive tumors. The aim of this study was to synthesize two anti-angiogenic TKI tracers, [ 11 C]axitinib and [ 11 C]nintedanib, and to evaluate their potential for PET. Methods: Following successful tracer synthesis, biodistribution studies in VU-SCC-OE and FaDu xenograft bearing mice were performed. Furthermore, tracer stability studies in mice were performed employing (radio-)HPLC and LC–MS/MS techniques. For [ 11 C]nintedanib an LC–MS/MS method was developed to detect the primary carboxylic acid metabolite, resulting from methylester cleavage, in plasma and tumors, because this metabolite is postulated to be important for nintedanib efficacy. LC–MS/MS was also explored to assess the metabolic fate of [ 11 C]axitinib in vivo, since axitinib has an isomerizable double bond. Results: [ 11 C]axitinib and [ 11 C]nintedanib were successfully synthesized with 10.5 ± 2.6% and 25.6 ± 3.3% radiochemical yield (corrected for decay), respectively. Biodistribution studies only demonstrated tumor uptake of [ 11 C]nintedanib in FaDu xenografts of 1.66 ± 0.02% ID/g at 60 min p.i. In vivo stability analysis of [ 11 C]axitinib at 45 min p.i. revealed the formation of predominantly non-polar metabolites (36.6 ± 6.8% vs 47.1 ± 8.4% of parent tracer and 16.3 ± 2.1% of polar metabolites), while for [ 11 C]nintedanib mostly polar metabolites were found (70.9 ± 4.1 vs 26.7 ± 3.9% of parent tracer and only 2.4 ± 1.6 of a non-polar metabolites). No isomerization of [ 11 C]axtinib was observed in vivo; however, a sulfoxide metabolite could be detected using LC–MS/MS. For [ 11 C]nintedanib, LC–MS/MS revealed formation of the reported primary carboxylic acid metabolite when in vitro plasma incubations were performed

Elevated Steroid Hormone Production in the db/db Mouse Model of Obesity and Type 2 Diabetes.

Science.gov (United States)

Hofmann, Anja; Peitzsch, Mirko; Brunssen, Coy; Mittag, Jennifer; Jannasch, Annett; Frenzel, Annika; Brown, Nicholas; Weldon, Steven M; Eisenhofer, Graeme; Bornstein, Stefan R; Morawietz, Henning

2017-01-01

Obesity and type 2 diabetes have become a major public health problem worldwide. Steroid hormone dysfunction appears to be linked to development of obesity and type 2 diabetes and correction of steroid abnormalities may offer new approaches to therapy. We therefore analyzed plasma steroids in 15-16 week old obese and diabetic db/db mice using liquid chromatography-tandem mass spectrometry. Lean db/+ served as controls. Db/db mice developed obesity, hyperglycemia, hyperleptinemia, and hyperlipidemia. Hepatic triglyceride storage was increased and adiponectin and pancreatic insulin were lowered. Aldosterone, corticosterone, 11-deoxycorticosterone, and progesterone were respectively increased by 3.6-, 2.9-, 3.4, and 1.7-fold in db/db mice compared to controls. Ratios of aldosterone-to-progesterone and corticosterone-to-progesterone were respectively 2.0- and 1.5-fold higher in db/db mice. Genes associated with steroidogenesis were quantified in the adrenal glands and gonadal adipose tissues. In adrenals, Cyp11b2 , Cyp11b1 , Cyp21a1 , Hsd3b1 , Cyp11a1 , and StAR were all significantly increased in db/db mice compared with db/+ controls. In adipose tissue, no Cyp11b2 or Cyp11b1 transcripts were detected and no differences in Cyp21a1 , Hsd3b1 , Cyp11a1 , or StAR expression were found between db/+ and db/db mice. In conclusion, the present study showed an elevated steroid hormone production and adrenal steroidogenesis in the db/db model of obesity and type 2 diabetes. © Georg Thieme Verlag KG Stuttgart · New York.

Cycling of 7Be and 210Pb in a high DOC, shallow, turbid estuary of south-east Texas

International Nuclear Information System (INIS)

Baskaran, M.; Ravichandran, M.; Bianchi, T.S.

1997-01-01

The Sabine-Neches estuary is a shallow, turbid estuary in south-east Texas with high concentrations of dissolved organic carbon (DOC). The sediment inventory of 210 Pb and 239 , 240 Pu indicates that only a fraction of the particle-associated nuclides that reach the estuary were retained in the sediment. To better understand the cause for this low-sediment inventory of particle-reactive nuclides, 7 Be and 210 Pb concentrations have been measured in the dissolved and particulate phases, in addition to the DOC and suspended particle concentrations. The ratios of dissolved to particulate concentrations of 7 Be and 210 Pb were generally higher than in most other coastal waters. The dissolved residence times of 7 Be and 210 Pb (accounting for riverine input) varied between 0.6 and 9.6 days and 1.7 and 9.8 days, respectively. Distribution coefficients (Kd) ranged between 1500 and 87 100 cm 3 g -1 for 7 Be and 2600 and 37 000 cm 3 g -1 for 210 Pb. These K d s are lower than those reported for most coastal waters. There was no significant correlation between suspended particle concentration and K d of either 7 Be and 210 Pb; this has been observed for many other particle-reactive nuclides, suggesting that particle is not the primary controlling variable for the removal of particle-reactive nuclides in these high DOC waters. The average particle residence time in this estuary is ∼ 2 days. The relatively low K d values, longer dissolved residence times of 7 Be and 210 Pb, longer particle residence times and shorter hydraulic residence times compared to other coastal areas, result in only a partial removal of particle-reactive radionuclides in this estuary. (author)

Dissolved organic carbon (DOC) in soil extracts investigated by FT-ICR-MS

Science.gov (United States)

Hofmann, D.; Steffen, D.; Jablonowski, N. D.; Burauel, P.

2012-04-01

Soil drying and rewetting usually increases the release of xenobiotics like pesticides present in agricultural soils. Besides the effect on the release of two aged 14C-labeled pesticide residues we focus on the characterisation of simultaneously remobilized dissolved organic carbon (DOC) to gain new insights into structure and stability aspects of soil organic carbon fractions. The test soil (gleyic cambisol; Corg 1.2%, pH 7.2) was obtained from the upper soil layer of two individual outdoor lysimeter studies containing either environmentally long-term aged 14C residues of the herbicide ethidimuron (0-10 cm depth; time of aging: 9 years) or methabenzthiazuron (0-30 cm depth; time of aging: 17 years). Soil samples (10 g dry soil equivalents) were (A=dry/wet) previously dried (45°C) or (B=wet/wet) directly mixed with pure water (1+2, w:w), shaken (150 rpm, 1 h), and centrifuged (2000 g). This extraction procedure was repeated several individual times, for both setups. The first three individual extractions, respectively were used for further investigations. Salt was removed from samples prior analysis because of a possible quench effect in the electrospray (ESI) source by solid phase extraction (SPE) with Chromabond C18 Hydra-cartridges (Macherey-Nagel) and methanol as backextraction solvent. The so preconcentrated and desalted samples were introduced by flow injection analysis (FIA) in a fourier transform ion cyclotron resonance mass spectrometer (FT-ICR-MS), equipped with an ESI source and a 7 T supra-conducting magnet (LTQ-FT Ultra, ThermoFisher Scientific). This technique is the key technique for complex natural systems attributed by their outstanding mass resolution (used 400.000 at m/z 400 Da) and mass accuracy (≤ 1ppm) by simultaneously providing molecular level details of thousands of compounds and was successful applied for the investigations of natural organic matter (NOM) different sources like marine and surface water, soil, sediment, bog and crude oil

Influence of DOC on the inactivation efficacy of ozonation assessed with Clostridium perfringens and a lab-scale continuous flow system

NARCIS (Netherlands)

Hijnen, W.A.M.; Medema, Gerriet Jan; Baars, E.; Bosklopper, T.G.J.; Veer, A.J. van der; Meijers, R.T.

