WorldWideScience

Sample records for plant breeding

  1. Plant breeding and genetics

    Science.gov (United States)

    The ultimate goal of plant breeding is to develop improved crops. Improvements can be made in crop productivity, crop processing and marketing, and/or consumer quality. The process of developing an improved cultivar begins with intercrossing lines with high performance for the traits of interest, th...

  2. Mutations induced in plant breeding

    Energy Technology Data Exchange (ETDEWEB)

    Barriga B, P. (Universidad Austral de Chile, Valdivia. Inst. de Produccion y Sanidad Vegetal)

    1984-10-01

    The most significant aspects of the use of ionizing radiations in plant breeding are reviewed. Aspects such as basic principles of mutation, expression and selection in obtention of mutants, methods for using induced mutations and sucess achieved with this methodology in plant breeding are reviewed. Results obtained in a program of induced mutation on wheat for high content of protein and lysine at the Universidad Austral de Chile are presented.

  3. Evolution, plant breeding and biodiversity

    Directory of Open Access Journals (Sweden)

    Salvatore Ceccarelli

    2011-11-01

    Full Text Available This paper deals with changes in biodiversity during the course of evolution, plant domestication and plant breeding. It shows than man has had a strong influence on the progressive decrease of biodiversity, unconscious at first and deliberate in modern times. The decrease in biodiversity in the agricultures of the North causes a severe threat to food security and is in contrasts with the conservation of biodiversity which is part of the culture of several populations in the South. The concluding section of the paper shows that man could have guided evolution in a different way and shows an example of participatory plant breeding, a type of breeding which is done in collaboration with farmers and is based on selection for specific adaptation. Even though participatory plant breeding has been practiced for only about 20 years and by relatively few groups, the effects on both biodiversity and crop production are impressive. Eventually the paper shows how participatory plant breeding can be developed into ‘evolutionary plant breeding’ to cope in a dynamic way with climate changes.

  4. Next Generation Plant Breeding

    NARCIS (Netherlands)

    Goud, J.C.

    2012-01-01

    Van 11-14 november 2012 vond in de Reehorst de conferentie ‘Next Generation Plant Breeding’ plaats. Tijdens deze bijeenkomst kwamen de grote uitdagingen van de toekomstige plantenveredeling aan de orde: de opkomst van nieuwe sequencing-technieken, de bijbehorende enorme hoeveelheid gegevens die gepr

  5. Next Generation Plant Breeding

    NARCIS (Netherlands)

    Goud, J.C.

    2012-01-01

    Van 11-14 november 2012 vond in de Reehorst de conferentie ‘Next Generation Plant Breeding’ plaats. Tijdens deze bijeenkomst kwamen de grote uitdagingen van de toekomstige plantenveredeling aan de orde: de opkomst van nieuwe sequencing-technieken, de bijbehorende enorme hoeveelheid gegevens die

  6. Next Generation Plant Breeding

    NARCIS (Netherlands)

    Goud, J.C.

    2012-01-01

    Van 11-14 november 2012 vond in de Reehorst de conferentie ‘Next Generation Plant Breeding’ plaats. Tijdens deze bijeenkomst kwamen de grote uitdagingen van de toekomstige plantenveredeling aan de orde: de opkomst van nieuwe sequencing-technieken, de bijbehorende enorme hoeveelheid gegevens die gepr

  7. Plant Breeding: Surprisingly, Less Sex Is Better.

    Science.gov (United States)

    van Dijk, Peter J; Rigola, Diana; Schauer, Stephen E

    2016-02-01

    Introduction of apomixis, asexual reproduction through seeds, into crop species has the potential to dramatically transform plant breeding. A new study demonstrates that traits can be stably transferred between generations in newly produced apomictic lines, and heralds a breeding revolution needed to increase food production for the growing planet.

  8. Organic plant breeding and propagation : concepts and strategies

    NARCIS (Netherlands)

    Lammerts van Bueren, E.T.

    2002-01-01

    Key-words : crop ideotype, genetic diversity, integrity of plants, intrinsic value, isophenic line mixture varieties, organic plant breeding, organic farming, organic propagation, participatory plant breeding, variety characteristics, seed-b

  9. Plant Breeding by Using Radiation Mutation

    Energy Technology Data Exchange (ETDEWEB)

    Kang, Si Yong; Kim, Dong Sub; Lee, Geung Joo (and others)

    2007-06-15

    A mutation breeding is to use physical or chemical mutagens to induce mutagenesis, followed by individual selections with favorable traits. The mutation breeding has many advantages over other breeding methods, which include the usefulness for improving one or two inferior characteristics, applications to broad species with different reproductive systems or to diverse plant materials, native or plant introduction with narrow genetic background, time and cost-effectiveness, and valuable mutant resources for genomic researches. Recent applications of the radiation breeding techniques to developments of flowering plants or food crops with improved functional constituents heightened the public's interests in agriculture and in our genetic resources and seed industries. The goals of this project, therefore, include achieving advances in domestic seed industries and agricultural productivities by developing and using new radiation mutants with favored traits, protecting an intellectual property right of domestic seeds or germplasm, and sharing the valuable mutants and mutated gene information for the genomic and biotech researches that eventually leads to economic benefits.

  10. Radiation-induced mutations and plant breeding

    Energy Technology Data Exchange (ETDEWEB)

    Naqvi, S.H.M.

    1985-01-01

    Ionizing radiation could cause genetic changes in an organism and could modify gene linkages. The induction of mutation through radiation is random and the probability of getting the desired genetic change is low but can be increased by manipulating different parameters such as dose rate, physical conditions under which the material has been irradiated, etc. Induced mutations have been used as a supplement to conventional plant breeding, particularly for creating genetic variability for specific characters such as improved plant structure, pest and disease resistance, and desired changes in maturity period; more than 200 varieties of crop plants have been developed by this technique. The Pakistan Atomic Energy Commission has used this technique fruitfully to evolve better germplasm in cotton, rice, chickpea, wheat and mungbean; some of the mutants have become popular commercial varieties. This paper describes some uses of radiation induced mutations and the results achieved in Pakistan so far.

  11. Binucleation to breed new plant species adaptable to their environments

    OpenAIRE

    Moustafa, Khaled

    2015-01-01

    Classical plant breeding approaches may fall short to breed new plant species of high environmental and ecological interests. Biotechnological and genetic manipulations, on the other hand, may hold more effective capabilities to circumvent the limitations of sexual incompatibility and conventional breeding programs. Given that plant cells encompass multiple copies of organellar genomes (mitochondrial and plastidial genomes), an important question could be raised about whether an artificial at...

  12. Analysis of Plant Breeding on Hadoop and Spark

    Directory of Open Access Journals (Sweden)

    Shuangxi Chen

    2016-01-01

    Full Text Available Analysis of crop breeding technology is one of the important means of computer-assisted breeding techniques which have huge data, high dimensions, and a lot of unstructured data. We propose a crop breeding data analysis platform on Spark. The platform consists of Hadoop distributed file system (HDFS and cluster based on memory iterative components. With this cluster, we achieve crop breeding large data analysis tasks in parallel through API provided by Spark. By experiments and tests of Indica and Japonica rice traits, plant breeding analysis platform can significantly improve the breeding of big data analysis speed, reducing the workload of concurrent programming.

  13. New trends in plant breeding - example of soybean

    Directory of Open Access Journals (Sweden)

    Miladinović Jegor

    2015-01-01

    Full Text Available Soybean breeding and selection is a continual process designed to increase yield levels and improve resistance to biotic and abiotic stresses. Soybean breeders have been successful in producing a large number of varieties using conventional breeding methods, the Single Seed Descent method in particular. In recent decades, with the increased use of genetic transformations, backcrossing is more frequent though the only trait that has been commercialized is glyphosate tolerance. Physiological breeding poses a particular challenge, as well as phenotyping and development of useful criteria and techniques suitable for plant breeding. Using modern remote sensing techniques provides great opportunity for collecting a large amount of physiological data in real environment, which is necessary for physiological breeding. Molecular based plant breeding methods and techniques are a conceptual part of any serious breeding program. Among those methods, the most extensively used is marker-assisted selection, as a supplement to conventional breeding methods. [Projekat Ministarstva nauke Republike Srbije, br. TR-31022

  14. Breeding business : the future of plant breeding in the light of developments in patent rights and plant breeder's rights

    NARCIS (Netherlands)

    Louwaars, N.P.; Dons, J.J.M.; Overwalle, van G.; Raven, H.; Arundel, A.; Eaton, D.; Nelis, A.

    2009-01-01

    Plant breeding serves an important public interest. Two intellectual property (IP) systems are relevant for the protection of innovations in this sector: plant breeder's rights and patent rights. Some exemptions play an important role in plant breeding, such as the 'breeder's exemption', which is

  15. Breeding business : the future of plant breeding in the light of developments in patent rights and plant breeder's rights

    NARCIS (Netherlands)

    Louwaars, N.P.; Dons, J.J.M.; Overwalle, van G.; Raven, H.; Arundel, A.; Eaton, D.; Nelis, A.

    2009-01-01

    Plant breeding serves an important public interest. Two intellectual property (IP) systems are relevant for the protection of innovations in this sector: plant breeder's rights and patent rights. Some exemptions play an important role in plant breeding, such as the 'breeder's exemption', which is un

  16. Understanding crop genetic diversity under modern plant breeding.

    Science.gov (United States)

    Fu, Yong-Bi

    2015-11-01

    Maximizing crop yield while at the same time minimizing crop failure for sustainable agriculture requires a better understanding of the impacts of plant breeding on crop genetic diversity. This review identifies knowledge gaps and shows the need for more research into genetic diversity changes under plant breeding. Modern plant breeding has made a profound impact on food production and will continue to play a vital role in world food security. For sustainable agriculture, a compromise should be sought between maximizing crop yield under changing climate and minimizing crop failure under unfavorable conditions. Such a compromise requires better understanding of the impacts of plant breeding on crop genetic diversity. Efforts have been made over the last three decades to assess crop genetic diversity using molecular marker technologies. However, these assessments have revealed some temporal diversity patterns that are largely inconsistent with our perception that modern plant breeding reduces crop genetic diversity. An attempt was made in this review to explain such discrepancies by examining empirical assessments of crop genetic diversity and theoretical investigations of genetic diversity changes over time under artificial selection. It was found that many crop genetic diversity assessments were not designed to assess diversity impacts from specific plant breeding programs, while others were experimentally inadequate and contained technical biases from the sampling of cultivars and genomes. Little attention has been paid to theoretical investigations on crop genetic diversity changes from plant breeding. A computer simulation of five simplified breeding schemes showed the substantial effects of plant breeding on the retention of heterozygosity over generations. It is clear that more efforts are needed to investigate crop genetic diversity in space and time under plant breeding to achieve sustainable crop production.

  17. Simulation Modeling in Plant Breeding: Principles and Applications

    Institute of Scientific and Technical Information of China (English)

    WANG Jian-kang; Wolfgang H Pfeiffer

    2007-01-01

    Conventional plant breeding largely depends on phenotypic selection and breeder's experience, therefore the breeding efficiency is low and the predictions are inaccurate. Along with the fast development in molecular biology and biotechnology, a large amount of biological data is available for genetic studies of important breeding traits in plants,which in turn allows the conduction of genotypic selection in the breeding process. However, gene information has not been effectively used in crop improvement because of the lack of appropriate tools. The simulation approach can utilize the vast and diverse genetic information, predict the cross performance, and compare different selection methods. Thus,the best performing crosses and effective breeding strategies can be identified. QuLine is a computer tool capable of defining a range, from simple to complex genetic models, and simulating breeding processes for developing final advanced lines. On the basis of the results from simulation experiments, breeders can optimize their breeding methodology and greatly improve the breeding efficiency. In this article, the underlying principles of simulation modeling in crop enhancement is initially introduced, following which several applications of QuLine are summarized, by comparing the different selection strategies, the precision parental selection, using known gene information, and the design approach in breeding. Breeding simulation allows the definition of complicated genetic models consisting of multiple alleles, pleiotropy, epistasis, and genes, by environment interaction, and provides a useful tool for breeders, to efficiently use the wide spectrum of genetic data and information available.

  18. Future perspectives of in vitro culture and plant breeding

    DEFF Research Database (Denmark)

    Kuligowska, Katarzyna; Lütken, Henrik Vlk; Hegelund, Josefine Nymark

    2015-01-01

    Conventional breeding and plant improvement increasingly become inadequate to keep up with progression and high quality demands. Thus biotechnological techniques are more and more adopted. Initially, biotechnological tools have supported conventional breeding by in vitro culture techniques......, comprising micropropagation, speeding up multiplication and improving uniformity. Also, crossing barriers of incompatible plants have been overcome using in vitro methods and embryo rescue techniques in wide hybridization approaches. Marker-assisted breeding is employed for targeted selection of DNA...... fragments from parental plants in respect to identification of desired characteristics in offspring or among hybrid plants. Phylogeny-assisted breeding and knowledge about genetic relationships support the ability to develop new hybrids. Finally, chemical and radiation induced mutagenesis are established...

  19. Call for Papers--Molecular Plant Breeding (ISSN 1923-8266)

    Institute of Scientific and Technical Information of China (English)

    2011-01-01

    Molecular Plant Breeding (ISSN 1923-8266, online, http://mpb.sophiapublisher.com/) is an open access and peer reviewed journal, which publishes original research papers involving the transgenic breeding and marker assisted breeding in plants.

  20. Binucleation to breed new plant species adaptable to their environments.

    Science.gov (United States)

    Moustafa, Khaled

    2015-01-01

    Classical plant breeding approaches may fall short to breed new plant species of high environmental and ecological interests. Biotechnological and genetic manipulations, on the other hand, may hold more effective capabilities to circumvent the limitations of sexual incompatibility and conventional breeding programs. Given that plant cells encompass multiple copies of organellar genomes (mitochondrial and plastidial genomes), an important question could be raised about whether an artificial attempt to duplicate the nuclear genome might also be conceivable through a binucleation approach (generating plant cells with 2 nuclei from 2 different plant species) for potential production of new polyploidies that would characterize new plant species. Since the complexities of plant genomes are the result of multiple genome duplications, an artificial binucleation approach would thus be of some interest to eventually varying plant genomes and producing new polyploidy from related or distal plant species. Here, I discuss the potentiality of such an approach to engineer binucleated plant cells as a germ of new plant species to fulfill some environmental applications such as increasing the biodiversity and breeding new species adaptable to harsh environmental stresses and increasing green surfaces to reduce atmospheric pollutions in arid lands with poor vegetation.

  1. Does genomic selection have a future in plant breeding?

    Science.gov (United States)

    Jonas, Elisabeth; de Koning, Dirk-Jan

    2013-09-01

    Plant breeding largely depends on phenotypic selection in plots and only for some, often disease-resistance-related traits, uses genetic markers. The more recently developed concept of genomic selection, using a black box approach with no need of prior knowledge about the effect or function of individual markers, has also been proposed as a great opportunity for plant breeding. Several empirical and theoretical studies have focused on the possibility to implement this as a novel molecular method across various species. Although we do not question the potential of genomic selection in general, in this Opinion, we emphasize that genomic selection approaches from dairy cattle breeding cannot be easily applied to complex plant breeding.

  2. Rapid cyling plant breeding in citrus

    Science.gov (United States)

    Resistance or tolerance to huanglongbing (HLB) and other important traits have been identified in several citrus types and relatives and associated markers should be identified soon. What is urgently needed in addition is an accelerated strategy for citrus variety breeding. Identification and use of...

  3. MATING DESIGNS: HELPFUL TOOL FOR QUANTITATIVE PLANT BREEDING ANALYSIS

    Directory of Open Access Journals (Sweden)

    Athanase Nduwumuremyi

    2013-12-01

    Full Text Available Selection of parental materials and good mating designs in conventional plant breeding are the keys to the successful plant breeding programme. However, there are several factors affecting the choices of mating designs. Mating design refers to the procedure of producing the progenies, in plant breeding, plant breeders and geneticists, theoretically and practically, they use different form of mating designs and arrangements for targeted purpose. The choice of a mating design for estimating genetic variances should be dictated by the objectives of the study, time, space, cost and other biological limitations. In all mating designs, the individuals are taken randomly and crossed to produce progenies which are related to each other as half-sibs or full-sibs. A form of multivariate analysis or the analysis of variance can be adopted to estimate the components of variances. Therefore, this review aimed at highlighting the most used mating design in plant breeding and genetics studies. It provides easy and quick insight of the different form of mating designs and some statistical components for successful plant breeding.

  4. Induction of Parthenogenesis in Plants and Application in Breeding

    Institute of Scientific and Technical Information of China (English)

    MOU Chun-hong; LI Wen-li; WU Xian-jun; WANG Bin; XIE Zhao-hui; HU Yan-yu; WANG Xu-dong

    2003-01-01

    Parthenogenesis is a kind of reproductive mode by which the egg develops into embryo without fertilization and grows into plant finally. This article summarizes the advances of inducing parthenogenesis in plants in relation to induction methods, affecting factors and the studies in embryology. In addition, the application of parthenogenesis in breeding is also discussed.

  5. Application of bioinformatics in plant breeding

    NARCIS (Netherlands)

    Vassilev, D.; Leunissen, J.; Atanassov, A.; Nenov, A.; Dimov, G.

    2005-01-01

    The goal of plant genomics is to understand the genetic and molecular basis of all biological processes in plants that are relevant to the specie. This understanding is fundamental to allow efficient exploitation of plants as biological resources in the development of new cultivars with improved qua

  6. Microbiome selection could spur next-generation plant breeding strategies

    Directory of Open Access Journals (Sweden)

    Murali Gopal

    2016-12-01

    Full Text Available Plants, though sessile, have developed a unique strategy to counter biotic and abiotic stresses by symbiotically co-evolving with microorganisms and tapping into their genome for this purpose. Soil is the bank of microbial diversity from which a plant selectively sources its microbiome to suit its needs. Besides soil, seeds, which carry the genetic blueprint of plants during trans-generational propagation, are home to diverse microbiota that acts as the principal source of microbial inoculum in crop cultivation. Overall, a plant is ensconced both on the outside and inside with a diverse assemblage of microbiota. Together, the plant genome and the genes of the microbiota that the plant harbours in different plant tissues i.e the ‘plant microbiome’, form the holobiome which is now considered as unit of selection: ‘the holobiont’. The ‘plant microbiome’ not only helps plants to remain fit but also offers critical genetic variability, hitherto, not employed in the breeding strategy by plant breeders, who traditionally have exploited the genetic variability of the host for developing high yielding or disease tolerant or drought resistant varieties. This fresh knowledge of the microbiome, particularly of the rhizosphere, offering genetic variability to plants, opens up new horizons for breeding that could usher in cultivation of next-generation crops depending less on inorganic inputs, resistant to insect pest and diseases and resilient to climatic perturbations. We surmise, from ever increasing evidences, that plants and their microbial symbionts need to be co-propagated as life-long partners in future strategies for plant breeding.

  7. Using semantic web technology to accelerate plant breeding

    NARCIS (Netherlands)

    Chibon, P.Y.; Carreres, B.M.; Weerd, de H.H.; Visser, R.G.F.; Finkers, H.J.

    2012-01-01

    One goal within plant breeding is to find the causal gene(s) explaining a given phenotype. Semantic web technology brings opportu- nities to integration data and information accross spread data sources. Chebi2gene and Marker2sequence are two applications relying on this se- mantic web technology to

  8. Ethics of Plant Breeding: The IFOAM Basic Principles as a Guide for the Evolution of Organic Plant Breeding

    NARCIS (Netherlands)

    Lammerts Van Bueren, E.

    2010-01-01

    The basic values of organic agriculture is laid down in the IFOAM four basic principles: the principle of health, the principle of ecology, the principle of fairness and the principle of care. These principles and the consequences and challenges for the further development of organic plant breeding

  9. Ethical distinctions between different kinds of plant breeding

    DEFF Research Database (Denmark)

    Myskja, B.K.; Schouten, H.J.; Gjerris, Mickey

    2015-01-01

    ethically between these approaches, often relying on ambiguous concepts such as ‘naturalness’. We argue that a virtue-based approach can be used to explicate the assumptions behind such distinctions that are relevant for scientific and public discourse, and support a conclusion that there are ethical......The article discusses whether there are ethically significant distinctions between different forms of plant breeding. We distinguish different forms of plant breeding according to the kind of technology and degree of human intervention compared to plant reproduction occurring in nature. According...... to the dominant scientific view, the main concerns are issues of biosafety that are dealt with through risk assessment. Thus, the techniques are ethically equivalent and only the resulting product is of interest. In parts of the societal and philosophical discourse, however, there are attempts to distinguish...

  10. Plant breeding with marker-assisted selection in Brazil

    Directory of Open Access Journals (Sweden)

    Ney Sussumu Sakiyama

    2014-03-01

    Full Text Available Over the past three decades, molecular marker studies reached extraordinary advances, especially for sequencing and bioinformatics techniques. Marker-assisted selection became part of the breeding program routines of important seed companies, in order to accelerate and optimize the cultivar developing processes. Private seed companies increasingly use marker-assisted selection, especially for the species of great importance to the seed market, e.g. corn, soybean, cotton, and sunflower. In the Brazilian public institutions few breeding programs use it efficiently. The possible reasons are: lack of know-how, lack of appropriate laboratories, few validated markers, high cost, and lack of urgency in obtaining cultivars. In this article we analyze the use and the constraints of marker-assisted selection in plant breeding programs of Brazilian public institutes

  11. Opportunities for Products of New Plant Breeding Techniques.

    Science.gov (United States)

    Schaart, Jan G; van de Wiel, Clemens C M; Lotz, Lambertus A P; Smulders, Marinus J M

    2016-05-01

    Various new plant breeding techniques (NPBT) have a similar aim, namely to produce improved crop varieties that are difficult to obtain through traditional breeding methods. Here, we review the opportunities for products created using NPBTs. We categorize products of these NPBTs into three product classes with a different degree of genetic modification. For each product class, recent examples are described to illustrate the potential for breeding new crops with improved traits. Finally, we touch upon the future applications of these methods, such as cisgenic potato genotypes in which specific combinations of Phytophthora infestans resistance genes have been stacked for use in durable cultivation, or the creation of new disease resistances by knocking out or removing S-genes using genome-editing techniques.

  12. Computer, Video, and Rapid-Cycling Plant Projects in an Undergraduate Plant Breeding Course.

    Science.gov (United States)

    Michaels, T. E.

    1993-01-01

    Studies the perceived effectiveness of four student projects involving videotape production, computer conferencing, microcomputer simulation, and rapid-cycling Brassica breeding for undergraduate plant breeding students in two course offerings in consecutive years. Linking of the computer conferencing and video projects improved the rating of the…

  13. Towards social acceptance of plant breeding by genome editing.

    Science.gov (United States)

    Araki, Motoko; Ishii, Tetsuya

    2015-03-01

    Although genome-editing technologies facilitate efficient plant breeding without introducing a transgene, it is creating indistinct boundaries in the regulation of genetically modified organisms (GMOs). Rapid advances in plant breeding by genome-editing require the establishment of a new global policy for the new biotechnology, while filling the gap between process-based and product-based GMO regulations. In this Opinion article we review recent developments in producing major crops using genome-editing, and we propose a regulatory model that takes into account the various methodologies to achieve genetic modifications as well as the resulting types of mutation. Moreover, we discuss the future integration of genome-editing crops into society, specifically a possible response to the 'Right to Know' movement which demands labeling of food that contains genetically engineered ingredients.

  14. Path-dependency in plant breeding: challenges facing participatory reforms in the Ethiopian Sorghum Improvement Program

    NARCIS (Netherlands)

    McGuire, S.J.

    2008-01-01

    Participatory plant breeding (PPB) seeks to involve farmers more closely in crop improvement in order to improve breeding impact. While PPB aims to reform breeding practice, there has been little analysis of the current practice breeding institutions. Such an analysis is necessary, both to

  15. Genetic resources: the basis for sustainable and competitive plant breeding

    Directory of Open Access Journals (Sweden)

    Luciano Lourenço Nass

    2012-12-01

    Full Text Available Plant genetic resources are the fuel for breeding, which in the search for higher yield and adapted genotypes, manipulates genes in order to meet the needs of farmers, and especially, of the current market. However, the use of accessions available in germplasm banks is low. Topics discussed in this paper emphasize the importance of plant genetic resources, and warn about problems related to genetic vulnerability; also, they discuss about aspects of costs involved in conservation and suggest recommendations for strengthening the area in Brazil.

  16. Tempo and mode in plant breeding system evolution.

    Science.gov (United States)

    Goldberg, Emma E; Igić, Boris

    2012-12-01

    Classic questions about trait evolution-including the directionality of character change and its interactions with lineage diversification-intersect in the study of plant breeding systems. Transitions from self-incompatibility to self-compatibility are frequent, and they may proceed within a species ("anagenetic" mode of breeding system change) or in conjunction with speciation events ("cladogenetic" mode of change). We apply a recently developed phylogenetic model to the nightshade family Solanaceae, quantifying the relative contributions of these two modes of evolution along with the tempo of breeding system change, speciation, and extinction. We find that self-incompatibility, a genetic mechanism that prevents self-fertilization, is lost largely by the cladogenetic mode. Self-compatible species are thus more likely to arise from the isolation of a newly self-compatible population than from species-wide fixation of self-compatible mutants. Shared polymorphism at the locus that governs self-incompatibility shows it to be ancestral and not regained within this family. We demonstrate that failing to account for cladogenetic character change misleads phylogenetic tests of evolutionary irreversibility, both for breeding system in Solanaceae and on simulated trees. © 2012 The Author(s). Evolution© 2012 The Society for the Study of Evolution.

  17. Plant breeding by using radiation mutation - Development of radiation indicator plants by molecular breeding

    Energy Technology Data Exchange (ETDEWEB)

    Liu, Jang Ryol; Kwak, Sang Soo; Kwon, Seok Yoon [Korea Research Institute of Bioscience and Biotechnology, Taejon (Korea)

    2000-04-01

    - tSOD1, cytosolic CuZnSOD cDNA was cloned from tobacco cDNA library by PCR. To develop the under-producing the transgenic plants, the vectors were constructed using by antisense and co-supressing technology. The transgenic tobacco plants were confirmed that over 60% of kanamycin-resistant plants were introduced the foreign gene by PCR and transformed one copy through Southern blot analysis. - In an attempt to identify marker genes for gamma irradiation of plants, expression patterns of diverse genes upon gamma irradiation of young tobacco plants were investigated. With the knowledge of distinctive expression patterns of diverse genes, irradiation-indicating marker plants could be developed by engineering and monitoring multiple radiation-responsive genes. Additionally, a gamma irradiation-responsive NtTMK1 receptor-like kinase gene was molecular biologically characterized. -Uranium reductase gene (Cytochrome C3) and radiation resistance gene (recA) have been cloned from Desulfovibrio and Deinococcus radiodurans. -Two plant transformation vectors (pCYC3 and pDrecA) have been constructed. - Tobacco transgenic plants of have been obtained. 52 refs., 5 figs. (Author)

  18. Plant hormone interactions: innovative targets for crop breeding and management.

    Science.gov (United States)

    Wilkinson, Sally; Kudoyarova, Guzel R; Veselov, Dmitry S; Arkhipova, Tatyana N; Davies, William J

    2012-05-01

    Here we highlight how both the root and shoot environment impact on whole plant hormone balance, particularly under stresses such as soil drying, and relate hormone ratios and relative abundances to processes influencing plant performance and yield under both mild and more severe stress. We discuss evidence (i) that abscisic acid (ABA) and ethylene act antagonistically on grain-filling rate amongst other yield-impacting processes; (ii) that ABA's effectiveness as an agent of stomatal closure can be modulated by coincident ethylene or cytokinin accumulation; and (iii) that enhanced cytokinin production can increase growth and yield by improving foliar stay-green indices under stress, and by improving processes that impact grain-filling and number, and that this can be the result of altered relative abundances of cytokinin and ABA (and other hormones). We describe evidence and novel processes whereby these phenomena are/could be amenable to manipulation through genetic and management routes, such that plant performance and yield can be improved. We explore the possibility that a range of ABA-ethylene and ABA-cytokinin relative abundances could represent targets for breeding/managing for yield resilience under a spectrum of stress levels between severe and mild, and could circumvent some of the pitfalls so far encountered in the massive research effort towards breeding for increases in the complex trait of yield.

  19. Selection and breeding of plant cultivars to minimize cadmium accumulation.

    Science.gov (United States)

    Grant, C A; Clarke, J M; Duguid, S; Chaney, R L

    2008-02-15

    Natural variation occurs in the uptake and distribution of essential and nonessential trace elements among crop species and among cultivars within species. Such variation can be responsible for trace element deficiencies and toxicities, which in turn can affect the quality of food. Plant breeding can be an important tool to both increase the concentration of desirable trace elements and reduce that of potentially harmful trace elements such as cadmium (Cd). Selection programs for a low-Cd content of various crops, including durum wheat, sunflower, rice and soybean have been established and low-Cd durum wheat cultivars and sunflower hybrids have been developed. In durum wheat (Triticum turgidum L. var durum), low-Cd concentration is controlled by a single dominant gene. The trait is highly heritable, and incorporation of the low-Cd allele can help to reduce the average grain Cd to levels below proposed international limits. The allele for low-Cd concentration does not appear to affect major economic traits and should not cause problems when incorporated into durum cultivars. The cost of Cd selection in a breeding program is initially large both in terms of Cd determination and reduced progress towards development of other economic traits, but declines as more breeding lines in the program carry the low-Cd trait and are utilized in new crosses. Production of low-Cd crop cultivars can be used as a tool to reduce the risk of movement of Cd into the human diet.

  20. Selection and breeding of plant cultivars to minimize cadmium accumulation

    Energy Technology Data Exchange (ETDEWEB)

    Grant, C.A. [AAFC Brandon Research Centre, Box 1000A, R.R. 3, Brandon, MB, R7A 5Y3 (Canada)], E-mail: cgrant@agr.gc.ca; Clarke, J.M. [AAFC Semiarid Prairie Agricultural Research Centre, Swift Current, SK, S9H 3X2 (Canada); Duguid, S. [AAFC Morden Research Station, Morden, MB, R6M 1Y5 (Canada); Chaney, R.L. [USDA, ARS, Animal Manure and Byproducts Laboratory, Room 013, Building 007, BARC-West, 10300 Baltimore Avenue, Beltsville, MD 20705-2350 (United States)

    2008-02-15

    Natural variation occurs in the uptake and distribution of essential and nonessential trace elements among crop species and among cultivars within species. Such variation can be responsible for trace element deficiencies and toxicities, which in turn can affect the quality of food. Plant breeding can be an important tool to both increase the concentration of desirable trace elements and reduce that of potentially harmful trace elements such as cadmium (Cd). Selection programs for a low-Cd content of various crops, including durum wheat, sunflower, rice and soybean have been established and low-Cd durum wheat cultivars and sunflower hybrids have been developed. In durum wheat (Triticum turgidum L. var durum), low-Cd concentration is controlled by a single dominant gene. The trait is highly heritable, and incorporation of the low-Cd allele can help to reduce the average grain Cd to levels below proposed international limits. The allele for low-Cd concentration does not appear to affect major economic traits and should not cause problems when incorporated into durum cultivars. The cost of Cd selection in a breeding program is initially large both in terms of Cd determination and reduced progress towards development of other economic traits, but declines as more breeding lines in the program carry the low-Cd trait and are utilized in new crosses. Production of low-Cd crop cultivars can be used as a tool to reduce the risk of movement of Cd into the human diet.

  1. The application of biotechnology in medicinal plants breeding research in China.

    Science.gov (United States)

    Huang, He-Ping; Li, Jin-Cai; Huang, Lu-Qi; Wang, Dian-Lei; Huang, Peng; Nie, Jiu-Sheng

    2015-07-01

    Breeding is not only an important area of medicinal plants research but also the foundation for the superior varieties acquirement of medicinal plants. The rise of modern biotechnology provides good opportunities and new means for medicinal plants breeding research in China. Biotechnology shows its technical advantages and new development prospects in breeding of new medicinal plants varieties with high and stable yield, good quality, as well as stress-resistance. In this paper, we describe recent advances, problems, and development prospects about the application of modern biotechnology in medicinal plants breeding research in China.

  2. Cultivation and breeding of Chinese medicinal plants in Germany.

    Science.gov (United States)

    Heuberger, Heidi; Bauer, Rudolf; Friedl, Fritz; Heubl, Günther; Hummelsberger, Josef; Nögel, Rainer; Seidenberger, Rebecca; Torres-Londoño, Paula

    2010-12-01

    Chinese herbal medicine (CHM) is increasingly used in Germany and Europe. Due to the need for herbal drugs of consistent quality and reliable supply, methods for commercial field cultivation and post-harvest processing under south German conditions have been developed for selected plant species used in CHM since 1999. The project used an interdisciplinary approach covering all aspects from seed sourcing to medicinal application. This paper describes the outcome of the agricultural seed and field experiments, breeding program, botanical and chemical characterization of the experimental material, comparison of experimental and imported herbal material with respect to their pharmaceutical quality, transfer of production methods and plant material to specialized farmers, medicinal application and, finally, information for users along the chain of distribution about the benefits of the locally produced herbal material. © Georg Thieme Verlag KG Stuttgart · New York.

  3. Investment, regulation, and uncertainty: managing new plant breeding techniques.

    Science.gov (United States)

    Smyth, Stuart J; McDonald, Jillian; Falck-Zepeda, Jose

    2014-01-01

    As with any technological innovation, time refines the technology, improving upon the original version of the innovative product. The initial GM crops had single traits for either herbicide tolerance or insect resistance. Current varieties have both of these traits stacked together and in many cases other abiotic and biotic traits have also been stacked. This innovation requires investment. While this is relatively straight forward, certain conditions need to exist such that investments can be facilitated. The principle requirement for investment is that regulatory frameworks render consistent and timely decisions. If the certainty of regulatory outcomes weakens, the potential for changes in investment patterns increases.   This article provides a summary background to the leading plant breeding technologies that are either currently being used to develop new crop varieties or are in the pipeline to be applied to plant breeding within the next few years. Challenges for existing regulatory systems are highlighted. Utilizing an option value approach from investment literature, an assessment of uncertainty regarding the regulatory approval for these varying techniques is undertaken. This research highlights which technology development options have the greatest degree of uncertainty and hence, which ones might be expected to see an investment decline.

  4. Consumers & plant genomics : the positioning and acceptance of a new plant breeding practice

    NARCIS (Netherlands)

    Heuvel, van den T.

    2008-01-01

    Innovative developments in technology, such as the emergence of genomics as a plant breeding practice, hold the potential to change the supply side of the market. The success of these practices not only depends on the improved efficiency and effectiveness it brings, but also on how well they are ali

  5. Consumers & plant genomics : the positioning and acceptance of a new plant breeding practice

    NARCIS (Netherlands)

    Heuvel, van den T.

    2008-01-01

    Innovative developments in technology, such as the emergence of genomics as a plant breeding practice, hold the potential to change the supply side of the market. The success of these practices not only depends on the improved efficiency and effectiveness it brings, but also on how well they are

  6. Unused natural variation can lift yield barriers in plant breeding.

    Directory of Open Access Journals (Sweden)

    Amit Gur

    2004-10-01

    Full Text Available Natural biodiversity is an underexploited sustainable resource that can enrich the genetic basis of cultivated plants with novel alleles that improve productivity and adaptation. We evaluated the progress in breeding for increased tomato (Solanum lycopersicum yield using genotypes carrying a pyramid of three independent yield-promoting genomic regions introduced from the drought-tolerant green-fruited wild species Solanum pennellii. Yield of hybrids parented by the pyramided genotypes was more than 50% higher than that of a control market leader variety under both wet and dry field conditions that received 10% of the irrigation water. This demonstration of the breaking of agricultural yield barriers provides the rationale for implementing similar strategies for other agricultural organisms that are important for global food security.

  7. Cisgenesis: an important sub-invention for traditional plant breeding companies

    NARCIS (Netherlands)

    Jacobsen, E.; Schouten, H.J.

    2009-01-01

    Modern plant breeding is highly dependent on new technologies to master future problems. More traits have to be combined, frequently originating from wild species. Traditional breeding is connected with linkage drag problems. The crop plant itself and its crossable species represent the traditional

  8. METHOD OF SKETCHES IN ARCHAEOGENETICS AND BREEDING OF AGRICULTURAL PLANTS

    Directory of Open Access Journals (Sweden)

    Tsatsenko L. V.

    2015-02-01

    Full Text Available The issues associated with visualization images of the examined object and the method of sketches or visual notes have been discussed in the article. The images of lagenaria (bottle, shape pumpkins or gourds in works of art and agrobotanic illustration as a research tool have been selected, with the aim to conduct a visual analysis of the morphological characteristics of bottle gourd for further application of the knowledge gained in archaeogenetics and plant breeding. The article presents images of plants of lagenaria for the period from 1311 to 2014 years. Visual analysis of the morphological characteristics of lagenaria on the basis of visual notes allowed us to identify several key points: the polymorphism of fruits and different duration of the vegetation period, particularly of the reproductive system, which is characterized by different proportions of male and female flowers, the presence of pollinators, night flowering, fruit pubescence on the first stages of development, polymorphism seeds, features maturation based on the size and weight of the fetus. Understanding the range of individual development allows the breeder to submit a complete selection issue, search for new signs will touch the ancient forms of the object, diseases, pests, images which have remained only on the pictures. In our opinion, the method of visual notes can be successfully used in the educational process because it stimulates creativity and cognitive activity of students to search for information about the studied object and its reflection

  9. Physics and agriculture: applied optics to plant fertilization and breeding

    Science.gov (United States)

    Diomandé, K.; Soro, P. A.; Zoro, G. H.; Krou, V. A.

    2011-08-01

    The economy of Côte d'Ivoire rests on the agriculture. In order to contribute to the development of this agriculture, we have oriented our research field on applied optics to agriculture. Then, our research concerns mainly the Laser Induced chlorophyll fluorescence in plants. A simple laser-induced fluorescence set up has been designed and built at the Laboratory of Crystallography and Molecular Physics (LaCPM) at the University of Cocody (Abidjan, COTE D'IVOIRE). With this home set up we first have studied the fluorescence spectra of the "chlorophyll" to characterize the potassium deficiency in oil palm (Elaeis guineensis Jacq,). However, we found that the results differed for samples along terraced plots. The study of this phenomenon called "border effect", has enabled us to realize that sampling should be done after two rows of safety in each plot. We also applied the Laser Induced chlorophyll fluorescence technique to improve the plant breeding. For this, we have characterized the rubber tree seedlings in nurseries. And so we have highlighted those sensible to drought and resistant ones.

  10. Traditional and modern plant breeding methods with examples in rice (Oryza sativa L.).

    Science.gov (United States)

    Breseghello, Flavio; Coelho, Alexandre Siqueira Guedes

    2013-09-01

    Plant breeding can be broadly defined as alterations caused in plants as a result of their use by humans, ranging from unintentional changes resulting from the advent of agriculture to the application of molecular tools for precision breeding. The vast diversity of breeding methods can be simplified into three categories: (i) plant breeding based on observed variation by selection of plants based on natural variants appearing in nature or within traditional varieties; (ii) plant breeding based on controlled mating by selection of plants presenting recombination of desirable genes from different parents; and (iii) plant breeding based on monitored recombination by selection of specific genes or marker profiles, using molecular tools for tracking within-genome variation. The continuous application of traditional breeding methods in a given species could lead to the narrowing of the gene pool from which cultivars are drawn, rendering crops vulnerable to biotic and abiotic stresses and hampering future progress. Several methods have been devised for introducing exotic variation into elite germplasm without undesirable effects. Cases in rice are given to illustrate the potential and limitations of different breeding approaches.

  11. Plant breeding in the turn of the millennium

    Directory of Open Access Journals (Sweden)

    Aluízio Borém

    1998-01-01

    Full Text Available The transition from hunting and gathering to farming happened about 10,000 years ago, independently and diffusely in several places in the world. Plant breeders were responsible for genetic progress in a number of crop species. It included hybrids, the introgression of wild species genes and also the Green Revolution, which started in the 1960's with the cereals. The varieties developed by breeding, along with the use of new crop technology (fertilization, soil tillage, etc. changed the status of some countries from importers to exporters of food. In the turn of the millennium,, plant breeding, faces new challenges in a globalized world, but it has new tools to deal with them. Notwithstanding the present contributions of plant breeding and crop management, its future contributions may be even greater. The partnership being developed between plant breeding and biotechnology will assure a more consistent and predictable genetic progress. Current contributions of biotechnology have arrived for many crops in different places of the world. Varieties developed by transformation are grown in large acreage in some countries. Some concerns have also arisen from the use of GMOs. For example, the introgression of a gene for insect resistance 4 into many different species could result in an undesirable endemic risk, here called interespecific biotechnological vulnerability. Another concern is that biotechnology race may create yield plateaus in programs using genes pyramiding for all new traits made available by biotechnology, resulting in what is called genetic gridlock. Nevertheless, the benefits of using biotechnology will substantially enhance the contributions of plant breeding to human lifeA transição da fase de coleta e caça para a agricultura ocorreu há cerca de dez mil anos independentemente e em vários locais no mundo. Naquela época iniciou-se a domesticação da maioria das espécies cultivadas, dando início às atividades agrícolas. Os

  12. The Power of CRISPR-Cas9-Induced Genome Editing to Speed Up Plant Breeding

    Directory of Open Access Journals (Sweden)

    Hieu X. Cao

    2016-01-01

    Full Text Available Genome editing with engineered nucleases enabling site-directed sequence modifications bears a great potential for advanced plant breeding and crop protection. Remarkably, the RNA-guided endonuclease technology (RGEN based on the clustered regularly interspaced short palindromic repeats (CRISPR and CRISPR-associated protein 9 (Cas9 is an extremely powerful and easy tool that revolutionizes both basic research and plant breeding. Here, we review the major technical advances and recent applications of the CRISPR-Cas9 system for manipulation of model and crop plant genomes. We also discuss the future prospects of this technology in molecular plant breeding.

  13. The Power of CRISPR-Cas9-Induced Genome Editing to Speed Up Plant Breeding

    Science.gov (United States)

    Wang, Wenqin; Le, Hien T. T.

    2016-01-01

    Genome editing with engineered nucleases enabling site-directed sequence modifications bears a great potential for advanced plant breeding and crop protection. Remarkably, the RNA-guided endonuclease technology (RGEN) based on the clustered regularly interspaced short palindromic repeats (CRISPR) and CRISPR-associated protein 9 (Cas9) is an extremely powerful and easy tool that revolutionizes both basic research and plant breeding. Here, we review the major technical advances and recent applications of the CRISPR-Cas9 system for manipulation of model and crop plant genomes. We also discuss the future prospects of this technology in molecular plant breeding. PMID:28097123

  14. Utilization of {gamma}-irradiation technique on plant mutation breeding and plant growth regulation in Tokyo Metropolitan Isotope Research Center

    Energy Technology Data Exchange (ETDEWEB)

    Suda, Hirokatsu [Tokyo Metropolitan Isotope Research Center (Japan)

    1997-03-01

    During about 30-years, we have developed {gamma}-irradiation technique and breeding back pruning method for the study of mutation breeding of ornamental plants. As a result, we have made a wide variety of new mutant lines in chrysanthemum, narcissus, begonia rex, begonia iron cross, winter daphne, zelkova, sweet-scented oleander, abelia, kobus, and have obtained 7 plant patents. By the use of {gamma}-irradiation to plant mutation breeding, we often observed that plants irradiated by low dose of {gamma}-rays showed superior or inferior growth than the of non-irradiated plants. Now, we established the irradiation conditions of {gamma}-rays for mutation breeding and growth of regulation in narcissus, tulip, Enkianthus perulatus Schneid., komatsuna, moyashi, african violet. In most cases, irradiation dose rate is suggested to be a more important factor to induce plant growth regulators than irradiation dose. (author)

  15. Effectors as tools in disease resistance breeding against biotrophic, hemibiotrophic, and necrotrophic plant pathogens.

    Science.gov (United States)

    Vleeshouwers, Vivianne G A A; Oliver, Richard P

    2014-03-01

    One of most important challenges in plant breeding is improving resistance to the plethora of pathogens that threaten our crops. The ever-growing world population, changing pathogen populations, and fungicide resistance issues have increased the urgency of this task. In addition to a vital inflow of novel resistance sources into breeding programs, the functional characterization and deployment of resistance also needs improvement. Therefore, plant breeders need to adopt new strategies and techniques. In modern resistance breeding, effectors are emerging as tools to accelerate and improve the identification, functional characterization, and deployment of resistance genes. Since genome-wide catalogues of effectors have become available for various pathogens, including biotrophs as well as necrotrophs, effector-assisted breeding has been shown to be successful for various crops. "Effectoromics" has contributed to classical resistance breeding as well as for genetically modified approaches. Here, we present an overview of how effector-assisted breeding and deployment is being exploited for various pathosystems.

  16. Concepts and strategies of organic plant breeding in light of novel breeding techniques

    NARCIS (Netherlands)

    Nuijten, Edwin; Messmer, Monika M.; Lammerts van Bueren, Edith

    2017-01-01

    In this paper, we describe the development of a set of guiding principles for the evaluation of breeding techniques by the organic sector over time. The worldwide standards of organic agriculture (OA) do not allow genetic engineering (GE) or any products derived from genetic engineering. The

  17. Use of radiation for plant breeding in Japan: results and future

    Energy Technology Data Exchange (ETDEWEB)

    Yamaguchi, I. [National Institute of Agricultural Resource, Tsukuba, Ibaraki (Japan)

    1998-12-31

    In 1966, as the first breeds by radiation mutation in Japan, `Reimei`, a rice variety with increased lodging resistance by short culm mutation and Raiden`, an early variety by mutation of soybean obtained by extreme late variety with nematoda resistance were bred and registered in the Ministry of Agriculture and Forestry. Since these characteristics of `short culm` and early maturing` have a comparatively high mutation rate and ease of selection, among seed propagation crops many kinds of those varieties improved to have either of these characteristics or both of them at the same time by mutation breeding are bred. In Japan, varieties bred by use of mutation breeding count 107 (as of April 1998). Among crops, that with the most varieties is chrysanthemum, which has 20 varieties and the next is rice with 15 varieties. The other 38 varieties of crops such as grains, beans, industrial crops, vegetables, flowering plants, flowering trees and fruit trees, mutation breeding varieties are widely bred. Among mutagens used, gamma ray holds 80%. The recent development in the research of DNA recombination is amazing and plant bodies which have introduced useful genes which other plants have are being obtained. Radiation mutation breeding, however, has the advantages of breeding new varieties by improving only one or two characteristics of excellent races. Radiation mutation breeding and DNA recombination technologies, therefore, may need to be utilized separately according to respective purposes. In the future, for radiation mutation breeding, mutants with quality characteristics which others do not have, corresponding to the diverse demand on agricultural products must come to be required. On the other hand, by the crops like banana for which ordinary breeding is almost impossible, the expectation for radiation mutation breeding will be more and more heightened. In addition, the accumulation of studies on controlling the direction of mutation which has been regarded

  18. Micronutrient fortification of plants through plant breeding: can it improve nutrition in man at low cost?

    Science.gov (United States)

    Bouis, Howarth E

    2003-05-01

    Can commonly-eaten food staple crops be developed that fortify their seeds with essential minerals and vitamins? Can farmers be induced to grow such varieties? If so, would this result in a marked improvement in human nutrition at a lower cost than existing nutrition interventions? An interdisciplinary international effort is underway to breed for mineral- and vitamin-dense varieties of rice, wheat, maize, beans and cassava for release to farmers in developing countries. The biofortification strategy seeks to take advantage of the consistent daily consumption of large amounts of food staples by all family members, including women and children as they are most at risk for micronutrient malnutrition. As a consequence of the predominance of food staples in the diets of the poor, this strategy implicitly targets low-income households. After the one-time investment is made to develop seeds that fortify themselves, recurrent costs are low and germplasm may be shared internationally. It is this multiplier aspect of plant breeding across time and distance that makes it so cost-effective. Once in place, the biofortified crop system is highly sustainable. Nutritionally-improved varieties will continue to be grown and consumed year after year, even if government attention and international funding for micronutrient issues fades. Biofortification provides a truly feasible means of reaching malnourished populations in relatively remote rural areas, delivering naturally-fortified foods to population groups with limited access to commercially-marketed fortified foods that are more readily available in urban areas. Biofortification and commercial fortification are, therefore, highly complementary. Breeding for higher trace mineral density in seeds will not incur a yield penalty. Mineral-packed seeds sell themselves to farmers because, as recent research has shown, these trace minerals are essential in helping plants resist disease and other environmental stresses. More seedlings

  19. Genomic prediction unifies animal and plant breeding programs to form platforms for biological discovery

    DEFF Research Database (Denmark)

    Hickey, John M.; Chiurugwi, Tinashe; Mackay, Ian

    2017-01-01

    The rate of annual yield increases for major staple crops must more than double relative to current levels in order to feed a predicted global population of 9 billion by 2050. Controlled hybridization and selective breeding have been used for centuries to adapt plant and animal species for human...... that unifies breeding approaches, biological discovery, and tools and methods. Here we compare and contrast some animal and plant breeding approaches to make a case for bringing the two together through the application of genomic selection. We propose a strategy for the use of genomic selection as a unifying...... use. However, achieving higher, sustainable rates of improvement in yields in various species will require renewed genetic interventions and dramatic improvement of agricultural practices. Genomic prediction of breeding values has the potential to improve selection, reduce costs and provide a platform...

  20. Genomic prediction unifies animal and plant breeding programs to form platforms for biological discovery.

    Science.gov (United States)

    Hickey, John M; Chiurugwi, Tinashe; Mackay, Ian; Powell, Wayne

    2017-08-30

    The rate of annual yield increases for major staple crops must more than double relative to current levels in order to feed a predicted global population of 9 billion by 2050. Controlled hybridization and selective breeding have been used for centuries to adapt plant and animal species for human use. However, achieving higher, sustainable rates of improvement in yields in various species will require renewed genetic interventions and dramatic improvement of agricultural practices. Genomic prediction of breeding values has the potential to improve selection, reduce costs and provide a platform that unifies breeding approaches, biological discovery, and tools and methods. Here we compare and contrast some animal and plant breeding approaches to make a case for bringing the two together through the application of genomic selection. We propose a strategy for the use of genomic selection as a unifying approach to deliver innovative 'step changes' in the rate of genetic gain at scale.

  1. Designing Graduate-Level Plant Breeding Curriculum: A Delphi Study of Private Sector Stakeholder Opinions

    Science.gov (United States)

    Miller, Jane K.; Repinski, Shelby L.; Hayes, Kathryn N.; Bliss, Frederick A.; Trexler, Cary J.