2004-01-01

Routine quality monitoring for fecal indicators after ozonation at the river-lake waterworks Weesperkarspel of Amsterdam Water Supply (AWS) show large variation in inactivation. The influence of the high DOC in the water on the inactivation efficiency was investigated. Results showed a higher

Survival of brown trout during spring flood in DOC-rich streams in northern Sweden: the effect of present acid deposition and modelled pre-industrial water quality

International Nuclear Information System (INIS)

Laudon, Hjalmar; Poleo, Antonio B.S.; Voellestad, Leif Asbjoern; Bishop, Kevin

2005-01-01

Mortality and physiological responses in brown trout (Salmo trutta) were studied during spring snow melt in six streams in northern Sweden that differed in concentrations of dissolved organic carbon (DOC) and pH declines. Data from these streams were used to create an empirical model for predicting fish responses (mortality and physiological disturbances) in DOC-rich streams using readily accessible water chemistry parameters. The results suggest that fish in these systems can tolerate higher acidity and inorganic aluminium levels than fish in low DOC streams. But even with the relatively low contemporary deposition load, anthropogenic deposition can cause fish mortality in the most acid-sensitive surface waters in northern Sweden during spring flood. However, the results suggests that it is only in streams with high levels of organically complexed aluminium in combination with a natural pH decline to below 5.0 during the spring where current sulphur deposition can cause irreversible damage to brown trout in the region. This study support earlier studies suggesting that DOC has an ameliorating effect on physiological disturbances in humic waters but the study also shows that surviving fish recover physiologically when the water quality returns to less toxic conditions following a toxic high flow period. The physiological response under natural, pre-industrial conditions was also estimated. - High levels of complexed aluminum, at pH levels below 5.0, predisposes brown trout to sulfur-caused damage in the spring

Survival of brown trout during spring flood in DOC-rich streams in northern Sweden: the effect of present acid deposition and modelled pre-industrial water quality

Energy Technology Data Exchange (ETDEWEB)

Laudon, Hjalmar [Department of Forest Ecology, Swedish University of Agricultural Sciences, SE-901 83 Umeaa (Sweden)]. E-mail: hjalmar.laudon@sek.slu.se; Poleo, Antonio B.S. [Department of Biology, University of Oslo, P.O. Box 1066 Blindern, N-0316 Oslo (Norway); Voellestad, Leif Asbjoern [Department of Biology, University of Oslo, P.O. Box 1066 Blindern, N-0316 Oslo (Norway); Bishop, Kevin [Department of Environmental Assessment, Swedish University of Agricultural Sciences, SE-750 07 Uppsala (Sweden)

2005-05-01

Mortality and physiological responses in brown trout (Salmo trutta) were studied during spring snow melt in six streams in northern Sweden that differed in concentrations of dissolved organic carbon (DOC) and pH declines. Data from these streams were used to create an empirical model for predicting fish responses (mortality and physiological disturbances) in DOC-rich streams using readily accessible water chemistry parameters. The results suggest that fish in these systems can tolerate higher acidity and inorganic aluminium levels than fish in low DOC streams. But even with the relatively low contemporary deposition load, anthropogenic deposition can cause fish mortality in the most acid-sensitive surface waters in northern Sweden during spring flood. However, the results suggests that it is only in streams with high levels of organically complexed aluminium in combination with a natural pH decline to below 5.0 during the spring where current sulphur deposition can cause irreversible damage to brown trout in the region. This study support earlier studies suggesting that DOC has an ameliorating effect on physiological disturbances in humic waters but the study also shows that surviving fish recover physiologically when the water quality returns to less toxic conditions following a toxic high flow period. The physiological response under natural, pre-industrial conditions was also estimated. - High levels of complexed aluminum, at pH levels below 5.0, predisposes brown trout to sulfur-caused damage in the spring.

Reaction of PFCs in water stabilized plasma

Czech Academy of Sciences Publication Activity Database

Mastný, L.; Horníček, J.; Živný, Oldřich; Brožek, Vlastimil; Sember, Viktor

2017-01-01

Roč. 13, č. 1 (2017), s. 161 ISSN 1336-7242. [Zjazd chemikov /69./. 11.09.2017-15.09.2017, Horný Smokovec] R&D Projects: GA ČR(CZ) GC17-10246J Institutional support: RVO:61389021 Keywords : Water stabilized plasma * tetrafluoromethane * corrosion resistance * boron nitride * titanium nitride Subject RIV: BL - Plasma and Gas Discharge Physics OBOR OECD: Fluids and plasma physics (including surface physics)

11th AINSE Plasma Physics Conference 1977, 7th and 8th February, 1977, Lucas Heights, NSW (Australia), 9th February, 1977, University of Sydney. Abstracts of Papers 1-54

Energy Technology Data Exchange (ETDEWEB)

Walsh, C. J. [ed.

1977-02-15

Abstracts of papers 1-54 scheduled for oral presentation at the 11th AINSE Plasma Physics Conference are included. No introductory or summary information is provided. Each page consists of the title, authors, organization affiliation, and abstract.

Dynamics of the edge transport barrier at plasma biasing on the CASTOR tokamak

Czech Academy of Sciences Publication Activity Database

Stöckel, Jan; Spolaore, M.; Peleman, P.; Brotánková, Jana; Horáček, Jan; Dejarnac, Renaud; Devynck, P.; Ďuran, Ivan; Gunn, J. P.; Hron, Martin; Kocan, M.; Martines, E.; Pánek, Radomír; Sharma, A.; Van Oost, G.

2006-01-01

Roč. 12, č. 6 (2006), s. 19-23 ISSN 1562-6016. [International Conference on Plasma Physics and Technology/11th./. Alushta, 11.9.2006-16.9.2006] Institutional research plan: CEZ:AV0Z20430508 Keywords : tokamak * plasma * transport barrier * relaxations Subject RIV: BL - Plasma and Gas Discharge Physics http:// vant .kipt.kharkov.ua/TABFRAME.html

Effect of antenna capacitance on the plasma characteristics of an internal linear inductively coupled plasma system

International Nuclear Information System (INIS)

Lim, Jong Hyeuk; Kim, Kyong Nam; Park, Jung Kyun; Yeom, Geun Young

2008-01-01

This study examined the effect of the antenna capacitance of an inductively coupled plasma (ICP) source, which was varied using an internal linear antenna, on the electrical and plasma characteristics of the ICP source. The inductive coupling at a given rf current increased with decreasing antenna capacitance. This was caused by a decrease in the inner copper diameter of the antenna made from coaxial copper/quartz tubing, which resulted in a higher plasma density and lower plasma potential. By decreasing the diameter of the copper tube from 25 to 10 mm, the plasma density of a plasma source size of 2750x2350 mm 2 was increased from approximately 8x10 10 /cm 3 to 1.5x10 11 /cm 3 at 15 mTorr Ar and 9 kW of rf power

Hepatic metabolism of 11C-methionine and secretion of 11C-protein measured by PET in pigs

DEFF Research Database (Denmark)

Horsager, Jacob; Lausten, Susanne Bach; Bender, Dirk

2017-01-01

Hepatic amino acid metabolism and protein secretion are essential liver functions that may be altered during metabolic stress, e.g. after surgery. We wished to develop a dynamic liver PET method using the radiolabeled amino acid 11C-methionine to examine this question. Eleven 40-kg pigs were...... allocated to either laparotomy or pneumoperitoneum. 24 hours after surgery a 70-min dynamic PET scanning of the liver with arterial blood sampling was performed immediately after intravenous injection of 11C-methionine. Time course of arterial plasma 11C-methionine concentration was used as input function...

The role of COMT and plasma proline in the variable penetrance of autistic spectrum symptoms in 22q11.2 deletion syndrome.

Science.gov (United States)

Hidding, E; Swaab, H; de Sonneville, L M J; van Engeland, H; Vorstman, J A S

2016-11-01

This paper examines how COMT 158 genotypes and plasma proline levels are associated with variable penetrance of social behavioural and social cognitive problems in 22q11.2 deletion syndrome (22q11DS). Severity of autistic spectrum symptoms of 45 participants with 22q11DS was assessed using the Autism Diagnostic Interview Revised. Face and facial emotion recognition was evaluated using standardized computer-based test-paradigms. Associations with COMT 158 genotypes and proline levels were examined. High proline levels and poor face recognition in individuals with the COMT MET allele, and poor facial emotion recognition, explained almost 50% of the variance in severity of autism symptomatology in individuals with 22q11DS. High proline levels and a decreased capacity to break down dopamine as a result of the COMT MET variant are both relevant in the expression of the social phenotype in patients. This epistatic interaction effect between the COMT 158 genotype and proline on the expression of social deficits in 22q11DS shows how factors other than the direct effects of the deletion itself can modulate the penetrance of associated cognitive and behavioural outcomes. These findings are not only relevant to our insight into 22q11DS, but also provide a model to better understand the phenomenon of variable penetrance in other pathogenic genetic variants. © 2016 John Wiley & Sons A/S. Published by John Wiley & Sons Ltd.

A PLS-based extractive spectrophotometric method for simultaneous determination of carbamazepine and carbamazepine-10,11-epoxide in plasma and comparison with HPLC

Science.gov (United States)

Hemmateenejad, Bahram; Rezaei, Zahra; Khabnadideh, Soghra; Saffari, Maryam

2007-11-01

Carbamazepine (CBZ) undergoes enzyme biotransformation through epoxidation with the formation of its metabolite, carbamazepine-10,11-epoxide (CBZE). A simple chemometrics-assisted spectrophotometric method has been proposed for simultaneous determination of CBZ and CBZE in plasma. A liquid extraction procedure was operated to separate the analytes from plasma, and the UV absorbance spectra of the resultant solutions were subjected to partial least squares (PLS) regression. The optimum number of PLS latent variables was selected according to the PRESS values of leave-one-out cross-validation. A HPLC method was also employed for comparison. The respective mean recoveries for analysis of CBZ and CBZE in synthetic mixtures were 102.57 (±0.25)% and 103.00 (±0.09)% for PLS and 99.40 (±0.15)% and 102.20 (±0.02)%. The concentrations of CBZ and CBZE were also determined in five patients using the PLS and HPLC methods. The results showed that the data obtained by PLS were comparable with those obtained by HPLC method.

Paving the Road for Student Success: Building a Case for Integrated Strategic Planning from Pre-K to Post-Doc

Science.gov (United States)

Kealey, Jarrett; Peterson, Renee; Thompson, Angela; Waters, Kristin

2015-01-01

The road from prekindergarten (pre-K) to post-doctoral (post-doc) work is riddled with potholes, detours, u-turns, and construction zones. National education initiatives such as No Child Left Behind, the Common Core, Race to the Top, Performance-Based Funding, College Readiness and Completion Acts, and Post-Graduate Gainful Employment Reports…

Tracing river runoff and DOC over the East Siberian Shelf using in situ CDOM measurements

Science.gov (United States)

Pugach, Svetlana; Semiletov, Igor; Pipko, Irina

2010-05-01

The Great Siberian Rivers integrate meteorological and hydrological changes in their watersheds and play a significant role in the physical and biogeochemical regime of the Arctic Ocean through transport of fresh water (FW) and carbon into the sea. Since 1994, the Laboratory of Arctic Research POI in cooperation with the IARC UAF investigate the fresh water and carbon fluxes in the Siberian Arctic land-shelf system with the special emphasize in the East Siberian Arctic shelf (ESAS) which represents the widest and shallowest continental shelf in the World Ocean, yet it is still poorly explored. The East Siberian Sea is influenced by water exchange from the eastern Laptev Sea (where local shelf waters are diluted mostly by Lena River discharge) and by inflow of Pacific waters from the Chukchi Sea. This region is characterized by the highest rate of coastal erosion and significant volume of the riverine discharge and exhibits the largest gradients in all oceanographic parameters observed for the entire Arctic Ocean. Here we demonstrate a connection among Chromophoric (or Colored) Dissolved Organic Matter (CDOM) which represents the colored fraction of Dissolved Organic Carbon (DOC), salinity, and pCO2. Our data have documented strong linear correlations between salinity and CDOM in the near shore zone strongly influenced by riverine runoff. Correlation coefficient between CDOM and salinity in surface waters was equal to -0.94, -0.94 and -0.95 for surface water stations in September of 2003, 2004, and 2005, respectively. Combined analysis of CDOM and DOC data demonstrated a high degree of correlation between these parameters (r=0.96). Such close connection between these characteristics of waters in this region makes it possible to restore the distribution of DOC according to our original CDOM data of the profiling systems, such as CTD-Seabird equipped by WETStar CDOM fluorimeter. It is shown that the CDOM can be used as a conservative tracer to follow the transport and

Diuretic effect of compounds from Hibiscus sabdariffa by modulation of the aldosterone activity.

Science.gov (United States)

Jiménez-Ferrer, Enrique; Alarcón-Alonso, Javier; Aguilar-Rojas, Arturo; Zamilpa, Alejandro; Jiménez-Ferrer C, Itzia; Tortoriello, Jaime; Herrera-Ruiz, Maribel

2012-12-01

Recent studies of Hibiscus sabdariffa Linn. have demonstrated that it presents diuretic, natriuretic, and potassium sparing effects. However, the mechanism that induces these effects has not yet been elucidated. The aim of this study was to explore the possible mechanism of action for the diuretic effect of Hibiscus sabdariffa extract and its fractions.The aqueous extract from this plant and the fractions obtained with solvents of different polarities were administered to adrenalectomized rats, and the diuretic effect was measured in the presence of deoxycorticosterone acetate (aldosterone analog).The effect on renal filtration was also evaluated in an in situ kidney model, and finally, the effect of diuretic active extracts on gene expression of the alpha subunit from the transporter (αENaC) of renal epithelial cell was quantified. The subsequent results were obtained: The aqueous extract of Hibiscus sabdariffa presented the following chemical composition, 32.4 mg/g delphinidin-3-O-sambubioside, 11.5 mg/g cyanidin-3-O-sambubioside, 11.5 mg/g quercetin, and chlorogenic acid 2.7 mg/g. The concentration of anthocyanins was diminished until disappearance due to decrease of the polarity of the solvents used in the extraction process, in contrast to the flavonoids and chlorogenic acid, which had their concentration increased. The diuretic effect caused by adrenalectomy in rats was reversed by deoxycorticosterone acetate activity. However, the effect of deoxycorticosterone acetate was antagonized by spironolactone, the aqueous extract of Hibiscus sabdariffa, and the acetonitrile : methanol 5 : 5 mixture extract, administered orally. A similar effect was observed on renal filtration obtained from the isolated kidney model.When the gene expression levels of αENaC was measured in adrenalectomized rats, it was observed that spironolactone, the aqueous extract of Hibiscus sabdariffa, the acetonitrile : methanol 5 : 5 mixture, as well as the

Sensitive radioimmunoassay for plasma arginine vasopressin

International Nuclear Information System (INIS)

Thibonnier, M.; Soto, M.E.; Corvol, P.; Milliez, P.; Marchetti, J.; Menard, J.

1980-01-01

Using an ion exchange resin, a sensitive radioimmunoassay for plasma arginine vasopressin (AVP) was developed. This assay was characterized by the absence of blank values, an excellent recovery rate, great sensitivity (0.1 pg of AVP was significantly detected) and reproducibility. In 8 normal men, plasma AVP after overnight dehydration was 1.57+-0.17 pg/ml, and dropped to 0.58+-0.11 pg/ml after 20 ml/kg oral water loading. Significant correlations between plasma AVP levels and plasma or urinary osmolality confirm the validity of this assay. In complete pituitary diabetes insipidus (n=4) plasma AVP was undetectable whereas it was frankly increased in Schwartz-Bartter syndrome (3 to 33 pg/ml, n=8) [fr

Creating Space Plasma from the Ground

Science.gov (United States)

2016-05-12

AFRL-AFOSR-VA-TR-2016-0179 CREATING SPACE PLASMA FROM THE GROUND Herbert C Carlson UTAH STATE UNIVERSITY Final Report 05/12/2016 DISTRIBUTION A...DATE (DD-MM-YYYY) 05/14/2016 2. REPORT TYPE Final 3. DATES COVERED (From - To) 08/14/2012-05/14/2016 4. TITLE AND SUBTITLE Creating space plasma from...Report (2016) Creating Space Plasma from the Ground Grant FA9550-11-1-0236 AFOSR Program Manager Dr. Kent Miller PI: Herbert C. Carlson Center for

Association of SLC11A1 gene polymorphism with caprine ...