    2011-01-01

    A broad-based survey using the Delphi method was conducted to garner current information from private sector stakeholders and build consensus opinions supporting key ideas for enhancing plant breeder education and training. This study asked respondents to suggest and rate topics and content they deemed most important to plant breeding graduate…

  2. Analysis on potential approaches to utilize genic male sterility in plant hybrid breeding

    Institute of Scientific and Technical Information of China (English)

    Li Xinqi; Yuan Longping; Xiao Jinhua; Xie fangming

    2005-01-01

    @@ The exploitation of plant heterosis is an effective approach to increasing the food production. The heterotic hybrid varieties in major crops such as rice,cotton, and wheat can show more than 20% yield advantage over best conventional ones under the same cultivation conditions. The difficulties in breeding elite male sterile lines and the inconveniences for commercial hybrid seed production are hampering the development of hybrid crops breeding.

  3. The plant breeding industry after pure line theory: Lessons from the National Institute of Agricultural Botany.

    Science.gov (United States)

    Berry, Dominic

    2014-06-01

    In the early twentieth century, Wilhelm Johannsen proposed his pure line theory and the genotype/phenotype distinction, work that is prized as one of the most important founding contributions to genetics and Mendelian plant breeding. Most historians have already concluded that pure line theory did not change breeding practices directly. Instead, breeding became more orderly as a consequence of pure line theory, which structured breeding programmes and eliminated external heritable influences. This incremental change then explains how and why the large multi-national seed companies that we know today were created; pure lines invited standardisation and economies of scale that the latter were designed to exploit. Rather than focus on breeding practice, this paper examines the plant varietal market itself. It focusses upon work conducted by the National Institute of Agricultural Botany (NIAB) during the interwar years, and in doing so demonstrates that, on the contrary, the pure line was actually only partially accepted by the industry. Moreover, claims that contradicted the logic of the pure line were not merely tolerated by the agricultural geneticists affiliated with NIAB, but were acknowledged and legitimised by them. The history of how and why the plant breeding industry was transformed remains to be written.

  4. Development of radiation indicator plants by molecular breeding

    Energy Technology Data Exchange (ETDEWEB)

    Liu, Jang-Ryol; Min, Sung-Ran; Jeong, Won-Joong; Kwak, Sang-Soo; Lee, Haeng-Soon; Kwon, Seok-Yoon; Pai, Hyun-Sook; Cho, Hye-Sun; In, Dong-Su; Oh, Seung-Chol; Park, Sang- Gyu; Woo, Je-Wook; Kin, Tae-Hwan; Park, Ju-Hyun; Kim, Chang-Sook [Korea Research Institute of Bioscience and Biotechnology, Taejeon (Korea)

    2001-04-01

    To develop the transgenic plants with low level of antioxidant enzyme, transgenic tobacco plants (157 plants) using 8 different plant expression vectors which have APX genes in sense or antisense orientation under the control of CaMV 35S promoter or stress-inducible SWPA2 promoter were developed. The insertion of transgene in transgenic plants was confirmed by PCR analysis. The total APX activities of transgenic plants were enhanced or reduced by introduction of APX gene in plants. To clone the radiation-responsive genes and their promoter from plants, the NeIF2Bb, one of radiation-responsive genes from tobacco plant was characterized using molecular and cell biological tools. Promoter of GST6, a radiation-responsive gene, was cloned using RT-PCR. The GST6 promoter sequence was analyzed, and known sequence motif was searched. To develop the remediation technology of radioactively contaminated soil using transgenic plants uranium reductase and radiation resistance genes have been introduced in tobacco and indian mustard plans. The uranium reductase and radiation resistance (RecA) genes were confirmed in transgenic tobacco and indian mustard plants by PCR analysis. Also, Gene expression of uranium reductase and radiation resistance were confirmed in transgenic indian mustard plants by northern blot analysis. 42 refs., 12 figs. (Author)

  5. Translational genomics for plant breeding with the genome sequence explosion.

    Science.gov (United States)

    Kang, Yang Jae; Lee, Taeyoung; Lee, Jayern; Shim, Sangrea; Jeong, Haneul; Satyawan, Dani; Kim, Moon Young; Lee, Suk-Ha

    2016-04-01

    The use of next-generation sequencers and advanced genotyping technologies has propelled the field of plant genomics in model crops and plants and enhanced the discovery of hidden bridges between genotypes and phenotypes. The newly generated reference sequences of unstudied minor plants can be annotated by the knowledge of model plants via translational genomics approaches. Here, we reviewed the strategies of translational genomics and suggested perspectives on the current databases of genomic resources and the database structures of translated information on the new genome. As a draft picture of phenotypic annotation, translational genomics on newly sequenced plants will provide valuable assistance for breeders and researchers who are interested in genetic studies.

  6. Natural transformation in plant breeding - a biotechnological platform for quality improvement of ornamental, agricultural and medicinal plants

    DEFF Research Database (Denmark)

    Lütken, Henrik Vlk; Hegelund, Josefine Nymark; Himmelboe, Martin;

    2015-01-01

    Compactness is a desirable trait in ornamental plant breeding because it is preferred by producers, distributors and consumers. Presently, in ornamental plant production growth of many potted plants is regulated by application of chemical growth retardants, several of which are harmful to both......, decreased plant height, short internodes, reduced apical dominance and changes in flower characteristics. Several of these traits improve ornamental plant quality and may also benefit characteristics useful in agricultural field crops. In addition, a number of regenerated plants derived from hairy roots...

  7. Invasion Success by Plant Breeding Evolutionary Changes as a Critical Factor for the Invasion of the Ornamental Plant Mahonia aquifolium

    CERN Document Server

    Ross, Christel Anne

    2009-01-01

    Invasive species are a major threat to global biodiversity and cause significant economic costs. Studying biological invasions is both essential for preventing future invasions and is also useful in order to understand basic ecological processes. Christel Ross investigates whether evolutionary changes by plant breeding are a relevant factor for the invasion success of Mahonia aquifolium in Germany. Her findings show that invasive populations differ from native populations in quantitative-genetic traits and molecular markers, whereas their genetic diversity is similar. She postulates that these evolutionary changes are rather a result of plant breeding, which includes interspecific hybridisation, than the result of a genetic bottleneck or the releases from specialist herbivores.

  8. Plant breeding and rural development in the United States.

    Science.gov (United States)

    KE Woeste; SB Blanche; KA Moldenhauer; CD Nelson

    2010-01-01

    Plant breeders contributed enormously to the agricultural and economic development of the United States. By improving the profitability of farming, plant breeders improved the economic condition of farmers and contributed to the growth and structure of rural communities. In the years since World War II, agriculture and the quality of rural life have been driven by...

  9. Intellectual property rights, international trade and plant breeding

    NARCIS (Netherlands)

    Eaton, D.J.F.

    2013-01-01

    Seed is the physical embodiment of the invention of the plant breeder. Plant varieties thus constitute a special form of innovation, and an assessment of intellectual property right (IPR) systems needs to take this into account. This thesis concentrates on IPRs but breeders do have a number of means

  10. BreedVision — A Multi-Sensor Platform for Non-Destructive Field-Based Phenotyping in Plant Breeding

    Science.gov (United States)

    Busemeyer, Lucas; Mentrup, Daniel; Möller, Kim; Wunder, Erik; Alheit, Katharina; Hahn, Volker; Maurer, Hans Peter; Reif, Jochen C.; Würschum, Tobias; Müller, Joachim; Rahe, Florian; Ruckelshausen, Arno

    2013-01-01

    To achieve the food and energy security of an increasing World population likely to exceed nine billion by 2050 represents a major challenge for plant breeding. Our ability to measure traits under field conditions has improved little over the last decades and currently constitutes a major bottleneck in crop improvement. This work describes the development of a tractor-pulled multi-sensor phenotyping platform for small grain cereals with a focus on the technological development of the system. Various optical sensors like light curtain imaging, 3D Time-of-Flight cameras, laser distance sensors, hyperspectral imaging as well as color imaging are integrated into the system to collect spectral and morphological information of the plants. The study specifies: the mechanical design, the system architecture for data collection and data processing, the phenotyping procedure of the integrated system, results from field trials for data quality evaluation, as well as calibration results for plant height determination as a quantified example for a platform application. Repeated measurements were taken at three developmental stages of the plants in the years 2011 and 2012 employing triticale (×Triticosecale Wittmack L.) as a model species. The technical repeatability of measurement results was high for nearly all different types of sensors which confirmed the high suitability of the platform under field conditions. The developed platform constitutes a robust basis for the development and calibration of further sensor and multi-sensor fusion models to measure various agronomic traits like plant moisture content, lodging, tiller density or biomass yield, and thus, represents a major step towards widening the bottleneck of non-destructive phenotyping for crop improvement and plant genetic studies. PMID:23447014

  11. Genome elimination: translating basic research into a future tool for plant breeding.

    Science.gov (United States)

    Comai, Luca

    2014-06-01

    During the course of our history, humankind has been through different periods of agricultural improvement aimed at enhancing our food supply and the performance of food crops. In recent years, it has become apparent that future crop improvement efforts will require new approaches to address the local challenges of farmers while empowering discovery across industry and academia. New plant breeding approaches are needed to meet this challenge to help feed a growing world population. Here I discuss how a basic research discovery is being translated into a potential future tool for plant breeding, and share the story of researcher Simon Chan, who recognized the potential application of this new approach--genome elimination--for the breeding of staple food crops in Africa and South America.

  12. Genome elimination: translating basic research into a future tool for plant breeding.

    Directory of Open Access Journals (Sweden)

    Luca Comai

    2014-06-01

    Full Text Available During the course of our history, humankind has been through different periods of agricultural improvement aimed at enhancing our food supply and the performance of food crops. In recent years, it has become apparent that future crop improvement efforts will require new approaches to address the local challenges of farmers while empowering discovery across industry and academia. New plant breeding approaches are needed to meet this challenge to help feed a growing world population. Here I discuss how a basic research discovery is being translated into a potential future tool for plant breeding, and share the story of researcher Simon Chan, who recognized the potential application of this new approach--genome elimination--for the breeding of staple food crops in Africa and South America.

  13. Toward breeding new land-sea plant hybrid species irrigable with seawater for dry regions.

    Science.gov (United States)

    Moustafa, Khaled

    2015-01-01

    A plant species growing in sea or coastal saltmarsh is greatly tolerant to high concentrations of salts, and a plant species growing in desert or dry regions is highly tolerant to drought. Breeding a new plant hybrid species from both species by means of cellular grafting, genome fusion or nuclear transfer would generate, at least in theory, a hybrid plant species that should be strongly tolerant to harsh aridity and salinity and would be potentially irrigable with seawater. Such prospective species can be used for example as a fodder, biofuel crop or stabilizer species to protect soil from wind erosion and sandy storms in dry regions. Breeding such species would change the surface of the world and help to solve major challenges of starvation, malnutrition and poverty. Here, I propose potential approaches that would be worthy of investigation toward this purpose.

  14. Germplasm-regression-combined (GRC) marker-trait association identification in plant breeding: a challenge for plant biotechnological breeding under soil water deficit conditions.

    Science.gov (United States)

    Ruan, Cheng-Jiang; Xu, Xue-Xuan; Shao, Hong-Bo; Jaleel, Cheruth Abdul

    2010-09-01

    In the past 20 years, the major effort in plant breeding has changed from quantitative to molecular genetics with emphasis on quantitative trait loci (QTL) identification and marker assisted selection (MAS). However, results have been modest. This has been due to several factors including absence of tight linkage QTL, non-availability of mapping populations, and substantial time needed to develop such populations. To overcome these limitations, and as an alternative to planned populations, molecular marker-trait associations have been identified by the combination between germplasm and the regression technique. In the present preview, the authors (1) survey the successful applications of germplasm-regression-combined (GRC) molecular marker-trait association identification in plants; (2) describe how to do the GRC analysis and its differences from mapping QTL based on a linkage map reconstructed from the planned populations; (3) consider the factors that affect the GRC association identification, including selections of optimal germplasm and molecular markers and testing of identification efficiency of markers associated with traits; and (4) finally discuss the future prospects of GRC marker-trait association analysis used in plant MAS/QTL breeding programs, especially in long-juvenile woody plants when no other genetic information such as linkage maps and QTL are available.

  15. Intellectual property rights for agriculture in international trade and investment agreements: A plant breeding perspective

    NARCIS (Netherlands)

    Eaton, D.J.F.; Louwaars, N.P.; Tripp, R.

    2006-01-01

    The agricultural sector, and in particular plant breeding, is one area where this flexibility of intellectual property rights (IPR) is quite broad. This note argues that policymakers need to pay close attention to the role that IPRs can play in agricultural development by providing incentives for

  16. Climate Change Effects to Plant Ecosystems - Genetic Resources for Future Barley Breeding

    DEFF Research Database (Denmark)

    Ingvordsen, Cathrine Heinz

    were identified for possible use in breeding of climate resilient cultivars and SNP-markers that link to traits favourable in changed environments. Basic knowledge of plant response to multifactor climate treatments has been added as well as data on numerous genotypes modeling the impact of climate...

  17. Fantasy Seed Company: A Role Playing Game for Plant Breeding Courses

    Science.gov (United States)

    Hague, Steve S.

    2011-01-01

    Understanding plant breeding as well as procedures and issues of seed companies are skills students studying agronomy need to acquire. Simulation games can be effective teaching tools in developing higher-order thinking skills of students. The "Fantasy Seed Company" game was developed to create motivated learners by allowing students to run a mock…

  18. Effectors as Tools in Disease Resistance Breeding Against Biotrophic, Hemibiotrophic, and Necrotrophic Plant Pathogens

    NARCIS (Netherlands)

    Vleeshouwers, V.G.A.A.; Oliver, R.P.

    2014-01-01

    One of most important challenges in plant breeding is improving resistance to the plethora of pathogens that threaten our crops. The ever-growing world population, changing pathogen populations, and fungicide resistance issues have increased the urgency of this task. In addition to a vital inflow of

  19. Participatory Plant Breeding with Traders and Farmers for White Pea Bean in Ethiopia

    Science.gov (United States)

    Assefa, T.; Sperling, L.; Dagne, B.; Argaw, W.; Tessema, D.; Beebe, S.

    2014-01-01

    Purpose: This research, conducted in Ethiopia, involved select stakeholders in the variety evaluation process early: to identify a greater number of acceptable varieties and to shorten a lengthy research and release process. Design/methodology/approach: A Participatory Plant Breeding (PPB) approach was used in both on-station and community-based…

  20. Fantasy Seed Company: A Role Playing Game for Plant Breeding Courses

    Science.gov (United States)

    Hague, Steve S.

    2011-01-01

    Understanding plant breeding as well as procedures and issues of seed companies are skills students studying agronomy need to acquire. Simulation games can be effective teaching tools in developing higher-order thinking skills of students. The "Fantasy Seed Company" game was developed to create motivated learners by allowing students to run a mock…

  1. How to effectively deploy plant resistances to pests and pathogens in crop breeding

    NARCIS (Netherlands)

    Seifi Abdolabad, A.R.; Visser, R.G.F.; Bai, Y.

    2013-01-01

    Food shortage is currently a serious worldwide problem, and the fact that it will become an even greater problem in the coming decades underscores the necessity for more translational research in plant sciences that is directed towards crop breeding. Biotic stresses are important determinants of red

  2. Deciphering plant-pathogen communication: fresh perspectives for molecular resistance breeding.

    Science.gov (United States)

    Hammond-Kosack, Kim E; Parker, Jane E

    2003-04-01

    Activation of local and systemic plant defences in response to pathogen attack involves dramatic cellular reprogramming. Over the past 10 years many novel genes, proteins and molecules have been discovered as a result of investigating plant-pathogen interactions. Most attempts to harness this knowledge to engineer improved disease resistance in crops have failed. Although gene efficacy in transgenic plants has often been good, commercial exploitation has not been possible because of the detrimental effects on plant growth, development and crop yield. Biotechnology approaches have now shifted emphasis towards marker-assisted breeding and the construction of vectors containing highly regulated transgenes that confer resistance in several distinct ways.

  3. Current status of molecular biological techniques for plant breeding in the Republic of Korea

    Energy Technology Data Exchange (ETDEWEB)

    Sohn, Seong-Han; Lee, Si-Myung; Park, Bum-Seok; Yun, In-Sun; Goo, Doe-Hoe; Kim, Seok-Dong [Rural Development Administration, National Institute of Agricultural Science and Technology, Suwon (Korea)

    2002-02-01

    Classical plant breeding has played an important role in developing new varieties in current agriculture. For decades, the technique of cross-pollination has been popular for breeding in cereal and horticultural crops to introduce special traits. However, recently the molecular techniques get widely accepted as an alternative tool in both introducing a useful trait for developing the new cultivars and investigating the characteristics of a trait in plant, like the identification of a gene. Using the advanced molecular technique, several genetically modified (GM) crops (e.g., Roundup Ready Soybean, YieldGard, LibertyLink etc.) became commercially cultivated and appeared in the global market since 1996. The GM crops, commercially available at the moment, could be regarded as successful achievements in history of crop breeding conferring the specific gene into economically valuable crops to make them better. Along with such achievements, on the other hand these new crops have also caused the controversial debate on the safety of GM crops as human consumption and environmental release as well. Nevertheless, molecular techniques are widespread and popular in both investigating the basic science of plant biology and breeding new varieties compared to their conventional counterparts. Thus, the Department of Bioresources at the National Institute of Agricultural Science and Technology (NIAST) has been using the molecular biological techniques as a complimentary tool for the improvement of crop varieties for almost two decades. (author)

  4. Participatory plant breeding and organic agriculture: A synergistic model for organic variety development in the United States

    Directory of Open Access Journals (Sweden)

    Adrienne C. Shelton

    2016-12-01

    Full Text Available Abstract Organic farmers require improved varieties that have been adapted to their unique soils, nutrient inputs, management practices, and pest pressures. One way to develop adapted varieties is to situate breeding programs in the environment of intended use, such as directly on organic farms, and in collaboration with organic farmers. This model is a form of participatory plant breeding, and was originally created in order to meet the needs of under-served, small-scale farmers in developing countries. A robust body of literature supports the quantitative genetic selection theory of participatory plant breeding, and helps to explain its increasing prevalence among organic breeding projects in the United States. The history of the organic farming movement in the United States highlights the cultural relevance of engaging organic farmers in the breeding process, complementing the biological rationale for participatory plant breeding. In addition, limited private investment in organic plant breeding encourages the involvement of plant breeders at public institutions. This paper synthesizes the biological, cultural, and economic justifications for utilizing participatory plant breeding as an appropriate methodology for organic cultivar development.

  5. Mutagenesis as a tool in plant genetics, functional genomics, and breeding.

    Science.gov (United States)

    Sikora, Per; Chawade, Aakash; Larsson, Mikael; Olsson, Johanna; Olsson, Olof

    2011-01-01

    Plant mutagenesis is rapidly coming of age in the aftermath of recent developments in high-resolution molecular and biochemical techniques. By combining the high variation of mutagenised populations with novel screening methods, traits that are almost impossible to identify by conventional breeding are now being developed and characterised at the molecular level. This paper provides a comprehensive overview of the various techniques and workflows available to researchers today in the field of molecular breeding, and how these tools complement the ones already used in traditional breeding. Both genetic (Targeting Induced Local Lesions in Genomes; TILLING) and phenotypic screens are evaluated. Finally, different ways of bridging the gap between genotype and phenotype are discussed.

  6. Recent Progress Using High-throughput Sequencing Technologies in Plant Molecular Breeding

    Institute of Scientific and Technical Information of China (English)

    Qiang Gao; Guidong Yue; Wenqi Li; Junyi Wang; Jiaohui Xu; Ye Yin

    2012-01-01

    High-throughput sequencing is a revolutionary technological innovation in DNA sequencing.This technology has an ultra-low cost per base of sequencing and an overwhelmingly high data output.High-throughput sequencing has brought novel research methods and solutions to the research fields of genomics and post-genomics.Furthermore,this technology is leading to a new molecular breeding revolution that has landmark significance for scientific research and enables us to launch multi-level,multifaceted,and multi-extent studies in the fields of crop genetics,genomics,and crop breeding.In this paper,we review progress in the application of high-throughput sequencing technologies to plant molecular breeding studies.

  7. Be-Breeder - Learning: a new tool for teaching and learning plant breeding principles

    Directory of Open Access Journals (Sweden)

    Roberto Fritsche-Neto

    2016-09-01

    Full Text Available The Be-Breeder application is an on-line tool constructed through the R software for the purpose of assisting in some of the main genetic and statistical analyses related to the area of plant breeding. In addition, Be-Breeder provides a section called “Learning”, which in a simple click-point manner allows explanation of theories related to the effect of inbreeding, population structure, qualitative and quantitative traits, heterosis, population size, effect of selection, and composition of hybrids. Be-Breeder is available for network use on the website of the Allogamous Plant Breeding Laboratory (Laboratório de Melhoramento de Plantas Alógamas of ESALQ-USP through the link: http://www.genetica.esalq.usp.br/alogamas/R.html.

  8. Food science meets plant science: A case study on improved nutritional quality by breeding for glucosinolate retention during food processing

    NARCIS (Netherlands)

    Hennig, K.; Verkerk, R.; Boekel, van M.A.J.S.; Dekker, M.; Bonnema, A.B.

    2014-01-01

    Nutritional quality of vegetables is affected by several steps in the food chain. Up to now the effects of these different steps are mostly studied separately. We propose the cooperation between plant breeding and food technology by using food technological parameters as breeding traits to identify

  9. Integrated genomics and molecular breeding approaches for dissecting the complex quantitative traits in crop plants.

    Science.gov (United States)

    Kujur, Alice; Saxena, Maneesha S; Bajaj, Deepak; Laxmi; Parida, Swarup K

    2013-12-01

    The enormous population growth, climate change and global warming are now considered major threats to agriculture and world's food security. To improve the productivity and sustainability of agriculture, the development of highyielding and durable abiotic and biotic stress-tolerant cultivars and/climate resilient crops is essential. Henceforth, understanding the molecular mechanism and dissection of complex quantitative yield and stress tolerance traits is the prime objective in current agricultural biotechnology research. In recent years, tremendous progress has been made in plant genomics and molecular breeding research pertaining to conventional and next-generation whole genome, transcriptome and epigenome sequencing efforts, generation of huge genomic, transcriptomic and epigenomic resources and development of modern genomics-assisted breeding approaches in diverse crop genotypes with contrasting yield and abiotic stress tolerance traits. Unfortunately, the detailed molecular mechanism and gene regulatory networks controlling such complex quantitative traits is not yet well understood in crop plants. Therefore, we propose an integrated strategies involving available enormous and diverse traditional and modern -omics (structural, functional, comparative and epigenomics) approaches/resources and genomics-assisted breeding methods which agricultural biotechnologist can adopt/utilize to dissect and decode the molecular and gene regulatory networks involved in the complex quantitative yield and stress tolerance traits in crop plants. This would provide clues and much needed inputs for rapid selection of novel functionally relevant molecular tags regulating such complex traits to expedite traditional and modern marker-assisted genetic enhancement studies in target crop species for developing high-yielding stress-tolerant varieties.

  10. Precise plant breeding using new genome editing techniques: opportunities, safety and regulation in the EU.

    Science.gov (United States)

    Hartung, Frank; Schiemann, Joachim

    2014-06-01

    Several new plant breeding techniques (NPBTs) have been developed during the last decade, and make it possible to precisely perform genome modifications in plants. The major problem, other than technical aspects, is the vagueness of regulation concerning these new techniques. Since the definition of eight NPBTs by a European expert group in 2007, there has been an ongoing debate on whether the resulting plants and their products are covered by GMO legislation. Obviously, cover by GMO legislation would severely hamper the use of NPBT, because genetically modified plants must pass a costly and time-consuming GMO approval procedure in the EU. In this review, we compare some of the NPBTs defined by the EU expert group with classical breeding techniques and conventional transgenic plants. The list of NPBTs may be shortened (or extended) during the international discussion process initiated by the Organization for Economic Co-operation and Development. From the scientific point of view, it may be argued that plants developed by NPBTs are often indistinguishable from classically bred plants and are not expected to possess higher risks for health and the environment. In light of the debate on the future regulation of NPBTs and the accumulated evidence on the biosafety of genetically modified plants that have been commercialized and risk-assessed worldwide, it may be suggested that plants modified by crop genetic improvement technologies, including genetic modification, NPBTs or other future techniques, should be evaluated according to the new trait and the resulting end product rather than the technique used to create the new plant variety.

  11. Influence of outliers on accuracy estimation in genomic prediction in plant breeding.

    Science.gov (United States)

    Estaghvirou, Sidi Boubacar Ould; Ogutu, Joseph O; Piepho, Hans-Peter

    2014-10-01

    Outliers often pose problems in analyses of data in plant breeding, but their influence on the performance of methods for estimating predictive accuracy in genomic prediction studies has not yet been evaluated. Here, we evaluate the influence of outliers on the performance of methods for accuracy estimation in genomic prediction studies using simulation. We simulated 1000 datasets for each of 10 scenarios to evaluate the influence of outliers on the performance of seven methods for estimating accuracy. These scenarios are defined by the number of genotypes, marker effect variance, and magnitude of outliers. To mimic outliers, we added to one observation in each simulated dataset, in turn, 5-, 8-, and 10-times the error SD used to simulate small and large phenotypic datasets. The effect of outliers on accuracy estimation was evaluated by comparing deviations in the estimated and true accuracies for datasets with and without outliers. Outliers adversely influenced accuracy estimation, more so at small values of genetic variance or number of genotypes. A method for estimating heritability and predictive accuracy in plant breeding and another used to estimate accuracy in animal breeding were the most accurate and resistant to outliers across all scenarios and are therefore preferable for accuracy estimation in genomic prediction studies. The performances of the other five methods that use cross-validation were less consistent and varied widely across scenarios. The computing time for the methods increased as the size of outliers and sample size increased and the genetic variance decreased. Copyright © 2014 Ould Estaghvirou et al.

  12. Genetic variation in degradability of wheat straw and potential for improvement through plant breeding

    DEFF Research Database (Denmark)

    Jensen, Jacob Wagner; Magid, Jakob; Hansen-Møller, Jens

    2011-01-01

    contemporary gene pool. The cultivars were grown at two different locations to assess the potential for breeding for improved degradability. The straws exhibited much variation in degradability ranging from 258 g kg1 to 407 g kg1 of dry matter. The heritability for degradability was estimated to 29% indicating...... a reasonable potential for response to selection. Inclusion of height as a regression-term, indicated that only a minor part of genetic differences are directly related to plant height and that improvements in degradability may be achieved without unacceptable changes in straw length. Finally, a lack...... of correlation between degradability and grain yield indicated that straw degradability may be improved through breeding without serious negative effect on grain yield....

  13. Plants with genetically modified events combined by conventional breeding: an assessment of the need for additional regulatory data.

    Science.gov (United States)

    Pilacinski, W; Crawford, A; Downey, R; Harvey, B; Huber, S; Hunst, P; Lahman, L K; MacIntosh, S; Pohl, M; Rickard, C; Tagliani, L; Weber, N

    2011-01-01

    Crop varieties with multiple GM events combined by conventional breeding have become important in global agriculture. The regulatory requirements in different countries for such products vary considerably, placing an additional burden on regulatory agencies in countries where the submission of additional data is required and delaying the introduction of innovative products to meet agricultural needs. The process of conventional plant breeding has predictably provided safe food and feed products both historically and in the modern era of plant breeding. Thus, previously approved GM events that have been combined by conventional plant breeding and contain GM traits that are not likely to interact in a manner affecting safety should be considered to be as safe as their conventional counterparts. Such combined GM event crop varieties should require little, if any, additional regulatory data to meet regulatory requirements.

  14. Kazusa Marker DataBase: a database for genomics, genetics, and molecular breeding in plants.

    Science.gov (United States)

    Shirasawa, Kenta; Isobe, Sachiko; Tabata, Satoshi; Hirakawa, Hideki

    2014-09-01

    In order to provide useful genomic information for agronomical plants, we have established a database, the Kazusa Marker DataBase (http://marker.kazusa.or.jp). This database includes information on DNA markers, e.g., SSR and SNP markers, genetic linkage maps, and physical maps, that were developed at the Kazusa DNA Research Institute. Keyword searches for the markers, sequence data used for marker development, and experimental conditions are also available through this database. Currently, 10 plant species have been targeted: tomato (Solanum lycopersicum), pepper (Capsicum annuum), strawberry (Fragaria × ananassa), radish (Raphanus sativus), Lotus japonicus, soybean (Glycine max), peanut (Arachis hypogaea), red clover (Trifolium pratense), white clover (Trifolium repens), and eucalyptus (Eucalyptus camaldulensis). In addition, the number of plant species registered in this database will be increased as our research progresses. The Kazusa Marker DataBase will be a useful tool for both basic and applied sciences, such as genomics, genetics, and molecular breeding in crops.

  15. [The application of genome editing in identification of plant gene function and crop breeding].

    Science.gov (United States)

    Xiangchun, Zhou; Yongzhong, Xing

    2016-03-01

    Plant genome can be modified via current biotechnology with high specificity and excellent efficiency. Zinc finger nucleases (ZFN), transcription activator-like effector nucleases (TALEN) and clustered regularly interspaced short palindromic repeats (CRISPR)/CRISPR-associated 9 (Cas9) system are the key engineered nucleases used in the genome editing. Genome editing techniques enable gene targeted mutagenesis, gene knock-out, gene insertion or replacement at the target sites during the endogenous DNA repair process, including non-homologous end joining (NHEJ) and homologous recombination (HR), triggered by the induction of DNA double-strand break (DSB). Genome editing has been successfully applied in the genome modification of diverse plant species, such as Arabidopsis thaliana, Oryza sativa, and Nicotiana tabacum. In this review, we summarize the application of genome editing in identification of plant gene function and crop breeding. Moreover, we also discuss the improving points of genome editing in crop precision genetic improvement for further study.

  16. Use of physical/chemical mutagens in plant breeding program in Vietnam

    Energy Technology Data Exchange (ETDEWEB)

    Tran Duy Quy; Nguyen Huu Dong; Bui Huy Thuy; Le Van Nha; Nguyen Van Bich [Agricultural Genetics Institute, Hanoi (Viet Nam)

    2001-03-01

    Among more than 1870 new plant varieties formed by mutation breeding in the world, 44 varieties of different plants were formed by Vietnamese scientists. Research on induced mutation in Vietnam started in 1966, was promoted in Agricultural Institute, Cuu Long Delta Rice Research Institute, Institute of Food Crop Research, and Agriculture Universities, and has produced varieties of rice, maize, soybean, peanut, tomato, jujuba, green bean etc using physical and chemical mutagens: Irradiation with gamma rays or neutrons, and use of such chemicals as dimethylsulfate (DMS), diethylsulfate (DES), ethyleneimine (EI), N-nitrosomethylurea (NUM), N-nitrosoethylurea (NEU), and sodium azide (NaN{sub 3}). In the present report, the results of cytological and genetic effects in M1 plants, the frequency and spectrum of chlorophyll and morphological mutants, the mutants obtained and the genetic nature of the next generation are described, particularly for the case of rice. Radiation dose and dose rate used as mutagens are also reported. (S. Ohno)

  17. Inhibition of RNA polymerase II allows controlled mobilisation of retrotransposons for plant breeding.

    Science.gov (United States)

    Thieme, Michael; Lanciano, Sophie; Balzergue, Sandrine; Daccord, Nicolas; Mirouze, Marie; Bucher, Etienne

    2017-07-07

    Retrotransposons play a central role in plant evolution and could be a powerful endogenous source of genetic and epigenetic variability for crop breeding. To ensure genome integrity several silencing mechanisms have evolved to repress retrotransposon mobility. Even though retrotransposons fully depend on transcriptional activity of the host RNA polymerase II (Pol II) for their mobility, it was so far unclear whether Pol II is directly involved in repressing their activity. Here we show that plants defective in Pol II activity lose DNA methylation at repeat sequences and produce more extrachromosomal retrotransposon DNA upon stress in Arabidopsis and rice. We demonstrate that combined inhibition of both DNA methylation and Pol II activity leads to a strong stress-dependent mobilization of the heat responsive ONSEN retrotransposon in Arabidopsis seedlings. The progenies of these treated plants contain up to 75 new ONSEN insertions in their genome which are stably inherited over three generations of selfing. Repeated application of heat stress in progeny plants containing increased numbers of ONSEN copies does not result in increased activation of this transposon compared to control lines. Progenies with additional ONSEN copies show a broad panel of environment-dependent phenotypic diversity. We demonstrate that Pol II acts at the root of transposon silencing. This is important because it suggests that Pol II can regulate the speed of plant evolution by fine-tuning the amplitude of transposon mobility. Our findings show that it is now possible to study induced transposon bursts in plants and unlock their use to induce epigenetic and genetic diversity for crop breeding.

  18. Prediction of Genetic Values of Quantitative Traits in Plant Breeding Using Pedigree and Molecular Markers

    Science.gov (United States)

    Crossa, José; Campos, Gustavo de los; Pérez, Paulino; Gianola, Daniel; Burgueño, Juan; Araus, José Luis; Makumbi, Dan; Singh, Ravi P.; Dreisigacker, Susanne; Yan, Jianbing; Arief, Vivi; Banziger, Marianne; Braun, Hans-Joachim

    2010-01-01

    The availability of dense molecular markers has made possible the use of genomic selection (GS) for plant breeding. However, the evaluation of models for GS in real plant populations is very limited. This article evaluates the performance of parametric and semiparametric models for GS using wheat (Triticum aestivum L.) and maize (Zea mays) data in which different traits were measured in several environmental conditions. The findings, based on extensive cross-validations, indicate that models including marker information had higher predictive ability than pedigree-based models. In the wheat data set, and relative to a pedigree model, gains in predictive ability due to inclusion of markers ranged from 7.7 to 35.7%. Correlation between observed and predictive values in the maize data set achieved values up to 0.79. Estimates of marker effects were different across environmental conditions, indicating that genotype × environment interaction is an important component of genetic variability. These results indicate that GS in plant breeding can be an effective strategy for selecting among lines whose phenotypes have yet to be observed. PMID:20813882

  19. Integrated genomics and molecular breeding approaches for dissecting the complex quantitative traits in crop plants

    Indian Academy of Sciences (India)

    Alice Kujur; Maneesha S Saxena; Deepak Bajaj; Laxmi; Swarup K Parida

    2013-12-01

    The enormous population growth, climate change and global warming are now considered major threats to agriculture and world’s food security. To improve the productivity and sustainability of agriculture, the development of high-yielding and durable abiotic and biotic stress-tolerant cultivars and/climate resilient crops is essential. Henceforth, understanding the molecular mechanism and dissection of complex quantitative yield and stress tolerance traits is the prime objective in current agricultural biotechnology research. In recent years, tremendous progress has been made in plant genomics and molecular breeding research pertaining to conventional and next-generation whole genome, transcriptome and epigenome sequencing efforts, generation of huge genomic, transcriptomic and epigenomic resources and development of modern genomics-assisted breeding approaches in diverse crop genotypes with contrasting yield and abiotic stress tolerance traits. Unfortunately, the detailed molecular mechanism and gene regulatory networks controlling such complex quantitative traits is not yet well understood in crop plants. Therefore, we propose an integrated strategies involving available enormous and diverse traditional and modern –omics (structural, functional, comparative and epigenomics) approaches/resources and genomics-assisted breeding methods which agricultural biotechnologist can adopt/utilize to dissect and decode the molecular and gene regulatory networks involved in the complex quantitative yield and stress tolerance traits in crop plants. This would provide clues and much needed inputs for rapid selection of novel functionally relevant molecular tags regulating such complex traits to expedite traditional and modern marker-assisted genetic enhancement studies in target crop species for developing high-yielding stress-tolerant varieties.

  20. Neutronic performance issues of the breeding blanket options for the European DEMO fusion power plant

    Energy Technology Data Exchange (ETDEWEB)

    Fischer, U., E-mail: ulrich.fischer@kit.edu [Karlsruhe Institute of Technology (KIT), Hermann-von-Helmholtz-Platz 1, 76344 Eggenstein-Leopoldshafen (Germany); Bachmann, C. [EUROfusion—Programme Management Unit, Boltzmannstr. 2, 85748 Garching (Germany); Jaboulay, J.-C. [CEA-Saclay, DEN, DM2S, SERMA, LPEC, 91191 Gif-sur-Yvette (France); Moro, F. [ENEA, Dipartimento Fusione e tecnologie per la Sicurezza Nucleare, Via E. Fermi 45, 00044 Frascati, Rome (Italy); Palermo, I. [Centro de Investigaciones Energéticas, Medioambientales y Tecnológicas (CIEMAT), Madrid (Spain); Pereslavtsev, P. [Karlsruhe Institute of Technology (KIT), Hermann-von-Helmholtz-Platz 1, 76344 Eggenstein-Leopoldshafen (Germany); Villari, R. [ENEA, Dipartimento Fusione e tecnologie per la Sicurezza Nucleare, Via E. Fermi 45, 00044 Frascati, Rome (Italy)

    2016-11-01

    Highlights: • Breeder blanket concepts for DEMO—design features. • Neutronic characteristics of breeder blankets. • Evaluation of Tritium breeding potential. • Evaluation of shielding performance. - Abstract: This paper presents nuclear performance issues of the HCPB, HCLL, DCLL and WCLL breeder blankets, which are under development within the PPPT (Power Plant Physics and Technology) programme of EUROfusion, with the objective to assess the potential and suitability of the blankets for the application to DEMO. The assessment is based on the initial design versions of the blankets developed in 2014. The Tritium breeding potential is considered sufficient for all breeder blankets although the initial design versions of the HCPB, HCLL and DCLL blankets were shown to require further design improvements. Suitable measures have been proposed and proven to be sufficient to achieve the required Tritium Breeding Ratio (TBR) ≥ 1.10. The shielding performance was shown to be sufficient to protect the super-conducting toroidal field coil provided that efficient shielding material mixtures including WC or borated water are utilized. The WCLL blanket does not require the use of such shielding materials due to a very compact blanket support structure/manifold configuration which yet requires design verification. The vacuum vessel can be safely operated over the full anticipated DEMO lifetime of 6 full power years for all blanket concepts considered.

  1. 谷子理想株型育种研究初报%A Preliminary Study on Breeding of Ideal Plant in Millet

    Institute of Scientific and Technical Information of China (English)

    闫宏山

    2009-01-01

    To further increase millet yield, the ideal plant in millet has become the goal of high yield breeding for millet. Taking crossbreeding or dynamic breeding technique as dominant and technologies such as modern selection or system selection as subsidiary, progenies with ideal plant are selected by using new germplasms such as Lilvgu and Lizigu with the significant difference in plant type to other cultivars as parents. The genetic characteristics of new germplasms in breeding are also emphatically analyzed to summarize the breeding experience of ideal plant, which has been proved that the combination of ideal plant and heterosis utilization is one of the important ways to raise millet yield breakthrough.

  2. The fate of peasant-friendly plant breeding in Nazi Germany.

    Science.gov (United States)

    Harwood, Jonathan

    2010-01-01

    The peasantry played a central role in National Socialist ideology, as both a source of racial strength and a foundation of the economy. In this paper I explore the extent to which the regime's policies actually favored peasant farming. The first section looks at the overall character of agricultural policy and demonstrates that although peasant farmers were targeted for special assistance from 1933 until 1936, they were neglected thereafter as the economy geared up for war. In the second section I focus upon a particular set of policies—-the regime's attempts to promote the use of high-quality seed—-and show that while farmers as a whole probably gained from these measures, peasants appear not to have benefited differentially. In the third section I examine agricultural officials' attempts to establish a "division of labor" between public-sector plant breeding institutions and commercial breeders. I demonstrate that although the former had been successfully developing new varieties specifically designed for peasant farmers since the turn of the century, this work was henceforth to be curtailed so as not to "compete" with the private sector. In the conclusion I argue that neither the regime's policies on plant breeding nor the highly centralized character of agricultural policy-making can be regarded as specifically fascist.

  3. Ecogeography and utility to plant breeding of the crop wild relatives of sunflower (Helianthus annuus L.).

    Science.gov (United States)

    Kantar, Michael B; Sosa, Chrystian C; Khoury, Colin K; Castañeda-Álvarez, Nora P; Achicanoy, Harold A; Bernau, Vivian; Kane, Nolan C; Marek, Laura; Seiler, Gerald; Rieseberg, Loren H

    2015-01-01

    Crop wild relatives (CWR) are a rich source of genetic diversity for crop improvement. Combining ecogeographic and phylogenetic techniques can inform both conservation and breeding. Geographic occurrence, bioclimatic, and biophysical data were used to predict species distributions, range overlap and niche occupancy in 36 taxa closely related to sunflower (Helianthus annuus L.). Taxa lacking comprehensive ex situ conservation were identified. The predicted distributions for 36 Helianthus taxa identified substantial range overlap, range asymmetry and niche conservatism. Specific taxa (e.g., Helianthus deblis Nutt., Helianthus anomalus Blake, and Helianthus divaricatus L.) were identified as targets for traits of interest, particularly for abiotic stress tolerance, and adaptation to extreme soil properties. The combination of techniques demonstrates the potential for publicly available ecogeographic and phylogenetic data to facilitate the identification of possible sources of abiotic stress traits for plant breeding programs. Much of the primary genepool (wild H. annuus) occurs in extreme environments indicating that introgression of targeted traits may be relatively straightforward. Sister taxa in Helianthus have greater range overlap than more distantly related taxa within the genus. This adds to a growing body of literature suggesting that in plants (unlike some animal groups), geographic isolation may not be necessary for speciation.

  4. Ecogeography and utility to plant breeding of the crop wild relatives of sunflower (Helianthus annuus L.

    Directory of Open Access Journals (Sweden)

    Michael Benjamin Kantar

    2015-10-01

    Full Text Available Crop wild relatives (CWR are a rich source of genetic diversity for crop improvement. Combining ecogeographic and phylogenetic techniques can inform both conservation and breeding. Geographic occurrence, bioclimatic, and biophysical data were used to predict species distributions, range overlap and niche occupancy in 36 taxa closely related to sunflower (Helianthus annuus L.. Taxa lacking comprehensive ex situ conservation were identified. The predicted distributions for 36 Helianthus taxa identified substantial range overlap and asymmetry and niche conservatism. Specific taxa (e.g., Helianthus deblis Nutt., Helianthus anomalus Blake, and Helianthus divaricatus L. were identified as targets for traits of interest, particularly for abiotic stress tolerance and adaptation to extreme soil properties. The combination of techniques demonstrates the potential for publicly available ecogeographic and phylogenetic data to facilitate the identification of possible sources of abiotic stress traits for plant breeding programs. Much of the primary genepool (wild H. annuus occurs in extreme environments indicating that introgression of targeted traits may be relatively straightforward. Sister taxa in Helianthus have greater range overlap than more distantly related taxa within the genus. This adds to a growing body of literature suggesting that in plants (unlike some animal groups, geographic isolation may not be necessary for speciation.

  5. Elevating optimal human nutrition to a central goal of plant breeding and production of plant-based foods.

    Science.gov (United States)

    Sands, David C; Morris, Cindy E; Dratz, Edward A; Pilgeram, Alice

    2009-11-01

    High-yielding cereals and other staples have produced adequate calories to ward off starvation for much of the world over several decades. However, deficiencies in certain amino acids, minerals, vitamins and fatty acids in staple crops, and animal diets derived from them, have aggravated the problem of malnutrition and the increasing incidence of certain chronic diseases in nominally well-nourished people (the so-called diseases of civilization). Enhanced global nutrition has great potential to reduce acute and chronic disease, the need for health care, the cost of health care, and to increase educational attainment, economic productivity and the quality of life. However, nutrition is currently not an important driver of most plant breeding efforts, and there are only a few well-known efforts to breed crops that are adapted to the needs of optimal human nutrition. Technological tools are available to greatly enhance the nutritional value of our staple crops. However, enhanced nutrition in major crops might only be achieved if nutritional traits are introduced in tandem with important agronomic yield drivers, such as resistance to emerging pests or diseases, to drought and salinity, to herbicides, parasitic plants, frost or heat. In this way we might circumvent a natural tendency for high yield and low production cost to effectively select against the best human nutrition. Here we discuss the need and means for agriculture, food processing, food transport, sociology, nutrition and medicine to be integrated into new approaches to food production with optimal human nutrition as a principle goal.

  6. Using modern plant breeding to improve the nutritional and technological qualities of oil crops

    Directory of Open Access Journals (Sweden)

    Murphy Denis J.

    2014-11-01

    Full Text Available The last few decades have seen huge advances in our understanding of plant biology and in the development of new technologies for the manipulation of crop plants. The application of relatively straightforward breeding and selection methods made possible the “Green Revolution” of the 1960s and 1970s that effectively doubled or trebled cereal production in much of the world and averted mass famine in Asia. During the 2000s, much attention has been focused on genomic approaches to plant breeding with the deployment of a new generation of technologies, such as marker-assisted selection, next-generation sequencing, transgenesis (genetic engineering or GM and automatic mutagenesis/selection (TILLING, TargetIng Local Lesions IN Genomes. These methods are now being applied to a wide range of crops and have particularly good potential for oil crop improvement in terms of both overall food and non-food yield and nutritional and technical quality of the oils. Key targets include increasing overall oil yield and stability on a per seed or per fruit basis and very high oleic acid content in seed and fruit oils for both premium edible and oleochemical applications. Other more specialised targets include oils enriched in nutritionally desirable “fish oil”-like fatty acids, especially very long chain !-3 acids such as eicosapentaenoic acid (EPA and docosahexaenoic acid (DHA, or increased levels of lipidic vitamins such as carotenoids, tocopherols and tocotrienes. Progress in producing such oils in commercial crops has been good in recent years with several varieties being released or at advanced stages of development.

  7. Controllable Alternating Magnetic Technology Research for Inducing Plants Breeding on Ground

    Directory of Open Access Journals (Sweden)

    Guo-wen HU

    2013-04-01

    Full Text Available Controllable alternating induction magnetic field generation technology which induces plant seeds to breed on floor space has been developed. The incentive ferrite induction coil is used in the device to produce induced magnetic field. The common AC-DC-AC topology was adopted for the variable frequency power supply, realizing the VF. AC-DC-AC AC power inverter circuit adopts SPWM inverter frequency modulation and voltage regulation mode, realizing the effect of sinusoidal variable. In order to improve the conversion efficiency of the system electrical energy to magnetic energy, the RLC series resonant circuit is chosen in the circuit of output magnetic field. The induction magnetic field in the air gap is the work area for seeds experiment. Its adjustable frequency range: 20~200Hz, adjustable field range: 0~500Gs. The experimental study of rice seeds shows that different magnetic environment has a significant impact on the biological characteristics of rice seeds.

  8. New Insights on Plant Salt Tolerance Mechanisms and Their Potential Use for Breeding.

    Science.gov (United States)

    Hanin, Moez; Ebel, Chantal; Ngom, Mariama; Laplaze, Laurent; Masmoudi, Khaled

    2016-01-01

    Soil salinization is a major threat to agriculture in arid and semi-arid regions, where water scarcity and inadequate drainage of irrigated lands severely reduce crop yield. Salt accumulation inhibits plant growth and reduces the ability to uptake water and nutrients, leading to osmotic or water-deficit stress. Salt is also causing injury of the young photosynthetic leaves and acceleration of their senescence, as the Na(+) cation is toxic when accumulating in cell cytosol resulting in ionic imbalance and toxicity of transpiring leaves. To cope with salt stress, plants have evolved mainly two types of tolerance mechanisms based on either limiting the entry of salt by the roots, or controlling its concentration and distribution. Understanding the overall control of Na(+) accumulation and functional studies of genes involved in transport processes, will provide a new opportunity to improve the salinity tolerance of plants relevant to food security in arid regions. A better understanding of these tolerance mechanisms can be used to breed crops with improved yield performance under salinity stress. Moreover, associations of cultures with nitrogen-fixing bacteria and arbuscular mycorrhizal fungi could serve as an alternative and sustainable strategy to increase crop yields in salt-affected fields.

  9. New Insights on plant salt tolerance mechanisms and their potential use for breeding

    Directory of Open Access Journals (Sweden)

    Moez HANIN

    2016-11-01

    Full Text Available Soil salinization is a major threat to agriculture in arid and semi-arid regions, where water scarcity and inadequate drainage of irrigated lands severely reduce crop yield. Salt accumulation inhibits plant growth and reduces the ability to uptake water and nutrients, leading to osmotic or water-deficit stress. Salt is also causing injury of the young photosynthetic leaves and acceleration of their senescence, as the Na+ cation is toxic when accumulating in cell cytosol resulting in ionic imbalance and toxicity of transpiring leaves. To cope with salt stress, plants have evolved mainly two types of tolerance mechanisms based on either limiting the entry of salt by the roots, or controlling its concentration and distribution. Understanding the overall control of Na+ accumulation and functional studies of genes involved in transport processes, will provide a new opportunity to improve the salinity tolerance of plants relevant to food security in arid regions. A better understanding of these tolerance mechanisms can be used to breed crops with improved yield performance under salinity stress. Moreover, associations of cultures with nitrogen-fixing bactéria and arbuscular mycorrhizal fungi could serve as an alternative and sustainable strategy to increase crop yields in salt affected fields.

  10. Plant Glandular Trichomes as Targets for Breeding or Engineering of Resistance to Herbivores

    Directory of Open Access Journals (Sweden)

    Merijn R. Kant

    2012-12-01

    Full Text Available Glandular trichomes are specialized hairs found on the surface of about 30% of all vascular plants and are responsible for a significant portion of a plant’s secondary chemistry. Glandular trichomes are an important source of essential oils, i.e., natural fragrances or products that can be used by the pharmaceutical industry, although many of these substances have evolved to provide the plant with protection against herbivores and pathogens. The storage compartment of glandular trichomes usually is located on the tip of the hair and is part of the glandular cell, or cells, which are metabolically active. Trichomes and their exudates can be harvested relatively easily, and this has permitted a detailed study of their metabolites, as well as the genes and proteins responsible for them. This knowledge now assists classical breeding programs, as well as targeted genetic engineering, aimed to optimize trichome density and physiology to facilitate customization of essential oil production or to tune biocide activity to enhance crop protection. We will provide an overview of the metabolic diversity found within plant glandular trichomes, with the emphasis on those of the Solanaceae, and of the tools available to manipulate their activities for enhancing the plant’s resistance to pests.