Indian Academy of Sciences (India)

Navya

2017-01-16

Jan 16, 2017 ... RESEARCH ARTICLE. Evaluation of the ..... Nramp2 (Slc11a2) expressed at the plasma membrane. Blood, 102 ... Received 21 November 2016, in final revised form 11 January 2017; accepted 12 January 2017. Unedited ...

Conference on atomic processes in high temperature plasmas: a topical conference of the American Physical Society Division of Plasma Physics

International Nuclear Information System (INIS)

1977-01-01

Abstracts are included for approximately 100 of the papers presented at the meeting. The following sessions were held at the conference: (1) electron ionization and excitation rates, (2) radiation from low density plasmas, (3) electron-ion cross sections and rates, (4) oscillator strengths and atomic structure, (5) spectroscopy and atomic structure, (6) astrophysical plasmas, (7) particle transport, (8) ion-atom cross sections and rates, (9) wall effects in laboratory plasmas, (10) spectroscopy and photoionization, and (11) radiation from high density plasmas

Plasma input function determination for PET using a commercial laboratory robot

International Nuclear Information System (INIS)

Alexoff, David L.; Shea, Colleen; Fowler, Joanna S.; King, Payton; Gatley, S. John; Schlyer, David J.; Wolf, Alfred P.

1995-01-01

A commercial laboratory robot system (Zymate PyTechnology II Laboratory Automation System) was interfaced to standard and custom laboratory equipment and programmed to perform rapid radiochemical assays necessary for plasma input function determination in quantitative PET studies in humans and baboons. A Zymark XP robot arm was used to carry out two assays: (1) the determination of total plasma radioactivity concentrations in a series of small-volume whole blood samples and (2) the determination of unchanged (parent) radiotracer in plasma using only solid phase extraction methods. Steady state robotic throughput for determination of total plasma radioactivity in whole blood samples (0.350 mL) is 14.3 samples/h, which includes automated centrifugation, pipetting, weighing and radioactivity counting. Robotic throughput for the assay of parent radiotracer in plasma is 4-6 samples/h depending on the radiotracer. Percents of total radioactivities present as parent radiotracers at 60 min. postinjection of 25 ± 5.0 (N 25), 26 ± 6.8 (N = 68), 13 ± 4.4 (N = 30), 32 ± 7.2 (N = 18), 16 ± 4.9 (N = 20), were obtained for carbon-11 labeled benztropine, raclopride, methylphenidate, SR 46349B (trans, 4-[(3Z)3-(2-dimethylamino-ethyl) oxyimino-3 (2-fluorophenyl)propen-1-yl]phenol), and cocaine respectively in baboon plasma and 84 ± 6.4 (N = 9), 18 ± 11 (N = 10), 74 ± 5.7 (N = 118) and 16 ± 3.7 (N = 18) for carbon-11 labeled benztropine, deprenyl, raclopride, and methylphenidate respectively in human plasma. The automated system has been used for more than 4 years for all plasma analyses for 7 different C-11 labeled compounds used routinely in our laboratory. The robotic radiotracer assay runs unattended and includes automated cleanup procedures that eliminates all human contact with plasma-contaminated containers

A DOC coagulant, gypsum treatment can simultaneously reduce As, Cd and Pb uptake by medicinal plants grown in contaminated soil.

Science.gov (United States)

Kim, Hyuck Soo; Seo, Byoung-Hwan; Kuppusamy, Saranya; Lee, Yong Bok; Lee, Jae-Hwang; Yang, Jae-E; Owens, Gary; Kim, Kwon-Rae

2018-02-01

The efficiency of gypsum, as a dissolved organic carbon (DOC) coagulator, for the simultaneous immobilization of two heavy metals (Cd and Pb) and one metalloid (As) in agricultural soils near an abandoned mining site was examined. The agricultural soil was defined as long-term contaminated as As (1540mgkg -1 ), Cd (55mgkg -1 ) and Pb (1283mgkg -1 ) concentrations exceeded the Korean guideline values for As (25mgkg -1 ), Cd (4mgkg -1 ), and Pb (200mgkg -1 ). Gypsum was incorporated into the contaminated soil at 3% (w/w). In comparison two commonly using immobilizing agents (lime and compost), together with a mixture (lime+gypsum) were also included in the pot trial for the cultivation of two medical plants (A. gigas and A. macrocephala) and to evaluate the effectiveness of gypsum on As, Cd and Pb immobilization. The results showed that even though pH change-induced immobilizing agents such as lime were more effective than gypsum at immobilizing Cd and Pb, addition of gypsum also effectively reduced heavy metal phytoavailability as indicated by decreases in the concentration of Cd and Pb in medicinal plants. Furthermore, gypsum and gypsum+ lime were also most effective in reducing As concentrations in both plants studied. This was mainly attributed to significant decreases in soil DOC (48-64%) when gypsum and gypsum+lime were applied to the soil. Consequently, it was concluded that enhanced DOC coagulation with gypsum, could be considered as a promising technique for the immobilization of both metals (Cd and Pb) and metalloids (As) in agricultural soils. Copyright © 2017 Elsevier Inc. All rights reserved.

Using fluorescence spectroscopy to gain new insights into seasonal patterns of stream DOC concentrations in an alpine, headwater catchment underlain by discontinuous permafrost in Wolf Creek Research Basin, Yukon Territory, Canada

Science.gov (United States)

Shatilla, N. J.; Carey, S.; Tang, W.

2017-12-01

The Canadian subarctic is experiencing rapid climate warming resulting in decreased depth and duration of snowcover, decreased permafrost extent and time span of seasonal frozen ground resulting in increased active layer depth, and increased frequency and magnitude of rainfall events during the growing season. These changes challenge our conceptual models of permafrost hydrology as comparisons between recent and historical streamflow records show an emerging secondary post-freshet peak in flow in recent years along with enhanced winter flows. Long-term monitoring of Granger Creek (7.6km2), an alpine watershed underlain by discontinuous permafrost located within Wolf Creek Research Basin (176km2) in Yukon Territory, Canada provided a multi-decadal record of hydro-meteorological measurements. Granger Creek experienced warmer and wetter summers in 2015-6 compared to 2001-8, and an altered streamflow pattern with an earlier spring freshet and peak in dissolved organic carbon (DOC) concentrations. DOC concentrations post-freshet remained low at both the headwater and meso-catchment scale, which contradicts trends of increasing DOC concentrations observed in larger river systems. Hysteresis loops of sub-hourly measurements of streamflow, salinity and chromophoric dissolved organic matter (CDOM) were analyzed to provide new insights into how hydrological connectivity at the headwater scale affected the timing of solute release with supporting information from optical indices calculated from fluorescence spectroscopy. These indices provided a more nuanced view of catchment dynamics than the DOC concentrations. The composition and quality of DOM varied throughout the growing season with the delivery of older, terrestrially-derived material corresponding to high DOC concentrations at the onset of spring freshet when the catchment was initially being flushed. The origin and quality of stream DOM shifted throughout the rest of the season to newer, more easily mobilized DOM

Dutch Translation and Psychometric Testing of the 9-Item Shared Decision Making Questionnaire (SDM-Q-9) and Shared Decision Making Questionnaire-Physician Version (SDM-Q-Doc) in Primary and Secondary Care.