  11. Transgenerational response to stress in plants and its application for breeding.

    Science.gov (United States)

    Bilichak, Andriy; Kovalchuk, Igor

    2016-03-01

    A growing number of reports indicate that plants possess the ability to maintain a memory of stress exposure throughout their ontogenesis and even transmit it faithfully to the following generation. Some of the features of transgenerational memory include elevated genome instability, a higher tolerance to stress experienced by parents, and a cross-tolerance. Although the underlying molecular mechanisms of this phenomenon are not clear, a likely contributing factor is the absence of full-scale reprogramming of the epigenetic landscape during gametogenesis; therefore, epigenetic marks can occasionally escape the reprogramming process and can be passed on to the progeny. To date, it is not entirely clear which part of the epigenetic landscape is more likely to escape the reprogramming events, and whether such a process is random or directed and sequence specific. The identification of specific epigenetic marks associated with specific stressors would allow generation of stress-tolerant plants through the recently discovered techniques for precision epigenome engineering. The engineered DNA-binding domains (e.g. ZF, TALE, and dCas9) fused to particular chromatin modifiers would make it possible to target epigenetic modifications to the selected loci, probably allowing stress tolerance to be achieved in the progeny. This approach, termed epigenetic breeding, along with other methods has great potential to be used for both the assessment of the propagation of epigenetic marks across generations and trait improvement in plants. In this communication, we provide a short overview of recent reports demonstrating a transgenerational response to stress in plants, and discuss the underlying potential molecular mechanisms of this phenomenon and its use for plant biotechnology applications.

  12. Public research in plant breeding and intellectual property rights: a new call for new institutional policies

    NARCIS (Netherlands)

    Tripp, R.; Eaton, D.J.F.; Louwaars, N.P.

    2006-01-01

    This paper addresses the issue of using intellectual property rights (IPRs) in public sector breeding, and the potential impact on breeding strategies and on the costs and benefits. The paper is based on a study on the impact of IPRs in the breeding industry in developing countries. There are three

  13. Public research in plant breeding and intellectual property rights: a new call for new institutional policies

    NARCIS (Netherlands)

    Tripp, R.; Eaton, D.J.F.; Louwaars, N.P.

    2006-01-01

    This paper addresses the issue of using intellectual property rights (IPRs) in public sector breeding, and the potential impact on breeding strategies and on the costs and benefits. The paper is based on a study on the impact of IPRs in the breeding industry in developing countries. There are three

  14. Between and beyond additivity and non-additivity; the statistical modelling of genotype by environment interaction in plant breeding.

    NARCIS (Netherlands)

    Eeuwijk, van F.A.

    1996-01-01

    In plant breeding it is a common observation to see genotypes react differently to environmental changes. This phenomenon is called genotype by environment interaction. Many statistical approaches for analysing genotype by environment interaction rely heavily on the analysis of variance model. Genot

  15. Between and beyond additivity and non-additivity : the statistical modelling of genotype by environment interaction in plant breeding

    NARCIS (Netherlands)

    Eeuwijk, van F.A.

    1996-01-01

    In plant breeding it is a common observation to see genotypes react differently to environmental changes. This phenomenon is called genotype by environment interaction. Many statistical approaches for analysing genotype by environment interaction rely heavily on the analysis of variance model.

  16. Analysing patent landscapes in plant biotechnology and new plant breeding techniques.

    Science.gov (United States)

    Parisi, Claudia; Rodríguez-Cerezo, Emilio; Thangaraj, Harry

    2013-02-01

    This article aims to inform the reader of the importance of searching patent landscapes in plant biotechnology and the use of basic tools to perform a patent search. The recommendations for a patent search strategy are illustrated with the specific example of zinc finger nuclease technology for genetic engineering in plants. Within this scope, we provide a general introduction to searching using two online and free-access patent databases esp@cenet and PatentScope. The essential features of the two databases, and their functionality is described, together with short descriptions to enable the reader to understand patents, searching, their content, patent families, and their territorial scope. We mostly stress the value of patent searching for mining scientific, rather than legal information. Search methods through the use of keywords and patent codes are elucidated together with suggestions about how to search with or combine codes with keywords and we also comment on limitations of each method. We stress the importance of patent literature to complement more mainstream scientific literature, and the relative complexities and difficulties in searching patents compared to the latter. A parallel online resource where we describe detailed search exercises is available through reference for those intending further exploration. In essence this is aimed at a novice patent searcher who may want to examine accessory patent literature to complement knowledge gained from mainstream journal resources.

  17. Molecular Breeding to Create Optimized Crops: From Genetic Manipulation to Potential Applications in Plant Factories.

    Science.gov (United States)

    Hiwasa-Tanase, Kyoko; Ezura, Hiroshi

    2016-01-01

    Crop cultivation in controlled environment plant factories offers great potential to stabilize the yield and quality of agricultural products. However, many crops are currently unsuited to these environments, particularly closed cultivation systems, due to space limitations, low light intensity, high implementation costs, and high energy requirements. A major barrier to closed system cultivation is the high running cost, which necessitates the use of high-margin crops for economic viability. High-value crops include those with enhanced nutritional value or containing additional functional components for pharmaceutical production or with the aim of providing health benefits. In addition, it is important to develop cultivars equipped with growth parameters that are suitable for closed cultivation. Small plant size is of particular importance due to the limited cultivation space. Other advantageous traits are short production cycle, the ability to grow under low light, and high nutriculture availability. Cost-effectiveness is improved from the use of cultivars that are specifically optimized for closed system cultivation. This review describes the features of closed cultivation systems and the potential application of molecular breeding to create crops that are optimized for cost-effectiveness and productivity in closed cultivation systems.

  18. Molecular breeding to create optimized crops: from genetic manipulation to potential applications in plant factories

    Directory of Open Access Journals (Sweden)

    Kyoko eHiwasa-Tanase

    2016-04-01

    Full Text Available Crop cultivation in controlled environment plant factories offers great potential to stabilize the yield and quality of agricultural products. However, many crops are currently unsuited to these environments, particularly closed cultivation systems, due to space limitations, low light intensity, high implementation costs, and high energy requirements. A major barrier to closed system cultivation is the high running cost, which necessitates the use of high-margin crops for economic viability. High-value crops include those with enhanced nutritional value or containing additional functional components for pharmaceutical production or with the aim of providing health benefits. In addition, it is important to develop cultivars equipped with growth parameters that are suitable for closed cultivation. Small plant size is of particular importance due to the limited cultivation space. Other advantageous traits are short production cycle, the ability to grow under low light, and high nutriculture availability. Cost-effectiveness is improved from the use of cultivars that are specifically optimized for closed system cultivation. This review describes the features of closed cultivation systems and the potential application of molecular breeding to create crops that are optimized for cost-effectiveness and productivity in closed cultivation systems.

  19. Mitochondrial genes reveal cryptic diversity in plant-breeding frogs from Madagascar (Anura, Mantellidae, Guibemantis).

    Science.gov (United States)

    Lehtinen, Richard M; Nussbaum, Ronald A; Richards, Christina M; Cannatella, David C; Vences, Miguel

    2007-09-01

    One group of mantellid frogs from Madagascar (subgenus Pandanusicola of Guibemantis) includes species that complete larval development in the water-filled leaf axils of rainforest plants. This group consists of six described species: G. albolineatus, G. bicalcaratus, G. flavobrunneus, G. liber, G. pulcher, and G. punctatus. We sequenced the 12S and 16S mitochondrial rRNA genes ( approximately 1.8 kb) from multiple specimens (35 total) of all six species to assess phylogenetic relationships within this group. All reconstructions strongly supported G. liber as part of the Pandanusicola clade, even though this species does not breed in plant leaf axils. This result confirms a striking reversal of reproductive specialization. However, all analyses also indicated that specimens assigned to G. liber include genetically distinct allopatric forms that do not form a monophyletic group. Most other taxa that were adequately sampled (G. bicalcaratus, G. flavobrunneus, and G. pulcher) likewise consist of several genetically distinct lineages that do not form monophyletic groups. These results suggest that many of the recognized species in this group are complexes of cryptic species.

  20. Plant prebiotics and human health: Biotechnology to breed prebiotic-rich nutritious food crops

    Directory of Open Access Journals (Sweden)

    Sangam Dwivedi

    2014-09-01

    Full Text Available Microbiota in the gut play essential roles in human health. Prebiotics are non-digestible complex carbohydrates that are fermented in the colon, yielding energy and short chain fatty acids, and selectively promote the growth of Bifidobacteria and Lactobacillae in the gastro-intestinal tract. Fructans and inulin are the best-characterized plant prebiotics. Many vegetable, root and tuber crops as well as some fruit crops are the best-known sources of prebiotic carbohydrates, while the prebiotic-rich grain crops include barley, chickpea, lentil, lupin, and wheat. Some prebiotic-rich crop germplasm have been reported in barley, chickpea, lentil, wheat, yacon, and Jerusalem artichoke. A few major quantitative trait loci and gene-based markers associated with high fructan are known in wheat. More targeted search in genebanks using reduced subsets (representing diversity in germplasm is needed to identify accessions with prebiotic carbohydrates. Transgenic maize, potato and sugarcane with high fructan, with no adverse effects on plant development, have been bred, which suggests that it is feasible to introduce fructan biosynthesis pathways in crops to produce health-imparting prebiotics. Developing prebiotic-rich and super nutritious crops will alleviate the widespread malnutrition and promote human health. A paradigm shift in breeding program is needed to achieve this goal and to ensure that newly-bred crop cultivars are nutritious, safe and health promoting.

  1. Genetic divergence and its implication in breeding of desired plant type in coriander -Coriandrum sativum L.-

    Directory of Open Access Journals (Sweden)

    Singh S.P.

    2005-01-01

    Full Text Available Seventy germplasm lines of coriander (Coriandrum sativum L. of diverse eco-geographical origin were undertaken in present investigation to determine the genetic divergence following multivariate and canonical analysis for seed yield and its 9 component traits. The 70 genotypes were grouped into 9 clusters depending upon the genetic architecture of genotypes and characters uniformity and confirmed by canonical analysis. Seventy percent of total genotypes (49/70 were grouped in 4 clusters (V, VI, VIII and IX, while apparent diversity was noticed for 30 percent genotypes (21/70 that diverged into 5 clusters (I, II, III, FV, and VII. The maximum inter cluster distance was between I and IV (96.20 followed by III and IV (91.13 and I and VII (87.15. The cluster VI was very unique having genotypes of high mean values for most of the component traits. The cluster VII had highest seeds/umbel (35.3 ± 2.24, and leaves/plant (12.93 ± 0.55, earliest flowering (65.05 ± 1.30 and moderately high mean values for other characters. Considering high mean and inter cluster distance breeding plan has been discussed to select desirable plant types.

  2. Proceedings of the 8th workshop on plant mutation breeding. Effective use of physical/chemical mutagens

    Energy Technology Data Exchange (ETDEWEB)

    Kume, Tamikazu; Watanabe, Kazuo; Tano, Shigemitsu (eds.) [Japan Atomic Energy Research Inst., Takasaki, Gunma (Japan). Takasaki Radiation Chemistry Research Establishment

    2001-03-01

    The Workshop on Plant Mutation Breeding of FNCA (Forum for Nuclear Cooperation in Asia), was held on 9-13 October 2000 in Hanoi, Vietnam. The Workshop was co-sponsored by the Science and Technology Agency (STA), the Ministry of Science, Technology and Environment (MOSTE of Vietnam) and the Ministry of Agriculture and Rural Development (MARD of Vietnam) in cooperation with the Ministry of Agriculture, Forestry and Fisheries (MAFF), National Institute of Agrobiological Resources (NIAR of Vietnam), the Japan Atomic Industrial Forum (JAIF) and Japan Atomic Energy Research Institute (JAERI). Two Scientists, a Project Leader and an expert on methodology for plant/crop mutation breeding, participated from each of the member countries, i.e. China, Indonesia, Malaysia, the Philippines, Thailand, Vietnam and Japan. Also attending the Workshop were, one participant from Korea, seven participants from both Japan and Vietnam. The number of the participants in the Workshop totalled about sixty people including guests and observers. Sixteen papers including eight invited papers on the current status of methodology for plant/crop mutation breeding in the participating countries were presented. Discussions were focused on the subject concerning 'Effective Use of Physical/Chemical Mutagens', as well as a detailed report on the current status of research in each participating country. In addition, the topics of developing a mutant breeding database, an information exchange for plant/crop mutation breeding, and more tightly bound international co-operative research in the near future were also high on the agenda. This proceeding compiles the invited and contributed papers that were submitted from the speakers. (author)

  3. Expressing the public value of plant genetic resources by organising novel relationships: The contribution of selected participaory plant breeding and market-based arrangements.

    NARCIS (Netherlands)

    Li, Jingsong; Lammerts Van Bueren, E.; Leeuwis, C.; Jiggins, J.

    2014-01-01

    After more than a decade of successful collaboration in participatory plant breeding (PPB) between farmers and maize breeders in southwest China, and release of new improved varieties and hybrids, it was realised that their conservation objectives could not also be secured unless farmers had

  4. Floral biology and reproductive mechanisms of Mussambê (Cleome spinosa Jacq aiming at the plant breeding

    Directory of Open Access Journals (Sweden)

    Cláudio Lúcio Fernandes Amaral

    2007-12-01

    Full Text Available Some plants from Cleome genus in Capparaceae family are used as medicinal and ornamental plants. The aim of this work was to study the fl oral biology and the reproductive mechanisms of C. spinosa to the plant breeding. Anthesis occurred between 17:30 to 18:30. The anthesis process is intimately related to climatic conditions. The main flower visitors were bees (Apis, Bombus, butterflies and bats (Glossophaga. Cleome spinosa presents mating system with predominance of outcrossing over the self-crossing, what it can evidences the wide reproductive flexibility of this species and emphasize the genetic variability, which is essential for evolution.

  5. Mini core germplasm collections for infusing genetic diversity in plant breeding programs

    Directory of Open Access Journals (Sweden)

    Hari D Upadhyaya*, Devvart Yadav, Naresh Dronavalli, CLL Gowda, and Sube Singh

    2010-07-01

    Full Text Available Plant genetic resources are essential components to meet future food security needs of world. Crop germplasm diversitycontributes to developing improved crop cultivars aimed at increasing crop productivity. The large size of germplasmcollections, coupled with unavailability of detailed data and information, has resulted in low use (<1% of germplasmleading to a narrow genetic base in many crops. The miniaturization of crop collections with almost full representation ofgenetic diversity in the form of mini core (~1% of the entire collection approach is an effective methodology to enrichand enhance crop improvement programs. The concept and process of developing mini core at The International CropsResearch Institute for the Semi-Arid Tropics (ICRISAT has been recognized worldwide as an “International PublicGood” (IPG. The mini core provides a means for accessing the larger collections for further exploration and also helps inproper assessment of genetic diversity and population structure and for association mapping and targeted gene mining.Use of mini core approach will lead to greater utilization of diverse germplasm for developing broad-based cultivars,especially in the context of climate change. Many national programs have shown immense interest in evaluating minicore as reflected by the supply of 114 sets of mini core of chickpea, groundnut, pigeonpea, sorghum, pearl millet, foxtailmillet and finger millet to researchers in 14 countries. Scientists have been able to identify new and diverse sources ofvariation for morpho-agronomic, quality, biotic, and abiotic stress resistance traits in various crops. The molecularcharacterization of the mini core will further enhance its use in plant breeding programs.

  6. Bringing the voice of consumers into plant breeding with Bayesian modelling

    NARCIS (Netherlands)

    Tesfaye, L.M.; Bink, M.C.A.M.; Lans, van der I.A.; Gremmen, B.; Trijp, van H.C.M.

    2013-01-01

    Improving flavour quality traits in fruit breeding calls for innovative consumer-oriented product development. This paper explores the potential of marker-assisted breeding from genomics and consumer-based quality-improvement models from marketing, and exploits the progresses at both sides as techno

  7. Plant Sexual Systems and a Review of the Breeding System Studies in the Caatinga, a Brazilian Tropical Dry Forest

    OpenAIRE

    Machado, Isabel Cristina; Lopes,Ariadna Valentina; Sazima, Marlies

    2006-01-01

    • Backgrounds and Aims The reproductive biology of a community can provide answers to questions related to the maintenance of the intraspecific pollen flow and reproductive success of populations, sharing and competition for pollinators and also questions on conservation of natural habitats affected by fragmentation processes. This work presents, for the first time, data on the occurrence and frequency of plant sexual systems for Caatinga communities, and a review of the breeding system studi...

  8. Ecogeography and utility to plant breeding of the crop wild relatives of sunflower (Helianthus annuus L.)

    Science.gov (United States)

    Crop wild relatives (CWR) are a rich source of genetic diversity for crop improvement. Combining ecogeographic and phylogenetic techniques can inform both conservation and breeding. Geographic occurrence, bioclimatic, and biophysical data were used to predict species distributions, range overlap and...

  9. Ecogeography and utility to plant breeding of the crop wild relatives of sunflower (Helianthus annuus L.)

    NARCIS (Netherlands)

    Kantar, M.B.; Sosa, C.C.; Khoury, C.K.; Castaneda-Alvarez, N.P.; Achicanoy, H.A.; Bernau, V.; Kane, N.C.; Marek, L.; Seiler, G.; Rieseberg, L.H.

    2015-01-01

    Crop wild relatives (CWR) are a rich source of genetic diversity for crop improvement. Combining ecogeographic and phylogenetic techniques can inform both conservation and breeding. Geographic occurrence, bioclimatic, and biophysical data were used to predict species distributions, range overlap and

  10. Seasonal Selection Preferences for Woody Plants by Breeding Herds of African Elephants (Loxodonta africana in a Woodland Savanna

    Directory of Open Access Journals (Sweden)

    J. J. Viljoen

    2013-01-01

    Full Text Available To evaluate dynamics of elephant herbivory, we assessed seasonal preferences for woody plants by African elephant breeding herds in the southeastern part of Kruger National Park (KNP between 2002 and 2005. Breeding herds had access to a variety of woody plants, and, of the 98 woody plant species that were recorded in the elephant's feeding areas, 63 species were utilized by observed animals. Data were recorded at 948 circular feeding sites (radius 5 m during wet and dry seasons. Seasonal preference was measured by comparing selection of woody species in proportion to their estimated availability and then ranked according to the Manly alpha (α index of preference. Animals demonstrated a selection preference in feeding on woody vegetation, and Grewia hexamita, Grewia bicolor, Grewia flavescens, and Grewia monticola were selected consistently more over all seasons. In addition, our results indicate that elephant herds have a low preference for at least some of the woody species prone to extirpation and that feeding preferences for woody plants do not account for the association of elephants and riparian fringe habitat.

  11. Reverse breeding: a novel breeding approach based on engineered meiosis

    NARCIS (Netherlands)

    Dirks, R.; Dun, van K.P.M.; Snoo, de B.; Berg, van den M.; Lelivelt, C.L.C.; Voermans, W.; Woudenberg, L.; Wit, de J.P.C.; Reinink, K.; Schut, J.W.; Jong, de J.H.S.G.M.; Wijnker, T.G.

    2009-01-01

    Reverse breeding (RB) is a novel plant breeding technique designed to directly produce parental lines for any heterozygous plant, one of the most sought after goals in plant breeding. RB generates perfectly complementing homozygous parental lines through engineered meiosis. The method is based on re

  12. Contribution and perspectives of quantitative genetics to plant breeding in Brazil

    Directory of Open Access Journals (Sweden)

    Fernando Henrique Ribeiro Barrozo Toledo

    2012-12-01

    Full Text Available The purpose of this article is to show how quantitative genetics has contributed to the huge genetic progress obtained inplant breeding in Brazil in the last forty years. The information obtained through quantitative genetics has given Brazilian breedersthe possibility of responding to innumerable questions in their work in a much more informative way, such as the use or not of hybridcultivars, which segregating population to use, which breeding method to employ, alternatives for improving the efficiency of selectionprograms, and how to handle the data of progeny and/or cultivars evaluations to identify the most stable ones and thus improverecommendations.

  13. Estimation of genealogical coancestry in plant species using a pedigree reconstruction algorithm and application to an oil palm breeding population.

    Science.gov (United States)

    Cros, David; Sánchez, Leopoldo; Cochard, Benoit; Samper, Patrick; Denis, Marie; Bouvet, Jean-Marc; Fernández, Jesús

    2014-04-01

    Explicit pedigree reconstruction by simulated annealing gave reliable estimates of genealogical coancestry in plant species, especially when selfing rate was lower than 0.6, using a realistic number of markers. Genealogical coancestry information is crucial in plant breeding to estimate genetic parameters and breeding values. The approach of Fernández and Toro (Mol Ecol 15:1657-1667, 2006) to estimate genealogical coancestries from molecular data through pedigree reconstruction was limited to species with separate sexes. In this study it was extended to plants, allowing hermaphroditism and monoecy, with possible selfing. Moreover, some improvements were made to take previous knowledge on the population demographic history into account. The new method was validated using simulated and real datasets. Simulations showed that accuracy of estimates was high with 30 microsatellites, with the best results obtained for selfing rates below 0.6. In these conditions, the root mean square error (RMSE) between the true and estimated genealogical coancestry was small (0.9) and a low RMSE (pedigree data were scarce. The estimated genealogical coancestries were highly correlated (>0.9) with the molecular coancestries using 100 markers. Reconstructed pedigrees were used to estimate effective population sizes. In conclusion, this method gave reliable genealogical coancestry estimates. The strategy was implemented in the software MOLCOANC 3.0.

  14. What should students in plant breeding know about the statistical aspects of genotype × Environment interactions?

    NARCIS (Netherlands)

    Eeuwijk, Van Fred A.; Bustos-Korts, Daniela V.; Malosetti Zunin, Marcos

    2016-01-01

    A good statistical analysis of genotype × environment interactions (G × E) is a key requirement for progress in any breeding program. Data for G × E analyses traditionally come from multi-environment trials. In recent years, increasingly data are generated from managed stress trials, phenotyping

  15. FISH applications for genomics and plant breeding strategies in tomato and other Solanaceous crops

    NARCIS (Netherlands)

    Szinay, D.; Bai, Y.; Visser, R.G.F.; Jong, de J.H.

    2010-01-01

    This paper describes the use of advanced fluorescence in situ hybridization (FISH) technologies for genomics and breeding of tomato and related Solanum species. The first part deals with the major determinants of FISH technology: (1) spatial resolution, which depends on the diffraction limit of the

  16. Mapping quantitative trait loci in plant breeding populations : Use of parental haplotype sharing

    NARCIS (Netherlands)

    Jansen, Ritsert C.; Jannink, Jean-Luc; Beavis, William D.

    2003-01-01

    Applied breeding programs evaluate large numbers of progeny derived from multiple related crosses for a wide range of agronomic traits and for tens to hundreds of molecular markers. This study was conducted to determine how these phenotypic and genetic data could be used for routinely mapping quanti

  17. The potential of effector-target genes in breeding for plant innate immunity

    NARCIS (Netherlands)

    Gawehns, F.; Cornelissen, B.J.C.; Takken, F.L.W.

    2013-01-01

    Increasing numbers of infectious crop diseases that are caused by fungi and oomycetes urge the need to develop alternative strategies for resistance breeding. As an alternative for the use of resistance (R) genes, the application of mutant susceptibility (S) genes has been proposed as a potentially

  18. MT BB: Tomato cultivar for practical classes of plant genetics and breeding

    Directory of Open Access Journals (Sweden)

    Fernando Angelo Piotto

    2013-01-01

    Full Text Available MT BB cultivar originated from a backcross program which aimed at adding two recessive mutations that alter leaf architecture(potato leaf – c and flower color (white flower – wf to Micro-Tom cultivar, which is a tomato miniature. MT BB was developedfor use in practical classes of genetics and breeding in both undergraduate and graduate courses.

  19. The use of agrobiodiversity for plant improvement and the intellectual property paradigm: institutional fit and legal tools for mass selection, conventional and molecular plant breeding.

    Science.gov (United States)

    Batur, Fulya; Dedeurwaerdere, Tom

    2014-12-01

    Focused on the impact of stringent intellectual property mechanisms over the uses of plant agricultural biodiversity in crop improvement, the article delves into a systematic analysis of the relationship between institutional paradigms and their technological contexts of application, identified as mass selection, controlled hybridisation, molecular breeding tools and transgenics. While the strong property paradigm has proven effective in the context of major leaps forward in genetic engineering, it faces a systematic breakdown when extended to mass selection, where innovation often displays a collective nature. However, it also creates partial blockages in those innovation schemes rested between on-farm observation and genetic modification, i.e. conventional plant breeding and upstream molecular biology research tools. Neither overly strong intellectual property rights, nor the absence of well delineated protection have proven an optimal fit for these two intermediary socio-technological systems of cumulative incremental innovation. To address these challenges, the authors look at appropriate institutional alternatives which can create effective incentives for in situ agrobiodiversity conservation and the equitable distribution of technologies in plant improvement, using the flexibilities of the TRIPS Agreement, the liability rules set forth in patents or plant variety rights themselves (in the form of farmers', breeders' and research exceptions), and other ad hoc reward regimes.

  20. A review of the latest concepts in molecular plant pathology and applications to potato breeding

    Science.gov (United States)

    Co-evolution between pathogens and plants has led to the development of a range of constitutive and inducible resistance mechanisms that help plants survive pathogen attack. Different models have been proposed to describe the plant immune system. The most popular current model indicates that plants ...

  1. Virtual Plants Need Water Too: Functional-Structural Root System Models in the Context of Drought Tolerance Breeding

    Directory of Open Access Journals (Sweden)

    Adama Ndour

    2017-09-01

    Full Text Available Developing a sustainable agricultural model is one of the great challenges of the coming years. The agricultural practices inherited from the Green Revolution of the 1960s show their limits today, and new paradigms need to be explored to counter rising issues such as the multiplication of climate-change related drought episodes. Two such new paradigms are the use of functional-structural plant models to complement and rationalize breeding approaches and a renewed focus on root systems as untapped sources of plant amelioration. Since the late 1980s, numerous functional and structural models of root systems were developed and used to investigate the properties of root systems in soil or lab-conditions. In this review, we focus on the conception and use of such root models in the broader context of research on root-driven drought tolerance, on the basis of root system architecture (RSA phenotyping. Such models result from the integration of architectural, physiological and environmental data. Here, we consider the different phenotyping techniques allowing for root architectural and physiological study and their limits. We discuss how QTL and breeding studies support the manipulation of RSA as a way to improve drought resistance. We then go over the integration of the generated data within architectural models, how those architectural models can be coupled with functional hydraulic models, and how functional parameters can be measured to feed those models. We then consider the assessment and validation of those hydraulic models through confrontation of simulations to experimentations. Finally, we discuss the up and coming challenges facing root systems functional-structural modeling approaches in the context of breeding.

  2. Germplasm and breeding research of tea plant based on DNA marker approaches

    Institute of Scientific and Technical Information of China (English)

    2008-01-01

    Tea is the most popular non-alcoholic and healthy beverage worldwide.Tea production contributes greatly to the economy and the job opportunities for many countries in Asia and Africa.Meanwhile,the germplasm of tea,with a huge potential for the future of the whole tea industry,is presently one of the most valuable and fundamental materials for tea breeding and tea biotechnology.DNA molecular markers have been proven to be robust and valuable approaches in the studies of genetic diversity and variation,molecular identification,molecular phylogenetics,genetic stability and integrity of tea germplasm,and the genetic linkage map for breeding of tea.In this paper,a brief prospect on the molecular marker studies of tea has been summarized.The purpose is to provide an effective way for undertaking a massive tea germplasm appraisal and evaluation,to develop new applicable and cheap DNA markers,to establish a high density genetic linkage map and analyze the agronomically important QTLs,and finally,to facilitate the marker assisted early selection and shorten breeding procedures in tea.

  3. Experimental evidence for the ancestry of allotetraploid Trifolium repens and creation of synthetic forms with value for plant breeding

    Directory of Open Access Journals (Sweden)

    Williams Warren M

    2012-04-01

    Full Text Available Abstract Background White clover (Trifolium repens is a ubiquitous weed of the temperate world that through use of improved cultivars has also become the most important legume of grazed pastures world-wide. It has long been suspected to be allotetraploid, but the diploid ancestral species have remained elusive. Putative diploid ancestors were indicated by DNA sequence phylogeny to be T. pallescens and T. occidentale. Here, we use further DNA evidence as well as a combination of molecular cytogenetics (FISH and GISH and experimental hybridization to test the hypothesis that white clover originated as a hybrid between T. pallescens and T. occidentale. Results T. pallescens plants were identified with chloroplast trnL intron DNA sequences identical to those of white clover. Similarly, T. occidentale plants with nuclear ITS sequences identical to white clover were also identified. Reciprocal GISH experiments, alternately using labeled genomic DNA probes from each of the putative ancestral species on the same white clover cells, showed that half of the chromosomes hybridized with each probe. F1 hybrids were generated by embryo rescue and these showed strong interspecific chromosome pairing and produced a significant frequency of unreduced gametes, indicating the likely mode of polyploidization. The F1 hybrids are inter-fertile with white clover and function as synthetic white clovers, a valuable new resource for the re-incorporation of ancestral genomes into modern white clover for future plant breeding. Conclusions Evidence from DNA sequence analyses, molecular cytogenetics, interspecific hybridization and breeding experiments supports the hypothesis that a diploid alpine species (T. pallescens hybridized with a diploid coastal species (T. occidentale to generate tetraploid T. repens. The coming together of these two narrowly adapted species (one alpine and the other maritime, along with allotetraploidy, has led to a transgressive hybrid with a

  4. Combining partially ranked data in plant breeding and biology: II. Analysis with Rasch model

    Directory of Open Access Journals (Sweden)

    Ivan Simko

    2010-07-01

    Full Text Available Many years of breeding experiments, germplasm screening, and molecular biologic experimentation have generated volumes of sequence, genotype, and phenotype information that have been stored in public data repositories. These resources afford genetic and genomic researchers the opportunity to handle and analyze raw data from multiple laboratories and study groups whose research interests revolve around a common or closely related trait. However, although such data sets are widely available for secondary analysis, their heterogeneous nature often precludes their direct combination and joint exploration. Integration of phenotype information across multiple studies and databases is challenging due to variations in the measurement instruments, endpoint classifications, and biological material employed by each investigator. In the present work, we demonstrate how Rasch measurement model can surmount these problems. The model allows incorporating data sets with partially overlapping variables, large numbers of missing data points and dissimilar ratings of phenotypic endpoints. The model also enables quantifying the extent of heterogeneity between data sets. Biologists can use the model in a data-mining process to obtain combined ratings from various databases and other sources. Subsequently, these ratings can be used for selecting desirable material or (in combination with genotypic information for mapping genes involved in the particular trait. The model is not limited to genetics and breeding and can be applied in many other areas of biology and agriculture.

  5. Climate change may alter breeding ground distributions of eastern migratory monarchs (Danaus plexippus via range expansion of Asclepias host plants.

    Directory of Open Access Journals (Sweden)

    Nathan P Lemoine

    Full Text Available Climate change can profoundly alter species' distributions due to changes in temperature, precipitation, or seasonality. Migratory monarch butterflies (Danaus plexippus may be particularly susceptible to climate-driven changes in host plant abundance or reduced overwintering habitat. For example, climate change may significantly reduce the availability of overwintering habitat by restricting the amount of area with suitable microclimate conditions. However, potential effects of climate change on monarch northward migrations remain largely unknown, particularly with respect to their milkweed (Asclepias spp. host plants. Given that monarchs largely depend on the genus Asclepias as larval host plants, the effects of climate change on monarch northward migrations will most likely be mediated by climate change effects on Asclepias. Here, I used MaxEnt species distribution modeling to assess potential changes in Asclepias and monarch distributions under moderate and severe climate change scenarios. First, Asclepias distributions were projected to extend northward throughout much of Canada despite considerable variability in the environmental drivers of each individual species. Second, Asclepias distributions were an important predictor of current monarch distributions, indicating that monarchs may be constrained as much by the availability of Asclepias host plants as environmental variables per se. Accordingly, modeling future distributions of monarchs, and indeed any tightly coupled plant-insect system, should incorporate the effects of climate change on host plant distributions. Finally, MaxEnt predictions of Asclepias and monarch distributions were remarkably consistent among general circulation models. Nearly all models predicted that the current monarch summer breeding range will become slightly less suitable for Asclepias and monarchs in the future. Asclepias, and consequently monarchs, should therefore undergo expanded northern range limits in

  6. Climate change may alter breeding ground distributions of eastern migratory monarchs (Danaus plexippus) via range expansion of Asclepias host plants.

    Science.gov (United States)

    Lemoine, Nathan P

    2015-01-01

    Climate change can profoundly alter species' distributions due to changes in temperature, precipitation, or seasonality. Migratory monarch butterflies (Danaus plexippus) may be particularly susceptible to climate-driven changes in host plant abundance or reduced overwintering habitat. For example, climate change may significantly reduce the availability of overwintering habitat by restricting the amount of area with suitable microclimate conditions. However, potential effects of climate change on monarch northward migrations remain largely unknown, particularly with respect to their milkweed (Asclepias spp.) host plants. Given that monarchs largely depend on the genus Asclepias as larval host plants, the effects of climate change on monarch northward migrations will most likely be mediated by climate change effects on Asclepias. Here, I used MaxEnt species distribution modeling to assess potential changes in Asclepias and monarch distributions under moderate and severe climate change scenarios. First, Asclepias distributions were projected to extend northward throughout much of Canada despite considerable variability in the environmental drivers of each individual species. Second, Asclepias distributions were an important predictor of current monarch distributions, indicating that monarchs may be constrained as much by the availability of Asclepias host plants as environmental variables per se. Accordingly, modeling future distributions of monarchs, and indeed any tightly coupled plant-insect system, should incorporate the effects of climate change on host plant distributions. Finally, MaxEnt predictions of Asclepias and monarch distributions were remarkably consistent among general circulation models. Nearly all models predicted that the current monarch summer breeding range will become slightly less suitable for Asclepias and monarchs in the future. Asclepias, and consequently monarchs, should therefore undergo expanded northern range limits in summer months

  7. Plant glandular trichomes as targets for breeding or engineering of resistance to herbivores

    NARCIS (Netherlands)

    Glas, J.J.; Schimmel, B.C.J.; Alba, J.M.; Escobar-Bravo, R.; Schuurink, R.C.; Kant, M.R.

    2012-01-01

    Glandular trichomes are specialized hairs found on the surface of about 30% of all vascular plants and are responsible for a significant portion of a plant's secondary chemistry. Glandular trichomes are an important source of essential oils, i.e., natural fragrances or products that can be used by

  8. Optimizing the number of progenies and replications in plant breeding experiments

    Directory of Open Access Journals (Sweden)

    João Luís da Silva Filho

    2013-01-01

    Full Text Available A determination criterion was proposed for the number of replications, r, and of evaluated progenies, Nr, given P experimentalplots, with Nr=P/r, and n progenies to be selected; its application was discussed in the selection of progenies of bulk populations,derived from two homozygous parents. For a known heritability at the plot level, h20, there is a critical n below which the gain isgreater with selection evaluating P/(r+1 progenies in r+1 than P/r progenies in r replications. Different h20 scenarios were simulatedin the F2 and F∞ generations, assuming no dominance. It was demonstrated that at any h20 , if n > 18.5% of P, larger gains are obtainedby assuming Nr = P, showing that the augmented block design could be used in the early stages of breeding programs. The higher h20,the higher must be the selection intensity to justify the use of additional replications.

  9. Plant sexual systems and a review of the breeding system studies in the Caatinga, a Brazilian tropical dry forest.

    Science.gov (United States)

    Machado, Isabel Cristina; Lopes, Ariadna Valentina; Sazima, Marlies

    2006-02-01

    The reproductive biology of a community can provide answers to questions related to the maintenance of the intraspecific pollen flow and reproductive success of populations, sharing and competition for pollinators and also questions on conservation of natural habitats affected by fragmentation processes. This work presents, for the first time, data on the occurrence and frequency of plant sexual systems for Caatinga communities, and a review of the breeding system studies of Caatinga species. The sexual systems of 147 species from 34 families and 91 genera occurring in three Caatinga areas in north-eastern Brazil were analysed and compared with worldwide studies focusing on reproductive biology of different tropical communities. The frequency of hermaphrodite species was 83.0 % (122 species), seven of these (or 4.8 % of the total) being heterostylous. Monoecy occurred in 9.5 % (14) of the species, and andromonoecy in 4.8 % (seven). Only 2.7 % (four) of the species were dioecious. A high percentage of hermaphrodite species was expected and has been reported for other tropical ecosystems. With respect to the breeding system studies with species of the Caatinga, the authors' data for 21 species and an additional 18 species studied by others (n = 39) revealed a high percentage (61.5 %) of obligatory self-incompatibility. Agamospermy was not recorded among the Caatinga studied species. The plant sexual systems in the Caatinga, despite the semi-arid climate, are similar to other tropical dry and wet forest communities, including those with high rainfall levels, except for the much lower percentage of dioecious species. The high frequency of self-incompatible species is similar to that reported for Savanna areas in Brazil, and also for dry (deciduous and semideciduous) and humid tropical forest communities.

  10. Where are we now as we merge genomics into plant breeding and what are our limitations? Experiences from RosBREED

    NARCIS (Netherlands)

    Iezzoni, A.; Weebadde, C.; Peace, C.; Main, D.; Bassil, N.V.; Coe, M.; Fazio, G.; Gallardo, K.; Gasic, K.; Luby, J.; McFerson, J.; De Weg, Van E.; Yue, C.

    2016-01-01

    The complete genome sequences of apple, peach, and diploid strawberry - one member of each of the three main fruit-producing branches of the Rosaceae tree - were available in 2010. Despite this achievement, virtually none of this genomics knowledge was being used to assist breeding efforts of the

  11. Tritium Breeding Blanket for a Commercial Fusion Power Plant - A System Engineering Assessment

    Energy Technology Data Exchange (ETDEWEB)

    Meier, Wayne R. [Lawrence Livermore National Lab. (LLNL), Livermore, CA (United States)

    2014-04-14

    The goal of developing a new source of electric power based on fusion has been pursued for decades. If successful, future fusion power plants will help meet growing world-wide demand for electric power. A key feature and selling point for fusion is that its fuel supply is widely distributed globally and virtually inexhaustible. Current world-wide research on fusion energy is focused on the deuterium-tritium (DT for short) fusion reaction since it will be the easiest to achieve in terms of the conditions (e.g., temperature, density and confinement time of the DT fuel) required to produce net energy. Over the past decades countless studies have examined various concepts for TBBs for both magnetic fusion energy (MFE) and inertial fusion energy (IFE). At this time, the key organizations involved are government sponsored research organizations world-wide. The near-term focus of the MFE community is on the development of TBB mock-ups to be tested on the ITER tokamak currently under construction in Caderache France. TBB concepts for IFE tend to be different from MFE primarily due to significantly different operating conditions and constraints. This report focuses on longer-term commercial power plants where the key stakeholders include: electric utilities, plant owner and operator, manufacturer, regulators, utility customers, and in-plant subsystems including the heat transfer and conversion systems, fuel processing system, plant safety systems, and the monitoring control systems.

  12. Transcriptomic Analysis Using Olive Varieties and Breeding Progenies Identifies Candidate Genes Involved in Plant Architecture.

    Science.gov (United States)

    González-Plaza, Juan J; Ortiz-Martín, Inmaculada; Muñoz-Mérida, Antonio; García-López, Carmen; Sánchez-Sevilla, José F; Luque, Francisco; Trelles, Oswaldo; Bejarano, Eduardo R; De La Rosa, Raúl; Valpuesta, Victoriano; Beuzón, Carmen R

    2016-01-01

    Plant architecture is a critical trait in fruit crops that can significantly influence yield, pruning, planting density and harvesting. Little is known about how plant architecture is genetically determined in olive, were most of the existing varieties are traditional with an architecture poorly suited for modern growing and harvesting systems. In the present study, we have carried out microarray analysis of meristematic tissue to compare expression profiles of olive varieties displaying differences in architecture, as well as seedlings from their cross pooled on the basis of their sharing architecture-related phenotypes. The microarray used, previously developed by our group has already been applied to identify candidates genes involved in regulating juvenile to adult transition in the shoot apex of seedlings. Varieties with distinct architecture phenotypes and individuals from segregating progenies displaying opposite architecture features were used to link phenotype to expression. Here, we identify 2252 differentially expressed genes (DEGs) associated to differences in plant architecture. Microarray results were validated by quantitative RT-PCR carried out on genes with functional annotation likely related to plant architecture. Twelve of these genes were further analyzed in individual seedlings of the corresponding pool. We also examined Arabidopsis mutants in putative orthologs of these targeted candidate genes, finding altered architecture for most of them. This supports a functional conservation between species and potential biological relevance of the candidate genes identified. This study is the first to identify genes associated to plant architecture in olive, and the results obtained could be of great help in future programs aimed at selecting phenotypes adapted to modern cultivation practices in this species.

  13. Transcriptomic analysis using olive varieties and breeding progenies identify candidate genes involved in plant architecture

    Directory of Open Access Journals (Sweden)

    Juan José eGonzález Plaza

    2016-03-01

    Full Text Available Plant architecture is a critical trait in fruit crops that can significantly influence yield, pruning, planting density and harvesting. Little is known about how plant architecture is genetically determined in olive, were most of the existing varieties are traditional with an architecture poorly suited for modern growing and harvesting systems. In the present study, we have carried out microarray analysis of meristematic tissue to compare expression profiles of olive varieties displaying differences in architecture, as well as seedlings from their cross pooled on the basis of their sharing architecture-related phenotypes. The microarray used, previously developed by our group has already been applied to identify candidates genes involved in regulating juvenile to adult transition in the shoot apex of seedlings. Varieties with distinct architecture phenotypes and individuals from segregating progenies displaying opposite architecture features were used to link phenotype to expression. Here, we identify 2,252 differentially expressed genes associated to differences in plant architecture. Microarray results were validated by quantitative RT-PCR carried out on genes with functional annotation likely related to plant architecture. Twelve of these genes were further analyzed in individual seedlings of the corresponding pool. We also examined Arabidopsis mutants in putative orthologs of these targeted candidate genes, finding altered architecture for most of them. This supports a functional conservation between species and potential biological relevance of the candidate genes identified. This study is the first to identify genes associated to plant architecture in olive, and the results obtained could be of great help in future programs aimed at selecting phenotypes adapted to modern cultivation practices in this species.

  14. QTL mapping of soybean oil content for marker-assisted selection in plant breeding program.

    Science.gov (United States)

    Leite, D C; Pinheiro, J B; Campos, J B; Di Mauro, A O; Unêda-Trevisoli, S H

    2016-03-18

    The present study was undertaken to detect and map the quantitative trait loci (QTL) related to soybean oil content. We used 244 progenies derived from a bi-parental cross of the Lineage 69 (from Universidade Estadual Paulista "Júlio de Mesquita Filho"/Faculdade de Ciências Agrárias e Veterinárias - Breeding Program) and Tucunaré cultivar. A total of 358 simple sequence repeat (SSR; microsatellite) markers were used to investigate the polymorphism between the parental lines, and for the polymorphic lines all the F2 individuals were tested. Evaluation of the oil content and phenotype was performed with the aid of a Tango equipment by near infra-red reflectance spectroscopy, using single F2 seeds and F2:3 progenies, in triplicate. The data were analyzed by QTL Cartographer program for 56 SSR polymorphic markers. Two oil-content related QTLs were detected on K and H linkage groups. The total phenotypic variation explained by QTLs ranged from 7.8 to 46.75% for oil content. New QTLs were identified for the oil content in addition to those previously identified in other studies. The results reported in this study show that regions different from those already known could be involved in the genetic control of soybean oil content.

  15. Do transgenesis and marker-assisted backcross breeding produce substantially equivalent plants? - A comparative study of transgenic and backcross rice carrying bacterial blight resistant gene Xa21

    OpenAIRE

    Gao, Lifen; Cao, Yinghao; Xia, Zhihui; Jiang, Guanghuai; Liu, Guozhen; Zhang, Weixiong; Zhai, Wenxue

    2013-01-01

    Background The potential impact of genetically modified (GM) plants on human health has attracted much attention worldwide, and the issue remains controversial. This is in sharp contrast to the broad acceptance of plants produced by breeding through Marker Assisted Backcrossing (MAB). Results Focusing on transcriptome variation and perturbation to signaling pathways, we assessed the molecular and biological aspects of substantial equivalence, a general principle for food safety endorsed by th...

  16. Tertiary combination of freeze-dried urine of Indian breeds of cow with plant products against snail Lymnaea acuminata.

    Science.gov (United States)

    Kumar, Shiv; Singh, D K; Singh, Vinay Kumar

    2012-10-15

    Snail Lymnaea acuminata is the intermediate host of liver fluke Fasciola gigantica, which cause endemic fasciolosis among cattle population of eastern Uttar Pradesh. Control of snail population by molluscicides is one of the effective methods to control fasciolosis. In the present study molluscicidal activity of tertiary combination of freeze-dried urine of different Indian breeds of cow Sahiwal, Geer and Tharparkar with Annona squamosa seed powder, Ferula asafoetida root latex, Azadirachta indica oil and Camellia sinensis leaves have been tested against Lymnaea acuminata. It was noted that the toxicity of tertiary combination (1:1:5) of cow urine kept for 15 days in sunlight or laboratory condition with different plant products were highly toxic against snail L. acuminata. 96 h LC50 of tertiary combinations with Sahiwal urine kept for 15 days in sunlight with A. squamosa, F. asafoetida, A. indica oil and C. sinensis were 35.47 mg L(-1), 37.13 mg L(-1), 33.66 mg L(-1), respectively higher than the Geer and Tharparkar. The toxicity of Sahiwal urine kept for 15 days in laboratory condition with A. squamosa and C. sinensis (96 h LC50 28.28 mg L(-1)) was more potent than the all other combinations. Cow urine in combination with plant product can be used for effective control of snail.

  17. Spectral Knowledge (SK-UTALCA): Software for Exploratory Analysis of High-Resolution Spectral Reflectance Data on Plant Breeding

    Science.gov (United States)

    Lobos, Gustavo A.; Poblete-Echeverría, Carlos

    2017-01-01

    This article describes public, free software that provides efficient exploratory analysis of high-resolution spectral reflectance data. Spectral reflectance data can suffer from problems such as poor signal to noise ratios in various wavebands or invalid measurements due to changes in incoming solar radiation or operator fatigue leading to poor orientation of sensors. Thus, exploratory data analysis is essential to identify appropriate data for further analyses. This software overcomes the problem that analysis tools such as Excel are cumbersome to use for the high number of wavelengths and samples typically acquired in these studies. The software, Spectral Knowledge (SK-UTALCA), was initially developed for plant breeding, but it is also suitable for other studies such as precision agriculture, crop protection, ecophysiology plant nutrition, and soil fertility. Various spectral reflectance indices (SRIs) are often used to relate crop characteristics to spectral data and the software is loaded with 255 SRIs which can be applied quickly to the data. This article describes the architecture and functions of SK-UTALCA and the features of the data that led to the development of each of its modules. PMID:28119705

  18. Complete chloroplast genome sequence of an orchid model plant candidate: Erycina pusilla apply in tropical Oncidium breeding.

    Directory of Open Access Journals (Sweden)

    I-Chun Pan

    Full Text Available Oncidium is an important ornamental plant but the study of its functional genomics is difficult. Erycina pusilla is a fast-growing Oncidiinae species. Several characteristics including low chromosome number, small genome size, short growth period, and its ability to complete its life cycle in vitro make E. pusilla a good model candidate and parent for hybridization for orchids. Although genetic information remains limited, systematic molecular analysis of its chloroplast genome might provide useful genetic information. By combining bacterial artificial chromosome (BAC clones and next-generation sequencing (NGS, the chloroplast (cp genome of E. pusilla was sequenced accurately, efficiently and economically. The cp genome of E. pusilla shares 89 and 84% similarity with Oncidium Gower Ramsey and Phalanopsis aphrodite, respectively. Comparing these 3 cp genomes, 5 regions have been identified as showing diversity. Using PCR analysis of 19 species belonging to the Epidendroideae subfamily, a conserved deletion was found in the rps15-trnN region of the Cymbidieae tribe. Because commercial Oncidium varieties in Taiwan are limited, identification of potential parents using molecular breeding method has become very important. To demonstrate the relationship between taxonomic position and hybrid compatibility of E. pusilla, 4 DNA regions of 36 tropically adapted Oncidiinae varieties have been analyzed. The results indicated that trnF-ndhJ and trnH-psbA were suitable for phylogenetic analysis. E. pusilla proved to be phylogenetically closer to Rodriguezia and Tolumnia than Oncidium, despite its similar floral appearance to Oncidium. These results indicate the hybrid compatibility of E. pusilla, its cp genome providing important information for Oncidium breeding.

  19. [Molecular aspects of allergy to plant products. Part III. Panallergens and breeding of hypoallergenic cultivars].

    Science.gov (United States)

    Bokszczanin, Kamila Ł; Przybyła, Andrzej A

    2012-04-01

    In addition to major allergens, also minor allergens, i.e. panallergens have been shown to be responsible for many IgE cross-reactions even between unrelated pollen and plant food allergen sources. It can be explained also by cross-allergenicity underlying the T cell response to conserved regions of panallergens. In this article, we focus on known panallergens which presently comprise a few protein families, including non-specific lipid transfer proteins (nsLTP) (PR-14), thaumatin like proteins (TLP) (PR-5), profilins, and polcalcins. Food allergy has an impact on the quality of life of an allergic patient. The way of developing novel plant cultivars with decreased allergenicity and possibility of down-regulating the expression of an allergen by genetic modification are discussed.

  20. Kazusa Marker DataBase: a database for genomics, genetics, and molecular breeding in plants

    OpenAIRE

    2014-01-01

    In order to provide useful genomic information for agronomical plants, we have established a database, the Kazusa Marker DataBase (http://marker.kazusa.or.jp). This database includes information on DNA markers, e.g., SSR and SNP markers, genetic linkage maps, and physical maps, that were developed at the Kazusa DNA Research Institute. Keyword searches for the markers, sequence data used for marker development, and experimental conditions are also available through this database. Currently, 10...

  1. RNA Interference (RNAi) Induced Gene Silencing: A Promising Approach of Hi-Tech Plant Breeding.

    Science.gov (United States)

    Younis, Adnan; Siddique, Muhammad Irfan; Kim, Chang-Kil; Lim, Ki-Byung

    2014-01-01

    RNA interference (RNAi) is a promising gene regulatory approach in functional genomics that has significant impact on crop improvement which permits down-regulation in gene expression with greater precise manner without affecting the expression of other genes. RNAi mechanism is expedited by small molecules of interfering RNA to suppress a gene of interest effectively. RNAi has also been exploited in plants for resistance against pathogens, insect/pest, nematodes, and virus that cause significant economic losses. Keeping beside the significance in the genome integrity maintenance as well as growth and development, RNAi induced gene syntheses are vital in plant stress management. Modifying the genes by the interference of small RNAs is one of the ways through which plants react to the environmental stresses. Hence, investigating the role of small RNAs in regulating gene expression assists the researchers to explore the potentiality of small RNAs in abiotic and biotic stress management. This novel approach opens new avenues for crop improvement by developing disease resistant, abiotic or biotic stress tolerant, and high yielding elite varieties.

  2. Mutation breedings in ornamental plants. Technique used for radiation induced mutant in begonia, chrysanthemum, aberia and winter daphne

    Energy Technology Data Exchange (ETDEWEB)

    Matsubara, Hisao

    1984-03-01

    Several methods of obtaining somatic mutant plants by el-ray irradiation on pieces of tissues as in vitro adventitious bud technique or small cutting methods with repeated pruning are described. The irradiation to the adventitious buds in the small pieces of organ cultured in vitro and to the small cuttings are employed. Culture beds of agar or of Japanese Kanuma soil were used in vitro culture. In these experiments, Japanese Kanuma soil bed in in vitro culture worked well for root development and transplant of the induced mutants. Combination with in vitro culture and repeated pruning technique were used for isolation and fixation of solid somatic mutant from small sectorial mutation induced by irradiation. This method was successful for begonia, chrysanthemum, aberia and winter daphne. These data indicates that most of the induced mutant plants were non-chimeric, while a few others were chimeric. Among the new varieties, ''Gin-Sei'', ''Ryoku-Ha'', ''Big-Cross'', ''Kaede-Iron'', ''Mei-Fu-Hana-Tsukubane-Utsugi'' and ''Daphne-el-3'' are non-chimeric, and ''Mini-Mini-Iron'' and ''Orange-Iron'' are chimeric. Moreover, these new varieties have remarkably differed in size and in color pattern from original variety. From the experimental results of somatic mutation, it is indicated that plant tissue culture have enormous potential in radiation breeding and in rapid propagation of the somatic mutant. (author).

  3. Pollination and breeding system of the enigmatic South African parasitic plant Mystropetalon thomii (Mystropetalaceae): rodents welcome, but not needed.

    Science.gov (United States)

    Hobbhahn, N; Steenhuisen, S-L; Olsen, T; Midgley, J J; Johnson, S D

    2017-09-01

    Unrelated plants adapted to particular pollinator types tend to exhibit convergent evolution in floral traits. However, inferences about likely pollinators from 'pollination syndromes' can be problematic due to trait overlap among some syndromes and unusual floral architecture in some lineages. An example is the rare South African parasitic plant Mystropetalon thomii (Mystropetalaceae), which has highly unusual brush-like inflorescences that exhibit features of both bird and rodent pollination syndromes. We used camera traps to record flower visitors, quantified floral spectral reflectance and nectar and scent production, experimentally determined self-compatibility and breeding system, and studied pollen dispersal using fluorescent dyes. The dark-red inflorescences are usually monoecious, with female flowers maturing before male flowers, but some inflorescences are purely female (gynoecious). Inflorescences were visited intensively by several rodent species that carried large pollen loads, while visits by birds were extremely rare. Rodents prefer male- over female-phase inflorescences, likely because of the male flowers' higher nectar and scent production. The floral scent contains several compounds known to attract rodents. Despite the obvious pollen transfer by rodents, we found that flowers on both monoecious and gynoecious inflorescences readily set seed in the absence of rodents and even when all flower visitors are excluded. Our findings suggest that seed production occurs at least partially through apomixis and that M. thomii is not ecologically dependent on its rodent pollinators. Our study adds another species and family to the growing list of rodent-pollinated plants, thus contributing to our understanding of the floral traits associated with pollination by non-flying mammals. © 2017 German Botanical Society and The Royal Botanical Society of the Netherlands.

  4. A Direct Comparison of Remote Sensing Approaches for High-Throughput Phenotyping in Plant Breeding

    Science.gov (United States)

    Tattaris, Maria; Reynolds, Matthew P.; Chapman, Scott C.

    2016-01-01

    Remote sensing (RS) of plant canopies permits non-intrusive, high-throughput monitoring of plant physiological characteristics. This study compared three RS approaches using a low flying UAV (unmanned aerial vehicle), with that of proximal sensing, and satellite-based imagery. Two physiological traits were considered, canopy temperature (CT) and a vegetation index (NDVI), to determine the most viable approaches for large scale crop genetic improvement. The UAV-based platform achieves plot-level resolution while measuring several hundred plots in one mission via high-resolution thermal and multispectral imagery measured at altitudes of 30–100 m. The satellite measures multispectral imagery from an altitude of 770 km. Information was compared with proximal measurements using IR thermometers and an NDVI sensor at a distance of 0.5–1 m above plots. For robust comparisons, CT and NDVI were assessed on panels of elite cultivars under irrigated and drought conditions, in different thermal regimes, and on un-adapted genetic resources under water deficit. Correlations between airborne data and yield/biomass at maturity were generally higher than equivalent proximal correlations. NDVI was derived from high-resolution satellite imagery for only larger sized plots (8.5 × 2.4 m) due to restricted pixel density. Results support use of UAV-based RS techniques for high-throughput phenotyping for both precision and efficiency. PMID:27536304

  5. A direct comparison of remote sensing approaches for high-throughput phenotyping in plant breeding

    Directory of Open Access Journals (Sweden)

    Maria Tattaris

    2016-08-01

    Full Text Available Remote sensing (RS of plant canopies permits non-intrusive, high-throughput monitoring of plant physiological characteristics. This study compared three RS approaches using a low flying UAV (unmanned aerial vehicle, with that of proximal sensing, and satellite-based imagery. Two physiological traits were considered, canopy temperature (CT and a vegetation index (NDVI, to determine the most viable approaches for large scale crop genetic improvement. The UAV-based platform achieves plot-level resolution while measuring several hundred plots in one mission via high-resolution thermal and multispectral imagery measured at altitudes of 30-100 m. The satellite measures multispectral imagery from an altitude of 770 km. Information was compared with proximal measurements using IR thermometers and an NDVI sensor at a distance of 0.5-1m above plots. For robust comparisons, CT and NDVI were assessed on panels of elite cultivars under irrigated and drought conditions, in different thermal regimes, and on un-adapted genetic resources under water deficit. Correlations between airborne data and yield/biomass at maturity were generally higher than equivalent proximal correlations. NDVI was derived from high-resolution satellite imagery for only larger sized plots (8.5 x 2.4 m due to restricted pixel density. Results support use of UAV-based RS techniques for high-throughput phenotyping for both precision and efficiency.

  6. Vegetable Seedling Breeding with Biochar Produced from Invasive Plant Biomass in South West of China

    Science.gov (United States)

    Li, Guitong; Tian, Yanfang; Liu, Cheng; Cao, Jianhua; Lin, Qimei; Zhao, Xiaorong

    2015-04-01

    Crofton Weed (Ageratina adenophora) is an invasive plant widely colonized in the southwest part of China, such as Yunnan, Guizhou, and Sichuan. It is estimated that the total biomass of this small shrub in China can be as much as 30 million tones. Many methods have been developed to control its malignant expansion, mostly by using its leaves as feed for livestock. Its stem is difficult to use, although it accounts for more than 90% of its total biomass. A biochar production system, using the stems of Crofton Weed as feedstock, was established at Xi-Yu Biological Science and Technology Company, Pan-Zhi-hua, Sichuan Province, China. The system is composed of feeder, hot-air dryer, pyrolyser, activator, steam producer, and biochar-based fertilizer producer. The energy for producing hot-air to pre-dry the feedstock and steam to activate the carbonized material comes from the re-use of the heat yielded from the pyrolysis process. The whole system is in a high level of automation and energy efficiency. With this system, local farmers can improve their income by collecting stems of Crofton Weed and selling them to the producer. It is a practical way to control this kind of invasive plant by offering economic value for the local people. The biochar can be used to produce new seedling substrate by replacing peat to protect wetland resource. The biochar seedling media was produced in a simple way and the effects on growth of vegetable seedlings was evaluated. Results showed that the response of vegetable seeds to the biochar seedling media was different, meaning more detailed studies need to done to find the reasons for some kinds of seeds failed to germinate in the tested biochar seedling media. This research was supported by the Ministry of Science and Technology of China under the Public Industry Science and Technology Project (201103027).

  7. Recurrent Selection and Participatory Plant Breeding for Improvement of Two Organic Open-Pollinated Sweet Corn (Zea mays L. Populations

    Directory of Open Access Journals (Sweden)

    Adrienne C. Shelton

    2015-04-01

    Full Text Available Organic growers face unique challenges when raising sweet corn, and benefit from varieties that maintain high eating quality, germinate consistently, deter insect pests, and resist diseases. Genotype by environment rank changes can occur in the performance of cultivars grown on conventional and organic farms, yet few varieties have been bred specifically for organic systems. The objective of this experiment was to evaluate the changes made to open-pollinated sweet corn populations using recurrent selection and a participatory plant breeding (PPB methodology. From 2008 to 2011, four cycles of two open-pollinated (OP sweet corn populations were selected on a certified organic farm in Minnesota using a modified ear-to-row recurrent selection scheme. Selections were made in collaboration with an organic farmer, with selection criteria based on traits identified by the farmer. In 2012 and 2013, the population cycles were evaluated in a randomized complete block design in two certified organic locations in Wisconsin, with multiple replications in each environment. Significant linear trends were found among cycles of selection for quantitative and qualitative traits, suggesting the changes were due to recurrent selection and PPB methodology for these populations. However, further improvement is necessary to satisfy the requirements for a useful cultivar for organic growers.

  8. Numerical study of regional environmental carrying capacity for livestock and poultry farming based on planting-breeding balance.

    Science.gov (United States)

    Peng, Lihong; Bai, Yu

    2013-09-01

    In consideration of the need to maintain planting-breeding balance, this article examines the capacity of the soil in Putian City, Fujian Province to absorb livestock and poultry excreta, and computes the environmental carrying capacity for livestock and poultry farming (ECCLPF) in each district of the city in terms of the fertility characteristics of the soil in the city, as well as its mix of crops cultivated and farming methods. On the basis of the computations, this work proceeds to classify the alarm grades of the city's environmental carrying capacity for livestock and poultry framing, and assess the environmental impact of the livestock and poultry farming industry. The results of our study indicate that, the city's ECCLPF ranges from 8.27 to 23.23 heads per ha when computed on the basis of nitrogen, and from 5.79 to 24.53 heads per ha when computed on the basis of phosphorus. A comparison between our research findings and the existing farming scale in Putian reveals that, in certain parts of the city, ECCLPF is overburdened to varying degrees. Specifically, Chengxiang District is severely overburdened, Hanjiang District and Meizhou Island have a level of overburdening between virtual overburdening and significant overburdening, Licheng District is virtually overburdened, and Xiuyu, Xianyou, and Bei'an Districts have not exceeded their environmental carrying capacity and therefore have varying levels of potential for growth.

  9. Numerical study of regional environmental carrying capacity for livestock and poultry farming based on planting-breeding balance

    Institute of Scientific and Technical Information of China (English)

    Lihong Peng; Yu Bai

    2013-01-01

    In consideration of the need to maintain planting-breeding balance,this article examines the capacity of the soil in Putian City,Fujian Province to absorb livestock and poultry excreta,and computes the environmental carrying capacity for livestock and poultry farming (ECCLPF) in each district of the city in terms of the fertility characteristics of the soil in the city,as well as its mix of crops cultivated and farming methods.On the basis of the computations,this work proceeds to classify the alarm grades of the city's environmental carrying capacity for livestock and poultry framing,and assess the environmental impact of the livestock and poultry farming industry.The results of our study indicate that,the city's ECCLPF ranges from 8.27 to 23.23 heads per ha when computed on the basis of nitrogen,and from 5.79 to 24.53 heads per ha when computed on the basis of phosphorus.A comparison between our research findings and the existing fanning scale in Putian reveals that,in certain parts of the city,ECCLPF is overburdened to varying degrees.Specifically,Chengxiang District is severely overburdened,Hanjiang District and Meizhou Island have a level of overburdening between virtual overburdening and significant overburdening,Licheng District is virtually overburdened,and Xiuyu,Xianyou,and Bei'an Districts have not exceeded their environmental carrying capacity and therefore have varying levels of potential for growth.

  10. Behavior patterns of cows with Charolais or Nellore breed predominance fed diets with plant extract or monensin sodium

    Directory of Open Access Journals (Sweden)

    Luciane Rumpel Segabinazzi

    2011-12-01

    Full Text Available The objective of this research was to study the ingestive behavior of feedlot cows fed additives based on plant extracts or monensin sodium. Twenty-four Charolais and Nellore crossbred cows with age and average initial weight of 7 years and 423 kg, respectively, were used. The experimental diets were plant extracts: basal diet + 5 g/animal/day of a natural additive composed of 750 mg of essential oil of thyme (Thymus vulgaris, 150 mg of garlic (Allium sativum, 250 mg of rosemary extract (Rosmarimus officinalis, 250 mg of canola oil (Brassica napus, 250 mg extract of quillaja (Quillaja saponaria, and 3350 mg of corn starch; sodium monensin: basal diet + 300 mg/monensin/animal/day; and control: basal diet without additive. The basal diet contained sorghum silage and concentrate in a 62:38 ratio. The experimental design was completely randomized with a 3 × 2 (3 diets and 2 breed predominances factorial arrangement, and means were compared using DMS test at 5% of significance. The type of additive consumed did not alter animal feeding behavior. Cows with Charolais predominance consumed more dry matter (13.78 vs. 12.38 kg/day and neutral detergent fiber (7.81 vs. 6.89 kg/day, ruminated for longer (8.47 vs. 7.82 h, spent more time chewing (13.05 vs 12.01 h, had a greater number of chews per minute (58.88 vs 53.21 and a greater number of ruminal bolus (541.43 vs. 464.09 boluses/day; however, cows with Nellore predominance had greater idling time (11.82 vs. 10.74 h.

  11. 云环境下作物育种信息化模型研究%Research on Information Model of Plant Breeding under Cloud Environment

    Institute of Scientific and Technical Information of China (English)

    刘忠强; 王开义; 赵向宇; 李民赞

    2017-01-01

    在种业体制改革和兼并重组加速推进、行业集中度大幅提升的大背景下,开展育种技术创新、加强资源交流与联合育种是广大中小型育种企业提升核心竞争力的必然选择。为此,首先介绍了国内作物育种信息管理软件的应用现状,对云环境下开展作物育种信息化建设的优势进行了深入分析;接着,以中小型育种企业育种信息化为业务基础,研究云服务模式与作物育种信息管理业务的契合点,提出了云环境下的作物育种信息化模型。模型充分考虑了作物育种信息管理平台在云服务模式下的个性化、一体化及差异性等特点,支持精量播种机、测产测水等农机设备的统一对接平台、面向用户特征的多层次服务提供策略和基于数据挖掘的作物育种决策支持等方案,对广大中小型育种企业、高校科研院所育种团队及专业测试机构等开展信息化建设,实现资源共享、协同育种与联合测试,进而推进现代种业全面均衡发展,具有借鉴意义。%Under the background of seed industry structure restructuring,merger and reorganization accelerating and in-dustry concentration increasing,to carry out breeding technology innovation, strengthen the resources exchanging and joint breeding is the inevitable choice of majority of small and medium enterprises to enhance the core competitiveness. Firstly, introduced currently application status of domestic plant breeding information management software,and discussed the ad-vantages of information technology under the cloud environment. Next,researched the meeting point between cloud service mode and plant breeding information management business based on information of small and medium breeding enterpri-ses,and proposed plant breeding information model under cloud environments. This model fully considered personaliza-tion,integration,differentiation and other features of plant

  12. Application of next-generation sequencing for rapid marker development in molecular plant breeding: a case study on anthracnose disease resistance in Lupinus angustifolius L.

    OpenAIRE

    2012-01-01

    Abstract Background In the last 30 years, a number of DNA fingerprinting methods such as RFLP, RAPD, AFLP, SSR, DArT, have been extensively used in marker development for molecular plant breeding. However, it remains a daunting task to identify highly polymorphic and closely linked molecular markers for a target trait for molecular marker-assisted selection. The next-generation sequencing (NGS) technology is far more powerful than any existing generic DNA fingerprinting methods in generating ...

  13. Tertiary combination of freeze-dried urine of Indian breeds of cow with plant products against snail Lymnaea acuminata

    National Research Council Canada - National Science Library

    Kumar, Shiv; Singh, D K; Singh, Vinay Kumar

    2012-01-01

    .... In the present study molluscicidal activity of tertiary combination of freeze-dried urine of different Indian breeds of cow Sahiwal, Geer and Tharparkar with Annona squamosa seed powder, Ferula...

  14. Breeding-assisted genomics.

    Science.gov (United States)

    Poland, Jesse

    2015-04-01

    The revolution of inexpensive sequencing has ushered in an unprecedented age of genomics. The promise of using this technology to accelerate plant breeding is being realized with a vision of genomics-assisted breeding that will lead to rapid genetic gain for expensive and difficult traits. The reality is now that robust phenotypic data is an increasing limiting resource to complement the current wealth of genomic information. While genomics has been hailed as the discipline to fundamentally change the scope of plant breeding, a more symbiotic relationship is likely to emerge. In the context of developing and evaluating large populations needed for functional genomics, none excel in this area more than plant breeders. While genetic studies have long relied on dedicated, well-structured populations, the resources dedicated to these populations in the context of readily available, inexpensive genotyping is making this philosophy less tractable relative to directly focusing functional genomics on material in breeding programs. Through shifting effort for basic genomic studies from dedicated structured populations, to capturing the entire scope of genetic determinants in breeding lines, we can move towards not only furthering our understanding of functional genomics in plants, but also rapidly improving crops for increased food security, availability and nutrition.

  15. Application of next-generation sequencing for rapid marker development in molecular plant breeding: a case study on anthracnose disease resistance in Lupinus angustifolius L.

    Directory of Open Access Journals (Sweden)

    Yang Huaan

    2012-07-01

    Full Text Available Abstract Background In the last 30 years, a number of DNA fingerprinting methods such as RFLP, RAPD, AFLP, SSR, DArT, have been extensively used in marker development for molecular plant breeding. However, it remains a daunting task to identify highly polymorphic and closely linked molecular markers for a target trait for molecular marker-assisted selection. The next-generation sequencing (NGS technology is far more powerful than any existing generic DNA fingerprinting methods in generating DNA markers. In this study, we employed a grain legume crop Lupinus angustifolius (lupin as a test case, and examined the utility of an NGS-based method of RAD (restriction-site associated DNA sequencing as DNA fingerprinting for rapid, cost-effective marker development tagging a disease resistance gene for molecular breeding. Results Twenty informative plants from a cross of RxS (disease resistant x susceptible in lupin were subjected to RAD single-end sequencing by multiplex identifiers. The entire RAD sequencing products were resolved in two lanes of the 16-lanes per run sequencing platform Solexa HiSeq2000. A total of 185 million raw reads, approximately 17 Gb of sequencing data, were collected. Sequence comparison among the 20 test plants discovered 8207 SNP markers. Filtration of DNA sequencing data with marker identification parameters resulted in the discovery of 38 molecular markers linked to the disease resistance gene Lanr1. Five randomly selected markers were converted into cost-effective, simple PCR-based markers. Linkage analysis using marker genotyping data and disease resistance phenotyping data on a F8 population consisting of 186 individual plants confirmed that all these five markers were linked to the R gene. Two of these newly developed sequence-specific PCR markers, AnSeq3 and AnSeq4, flanked the target R gene at a genetic distance of 0.9 centiMorgan (cM, and are now replacing the markers previously developed by a traditional DNA

  16. Application of next-generation sequencing for rapid marker development in molecular plant breeding: a case study on anthracnose disease resistance in Lupinus angustifolius L.

    Science.gov (United States)

    Yang, Huaan; Tao, Ye; Zheng, Zequn; Li, Chengdao; Sweetingham, Mark W; Howieson, John G

    2012-07-17

    In the last 30 years, a number of DNA fingerprinting methods such as RFLP, RAPD, AFLP, SSR, DArT, have been extensively used in marker development for molecular plant breeding. However, it remains a daunting task to identify highly polymorphic and closely linked molecular markers for a target trait for molecular marker-assisted selection. The next-generation sequencing (NGS) technology is far more powerful than any existing generic DNA fingerprinting methods in generating DNA markers. In this study, we employed a grain legume crop Lupinus angustifolius (lupin) as a test case, and examined the utility of an NGS-based method of RAD (restriction-site associated DNA) sequencing as DNA fingerprinting for rapid, cost-effective marker development tagging a disease resistance gene for molecular breeding. Twenty informative plants from a cross of RxS (disease resistant x susceptible) in lupin were subjected to RAD single-end sequencing by multiplex identifiers. The entire RAD sequencing products were resolved in two lanes of the 16-lanes per run sequencing platform Solexa HiSeq2000. A total of 185 million raw reads, approximately 17 Gb of sequencing data, were collected. Sequence comparison among the 20 test plants discovered 8207 SNP markers. Filtration of DNA sequencing data with marker identification parameters resulted in the discovery of 38 molecular markers linked to the disease resistance gene Lanr1. Five randomly selected markers were converted into cost-effective, simple PCR-based markers. Linkage analysis using marker genotyping data and disease resistance phenotyping data on a F8 population consisting of 186 individual plants confirmed that all these five markers were linked to the R gene. Two of these newly developed sequence-specific PCR markers, AnSeq3 and AnSeq4, flanked the target R gene at a genetic distance of 0.9 centiMorgan (cM), and are now replacing the markers previously developed by a traditional DNA fingerprinting method for marker

  17. A simple language to script and simulate breeding schemes: the breeding scheme language

    Science.gov (United States)

    It is difficult for plant breeders to determine an optimal breeding strategy given that the problem involves many factors, such as target trait genetic architecture and breeding resource availability. There are many possible breeding schemes for each breeding program. Although simulation study may b...

  18. 薄荷属植物选种育种研究进展%Research progress on seed selection and breeding of Mentha's plants

    Institute of Scientific and Technical Information of China (English)

    周露; 谢文申

    2012-01-01

    综述了薄荷属植物挥发性成分的主要化学类型及近年来国内外薄荷属植物在选种育种方面的研究进展及发展趋势.希望对促进我国现阶段薄荷属植物的选育种工作有所帮助.%In this paper, the main chemical types of the volatility components in Mentha are summarized, and the research progress and developing tendency on seed selection and breeding of the plants are reviewed.

  19. From Mendel's discovery on pea to today's plant genetics and breeding : Commemorating the 150th anniversary of the reading of Mendel's discovery.

    Science.gov (United States)

    Smýkal, Petr; K Varshney, Rajeev; K Singh, Vikas; Coyne, Clarice J; Domoney, Claire; Kejnovský, Eduard; Warkentin, Thomas

    2016-12-01

    This work discusses several selected topics of plant genetics and breeding in relation to the 150th anniversary of the seminal work of Gregor Johann Mendel. In 2015, we celebrated the 150th anniversary of the presentation of the seminal work of Gregor Johann Mendel. While Darwin's theory of evolution was based on differential survival and differential reproductive success, Mendel's theory of heredity relies on equality and stability throughout all stages of the life cycle. Darwin's concepts were continuous variation and "soft" heredity; Mendel espoused discontinuous variation and "hard" heredity. Thus, the combination of Mendelian genetics with Darwin's theory of natural selection was the process that resulted in the modern synthesis of evolutionary biology. Although biology, genetics, and genomics have been revolutionized in recent years, modern genetics will forever rely on simple principles founded on pea breeding using seven single gene characters. Purposeful use of mutants to study gene function is one of the essential tools of modern genetics. Today, over 100 plant species genomes have been sequenced. Mapping populations and their use in segregation of molecular markers and marker-trait association to map and isolate genes, were developed on the basis of Mendel's work. Genome-wide or genomic selection is a recent approach for the development of improved breeding lines. The analysis of complex traits has been enhanced by high-throughput phenotyping and developments in statistical and modeling methods for the analysis of phenotypic data. Introgression of novel alleles from landraces and wild relatives widens genetic diversity and improves traits; transgenic methodologies allow for the introduction of novel genes from diverse sources, and gene editing approaches offer possibilities to manipulate gene in a precise manner.

  20. The Role of Biodiversity, Traditional Knowledge and Participatory Plant Breeding in Climate Change Adaptation in Karst Mountain Areas in SW China

    Energy Technology Data Exchange (ETDEWEB)

    Song, Yiching; Li, Jingsong [Center for Chinese Agricultural Policy (China)

    2011-07-15

    This is a report of a country case study on the impacts of climate change and local people's adaptation. The research sites are located in the karst mountainous region in 3 SW China provinces - Guangxi, Guizhou and Yunnan – an area inhabited by 33 ethnic groups of small farmers and the poor, with rich Plant Genetic Resources (PGR) and culture. Climate change is exacerbating already harsh natural conditions and impacting on biodiversity of remote farmers living in extreme poverty, with very limited arable land. Genetic diversity has also suffered from the adoption of high yielding hybrids. Yet traditional varieties, related TK and Participatory Plant Breeding (PPB) for maize and rice are showing real potential for resilience and adaptation.

  1. Importância, problemas e perspectivas do melhoramento visando resistência a viroses em plantas Importance, problems and perspectives of plant breeding concerning resistance to viruses

    Directory of Open Access Journals (Sweden)

    Rosa Lia Barbieri

    1995-01-01

    Full Text Available As viroses são um sério problema para a agricultura, podendo se tomar um fator limitante para o desenvolvimento de determinadas espécies. Medidas de controle, como a eliminação dos vetores, o uso de material sadio, a rotação de culturas e a erradicação de plantas infectadas são apenas soluções temporárias. A mais eficiente estratégia de controle envolve o uso de cultivares melhoradas para resistência ao vírus ou a seu vetor. A reduzida disponibilidade de fontes de resistência pode ser aumentada através da tecnologia do DNA recombinante, que traz novas perspectivas para o melhoramento de plantas resistentes a viroses.Virus diseases are a serious problem to agricuiture, can be a limitant factor to normal development of some crops. Control measures, like vectors elimination, healthy material use, culture rotation and infected plants eradication, are only transient solutions. The more efficient approach for control involves plant breeding resistant to virus or its vector. Reduced availability of resistance source can be increased through recombinant DNA technology, which brings new breeding perspectives to virus resistant crops.

  2. Advances on breeding technology of medicinal plants Salvia miltiorrhiza Bge%药用植物丹参繁育技术的研究进展

    Institute of Scientific and Technical Information of China (English)

    贾彩凤; 马晓莉; 秦桂芳; 魏志东; 李向阳

    2016-01-01

    丹参( Salvia miltiorrhiza Bge.)是临床治疗心血管系统疾病的常用中药。由于生产中长期的只种不选引起品种退化,导致药材产量和品质均有较大程度下降。为改良丹参的药材种质,提高产量和药用成分含量,确保临床用药质量,有关丹参的品种选育与繁殖技术的研究报道不断推陈出新。从良种选育、田间管理措施与组织培养技术等方面,对近年来药用植物丹参的品种培育与繁殖现状展开综述,为实现丹参的规范化种植,提高中药材产量和药用成分含量提供技术依据,对进一步推动丹参植物资源开发的现代化进程提供借鉴。%Salvia miltiorrhiza Bge.is commonly used in the treatment of cardiovascular diseases as a traditional Chinese medicine .The yield and quality of medicinal materials declined greatly for long-term variety degeneration because of variety breeding .Large of researches reported constantly about cultivation and breeding technology of Salvia miltiorrhiza to improve the quality ,output and effective composition content of Salvia miltiorrhiza and en-hance the clinical efficacy .Advances on cultivation and breeding technology of Salvia miltiorrhiza,such as variety breeding ,field cultivation and tissue culture technology of medicinal plants in recent years are summarized in or -der to provide technical basis for standardized cultivation ,high output and effective composition content of Salvia miltiorrhiza,and promote the development modernization process of Salvia miltiorrhiza.

  3. Plant breeding by using radiation mutation - Development of disease tolerant lines of hotpepper by using radiation and interspecific hybridization

    Energy Technology Data Exchange (ETDEWEB)

    Lee, Yong Su; Song, Hi Sup; Kim, Jin Kyu; Shin, In Chul [Nongwoo Seed Co., Suwon (Korea)

    2000-04-01

    To obtain disease resistant mutant lines, 6 inbred lines were hotppepers were irradiated with 250Gy of gamma ray and crossed between cultivar and wild species. 1) 4500 M{sub 1} plants were cultivated for obtaining M{sub 2} seed in 6 inbred lines of hotpeppers irradiated with 250 Gy of gamma ray. 2) Crossability was not generally existed among interspecific crosses, crossability between C. annum and C. chacoense was successful except crosses between C. annum, C. pubescens and C. eximium. 3) The embryo disected 45 days after pollination was suitable for embryo culture. 4) Hybrid plants were obtained from the embryo culture of the combination between C. annum and C. chacoense, while abnormal hybrid plants occurred from the combination between C. annum and C. baccatum. 15 refs., 4 figs., 4 tabs. (Author)

  4. Reproductive resource partitioning in two sympatric Goniothalamus species (Annonaceae) from Borneo: floral biology, pollinator trapping and plant breeding system

    Science.gov (United States)

    Lau, Jenny Y. Y.; Pang, Chun-Chiu; Ramsden, Lawrence; Saunders, Richard M. K.

    2016-01-01

    The floral phenology, pollination ecology and breeding systems of two sympatric early-divergent angiosperms, Goniothalamus tapisoides and G. suaveolens (Annonaceae) are compared. The flowers are protogynous and morphologically similar, with anthesis over 23–25 h. Both species are predominantly xenogamous and pollinated by small beetles: G. tapisoides mainly by Curculionidae and G. suaveolens mainly by Nitidulidae. Coevolution and reproductive resource partitioning, reducing interspecific pollen transfer, is achieved by temporal isolation, due to contrasting floral phenologies; and ethological isolation, due to contrasting floral scents that contain attractants specific to the two beetle families. Analysis of floral scents revealed three volatiles (3-methylbutyl acetate, ethyl hexanoate and 2-phenylethanol) that are known to be nitidulid attractants in the floral scent of G. suaveolens, but absent from that of G. tapisoides. An effective pollinator trapping mechanism is demonstrated for both species, representing the first such report for the family. Trapping is achieved by the compression of the outer petals against the apertures between the inner petals. This trapping mechanism is likely to be a key evolutionary innovation for Goniothalamus, increasing pollination efficiency by increasing pollen loading on beetles during the staminate phase, promoting effective interfloral pollinator movements, and increasing seed-set by enabling rapid turn-over of flowers. PMID:27767040

  5. Effects of climate change on plant-insect interactions and prospects for resistance breeding using genetic resources

    NARCIS (Netherlands)

    Pritchard, J.; Broekgaarden, C.; Vosman, B.

    2014-01-01

    This chapter describes the components (elevated CO2, temperature and drought) of climate change and their direct and indirect effects on plant-insect interactions. The genetic resources (such as wild relatives and traditional, locally adapted landraces) important for increasing pest/disease resistan

  6. An express route to perfection: Ornamental plant breeders have the tools at their disposal to expedite breeding for specific traits

    Science.gov (United States)

    Plants inherit traits the same way Gregor Mendel observed in his famous experiments with peas in the 1800s. Breeders select parents with one or more desirable traits and then look for superior combinations of these traits in their offspring. Seedlings must be rigorously evaluated for the desirable...

  7. Effects of climate change on plant-insect interactions and prospects for resistance breeding using genetic resources

    NARCIS (Netherlands)

    Pritchard, J.; Broekgaarden, C.; Vosman, B.

    2014-01-01

    This chapter describes the components (elevated CO2, temperature and drought) of climate change and their direct and indirect effects on plant-insect interactions. The genetic resources (such as wild relatives and traditional, locally adapted landraces) important for increasing pest/disease

  8. 50 CFR 15.24 - Permits for cooperative breeding.

    Science.gov (United States)

    2010-10-01

    ... 50 Wildlife and Fisheries 1 2010-10-01 2010-10-01 false Permits for cooperative breeding. 15.24... PLANTS WILD BIRD CONSERVATION ACT Permits and Approval of Cooperative Breeding Programs § 15.24 Permits for cooperative breeding. (a) Application requirements for permits for cooperative breeding....

  9. Determination of optimal doses of radiation for the plant breeding of pseudo cereals; Determinacion de dosis optimas de radiacion para el mejoramiento de seudocereales

    Energy Technology Data Exchange (ETDEWEB)

    Gonzalez J, J. [ININ, 52045 Ocoyoacac, Estado de Mexico (Mexico); Gomez P, L. [Universidad Nacional Agraria La Molina, Lima (Peru)]. e-mail: jgj@nuclear.inin.mx

    2005-07-01

    With the purpose of promoting the use of the radiations for the plant breeding of pseudo cereals, it was determined a simple and economic method that allows the quick selection of radiation dose that induce in the vegetable organisms the changes wanted. For it it was work with quinua seeds (Chenopodium quinoa Willd.) an Andean pseudo cereal that, due to their nutritious and physiologic characteristics it is considered by the FAO like one of the foods of the future and for the NASA like an organism that is good to remove the carbon dioxide from the atmosphere and at the same time, to generate food, oxygen and water for the crew during the space missions of long duration and that it has already improved by means of the radiation application. The proposed method consists on the evaluation, of the embryonic structures (radicule, hypocotyl and cotyledons) in the irradiated seeds as well as of the development of root, primary shaft and true leaves in the plants. The changes in the growth, form, number and color of the structures as well as the time of appearance of each one, allow to predict the morphological changes and inclusive some physiologic ones that will have the mature organisms, so that in only three weeks it is possible to select the doses more appropriate. (Author)

  10. Potato breeding in the Netherlands: a successful participatory model with collaboration between farmers and commercial breeders

    NARCIS (Netherlands)

    Almekinders, C.J.M.; Mertens, L.; Loon, van J.P.; Lammerts Van Bueren, E.

    2014-01-01

    Participatory Plant Breeding (PPB) is mostly considered relevant to smallholder agriculture in developing countries. PPB involves getting farmers to participate in plant breeding to overcome shortcomings in the formal plant breeding system. The potato breeding system in the Netherlands has a long st

  11. Potato breeding in the Netherlands: a successful participatory model with collaboration between farmers and commercial breeders

    NARCIS (Netherlands)

    Almekinders, C.J.M.; Mertens, L.; Loon, van J.P.; Lammerts Van Bueren, E.

    2014-01-01

    Participatory Plant Breeding (PPB) is mostly considered relevant to smallholder agriculture in developing countries. PPB involves getting farmers to participate in plant breeding to overcome shortcomings in the formal plant breeding system. The potato breeding system in the Netherlands has a long

  12. Plant breeding and in situ utilization of palm trees Melhoramento genético e utilização in situ de palmeiras

    Directory of Open Access Journals (Sweden)

    Mercedes Rivas

    2012-02-01

    Full Text Available The palm tree family (Arecaceae is constituted by approximately 3000 species mainly distributed in the tropics and subtropics. As a source of a variety of products they contribute to the world and local economies, and also to peoples lifestyles. Historically their use has been based on wild populations, but also on local domestication. Very few species are subject of plant breeding programs and are cultivated in the world. This is the case of the African oil palm (Elaeis guineensis, in which investment and development consortiums invest high sums. Another kind of crop is the date palm (Phoenix dactylifera, which was domesticated thousand of years ago and whose success is based in the export of a fine product with worldwide recognition. In this case the production is based on traditional varieties and has very incipient breeding programs. A third group of palms includes those species from which products are obtained and manufactured for local development. The objective of this literature review is to contribute in the analysis of opportunities and weaknesses to investing in domestication and plant breeding programs in those palm trees with a recognized productive value.A família das palmeiras (Arecaceae é constituída por aproximadamente 3000 espécies, distribuídas principalmente nos trópicos e subtrópicos. Como fonte de uma variedade de produtos, contribuem para a economia mundial e local, e também para o modo de vida de várias pessoas. Historicamente, seu uso tem sido baseado em populações silvestres, mas também em domesticações locais. Muito poucas espécies estão submetidas a programas de melhoramento genético e são cultivadas a nível mundial. Este é o caso da palmeira de dendê (Elaeis guineensis, na qual consórcios de investimento e desenvolvimento investem altas quantias de dinheiro. Outro tipo de palmeira cultivada é a tamareira (Phoenix dactylifera, a qual foi domesticada milhares de anos atrás e cujo sucesso est

  13. Genomics-assisted breeding in fruit trees.

    Science.gov (United States)

    Iwata, Hiroyoshi; Minamikawa, Mai F; Kajiya-Kanegae, Hiromi; Ishimori, Motoyuki; Hayashi, Takeshi

    2016-01-01

    Recent advancements in genomic analysis technologies have opened up new avenues to promote the efficiency of plant breeding. Novel genomics-based approaches for plant breeding and genetics research, such as genome-wide association studies (GWAS) and genomic selection (GS), are useful, especially in fruit tree breeding. The breeding of fruit trees is hindered by their long generation time, large plant size, long juvenile phase, and the necessity to wait for the physiological maturity of the plant to assess the marketable product (fruit). In this article, we describe the potential of genomics-assisted breeding, which uses these novel genomics-based approaches, to break through these barriers in conventional fruit tree breeding. We first introduce the molecular marker systems and whole-genome sequence data that are available for fruit tree breeding. Next we introduce the statistical methods for biparental linkage and quantitative trait locus (QTL) mapping as well as GWAS and GS. We then review QTL mapping, GWAS, and GS studies conducted on fruit trees. We also review novel technologies for rapid generation advancement. Finally, we note the future prospects of genomics-assisted fruit tree breeding and problems that need to be overcome in the breeding.

  14. Effect of Organic Potato Farming on Human and Environmental Health and Benefits from New Plant Breeding Techniques. Is It Only a Matter of Public Acceptance?

    Directory of Open Access Journals (Sweden)

    Daniela Pacifico

    2016-10-01

    Full Text Available Organic farming practices are commonly thought to reduce the environmental impact of agriculture and to preserve the naturalness of the products. Herein, we report the effect of crop management practices on nutritional and toxicological value of potato tubers. Comparative studies are often controversial and the results are dependent on genotype and methodological approach. Targeted analysis and “omics” strategies are discussed, pointing at the nutritional aspects and the corresponding biological and molecular processes involved. Organic farming supporters still do not accept the use of genetic modification to produce new varieties suited for organic agriculture and crop improvement by genetic engineering still sparks hot debate among various scientific and social factions whose major concern is the possible existence of unintended effects both on human and world health. In this context, the advent of “new plant breeding techniques” has reignited the discussion on genetic engineering and on the compatibility of the new technologies with an eco-friendly agriculture. Could cisgenic and genome-edited potatoes be new good options for organic agriculture? We discuss how these approaches can be used to address food security challenges and to overcome specific problems based on the biological characteristics of potato tubers, producing new varieties that can improve farmers’ profit with a lower impact on public opinion. However, political, ethical, and social fears will probably persist much longer, mainly in Italy, historically a fiercely anti-GM country with a European leadership in organic food production and export.

  15. Lily breeding research in the Netherlands

    NARCIS (Netherlands)

    Tuyl, van J.M.; Holsteijn, van H.M.C.

    1996-01-01

    At the Centre for Plant Breeding and Reproduction Research (CPRO-DLO) in Wageningen lily breeding research in the Netherlands is concentrated. To this end sources of germplasm (genetic material) are maintained in a lily species and cultivar collection. Research is done on long term storage of this c

  16. Three-year breeding cycle of rainbow trout (Oncorhynchus mykiss fed a plant-based diet, totally free of marine resources: consequences for reproduction, fatty acid composition and progeny survival.

    Directory of Open Access Journals (Sweden)

    Viviana Lazzarotto

    Full Text Available Terrestrial plant resources are increasingly used as substitutes for fish meal and fish oil in fish feed in order to reduce the reliance of aquaculture on marine fishery resources. Although many studies have been conducted to assess the effects of such nutritional transition, no whole breeding cycles of fish fed diets free from marine resources has been reported to date. We therefore studied the reproductive performance of trout after a complete cycle of breeding while consuming a diet totally devoid of marine ingredients and thus of n-3 long chain polyunsaturated fatty acids (n-3 LC-PUFAs that play a major role in the formation of ova. Two groups of female rainbow trout were fed from first feeding either a commercial diet (C, marine and plant ingredients, or a 100% plant-based diet (V, blend of plant proteins and vegetable oils. Livers, viscera, carcasses and ova were sampled at spawning and analyzed for lipids and fatty acids. Although the V-diet was devoid of n-3 LC-PUFAs, significant amounts of EPA and DHA were found in livers and ova, demonstrating efficient bioconversion of linolenic acid and selective orientation towards the ova. Some ova were fertilized to assess the reproductive performance and offspring survival. We observed for the first time that trout fed a 100% plant-based diet over a 3-year breeding cycle were able to produce ova and viable alevins, although the ova were smaller. The survival of offspring from V-fed females was lower (-22% at first spawning, but not at the second. Our study showed that, in addition to being able to grow on a plant-based diet, rainbow trout reared entirely on such a diet can successfully produce ova in which neo-synthesized n-3 LC-PUFAs are accumulated, leading to viable offspring. However, further adjustment of the feed formula is still needed to optimize reproductive performance.

  17. Breeding and Cytogenetics in the Genus Tulipa

    NARCIS (Netherlands)

    Marasek Ciolakowska, A.R.; Ramanna, M.S.; Arens, P.; Tuyl, van J.M.

    2012-01-01

    Tulip (Tulipa) is one of the most important ornamental bulbous plants, which has been cultivated for cut flower, potted plant, garden plant and for landscaping. Species from the different sections display complementary agronomic characteristics and breeding techniques are used to combine desired fea

  18. 50 CFR 15.26 - Approval of cooperative breeding programs.

    Science.gov (United States)

    2010-10-01

    ... 50 Wildlife and Fisheries 1 2010-10-01 2010-10-01 false Approval of cooperative breeding programs... WILDLIFE AND PLANTS WILD BIRD CONSERVATION ACT Permits and Approval of Cooperative Breeding Programs § 15.26 Approval of cooperative breeding programs. Upon receipt of a complete application, the...

  19. Translocações cromossômicas entre trigo e centeio: uma alternativa ao melhoramento Chromosomes translocations between wheat and rye: an alternative to plant breeding

    Directory of Open Access Journals (Sweden)

    Alice Casassola

    2011-08-01

    Full Text Available Translocações são rearranjos cromossômicos estruturais que envolvem segmentos cromossômicos de extensão variada pertencentes a cromossomos homólogos ou não homólogos. Tanto a ocorrência natural quanto a induzida de translocações tem possibilitado um avanço no melhoramento varietal, uma vez que esses segmentos translocados podem carregar genes de resistência a estresses bióticos e abióticos. O centeio é uma espécie da famíla Triticeae muito utilizada para transferência de genes para o trigo como, por exemplo, genes de resistência às ferrugens da folha e do colmo e também genes que favorecem o rendimento, tanto em quantidade como em qualidade de grãos. Assim, o objetivo deste artigo foi o de revisar as principais translocações envolvendo o trigo e o centeio, no qual se verificou, a partir dos dados analisados, que as translocações envolvendo os cromossomos 1 e 2 mostraram-se mais vantajosas para o rendimento de grãos em trigo e que as demais foram importantes, principalmente, na transferência de genes de resistência a estresses. Portanto, essa estratégia tem demonstrado efetividade na busca de novos genes que favorecem o cultivo de trigo e sua utilização vem crescendo grandemente nos últimos anos.Translocations are structural chromosomal rearrangements which involve segments with different length belonging to homologous or non homologous chromosomes. Either natural or induced occurrence of translocations have been enabled an improvement in the plant breeding, when these translocated segments carry resistance genes to biotic and abiotic stress. Rye is a grass largely used to transfer genes to wheat such as resistance genes to leaf rust, stem rust and genes that support the wheat yield, either in grain quantity or in quality. Thus, the aim of this paper was to review the main translocations involving wheat and rye, which demonstrated, from the data analyzed, that translocations involving chromosomes 1 and 2 were

  20. Diet of canvasbacks during breeding

    Science.gov (United States)

    Austin, J.E.; Serie, J.R.; Noyes, J.H.

    1990-01-01

    We examined diets of canvasbacks (Aythya valisineria) breeding in southwestern Manitoba during 1977-81. Percent volume of animal foods consumed did not differ between males and females nor among prenesting, rapid follicle growth, laying, incubation, and renesting periods in females (mean = 50.1%). Tubers and shoots of fennelleaf pondweed (Potamogeton pectinatus) and midge larvae (Chironomidae) were the predominant foods, comprising on average 45% and 23% of the diet volume, respectively. Continued importance of plant foods to canvasbacks throughout reproduction contrasts with the mostly invertebrate diets of other prairie-breeding ducks, and does not fit current theories of nutritional ecology of breeding anatids (i.e., females meet the protein requirements of reproduction by consuming a high proportion of animal foods).

  1. Radiation mutation breeding

    Energy Technology Data Exchange (ETDEWEB)

    Song, Hi Sup; Kim, Jae Sung; Kim, Jin Kyu; Shin, In Chul; Lim, Young Taek

    1998-04-01

    In order to develop an advanced technical knowledge for the selection of better mutants, some of the crops were irradiated and the mutation rate, the survival rate and the method for selction of a mutant were studied. Furthermore, this study aimed to obtain basic data applicable to the development of genetic resources by evaluation and analysis the specific character for selection of the superior mutant and its plant breeding. 1. selection of the mutant with a superior resistance against environment in the principal crops 1) New varieties of mutant rices such as Wonpyeongbyeo, Wongwangbyeo, Winmibyeo, and heogseon chalbeyeo (sticky forma) were registered in the national variety list and made an application to crop variety protection right. They are under review now. 2) We also keep on studying on the number of a grain of 8 lines of excellent mutant rice for the purpose of improvement of breeding . 3) We selected 3 lines which have a resistance to pod and stem blight in large soybean, 31 lines with small grain size and higher yield, 112 lines of soybean of cooking, 7 lines of low lipoxygenase content, and 12 lines with decreased phytic acid content by 20 % compared to the previous level. 2. Selection of advanced Mugunwha (Rose of Sharon) mutant 1) Bagseul, a new variety of mutant, was developed and 30 plantlets of it are being proliferated. 2) Fifty-three lines of a mutant having a various morphologies were selected.

  2. Cisgenesis, a new tool for traditional plant breeding, should be exempted from the regulation on genetically modified organisms in a step by step approach

    NARCIS (Netherlands)

    Jacobsen, E.; Schouten, H.J.

    2008-01-01

    Modern potato breeding requires over 100,000 seedlings per new variety. Main reasons are (1) the increasing number of traits that have to be combined in this tetraploid vegetatively propagated crop, and (2) an increasing number of traits (e.g., resistance to biotic stress) originates from wild speci

  3. Biotechnology in maize breeding

    Directory of Open Access Journals (Sweden)

    Mladenović-Drinić Snežana

    2004-01-01

    Full Text Available Maize is one of the most important economic crops and the best studied and most tractable genetic system among monocots. The development of biotechnology has led to a great increase in our knowledge of maize genetics and understanding of the structure and behaviour of maize genomes. Conventional breeding practices can now be complemented by a number of new and powerful techniques. Some of these often referred to as molecular methods, enable scientists to see the layout of the entire genome of any organism and to select plants with preferred characteristics by "reading" at the molecular level, saving precious time and resources. DNA markers have provided valuable tools in various analyses ranging from phylogenetic analysis to the positional cloning of genes. Application of molecular markers for genetic studies of maize include: assessment of genetic variability and characterization of germ plasm, identification and fingerprinting of genotypes, estimation of genetic distance, detection of monogamic and quantitative trait loci, marker assisted selection, identification of sequence of useful candidate genes, etc. The development of high-density molecular maps which has been facilitated by PCR-based markers, have made the mapping and tagging of almost any trait possible and serve as bases for marker assisted selection. Sequencing of maize genomes would help to elucidate gene function, gene regulation and their expression. Modern biotechnology also includes an array of tools for introducing or deieting a particular gene or genes to produce plants with novel traits. Development of informatics and biotechnology are resulted in bioinformatic as well as in expansion of microarrey technique. Modern biotechnologies could complement and improve the efficiency of traditional selection and breeding techniques to enhance agricultural productivity.

  4. Tanqimeng,a Famous Scientist and Professor of Horticultural Plant Breeding%著名园艺植物育种学家谭其猛教授研究

    Institute of Scientific and Technical Information of China (English)

    邓继光

    2011-01-01

    Tanqimeng,born in Jiaxing County,Zhejiang province in 1914 and died in 1984,was a famous scientist of horticultural plant breeding,educationist of agriculture,the sole tutor of doctor candidates in the first domestic vegetable breeding subjects,founder of the Chinese vegetable breeding textbook piling,and once taught as associate professor in Fudan University and did as professor in Shenyang Agricultural College.After graduated from Zhejiang University's agronomy department in 1934,Professor Tan remained at the university as a teacher.Afterwards,he was invited by Wugengmin,a professor,to teach as assistant at the horticultural department of Northwest Agricultural and Forestry Training School and then part-time head of the school's horticultural farm.After the War of Resistance against Japan broke out,Professor Tan passed through many provinces,such as Zhejiang,Yunnan and Gansu,from then on devoting all his life to the science of vegetable genetic breeding.He firstly made the investigation into the breed resources and seed selections,disseminating 19 fine breeds of seven kinds of vegetables and crossbreeding four distinctive tomato breeds.In his research on the Chinese cabbage crossbreeding Professor Tan first discovered the Chinese cabbage inbred late in the system and male sterile lines,thus cultivating a large number of fine combinations of different Chinese cabbage breeds and disseminating them to thousands of hectares all over the country.In his research on the distant hybridization of vegetables of the mustard family and fruit trees,Professor Tan summarized many effective breeding methods.Meanwhile,Professor Tan developed a research on the law of genetic variation of relevant properties and made significant progress.%谭其猛(1914-1984),浙江嘉兴人,著名园艺植物育种学家和农业教育家,是国内首批蔬菜育种学科唯一的博士研究生导师,蔬菜育种学教材的奠基人,历任复旦大学副教授、沈阳农学院教授1

  5. SOYBEAN - MOLECULAR ASPECTS OF BREEDING

    Directory of Open Access Journals (Sweden)

    Aleksandra Sudarić

    2012-12-01

    Full Text Available The book Soybean: Molecular Aspects of Breeding focuses recent progress in our understanding of the genetics and molecular biology of soybean. This book is divided into four parts and contains 22 chapters. Part I, Molecular Biology and Biotechnology focuses advances in molecular biology and laboratory procedures that have been developed recently to manipulate DNA. Part II, Breeding for abiotic stress covers proteomics approaches form as a powerful tool for investigating the molecular mechanisms of the plant responses to various types of abiotic stresses. Part III, Breeding for biotic stress addresses issues related to application of molecular based strategies in order to increase soybean resistance to various biotic factors. Part IV, Recent Technology reviews recent technologies into the realm of soybean monitoring, processing and product use. While the information accumulated in this book is of primary interest for plant breeders, valuable insights are also offered to agronomists, molecular biologists, physiologists, plant pathologists, food scientists and students. The book is a result of efforts made by many experts from different countries (USA, Japan, Croatia, Serbia, China, Canada, Malawi, Iran, Hong Kong, Brasil, Mexico.