Science.gov (United States)

Rodenburg-Vandenbussche, Sumayah; Pieterse, Arwen H; Kroonenberg, Pieter M; Scholl, Isabelle; van der Weijden, Trudy; Luyten, Gre P M; Kruitwagen, Roy F P M; den Ouden, Henk; Carlier, Ingrid V E; van Vliet, Irene M; Zitman, Frans G; Stiggelbout, Anne M

2015-01-01

The SDM-Q-9 and SDM-Q-Doc measure patient and physician perception of the extent of shared decision making (SDM) during a physician-patient consultation. So far, no self-report instrument for SDM was available in Dutch, and validation of the scales in other languages has been limited. The aim of this study was to translate both scales into Dutch and assess their psychometric characteristics. Participants were patients and their treating physicians (general practitioners and medical specialists). Patients (N = 182) rated their consultation using the SDM-Q-9, 43 physicians rated their consultations using the SDM-Q-Doc (N = 201). Acceptability, reliability (internal consistency), and the factorial structure of the instruments were determined. For convergent validity the CPSpost was used. Reliabilities of both scales were high (alpha SDM-Q-9 0.88; SDM-Q-Doc 0.87). The SDM-Q-9 and SDM-Q-Doc total scores correlated as expected with the CPSpost (SDM-Q-9: r = 0.29; SDM-Q-Doc: r = 0.48) and were significantly different between the CPSpost categories, with lowest mean scores when the physician made the decision alone. Principal Component Analyses showed a two-component model for each scale. A confirmatory factor analysis yielded a mediocre, but acceptable, one-factor model, if Item 1 was excluded; for both scales the best indices of fit were obtained for a one-factor solution, if both Items 1 and 9 were excluded. The Dutch SDM-Q-9 and SDM-Q-Doc demonstrate good acceptance and reliability; they correlated as expected with the CPSpost and are suitable for use in Dutch primary and specialised care. Although the best model fit was found when excluding Items 1 and 9, we believe these items address important aspects of SDM. Therefore, also based on the coherence with theory and comparability with other studies, we suggest keeping all nine items of the scale. Further research on the SDM-concept in patients and physicians, in different clinical settings and different countries, is

1179-1187suppl.doc

Indian Academy of Sciences (India)

2.11 Application: Dynamic adsorption 8 ... Surface area was determined using N2 adsorption at 77 K using Micromeritics ASAP 2020 surface analyzer . .... A SETSYS TGA-DTA 10 instrument was used to determine the thermal degradation and stability behaviour of BC, CTS/BC, CTS/BC/PMAA under air using Al2O3 crucible ...

Influence of non-equilibrium effects on plasma property functions in hybrid water-argon plasma torch

Czech Academy of Sciences Publication Activity Database

Křenek, Petr; Hrabovský, Milan

2010-01-01

Roč. 14, 1-2 (2010), s. 95-100 ISSN 1093-3611. [European High Temperature Plasma Processes (HTPP)/10th./. Patras (Patras University), 07.07.2008-11.07.2008] R&D Projects: GA ČR GA202/08/1084 Institutional research plan: CEZ:AV0Z20430508 Keywords : Thermal plasma * material properties * non-equlibrium phenomena * dc arc torch Subject RIV: BL - Plasma and Gas Discharge Physics Impact factor: 0.189, year: 2010 http://www.begellhouse.com/journals/57d172397126f956,227c67f42b79464a,5bbc4c7760b4b6cb.html

LDA measurements under plasma conditions

International Nuclear Information System (INIS)

Lesinski, J.; Mizera-Lesinska, B.; Fanton, J.C.; Boulos, M.I.

1979-01-01

A study was made of the application of Laser Doppler Anemometry (LDA) for the measurement of the fluid and particle velocities under plasma conditions. The flow configuration, is that of a dc plasma jet called the principal jet, in which an alumina powder of a mean particle diameter of 115 μm and a standard deviation of 11.3 μm was injected using a secondary jet. The plasma jet immerged from a 7.1 mm ID nozzle while that of the secondary jet was 2 nm in diameter. The secondary jet was introduced at the nozzle level of the plasma jet directed 90 0 to its axis. Details of the nozzle and the gas flow system are shown in Figure 2

Development of plasma diagnostics technologies - Measurement of transport= parameters in tokamak edge plasma by using electric transport probes

Energy Technology Data Exchange (ETDEWEB)

Chung, Kyu Sun; Chang, Do Hee; Sim, Yeon Gun; Kim, Jin Hee [Hanyang University, Seoul (Korea, Republic of)

1995-08-01

Electric transport probe system is developed for the measurement of electron temperature, floating potential, plasma density and flow velocity of= edge plasmas in the KT-2 medium size tokamak. Experiments have been performed in KT-1 small size tokamak. Electric transport probe is composed of a single probe(SP) and a Mach probe (MP). SP is used for the measurements of electron density, floating potential, and plasma density and measured values are {approx} 3*10{sup 11}/cm{sup -3}, -20 volts, 15 {approx} 25 eV. For the most discharges, respectively. MP is for the measurements of toroidal(M{sub T}) and poloidal(M{sub P}) flow velocities, and density, which are M{sub T} {approx_equal} .0.85, M{sub P} {approx_equal}. 0.17, n. {approx_equal} 2.1*10{sup 11} cm{sup -3}, respectively. A triple probe is also developed for the direct reading of T{sub e} and n{sub e}, and is used for DC, RF, and RF+DC plasma in APL of Hanyang university. 38 refs., 36 figs. (author)

2XIIB plasma confinement experiments

International Nuclear Information System (INIS)

Coensgen, F.H.; Clauser, J.F.; Correll, D.L.

1976-01-01

This paper reports results of 2XIIB neutral-beam injection experiments with plasma-stream stabilization. The plasma stream is provided either by a pulsed plasma generator located on the field lines outside the plasma region or by ionization of neutral gas introduced at the mirror throat. In the latter case, the gas is ionized by the normal particle flux through the magnetic mirror. A method of plasma startup and sustenance in a steady-state magnetic field is reported in which the plasma stream from the pulsed plasma generator serves as the initial target for the neutral beams. After an energetic plasma of sufficient density is established, the plasma generator stream is replaced by the gas-fed stream. Lifetimes of the stabilized plasma increase with plasma temperature in agreement with the plasma stabilization of the drift-cyclotron loss-cone mode. The following plasma parameters are attained using the pulsed plasma generator for stabilization: n approximately 5 x 10 13 cm -3 , anti W/sub i/ approximately 13 keV, T/sub e/ = 140 eV, and ntau/sub p/ approximately 7 x 10 10 cm -3 .s. With the gas feed, the mean deuterium ion energy is 9 keV and the peak density n approximately 10 14 cm -3 . In the latter case, the energy confinement parameter reaches ntau/sub E/ = 7 x 10 10 cm -3 .s, and the particle confinement parameter reaches ntau/sub p/ = 1 x 10 11 cm -3 .s

Steam Plasma Flows Generated in Gerdien Arc: Environment for Energy Gas Production from Organics and for Surface Coatings

Czech Academy of Sciences Publication Activity Database

Hrabovský, Milan

2011-01-01

Roč. 6, č. 5 (2011), s. 792-801 ISSN 1880-5558. [Seventh International Conference on Flow Dynamics. Sendai, 01.11.2010-03.11.2010] R&D Projects: GA ČR GAP205/11/2070 Institutional research plan: CEZ:AV0Z20430508 Keywords : Thermal Plasma * Dc Arc Plasma Torch * Gerdien Arc * Plasma Gasification Subject RIV: BL - Plasma and Gas Discharge Physics http://www.jstage.jst.go.jp/article/jfst/6/5/792/_pdf

Validation of Reported Whole-Grain Intake from a Web-Based Dietary Record against Plasma Alkylresorcinol Concentrations in 8- to 11-Year-Olds Participating in a Randomized Controlled Trial

DEFF Research Database (Denmark)

Biltoft-Jensen, Anja Pia; Damsgaard, Camilla T.; W. Andersen, Elisabeth

2016-01-01

meal × 3 mo crossover trial. Reported WG intake and plasma AR concentrations were compared when children ate their usual bread-based lunch (UBL) and when served a hot lunch meal (HLM). Correlations and cross-classification were used to rank subjects according to intake. The intraclass correlation......BACKGROUND: Whole-grain (WG) intake is important for human health, but accurate intake estimation is challenging. Use of a biomarker for WG intake provides a possible way to validate dietary assessment methods. OBJECTIVE: Our aim was to validate WG intake from 2 diets reported by children, using...... plasma alkylresorcinol (AR) concentrations, and to investigate the 3-mo reproducibility of AR concentrations and reported WG intake. METHODS: AR concentrations were analyzed in fasting blood plasma samples, and WG intake was estimated in a 7-d web-based diary by 750 participants aged 8-11 y in a 2 school...

EDITORIAL: Plasma jets and plasma bullets Plasma jets and plasma bullets

Science.gov (United States)

Kong, M. G.; Ganguly, B. N.; Hicks, R. F.