  6. 9 CFR 151.3 - Application for certificate of pure breeding.

    Science.gov (United States)

    2010-01-01

    ... breeding. 151.3 Section 151.3 Animals and Animal Products ANIMAL AND PLANT HEALTH INSPECTION SERVICE, DEPARTMENT OF AGRICULTURE ANIMAL BREEDS RECOGNITION OF BREEDS AND BOOKS OF RECORD OF PUREBRED ANIMALS Certification of Purebred Animals § 151.3 Application for certificate of pure breeding. An application for...

  7. 9 CFR 151.2 - Issuance of a certificate of pure breeding.

    Science.gov (United States)

    2010-01-01

    ... breeding. 151.2 Section 151.2 Animals and Animal Products ANIMAL AND PLANT HEALTH INSPECTION SERVICE, DEPARTMENT OF AGRICULTURE ANIMAL BREEDS RECOGNITION OF BREEDS AND BOOKS OF RECORD OF PUREBRED ANIMALS Certification of Purebred Animals § 151.2 Issuance of a certificate of pure breeding. The Administrator...

  8. 9 CFR 151.10 - Recognition of additional breeds and books of record.

    Science.gov (United States)

    2010-01-01

    ... books of record. 151.10 Section 151.10 Animals and Animal Products ANIMAL AND PLANT HEALTH INSPECTION SERVICE, DEPARTMENT OF AGRICULTURE ANIMAL BREEDS RECOGNITION OF BREEDS AND BOOKS OF RECORD OF PUREBRED ANIMALS Recognition of Breeds and Books of Record § 151.10 Recognition of additional breeds and books...

  9. Influence of Continuous Drought on Nectar Secreting of Nectar Plant and Optimization of Bee Breeding Technology%持续干旱对蜜源植物泌蜜的影响及养蜂技术优化研究

    Institute of Scientific and Technical Information of China (English)

    余玉生; 张学文; 卢焕仙; 张祖芸; 赵洪木; 夏培康

    2013-01-01

    In order to understand the influence of three years continuous drought on flowering and nectar secreting of nectar plant, corresponding bee breeding technologies were adopted to improve economic benefits of beekeeping.From July 2009 to June 2012, a tracking survey was conducted to six kinds of nectar plant (common vetch, pomegranates, lobular eucalyptus, wild ageratum, loquat and Elsholtzia rugulosa Hemsl), and then the situations of flowering and nectar secreting of each nectar plant during three years were compared.According to the comparison results, corresponding breeding technologies for bee were chosen.The results showed that flowering and nectar secreting of major nectar plants were influenced greatly by continuous drought, but complementary nectar plants secreted nectar relatively good for suitable temperature and no heavy rain and wind.Therefore, if adopting corresponding breeding technologies in continuous drought years, it also can obtain a good economic benefit.%为了了解云南省持续3年干旱对蜜源植物开花流蜜的影响,采取相应的蜜蜂饲养技术提高养蜂经济效益.2009年7月~2012年6月对苕子、石榴、小叶桉树、野藿香、枇杷、野坝子6种蜜源植物进行跟踪调查,对比每一种蜜源植物3年开花流蜜情况,并对蜜蜂采取相应的饲养管理技术.结果表明:主要蜜源植物开花泌蜜受到很大的影响,辅助蜜源植物反而因温度适合,没有大雨或大风的影响而流蜜相对较好.这说明在持续干旱年份只要采取相应的饲养技术,即可获得很好的经济效益.

  10. Primay Report on the Breeding and Selection of Several New Annanl and Biennial Ornamental Plants%一、二年生草花新品种的选育初报

    Institute of Scientific and Technical Information of China (English)

    唐小敏; 齐鸣

    2001-01-01

    通过引进国外的原始材料和国内优良的地方品种,对一串红(属)、硫华菊等几种传统的重要花卉用多代单株选择法和集团混合选择法进行选育,选育出 12类 22个优秀的株系;此外,还对鬼针草、南荠菜等 5个新种花卉进行选育,选育出了性状表现良好的 6个株系。所优选的品种(株系)经品种栽培试验证明具有较高的观赏价值,可以推广应用。%Through introuducing foreign original materal and domestic excellent local varieties, to select and breed to Salvia, Cosmos and other several traditional important plants in multi- generation single plants selection and group mixture selection ways. Get 12 sorts and 22 excellent clones. In the same time, to select and breed to Thymophylla, Arabis and other new varicties, selected 6 clones. All these clones are worth popularizing widespread.

  11. Tritium management and anti-permeation strategies for three different breeding blanket options foreseen for the European Power Plant Physics and Technology Demonstration reactor study

    Energy Technology Data Exchange (ETDEWEB)

    Demange, D., E-mail: david.demange@kit.edu [Karlsruhe Institute of Technology, Institute for Technical Physics, Tritium Laboratory Karlsruhe, Herrmann-von-Helmholtz-Platz 1, D-76344 Eggenstein-Leopoldshafen (Germany); Boccaccini, L.V.; Franza, F. [Karlsruhe Institute of Technology, Institute for Neutron Physics and Reactor Technology, Herrmann-von-Helmholtz-Platz 1, D-76344 Eggenstein-Leopoldshafen (Germany); Santucci, A.; Tosti, S. [Associazione ENEA-Euratom sulla Fusione, C.R. ENEA Frascati, Via E. Fermi 45, 00044 Frascati (RM) (Italy); Wagner, R. [Karlsruhe Institute of Technology, Institute for Technical Physics, Tritium Laboratory Karlsruhe, Herrmann-von-Helmholtz-Platz 1, D-76344 Eggenstein-Leopoldshafen (Germany)

    2014-10-15

    In DT fusion reactors like DEMO, the commonly accepted tritium (T) losses through the steam generator (SG) shall not exceed about 2 mg/d that are more than 5 orders of magnitude lower than the T production rate of about 360 g/d in the breeding blanket (BB). A very effective mitigation strategy is required balancing the size and efficiency of the processes in the breeding and cooling loops, and the availability and efficiency of anti-permeation barriers. A numerical study is presented using the T permeation code FUS-TPC that computes all T flows and inventories considering the design and operation of the BB, the SG, and the T systems. Many scenarios are numerically analyzed for three breeding blankets concepts – helium cooled pebbles bed (HCPB), helium cooled lithium lead (HCLL), and water cooled lithium lead (WCLL) – varying the T processes throughput and efficiency, and the permeation regimes through the BB and SG to be either surface-limited or diffusion-limited with possible permeation reduction factor. For each BB concept, we discuss workable operation scenarios and suggest specific anti-permeation strategies.

  12. Maize sugary enhancer1 (se1) is a presence-absence variant of a previously uncharacterized gene and development of educational videos to raise the profile of plant breeding and improve curricula

    Science.gov (United States)

    Haro von Mogel, Karl J.

    Carbohydrate metabolism is a biologically, economically, and culturally important process in crop plants. Humans have selected many crop species such as maize (Zea mays L.) in ways that have resulted in changes to carbohydrate metabolic pathways, and understanding the underlying genetics of this pathway is therefore exceedingly important. A previously uncharacterized starch metabolic pathway mutant, sugary enhancer1 (se1), is a recessive modifier of sugary1 (su1) sweet corn that increases the sugar content while maintaining an appealing creamy texture. This allele has been incorporated into many sweet corn varieties since its discovery in the 1970s, however, testing for the presence of this allele has been difficult. A genetic stock was developed that allowed the presence of se1 to be visually scored in segregating ears, which were used to genetically map se1 to the deletion of a single gene model located on the distal end of the long arm of chromosome 2. An analysis of homology found that this gene is specific to monocots, and the gene is expressed in the endosperm and developing leaf. The se1 allele increased water soluble polysaccharide (WSP) and decreased amylopectin in maize endosperm, but there was no overall effect on starch content in mature leaves due to se1. This discovery will lead to a greater understanding of starch metabolism, and the marker developed will assist in breeding. There is a present need for increased training for plant breeders to meet the growing needs of the human population. To raise the profile of plant breeding among young students, a series of videos called Fields of Study was developed. These feature interviews with plant breeders who talk about what they do as plant breeders and what they enjoy about their chosen profession. To help broaden the education of students in college biology courses, and assist with the training of plant breeders, a second video series, Pollination Methods was developed. Each video focuses on one or two

  13. Indigenous knowledge of animal breeding and breeds

    OpenAIRE

    I. Kohler-Rollefson

    2004-01-01

    Indigenous knowledge of animal breeding (IK-AB) includes concepts and practices used to influence the genetic composition of herds. Indigenous selection is often based on preferences based on physical characteristics, vigor, social and economic insurance. This issue paper summarizes the value of indigenous knowledge and local breeds to achieve agricultural sustainability. Links to IK-AB information are also provided. Available in SANREM office, ES

  14. Application of plant molecular breeding in improving cassava germplasm%植物分子育种技术在改良木薯种质方面的应用

    Institute of Scientific and Technical Information of China (English)

    黄强; 田益农; 黄惠芳; 彭靖茹; 侯学文

    2013-01-01

    木薯是热带、亚热带地区的重要粮食作物和经济作物.培育出生产性状更加优良的木薯品种,是推进木薯产业更快更好发展的重要基础.分子育种技术在培育优良木薯品种方面具有传统育种技术不可比拟的优势.该文介绍了近年来在提高植物抗寒性与病虫害抗性、降低氰苷含量、提高淀粉含量及组成、改变储存物种类、防止木薯收获后变质等方面的研究进展,以便在这些研究进展的基础上,利用植物分子育种技术加快获得具有抗逆能力提高、品质改良、产量增加、耐储藏等优良特性的木薯新品种.%Cassava (Manihot esculenta) is an important food and economic crop in tropical and subtropical areas. Breeding elite cassava cultivars is the most important foundation of cassava industry. Plant molecular breeding has obvious advantages compared to the traditional breeding. The advances in application of molecular approaches to improve cold tolerance,pest, pathogen and herbicide resistance, reduce cyanogens level, improve starch content, change storage composition,and alleviate post-harvest physiological deterioration (PPD) in cassava were discussed to promote the cultivation of elite cassava cultivars with stress-resistant increased, quality, production and storage tolerance improved characteristics.

  15. Genomic dairy cattle breeding

    DEFF Research Database (Denmark)

    Mark, Thomas; Sandøe, Peter

    2010-01-01

    The aim of this paper is to discuss the potential consequences of modern dairy cattle breeding for the welfare of dairy cows. The paper focuses on so-called genomic selection, which deploys thousands of genetic markers to estimate breeding values. The discussion should help to structure...... the thoughts of breeders and other stakeholders on how to best make use of genomic breeding in the future. Intensive breeding has played a major role in securing dramatic increases in milk yield since the Second World War. Until recently, the main focus in dairy cattle breeding was on production traits......, unfavourable genetic trends for metabolic, reproductive, claw and leg diseases indicate that these attempts have been insufficient. Today, novel genome-wide sequencing techniques are revolutionising dairy cattle breeding; these enable genetic changes to occur at least twice as rapidly as previously. While...

  16. Genomic dairy cattle breeding

    DEFF Research Database (Denmark)

    Mark, Thomas; Sandøe, Peter

    2010-01-01

    The aim of this paper is to discuss the potential consequences of modern dairy cattle breeding for the welfare of dairy cows. The paper focuses on so-called genomic selection, which deploys thousands of genetic markers to estimate breeding values. The discussion should help to structure...... the thoughts of breeders and other stakeholders on how to best make use of genomic breeding in the future. Intensive breeding has played a major role in securing dramatic increases in milk yield since the Second World War. Until recently, the main focus in dairy cattle breeding was on production traits......, unfavourable genetic trends for metabolic, reproductive, claw and leg diseases indicate that these attempts have been insufficient. Today, novel genome-wide sequencing techniques are revolutionising dairy cattle breeding; these enable genetic changes to occur at least twice as rapidly as previously. While...

  17. 场区绿化情况对种鹅产蛋性能的影响%Effect of Tree Planting in Factory Area on Laying Performance of Breeding Geese

    Institute of Scientific and Technical Information of China (English)

    黄炎坤; 崔锦; 王鑫磊; 姜东凤

    2012-01-01

    Through the comparison of effects of planting trees on breeding geese's laying performance in 4 breeding geese farms, it showed that the geese farm of better afforestation could provide cool living environment so that the laying period was prolonged and egg production increased (P0. 05). The result shows that the reduction of temperature is an effective action to prolong laying period and increase egg production.%通过对鹅舍前后和运动场内不同绿化情况的4个种鹅场鹅群产蛋性能的对比,发现绿化效果好的鹅场由于在春末和夏初能够为鹅群提供凉爽的生活环境,而使其产蛋期明显延长,而且产蛋数量也显著增加(P<0.05);但是,在春末和夏初种蛋的受精率和孵化率相对较低.在低温季节鹅场绿化情况对鹅群的产蛋量、种蛋受精率和孵化率没有显著影响(P>0.05).说明降低环境温度是延长鹅群产蛋期和提高产蛋量的有效措施.

  18. Phytoestrogens and avian reproduction: Exploring the evolution and function of phytoestrogens and possible role of plant compounds in the breeding ecology of wild birds.

    Science.gov (United States)

    Rochester, Johanna R; Millam, James R

    2009-11-01

    Phytoestrogens are secondary plant compounds, which can act to mimic estrogen and cause the disruption of estrogenic responses in organisms. Although there is a substantial body of research studying phytoestrogens, including their mechanisms of estrogenic effects, evolution, and detection in biological systems, little is known about their ecological significance. There is evidence, however, that an ecological relationship involving phytoestrogens exists between plants and animals-plants may produce phytoestrogens to reduce fecundity of organisms that eat them. Birds and other vertebrates may also exploit phytoestrogens to regulate their own reproduction-there are well known examples of phytoestrogens inhibiting reproduction in higher vertebrates, including birds. Also, common plant stressors (e.g., high temperature) increase the production of secondary plant compounds, and, as evidence suggests, also induce phytoestrogen biosynthesis. These observations are consistent with the single study ever done on phytoestrogens and reproduction in wild birds [Leopold, A.S., Erwin, M., Oh, J., Browning, B., 1976. Phytoestrogens adverse effects on reproduction in California quail. Science 191, 98-100.], which found that drought stress correlated with increased levels of phytoestrogens in plants, and that increased phytoestrogen levels correlated with decreased young. This review discusses the hypothesis that plants may have an effect on the reproduction of avian species by producing phytoestrogens as a plant defense against herbivory, and that birds may "use" changing levels of phytoestrogens in the vegetation to ensure that food resources will support potential young produced. Evidence from our laboratory and others appear to support this hypothesis.

  19. Research Progress in Caffeine Metabolism and Low Caffeine Content Germplasm Breeding of Tea Plants ( Camellia sinenesis (L.) O.Kuntze)%茶树咖啡碱代谢及低咖啡碱茶树育种研究进展

    Institute of Scientific and Technical Information of China (English)

    吴华玲; 陈栋; 李家贤

    2011-01-01

    Caffeine is one of the most important secondary metabolic products in tea plants (Camellia sinenesis (L.)0. Kuntze), which makes up 2-5% of the dry weight of fresh tea leaves broadly. Caffeine acts as a stimulant to nerves to get rid of fatigue, and to improve cardiovascular system. But high intake of caffeine can lead to adverse effects on human health. So, it is important to study the molecular mechanism of caffeine metabolism pathway in tea plants and to breed low caffeine content tea germplasm. In this study, the advances of research on tea caffeine were summarized from metabolic pathway and low caffeine content tea germplasm breeding. Finally, the problems and possible directions for these research areas were discussed.%咖啡碱是茶树中最重要的次生代谢产物之一,一般为茶叶干物质重的2%~5%.咖啡碱具有兴奋神经、祛除疲劳及增加心血管系统活动等保健功能,但摄入过高含量咖啡碱也会引起副作用,因此,研究茶树咖啡碱 代谢途径及其分子机理,培育低咖啡碱茶树品种具有非常重要的意义.本文综述了茶树咖啡碱的合成与分解代谢及其关键酶、以及近年来低咖啡碱茶树育种等方面的研究进展,并对这些研究领域目前存在的问题和今后努力的方向进行了讨论和展望.

  20. Implementation in breeding programmes

    NARCIS (Netherlands)

    Coffey, M.P.; McParland, S.; Bastin, C.; Wall, E.; Berry, D.P.; Veerkamp, R.F.

    2013-01-01

    Genetic improvement is easy when selecting for one heritable and well-recorded trait at a time. Many industrialised national dairy herds have overall breeding indices that incorporate a range of traits balanced by their known or estimated economic value. Future breeding goals will contain more non-p

  1. Implementation in breeding programmes

    NARCIS (Netherlands)

    Coffey, M.P.; McParland, S.; Bastin, C.; Wall, E.; Berry, D.P.; Veerkamp, R.F.

    2013-01-01

    Genetic improvement is easy when selecting for one heritable and well-recorded trait at a time. Many industrialised national dairy herds have overall breeding indices that incorporate a range of traits balanced by their known or estimated economic value. Future breeding goals will contain more non-p

  2. Changes in Knowledge Management Strategies Can Support Emerging Innovative Actors in Organic Agriculture: The Case of Participatory Plant Breeding in Europe

    Directory of Open Access Journals (Sweden)

    Livia Ortolani

    2017-02-01

    Full Text Available The “transfer of technology”, typical of a top-down linear process of innovation cannot be used in the new contexts of sustainability, characterised by uncertainty and complexity. There is a need to redefine categories and concepts around which innovation and agricultural policies are built, as those currently in use provide only a partial representation of reality. Innovation paradigms underpinning technological development and public policies design will have a direct impact on decisions regarding which agricultural models will ultimately be supported. Looking at local learning capacity and systems of relations can help to understand the potential to develop innovation within a specific context. This work contributes to the definition of new actors who are developing innovation for sustainability in rural areas. The study focuses on the knowledge systems of farmers who are applying alternative breeding strategies: it uses a network approach to explore the knowledge system in which individual farmers are embedded in order to understand their specific relational features. Three main conclusions emerge from the study: for enhancing the agro-ecological innovation paradigm there is a need to define the ‘innovation broker’, to revise the evaluation system of public research and to integrate innovation and agricultural policies.

  3. PRINCIPLES OF ANIMAL BREEDING

    Directory of Open Access Journals (Sweden)

    Sonja Jovanovac

    2014-06-01

    Full Text Available University textbook Principles of Animal Breeding is intended for students of agriculture and veterinary medicine. The material is the adapted curricula of undergraduate and graduate level studies in the framework of which the modules Principles of animal breeding as well as Basics of genetics and selection of animals attended are listened. The textbook contains 14 chapters and a glossary of terms. Its concept enables combining fundamental and modern knowledge in the breeding and selection of animals based on balanced and quality manner. The textbook material can be divided into several thematic sections. The first one relates to the classical notions of domestic animals breeding such as the history of breeding, domestication, breed, hereditary and non-hereditary variability and description of general and production traits. The second section focuses on the basic concepts in population and quantitative genetics, as well as biometrics. The third unit is dedicated to the principles of selection and domestic animals improving. The fourth unit relates to the current concepts and objectives of the molecular markers use in domestic animals selection and breeding. The above material has been submitted to the Croatian universities, but so far it has not been published as a textbook. The Ministry of Science, Education and Sports of Republic of Croatia approved financial support for the textbook publication.

  4. Birds - Breeding [ds60

    Data.gov (United States)

    California Department of Resources — This data set provides access to information gathered on annual breeding bird surveys in California using a map layer developed by the Department. This data layer...

  5. Waterfowl breeding population survey

    Data.gov (United States)

    US Fish and Wildlife Service, Department of the Interior — Waterfowl breeding population surveys have been completed annually on the Arctic Coastal Plain of Alaska since 1986. Methods for the 2011 Arctic Coastal Plain...

  6. Waterfowl breeding population survey

    Data.gov (United States)

    US Fish and Wildlife Service, Department of the Interior — Waterfowl breeding population surveys have been completed annually on the Arctic Coastal Plain of Alaska since 1986. Methods for the 2010 Arctic Coastal Plain...

  7. Garlic breeding system innovations

    NARCIS (Netherlands)

    Zheng, S.J.; Kamenetsky, R.; Féréol, L.; Barandiaran, X.; Rabinowitch, H.D.; Chovelon, V.; Kik, C.

    2007-01-01

    This review outlines innovative methods for garlic breeding improvement and discusses the techniques used to increase variation like mutagenesis and in vitro techniques, as well as the current developments in florogenesis, sexual hybridization, genetic transformation and mass propagation. Sexual ste

  8. PRINCIPLES OF ANIMAL BREEDING

    OpenAIRE

    2014-01-01

    University textbook Principles of Animal Breeding is intended for students of agriculture and veterinary medicine. The material is the adapted curricula of undergraduate and graduate level studies in the framework of which the modules Principles of animal breeding as well as Basics of genetics and selection of animals attended are listened. The textbook contains 14 chapters and a glossary of terms. Its concept enables combining fundamental and modern knowledge in the ...

  9. 50 CFR 15.23 - Permits for zoological breeding or display programs.

    Science.gov (United States)

    2010-10-01

    ... 50 Wildlife and Fisheries 1 2010-10-01 2010-10-01 false Permits for zoological breeding or display... OF WILDLIFE AND PLANTS WILD BIRD CONSERVATION ACT Permits and Approval of Cooperative Breeding Programs § 15.23 Permits for zoological breeding or display programs. (a) Application requirements...

  10. 50 CFR 15.42 - List of foreign qualifying breeding facilities. [Reserved

    Science.gov (United States)

    2010-10-01

    ... 50 Wildlife and Fisheries 1 2010-10-01 2010-10-01 false List of foreign qualifying breeding... OF WILDLIFE AND PLANTS WILD BIRD CONSERVATION ACT Qualifying Facilities Breeding Exotic Birds in Captivity § 15.42 List of foreign qualifying breeding facilities....

  11. Biotechnological approach in crop improvement by mutation breeding in Indonesia

    Energy Technology Data Exchange (ETDEWEB)

    Soeranto, H.; Sobrizal; Sutarto, Ismiyati; Manurung, Simon; Mastrizal [National Nuclear Energy Agency, Center for Research and Development of Isotope and Radiation Technology, Jakarta (Indonesia)

    2002-02-01

    Mutation breeding has become a proven method of improving crop varieties. Most research on plant mutation breeding in Indonesia is carried out at the Center for Research and Development of Isotope and Radiation Technology, National Nuclear Energy Agency (BATAN). Nowadays, a biotechnological approach has been incorporated in some mutation breeding researches in order to improve crop cultivars. This approach is simply based on cellular totipotency, or the ability to regenerate whole, flowering plants from isolated organs, pieces of tissue, individual cells, and protoplasts. Tissue culture technique has bee extensively used for micro propagation of disease-free plants. Other usage of this technique involves in various steps of the breeding process such as germplasm preservation, clonal propagation, and distant hybridization. Mutation breeding combined with tissue culture technique has made a significant contribution in inducing plant genetic variation, by improving selection technology, and by accelerating breeding time as for that by using anther or pollen culture. In Indonesia, research on mutation breeding combined with tissue culture techniques has been practiced in different crop species including rice, ginger, banana, sorghum etc. Specially in rice, a research on identification of DNA markers linked to blast disease resistance is now still progressing. A compiled report from some research activities is presented in this paper. (author)

  12. Developments in breeding cereals for organic agriculture

    DEFF Research Database (Denmark)

    Wolfe, M.S.; Baresel, J.P.; Desclaux, D.

    2008-01-01

    into the crop can be helped by diversification within the crop, allowing complementation and compensation among plants. Although the problems of breeding cereals for organic farming systems are large, there is encouraging progress. This lies in applications of ecology to organic crop production, innovations......The need for increased sustainability of performance in cereal varieties, particularly in organic agriculture (OA), is limited by the lack of varieties adapted to organic conditions. Here, the needs for breeding are reviewed in the context of three major marketing types, global, regional, local......, in European OA. Currently, the effort is determined, partly, by the outcomes from trials that compare varieties under OA and CA (conventional agriculture) conditions. The differences are sufficiently large and important to warrant an increase in appropriate breeding. The wide range of environments within OA...

  13. Broiler breeding : breeding goals, selection schemes and the usefulness of local breeds for China

    NARCIS (Netherlands)

    Jiang, X.

    1999-01-01

    This dissertation considers three aspects of broiler breeding: definition of breeding goals, selection schemes for specialized lines, and the usefulness of local breeds for China. Economic values in broiler breeding were derived based on a deterministic model. A systematic design for the application

  14. MARKER ASSISTED SELECTION IN DISEASE RESISTANCE BREEDING

    Directory of Open Access Journals (Sweden)

    Narasimhulu Ragimekula

    2013-08-01

    Full Text Available Feeding ever-increasing population is the main challenge faced by the agricultural scientists and to meet this plant breeders have to put continuous efforts to develop new crop varieties on fast track basis. DNA based polymorphism, commonly known as DNA markers can be used for genetic improvement through selection for favourable traits such as disease resistance. Molecular markers are becoming an essential component in backcross breeding programs for tracking the resistance genes in gene pyramiding. Marker assisted selection (MAS, is expected to increase genetic response by affecting efficiency and accuracy of selection. Even though marker-assisted selection now plays a prominent role in the field of plant breeding, examples of successful, practical outcomes are rare. MAS, with few exceptions, has not yet delivered its expected benefits in commercial breeding. It is clear that DNA markers hold great promise, but realizing that promise remains elusive. The economic and biological constraints such as a low return of investment in small-grain cereal breeding, lack of diagnostic markers, and the prevalence of QTL-background effects hinder the broad implementation of MAS. Until complex traits can be fully dissected, the application of MAS will be limited to genes of moderate-to-large effect and to applications that do not endanger the response to conventional selection. Till then, observable phenotype will remain an important component of genetic improvement programmes, because it takes in to account the collective effect of all genes. In future, chip-based, high-throughput genotyping platforms and the introduction of genomic selection will reduce the current problems of integrating MAS in practical breeding programs and open new avenues for a molecular-based resistance breeding.

  15. Studies on mutation breeding of hibiscus syriacuse

    Energy Technology Data Exchange (ETDEWEB)

    Song, Hee Sub; Kim, Jin Kyu; Lee, Ki Un; Lim, Yong Taek [Korea Atomic Energy Research Institute, Taejon (Korea, Republic of)

    1995-12-01

    Hibiscus has been known as a national flower of Korea. Hibiscus has ahch a characteristic of self-incompatibility that all the plants exist as natural hybrids and have heterogeneous genes. Thirth two domestic varieties were propagated. Radiosensitivity of H. syriacus irradiated with gamma ray was investigated in plant cuttings. The plant height was reduced by 45 percent in 5 kR irradiated group compared to control group. The radiation dose of 5 kR could be rrecommended for mutation breeding of Hibiscus cuttings. Promising mutant lines were selected form the varieties of Hwarang Wolsan 176, I1pyondansim and Emille. 6 tabs., 2 figs., 13 refs., 4 ills. (Author).

  16. Welfare in horse breeding

    DEFF Research Database (Denmark)

    Campbell, M.L.H.; Sandøe, Peter

    2015-01-01

    Welfare problems related to the way horses are bred, whether by coitus or by the application of artificial reproduction techniques (ARTs), have been given no discrete consideration within the academic literature. This paper reviews the existing knowledge base about welfare issues in horse breeding...... and identifies areas in which data is lacking. We suggest that all methods of horse breeding are associated with potential welfare problems, but also that the judicious use of ARTs can sometimes help to address those problems. We discuss how negative welfare effects could be identified and limited and how...

  17. Welfare in horse breeding

    DEFF Research Database (Denmark)

    Campbell, M.L.H.; Sandøe, Peter

    2015-01-01

    Welfare problems related to the way horses are bred, whether by coitus or by the application of artificial reproduction techniques (ARTs), have been given no discrete consideration within the academic literature. This paper reviews the existing knowledge base about welfare issues in horse breeding...... and identifies areas in which data is lacking. We suggest that all methods of horse breeding are associated with potential welfare problems, but also that the judicious use of ARTs can sometimes help to address those problems. We discuss how negative welfare effects could be identified and limited and how...

  18. Development of Circular Economy of Characteristic Breeding Industry in Guangxi

    Institute of Scientific and Technical Information of China (English)

    2012-01-01

    In order to achieve characteristic,high-quality,high-efficiency,low-consumption,healthy and intensive breeding,we use the ecology method to analyze the status quo of development of characteristic breeding industry in Guangxi,from advantages in resources,industrial development,characteristic breeding,and standardized construction.There are some problems existing in the development of characteristic breeding industry in Guangxi:prominent contradiction among human,land and grain;outdated breeding mode;low comprehensive utilization rate of resources;increasingly deteriorating ecological environment.We put forth the following recommendations:based on the ecological and economic principles,introducing"reduce,reuse,recycle"idea of circular economy;striving to choose the development pattern of circular economy adapting to local resource characteristics,planting and breeding habits;in terms of realization path,paying close attention to construction of standardized breeding farm,cultivation of organic fertilizer industry,infrastructure construction,environmental law enforcement,and other parts;reinforcing the policy guidance,adjusting and optimizing industrial structure,strengthening scientific and technological innovation,and advancing industrialization management,to promote steady development of circular economy of characteristic breeding industry in Guangxi,and accelerate the process of rejuvenating province by breeding industry,enriching the people and building up Guangxi.

  19. Análise bayesiana do modelo de herança monogênica no melhoramento vegetal: um exemplo com abobrinha Bayesian analisys of monogenic inheritance model in plant breeding: a case study with zucchini

    Directory of Open Access Journals (Sweden)

    Maria Imaculada de Sousa Silva

    2009-12-01

    Full Text Available Uma estratégia comum em programas de melhoramento é conduzir estudos básicos de herança para investigar a hipótese de controle do caráter por um ou poucos genes de efeito principal, associados ou não a genes modificadores de pequeno efeito. Neste trabalho, foi utilizada a inferência bayesiana para ajustar modelos de herança genética aditiva-dominante a experimentos de genética vegetal com várias gerações. Densidades normais com médias associadas aos efeitos genéticos das gerações foram consideradas em um modelo linear em que a matriz de delineamento dos efeitos genéticos tinha coeficientes indeterminados (precisando ser estimada para cada indivíduo. A metodologia foi ilustrada com um conjunto de dados de um estudo de herança da partenocarpia em abobrinha (Cucurbita pepo L. Tal ajuste permitiu explicitar a distribuição a posteriori das probabilidades genotípicas. . A análise corrobora resultados anteriores da literatura, porém foi mais eficiente que alternativas prévias que supunham a matriz de delineamento conhecida para as gerações. Conclui-se que a partenocarpia em abobrinha é governada por um gene principal com dominância parcial.A common breeding strategy is to carry out basic studies to investigate the hypothesis of a single gene controlling the trait (major gene with or without polygenes of minor effect. In this study we used Bayesian inference to fit genetic additive-dominance models of inheritance to plant breeding experiments with multiple generations. Normal densities with different means, according to the major gene genotype, were considered in a linear model in which the design matrix of the genetic effects had unknown coefficients (which were estimated in individual basis. An actual data set from an inheritance study of partenocarpy in zucchini (Cucurbita pepo L. was used for illustration. Model fitting included posterior probabilities for all individual genotypes. Analysis agrees with results in the

  20. Breeding for Grass Seed Yield

    DEFF Research Database (Denmark)

    Boelt, Birte; Studer, Bruno

    2010-01-01

    Seed yield is a trait of major interest for many fodder and amenity grass species and has received increasing attention since seed multiplication is economically relevant for novel grass cultivars to compete in the commercial market. Although seed yield is a complex trait and affected...... by agricultural practices as well as environmental factors, traits related to seed production reveal considerable genetic variation, prerequisite for improvement by direct or indirect selection. This chapter first reports on the biological and physiological basics of the grass reproduction system, then highlights...... important aspects and components affecting the seed yield potential and the agronomic and environmental aspects affecting the utilization and realization of the seed yield potential. Finally, it discusses the potential of plant breeding to sustainably improve total seed yield in fodder and amenity grasses....

  1. Breeding kennel management.

    Science.gov (United States)

    Mullen, S

    1992-09-01

    Veterinarians and dog breeders should work together to establish protocols for health care and breeding management that are based on sound scientific principles as well as practical systems. These protocols should involve bitches, stud dogs, and puppies. Tantamount importance must be placed on record keeping so that problems may be identified and solved before they are irreversible.

  2. Travelling to breed

    NARCIS (Netherlands)

    Drent, RJ; Fox, AD; Stahl, J

    2006-01-01

    Traditionally, investigation of the dynamics of avian migration has been heavily biased towards the autumn return trip to the wintering quarters. Since the migratory prelude to breeding has direct fitness consequences, the European Science Foundation recently redressed the balance and sponsored a wo

  3. Penguin breeding in Edinburgh

    NARCIS (Netherlands)

    Gillespie, T.H.; F.R.S.E.,; F.Z.S.,

    1939-01-01

    The Scottish National Zoological Park at Edinburgh has been notably successful in keeping and breeding penguins. It is happy in possessing as a friend and benefactor, Mr Theodore E. Salvesen, head of the firm of Christian Salvesen & Co., Leith, to whose interest and generosity it owes the great numb

  4. 基因组编辑技术在植物基因功能鉴定及作物育种中的应用%The application of genome editing in identification of plant gene function and crop breeding

    Institute of Scientific and Technical Information of China (English)

    周想春; 邢永忠

    2016-01-01

    Plant genome can be modifiedvia current biotechnology with high specificity and excellent efficiency. Zinc finger nucleases (ZFN), transcription activator-like effector nucleases (TALEN) and clustered regularly inter-spaced short palindromic repeats (CRISPR)/CRISPR-associated 9 (Cas9) system are the key engineered nucleases used in the genome editing. Genome editing techniques enable gene targeted mutagenesis, gene knock-out, gene in-sertion or replacement at the target sites during the endogenous DNA repair process, including non-homologous end joining (NHEJ) and homologous recombination (HR), triggered by the induction of DNA double-strand break (DSB).Genome editing has been successfully applied in the genome modification of diverse plant species, such asAra-bidopsis thaliana,Oryza sativa, andNicotiana tabacum. In this review, we summarize the application of genome editing in identification of plant gene function and crop breeding. Moreover, we also discuss the improving points of genome editing in crop precision genetic improvement for further study.%利用生物技术可以对植物基因组进行高效、精准、特异的修饰.锌指核酸酶(Zinc finger nucleases,ZFN)、转录激活样效应因子核酸酶(Transcription activator-like effector nucleases,TALEN)、成簇规律间隔短回文重复序列(Clustered regularly interspaced short palindromic repeats,CRISPR)/Cas9(CRISPR-associated 9)是目前基因组编辑技术应用中的关键工程核酸酶.通过产生DNA双链断裂(Double-strand breaks,DSBs)激活植物内源修复途径(包括非同源粘性末端连接和同源重组修复),基因组编辑技术可以实现对靶位点的定点突变、缺失或者基因的插入与替换.基因组编辑已经被广泛地应用到各种植物的基因组修饰中,如拟南芥、水稻、烟草等.本文主要概述了基因组编辑技术在植物基因功能鉴定及作物遗传育种中的应用,并对其未来在作物精准改良中需要完善的相关问题进行了探讨.

  5. 二年生柴胡优良品系的选育%Nuture of Excellent Breeds of the Biennial Plant Bup leurum chinese DC

    Institute of Scientific and Technical Information of China (English)

    张阳; 李敏; 亢学平; 卜宪娟; 金基万; 叶强

    2014-01-01

    对2年生柴胡9个性状:株高、分蘖数、茎粗和、须根数、分枝数、根长、叶型、叶面积和根重等的遗传参数和性状间的关系进行了研究。其中茎粗和、分枝数与决定药材产量的根重的相关系数分别为0.5209和0.4457,均达到显著水平;根重与决定药材质量的根长相关系数为0.4487,达到显著水平。不同叶型柴胡的叶面积与根重相关系数分别为宽叶型:1.012、长叶型:1.2021、竹叶型:3.1187,均达到极显著相关水平;并且每种叶型柴胡的叶宽、叶长与叶面积的相关系数也分别达到显著相关水平;说明在2年生柴胡的优良品系选育的过程中,可依据茎粗和、分枝数、根长、叶总表面积等性状来判断决定经济产量的根重。%The study aim to carry out the relationship between annual Bupleurum root ’s dry weight with genetic parameters and plant height ,tiller number ,stem diameter and root number ,branch number , root length ,leaf type ,leaf area .We measured and recorded the nine traits ,then calculated the correlation coefficient between each character with dry root weight ,which determine the yields .The coefficient of correlation between stem diameter and branch number with root weight were respectively 0 .5209 and 0 .4457 reached the significant level ;The correlation coefficient between root weight with root length was 0 .4487 also reached significant level .The latter determines the quality of drugs ;The correlation coeffi-cients of Leaf area and root’s weight as follows .The broad leaf type is 1 .012 ,long leaf type is 1 .2021 , and bamboo type is 3 .1187 ,all of them reached significant level ;Moreover ,the correlation coefficients between each type leaf’s length ,width with leaf area were also significant .This study result provide ref-erences for judging the biennial Bupleurum’s economic yields by measuring their diameters ,branch num-ber ,root length ,and leaf

  6. Breeding Potential in Danish Apple Cultivar

    DEFF Research Database (Denmark)

    Larsen, Bjarne

    understanding of the link between phenotypes and the underlying gene-tic background which is crucial in plant breeding. We found a considerable genetic diversity in the collection and no genetic structure. We exposed a high number of accessions in admix and revealed several putative cultivar parentages, never......The diversity in plant genetic resources is a prerequisite for genetic improvement of cultivated crop species. Lack of in-depth characterization and evaluation of gene bank accessions is a major obstacle for their potential utilization. The Danish apple (Malus domestica L.) gene bank collection...... be used directly for marker-assisted selection. In addition, we suggest a number of candidate genes involved in the control of several important fruit quality traits. Future studies and breeding attempts can therefore benefit from the results, including genetic fingerprints and pedigree reconstruction...

  7. CRISPR/Cas9系统在培育抗病毒植物新种质中的应用%Application of CRISPR/Cas9 system in breeding of new antiviral plant germplasm

    Institute of Scientific and Technical Information of China (English)

    张道微; 张超凡; 董芳; 黄艳岚; 张亚; 周虹

    2016-01-01

    summarized the advantages, main problems and development tendency of CRISPR/cas9 system in breeding of new antiviral plant germplasms.

  8. Studies on mutation breeding of hibiscus Syriacus

    Energy Technology Data Exchange (ETDEWEB)

    Song, Heui Sub; Lee, Ki Woon; Im, Yong Taek [Korea Atomic Energy Research Institute, Taejon (Korea, Republic of)

    1994-12-01

    Hibiscus(Hibiscus syracuse L.) has been know as a national flower of Korea science old times. Although there are some ancient records that the Hibiscus had been planted in large quantities in Korea, Japanese had dug out all the good plants of Hibiscus in this country during their colonial period. But Hibiscus has such a characteristics of self-incompatibility that all the plants exist as a hybrid naturally and have heterogeneous genes. Therefore many good characters can be taken out from the surviving plants. Many domestic 78 varieties of Hibiscus syracuse were collected and propagated 26 varieties cuttings. Radiosensitivity of gamma-ray irradiated Hibiscus syracuse were investigated the germination rate, survival rate, plant height was with the increase of 4 kR better than control. The radiation doses of 10-12 kR are recommended for mutation breeding of Hibiscus. 6 figs, 11 tabs, 41 refs. (Author).

  9. Network Candidate Genes in Breeding for Drought Tolerant Crops

    OpenAIRE

    Christoph Tim Krannich; Lisa Maletzki; Christina Kurowsky; Renate Horn

    2015-01-01

    Climate change leading to increased periods of low water availability as well as increasing demands for food in the coming years makes breeding for drought tolerant crops a high priority. Plants have developed diverse strategies and mechanisms to survive drought stress. However, most of these represent drought escape or avoidance strategies like early flowering or low stomatal conductance that are not applicable in breeding for crops with high yields under drought conditions. Even though a gr...

  10. One hundred years of statistical developments in animal breeding.

    Science.gov (United States)

    Gianola, Daniel; Rosa, Guilherme J M

    2015-01-01

    Statistical methodology has played a key role in scientific animal breeding. Approximately one hundred years of statistical developments in animal breeding are reviewed. Some of the scientific foundations of the field are discussed, and many milestones are examined from historical and critical perspectives. The review concludes with a discussion of some future challenges and opportunities arising from the massive amount of data generated by livestock, plant, and human genome projects.

  11. 基于繁殖粒子群算法的火电厂负荷优化分配%Optimal load dispatching based on breeding particle swarm optimization algorithm for thermoelectric power plant

    Institute of Scientific and Technical Information of China (English)

    李勇; 王建君; 曹丽华

    2012-01-01

    The concept of total optimal load dispatch time is proposed for the optimal load dispatch of power plant and its calculation formula is presented. The optimal load dispatch based on BPSO (Breeding Particle Swarm Optimization) algorithm is proposed,which combines the interbreeding of GA(Genetic Algorithm) with the standard PSO(Particle Swarm Optimization) algorithm and applies the adaptive inertial weight to avoid the local optimum of PSO and heavy calculation load of GA. Its application issues in optimal load dispatch is analyzed and treated to reduce the calculation time and improve the algorithm accuracy. Its effectiveness and on-site applicability are further verified by a case study, meanwhile, it can meet the needs of cost reduction for power plant and the demand of total time of optimal load dispatching for power network dispatching.%针对目前火电厂负荷优化分配的问题,提出了负荷优化分配总时间的概念,并给出了具体计算公式.在标准粒子群优化算法中引入遗传算法中的杂交思想,提出了基于繁殖粒子群优化算法的负荷优化分配方法,并引入自适应惯性权重对算法进行了改进,避免了标准粒子群算法易陷入局部最优及遗传算法优化计算时间长的缺点.对算法应用在负荷优化分配中的具体问题进行了分析处理,缩短了优化计算时间,提高了算法精度.实例分析进一步验证了所提方法的有效性以及现场实用性,能够同时满足火电厂对降低成本及电网调度对负荷优化分配总时间的硬性要求.

  12. Applied Genetics and Genomics in Alfalfa Breeding

    Directory of Open Access Journals (Sweden)

    E. Charles Brummer

    2012-03-01

    Full Text Available Alfalfa (Medicago sativa L., a perennial and outcrossing species, is a widely planted forage legume for hay, pasture and silage throughout the world. Currently, alfalfa breeding relies on recurrent phenotypic selection, but alternatives incorporating molecular marker assisted breeding could enhance genetic gain per unit time and per unit cost, and accelerate alfalfa improvement. Many major quantitative trait loci (QTL related to agronomic traits have been identified by family-based QTL mapping, but in relatively large genomic regions. Candidate genes elucidated from model species have helped to identify some potential causal loci in alfalfa mapping and breeding population for specific traits. Recently, high throughput sequencing technologies, coupled with advanced bioinformatics tools, have been used to identify large numbers of single nucleotide polymorphisms (SNP in alfalfa, which are being developed into markers. These markers will facilitate fine mapping of quantitative traits and genome wide association mapping of agronomic traits and further advanced breeding strategies for alfalfa, such as marker-assisted selection and genomic selection. Based on ideas from the literature, we suggest several ways to improve selection in alfalfa including (1 diversity selection and paternity testing, (2 introgression of QTL and (3 genomic selection.

  13. Plant breeding by using radiation mutation

    Energy Technology Data Exchange (ETDEWEB)

    Lee, Young Il; Song, Hi Sup; Kim, Jin Kyu; Shin, In Chul; Lee, Sang Jae; Lim, Yong Tack; Lee, In Suk; Kim, Dong Sub; Lee, Yong Su; Yang, Seung Gyun; Choi, Soon Ho; Sim, Dong Bo; Kim, Bong Kyu; Lee, Jang Ha [and others

    2000-04-01

    To improve the crop varieties by using variation, various mutant lines were selected from the materials irradiated with gamma ray due to in vivo and in vitro mutagenesis. The selected mutant lines were evaluated in the agronomic characteristics by field observation and analysis of related DNA patterns in laboratory. the results are summarized as follow; 1. Registered new mutant varieties such as Wonpyeongbyeo, Wonkwangbyeo, Wonmibyeo and Heogseonchalbyeo in the national variety list. 2. Advanced 800 mutant lines of rice soybean perilla and sweet potatoes were selected for radiation genetic resources. 3. Promising rice mutants were evaluated in several district regions for releasing. 4. Bagseul, a new mutant variety of Mugungwha (Hibiscus) were developed. 5. Promising soybean mutant lines were selected for improvement of soybean disease resistant, and soybean seed quality. 6. NaCl resistant cell lines were selected in in vitro and analysed the DNA banks. 7. 5-MT and Cysteine resistant cell lines were obtained from in vitro mutagenesis for improvement of rice quality. 8. Other related researches were carried out with coordinated projects. (author)

  14. Beyond breeding area management

    DEFF Research Database (Denmark)

    Pedersen, Lykke; Thorup, Kasper; Tøttrup, Anders P.

    Every year, billions of songbirds migrate thousands of kilometres between their European breeding grounds and African overwintering area. As migratory birds are dependent on resources at a number of sites varying in both space and time, they are likely to be more vulnerable to environmental change...... technological advances are currently enabling us to track yet smaller songbirds throughout their migration cycle providing valuable insight into the life cycle of individual birds. However, direct tracking of migratory birds has so far mainly been conducted on single populations and our understanding of entire...... and provide important information for conservation management of migratory birds....

  15. Breeding tropical forages

    Directory of Open Access Journals (Sweden)

    L Jank

    2011-01-01

    Full Text Available Brazil has the largest commercial beef cattle herd and is the main beef exporter in the world. Cultivated pastures arethe basis for the Brazilian beef production, and occupy an area of 101.4 million hectares. However, very few forage cultivars arecommercially available, and the majority of these are of apomictic reproduction, thus genetically homogeneous. Tropical foragebreeding is at its infancy, but much investment and efforts have been applied in the last three decades and some new cultivars havebeen released. In this paper, origin of different species, modes of reproduction, breeding programs and targets are discussed andthe resulting new cultivars released are presented.

  16. Designs and model effects definitions in the initial stage of a plant breeding program Delineamentos e definições de efeitos no modelo em estágios iniciais de melhoramento vegetal

    Directory of Open Access Journals (Sweden)

    Emanuel Fernando Maia de Souza

    2006-03-01

    Full Text Available The objective of this work was to compare the relative efficiency of initial selection and genetic parameter estimation, using augmented blocks design (ABD, augmented blocks twice replicated design (DABD and group of randomised block design experiments with common treatments (ERBCT, by simulations, considering fixed effect model and mixed model with regular treatment effects as random. For the simulations, eight different conditions (scenarios were considered. From the 600 simulations in each scenario, the mean percentage selection coincidence, the Pearsons´s correlation estimates between adjusted means for the fixed effects model, and the heritability estimates for the mixed model were evaluated. DABD and ERBCT were very similar in their comparisons and slightly superior to ABD. Considering the initial stages of selection in a plant breeding program, ABD is a good alternative for selecting superior genotypes, although none of the designs had been effective to estimate heritability in all the different scenarios evaluated.O objetivo deste trabalho foi comparar a eficiência relativa da seleção inicial e a estimação de parâmetros genéticos, empregando delineamento em blocos aumentados (DBA, delineamento em blocos aumentados com duas repetições (DBAD e grupo de experimentos em blocos casualizados com tratamentos comuns (EBCTC, por meio de simulações, considerando o modelo com efeitos fixos e o modelo misto, com tratamentos regulares aleatórios. Trabalhou-se com oito diferentes condições (cenários com 600 simulações de cada. Foram avaliadas a porcentagem média de coincidência, a estimativa da correlação de Pearson entre as médias ajustadas para o modelo de efeitos fixos e a estimativa da herdabilidade para o modelo misto. O DBAD e o EBCTC foram bastante similares em suas comparações e pouco melhores que o DBA. Considerando os estágios iniciais de seleção em um programa de melhoramento de plantas, o DBA é uma alternativa

  17. Root phenotyping: from component trait in the lab to breeding.

    Science.gov (United States)

    Kuijken, René C P; van Eeuwijk, Fred A; Marcelis, Leo F M; Bouwmeester, Harro J

    2015-09-01

    In the last decade cheaper and faster sequencing methods have resulted in an enormous increase in genomic data. High throughput genotyping, genotyping by sequencing and genomic breeding are becoming a standard in plant breeding. As a result, the collection of phenotypic data is increasingly becoming a limiting factor in plant breeding. Genetic studies on root traits are being hampered by the complexity of these traits and the inaccessibility of the rhizosphere. With an increasing interest in phenotyping, breeders and scientists try to overcome these limitations, resulting in impressive developments in automated phenotyping platforms. Recently, many such platforms have been thoroughly described, yet their efficiency to increase genetic gain often remains undiscussed. This efficiency depends on the heritability of the phenotyped traits as well as the correlation of these traits with agronomically relevant breeding targets. This review provides an overview of the latest developments in root phenotyping and describes the environmental and genetic factors influencing root phenotype and heritability. It also intends to give direction to future phenotyping and breeding strategies for optimizing root system functioning. A quantitative framework to determine the efficiency of phenotyping platforms for genetic gain is described. By increasing heritability, managing effects caused by interactions between genotype and environment and by quantifying the genetic relation between traits phenotyped in platforms and ultimate breeding targets, phenotyping platforms can be utilized to their maximum potential. © The Author 2015. Published by Oxford University Press on behalf of the Society for Experimental Biology. All rights reserved. For permissions, please email: journals.permissions@oup.com.