2012-06-01

technological solution in the early to late 1990s of confining atmospheric plasmas in a small volume of plasma generation (i.e. with a small volume-to-surface ratio) and then extending it towards a downstream sample [7]-[9]. These are among the first low-temperature atmospheric plasmas aimed particularly at the exploitation of their ability to invoke the active and rich reactive chemistry close to ambient temperature. The main applications of these early devices are precision surface modification of low-temperature dielectric materials, for example thin film deposition and etching [7]-[9]. Variations of the early plasma jets include atmospheric plasma sheet jets [10] for the treatment of largely planar objects (e.g. polymeric sheets) as well as large arrays of many plasma jets for the treatment of complex-structured objects (e.g. surgical tools and open human wounds) [11]. As a material processing technology, the sub-100oC atmospheric-pressure plasma jet has benefited over the years from many innovations. Whilst a detailed account and analysis of these is clearly outside the scope of this Editorial, it is worth stating that there are different avenues with which to maintain a moderate electron density at the plasma core so as to keep the gas temperature at the sample point below a ceiling level. Most of the early studies employed excitation at radio frequencies above 10 MHz, at which electrons are largely confined in the plasma generation region, and this limits the current flow to and gas heating in the plume region of the plasma jet. Other techniques of current limitation have since been shown to be effective, including the use of dielectric barriers across a very large frequency range of 1 kHz--50 MHz, sub-microsecond pulses sustained at kHz frequencies, pulse-modulated radio frequencies and dual-frequency excitation [12]-[15]. These and other techniques have considerably advanced the atmospheric-pressure plasma jet technology. The period of some 15 years since the above

Microwave interaction with hot electron plasmas

International Nuclear Information System (INIS)

Tanaka, M.; Fujiwara, M.; Ikegami, H.

1980-01-01

A numerical calculation is presented of ray trajectories and cyclotron damping for toroidal plasmas using geometrical optics. In the absorption region, group velocity does not always coincide with the velocity of energy flow, therefore it should be careful to apply the geometrical optics to finite temperature plasmas. In these calculations, attention is paid mainly to the finite temperature effect on ray tracing. Some numerical results for ordinary waves are presented. Second, new cutoff and resonance appear in the plasmas with anisotropic electron temperature. This resonance frequency is shifted from the usual cyclotron resonance by an amount proportional to T 11 /mc 2 , so that one can determine T 11 when this resonance frequency is measured. A simple discussion is given. The results are presented of recent density measurement on Nagoya Bumpy Torus obtained by interferometer system with different frequencies, 35 GHz and 55 GHz. The results are different than each other in T-mode. The possible reasons for these differences are enumerated in this section

Current fusion plasma theory grant: Task I, Magnetic confinement fusion plasma theory: Final report, December 1, 1987--November 14, 1988

International Nuclear Information System (INIS)

Callen, J.D.

1988-07-01

The research performed under this grant over the current 11-1/2 month period has concentrated on key tokamak plasma confinement and heating theory issues: extensions of neoclassical MHD; viscosity coefficients and transport; nonlinear resistive MHD simulations of Tokapole II plasmas; ICRF and edge plasma interactions; energy confinement degradation due to macroscopic phenomena; and coordination of a new transport initiative. Progress and publications in these areas are briefly summarized in this report. 21 refs

Role of turbulence and electric fields in the establishment of improved confinement in tokamak plasmas

Czech Academy of Sciences Publication Activity Database

Van Oost, G.; Bulanin, V.V.; Donné, A.J.H.; Gusakov, E.Z.; Krämer-Flecken, A.; Krupnik, L.I.; Melnikov, A.; Peleman, P.; Razumova, K.; Stöckel, Jan; Vershkov, V.; Altukov, A.B.; Andreev, V.F.; Askinazi, L.G.; Bondarenko, I.S.; Dnestrovskij, A.Yu.; Eliseev, L.G.; Esipov, L.A.; Grashin, S.A.; Gurchenko, A.D.; Hogeweij, G.M.D.; Jachmin, S.; Khrebtov, S.M.; Kouprienko, D.V.; Lysenko, S.E.; Perfilov, S.V.; Petrov, A.V.; Popov, A.Yu.; Reiser, D.; Soldatov, S.; Stepanov, A.Yu.; Telesca, G.; Urazbaev, A.O.; Verdoolaege, G.; Zimmermann, O.

2006-01-01

Roč. 12, č. 6 (2006), s. 14-19 ISSN 1562-6016. [International Conference on Plasma Physics and Technology/11th./. Alushta, 11.9.2006-16.9.2006] Institutional research plan: CEZ:AV0Z20430508 Keywords : tokamak * plasma * improved confinement * turbulence Subject RIV: BL - Plasma and Gas Discharge Physics http:// vant .kipt.kharkov.ua/TABFRAME.html

Plasma physics for controlled fusion

International Nuclear Information System (INIS)

Miyamoto, K.

2010-01-01

The primary objective of this lecture note is to present the theories and experiments of plasma physics for recent activities of controlled fusion research for graduate and senior undergraduate students. Chapters 1-6 describe the basic knowledge of plasma and magnetohydrodynamics (MHD). MHD instabilities limit the beta ratio (ratio of plasma pressure to magnetic pressure) of confined plasma. Chapters 7-9 provide the kinetic theory of hot plasma and discuss the wave heating and non-inductive current drive. The dispersion relation derived by the kinetic theory are used to discuss plasma waves and perturbed modes. Landau damping is the essential mechanism of plasma heating and the stabilization of perturbation. Landau inverse damping brings the amplification of waves and the destabilization of perturbed modes. Chapter 10 explains the plasma transport due to turbulence, which is the most important and challenging subject for plasma confinement. Theories and simulations including subject of zonal flow are introduced. Chapters 11, 12 and 13 describe the recent activities of tokamak including ITER as well as spherical tokamak, reversed field pinch (RFP) and stellarator including quasi-symmetric configurations. Emphasis has been given to tokamak research since it made the most remarkable progress and the construction phase of 'International Tokamak Experimental Reactor' called ITER has already started. (author)

Predictive role of HER2/neu, topoisomerase-II-alpha, and tissue inhibitor of metalloproteinases (TIMP-1) for response to adjuvant taxane-based chemotherapy in patients with intermediate-risk breast cancer: results from the WSG-AGO EC-Doc trial.

Science.gov (United States)

Erber, Ramona; Gluz, Oleg; Brünner, Nils; Kreipe, Hans Heinrich; Pelz, Enrico; Kates, Ronald; Bartels, Annette; Huober, Jens; Mohrmann, Svjetlana; Moustafa, Zehra; Liedtke, Cornelia; Möbus, Volker; Augustin, Doris; Thomssen, Christoph; Jänicke, Fritz; Kiechle, Marion; Kuhn, Walther; Nitz, Ulrike; Harbeck, Nadia; Hartmann, Arndt

2015-04-01

Taxane-anthracycline-based adjuvant chemotherapy is standard of care in patients with node-positive breast cancer (BC) but is also associated with severe side effects and significant costs. It is yet unclear, which biomarkers would predict benefit from taxanes and/or general chemoresistance. In this study, we investigate a large cohort of patients with intermediate-risk BC treated within the WSG EC-DOC Trial for the predictive impact of topoisomerase-II-alpha, HER2/neu, and TIMP-1. Tumor tissue was available in a representative cohort of 772 cases of the WSG EC-DOC Trial collective which compared 4xEC-4xDoc versus 6xCEF/CMF. In addition to hormone receptor status and Ki-67, HER2/neu+ and topoisomerase-II-alpha status using fluorescence in situ hybridisation (FISH) and immunohistochemistry, TIMP-1 using immunohistochemistry, and aneuploidy of chromosome 17 using FISH were evaluated and correlated with outcome and taxane benefit. There was significant superiority of EC-Doc over CEF regarding 5-year DFS (90 vs. 80 %, respectively, p = 0.006) particularly in patient subgroups defined by HR+, HER2/neu+, high proliferation (i.e., Ki-67 ≥ 20 %), patient age >50 years old and normal chromosome 17 status, high TIMP-1 and low topoisomerase-II-alpha protein expression. Significant prognostic factors in multivariate analysis were EC-Doc therapy (HR = 0.61; 95 %CI 0.38-0.986), age Doc vs. CEF) and high topoisomerase-II-alpha protein expression (HR = 0.427; 95 %CI 0.203-0.900) in multivariate interaction analysis. Despite of univariate predictive effect of HER2/neu status among other factors only topoisomerase-II-alpha protein expression was associated with significant benefit from EC-Doc compared to CEF by multivariate interaction analysis.