  18. 中国特有产甜蛋白植物马槟榔常规繁育技术研究%Researches on Conventional Breeding Technology of Capparis masaikai Levl., a Sweet-protein Producing Plant in China

    Institute of Scientific and Technical Information of China (English)

    张超; 于旭东; 顾文亮; 朱会军; 胡新文; 郭建春

    2011-01-01

    研究濒危植物马槟榔的种子繁殖和压条繁殖方法,为其异地保护、繁殖和有效利用建立基础.探索种子预处理方法、存放时间、播种方法以及不同激素、温度、基质等对发芽率的影响,并研究普通压条和高空压条繁育技术.马槟榔种子为中度顽拗性种子,去除果皮后:晒干种子发芽率低;30℃烘干24 h种子发芽率为0;阴凉处晾干表面种子发芽率最高,离开母体种子约72天后种子失去活力.其最佳播种方法为:每年的11-12月,用新鲜种子播种,播种基质为红壤土:椰糠=1∶1;对种子进行开裂处理和激素处理有助于种子快速萌发并提高发芽率,而以10mg/L GA3的效果最佳,提前至少5天萌发.高于65℃低于100℃的热水处理4 h能提高种子的萌发率.高空压条是马槟榔较好的压条繁殖方法.该研究成功探索出了马槟榔较好的常规繁殖方法,可广泛应用于该植物的异地保护和小规模扩繁.%The objective is establishing the foundation for Capparis masakai ex-situ protection, propagation and utilization effectively by studying on the methods of seed breeding and layering.The facts of the seed pretreatment, seed storage, seed sowing and the different hormones, hot-water, and substrates on seed germination have been studied.At the same time, the technologies of common layering and air layering were also researched.The results showed that the seeds of Capparis masaikai belong to moderate recalcitrant ones,which lost their activity after about 72 days leaving mother plants.The dry seeds partly lowest or completely lost their activity drying in the sun or by oven, respectively.However, the seeds in nature conditions have high activity.The best sowing method was that the fresh seeds were sown on the substrate (red loam∶coconut residuum= 1∶1) in November or December.The seeds were cracked or pretreated with hormones could improve germination rate, and the best hormone was 10 mg/L GA3

  19. Hybrid recreation by reverse breeding in Arabidopsis thaliana.

    Science.gov (United States)

    Wijnker, Erik; Deurhof, Laurens; van de Belt, Jose; de Snoo, C Bastiaan; Blankestijn, Hetty; Becker, Frank; Ravi, Maruthachalam; Chan, Simon W L; van Dun, Kees; Lelivelt, Cilia L C; de Jong, Hans; Dirks, Rob; Keurentjes, Joost J B

    2014-04-01

    Hybrid crop varieties are traditionally produced by selecting and crossing parental lines to evaluate hybrid performance. Reverse breeding allows doing the opposite: selecting uncharacterized heterozygotes and generating parental lines from them. With these, the selected heterozygotes can be recreated as F1 hybrids, greatly increasing the number of hybrids that can be screened in breeding programs. Key to reverse breeding is the suppression of meiotic crossovers in a hybrid plant to ensure the transmission of nonrecombinant chromosomes to haploid gametes. These gametes are subsequently regenerated as doubled-haploid (DH) offspring. Each DH carries combinations of its parental chromosomes, and complementing pairs can be crossed to reconstitute the initial hybrid. Achiasmatic meiosis and haploid generation result in uncommon phenotypes among offspring owing to chromosome number variation. We describe how these features can be dealt with during a reverse-breeding experiment, which can be completed in six generations (∼1 year).

  20. 植物繁育系统中传粉机制的多样性及交配系统研究评析%An Overview of the Recent Studies of Diversity of Pollination and Mating System in Plant Breeding System

    Institute of Scientific and Technical Information of China (English)

    杨琨

    2012-01-01

    综述了植物有性繁育系统研究中的以下方面:1)从花及花序的设计及展示、性器官的表达、雌雄蕊的运动及随环境变化等方面概述传粉模式的多样性研究;2)植物通过近交来确保繁殖的成功及近交有害性研究;3)异交植物可进行自交,而自交植物也可进行异交,这种混合交配系统的时空动态、维持机理以及进化趋势的研究动态;4)一些分子标记在植物的繁育系统研究中的应用.%In this paper, we give an overview of recent studies of plant breeding systems and address the following four aspects. First, we summarize the studies of the diversity of pollina- tion in floral morphology, the design and display of flowers and inflorescence, the expression of sexual organs, the movement of pistils and stamens and their environment adaptation. Second, we address the studies on the effects of inbreeding, the purpose of which is to ensure the breeding, and hazardousness of inbreeding. Third, Cross pollinated plants can selfing reproduction and vice versa, spatial and dynamic patterns of the mixed mating system and their maintenance mechanisms and evolutionary trends. Fourth, some molecular markers were applied in plant breeding system research.

  1. Next generation breeding.

    Science.gov (United States)

    Barabaschi, Delfina; Tondelli, Alessandro; Desiderio, Francesca; Volante, Andrea; Vaccino, Patrizia; Valè, Giampiero; Cattivelli, Luigi

    2016-01-01

    The genomic revolution of the past decade has greatly improved our understanding of the genetic make-up of living organisms. The sequencing of crop genomes has completely changed our vision and interpretation of genome organization and evolution. Re-sequencing allows the identification of an unlimited number of markers as well as the analysis of germplasm allelic diversity based on allele mining approaches. High throughput marker technologies coupled with advanced phenotyping platforms provide new opportunities for discovering marker-trait associations which can sustain genomic-assisted breeding. The availability of genome sequencing information is enabling genome editing (site-specific mutagenesis), to obtain gene sequences desired by breeders. This review illustrates how next generation sequencing-derived information can be used to tailor genomic tools for different breeders' needs to revolutionize crop improvement. Copyright © 2015 Elsevier Ireland Ltd. All rights reserved.

  2. Potato breeding in the Netherlands

    NARCIS (Netherlands)

    Haan, de H.

    1953-01-01

    A remarkable feature of potato breeding in the Netherlands is the great number of private breeders who have concentrated their efforts on the improvement of the potato. The author calls attention to some circumstances and measures that have made potato breeding attractive in the Netherlands

  3. Genetic Diversity of Some Tomato Cultivars and Breeding Lines Commonly Used in Pakistani Breeding Program

    Directory of Open Access Journals (Sweden)

    Muhammad Azhar Shah

    2014-10-01

    Full Text Available Genetic diversity present in gene pool is an important determination for breeding programs, and characterization is useful of building crop plant collections primarily based on the knowledge of the presence of valuable genes and traits. Developing successful varieties for increasing the future yield and quality of tomato depend mainly on the genetic diversity of parents used in the breeding program. Molecular characterization of 21 tomato genotypes used in in Pakistani breeding program was studied using random amplified polymorphic DNA (RAPD markers. Total 102 bands were amplified among 21 genotypes using 20 RAPD primers. Overall 73.5% polymorphism was shown as 75 out of 102 loci were polymorphic. High degree of divergence between varieties was indicated by low level of monomorphic bands. The number of PCR products per primer varied from 2-8 with an average of 5.1 bands per primer. Primer GL J-20 and GL C-09 produced maximum number of bands whereas the primers GL A-09 produced the lowest. The polymorphism per RAPD primer ranged from 50% to 100% with an average of 73.5%. The accumulative analysis of amplified products generated by RAPD’s was enough to assess the genetic diversity among the genotypes. The information would be helpful for formulating future breeding and genome mapping programs. This study will also work as an indicator for tomato breeders to evolve varieties with genetic diverse back ground to achieve sustainability in tomato production in the country.

  4. Achievements in NS rapeseed hybrids breeding

    Directory of Open Access Journals (Sweden)

    Marjanović-Jeromela Ana

    2016-01-01

    Full Text Available The increased production of oilseed rape (Brassica napus L. is evident on a global scale, but also in Serbia in the last decade. Rapeseed is used primarily for vegetable oil and processing industry, but also as a source of protein for animal feed and green manure. Following the cultivation of varieties, breeding and cultivation of hybrid rapeseed started in the 1990's, to take advantage of heterosis in F1 generation, while protecting the breeder's rights during seed commercialization. The breeding of hybrid oilseed rape requires high quality starting material (lines with good combining abilities for introduction of male sterility. Ogura sterility system is primarily used at the Institute of Field and Vegetable Crops, Novi Sad, Serbia. To use this system, separate lines are modified with genes for cytoplasmic male sterility (cms female line - mother line and restoration of fertility (Rf male lines - father line. In order to maintain the sterility of the mother line it is necessary to produce a maintainer line of cytoplasmic male sterility. Creation of these lines and hybrids at the Institute of Field and Vegetable Crops was successfully monitored with intense use of cytogenetic laboratory methods. The structure and vitality of pollen, including different phases during meiosis were checked so that cms stability was confirmed during the introduction of these genes into different lines. Rapeseed breeding program in Serbia resulted in numerous varieties through collaboration of researchers engaged in breeding and genetics of this plant species. So far, in addition to 12 varieties of winter rapeseed and two varieties of spring rapeseed, a new hybrid of winter rapeseed NS Ras was registered in Serbia. NS Ras is an early-maturing hybrid characterized by high seed yield and oil content. Average yield of NS Ras for two seasons and three sites was 4256 kg ha-1 of seed and 1704 kg ha-1 of oil. Three promising winter rapeseed hybrids are in the process of

  5. Breeding of a Tomato Genotype Readily Accessible to Genetic Manipulation

    NARCIS (Netherlands)

    Koornneef, Maarten; Hanhart, Corrie; Jongsma, Maarten; Toma, Ingrid; Weide, Rob; Zabel, Pim; Hille, Jacques

    1986-01-01

    A tomato genotype, superior in regenerating plants from cell cultures, was obtained by transferring regeneration capacity from Lycopersicon peruvianum into L. esculentum by classical breeding. This genotype, MsK93, greatly facilitates genetic manipulation of tomato, as was demonstrated by successful

  6. Current progress in trans- and cisgenic apple and strawberry Breeding

    NARCIS (Netherlands)

    Krens, F.A.; Salentijn, E.M.J.; Schaart, J.; Schouten, H.J.; Jacobsen, E.

    2012-01-01

    A summary is presented of the state-of-the-art in apple and strawberry biotechnological research going on in the department of Plant Breeding at Wageningen University and Research Centre. In apple, the research directed towards the introduction of scab resistance by inserting a barley gene has reach

  7. Bridging sd1 molecular knowledge with recent breeding strategies ...

    African Journals Online (AJOL)

    USER

    2010-04-12

    Apr 12, 2010 ... The sd1 allele present in 'IR8' is a null allele, containing a 383 bp ... 28, RH (%) = 60 and 12 h photoperiod). DNA extraction and PCR ... Comparison of plant height between seven breeding lines was done using Analysis of ...

  8. Breeding of a Tomato Genotype Readily Accessible to Genetic Manipulation

    NARCIS (Netherlands)

    Koornneef, Maarten; Hanhart, Corrie; Jongsma, Maarten; Toma, Ingrid; Weide, Rob; Zabel, Pim; Hille, Jacques

    1986-01-01

    A tomato genotype, superior in regenerating plants from cell cultures, was obtained by transferring regeneration capacity from Lycopersicon peruvianum into L. esculentum by classical breeding. This genotype, MsK93, greatly facilitates genetic manipulation of tomato, as was demonstrated by successful

  9. Peditree: Pedigree Database Analysis and Visualization for Breeding and Science

    NARCIS (Netherlands)

    Berloo, van R.; Hutten, R.C.B.

    2005-01-01

    At the Wageningen Laboratory of Plant Breeding, a software package has been developed to query a simple structured database with variety pedigree data. The package, called Peditree, creates a tree-shaped representation of pedigree information and has several visualization and lookup options.

  10. RosBREED: Enabling Marker-Assisted Breeding in Rosaceae

    Science.gov (United States)

    Genomics research has not yet been translated into routine practical application in breeding Rosaceae fruit crops (peach, apple, strawberry, cherry, apricot, pear, raspberry, etc.). Through dedicated efforts of many researchers worldwide, a wealth of genomics resources has accumulated, including ES...

  11. RosBREED: Enabling marker-assisted breeding in Rosaceae

    NARCIS (Netherlands)

    Iezzoni, A.F.; Weebadde, C.; Luby, J.; Yue, C.; Weg, van de W.E.; Fazio, G.; Main, D.; Peace, C.P.; Bassil, N.V.; McFerson, J.

    2010-01-01

    Genomics research has not yet been translated into routine practical application in breeding Rosaceae fruit crops (peach, apple, strawberry, cherry, apricot, pear, raspberry, etc.). Through dedicated efforts of many researchers worldwide, a wealth of genomics resources has accumulated, including EST

  12. Prunus transcription factors: Breeding perspectives

    Directory of Open Access Journals (Sweden)

    Valmor João Bianchi

    2015-06-01

    Full Text Available Many plant processes depend on differential gene expression, which is generally controlled by complex proteins called transcription factors (TFs. In peach, 1,533 TFs have been identified, accounting for about 5.5% of the 27,852 protein-coding genes. These TFs are the reference for the rest of the Prunus species. TF studies in Prunus have been performed on the gene expression analysis of different agronomic traits, including control of the flowering process, fruit quality, and biotic and abiotic stress resistance. These studies, using quantitative RT-PCR, have mainly been performed in peach, and to a lesser extent in other species, including almond, apricot, black cherry, Fuji cherry, Japanese apricot, plum, and sour and sweet cherry. Other tools have also been used in TF studies, including cDNA-AFLP, LC-ESI-MS, RNA and DNA blotting or mapping. More recently, new tools assayed include microarray and high-throughput DNA sequencing (DNA-Seq and RNA sequencing (RNA-Seq. New functional genomics opportunities include genome resequencing and the well-known synteny among Prunus genomes and transcriptomes. These new functional studies should be applied in breeding programs in the development of molecular markers. With the genome sequences available, some strategies that have been used in model systems (such as SNP genotyping assays and genotyping-by-sequencing may be applicable in the functional analysis of Prunus TFs as well. In addition, the knowledge of the gene functions and position in the peach reference genome of the TFs represents an additional advantage. These facts could greatly facilitate the isolation of genes via QTL (quantitative trait loci map-based cloning in the different Prunus species, following the association of these TFs with the identified QTLs using the peach reference genome.

  13. 植物原生质体全能性表达及其在甘蓝类蔬菜育种上的应用%Totipotency Expression of Plant Protoplast and Its Application in Brassica oleracea L.Vegetable Breeding

    Institute of Scientific and Technical Information of China (English)

    盛小光; 顾宏辉; 赵振卿; 虞慧芳; 王建升; 张晓辉

    2011-01-01

    The isolated protoplasts, exposed cells without coated cell wall, own the totipotency to regenerate a whole plant under appropriate culture conditions. Separation, culture and reproduction technology of plant protoplast is a platform for plant breeding, gene engineering and cell physiology study. Therefore it is of important significance. This paper expounds the obtain, culture and regeneration etc key technology in the process of protoplast totipotency expression, and their application in Brassica oleracea vegetables breeding. Existing problems in protoplast technology were discussed. Suggestions were proposed for improving plant protoplast culture system and for this work in the near future.%植物原生质体指植物除去细胞壁后被质膜包被的裸露细胞,在适当培养条件下具有再生成完整植株的全能性.植物原生质体分离、培养及植株再生技术是进行植物育种、基因工程、遗传理论及细胞生理特性研究的平台,具有重要的研究意义.本文概述了植物原生质体全能性表达过程中原生质体的获得、培养和再生等关键技术环节及其在甘蓝类蔬菜育种上的应用,同时讨论了原生质体培养技术中存在的问题,并且对完善植物原生质体培养体系及今后的工作方向提出了建议.

  14. Breeding habitats of mosquitoes in Goa.

    Science.gov (United States)

    Kulkarni, S M; Naik, P S

    1989-03-01

    Studies carried out in Goa from 1986 to 1987 revealed immature stages of 43 species of mosquitoes. Breeding habitats were divided into three categories, viz., (i) Ground water habitats consisting of ground pools and tanks, rocky pools, paddy fields and stream beds, yielding 30 species; (ii) Plant habitats consisting of tree holes and fallen coconut shells and leaf sheaths yielding 20 species; and (iii) Domestic/peridomestic habitats consisting of cement tanks, glass, earthen, metallic containers and tyres yielding 11 species. Five species viz., Anopheles subpictus, Aedes albopictus, Armigeres subalbatus, Culex quinquefasciatus and Cx. pallidothorax were found in all three types of habitats. Cx. tritaeniorhynchus preferred to breed in ground pools and paddy fields but was found in domestic cement tanks and ground tanks in adverse season. Majority of the anophelines and culicines were found in ground water habitats. Five out of 11 species of Aedes were found in tree holes. Aedes aegypti and Toxorhynchites splendens were found only in discarded tyres. Three species of the genus Uranotaenia, viz., U. bicolor, U. stricklandi and U. campestris were recorded from stream beds and plant containers.

  15. Illinois’ 2000 breeding season report

    Data.gov (United States)

    US Fish and Wildlife Service, Department of the Interior — This report summarizes the 2000 breeding season for grassland birds in Illinois. The report begins by summarizing weather conditions throughout the season and...

  16. Atlantic Flyway Breeding Waterfowl Survey

    Data.gov (United States)

    US Fish and Wildlife Service, Department of the Interior — The Atlantic Flyway Technical Section initiated this breeding waterfowl survey in 11 northeast states ranging from New Hampshire to Virginia.

  17. Tricolored Blackbird - Breeding [ds20

    Data.gov (United States)

    California Department of Resources — These data come from observations of breeding tricolored blackbirds throughout their range in California. NAD27 coordinates are given in the data for each record....

  18. Bee Queen Breeding Methods - Review

    Directory of Open Access Journals (Sweden)

    Silvia Patruica

    2016-05-01

    Full Text Available The biological potential of a bee family is mainly generated by the biological value of the queen. Whether we grow queens widely or just for our own apiaries, we must consider the acquisition of high-quality biological material, and also the creation of optimal feeding and caring conditions, in order to obtain high genetic value queens. Queen breeding technology starts with the setting of hoeing families, nurse families, drone-breeding families – necessary for the pairing of young queens, and also of the families which will provide the bees used to populate the nuclei where the next queens will hatch. The complex of requirements for the breeding of good, high-production queens is sometimes hard to met, under the application of artificial methods. The selection of breeding method must rely on all these requirements and on the beekeeper’s level of training.

  19. Application of genomics to forage crop breeding for quality traits

    DEFF Research Database (Denmark)

    Lübberstedt, Thomas

    2007-01-01

    Forage quality depends on the digestibility of fodder, and can be directly measured by the intake and metabolic conversion in animal trials. However, animal trials are time-consuming, laborious, and thus expensive. It is not possible to study thousands of plant genotypes, as required in breeding...... studied in detail and sequence motifs with likely effect on forage quality have been identified by association studies. Moreover, transgenic approaches substantiated the effect of several of these genes on forage quality. Perspectives and limitations of these findings for forage crop breeding...

  20. The role of molecular markers and marker assisted selection in breeding for organic agriculture

    DEFF Research Database (Denmark)

    Lammerts van Bueren, E.T.; Backes, G.; de Vriend, H.

    2010-01-01

    Plant geneticists consider molecular marker assisted selection a useful additional tool in plant breeding programs to make selection more efficient. Standards for organic agriculture do not exclude the use of molecular markers as such, however for the organic sector the appropriateness of molecular...... markers is not self-evident and is often debated. Organic and low-input farming conditions require breeding for robust and flexible varieties, which may be hampered by too much focus on the molecular level. Pros and contras for application of molecular markers in breeding for organic agriculture...... identified, e.g. better knowledge about gene pool of breeding material, more efficient introgression of new resistance genes from wild relatives and testing pyramided genes. There were also common concerns among breeders aiming at breeding for organic and/or conventional agriculture, such as the increasing...

  1. Breeding the oil palm (Elaeis guineensis Jacq. for climate change

    Directory of Open Access Journals (Sweden)

    Rival Alain

    2017-01-01

    Full Text Available Breeding the oil palm (Elaeis guineensis Jacq. for climate change requires multidisciplinary and collaborative research by nature: indeed – besides genetics and structural and functional genomics – almost all disciplines related to life sciences are involved. Research work also relies on the identification of genetic variation in the strategies of response to stress developed by the plant: this implies the exploration of resources provided by natural variation, germplasm collections, selected genitors from breeding programs together with material of interest collected from smallholders. The phenotyping of selected plant material under biotic/abiotic stress will involve new methods for high-throughput phenotyping and genomic approaches will be followed for the identification of genes underlying the variation of traits which will be used as selection targets. Also, improvements in understanding how climate change may influence chemical and physical processes in soils, how this may affect nutrient availability, and how the plant responds to changed availability of nutrients will also influence oil palm breeding programs. Molecular approaches and tools have great potential to optimize patterns of plant breeding, especially for perennial species. In recent years, there has been an exponential increase in molecular resources and methods aimed at identifying polymorphisms which control the traits of interest and exploring the mechanisms linking these polymorphisms to phenotypes. With genomic resources becoming increasingly available for the oil palm (sequencing, resequencing and chips development the exploration of the genetic basis of complex traits such as oil yield or resistance to disease is now possible. Consequently the availability and sharing of such a large amount of data is currently reshaping most of oil palm breeding strategies.

  2. Breeding performance in the Italian chicken breed Mericanel della Brianza

    Directory of Open Access Journals (Sweden)

    Silvia Cerolini

    Full Text Available In Italy, 90 local avian breeds were described; the majority (61% were classified as extinct and only 8.9% as still widely spread. Therefore, efforts for conservation of Italian avian breeds are urgently required. The aim of this study was to record the breeding performance of the Italian breed Mericanel della Brianza to multiply a small population, in order to develop a conservation programme. Fourteen females and eight males were available at the beginning of the reproductive season in 2009 and organised into eight families (1 male/1-2 females kept in floor pens. Birds received a photoperiod of 14L:10D and were fed ad libitum. Breeding performance was recorded from March to June. Egg production and egg weight were recorded daily; eggs were set every two weeks and fertility, embryo mortality and hatchability were recorded. Mean egg production was 37% and mean egg weight was 34±3.49 g. High fertility values from 94% to 87% were recorded in the first three settings and the overall mean fertility value was 81.6%. Overall hatchability was only 49.6% owing to a high proportion of dead embryos. Embryo mortality occurred mainly between days 2 and 7 of incubation and during hatching. The highest hatchability values were recorded in settings 1 and 2, 69% and 60% respectively, and a large decrease was found in the subsequent settings. Marked variations in egg production, fertility, hatchability and embryo mortality were found among families. The present results represent the basic know ledge of reproductive parameters necessary to improve the reproductive efficiency of the breed within a conservation plan.

  3. Breeding performance in the Italian chicken breed Mericanel della Brianza

    Directory of Open Access Journals (Sweden)

    Stefano P. Marelli

    2010-11-01

    Full Text Available In Italy, 90 local avian breeds were described, the majority (61% were classified extinct and only 8.9 % still diffused. Therefore, efforts for conservation of Italian avian breeds are urgently required. The aim of this study was to record the breeding performance of the Italian breed Mericanel della Brianza and multiply a small population, in order to develop a conservation program. Fourteen females and 8 males were available at the beginning of the reproductive season in 2009 and organized in 8 families (1 male/1-2 females kept in floor pens. Birds received a photoperiod of 14L:10D and fed ad libitum. Breeding performance was recorded from March to June. Egg production and egg weight were recorded daily; eggs were set every 2 weeks and fertility, embryo mortality and hatchability were recorded. Mean egg production was 37% and mean egg weight was 34±3.49 g. High fertility values were recorded in the first three settings, from 94 to 87%, and the overall mean fertility value was 81.6%. Overall hatchability was only 49.6% due to a high proportion of dead embryos. Embryo mortality occurred mainly between day 2 and 7 of incubation and during hatch. Highest hatchability values were recorded in setting 1 and 2, 69 and 60% respectively, and a great decrease was found in the following settings. Great variations in egg production, fertility, hatchability and embryo mortality were found among families. The present results are the basic knowledge on reproductive parameters necessary to improve the reproductive efficiency of the breed within a conservation plan.

  4. AlphaSim: Software for Breeding Program Simulation.

    Science.gov (United States)

    Faux, Anne-Michelle; Gorjanc, Gregor; Gaynor, R Chris; Battagin, Mara; Edwards, Stefan M; Wilson, David L; Hearne, Sarah J; Gonen, Serap; Hickey, John M

    2016-11-01

    This paper describes AlphaSim, a software package for simulating plant and animal breeding programs. AlphaSim enables the simulation of multiple aspects of breeding programs with a high degree of flexibility. AlphaSim simulates breeding programs in a series of steps: (i) simulate haplotype sequences and pedigree; (ii) drop haplotypes into the base generation of the pedigree and select single-nucleotide polymorphism (SNP) and quantitative trait nucleotide (QTN); (iii) assign QTN effects, calculate genetic values, and simulate phenotypes; (iv) drop haplotypes into the burn-in generations; and (v) perform selection and simulate new generations. The program is flexible in terms of historical population structure and diversity, recent pedigree structure, trait architecture, and selection strategy. It integrates biotechnologies such as doubled-haploids (DHs) and gene editing and allows the user to simulate multiple traits and multiple environments, specify recombination hot spots and cold spots, specify gene jungles and deserts, perform genomic predictions, and apply optimal contribution selection. AlphaSim also includes restart functionalities, which increase its flexibility by allowing the simulation process to be paused so that the parameters can be changed or to import an externally created pedigree, trial design, or results of an analysis of previously simulated data. By combining the options, a user can simulate simple or complex breeding programs with several generations, variable population structures and variable breeding decisions over time. In conclusion, AlphaSim is a flexible and computationally efficient software package to simulate biotechnology enhanced breeding programs with the aim of performing rapid, low-cost, and objective in silico comparison of breeding technologies. Copyright © 2016 Crop Science Society of America.

  5. Genomic tools in cowpea breeding programs: status and perspectives

    Directory of Open Access Journals (Sweden)

    Ousmane eBoukar

    2016-06-01

    Full Text Available Cowpea is one of the most important grain legumes in sub-Saharan Africa (SSA. It provides strong support to the livelihood of small-scale farmers through its contributions to their nutritional security, income generation and soil fertility enhancement. Worldwide about 6.5 million metric tons of cowpea are produced annually on about 14.5 million hectares. The low productivity of cowpea is attributable to numerous abiotic and biotic constraints. The abiotic stress factors comprise drought, low soil fertility, and heat while biotic constraints include insects, diseases, parasitic weeds and nematodes. Cowpea farmers also have limited access to quality seeds of improved varieties for planting. Some progress has been made through conventional breeding at international and national research institutions in the last three decades. Cowpea improvement could also benefit from modern breeding methods based on molecular genetic tools. A number of advances in cowpea genetic linkage maps, and quantitative trait loci associated with some desirable traits such as resistance to Striga, Macrophomina, Fusarium wilt, bacterial blight, root-knot nematodes, aphids and foliar thrips have been reported. An improved consensus genetic linkage map has been developed and used to identify QTLs of additional traits. In order to take advantage of these developments single nucleotide polymorphism (SNP genotyping is being streamlined to establish an efficient workflow supported by genotyping support service (GSS-client interactions. About 1100 SNPs mapped on the cowpea genome were converted by LGC Genomics to KASP assays. Several cowpea breeding programs have been exploiting these resources to implement molecular breeding, especially for MARS and MABC, to accelerate cowpea variety improvement. The combination of conventional breeding and molecular breeding strategies, with workflow managed through the CGIAR breeding management system (BMS, promises an increase in the number of

  6. Genomic Tools in Cowpea Breeding Programs: Status and Perspectives.

    Science.gov (United States)

    Boukar, Ousmane; Fatokun, Christian A; Huynh, Bao-Lam; Roberts, Philip A; Close, Timothy J

    2016-01-01

    Cowpea is one of the most important grain legumes in sub-Saharan Africa (SSA). It provides strong support to the livelihood of small-scale farmers through its contributions to their nutritional security, income generation and soil fertility enhancement. Worldwide about 6.5 million metric tons of cowpea are produced annually on about 14.5 million hectares. The low productivity of cowpea is attributable to numerous abiotic and biotic constraints. The abiotic stress factors comprise drought, low soil fertility, and heat while biotic constraints include insects, diseases, parasitic weeds, and nematodes. Cowpea farmers also have limited access to quality seeds of improved varieties for planting. Some progress has been made through conventional breeding at international and national research institutions in the last three decades. Cowpea improvement could also benefit from modern breeding methods based on molecular genetic tools. A number of advances in cowpea genetic linkage maps, and quantitative trait loci associated with some desirable traits such as resistance to Striga, Macrophomina, Fusarium wilt, bacterial blight, root-knot nematodes, aphids, and foliar thrips have been reported. An improved consensus genetic linkage map has been developed and used to identify QTLs of additional traits. In order to take advantage of these developments single nucleotide polymorphism (SNP) genotyping is being streamlined to establish an efficient workflow supported by genotyping support service (GSS)-client interactions. About 1100 SNPs mapped on the cowpea genome were converted by LGC Genomics to KASP assays. Several cowpea breeding programs have been exploiting these resources to implement molecular breeding, especially for MARS and MABC, to accelerate cowpea variety improvement. The combination of conventional breeding and molecular breeding strategies, with workflow managed through the CGIAR breeding management system (BMS), promises an increase in the number of improved

  7. CASSAVA BREEDING I: THE VALUE OF BREEDING VALUE

    Directory of Open Access Journals (Sweden)

    Hernán Ceballos

    2016-08-01

    Full Text Available Breeding cassava relies on several selection stages (single row trial-SRT; preliminary; advanced; and uniform yield trials - UYT. This study uses data from 14 years of evaluations. From more than 20,000 genotypes initially evaluated only 114 reached the last stage. The objective was to assess how the data at SRT could be used to predict the probabilities of genotypes reaching the UYT. Phenotypic data from each genotype at SRT was integrated into the selection index (SIN used by the cassava breeding program. Average SIN from all the progenies derived from each progenitor was then obtained. Average SIN is an approximation of the breeding value of each progenitor. Data clearly suggested that some genotypes were better progenitors than others (e.g. high number of their progenies reaching the UYT, suggesting important variation in breeding values of progenitors. However, regression of average SIN of each parental genotype on the number of their respective progenies reaching UYT resulted in a negligible coefficient of determination (r2 = 0.05. Breeding value (e.g. average SIN at SRT was not efficient predicting which genotypes were more likely to reach the UYT stage. Number of families and progenies derived from a given progenitor were more efficient predicting the probabilities of the progeny from a given parent reaching the UYT stage. Large within-family genetic variation tends to mask the true breeding value of each progenitor. The use of partially inbred progenitors (e.g. S1 or S2 genotypes would reduce the within-family genetic variation thus making the assessment of breeding value more accurate. Moreover, partial inbreeding of progenitors can improve the breeding value of the original (S0 parental material and sharply accelerate genetic gains. For instance, homozygous S1 genotypes for the dominant resistance to cassava mosaic disease could be generated and selected. All gametes from these selected S1 genotypes would carry the desirable allele

  8. Cassava Breeding I: The Value of Breeding Value

    Science.gov (United States)

    Ceballos, Hernán; Pérez, Juan C.; Joaqui Barandica, Orlando; Lenis, Jorge I.; Morante, Nelson; Calle, Fernando; Pino, Lizbeth; Hershey, Clair H.

    2016-01-01

    Breeding cassava relies on several selection stages (single row trial-SRT; preliminary; advanced; and uniform yield trials—UYT). This study uses data from 14 years of evaluations. From more than 20,000 genotypes initially evaluated only 114 reached the last stage. The objective was to assess how the data at SRT could be used to predict the probabilities of genotypes reaching the UYT. Phenotypic data from each genotype at SRT was integrated into the selection index (SIN) used by the cassava breeding program. Average SIN from all the progenies derived from each progenitor was then obtained. Average SIN is an approximation of the breeding value of each progenitor. Data clearly suggested that some genotypes were better progenitors than others (e.g., high number of their progenies reaching the UYT), suggesting important variation in breeding values of progenitors. However, regression of average SIN of each parental genotype on the number of their respective progenies reaching UYT resulted in a negligible coefficient of determination (r2 = 0.05). Breeding value (e.g., average SIN) at SRT was not efficient predicting which genotypes were more likely to reach the UYT stage. Number of families and progenies derived from a given progenitor were more efficient predicting the probabilities of the progeny from a given parent reaching the UYT stage. Large within-family genetic variation tends to mask the true breeding value of each progenitor. The use of partially inbred progenitors (e.g., S1 or S2 genotypes) would reduce the within-family genetic variation thus making the assessment of breeding value more accurate. Moreover, partial inbreeding of progenitors can improve the breeding value of the original (S0) parental material and sharply accelerate genetic gains. For instance, homozygous S1 genotypes for the dominant resistance to cassava mosaic disease (CMD) could be generated and selected. All gametes from these selected S1 genotypes would carry the desirable allele and

  9. The role of molecular markers and marker assisted selection in breeding for organic agriculture

    DEFF Research Database (Denmark)

    Lammerts van Bueren, E.T.; Backes, G.; de Vriend, H.

    2010-01-01

    Plant geneticists consider molecular marker assisted selection a useful additional tool in plant breeding programs to make selection more efficient. Standards for organic agriculture do not exclude the use of molecular markers as such, however for the organic sector the appropriateness of molecular...... was the topic of a recent European plant breeding workshop. The participants evaluated strengths, weaknesses, opportunities, and threats of the use of molecular markers and we formalized their inputs into breeder’s perspectives and perspectives seen from the organic sector’s standpoint. Clear strengths were...... markers is not self-evident and is often debated. Organic and low-input farming conditions require breeding for robust and flexible varieties, which may be hampered by too much focus on the molecular level. Pros and contras for application of molecular markers in breeding for organic agriculture...

  10. 100-year history of the development of bread winter wheat breeding programs

    Directory of Open Access Journals (Sweden)

    М. А. Литвиненко

    2016-05-01

    Full Text Available Purpose. Review of the main achievements of the Wheat Breeding and Seed ProductionDepartment in the Plant Breeding and Genetic Institute – National Centre of Seed and Cultivar Investigation in the developing theoretical principles of breeding and creation of winter wheat varieties of different types during 100-year (1916–2016 period of breeding programs realization. Results. The main theoretical, methodical developments and breeding achievements of Wheat Breeding and Seed Production Department during 100-year (1916–2016 history have been considered. In the course of the Department activity, the research and metho­dology grounds of bread winter wheat breeding and seed production have been laid, 9 stages of breeding programs development have been accomplished. As a result, more than 130 varieties of different types have been created, 87 of them have been released in some periods or registered in the State registers of plants varieties of Ukraine and other countries and grown in the total sowing area about 220 million hectares.

  11. Some critical considerations on rice high-yielding breeding in China

    Institute of Scientific and Technical Information of China (English)

    ZHU Lihong

    2007-01-01

    Views and comments concerning rice highyielding breeding in China had been touched upon:(1) historical development of rice breeding in China and its prominent contributions recounted;current challenges evolved from rapid population increase,erosion of key natural resources and socioeconomic changes envisaged;(2) concept of extra or super high-yielding rice breeding and related ideas embraced nowadays in the main rice-producing countries assessed;the conception of so-called superrice in China could have been misled and misunderstood,and no substantial genetical differences could be affirmed yet between superrice and modern high-yielding rice;(3) two strategical approaches of rice production and breeding in China would have been persistent in the construction of most favorable-to-growth rice fields to plant rice varieties with high-yielding potentiality as well as renovation and rejuvenation of less favorable rice fields to plant most adaptableto-ecoenvironment varieties with promising productivity;in addition,breeding for rice varieties compatible with the specific rice regions ridden by adverse ecoenvironments;(4) overview of the relationship between the development of genetical researches and the perspective of rice breeding;integration of the classical genetical principles and breeding methods and techniques wherefrom with molecular biotechniques underscored.Finally,appeal to the breeders to adhere to due attentions to the development of genetics and promote pragmatism and traditional ethic solemnly so as to live up to implementing the national rice breeding mandates.

  12. Emperor penguins breeding on iceshelves.

    Science.gov (United States)

    Fretwell, Peter T; Trathan, Phil N; Wienecke, Barbara; Kooyman, Gerald L

    2014-01-01

    We describe a new breeding behaviour discovered in emperor penguins; utilizing satellite and aerial-survey observations four emperor penguin breeding colonies have been recorded as existing on ice-shelves. Emperors have previously been considered as a sea-ice obligate species, with 44 of the 46 colonies located on sea-ice (the other two small colonies are on land). Of the colonies found on ice-shelves, two are newly discovered, and these have been recorded on shelves every season that they have been observed, the other two have been recorded both on ice-shelves and sea-ice in different breeding seasons. We conduct two analyses; the first using synthetic aperture radar data to assess why the largest of the four colonies, for which we have most data, locates sometimes on the shelf and sometimes on the sea-ice, and find that in years where the sea-ice forms late, the colony relocates onto the ice-shelf. The second analysis uses a number of environmental variables to test the habitat marginality of all emperor penguin breeding sites. We find that three of the four colonies reported in this study are in the most northerly, warmest conditions where sea-ice is often sub-optimal. The emperor penguin's reliance on sea-ice as a breeding platform coupled with recent concerns over changed sea-ice patterns consequent on regional warming, has led to their designation as "near threatened" in the IUCN red list. Current climate models predict that future loss of sea-ice around the Antarctic coastline will negatively impact emperor numbers; recent estimates suggest a halving of the population by 2052. The discovery of this new breeding behaviour at marginal sites could mitigate some of the consequences of sea-ice loss; potential benefits and whether these are permanent or temporary need to be considered and understood before further attempts are made to predict the population trajectory of this iconic species.

  13. Breeding monkeys for biomedical research

    Science.gov (United States)

    Bourne, G. H.; Golarzdebourne, M. N.; Keeling, M. E.

    1973-01-01

    Captive bred rhesus monkeys show much less pathology than wild born animals. The monkeys may be bred in cages or in an outdoor compound. Cage bred animals are not psychologically normal which makes then unsuited for some types of space related research. Compound breeding provides contact between mother and infant and an opportunity for the infants to play with their peers which are important requirements to help maintain their behavioral integrity. Offspring harvested after a year in the compound appear behaviorally normal and show little histopathology. Compound breeding is also an economical method for the rapid production of young animals. The colony can double its size about every two and a half years.

  14. A Summarized Opinion on Application of Crop Male Sterility in Plant Breeding%作物雄性不育性在育种中的应用概评

    Institute of Scientific and Technical Information of China (English)

    秦太辰

    2011-01-01

    概述总结了作物雄性不育性的类别与遗传特点。雄性不育性的遗传机理涉及细胞质遗传的现象,目前已初步探明玉米C群不育系的胞质基因可能是atp6-c,芝麻不育胞质基因拟为atpA。雄性不育化杂交种在实践中主要应用于玉米、水稻和蔬菜中。尽管现有近交理论、DNA甲基化效用、水稻胞质与核不育系遗传等理论提出,雄性不育化育种的基本理论尚需进一步探讨。在雄性不育化育种技术上,要逐步解决难点作物,如小麦、荞麦、菜豆等的不育化育种问题。%This paper summarized the type and genetic characteristics of male sterility. The mechanism of male sterility is involved in cytoplasmic heredity. It has been initially proved that atp6 c and aptA are the cytoplasmic genes of maize sterile line C group and namie male sterile line, respectively. Male sterility hybrids are extensively applied in corp production, shuch as maize, rice and vegetables. Despite some theories were proposed, such as inbreeding theory, DNA methlation and genetics of rice cytoplasm male sterile line, the basic theories of male sterile breeding requests further study. This paper suggested to gradually resolve the difficulties of crop male sterile hybridization breeding in wheat, buckwheat and navy beans.

  15. Sport horses : breeding specialist from a single breeding programme?

    NARCIS (Netherlands)

    Rovere, G.A.

    2016-01-01

    Summary The general goal of this thesis was to provide information useful for the breeding programme of the Royal Dutch Warmblood Studbook (KWPN) in relation with the ongoing specialisation of the population. Data provided by KWPN consisted of records from studbook-first inspection,

  16. Development of breeding objectives for beef cattle breeding ...

    African Journals Online (AJOL)

    Mnr J F Kluyts

    The purpose of this article is to review the development of breeding objectives in beef cattle ... selection criteria, and estimation of phenotypic and genetic parameters. ... Unfortunately, the evolution from a performance .... The beef cattle industry has a history of chasing and promoting maximum values (e.g. maximum weight).

  17. Breed base representation in dairy animals of 5 breeds

    Science.gov (United States)

    Inheritance of DNA from different dairy breeds can be determined by genotyping, just as individual ancestors such as parents, grandparents, or even great grandparents can be identified correctly in a high percentage of the cases by genotyping even if not reported or reported incorrectly in pedigrees...

  18. Comparison of molecular breeding values based on within- and across-breed training in beef cattle.

    Science.gov (United States)

    Kachman, Stephen D; Spangler, Matthew L; Bennett, Gary L; Hanford, Kathryn J; Kuehn, Larry A; Snelling, Warren M; Thallman, R Mark; Saatchi, Mahdi; Garrick, Dorian J; Schnabel, Robert D; Taylor, Jeremy F; Pollak, E John

    2013-08-16

    Although the efficacy of genomic predictors based on within-breed training looks promising, it is necessary to develop and evaluate across-breed predictors for the technology to be fully applied in the beef industry. The efficacies of genomic predictors trained in one breed and utilized to predict genetic merit in differing breeds based on simulation studies have been reported, as have the efficacies of predictors trained using data from multiple breeds to predict the genetic merit of purebreds. However, comparable studies using beef cattle field data have not been reported. Molecular breeding values for weaning and yearling weight were derived and evaluated using a database containing BovineSNP50 genotypes for 7294 animals from 13 breeds in the training set and 2277 animals from seven breeds (Angus, Red Angus, Hereford, Charolais, Gelbvieh, Limousin, and Simmental) in the evaluation set. Six single-breed and four across-breed genomic predictors were trained using pooled data from purebred animals. Molecular breeding values were evaluated using field data, including genotypes for 2227 animals and phenotypic records of animals born in 2008 or later. Accuracies of molecular breeding values were estimated based on the genetic correlation between the molecular breeding value and trait phenotype. With one exception, the estimated genetic correlations of within-breed molecular breeding values with trait phenotype were greater than 0.28 when evaluated in the breed used for training. Most estimated genetic correlations for the across-breed trained molecular breeding values were moderate (> 0.30). When molecular breeding values were evaluated in breeds that were not in the training set, estimated genetic correlations clustered around zero. Even for closely related breeds, within- or across-breed trained molecular breeding values have limited prediction accuracy for breeds that were not in the training set. For breeds in the training set, across- and within-breed trained

  19. Plant minichromosomes.

    Science.gov (United States)

    Birchler, James A; Graham, Nathaniel D; Swyers, Nathan C; Cody, Jon P; McCaw, Morgan E

    2016-02-01

    Plant minichromosomes have the potential for stacking multiple traits on a separate entity from the remainder of the genome. Transgenes carried on an independent chromosome would facilitate conferring many new properties to plants and using minichromosomes as genetic tools. The favored method for producing plant minichromosomes is telomere-mediated chromosomal truncation because the epigenetic nature of centromere function prevents using centromere sequences to confer the ability to organize a kinetochore when reintroduced into plant cells. Because haploid induction procedures are not always complete in eliminating one parental genome, chromosomes from the inducer lines are often present in plants that are otherwise haploid. This fact suggests that minichromosomes could be combined with doubled haploid breeding to transfer stacked traits more easily to multiple lines and to use minichromosomes for massive scale genome editing.

  20. The evolution of potato breeding

    Science.gov (United States)

    Potato cultivars in most regions of the world are tetraploid and clonally propagated. For over a century, the breeding strategy has been phenotypic recurrent selection. However, the polyploid nature of the crop prevents breeders from eliminating deleterious alleles and assembling positive alleles fo...

  1. Rose breeding: past, present, prospects

    NARCIS (Netherlands)

    Vries, de D.P.; Dubois, L.A.M.

    1996-01-01

    In this review the PAST, PRESENT and PROSPECT will be considered as three separate periods in the history of the breeding and development of rose cultivars. The recurring theme is the genetic variation. This theme was chosen because there is justified doubt as to sufficient genetic variation

  2. Rose breeding: past, present, prospects

    NARCIS (Netherlands)

    Vries, de D.P.; Dubois, L.A.M.

    1996-01-01

    In this review the PAST, PRESENT and PROSPECT will be considered as three separate periods in the history of the breeding and development of rose cultivars. The recurring theme is the genetic variation. This theme was chosen because there is justified doubt as to sufficient genetic variation availab

  3. Accuracies of genomically estimated breeding values from pure-breed and across-breed predictions in Australian beef cattle.

    Science.gov (United States)

    Boerner, Vinzent; Johnston, David J; Tier, Bruce

    2014-10-24

    The major obstacles for the implementation of genomic selection in Australian beef cattle are the variety of breeds and in general, small numbers of genotyped and phenotyped individuals per breed. The Australian Beef Cooperative Research Center (Beef CRC) investigated these issues by deriving genomic prediction equations (PE) from a training set of animals that covers a range of breeds and crosses including Angus, Murray Grey, Shorthorn, Hereford, Brahman, Belmont Red, Santa Gertrudis and Tropical Composite. This paper presents accuracies of genomically estimated breeding values (GEBV) that were calculated from these PE in the commercial pure-breed beef cattle seed stock sector. PE derived by the Beef CRC from multi-breed and pure-breed training populations were applied to genotyped Angus, Limousin and Brahman sires and young animals, but with no pure-breed Limousin in the training population. The accuracy of the resulting GEBV was assessed by their genetic correlation to their phenotypic target trait in a bi-variate REML approach that models GEBV as trait observations. Accuracies of most GEBV for Angus and Brahman were between 0.1 and 0.4, with accuracies for abattoir carcass traits generally greater than for live animal body composition traits and reproduction traits. Estimated accuracies greater than 0.5 were only observed for Brahman abattoir carcass traits and for Angus carcass rib fat. Averaged across traits within breeds, accuracies of GEBV were highest when PE from the pooled across-breed training population were used. However, for the Angus and Brahman breeds the difference in accuracy from using pure-breed PE was small. For the Limousin breed no reasonable results could be achieved for any trait. Although accuracies were generally low compared to published accuracies estimated within breeds, they are in line with those derived in other multi-breed populations. Thus PE developed by the Beef CRC can contribute to the implementation of genomic selection in

  4. Practices and Prospects of Super Hybrid Rice Breeding

    Institute of Scientific and Technical Information of China (English)

    2007-01-01

    The great progress in super rice breeding both in China and other countries has been made in recent years.However, there were three main problems in super rice breeding: 1) the super rice varieties were still rare; 2) most super rice varieties exhibited narrow adaptability; and 3) current breeding theories emphasized too much on the rice growth model, but they were unpractical in guidance for rice breeding. According to the authors' experience on the rice breeding, the breeding strategies including three steps (super parent breeding, super hybrid rice breeding and super hybrid rice seed production)were proposed, and the objectives of each step and the key technologies to achieve the goals were elucidated in detail. The super parent of hybrid rice should exhibit excellent performance in all agronomic traits, with the yield or sink capacity reached the level of the hybrid rice control in regional trials. The super hybrid rice combination should meet the following criteria: good rice quality, wide adaptation, lodging resistance, resistance to main insects and diseases, and the yield exceeded above 8%over the control varieties in the national and provincial regional trials. To achieve the goal, the technical strategies, such as selecting optimal combination of the parents, increasing selection pressure, paying more attention to harmony of ideal plant type, excellent physiological traits and all the agronomic traits, should be emphasized. The yield of seed production should reach 3.75 t/ha and 5.25 t/ha for the super hybrid rice combinations derived from early-season and middle-season types of male sterile lines, respectively. The main technologies for raising seed production yield included selecting optimum seed production site, using the male sterile line with large sink capacity and good outcrossing characteristics, and improving the amount of the pollen by intensive cultivation of the male parent. According to the technologies of the three-step breeding on super

  5. Gramene database: navigating plant comparative genomics resources

    Science.gov (United States)

    Gramene (http://www.gramene.org) is an online, open source, curated resource for plant comparative genomics and pathway analysis designed to support researchers working in plant genomics, breeding, evolutionary biology, system biology, and metabolic engineering. It exploits phylogenetic relationship...

  6. Engineered resistance against fungal plant pathogens

    NARCIS (Netherlands)

    Honée, G.

    1999-01-01

    Development of genetic engineering technology and molecular characterization of plant defense responses have provided strategies for controlling plant diseases additional to those based on chemical control or classical breeding programs. Most of these alternative strategies are based on the overprod

  7. 南繁条件下转基因大豆对根际土壤可培养微生物的影响%The Environmental Effect of Transgenic Soybean on the Rhizosphere Soil Culturable Microorganisms in the Plant Breeding Base of Hainan

    Institute of Scientific and Technical Information of China (English)

    杜伟; 黄启星; 左娇; 罗丰; 王旭初; 郭安平

    2012-01-01

    Taking Zhonghuang-13 soybean as the control, the influence of Roundup Ready (RR) soybean AG5601 on the rhizosphere microorganisms was studied in the Plant Breeding Base of Hainan. After 2 planting cycles' practice and experiment, it was found that the changes of bacteria, fungi, and actinomycetes were roughly with the same trends in rhizospheres oil of RRS and the control. Irregular changes of the RRS influence on rhizosphere soil microbes was found except that the number of fungi in the rhizosphere soil was obviously reduced by RRS (p<0.01) in 30 d to 100 d in the second planting cycle. The results would be useful for the safety assessment of GM soybeans at the Plant Breeding Base of Hainan.%以常规大豆品种中黄13为对照,研究了抗草甘膦转基因大豆AG5601对根际土壤可培养微生物的数量影响.经过大豆2个生长周期的研究发现:在相同时段内,转基因大豆AG5601和对照对根际土壤细菌、真菌和放线菌的数量变化影响趋势基本一致;除在第2生长周期的第30~100天(20100618~20100908)时转基因大豆极显著地抑制了根际土壤真菌数量(p<0.01)外,转基因大豆对根际土壤微生物数量的影响呈不规律变化;转基因大豆对根际土壤微生物有一定的影响,但无明显规律可循.此研究结果为在我国南繁地区开展转基因大豆AG5601安全评价提供数据支持.

  8. Experimental Investigation of Ternary Alloys for Fusion Breeding Blankets

    Energy Technology Data Exchange (ETDEWEB)

    Choi, B. William [Lawrence Livermore National Lab. (LLNL), Livermore, CA (United States); Chiu, Ing L. [Lawrence Livermore National Lab. (LLNL), Livermore, CA (United States)

    2015-10-26

    Future fusion power plants based on the deuterium-tritium (DT) fuel cycle will be required to breed the T fuel via neutron reactions with lithium, which will be incorporated in a breeding blanket that surrounds the fusion source. Recent work by LLNL proposed the used of liquid Li as the breeder in an inertial fusion energy (IFE) power plant. Subsequently, an LDRD was initiated to develop alternatives ternary alloy liquid metal breeders that have reduced chemical reactivity with water and air compared to pure Li. Part of the work plan was to experimentally investigate the phase diagrams of ternary alloys. Of particular interest was measurement of the melt temperature, which must be low enough to be compatible with the temperature limits of the steel used in the construction of the chamber and heat transfer system.