Simplified PET measurement for evaluating histamine H1 receptors in human brains using [11C]doxepin

International Nuclear Information System (INIS)

Mochizuki, Hideki; Kimura, Yuichi; Ishii, Kenji; Oda, Keiichi; Sasaki, Toru; Tashiro, Manabu; Yanai, Kazuhiko; Ishiwata, Kiichi

2004-01-01

The aim of this study was to develop simplified positron emission tomography measurement using [ 11 C]doxepin ([ 11 C]DOX) to evaluate histamine H 1 receptors (H1Rs) in human brains. We evaluated the correlation between the distribution volume (DV) of [ 11 C]DOX, estimated quantitatively with a two-compartment model, and the [ 11 C]DOX uptake obtained at various time intervals and normalized using the metabolite-corrected plasma radioactivity. We found that the static 70- to 90-min images normalized using the plasma radioactivity at 10 min postinjection reflected the DV of [ 11 C]DOX-H1R binding

Plasma concentrations of midazolam during continuous subcutaneous administration in palliative care.

Science.gov (United States)

Bleasel, M D; Peterson, G M; Dunne, P F

1994-01-01

We have investigated the steady-state plasma concentrations of midazolam during continuous subcutaneous administration in palliative care. Using a sensitive gas chromatography with electron capture detector assay, plasma concentrations of midazolam were measured in 11 patients (median age 68 years; range 47-82 years; six females) receiving the drug by continuous subcutaneous infusion (median rate 20 mg/day; range 10-60 mg/day). While not significant, the infusion rate tended to decrease with increasing age of the patient (Spearman's p = -0.51; p = 0.11). The steady-state plasma concentration range was 10-147 ng/ml, with a median of 30 ng/ml. Infusion rates and plasma concentrations of midazolam were correlated (Spearman's p = 0.71; p < 0.05). No other significant relationships were found between plasma concentrations and the variables of age, sex and liver function.

DocênciaS na/com a contemporaneidade: experiências (transformadoras em meio à cultura digital e em rede

Directory of Open Access Journals (Sweden)

Adriana Rocha Bruno

2015-12-01

Full Text Available http://dx.doi.org/10.5007/2175-795X.2015v33n2p589 O presente artigo aborda as docênciaS na contemporaneidade, em meio à cultura digital e em rede. A multiplicidade, uma das marcas do mundo atual, convoca todos à distorção de olhares, maximização de percepções, escutas e odores, eclosão de paladares, para a vivência paradoxal, em dimensões atemporais e pluriespaciais. O diverso e o plural coexistem e, assim, são contraditórios, complexos e também instigantes. Para falar/pensar em processos formativos, docência e discência, neste contexto faz-se necessário plurificar. Dessa forma, justifica-se a expressão docênciaS, com destaque para a letra S, plural, múltipla. Para tratar de um tema tão vasto e complexo, são apresentados três pontos de “flexão”: 1 Oroboro: a persistência/insistência da docência apartada da discência; 2 a cultura digital e em rede: desdobrando ideias para a prática do desapego; 3 temas e dilemas atuantes como campo de possibilidades nas/com as docênciaS contemporâneas. Todos estes pontos são desenvolvidos/debatidos por meio das pesquisas que foram realizadas nos últimos anos, em articulação com as experiências de docências, agenciadas pelas investigações sobre as práticas pedagógicas cocriadas na cibercultura.   Teaching in/with the contemporaneity: (transforming experiences through the digital and networked culture  Abstract This article discusses the teaching(S (in the plural in contemporary times, in the midst of digital culture and networked. The multiplicity, one of the hallmarks of today's world, calls all of us to the distortion of looks, maximizing perceptions, listens and smells, in an explosion of flavors, to the paradoxical experience in timeless and multi spatial dimensions. The diverse and plural coexist in a contradictory, complex and intriguing way. To talk/think about training processes, teaching and learning, in this context, it is necessary to capture and

Pulsed time-of-flight refractometry measurements of the electron density in the T-11M tokamak

International Nuclear Information System (INIS)

Petrov, A.A.; Petrov, V.G.; Malyshev, A.Yu.; Markov, V.K.; Babarykin, A.V.

2002-01-01

A new method for measuring the plasma density in magnetic confinement systems - pulsed time-of-flight refractometry - is developed and tested experimentally in the T-11M tokamak. The method is based on the measurements of the time delay of short (with a duration of several nanoseconds) microwave pulses propagating through the plasma. When the probing frequency is much higher than the plasma frequency, the measured delay in the propagation time is proportional to the line-averaged electron density regardless of the density profile. A key problem in such measurements is the short time delay of the pulse in the plasma (∼1 ns or less for small devices) and, consequently, low accuracy of the measurements of the average density. Various methods for improving the accuracy of such measurements are proposed and implemented in the T-11M experiments. The measurements of the line-averaged density in the T-11M tokamak in the low-density plasma regime are performed. The results obtained agree satisfactorily with interferometric data. The measurement errors are analyzed, and the possibility of using this technique to measure the electron density profile and the position of the plasma column is discussed

Edge Plasma Physics and Relevant Diagnostics on the CASTOR tokamak

Czech Academy of Sciences Publication Activity Database

Stöckel, Jan; Devynck, P.; Gunn, J.; Martines, E.; Bonhomme, G.; Van Oost, G.; Hron, Martin; Ďuran, Ivan; Pánek, Radomír; Stejskal, Pavel; Adámek, Jiří

2004-01-01

Roč. 3, - (2004), s. 1-6 ISSN 1433-5581. [First Cairo Conference on Plasma Physics & Applications. Cairo, 11.10.2003-15.10.2003] R&D Projects: GA ČR GA202/03/0786; GA ČR GP202/03/P062 Keywords : tokamak * edge plasma * probe diagnostics * biasing * turbulence * polarization Subject RIV: BL - Plasma and Gas Discharge Physics

Proteomics unveil corticoid-induced S100A11 shuttling in keratinocyte differentiation

International Nuclear Information System (INIS)

Dezitter, Xavier; Hammoudi, Fatma; Belverge, Nicolas; Deloulme, Jean-Christophe; Drobecq, Herve; Masselot, Bernadette; Formstecher, Pierre; Mendy, Denise; Idziorek, Thierry

2007-01-01

Unlike classical protein extraction techniques, proteomic mapping using a selective subcellular extraction kit revealed S100A11 as a new member of the S100 protein family modulated by glucocorticoids in keratinocytes. Glucocorticoids (GC)-induced S100A11 redistribution in the 'organelles and membranes' compartment. Microscopic examination indicated that glucocorticoids specifically routed cytoplasmic S100A11 toward perinuclear compartment. Calcium, a key component of skin terminal differentiation, directed S100A11 to the plasma membrane as previously reported. When calcium was added to glucocorticoids, minor change was observed at the proteomic level while confocal microscopy revealed a rapid and dramatic translocation of S100A11 toward plasma membrane. This effect was accompanied by strong nuclear condensation, loss of mitochondrial potential and DNA content, and increased high molecular weight S100A11 immunoreactivity, suggesting corticoids accelerate calcium-induced terminal differentiation. Finally, our results suggest GC-induced S100A11 relocalization could be a key step in both keratinocyte homeostasis and glucocorticoids side effects in human epidermis

Human ovolution and plasma oxytocin

International Nuclear Information System (INIS)

Kumaresan, Perianna; Kumaresan, Malathi; Hossini, Mahmood; Arellano, Carolina; Vasicka, Alois