  9. Conservation priorities for Ethiopian sheep breeds combining threat status, breed merits and contributions to genetic diversity

    Directory of Open Access Journals (Sweden)

    Windig Jack J

    2008-07-01

    Full Text Available Abstract Prioritizing livestock breeds for conservation needs to incorporate both genetic and non-genetic aspects important for the survival of the breeds. Here, we apply a maximum-utility-strategy to prioritize 14 traditional Ethiopian sheep breeds based on their threat status, contributions to farmer livelihoods (current breed merits and contributions to genetic diversity. Contributions of the breeds to genetic diversity were quantified using Eding's marker-estimated kinship approaches. Non-genetic aspects included threats (e.g. low population size, low preferences by farmers and current merits (economic, ecological and cultural merits. Threat analysis identified eight of the 14 breeds as threatened. Analysis of current merits showed that sub-alpine and arid-lowland breeds contribute most to farmer livelihoods in comparison to other breeds. The highest contribution to the genetic diversity conserved was from the Simien breed. Simien showed high between-breed (low between-breed kinship = 0.04 as well as high within-breed diversity (low within-breed kinship = 0.09 and high HE = 0.73 and allelic richness = 6.83. We combined the results on threat status, current breed merits and contributions to genetic diversity to produce a ranking of the 14 breeds for conservation purposes. Our results balance the trade-offs between conserving breeds as insurance against future uncertainties and current sustainable utilization. The ranking of breeds provides a basis for conservation strategies for Ethiopian sheep and contributes to a regional or global conservation plan.

  10. Research Progress in Androgenesis and Haploid Breeding of Gramineous Forage and Turfgrass Plants%禾本科牧草和草坪草雄核发育与单倍体育种研究进展

    Institute of Scientific and Technical Information of China (English)

    赵永钦; 吴新新; 李蔚; 李仁; 史文君; 郭仰东

    2012-01-01

    禾本科牧草与草坪草在农业可持续发展、城市绿化和生态环境保护方面起着至关重要的作用.近年来,随着生物技术的发展,国内外在牧草及草坪草雄核发育与单倍体育种研究方面取得了较大进展.该文在归纳总结该领域研究成果的基础上,对影响禾本科牧草及草坪草雄核发育与单倍体育种的几个主要因素进行了探讨.大量研究结果表明,供试材料的基因型是影响培养效率的最主要因素.小孢子发育到单核中期至晚期时有利于提高培养效率.培养前花药经过低温和甘露醇等预处理不但可以提高愈伤组织的诱导效率,还可提高愈伤组织的质量.适宜的激素种类和配比也是影响培养成败的关键因素.同时,总结了雄核发育再生植株的倍性鉴定方法和加倍技术,对单倍体育种技术在禾本科牧草及草坪草育种中的应用前景进行了展望.%Gramineous forage and turfgrass are critical to sustainable agriculture and contribute extensively to urban landscaping and ecological protection. In recent years, with the rapid development of biotechnology, significant progress has been made in androgenesis and haploid breeding research of gramineous forage and turfgrasses. This review describes the development of androgenesis systems for gramineous forage and turfgrass and summarizes the latest progress of some important influencing factors on androgenesis and haploid breeding. The genotype of experimental materials is the main factor influencing androgenesis efficiency. The optimal stage for efficient androgenesis of microspore development is between middle and late uninucleate. The ratio and quality of callus induction were improved after anthers were pretreated with low temperature or mannitol. Suitable varieties and ratios of hormone are also the key factors in androgenesis. We summarize the methods of ploidy determination and techniques of chromosome doubling and point out prospects

  11. Breeding the oil palm (Elaeis guineensis Jacq.) for climate change

    OpenAIRE

    Rival Alain

    2017-01-01

    Breeding the oil palm (Elaeis guineensis Jacq.) for climate change requires multidisciplinary and collaborative research by nature: indeed – besides genetics and structural and functional genomics – almost all disciplines related to life sciences are involved. Research work also relies on the identification of genetic variation in the strategies of response to stress developed by the plant: this implies the exploration of resources provided by natural variation, germplasm collections, selecte...

  12. Native Pig and Chicken Breed Database: NPCDB.

    Science.gov (United States)

    Jeong, Hyeon-Soo; Kim, Dae-Won; Chun, Se-Yoon; Sung, Samsun; Kim, Hyeon-Jeong; Cho, Seoae; Kim, Heebal; Oh, Sung-Jong

    2014-10-01

    Indigenous (native) breeds of livestock have higher disease resistance and adaptation to the environment due to high genetic diversity. Even though their extinction rate is accelerated due to the increase of commercial breeds, natural disaster, and civil war, there is a lack of well-established databases for the native breeds. Thus, we constructed the native pig and chicken breed database (NPCDB) which integrates available information on the breeds from around the world. It is a nonprofit public database aimed to provide information on the genetic resources of indigenous pig and chicken breeds for their conservation. The NPCDB (http://npcdb.snu.ac.kr/) provides the phenotypic information and population size of each breed as well as its specific habitat. In addition, it provides information on the distribution of genetic resources across the country. The database will contribute to understanding of the breed's characteristics such as disease resistance and adaptation to environmental changes as well as the conservation of indigenous genetic resources.

  13. Resistance to Verticillium dahliae (Kleb.) in the strawberry breeding lines.

    Science.gov (United States)

    Zebrowska, J; Hortyński, J; Cholewa, T; Honcz, K

    2006-01-01

    Verticillium species are soil-borne fungi with worldwide distribution, causing vascular disease that results in severe yield and quality losses in fruit and nut crops, legumes, vegetables, forest trees, and woody and herbaceous ornamentals. Most crop diseases are caused by the two species Verticillium dahliae Klebahn and V. albo-atrum Reinke and Berthier, which differ in morphology, host range, and growth characteristics. The control of Verticillium spp. is especially difficult because they can survive in the soil as resting structures for several years. Cultivation of resistant plant material is the most effective method of the disease elimination. Resistance to Verticillium dahliae Kleb. was examined in the four strawberry breeding lines i.e.'Kent S1', 'Kent o.p.', 'Plena S1', 'Plena o.p'. The strawberry isolate of cv. 'Elsanta' no.1093 of Verticillium dahliae from Pathogen Gene Bank (Poland-Poznań) was used throughout this study. Seedlings of strawberry breeding lines were used for in vitro inoculation at stage of 4 leaves. Their roots were dipped for approximately 1 min in conidial suspensions (inoculum concentration--60 spores at 100x magnification in the microscopic field). Observations of disease symptoms were performed at 15, 30, 45, 60 and 75 days post inoculation. Extent of leaf chlorosis was rated on a scale of 0-4 in which: 0 no symptom. 1 up to 25% chlorotic leaves. 2 up to 50% chlorotic leaves. 3 up to 75% chlorotic leaves. 4 up to 100% chlorotic leaves. Plant response to in vitro inoculation of V. dahliae was different and depended on the breeding line. The most susceptible breeding line was 'Plena S1' and the most resistant was the line 'Kent o.p'. The line 'Kent S1' was more susceptible than the last one, but much more resistant than the line 'Plena o.p'. Seedlings without disease symptoms were observed in all examined lines at 15 and 30 days post inoculation At 45 days post inoculation no plant without disease symptoms was observed. Disease

  14. Selective breeding in organic dairy production

    NARCIS (Netherlands)

    Nauta, W.J.

    2009-01-01

    Organic dairy farming started to take off in the early 1990s, when the European Union laid down organic standards for animal production. Until now, however, only incidental steps have been taken towards organic breeding and organic farmers mainly use breeding stock from conventional breeding program

  15. Vision of breeding for organic agriculture

    NARCIS (Netherlands)

    Nauta, W.J.; Groen, A.; Roep, D.; Veerkamp, R.F.; Baars, T.

    2003-01-01

    Taking the current breeding situation as the starting point, a number of scenarios are described for each animal sector which could gradually lead to a system of breeding which is more organic both in its aims and in the chain-based approach. The naturalness of the breeding techniques is an

  16. Selective breeding in organic dairy production

    NARCIS (Netherlands)

    Nauta, W.J.

    2009-01-01

    Organic dairy farming started to take off in the early 1990s, when the European Union laid down organic standards for animal production. Until now, however, only incidental steps have been taken towards organic breeding and organic farmers mainly use breeding stock from conventional breeding program

  17. Selective breeding in organic dairy production

    NARCIS (Netherlands)

    Nauta, W.J.

    2009-01-01

    Organic dairy farming started to take off in the early 1990s, when the European Union laid down organic standards for animal production. Until now, however, only incidental steps have been taken towards organic breeding and organic farmers mainly use breeding stock from conventional breeding

  18. Grooming relationships between breeding females and adult group members in cooperatively breeding moustached tamarins (Saguinus mystax).

    Science.gov (United States)

    Löttker, Petra; Huck, Maren; Zinner, Dietmar P; Heymann, Eckhard W

    2007-10-01

    Grooming is the most common form of affiliative behavior in primates that apart from hygienic and hedonistic benefits offers important social benefits for the performing individuals. This study examined grooming behavior in a cooperatively breeding primate species, characterized by single female breeding per group, polyandrous matings, dizygotic twinning, delayed offspring dispersal, and intensive helping behavior. In this system, breeding females profit from the presence of helpers but also helpers profit from staying in a group and assisting in infant care due to the accumulation of direct and indirect fitness benefits. We examined grooming relationships of breeding females with three classes of partners (breeding males, potentially breeding males, (sub)adult non-breeding offspring) during three reproductive phases (post-partum ovarian inactivity, ovarian activity, pregnancy) in two groups of wild moustached tamarins (Saguinus mystax). We investigated whether grooming can be used to regulate group size by either "pay-for-help" or "pay-to-stay" mechanisms. Grooming of breeding females with breeding males and non-breeding offspring was more intense and more balanced than with potentially breeding males, and most grooming occurred during the breeding females' pregnancies. Grooming was skewed toward more investment by the breeding females with breeding males during the phases of ovarian activity, and with potentially breeding males during pregnancies. Our results suggest that grooming might be a mechanism used by female moustached tamarins to induce mate association with the breeding male, and to induce certain individuals to stay in the group and help with infant care.

  19. Emperor penguins breeding on iceshelves.

    Directory of Open Access Journals (Sweden)

    Peter T Fretwell

    Full Text Available We describe a new breeding behaviour discovered in emperor penguins; utilizing satellite and aerial-survey observations four emperor penguin breeding colonies have been recorded as existing on ice-shelves. Emperors have previously been considered as a sea-ice obligate species, with 44 of the 46 colonies located on sea-ice (the other two small colonies are on land. Of the colonies found on ice-shelves, two are newly discovered, and these have been recorded on shelves every season that they have been observed, the other two have been recorded both on ice-shelves and sea-ice in different breeding seasons. We conduct two analyses; the first using synthetic aperture radar data to assess why the largest of the four colonies, for which we have most data, locates sometimes on the shelf and sometimes on the sea-ice, and find that in years where the sea-ice forms late, the colony relocates onto the ice-shelf. The second analysis uses a number of environmental variables to test the habitat marginality of all emperor penguin breeding sites. We find that three of the four colonies reported in this study are in the most northerly, warmest conditions where sea-ice is often sub-optimal. The emperor penguin's reliance on sea-ice as a breeding platform coupled with recent concerns over changed sea-ice patterns consequent on regional warming, has led to their designation as "near threatened" in the IUCN red list. Current climate models predict that future loss of sea-ice around the Antarctic coastline will negatively impact emperor numbers; recent estimates suggest a halving of the population by 2052. The discovery of this new breeding behaviour at marginal sites could mitigate some of the consequences of sea-ice loss; potential benefits and whether these are permanent or temporary need to be considered and understood before further attempts are made to predict the population trajectory of this iconic species.

  20. Advances and Prospects in Breeding Japonica Rice for Super High Yield in the Northern China

    Institute of Scientific and Technical Information of China (English)

    CHEN Wen-fu; XU Zheng-jin; ZHANG Wen-zhong

    2007-01-01

    In this paper, advances and prospects in breeding japonica rice for super high yield in the northern China were analyzed comprehensively in terms of breeding theories, techniques and practices. The author holds that developing and spreading super rice is an important way to enhance the overall yielding ability of japonica rice and attaining immense expansion of rice production. After theories and technical guidelines for super rice breeding were formulated, which involved the creation of new plant morphology and strong hybrid vigor through crossing indica with japonica subspecies, the optimization of combination of desirable traits via multiple crossing or backcrossing, the assemblage of favorable genes and the integration of ideal plant morphology with the utilization of vigor-major breakthroughs have been made in conventional breeding of japonica super rice. A batch of new super rice varieties marked by superior rice quality and high disease resistance, such as Shennong 265, Shennong 606, and Jijing 88, etc., have been developed and released. In comparison with the advancement in conventional breeding of super rice, progress in hybrid japonica super rice breeding is slower because of climatic and ecological constraint in northern China. Therefore, solving the contradictions between vigor and growth duration, between yield and rice quality, and boosting vastly seed production are still serious challenges for breeders of hybrid japonica rice. Physiological and genetic problems in japonica super rice breeding are also discussed in this paper.

  1. Assortative mating and fragmentation within dog breeds

    Directory of Open Access Journals (Sweden)

    Hailer Frank

    2008-01-01

    Full Text Available Abstract Background There are around 400 internationally recognized dog breeds in the world today, with a remarkable diversity in size, shape, color and behavior. Breeds are considered to be uniform groups with similar physical characteristics, shaped by selection rooted in human preferences. This has led to a large genetic difference between breeds and a large extent of linkage disequilibrium within breeds. These characteristics are important for association mapping of candidate genes for diseases and therefore make dogs ideal models for gene mapping of human disorders. However, genetic uniformity within breeds may not always be the case. We studied patterns of genetic diversity within 164 poodles and compared it to 133 dogs from eight other breeds. Results Our analyses revealed strong population structure within poodles, with differences among some poodle groups as pronounced as those among other well-recognized breeds. Pedigree analysis going three generations back in time confirmed that subgroups within poodles result from assortative mating imposed by breed standards as well as breeder preferences. Matings have not taken place at random or within traditionally identified size classes in poodles. Instead, a novel set of five poodle groups was identified, defined by combinations of size and color, which is not officially recognized by the kennel clubs. Patterns of genetic diversity in other breeds suggest that assortative mating leading to fragmentation may be a common feature within many dog breeds. Conclusion The genetic structure observed in poodles is the result of local mating patterns, implying that breed fragmentation may be different in different countries. Such pronounced structuring within dog breeds can increase the power of association mapping studies, but also represents a serious problem if ignored. In dog breeding, individuals are selected on the basis of morphology, behaviour, working or show purposes, as well as geographic

  2. Assortative mating and fragmentation within dog breeds.

    Science.gov (United States)

    Björnerfeldt, Susanne; Hailer, Frank; Nord, Maria; Vilà, Carles

    2008-01-28

    There are around 400 internationally recognized dog breeds in the world today, with a remarkable diversity in size, shape, color and behavior. Breeds are considered to be uniform groups with similar physical characteristics, shaped by selection rooted in human preferences. This has led to a large genetic difference between breeds and a large extent of linkage disequilibrium within breeds. These characteristics are important for association mapping of candidate genes for diseases and therefore make dogs ideal models for gene mapping of human disorders. However, genetic uniformity within breeds may not always be the case. We studied patterns of genetic diversity within 164 poodles and compared it to 133 dogs from eight other breeds. Our analyses revealed strong population structure within poodles, with differences among some poodle groups as pronounced as those among other well-recognized breeds. Pedigree analysis going three generations back in time confirmed that subgroups within poodles result from assortative mating imposed by breed standards as well as breeder preferences. Matings have not taken place at random or within traditionally identified size classes in poodles. Instead, a novel set of five poodle groups was identified, defined by combinations of size and color, which is not officially recognized by the kennel clubs. Patterns of genetic diversity in other breeds suggest that assortative mating leading to fragmentation may be a common feature within many dog breeds. The genetic structure observed in poodles is the result of local mating patterns, implying that breed fragmentation may be different in different countries. Such pronounced structuring within dog breeds can increase the power of association mapping studies, but also represents a serious problem if ignored. In dog breeding, individuals are selected on the basis of morphology, behaviour, working or show purposes, as well as geographic population structure. The same processes which have

  3. Tomato early blight (Alternaria solani): the pathogen, genetics and breeding for resistance

    OpenAIRE

    Chaerani, R.; Voorrips, R. E.

    2006-01-01

    Alternaria solani causes diseases on foliage (early blight), basal stems of seedlings (collar rot), stems of adult plants (stem lesions), and fruits (fruit rot) of tomato. Early blight is the most destructive of these diseases and hence receives considerable attention in breeding. For over 60 years, breeding for early blight resistance has been practiced, but the development of cultivars with high levels of resistance has been hampered by the lack of sources of strong resistance in the cultiv...

  4. Future Prospects for Ascochyta Blight Resistance Breeding in Cool Season Food Legumes

    OpenAIRE

    Rubiales, D.; Fondevilla, S.

    2012-01-01

    Legume cultivation is strongly hampered by the occurrence of ascochyta blights. Strategies of control have been developed but only marginal successes achieved. Breeding for disease resistance is regarded the most cost efficient method of control. Significant genetic variation for disease resistance exists in most legume crops with numerous germplasm lines maintained, providing an excellent resource for plant breeders. Fast and reliable screening methods have been adjusted to fulfill breeding ...

  5. Breeding quinoa (Chenopodium quinoa Willd.)

    DEFF Research Database (Denmark)

    Zurita-Silva, Andrés; Fuentes, Francisco; Zamora, Pablo

    2014-01-01

    Quinoa (Chenopodium quinoa Willd.) originated in the Andean region of South America; this species is associated with exceptional grain nutritional quality and is highly valued for its ability to tolerate abiotic stresses. However, its introduction outside the Andes has yet to take off on a large...... scale. In the Andes, quinoa has until recently been marginally grown by small-scale Andean farmers, leading to minor interest in the crop from urban consumers and the industry. Quinoa breeding programs were not initiated until the 1960s in the Andes, and elsewhere from the 1970s onwards. New molecular...... tools available for the existing quinoa breeding programs, which are critically examined in this review, will enable us to tackle the limitations of allotetraploidy and genetic specificities. The recent progress, together with the declaration of "The International Year of the Quinoa" by the Food...

  6. Charge Breeding of Radioactive Ions

    CERN Document Server

    Wenander, F J C

    2013-01-01

    Charge breeding is a technique to increase the charge state of ions, in many cases radioactive ions. The singly charged radioactive ions, produced in an isotope separator on-line facility, and extracted with a low kinetic energy of some tens of keV, are injected into a charge breeder, where the charge state is increased to Q. The transformed ions are either directed towards a dedicated experiment requiring highly charged ions, or post-accelerated to higher beam energies. In this paper the physics processes involved in the production of highly charged ions will be introduced, and the injection and extraction beam parameters of the charge breeder defined. A description of the three main charge-breeding methods is given, namely: electron stripping in gas jet or foil; external ion injection into an electron-beam ion source/trap (EBIS/T); and external ion injection into an electron cyclotron resonance ion source (ECRIS). In addition, some preparatory devices for charge breeding and practical beam delivery aspects ...

  7. TILLING in forage grasses for gene discovery and breeding improvement.

    Science.gov (United States)

    Manzanares, Chloe; Yates, Steven; Ruckle, Michael; Nay, Michelle; Studer, Bruno

    2016-09-25

    Mutation breeding has a long-standing history and in some major crop species, many of the most important cultivars have their origin in germplasm generated by mutation induction. For almost two decades, methods for TILLING (Targeting Induced Local Lesions IN Genomes) have been established in model plant species such as Arabidopsis (Arabidopsis thaliana L.), enabling the functional analysis of genes. Recent advances in mutation detection by second generation sequencing technology have brought its utility to major crop species. However, it has remained difficult to apply similar approaches in forage and turf grasses, mainly due to their outbreeding nature maintained by an efficient self-incompatibility system. Starting with a description of the extent to which traditional mutagenesis methods have contributed to crop yield increase in the past, this review focuses on technological approaches to implement TILLING-based strategies for the improvement of forage grass breeding through forward and reverse genetics. We present first results from TILLING in allogamous forage grasses for traits such as stress tolerance and evaluate prospects for rapid implementation of beneficial alleles to forage grass breeding. In conclusion, large-scale induced mutation resources, used for forward genetic screens, constitute a valuable tool to increase the genetic diversity for breeding and can be generated with relatively small investments in forage grasses. Furthermore, large libraries of sequenced mutations can be readily established, providing enhanced opportunities to discover mutations in genes controlling traits of agricultural importance and to study gene functions by reverse genetics.

  8. Breeding to Optimize Agriculture in a Changing World

    Institute of Scientific and Technical Information of China (English)

    Jiankang; Wang; Jose; Luis; Araus; Jianmin; Wan

    2015-01-01

    Breeding to Optimize Chinese Agriculture(OPTICHINA) was a three-year EU–China project launched in June of 2011. As designed, the project acted as a new strategic model to reinforce systematic cooperation on agricultural research between Europe and China. The OPTICHINA International Conference "Breeding to Optimize Agriculture in a Changing World" was held in Beijing, May 26–29, 2014. The conference included six thematic areas:(1) defining and protecting the yield potential of traits and genes;(2) high-throughput precision phenotyping in the field;(3) molecular technologies in modern breeding;(4) plant ideotype;(5) data analysis,data management, and bioinformatics; and(6) national challenges and opportunities for China. The 10 articles collected in this special issue represent key contributions and topics of this conference. This editorial provides a brief introduction to the OPTICHINA project, followed by the main scientific points of articles published in this special issue. Finally, outcomes from a brainstorming discussion at the end of the conference are summarized, representing the authors’ opinions on trends in breeding for a changing world.

  9. Breeding to Optimize Agriculture in a Changing World

    Institute of Scientific and Technical Information of China (English)

    Jiankang Wanga; Jose Luis Arausb; Jianmin Wana

    2015-01-01

    Breeding to Optimize Chinese Agriculture (OPTICHINA) was a three-year EU–China project launched in June of 2011. As designed, the project acted as a new strategic model to reinforce systematic cooperation on agricultural research between Europe and China. The OPTICHINA International Conference“Breeding to Optimize Agriculture in a Changing World”was held in Beijing, May 26–29, 2014. The conference included six thematic areas: (1) defining and protecting the yield potential of traits and genes;(2) high-throughput precision phenotyping in the field;(3) molecular technologies in modern breeding;(4) plant ideotype;(5) data analysis, data management, and bioinformatics; and (6) national challenges and opportunities for China. The 10 articles collected in this special issue represent key contributions and topics of this conference. This editorial provides a brief introduction to the OPTICHINA project, followed by the main scientific points of articles published in this special issue. Finally, outcomes from a brainstorming discussion at the end of the conference are summarized, representing the authors' opinions on trends in breeding for a changing world.

  10. Apricot Breeding at the Faculty of Horticulture in Lednice

    Directory of Open Access Journals (Sweden)

    Boris Krška

    2016-04-01

    Full Text Available The aim of the apricot-breeding program in the Horticultural Faculty in Lednice, that has been developed since 1981, is to obtain new adaptable cultivars, which combine most of the valuable biological traits. Standard breeding techniques, such as crossing by emasculation and hand pollination, self-pollination and open pollination, were employed. A total of 1.154 crossings were produced from more than 110 different parents. So far more than 20,000 seedlings have been obtained, of which about 13,000 have already been evaluated. The most interesting selections were grafted and planted in trial orchards (we now have more than 650 elite genotypes. Ten of these have already been registered, and further promising new hybrids have been submitted for registration and law right protection (Betinka, Candela, Sophia and Adriana. The basic prerequisite for the initiation of the breeding program was a large collection of genetic resources, established and gradually supplemented since the 1970s. At the present time, we preserve and manage more than 300 accessions of apricot trees. In the frame of the descriptive work of the genetic resources and in order to use in breeding, a collection of apricots has been evaluated. We selected the genotypes and characters relating to an increased level of adaptation to the environment.

  11. Plant Protein Inhibitors of Enzymes: Their Role in Animal Nutrition and Plant Defence.

    Science.gov (United States)

    Richardson, Michael

    1981-01-01

    Current information and research related to plant protein inhibitors of enzymes are reviewed, including potential uses of the inhibitors for medical treatment and for breeding plant varieties with greater resistance to insects. (DC)

  12. Genetic diversity of eleven European pig breeds

    Directory of Open Access Journals (Sweden)

    Foulley Jean-Louis

    2000-03-01

    Full Text Available Abstract A set of eleven pig breeds originating from six European countries, and including a small sample of wild pigs, was chosen for this study of genetic diversity. Diversity was evaluated on the basis of 18 microsatellite markers typed over a total of 483 DNA samples collected. Average breed heterozygosity varied from 0.35 to 0.60. Genotypic frequencies generally agreed with Hardy-Weinberg expectations, apart from the German Landrace and Schwäbisch-Hällisches breeds, which showed significantly reduced heterozygosity. Breed differentiation was significant as shown by the high among-breed fixation index (overall FST = 0.27, and confirmed by the clustering based on the genetic distances between individuals, which grouped essentially all individuals in 11 clusters corresponding to the 11 breeds. The genetic distances between breeds were first used to construct phylogenetic trees. The trees indicated that a genetic drift model might explain the divergence of the two German breeds, but no reliable phylogeny could be inferred among the remaining breeds. The same distances were also used to measure the global diversity of the set of breeds considered, and to evaluate the marginal loss of diversity attached to each breed. In that respect, the French Basque breed appeared to be the most "unique" in the set considered. This study, which remains to be extended to a larger set of European breeds, indicates that using genetic distances between breeds of farm animals in a classical taxonomic approach may not give clear resolution, but points to their usefulness in a prospective evaluation of diversity.

  13. Breeding without breeding: is a complete pedigree necessary for efficient breeding?

    Directory of Open Access Journals (Sweden)

    Yousry A El-Kassaby

    Full Text Available Complete pedigree information is a prerequisite for modern breeding and the ranking of parents and offspring for selection and deployment decisions. DNA fingerprinting and pedigree reconstruction can substitute for artificial matings, by allowing parentage delineation of naturally produced offspring. Here, we report on the efficacy of a breeding concept called "Breeding without Breeding" (BwB that circumvents artificial matings, focusing instead on a subset of randomly sampled, maternally known but paternally unknown offspring to delineate their paternal parentage. We then generate the information needed to rank those offspring and their paternal parents, using a combination of complete (full-sib: FS and incomplete (half-sib: HS analyses of the constructed pedigrees. Using a random sample of wind-pollinated offspring from 15 females (seed donors, growing in a 41-parent western larch population, BwB is evaluated and compared to two commonly used testing methods that rely on either incomplete (maternal half-sib, open-pollinated: OP or complete (FS pedigree designs. BwB produced results superior to those from the incomplete design and virtually identical to those from the complete pedigree methods. The combined use of complete and incomplete pedigree information permitted evaluating all parents, both maternal and paternal, as well as all offspring, a result that could not have been accomplished with either the OP or FS methods alone. We also discuss the optimum experimental setting, in terms of the proportion of fingerprinted offspring, the size of the assembled maternal and paternal half-sib families, the role of external gene flow, and selfing, as well as the number of parents that could be realistically tested with BwB.

  14. Glucosinolate metabolism, functionality and breeding for the improvement of Brassicaceae vegetables.

    Science.gov (United States)

    Ishida, Masahiko; Hara, Masakazu; Fukino, Nobuko; Kakizaki, Tomohiro; Morimitsu, Yasujiro

    2014-05-01

    Unique secondary metabolites, glucosinolates (S-glucopyranosyl thiohydroximates), are naturally occurring S-linked glucosides found mainly in Brassicaceae plants. They are enzymatically hydrolyzed to produce sulfate ions, D-glucose, and characteristic degradation products such as isothiocyanates. The functions of glucosinolates in the plants remain unclear, but isothiocyanates possessing a pungent or irritating taste and odor might be associated with plant defense from microbes. Isothiocyanates have been studied extensively in experimental in vitro and in vivo carcinogenesis models for their cancer chemopreventive properties. The beneficial isothiocyanates, glucosinolates that are functional for supporting human health, have received attention from many scientists studying plant breeding, plant physiology, plant genetics, and food functionality. This review presents a summary of recent topics related with glucosinolates in the Brassica family, along with a summary of the chemicals, metabolism, and genes of glucosinolates in Brassicaceae. The bioavailabilities of isothiocyanates from certain functional glucosinolates and the importance of breeding will be described with emphasis on glucosinolates.

  15. Breeding schemes in reindeer husbandry

    Directory of Open Access Journals (Sweden)

    Lars Rönnegård

    2003-04-01

    Full Text Available The objective of the paper was to investigate annual genetic gain from selection (G, and the influence of selection on the inbreeding effective population size (Ne, for different possible breeding schemes within a reindeer herding district. The breeding schemes were analysed for different proportions of the population within a herding district included in the selection programme. Two different breeding schemes were analysed: an open nucleus scheme where males mix and mate between owner flocks, and a closed nucleus scheme where the males in non-selected owner flocks are culled to maximise G in the whole population. The theory of expected long-term genetic contributions was used and maternal effects were included in the analyses. Realistic parameter values were used for the population, modelled with 5000 reindeer in the population and a sex ratio of 14 adult females per male. The standard deviation of calf weights was 4.1 kg. Four different situations were explored and the results showed: 1. When the population was randomly culled, Ne equalled 2400. 2. When the whole population was selected on calf weights, Ne equalled 1700 and the total annual genetic gain (direct + maternal in calf weight was 0.42 kg. 3. For the open nucleus scheme, G increased monotonically from 0 to 0.42 kg as the proportion of the population included in the selection programme increased from 0 to 1.0, and Ne decreased correspondingly from 2400 to 1700. 4. In the closed nucleus scheme the lowest value of Ne was 1300. For a given proportion of the population included in the selection programme, the difference in G between a closed nucleus scheme and an open one was up to 0.13 kg. We conclude that for mass selection based on calf weights in herding districts with 2000 animals or more, there are no risks of inbreeding effects caused by selection.

  16. Genomic analyses provide insights into the history of tomato breeding.

    Science.gov (United States)

    Lin, Tao; Zhu, Guangtao; Zhang, Junhong; Xu, Xiangyang; Yu, Qinghui; Zheng, Zheng; Zhang, Zhonghua; Lun, Yaoyao; Li, Shuai; Wang, Xiaoxuan; Huang, Zejun; Li, Junming; Zhang, Chunzhi; Wang, Taotao; Zhang, Yuyang; Wang, Aoxue; Zhang, Yancong; Lin, Kui; Li, Chuanyou; Xiong, Guosheng; Xue, Yongbiao; Mazzucato, Andrea; Causse, Mathilde; Fei, Zhangjun; Giovannoni, James J; Chetelat, Roger T; Zamir, Dani; Städler, Thomas; Li, Jingfu; Ye, Zhibiao; Du, Yongchen; Huang, Sanwen

    2014-11-01

    The histories of crop domestication and breeding are recorded in genomes. Although tomato is a model species for plant biology and breeding, the nature of human selection that altered its genome remains largely unknown. Here we report a comprehensive analysis of tomato evolution based on the genome sequences of 360 accessions. We provide evidence that domestication and improvement focused on two independent sets of quantitative trait loci (QTLs), resulting in modern tomato fruit ∼100 times larger than its ancestor. Furthermore, we discovered a major genomic signature for modern processing tomatoes, identified the causative variants that confer pink fruit color and precisely visualized the linkage drag associated with wild introgressions. This study outlines the accomplishments as well as the costs of historical selection and provides molecular insights toward further improvement.

  17. Genomic prediction in a breeding program of perennial ryegrass

    DEFF Research Database (Denmark)

    Fé, Dario; Ashraf, Bilal; Greve-Pedersen, Morten

    2015-01-01

    We present a genomic selection study performed on 1918 rye grass families (Lolium perenne L.), which were derived from a commercial breeding program at DLF-Trifolium, Denmark. Phenotypes were recorded on standard plots, across 13 years and in 6 different countries. Variants were identified...... this set. Estimated Breeding Value and prediction accuracies were calculated trough two different cross-validation schemes: (i) k-fold (k=10); (ii) leaving out one parent combination at the time, in order to test for accuracy of predicting new families. Accuracies ranged between 0.56 and 0.97 for scheme (i....... A larger set of 1791 F2s were used as training set to predict EBVs of 127 synthetic families (originated from poly-crosses between 5-11 single plants) for heading date and crown rust resistance. Prediction accuracies were 0.93 and 0.57 respectively. Results clearly demonstrate considerable potential...

  18. Molecular classification of Maize cytoplasms in a breeding program

    Directory of Open Access Journals (Sweden)

    Colombo. N * , Presello, D.A. , Kandus M. , G.E. Eyherabide and J.C. Salerno

    2012-06-01

    Full Text Available Cytoplasmic male sterility (CMS is maternally inherited in most of higher plants species. Together with nuclear restorer genes (Rf, CMS cytoplasms contribute significantly to the efficient production of hybrid seed. Three main types of male sterile cytoplasms are known in maize: T, S and C, which can be distinguished by crossing with specific restorer lines. Recently, PCR markers have been developed allowing the identification of different cytoplasms quickly and accurately. Our objective was to classify the cytoplasm type of maize inbred lines used in our breeding program and F1s obtained from crosses between CMS lines and elite maize lines using PCR multiplex. A multiplex PCR protocol was optimized for our conditions. We obtained the molecular classification of the analyzed cytoplasms. The optimized protocol is a valuable tool to trace male sterile cytoplasms and determine hybrid seed purity in our maize breeding program.

  19. Neural networks for predicting breeding values and genetic gains

    Directory of Open Access Journals (Sweden)

    Gabi Nunes Silva

    2014-12-01

    Full Text Available Analysis using Artificial Neural Networks has been described as an approach in the decision-making process that, although incipient, has been reported as presenting high potential for use in animal and plant breeding. In this study, we introduce the procedure of using the expanded data set for training the network. Wealso proposed using statistical parameters to estimate the breeding value of genotypes in simulated scenarios, in addition to the mean phenotypic value in a feed-forward back propagation multilayer perceptron network. After evaluating artificial neural network configurations, our results showed its superiority to estimates based on linear models, as well as its applicability in the genetic value prediction process. The results further indicated the good generalization performance of the neural network model in several additional validation experiments.

  20. Cacao breeding in Bahia, Brazil - strategies and results

    Directory of Open Access Journals (Sweden)

    Uilson Vanderlei Lopes

    2011-01-01

    Full Text Available Cacao was introduced in Bahia in 1756, becoming later the largest producer state in the country. In order to supportthe planting of cacao in the region, a breeding program was established by CEPEC at the beginning of the 1970s. For a long time,the program consisted in testing new hybrids (full-sibs and releasing a mixture of the best ones to farmers. Lately, particularly afterthe witches´ broom arrival in the region, in 1989, recurrent breeding strategies were implemented, aiming mainly the developmentof clones. From 1993 to 2010, more than 500 progenies, accumulating 30 thousand trees, were developed by crossing many parentswith resistance to witches´ broom, high yield and other traits. In this period, more than 500 clones were put in trials and 39 clonesand 3 hybrids were released to farmers. In this paper the strategies and results achieved by the program are reviewed. Overall theprogram has good interface with pathology and genomic programs.

  1. Development of somatic hybrids Solanum × michoacanum Bitter. (Rydb.) (+) S. tuberosum L. and autofused 4x S. × michoacanum plants as potential sources of late blight resistance for potato breeding.

    Science.gov (United States)

    Smyda, P; Jakuczun, H; Dębski, K; Sliwka, J; Thieme, R; Nachtigall, M; Wasilewicz-Flis, I; Zimnoch-Guzowska, E

    2013-08-01

    Phytophthora infestans resistant somatic hybrids of S. × michoacanum (+) S. tuberosum and autofused 4 x S. × michoacanum were obtained. Our material is promising to introgress resistance from S. × michoacanum into cultivated potato background. Solanum × michoacanum (Bitter.) Rydb. (mch) is a wild diploid (2n = 2x = 24) potato species derived from spontaneous cross of S. bulbocastanum and S. pinnatisectum. This hybrid is a 1 EBN (endosperm balance number) species and can cross effectively only with other 1 EBN species. Plants of mch are resistant to Phytophthora infestans (Mont) de Bary. To introgress late blight resistance genes from mch into S. tuberosum (tbr), genepool somatic hybridization between mch and susceptible diploid potato clones (2n = 2x = 24) or potato cultivar Rywal (2n = 4x = 48) was performed. In total 18,775 calli were obtained from postfusion products from which 1,482 formed shoots. The Simple Sequence Repeat (SSR), Cleaved Amplified Polymorphic Sequences (CAPS) and Random Amplified Polymorphic DNA (RAPD) analyses confirmed hybrid nature of 228 plants and 116 autofused 4x mch. After evaluation of morphological features, flowering, pollen stainability, tuberization and ploidy level, 118 somatic hybrids and 116 autofused 4x mch were tested for late blight resistance using the detached leaf assay. After two seasons of testing three somatic hybrids and 109 4x mch were resistant. Resistant forms have adequate pollen stainability for use in crossing programme and are a promising material useful for introgression resistance from mch into the cultivated potato background.

  2. Variation in Adult Plant Phenotypes and Partitioning among Seed and Stem-Borne Roots across Brachypodium distachyon Accessions to Exploit in Breeding Cereals for Well-Watered and Drought Environments.

    Science.gov (United States)

    Chochois, Vincent; Vogel, John P; Rebetzke, Gregory J; Watt, Michelle

    2015-07-01

    Seedling roots enable plant establishment. Their small phenotypes are measured routinely. Adult root systems are relevant to yield and efficiency, but phenotyping is challenging. Root length exceeds the volume of most pots. Field studies measure partial adult root systems through coring or use seedling roots as adult surrogates. Here, we phenotyped 79 diverse lines of the small grass model Brachypodium distachyon to adults in 50-cm-long tubes of soil with irrigation; a subset of 16 lines was droughted. Variation was large (total biomass, ×8; total root length [TRL], ×10; and root mass ratio, ×6), repeatable, and attributable to genetic factors (heritabilities ranged from approximately 50% for root growth to 82% for partitioning phenotypes). Lines were dissected into seed-borne tissues (stem and primary seminal axile roots) and stem-borne tissues (tillers and coleoptile and leaf node axile roots) plus branch roots. All lines developed one seminal root that varied, with branch roots, from 31% to 90% of TRL in the well-watered condition. With drought, 100% of TRL was seminal, regardless of line because nodal roots were almost always inhibited in drying topsoil. Irrigation stimulated nodal roots depending on genotype. Shoot size and tillers correlated positively with roots with irrigation, but partitioning depended on genotype and was plastic with drought. Adult root systems of B. distachyon have genetic variation to exploit to increase cereal yields through genes associated with partitioning among roots and their responsiveness to irrigation. Whole-plant phenotypes could enhance gain for droughted environments because root and shoot traits are coselected.

  3. Breeding for behavioural change in farm animails

    DEFF Research Database (Denmark)

    Sandøe, Peter; D'eath, RB; Lawrence, AB

    2009-01-01

    examples, such as breeding for good maternal behaviour, could enhance welfare, production and naturalness, although dilemmas emerge where improved welfare could result from breeding away from natural behaviour. Selection against certain behaviours may carry a risk of creating animals which are generally......In farm animal breeding, behavioural traits are rarely included in selection programmes despite their potential to improve animal production and welfare. Breeding goals have been broadened beyond production traits in most farm animal species to include health and functional traits......, and opportunities exist to increase the inclusion of behaviour in breeding indices. On a technical level, breeding for behaviour presents a number of particular challenges compared to physical traits. It is much more difficult and time-consuming to directly measure behaviour in a consistent and reliable manner...

  4. Comparative analysis of traditional and modern apricot breeding programs: A case of study with Spanish and Tunisian apricot breeding germplasm

    Energy Technology Data Exchange (ETDEWEB)

    Batnini, M.A.; Krichen, L.; Bourguiba, H.; Trifi-Farah, N.; Ruiz, D.; Martínez-Gómez, P.; Rubio, M.

    2016-11-01

    Traditional plant breeding is based on the observation of variation and the selection of the best phenotypes, whereas modern breeding is characterised by the use of controlled mating and the selection of descendants using molecular markers. In this work, a comparative analysis of genetic diversity in a traditional (Tunisian) and a modern (Spanish) apricot breeding programme was performed at the phenotypic and molecular level using simple sequence repeat (SSR) markers. Seven phenotypic traits were evaluated in 42 Tunisian apricot accessions and 30 genotypes from the Spanish apricot programme. In addition, 20 SSR markers previously described as linked to specific phenotypic traits were assayed. Results showed that modern breeding using controlled crosses increases the size of the fruit. The fruit weight average observed in the Tunisian cultivars was of 20.15 g. In the case of traditional Spanish cultivars the average weight was 47.12 g, whereas the average weight of the other progenitors from France, USA and South Africa was 72.85 g. Finally, in the new releases from the CEBAS-CSIC breeding programme, the average weight was 72.82 g. In addition, modern bred cultivars incorporate desirable traits such as self-compatibility and firmness. Cluster and structural analysis based on SSR data clearly differentiates the genotypes according to their geographic origin and pedigree. Finally, results showed an association between some alleles of PaCITA7 and UDP96003 SSR markers with apricot fruit weight, one allele of UDAp407 marker with fruit firmness and one allele of UDP98406 marker with fruit ripening. (Author)

  5. Breeding of speciality maize for industrial purposes

    OpenAIRE

    2010-01-01

    The breeding programme on speciality maize with specific traits was established at the Maize Research Institute, Zemun Polje, several decades ago. The initial material was collected, new methods applying to breeding of speciality maize, i.e. popping maize, sweet maize and white-seeded maize, were introduced. The aim was to enhance and improve variability of the initial material for breeding these three types of maize. Then, inbred lines of good combining abilities were developed and used as c...

  6. Development Of Space Breeding In China

    Institute of Scientific and Technical Information of China (English)

    Liu Luxiang

    2009-01-01

    @@ Space breeding provides a new technical platform for Chinese agricaltural scientists to explore the mechanism of crop mutation induced during spaceflight and breeds new varieties of crops. It is important for China to develop the space breeding industry,maintain China's lead position in this field,serve agricultural production better,promote China's sustainable and healthy agricultural development,and ensure national food safety.

  7. New report on the bionomics of Coquillettidia venezuelensis in temporary breeding sites (Diptera: Culicidae

    Directory of Open Access Journals (Sweden)

    Jeronimo Alencar

    2011-04-01

    Full Text Available INTRODUCTION: Findings of immature forms of Coquillettidia venezuelensis in temporary breeding sites, without the presence of aquatic plants or other submerged plant tissue are reported. METHODS: A systematic scooping technique to collect specimens was used at the breeding site. RESULTS: Immature forms of Coquillettidia venezuelensis, Anopheles rangeli, An. evansae and Culex sp. were collected from areas of the hydroelectric power station of São Salvador, State of Goiás. CONCLUSIONS This is a novel finding relating to the bioecology of Cq. venezuelensis, a species of medical interest that has been found naturally infected with arboviruses, including Oropouche and West Nile virus.

  8. The Breeding Bird Survey, 1966

    Science.gov (United States)

    Robbins, C.S.; Van Velzen, W.T.

    1967-01-01

    A Breeding Bird Survey of a large section on North America was conducted during June 1966. Cooperators ran a total of 585 Survey routes in 26 eastern States and 4 Canadian Provinces. Future coverage of established routes will enable changes in the abundance of North American breeding birds to be measured. Routes are selected at random on the basis of one-degree blocks of latitude and longitude. Each 241/2-mile route, with 3-minute stops spaced one-half mile apart, is driven by automobile. All birds heard or seen at the stops are recorded on special forms and the data are then transferred to machine punch cards. The average number of birds per route is tabulated by State, along with the total number of each species and the percent of routes and stops upon which they were recorded. Maps are presented showing the range and abundance of selected species. Also, a year-to-year comparison is made of populations of selected species on Maryland routes in 1965 and 1966.

  9. Molecular tools for breeding basidiomycetes.

    Science.gov (United States)

    Ramírez, L; Larraya, L M; Pisabarro, A G

    2000-09-01

    The industrial production of edible basidiomycetes is increasing every year as a response to the increasing public demand of them because of their nutritional properties. About a dozen of fungal species can be currently produced for food with sound industrial and economic bases. Notwithstanding, this production is threatened by biotic and abiotic factors that make it necessary to improve the fungal strains currently used in industry. Breeding of edible basidiomycetes, however, has been mainly empirical and slow since the genetic tools useful in the selection of the new genetic material to be introduced in the commercial strains have not been developed for these fungi as it was for other organisms. In this review we will discuss the main genetic factors that should be considered to develop breeding approaches and tools for higher basidiomycetes. These factors are (i) the genetic system controlling fungal mating; (ii) the genomic structure and organisation of these fungi; and (iii) the identification of genes involved in the control of quantitative traits. We will discuss the weight of these factors using the oyster mushroom Pleurotus ostreatus as a model organism for most of the edible fungi cultivated industrially.

  10. CLASSICAL AND MOLECULAR CYTOGENETIC STUDIES FOR BREEDING AND SELECTION OF TULIPS

    Directory of Open Access Journals (Sweden)

    Aurel Popescu

    2012-12-01

    Full Text Available Due to their extreme popularity as fresh cut flowers and garden plants, and being used extensively for landscaping, tulips undergone a continuous process of selective breeding. For almost nine decades, classical cytogenetic studies, mainly the chromosome counts, have been an important part in the breeding programme for polyploid tulips. The efficiency of breeding is greatly aided by a thorough knowledge of the occurrence of polyploidy in the plant material. While the traditional cytogenetic approaches are still highly useful in selecting polyploids and aneuploids arising from crosses involving (most often parents of different ploidy or from the material subjected to ploidy manipulation, the new strategies for inducing polyploidy in tulips, either in vivo or in vitro, and advances in molecular cytogenetics are expected to allow a significant increase in breeding efficiency. Together with the shortening of breeding cycle, major genetic improvements could be made for specific traits. In this we review the development of cytogenetic studies in tulips, and the most relevant achievements so far, providing an overview of what we consider to be valuable tools for the processes of selective breeding .

  11. Breeding without Breeding: Is a Complete Pedigree Necessary for Efficient Breeding?

    Science.gov (United States)

    El-Kassaby, Yousry A.; Cappa, Eduardo P.; Liewlaksaneeyanawin, Cherdsak; Klápště, Jaroslav; Lstibůrek, Milan

    2011-01-01

    Complete pedigree information is a prerequisite for modern breeding and the ranking of parents and offspring for selection and deployment decisions. DNA fingerprinting and pedigree reconstruction can substitute for artificial matings, by allowing parentage delineation of naturally produced offspring. Here, we report on the efficacy of a breeding concept called “Breeding without Breeding” (BwB) that circumvents artificial matings, focusing instead on a subset of randomly sampled, maternally known but paternally unknown offspring to delineate their paternal parentage. We then generate the information needed to rank those offspring and their paternal parents, using a combination of complete (full-sib: FS) and incomplete (half-sib: HS) analyses of the constructed pedigrees. Using a random sample of wind-pollinated offspring from 15 females (seed donors), growing in a 41-parent western larch population, BwB is evaluated and compared to two commonly used testing methods that rely on either incomplete (maternal half-sib, open-pollinated: OP) or complete (FS) pedigree designs. BwB produced results superior to those from the incomplete design and virtually identical to those from the complete pedigree methods. The combined use of complete and incomplete pedigree information permitted evaluating all parents, both maternal and paternal, as well as all offspring, a result that could not have been accomplished with either the OP or FS methods alone. We also discuss the optimum experimental setting, in terms of the proportion of fingerprinted offspring, the size of the assembled maternal and paternal half-sib families, the role of external gene flow, and selfing, as well as the number of parents that could be realistically tested with BwB. PMID:21991342

  12. Chemical classification of cattle. 1. Breed groups.

    Science.gov (United States)

    Baker, C M; Manwell, C

    1980-01-01

    From approximately 1000 papers with data on protein polymorphism in some 216 breeds of cattle, 10 polymorphic proteins were compared in means and variances of gene frequencies (arcsin p 1/2) for ten well-recognized breed groups for 196 of the breeds. The polymorphic proteins were alpha-lactalbumin, beta-lactoglobulin, caseins (alpha s1, beta and chi), serum albumin, transferrin, haemoglobin, amylase I and carbonic anhydrase II. The breed groups were North European, Pied Lowland, European Red brachyceros, Channel Island brachyceros, Upland brachyceros, primigenius-brachyceros mixed, primigenius, Indian Zebu, African Humped (with Zebu admixture), and African Humped (Sanga). The coherence within groups and the differences between groups are often impressive. Only carbonic anhydrase II fails to differentiate at least some of the major breed groups. In some cases paradoxical distributions of rare genetic variants can be explained by a more detailed inspection of breed history. The chemical data support the morphological and geographical divisions of cattle into major breed groups. There are three distinct but related brachyceros groups; for some polymorphisms the two Channel Island breeds, the Jersey and the Guernsey, are quite divergent. Although some authorities have considered the Pied Lowland as primigenius, it is a very distinct breed group.

  13. The productivity of various pure breed and cross breed of imported pigs during lactation period

    Directory of Open Access Journals (Sweden)

    Djamuara Aritonang

    2001-03-01

    Full Text Available A study has been conducted to evaluate the productivity of pure breeds and cross breeds of imported pigs. Sixteen strains of pigs with five best sows were selected based on litter size and birth weight on the second parity. The results of the study showed that the pure breed performance was better than the cross breeds, as shown by the litter size, birth and weaned weight, less mortality, better mothering ability and better feed efficiency. Between pure breed, the Landrace and Yorkshire were better than other sows and between the cross breed, the LH and YL performed better than other crossbreeds. It is recommended that the pure breed especially Landrace and Yorkshire and LH and YL of cross breed are better than others

  14. Not only emerging technologies are at risk: The case of mutation breeding

    DEFF Research Database (Denmark)

    Hagemann, Kit S.; Scholderer, Joachim

    2007-01-01

    plants. Unlike crop cultivars developed by newer techniques such as genetic engineering, mutation-bred cultivars are not subject to special types of horizontal regulation in any UN country. Based on representative survey data (N = 1000), public attitudes towards mutation breeding were compared....... One technology where such a latent crisis potential has often been suspected is mutation breeding. Mutation breeding is a standard technique in the development of new crop cultivars, known since the 1930s, typically involving the use of ionizing radiation to induce alterations in the genomes of crop...... with attitudes towards several other agricultural and food biotechnologies in terms of evaluative extremity, strength, and structure. Among the technologies included in the survey, mutation breeding was by far the most negatively evaluated one (substantially more so than genetic engineering). At the same time...