1983-01-01

Plasma oxytocin (OT) concentrations were measured by radioimmunoassay (RIA) method without extracting plasma in 11 normal menstruating women. Mean plasma OT level began to increase steadily from the 7th day of the menstrual cycle and this level rose up to 20+-5 μU/ml (Mean+-S.E.) on the 10th day of the cycle. OT level declined to 13+-6 μU/ml on the day of the LH peak and continuously declined for another 2 days - then rose. The OT level was higher during the follicular phase than during the luteal phase. In 1 individual OT measured in 2 cycles a year apart showed the highest level of OT coincided with LH and FSH peak and abruptly declined. When there was the highest level of progesterone, the OT level was measurable 1 out of 11 cycles. From this study, we conclude that OT may have a role in human ovulation either synergistically or alone with other ovulatory mechanisms and ovarian estradiol and progesterone control the secretion of OT and also suggests that OT may play some role in the regulation of the luteolysis and the menstrual cycle in women. (author)

On plasma ion beam formation in the Advanced Plasma Source

International Nuclear Information System (INIS)

Harhausen, J; Foest, R; Hannemann, M; Ohl, A; Brinkmann, R P; Schröder, B

2012-01-01

The Advanced Plasma Source (APS) is employed for plasma ion-assisted deposition (PIAD) of optical coatings. The APS is a hot cathode dc glow discharge which emits a plasma ion beam to the deposition chamber at high vacuum (p ≲ 2 × 10 −4 mbar). It is established as an industrial tool but to date no detailed information is available on plasma parameters in the process chamber. As a consequence, the details of the generation of the plasma ion beam and the reasons for variations of the properties of the deposited films are barely understood. In this paper the results obtained from Langmuir probe and retarding field energy analyzer diagnostics operated in the plasma plume of the APS are presented, where the source was operated with argon. With increasing distance to the source exit the electron density (n e ) is found to drop by two orders of magnitude and the effective electron temperature (T e,eff ) drops by a factor of five. The parameters close to the source region read n e ≳ 10 11 cm −3 and T e,eff ≳ 10 eV. The electron distribution function exhibits a concave shape and can be described in the framework of the non-local approximation. It is revealed that an energetic ion population leaves the source region and a cold ion population in the plume is build up by charge exchange collisions with the background neutral gas. Based on the experimental data a scaling law for ion beam power is deduced, which links the control parameters of the source to the plasma parameters in the process chamber. (paper)

Li collection experiments on T-11M and T-10 in framework of Li closed loop concept

International Nuclear Information System (INIS)

Mirnov, Sergey V.; Alekseev, Andrey G.; Belov, Alexandr M.; Djigailo, Nadejda T.; Kostina, Anastasiya N.; Lazarev, Vladimir B.; Lyublinski, Igor E.; Nesterenko, Vladislav M.; Vertkov, Aleksei V.; Vershkov, Vladimir A.

2012-01-01

Highlights: ► We investigated the Li collection by different type of limiters intersecting the scrape-of-layer (SOL) of T-10 and T-11M tokamaks. ► The analysis of the sample-witnesses located on T-11M limiters showed, that 60 ± 20% of the lithium injected during plasma operating of T-11M had been collected by limiters. ► We believe that is the real opportunity of the tokamak plasma facing components (PFC) development on the basis of liquid lithium circulation. - Abstract: The concept of a steady state tokamak with plasma facing components (PFC) on the basis of liquid lithium circulation demands the decision of three tasks: lithium injection to the plasma, lithium ions collection before their deposition on the vacuum vessel and lithium returning to the injection zone. Main subject of paper is the investigations of Li collection by different types of limiters intersected the scrape-of-layer (SOL) in T-10 and T-11M tokamaks. For finding solution for this problem in T-11M and T-10, experiments have been applied with Li-, C-rail limiters and ring SS R-limiter-collector (T-11M). The efficiency of Li collection by limiters in T-11M and T-10 tokamaks was investigated by post mortem sample–witness analysis and (T-11M) by the use of the mobile graphite probe (limiter) as a recombination target in the stream of lithium ions. The characteristic depth of lithium penetration in the SOL area of T-11M is about 2 cm and 4 cm in SOL of T-10. The quantitative analysis of the sample–witnesses located on T-11M limiters showed that 60 ± 20% of the lithium injected during plasma operating of T-11M had been collected by limiters. It confirms an opportunity of the lithium ions collection by limiters in tokamak SOL.

A variant in the G6PC2/ABCB11 locus is associated with increased fasting plasma glucose, increased basal hepatic glucose production and increased insulin release after oral and intravenous glucose loads

DEFF Research Database (Denmark)

Rose, C S; Grarup, N; Krarup, N T

2009-01-01

An association between elevated fasting plasma glucose and the common rs560887 G allele in the G6PC2/ABCB11 locus has been reported. In Danes we aimed to examine rs560887 in relation to plasma glucose and serum insulin responses following oral and i.v. glucose loads and in relation to hepatic...... glucose production during a hyperinsulinaemic-euglycaemic clamp. Furthermore, we examined rs560887 for association with impaired fasting glycaemia (IFG), impaired glucose tolerance (IGT), type 2 diabetes and components of the metabolic syndrome....

Radioligand binding analysis of α 2 adrenoceptors with [11C]yohimbine in brain in vivo: Extended Inhibition Plot correction for plasma protein binding

DEFF Research Database (Denmark)

Phan, Jenny-Ann; Landau, Anne M.; Jakobsen, Steen

2017-01-01

We describe a novel method of kinetic analysis of radioligand binding to neuroreceptors in brain in vivo, here applied to noradrenaline receptors in rat brain. The method uses positron emission tomography (PET) of [11C]yohimbine binding in brain to quantify the density and affinity of α 2...... Inhibition Plot introduced here yielded an estimate of the volume of distribution of non-displaceable ligand in brain tissue that increased with the increase of the free fraction of the radioligand in plasma. The resulting binding potentials of the radioligand declined by 50-60% in the presence of unlabeled...

CT features of abdominal plasma cell neoplasms

International Nuclear Information System (INIS)

Monill, J.; Pernas, J.; Montserrat, E.; Perez, C.; Clavero, J.; Martinez-Noguera, A.; Guerrero, R.; Torrubia, S.

2005-01-01

The aim of this study was to describe the CT features of abdominal plasma cell neoplasms. We reviewed CT imaging findings in 11 patients (seven men, four women; mean age 62 years) with plasma cell neoplasms and abdominal involvement. Helical CT of the entire abdomen and pelvis was performed following intravenous administration of contrast material. Images were analyzed in consensus by two radiologists. Diagnoses were made from biopsy, surgery and/or clinical follow-up findings. Multiple myeloma was found in seven patients and extramedullary plasmacytoma in four patients. All patients with multiple myeloma had multifocal disease with involvement of perirenal space (4/7), retroperitoneal and pelvic lymph nodes (3/7), peritoneum (3/7), liver (2/7), subcutaneous tissues (2/7) and kidney (1/7). In three of the four patients with extramedullary plasmacytoma, a single site was involved, namely stomach, vagina and retroperitoneum. In the fourth patient, a double site of abdominal involvement was observed with rectal and jejunal masses. Plasma cell neoplasm should be considered in the differential diagnosis of single or multiple enhancing masses in the abdomen or pelvis. Abdominal plasma cell neoplasms were most frequently seen as well-defined enhancing masses (10/11). (orig.)

RF plasma source for heavy ion beam charge neutralization

International Nuclear Information System (INIS)

Efthimion, Philip C.; Gilson, Erik; Grisham, Larry; Davidson, Ronald C.; Yu, Simon S.; Logan, B. Grant

2003-01-01

Highly ionized plasmas are being used as a medium for charge neutralizing heavy ion beams in order to focus the ion beam to a small spot size. A radio frequency (RF) plasma source has been built at the Princeton Plasma Physics Laboratory (PPPL) in support of the joint Neutralized Transport Experiment (NTX) at the Lawrence Berkeley National Laboratory (LBNL) to study ion beam neutralization with plasma. The goal is to operate the source at pressures ∼ 10 -5 Torr at full ionization. The initial operation of the source has been at pressures of 10 -4 -10 -1 Torr and electron densities in the range of 10 8 -10 11 cm -3 . Recently, pulsed operation of the source has enabled operation at pressures in the 10 -6 Torr range with densities of 10 11 cm -3 . Near 100% ionization has been achieved. The source has been integrated with the NTX facility and experiments have begun