  15. Are we ready for back-to-nature crop breeding?

    Science.gov (United States)

    Palmgren, Michael G; Edenbrandt, Anna Kristina; Vedel, Suzanne Elizabeth; Andersen, Martin Marchman; Landes, Xavier; Østerberg, Jeppe Thulin; Falhof, Janus; Olsen, Lene Irene; Christensen, Søren Brøgger; Sandøe, Peter; Gamborg, Christian; Kappel, Klemens; Thorsen, Bo Jellesmark; Pagh, Peter

    2015-03-01

    Sustainable agriculture in response to increasing demands for food depends on development of high-yielding crops with high nutritional value that require minimal intervention during growth. To date, the focus has been on changing plants by introducing genes that impart new properties, which the plants and their ancestors never possessed. By contrast, we suggest another potentially beneficial and perhaps less controversial strategy that modern plant biotechnology may adopt. This approach, which broadens earlier approaches to reverse breeding, aims to furnish crops with lost properties that their ancestors once possessed in order to tolerate adverse environmental conditions. What molecular techniques are available for implementing such rewilding? Are the strategies legally, socially, economically, and ethically feasible? These are the questions addressed in this review.

  16. Across Breed QTL Detection and Genomic Prediction in French and Danish Dairy Cattle Breeds

    DEFF Research Database (Denmark)

    van den Berg, Irene; Guldbrandtsen, Bernt; Hozé, C

    Our objective was to investigate the potential benefits of using sequence data to improve across breed genomic prediction, using data from five French and Danish dairy cattle breeds. First, QTL for protein yield were detected using high density genotypes. Part of the QTL detected within breed was...

  17. Conservation priorities for Ethiopian sheep breeds combining threat status, breed merits and contributions to genetic diversity

    NARCIS (Netherlands)

    Gizaw, S.; Komen, J.; Windig, J.J.; Hanotte, O.; Arendonk, van J.A.M.

    2008-01-01

    Prioritizing livestock breeds for conservation needs to incorporate both genetic and non-genetic aspects important for the survival of the breeds. Here, we apply a maximum-utility-strategy to prioritize 14 traditional Ethiopian sheep breeds based on their threat status, contributions to farmer livel

  18. Across Breed QTL Detection and Genomic Prediction in French and Danish Dairy Cattle Breeds

    DEFF Research Database (Denmark)

    van den Berg, Irene; Guldbrandtsen, Bernt; Hozé, C

    Our objective was to investigate the potential benefits of using sequence data to improve across breed genomic prediction, using data from five French and Danish dairy cattle breeds. First, QTL for protein yield were detected using high density genotypes. Part of the QTL detected within breed was...

  19. Artificiat insemination vercus natural breeding in a multi.breed beef ...

    African Journals Online (AJOL)

    calving-to-breeding period the following breeding season and a reduced ..... the first four weeks of the calving season, while only 49 9o of the calves born as a result ... breeding season rather than leaving the job to the bulls later in the season.

  20. Breeding programmes for smallholder sheep farming systems: II. Optimization of cooperative village breeding schemes

    NARCIS (Netherlands)

    Gizaw, S.; Arendonk, van J.A.M.; Valle-Zarate, A.; Haile, A.; Rischkowsky, B.; Dessie, T.; Mwai, A.O.

    2014-01-01

    A simulation study was conducted to optimize a cooperative village-based sheep breeding scheme for Menz sheep of Ethiopia. Genetic gains and profits were estimated under nine levels of farmers' participation and three scenarios of controlled breeding achieved in the breeding programme, as well as un

  1. The breeding of two polyploid rice lines with the characteristic of polyploid meiosis stability

    Institute of Scientific and Technical Information of China (English)

    2007-01-01

    Polyploidization is a basic feature of plant evolution. Nearly all of the main food, cotton and oil crops are polyploid. When ploidy levels increase, yields double; this phenomenon suggested a new strategy of rice breeding that utilizes wide crosses and polyploidization dual advantages to breed super rice. Because low seed set rates in polyploid rice usually makes it difficult to breed, the selection of Ph-liked gene lines was emphasized. After progenies of indica-japonica were identified and selected, two poly- ploid lines, PMeS-1 and PMeS-2 with Polyploid Meiosis Stability (PMeS) genes were bred. The proce- dure included seven steps: selecting parents, crossing or multiple crossing, back-crossing, doubling chromosomes, identifying the polyploid, and choosing plants with high seed set rates that can breed themselves into stable lines. The characteristics of PMeS were determined by observing meiotic be- haviors and by cross-identification of seed sets. PMeS-1 and PMeS-2, (japonica rice), have several characteristics different from other polyploid rice lines, including a higher rate of seed set (more than 65%, increasing to more than 70% in their F1 offspring); and stable meiotic behaviors (pairing with bi- valents and quarivalents nearly without over-quarivalent in prophase, nearly without lagging chromo- somes in metaphase and without micronuclei in anaphase and telophase). The latter was obviously different from control polyploid line Dure-4X, which displayed abnormal meiotic behaviors including a higher rate of multivalents, univalents and trivalents in prophase, lagging chromosomes in metaphase and micronuclei in anaphase and telophase. There were also three differences of the breeding method between PMeS lines and normal diploid lines: chromosomes doubling, polyploidism identifying and higher seed set testing. The selection of PMeS lines is the first step in polyploid rice breeding; their use will advance the progress of polyploid rice breeding, which will in

  2. The breeding of two polyploid rice lines with the characteristic of polyploid meiosis stability

    Institute of Scientific and Technical Information of China (English)

    CAI DeTian; HE YuChi; ZHANG DaoSheng; HE GuangCun; ZHU YingGuo; CHEN JianGuo; CHEN DongLing; DAI BingCheng; ZHANG Wei; SONG ZhaoJian; YANG ZhiFan; DU ChaoQun; TANG ZhiQiang

    2007-01-01

    Polyploidization is a basic feature of plant evolution. Nearly all of the main food, cotton and oil crops are polyploid. When ploidy levels increase, yields double; this phenomenon suggested a new strategy of rice breeding that utilizes wide crosses and polyploidization dual advantages to breed super rice.Because low seed set rates in polyploid rice usually makes it difficult to breed, the selection of Ph-liked gene lines was emphasized. After progenies of indica-japonica were identified and selected, two polyploid lines, PMeS-1 and PMeS-2 with Polyploid Meiosis Stability (PMeS) genes were bred. The procedure included seven steps: selecting parents, crossing or multiple crossing, back-crossing, doubling chromosomes, identifying the polyploid, and choosing plants with high seed set rates that can breed themselves into stable lines. The characteristics of PMeS were determined by observing meiotic behaviors and by cross-identification of seed sets. PMeS-1 and PMeS-2, (japonica rice), have several characteristics different from other polyploid rice lines, including a higher rate of seed set (more than 65%, increasing to more than 70% in their F1 offspring); and stable meiotic behaviors (pairing with bivalents and quarivalents nearly without over-quarivalent in prophase, nearly without lagging chromosomes in metaphase and without micronuclei in anaphase and telophase). The latter was obviously different from control polyploid line Dure-4X, which displayed abnormal meiotic behaviors including a higher rate of multivalents, univalents and trivalents in prophase, lagging chromosomes in metaphase and micronuclei in anaphase and telophase. There were also three differences of the breeding method between PMeS lines and normal diploid lines: chromosomes doubling, polyploidism identifying and higher seed set testing. The selection of PMeS lines is the first step in polyploid rice breeding; their use will advance the progress of polyploid rice breeding, which will in turn offer

  3. The past, present and future of breeding rust resistant wheat

    Directory of Open Access Journals (Sweden)

    Jeffrey G Ellis

    2014-11-01

    Full Text Available Two classes of genes are used for breeding rust resistant wheat. The first class, called R (for resistance genes, are pathogen race-specific in their action, effective at all plant growth stages and probably mostly encode immune receptors of the nucleotide binding leucine rich repeat (NB-LRR class. The second class called Adult Plant Resistance genes (APR because resistance is usually functional only in adult plants, and, in contrast to most R genes, the levels of resistance conferred by single APR genes are only partial and allow considerable disease development. Some but not all APR genes provide resistance to all isolates of a rust pathogen species and a subclass of these provides resistance to several fungal pathogen species. Initial indications are that APR genes encode a more heterogeneous range of proteins than R proteins. Two APR genes, Lr34 and Yr36, have been cloned from wheat and their products are an ABC transporter and a protein kinase, respectively. Lr34 and Sr2 have provided long lasting and widely used (durable partial resistance and are mainly used in conjunction with other R and APR genes to obtain adequate rust resistance. We caution that some APR genes indeed include race-specific, weak R genes which may be of the NB-LRR class. A research priority to better inform rust resistance breeding is to characterize further APR genes in wheat and to understand how they function and how they interact when multiple APR and R genes are stacked in a single genotype by conventional and GM breeding. An important message is do not be complacent about the general durability of all APR genes.

  4. Cattle breeding goals and production circumstances

    NARCIS (Netherlands)

    Groen, A.F.

    1989-01-01

    This thesis gives the results of a study on the relationship between cattle breeding goals and production circumstances. The relationship between breeding goals and production circumstances mostly arises from the influences of production circumstances on the economic values of genetic

  5. Breed predisposition to canine gastric carcinoma

    DEFF Research Database (Denmark)

    Seim-Wikse, Tonje; Jörundsson, Einar; Nødtvedt, Ane

    2013-01-01

    Previous research has indicated a breed predisposition to gastric carcinoma in dogs. However, results to date are inconsistent since several studies have failed to prove such a predisposition. Better knowledge of breeds at risk could facilitate early detection of gastric carcinoma in dogs. The ai...

  6. Breed predisposition to canine gastric carcinoma

    DEFF Research Database (Denmark)

    Seim-Wikse, Tonje; Jörundsson, Einar; Nødtvedt, Ane;

    2013-01-01

    Previous research has indicated a breed predisposition to gastric carcinoma in dogs. However, results to date are inconsistent since several studies have failed to prove such a predisposition. Better knowledge of breeds at risk could facilitate early detection of gastric carcinoma in dogs. The ai...

  7. Genetic diversity of 11 European pig breeds

    NARCIS (Netherlands)

    Lavall, G.; Iannuccelli, N.; Legault, C.; Milan, D.; Groenen, M.A.M.; Andersson, L.; Fredholm, M.; Geldermann, H.; Foulley, J.L.; Chevalet, C.; Ollivier, L.

    2000-01-01

    A set of eleven pig breeds originating from six European countries, and including a small sample of wild pigs, was chosen for this study of genetic diversity. Diversity was evaluated on the basis of 18 microsatellite markers typed over a total of 483 DNA samples collected. Average breed heterozygosi

  8. Cattle breeding goals and production circumstances.

    NARCIS (Netherlands)

    Groen, A.F.

    1989-01-01

    This thesis gives the results of a study on the relationship between cattle breeding goals and production circumstances. The relationship between breeding goals and production circumstances mostly arises from the influences of production circumstances on the economic values of geneticim

  9. Breeding for behavioural change in farm animals

    DEFF Research Database (Denmark)

    D'Eath, R.B.; Conington, J.; Lawrence, A.B.

    2010-01-01

    In farm animal breeding, behavioural traits are rarely included in selection programmes despite their potential to improve animal production and welfare. Breeding goals have been broadened beyond production traits in most farm animal species to include health and functional traits, and opportunit...

  10. Breeding for behavioural change in farm animails

    DEFF Research Database (Denmark)

    Sandøe, Peter; D'eath, RB; Lawrence, AB

    2009-01-01

    examples, such as breeding for good maternal behaviour, could enhance welfare, production and naturalness, although dilemmas emerge where improved welfare could result from breeding away from natural behaviour. Selection against certain behaviours may carry a risk of creating animals which are generally...

  11. Impact of selective breeding on European aquaculture

    NARCIS (Netherlands)

    Janssen, K.; Chavanne, H.; Berentsen, P.; Komen, H.

    2016-01-01

    Objectives of this study were to determine the combined market share of breeding companies in aquaculture production in Europe, to describe the main characteristics of breeding companies and their programs, and to provide per species estimates on cumulative genetic gain in growth performance. Sur

  12. Super Hybrid Rice Breeding in China: Achievements and Prospects

    Institute of Scientific and Technical Information of China (English)

    Shi-Hua Cheng; Li-Yong Cao; Jie-Yun Zhuang; Shen-Guang Chen; Xiao-Deng Zhan; Ye-Yang Fan; De-Feng Zhu; Shao-Kai Min

    2007-01-01

    Hybrid rice has contributed greatly to the self-sufficiency of food supply in China. To meet the future demand for rice production, a national program on super rice breeding was established in China in 1996. The corresponding targets, breeding strategies and most significant advances are reviewed in this paper. New plant type models have been modified to adjust to various rice growing regions. In recognition of the importance of applying parents with intermediate subspecies differentiation in increasing F1 yield, medium type parental lines were selected from populations derived from inter-subspecies crosses with the assistance of DMA markers for subspecies differentiation. Results also indicate that a substantial increase of biomass is the basis for further enhancement of the grain yield potential, and amelioration of leaf characteristics is helpful in increasing the photosynthetic rate. Thirty-four super hybrid rice varieties have been released commercially, growing in a total area of 13.5 million hm2 and producing 6.7 thousand million kg more rice in 1998-2005. Although remarkable progress has been made in super hybrid rice breeding in China, selections on the root system and integration of more biotechnological tools remain a great challenge.

  13. Quantitative disease resistance and quantitative resistance Loci in breeding.

    Science.gov (United States)

    St Clair, Dina A

    2010-01-01

    Quantitative disease resistance (QDR) has been observed within many crop plants but is not as well understood as qualitative (monogenic) disease resistance and has not been used as extensively in breeding. Mapping quantitative trait loci (QTLs) is a powerful tool for genetic dissection of QDR. DNA markers tightly linked to quantitative resistance loci (QRLs) controlling QDR can be used for marker-assisted selection (MAS) to incorporate these valuable traits. QDR confers a reduction, rather than lack, of disease and has diverse biological and molecular bases as revealed by cloning of QRLs and identification of the candidate gene(s) underlying QRLs. Increasing our biological knowledge of QDR and QRLs will enhance understanding of how QDR differs from qualitative resistance and provide the necessary information to better deploy these resources in breeding. Application of MAS for QRLs in breeding for QDR to diverse pathogens is illustrated by examples from wheat, barley, common bean, tomato, and pepper. Strategies for optimum deployment of QRLs require research to understand effects of QDR on pathogen populations over time.

  14. Breeding wheat for drought tolerance:Progress and technologies

    Institute of Scientific and Technical Information of China (English)

    Learnmore Mwadzingeni; Hussein Shimelis; Ernest Dube; Mark D Laing; Toi J Tsilo

    2016-01-01

    Recurrent drought associated with climate change is among the principal constraints to global productivity of wheat (Triticum aestivum (L.) andT. turgidum (L.)). Numerous efforts to mitigate drought through breeding resilient varieties are underway across the world. Progress is, however, hampered because drought tolerance is a complex trait that is controled by many genes and its ful expression is affected by the environment. Furthermore, wheat has a structuraly intricate and large genome. Consequently, breeding for drought tolerance requires the integration of various knowledge systems and methodologies from multiple disciplines in plant sciences. This review summarizes the progress made in dry land wheat improvement, advances in knowledge, complementary methodologies, and perspectives towards breeding for drought tolerance in the crop to create a coherent overview. Phenotypic, biochemical and genomics-assisted selection methodologies are discussed as leading research components used to exploit genetic variation. Advances in phenomic and genomic technologies are highlighted as options to circumvent existing bottlenecks in phenotypic and genomic selection, and gene transfer. The prospects of further integration of these technologies with other omics technologies are also provided.

  15. Breeding for behavioural change in farm animals

    DEFF Research Database (Denmark)

    D'Eath, R.B.; Conington, J.; Lawrence, A.B.

    2010-01-01

    In farm animal breeding, behavioural traits are rarely included in selection programmes despite their potential to improve animal production and welfare. Breeding goals have been broadened beyond production traits in most farm animal species to include health and functional traits...... in order to evaluate the large numbers of animals necessary for a breeding programme. For this reason, the development and validation of proxy measures of key behavioural traits is often required. Despite these difficulties, behavioural traits have been introduced by certain breeders. For example, ease...... of handling is now included in some beef cattle breeding programmes. While breeding for behaviour is potentially beneficial, ethical concerns have been raised. Since animals are adapted to the environment rather than the other way around, there may be a loss of 'naturalness' and/or animal integrity. Some...

  16. Selection criteria in organic cattle breeding

    Directory of Open Access Journals (Sweden)

    Savić Mila

    2014-01-01

    Full Text Available The central issue in process of organizing organic cattle breeding is the knowledge about specificities of this kind of production, good knowledge of breed characteristics (body composition, immune tolerance, expressed predisposition towards some diseases, production properties. Research centres, in collaboration with producers, have defined the essential features on which the selection programmes in organic cattle breeding are based on. Of the greatest importance for veterinary service is the fact that selection programmes in organic cattle breeding are in the first place based on giving priority to healthy animals, with strong immune system, good reproductive characteristics, which can be in production system for a long period. Additional important selective criteria is specific body resistance and adaptability of autochtonous breeds to environmental conditions. [Projekat Ministarstva nauke Republike Srbije, br. TP 31085

  17. Artemisia annua L.: Polyploidy and NIRS, two tools to improve breeding efficiency

    Directory of Open Access Journals (Sweden)

    Quennoz, Mélanie

    2016-07-01

    Full Text Available Breeding a new cultivar needs 5 to 15 years according to the species and the breeding objectives from bioprospection up to cultivar registration. This is a very long time for companies developing and trading plant based products. To react more quickly to the requirements of the stakeholders, methods to accelerate the breeding procedures have to be taken into account. Among different possibilities, polyploidy induction and rapid methods to measure target traits with near infrared spectroscopy (NIRS were tested on Artemisia annua L. Tetraploid progenies were compared to the cultivar Apollon. These tests showed no significant differences between the tetraploid plants and the cultivar Apollon for the artemisinin content, as well for the leaf and the artemisin yield. The determination of artemisinin in powder of Artemisia annua using a hand-held NIRS device showed accurate results in predicting artemininin contents. Root mean square error values of cross-validation and prediction of 0.1 % were calculated, in both cases.

  18. Advanced phenotyping offers opportunities for improved breeding of forage and turf species

    DEFF Research Database (Denmark)

    Walter, Achim; Studer, Bruno; Kölliker, Roland

    2012-01-01

    Background and Aims Advanced phenotyping, i.e. the application of automated, high-throughput methods to characterize plant architecture and performance, has the potential to accelerate breeding progress but is far from being routinely used in current breeding approaches. In forage and turf...... improvement programmes, in particular, where breeding populations and cultivars are characterized by high genetic diversity and substantial genotype × environment interactions, precise and efficient phenotyping is essential to meet future challenges imposed by climate change, growing demand and declining...... resources. Scope This review highlights recent achievements in the establishment of phenotyping tools and platforms. Some of these tools have originally been established in remote sensing, some in precision agriculture, while others are laboratory-based imaging procedures. They quantify plant colour...

  19. Genetic diversity in Tunisian horse breeds

    Directory of Open Access Journals (Sweden)

    B. Jemmali

    2017-06-01

    Full Text Available This study aimed at screening genetic diversity and differentiation in four horse breeds raised in Tunisia, the Barb, Arab-Barb, Arabian, and English Thoroughbred breeds. A total of 200 blood samples (50 for each breed were collected from the jugular veins of animals, and genomic DNA was extracted. The analysis of the genetic structure was carried out using a panel of 16 microsatellite loci. Results showed that all studied microsatellite markers were highly polymorphic in all breeds. Overall, a total of 147 alleles were detected using the 16 microsatellite loci. The average number of alleles per locus was 7.52 (0.49, 7.35 (0.54, 6.3 (0.44, and 6 (0.38 for the Arab-Barb, Barb, Arabian, and English Thoroughbred breeds, respectively. The observed heterozygosities ranged from 0.63 (0.03 in the English Thoroughbred to 0.72 in the Arab-Barb breeds, whereas the expected heterozygosities were between 0.68 (0.02 in the English Thoroughbred and 0.73 in the Barb breeds. All FST values calculated by pairwise breed combinations were significantly different from zero (p  <  0.05 and an important genetic differentiation among breeds was revealed. Genetic distances, the factorial correspondence, and principal coordinate analyses showed that the important amount of genetic variation was within population. These results may facilitate conservation programs for the studied breeds and enhance preserve their genetic diversity.

  20. Patterns of molecular genetic variation among cat breeds.

    Science.gov (United States)

    Menotti-Raymond, Marilyn; David, Victor A; Pflueger, Solveig M; Lindblad-Toh, Kerstin; Wade, Claire M; O'Brien, Stephen J; Johnson, Warren E

    2008-01-01

    Genetic variation in cat breeds was assessed utilizing a panel of short tandem repeat (STR) loci genotyped in 38 cat breeds and 284 single-nucleotide polymorphisms (SNPs) genotyped in 24 breeds. Population structure in cat breeds generally reflects their recent ancestry and absence of strong breed barriers between some breeds. There is a wide range in the robustness of population definition, from breeds demonstrating high definition to breeds with as little as a third of their genetic variation partitioning into a single population. Utilizing the STRUCTURE algorithm, there was no clear demarcation of the number of population subdivisions; 16 breeds could not be resolved into independent populations, the consequence of outcrossing in established breeds to recently developed breeds with common ancestry. These 16 breeds were divided into 6 populations. Ninety-six percent of cats in a sample set of 1040 were correctly assigned to their classified breed or breed group/population. Average breed STR heterozygosities ranged from moderate (0.53; Havana, Korat) to high (0.85; Norwegian Forest Cat, Manx). Most of the variation in cat breeds was observed within a breed population (83.7%), versus 16.3% of the variation observed between populations. The hierarchical relationships of cat breeds is poorly defined as demonstrated by phylogenetic trees generated from both STR and SNP data, though phylogeographic grouping of breeds derived completely or in part from Southeast Asian ancestors was apparent.

  1. CROSSING OF HOLSTEIN HORSE BREED WITH SOME OTHER BREEDS

    Directory of Open Access Journals (Sweden)

    Josip Ljubešić

    2000-06-01

    Full Text Available An experiment of crossing a heavier-weight semi-breed horse (Holstein with mares of Croatian Posavian type draft horse resulted in possibility of such further crossing. Attained product meets today’s market requirements: firstly as an export-meat category that meets Italian market requirements, since other markets are not well known, secondly, it can be used as a sport-tourist-recreation horse. It must be pointed out that all produced hybrids did not meet the needs of these two basic criteria. In spite of being potential slaughtery head with good utilization, each produced head can be, according to its exterial properties, used as a sporttourist animal that showed certain usable values and results proven by the experiment. The hybrids showed some hereditory draft horse properties shown on enclosed photos. In addition, exterier measures show that former knowledge on hybrids can respond the question of a horse raising on non-utilized pastures which they got used to very well. Thus these horses are able to be estimated by their body development just as our native draft Posavian type horse including possibility of using them as a sport-tourist-recreation horse.

  2. Livestock breeding for sustainability to mitigate global warming, with ...

    African Journals Online (AJOL)

    Livestock breeding for sustainability to mitigate global warming, with the emphasis ... is essential in implementing efficient breeding systems to cope with climate change. Sophisticated statistical models continue to support animal breeding and ...

  3. A new versatile database created for geneticists and breeders to link molecular and phenotypic data in perennial crops: the AppleBreed DataBase

    NARCIS (Netherlands)

    Antofie, A.; Lateur, M.; Oger, R.; Patocchi, A.; Durel, C.E.; Weg, van de W.E.

    2007-01-01

    Objective: AppleBreed DataBase (DB) aims to store genotypic and phenotypic data from multiple pedigree verified plant populations (crosses, breeding selections and commercial cultivars) so that they are easily accessible for geneticists and breeders. It will help in elucidating the genetics of econo

  4. A new versatile database created for geneticists and breeders to link molecular and phenotypic data in perennial crops: the AppleBreed DataBase

    NARCIS (Netherlands)

    Antofie, A.; Lateur, M.; Oger, R.; Patocchi, A.; Durel, C.E.; Weg, van de W.E.

    2007-01-01

    Objective: AppleBreed DataBase (DB) aims to store genotypic and phenotypic data from multiple pedigree verified plant populations (crosses, breeding selections and commercial cultivars) so that they are easily accessible for geneticists and breeders. It will help in elucidating the genetics of

  5. Breeding objectives for Targhee sheep.

    Science.gov (United States)

    Borg, R C; Notter, D R; Kuehn, L A; Kott, R W

    2007-11-01

    Breeding objectives were developed for Targhee sheep under rangeland production conditions. Traits considered were those for which EPD were available from the US National Sheep Improvement Program and included direct and maternal effects on 120-d weaning weight (WW and MM, respectively); yearling weight (YW); yearling fleece weight, fiber diameter, and staple length; and percent lamb crop (PLC), measured as the number of lambs born per 100 ewes lambing. A bioeconomic model was used to predict the effects of a change of 1 additive SD in EPD for each trait, holding all other traits constant at their mean, on animal performance, feed requirements, feed costs, and economic returns. Resulting economic weightings were then used to derive selection indexes. Indexes were derived separately for 3 prolificacy levels (1.41, 1.55, and 1.70 lambs/ewe lambing), 2 triplet survival levels (50 and 67%), 2 lamb pricing policies (with or without discounting of prices for heavy feeder lambs), and 3 forage cost scenarios (renting pasture, purchasing hay, or reducing flock size to accommodate increased nutrient requirements for production). Increasing PLC generally had the largest impact on profitability, although an increase in WW was equally important, with low feed costs and no discounting of prices for heavy feeder lambs. Increases in PLC were recommended at all 3 prolificacy levels, but with low triplet survival the value of increasing PLC eventually declined as the mean litter size increased to approximately 2.15 lambs/ewe lambing and above. Increasing YW (independent of WW) increased ewe maintenance costs and reduced profitability. Predicted changes in breeding values for WW and YW under index selection varied with lamb pricing policy and feed costs. With low feed costs or no discounts for heavy lambs, YW increased at a modest rate in association with increasing WW, but with high feed costs or discounting of heavy lambs, genetic trends in WW were reduced by approximately 50% to

  6. The influence of reactor core parameters on effective breeding coefficient Keff

    Institute of Scientific and Technical Information of China (English)

    Liu Li-Po; Liu Yi-Bao; Wang Juan; Yang Bo; Zhang Tao

    2008-01-01

    The values of effective breeding coefficient Keff in a reactor core of nuclear power plant are calculated for different values of parameters (core structure, fuel assembly component) by using the Monte Carlo method. The obtained values of Keff are compared and analysed, which can provide theoretical basis for reactor design.

  7. Applying SNP marker technology in the cacao breeding program at the Cocoa Research Institute of Ghana

    Science.gov (United States)

    In this investigation 45 parental cacao plants and five progeny derived from the parental stock studied were genotyped using six SNP markers to determine off-types or mislabeled clones and to authenticate crosses made in the Cocoa Research Institute of Ghana (CRIG) breeding program. Investigation wa...

  8. The development of FISH tools for genetic, phylogenetic and breeding studies in tomato (Solanum lycopersicum)

    NARCIS (Netherlands)

    Szinay, D.

    2010-01-01

    In this thesis various fluorescence in situ hybridization (FISH) technologies are described to support genome projects, plant breeding and phylogenetic analysis on tomato (Solanum lycopersicum, 2n=24). Its genome is 980 Mb and only 30 % are single copy sequences, which are mostly found in the euchro

  9. Initial experiences utilizing exotic landrace germplasm in an upland cotton breeding program

    Science.gov (United States)

    A critical objective of plant breeding programs is accessing new sources of genetic variation. In upland cotton, one of the relatively untapped sources of genetic variation is maintained in the USDA-ARS cotton germplasm collection and is the exotic landrace collection. Photoperiod sensitivity is a m...

  10. Breeding biology of the threadstalk milkvetch, Astragalus filipes (Fabaceae), with a review of the genus

    Science.gov (United States)

    Kristal M. Watrous; James H. Cane

    2011-01-01

    Astragalus L. (Fabaceae) is an enormous and diverse plant genus with a cosmopolitan distribution, but relatively few breeding biologies are known for its member species. Threadstalk (or basalt) milkvetch, Astragalus filipes Torrey ex. A. Gray, is common and widespread throughout the U.S. Intermountain West, including the Great Basin. It is being studied and ultimately...

  11. Not only emerging technologies are at risk: The case of mutation breeding

    DEFF Research Database (Denmark)

    Hagemann, Kit S.; Scholderer, Joachim

    2007-01-01

    plants. Unlike crop cultivars developed by newer techniques such as genetic engineering, mutation-bred cultivars are not subject to special types of horizontal regulation in any UN country. Based on representative survey data (N = 1000), public attitudes towards mutation breeding were compared...

  12. Vegetable breeding innovation in China and the Netherlands : a study at sectoral, company and project level

    NARCIS (Netherlands)

    Liu, Z.

    2013-01-01

    The seed business plays a crucial role at the basis of the food supply chain, and companies which are active in plant breeding and production and sales of seeds are embedded in a competitive environment. They continuously face challenges to develop higher yielding varieties with better or new

  13. The potential of breeding for enhanced inducibility in Pinus pinaster and Pinus radiata

    Science.gov (United States)

    Rafael Zas; Alejandro Solla; Xoaquin Moreira; Luis Sampedro

    2012-01-01

    Most resistance mechanisms against pests and pathogens in pine trees involve the production of chemical defenses. These defenses are not cost free and the production of secondary metabolisms is generally inversely related with other plant fitness correlates, such as growth. The existence of these negative genetic correlations imposes an important obstacle for breeding...

  14. Combining ability for seed yield traits of Chenopodium quinoa breeding lines

    NARCIS (Netherlands)

    Mastebroek, H.D.; Loo, van E.N.; Dolstra, O.

    2002-01-01

    For a better understanding of the inheritance of seed yield traits in Quinoa ( Chenopodium quinoa) Willd., a half-diallelic crossing experiment with six diverse but uniform breeding lines was conducted. True hybrid plants were detected by means of differences in panicle colour in 14 out of the 15 cr

  15. Tomato early blight (Alternaria solani): the pathogen, genetics and breeding for resistance

    NARCIS (Netherlands)

    Chaerani, R.; Voorrips, R.E.

    2006-01-01

    Alternaria solani causes diseases on foliage (early blight), basal stems of seedlings (collar rot), stems of adult plants (stem lesions), and fruits (fruit rot) of tomato. Early blight is the most destructive of these diseases and hence receives considerable attention in breeding. For over 60 years,

  16. The development of FISH tools for genetic, phylogenetic and breeding studies in tomato (Solanum lycopersicum)

    NARCIS (Netherlands)

    Szinay, D.

    2010-01-01

    In this thesis various fluorescence in situ hybridization (FISH) technologies are described to support genome projects, plant breeding and phylogenetic analysis on tomato (Solanum lycopersicum, 2n=24). Its genome is 980 Mb and only 30 % are single copy sequences, which are mostly found in the

  17. Behaviour of genetically modified amylose free potato clones as progenitors in a breeding program.

    NARCIS (Netherlands)

    Heeres, P.; Jacobsen, E.; Visser, R.G.F.

    1997-01-01

    Three amylose-free genetically modified potato clones were used both as male and female parents in a breeding program with non-GMO potato clones. Segregation data on the expression of the inserted antisense gene construct in tubers of progeny plants were in agreement with previous molecular analysis

  18. 草本能源植物培育及催化制备先进液体燃料%Advanced Liquid Fuel Production by Herbage Energy Plant Breeding and Catalytic Transformation

    Institute of Scientific and Technical Information of China (English)

    马隆龙; 刘琪英

    2016-01-01

    协同转化纤维素和半纤维素,实现了糖类衍生物到平台分子(糠醛,HMF和乙酰丙酸)的高效转化,揭示了上述转化过程的反应机理与产物控制机制;设计制备了新型双功能加氢催化剂,研究了水相平台分子HMF加氢氢解为含氧化合物2,5-二甲基呋喃的反应机理、选择性控制规律;制备了高效的氧化催化剂K-OMS-2,阐明了该催化剂上HMF到2,5-呋喃二甲醛的转化规律。发展了从酸水残渣中提取甜高粱木质素的方法,并对其结构进行了表征;在实验室合成了木质素二聚体模型;制备了高效负载型金属催化剂体系,研究了木质素低聚物解聚反应和酚类衍生物制备液体烷烃的反应机理;发展了含钒杂多酸在水/醇混合溶剂体系中催化氧化解聚木质素,获得了含有芳香醛类化合物,研究了Aldol缩合、频哪醇偶联和傅克反应的增碳反应机理,通过催化剂加氢脱氧,实现了由木质素制取C13-C17的液态烃类燃料。%With aiming to the three key scientific issues, this project conducted the production advanced liquid fuels from biomass, and the development is listed as follows: (1) So as to the first key scientific issue, this project conducted the investigation on the the component and construction, and the function and mechansim of the stress-inducible gene during biosynthesis of energy plant such as energy sorghum. The net mediation mechanism of secondary cell wall formation in energy sorghum by biosynthesis was elucidated. The measurement platform and evaluation system for the genetic diversity of plasm germ was established. (2) For the second key scientific issue, this project clarified the decompolymerization mechanism and product controlling pathway of biomass macro-molecules in hydrothermal condition. The structure properties of acid/alkali treated lignin were explained and the dynamical model of the alkali dissolved lignin was built. For

  19. Propriedades do pólen e do estigma de Ocimum basilicum L. (cultivar Maria Bonita para aumentar a eficiência de cruzamentos em programas de melhoramento Ocimum basilicum L. (cultivar Maria Bonita pollen and stigma properties to improve the efficiency of crossings in plant breeding programs

    Directory of Open Access Journals (Sweden)

    A.C Brito

    2010-06-01

    Full Text Available Ocimum basilicum, cv. Maria Bonita (Lamiaceae, conhecido como manjericão, é espécie que apresenta propriedades aromáticas, condimentares e medicinais, por ser rico emóleos essenciais. É muito usado nas indústrias farmacêuticas e de alimentos em geral. O objetivo deste trabalho foi estudar as propriedades do pólen e estigma do manjericão (cultivar Maria Bonita identificando procedimentos simples que possam contribuir para programas de melhoramento. Para análise da disponibilidade, viabilidade do pólen e receptividade de estigma, botões florais foram coletados de hora em hora ao longo do dia, e lâminas eram montadas e coradas, para observação em microscópio óptico. Foi verificado que o manjericão apresenta antese diurna, assincrônica e com a maioria das flores se abrindo entre 10:00 e 11:00 horas. Quanto ao estudo do pólen foi verificado que a viabilidade manteve-se elevada ao longo do dia e a conservação por até 90 dias demonstrou bons níveis de viabilidade. O estigma apresentou receptividade desde a pré-antese até a pós-antese. Estas informações são relevantes para os melhoristas que desejam fazer seleção de genótipos ou hibridações em programas de melhoramento, contribuindo para aumentar o potencial da espécie que já se destaca como produtora de óleos essenciais.Known as basil, Ocimum basilicum cv. Maria Bonita (Lamiaceae is a species that presents aromatic, condimental and medicinal properties, since it is rich in essential oils. This species is largely used in pharmaceutical and food industries. The aim of this work was to study basil (cultivar Maria Bonita pollen and stigma properties, identifying simple procedures that can contribute to plant breeding programs. To analyze pollen availability and viability, besides stigma receptivity, flower buds were collected at every hour throughout the day, and slides were mounted, stained and observed under an optical microscope. Basil presented diurnal

  20. A preliminary Study of the Environmental Effect of Transgenic Cotton to the Rhizosphere Microorganisms and Cotton Field Pests in the Plant Breeding Base of Hainan%南繁条件下转基因棉花对根际土壤微生物及棉田虫害影响的初步研究

    Institute of Scientific and Technical Information of China (English)

    王昊; 黄启星; 孔祥义; 袁经天; 郭安平

    2011-01-01

    转基因作物安全评价是当前生物安全研究的重要内容.本实验以海南三亚南繁基地为实验平台,通过比较转BT/CPTI双价基因抗虫棉花SGK321和非转基因棉花石远321根际土壤微生物动态变化,初步研究了转基因棉花SGK321对农田生态环境的影响.通过常规培养计数、分子鉴定等手段监测土壤微生物多样性变化,经过近两年的跟踪研究,发现两次生长周期内,转基因棉花SGK321和非转基因棉花石远321根际土壤微生物(包括细菌、真菌、放线菌)的动态变化趋势大致相同,群落数量和种属组成都没有明显差异.此外,南繁大田种植环境条件下,除棉铃虫数量差异明显外,其余各种棉田虫害数量差异不明显.据此,我们初步推断南繁条件下转基因棉花SGK321的种植对土壤微生物及棉田虫害影响不显著.本研究可为在我国南繁基地开展转基因作物安全评价提供参考.%The safety assessment of transgenic crops is an important issue for public concern. This study was taken at the Plant Breeding Base of Hainan. The influence of transgenic pest- resistant cotton SGK321 (BT/ CPTI) on the rhizosphere microorganisms and the field environmental safety were studied. By petri dish cultivation, counting and molecular identification, in nearly two-year's practice and experiment, primary results were obtained. No significant difference in the community diversity of the rhizosphere microorganisms (bacteria, fungi, actinomyces) between SGK321 and Shiyuan321 were observed. The dynamics of the rhizosphere microbial community diversity were approximately the same. Moreover, except for the apparent difference in the abundance of Heliothis armigera, no distinct differences were observed in the other studied field pests. This study could provide a primary study sample for GM biosafety research in the Plant Breeding Base of Hainan.

  1. Native Pig and Chicken Breed Database: NPCDB

    Directory of Open Access Journals (Sweden)

    Hyeon-Soo Jeong

    2014-10-01

    Full Text Available Indigenous (native breeds of livestock have higher disease resistance and adaptation to the environment due to high genetic diversity. Even though their extinction rate is accelerated due to the increase of commercial breeds, natural disaster, and civil war, there is a lack of well-established databases for the native breeds. Thus, we constructed the native pig and chicken breed database (NPCDB which integrates available information on the breeds from around the world. It is a nonprofit public database aimed to provide information on the genetic resources of indigenous pig and chicken breeds for their conservation. The NPCDB (http://npcdb.snu.ac.kr/ provides the phenotypic information and population size of each breed as well as its specific habitat. In addition, it provides information on the distribution of genetic resources across the country. The database will contribute to understanding of the breed’s characteristics such as disease resistance and adaptation to environmental changes as well as the conservation of indigenous genetic resources.

  2. LINE CONSTRUCTION OF NONIUS BREED IN SLOVAKIA

    Directory of Open Access Journals (Sweden)

    Eva Mlyneková

    2013-12-01

    Full Text Available Nowadays breeding has become the problem often solved in European states and it has been paid much attention by breeding organizations. In terms of hippology as well as some urgent requirements from the side of nonius breeders we have focussed on this particular breed especially from the reason of its further survival and development in Slovakia. The aim of this paper was to evaluate the growth indicators as well as the achievement level of the stallions since 1927 to the present. Based on our research of the nonius body lines we can state that at present there are 3 stallions that are followers of the N VIII horse line founder. In general, there are 12 stallions that are active within this breed in Slovakia. It was statistically confirmed that this particular breed grew much stronger through the goal-directed breeding work, improved nutrition as well as the immediate breeding site. It was quite complicated to evaluate the performance tests because the individual indicators were significantly influenced by the subjective views of the commitee members performing the evaluation. The next factor which prevents the objective evaluation is the fact that in the period up to 1979, the performance tests were valued by the 100 point system and from the year 1980 by the 10 point system. That is why we take the performance test results into account only as supplemental ones, which can provide a kind of amendment to the observed biological parameters.

  3. Advances in Japanese pear breeding in Japan.

    Science.gov (United States)

    Saito, Toshihiro

    2016-01-01

    The Japanese pear (Pyrus pyrifolia Nakai) is one of the most widely grown fruit trees in Japan, and it has been used throughout Japan's history. The commercial production of pears increased rapidly with the successive discoveries of the chance seedling cultivars 'Chojuro' and 'Nijisseiki' around 1890, and the development of new cultivars has continued since 1915. The late-maturing, leading cultivars 'Niitaka' and 'Shinko' were released during the initial breeding stage. Furthermore, systematic breeding by the Horticultural Research Station (currently, NARO Institute of Fruit Tree Science, National Agriculture and Food Research Organization (NIFTS)) began in 1935, which mainly aimed to improve fruit quality by focusing on flesh texture and black spot disease resistance. To date, 22 cultivars have been released, including 'Kosui', 'Hosui', and 'Akizuki', which are current leading cultivars from the breeding program. Four induced mutant cultivars induced by gamma irradiation, which exhibit some resistance to black spot disease, were released from the Institute of Radiation Breeding. Among these cultivars, 'Gold Nijisseiki' has become a leading cultivar. Moreover, 'Nansui' from the Nagano prefectural institute breeding program was released, and it has also become a leading cultivar. Current breeding objectives at NIFTS mainly combine superior fruit quality with traits related to labor and cost reduction, multiple disease resistance, or self-compatibility. Regarding future breeding, marker-assisted selection for each trait, QTL analyses, genome-wide association studies, and genomic selection analyses are currently in progress.

  4. The Impact of Broccoli II & Tomato II on European patents in conventional breeding, GMO’s and Synthetic Biology:

    DEFF Research Database (Denmark)

    Minssen, Timo; Nordberg, Ana

    2015-01-01

    biological processes are – at least in principle- patentable under the European Patent Convention (EPC). This decision leaves considerable leeway for patenting novel and inventive plants and products thereof, which have been produced by methods including breeding steps, as opposed to plant varieties...

  5. Genetic evaluation of the breeding population of a valuable reforestation conifer Platycladus orientalis (Cupressaceae)

    Science.gov (United States)

    Jin, Yuqing; Ma, Yongpeng; Wang, Shun; Hu, Xian-Ge; Huang, Li-Sha; Li, Yue; Wang, Xiao-Ru; Mao, Jian-Feng

    2016-10-01

    Platycladus orientalis, a widespread conifer with long lifespan and significant adaptability. It is much used in reforestation in north China and commonly planted in central Asia. With the increasing demand for plantation forest in central to north China, breeding programs are progressively established for this species. Efficient use of breeding resources requires good understanding of the genetic value of the founder breeding materials. This study investigated the distribution of genetic variation in 192 elite trees collected for the breeding program for the central range of the species. We developed first set of 27 polymorphic EST-derived SSR loci for the species from transcriptome/genome data. After examination of amplification quality, 10 loci were used to evaluate the genetic variation in the breeding population. We found moderate genetic diversity (average He = 0.348) and low population differentiation (Fst = 0.011). Extensive admixture and no significant geographic population structure characterized this set of collections. Our analyses of the diversity and population structure are important steps toward a long-term sustainable deployment of the species and provide valuable genetic information for conservation and breeding applications.

  6. 植物天然免疫性研究进展及其对作物抗病育种的可能影响%Recent Findings in Plant Innate Immunity and Possible Impacts on Crop Disease-resistance Breeding

    Institute of Scientific and Technical Information of China (English)

    赵开军; 李岩强; 王春连; 高英

    2011-01-01

    , natural selection has been driving pathogens to avoid ETI either by diversifying the recognized effectors or by acquiring additional effectors that suppress ETI.On the other hand, natural selection favors plant new R-genes that can recognize the newly acquired effectors in pathogen, resulting in new ETI to be triggered again.The latest studies have revealed the simple cipher that governs DNA recognition by TAL (transcription activator-like) effectors from plant pathogenic Xanthomonas.TAL effectors can specifically bind the target DNA of host plant with a novel protein-DNA binding pattern in which two amino acids recognize one nucleotide.Using this recognition code, TAL effectors can bind the promoter of target genes and induce the host diseases or resistance responses.Recent findings about plant innate immunity are reviewed in this paper and their possible applications in plant breeding for disease resistance are discussed.

  7. Breeding Practices in Sheep Farming

    Directory of Open Access Journals (Sweden)

    M.A. Shejal

    2009-02-01

    Full Text Available The sheep is an important economic livestock species, contributing greatly to the Indian economy, especially in arid, semi arid and mountain areas. The current population in world is 1110.78 millions, around 44.85 millions (1987 sheeps in India (ICAR., 2002. Sheeps are mostly reared for meat and wool. The average annual wool production per sheep is between 3.5 to 5.5 kg of fine quality wool in Australia, New Zealand and U.S.S.R., where as in India except Magra sheep which annually yield more than 2 kg wool having staple length 5.8 cm, the average of rest of the wool produced is less than 1.0 kg per sheep of inferior quality (Banerjee G.C., 1998. Therefore many farmers in southern India adapted sheep rearing for meat production than for wool production. For yielding more production from sheep farming one should have sound knowledge of general information related to the reproduction and different breeding practices. [Vet. World 2009; 2(1.000: 43-44

  8. Management and Breeding Soundness of Mature Bulls.

    Science.gov (United States)

    Palmer, Colin W

    2016-07-01

    Mature bulls must be fed a balanced ration, vaccinated appropriately, and undergo a breeding soundness evaluation to ensure they meet what is required of a short, but intense breeding season. To be classified as a satisfactory potential breeder, minimum standards for physical soundness, scrotal circumference, sperm motility, and sperm morphology must be achieved using an accepted bull-breeding soundness evaluation format. Sperm production requires approximately 70 days. Heat and stress are the most common insults to spermatogenesis, causing an increase in morphologic abnormalities with obesity-associated scrotal fat accumulation being the most frequent cause of elevated testicular temperature in mature bulls.

  9. High-Throughput Genomics Enhances Tomato Breeding Efficiency

    Science.gov (United States)

    Barone, A; Di Matteo, A; Carputo, D; Frusciante, L

    2009-01-01

    Tomato (Solanum lycopersicum) is considered a model plant species for a group of economically important crops, such as potato, pepper, eggplant, since it exhibits a reduced genomic size (950 Mb), a short generation time, and routine transformation technologies. Moreover, it shares with the other Solanaceous plants the same haploid chromosome number and a high level of conserved genomic organization. Finally, many genomic and genetic resources are actually available for tomato, and the sequencing of its genome is in progress. These features make tomato an ideal species for theoretical studies and practical applications in the genomics field. The present review describes how structural genomics assist the selection of new varieties resistant to pathogens that cause damage to this crop. Many molecular markers highly linked to resistance genes and cloned resistance genes are available and could be used for a high-throughput screening of multiresistant varieties. Moreover, a new genomics-assisted breeding approach for improving fruit quality is presented and discussed. It relies on the identification of genetic mechanisms controlling the trait of interest through functional genomics tools. Following this approach, polymorphisms in major gene sequences responsible for variability in the expression of the trait under study are then exploited for tracking simultaneously favourable allele combinations in breeding programs using high-throughput genomic technologies. This aims at pyramiding in the genetic background of commercial cultivars alleles that increase their performances. In conclusion, tomato breeding strategies supported by advanced technologies are expected to target increased productivity and lower costs of improved genotypes even for complex traits. PMID:19721805

  10. Rootstock breeding in Prunus species: Ongoing efforts and new challenges

    Directory of Open Access Journals (Sweden)

    Felipe Gainza

    2015-08-01

    Full Text Available The current global agricultural challenges imply the need to generate new technologies and farming systems. In this context, rootstocks are an essential component in modern agriculture. Most currently used are those clonally propagated and there are several ongoing efforts to develop this type of plant material. Despite this tendency, lesser number of rootstock breeding programs exists in comparison to the large number of breeding programs for scion cultivars. In the case of rootstocks, traits evaluated in new selection lines are quite different: From the agronomic standpoint vigor is a key issue in order to establish high-density orchards. Other important agronomic traits include compatibility with a wide spectrum of cultivars from different species, good tolerance to root hypoxia, water use efficiency, aptitude to extract or exclude certain soil nutrients, and tolerance to soil or water salinity. Biotic stresses are also important: Resistance/tolerance to pests and diseases, such as nematodes, soil-borne fungi, crown gall, bacterial canker, and several virus, viroids, and phytoplasms. In this sense, the creation of new rootstocks at Centro de Estudios Avanzados en Fruticultura (CEAF offers an alternative to stone fruit crop, particularly in Chile, where just a few alternatives are commercially available, and there are site-specific problems. The implementation of molecular markers in order to give support to the phenotypic evaluation of plant breeding has great potential assisting the selection of new genotypes of rootstocks. Marker-Assisted Selection (MAS can shorten the time required to obtain new cultivars and can make the process more cost-effective than selection based exclusively on phenotype, but more basic research is needed to well understood the molecular and physiological mechanisms behind the studied trait.

  11. Next generation sequencing and omics in cucumber (Cucumis sativus L.) breeding directed research.

    Science.gov (United States)

    Pawełkowicz, Magdalena; Zieliński, Konrad; Zielińska, Dorota; Pląder, Wojciech; Yagi, Kouhei; Wojcieszek, Michał; Siedlecka, Ewa; Bartoszewski, Grzegorz; Skarzyńska, Agnieszka; Przybecki, Zbigniew

    2016-01-01

    In the post-genomic era the availability of genomic tools and resources is leading us to novel generation methods in plant breeding, as they facilitate the study of the genotype and its relationship with the phenotype, in particular for complex traits. In this study we have mainly concentrated on the Cucumis sativus and (but much less) Cucurbitaceae family several important vegetable crops. There are many reports on research conducted in Cucurbitaceae plant breeding programs on the ripening process, phloem transport, disease resistance, cold tolerance and fruit quality traits. This paper presents the role played by new omic technologies in the creation of knowledge on the mechanisms of the formation of the breeding features. The analysis of NGS (NGS-next generation sequencing) data allows the discovery of new genes and regulatory sequences, their positions, and makes available large collections of molecular markers. Genome-wide expression studies provide breeders with an understanding of the molecular basis of complex traits. Firstly a high density map should be created for the reference genome, then each re-sequencing data could be mapped and new markers brought out into breeding populations. The paper also presents methods that could be used in the future for the creation of variability and genomic modification of the species in question. It has been shown also the state and usefulness in breeding the chloroplastomic and mitochondriomic study.

  12. Reproductive characteristics and breeding improvement potential of switchgrass

    Energy Technology Data Exchange (ETDEWEB)

    Taliaferro, C.M. [Oklahoma State University, Stillwater (United States); Vogel, K.P. [USDA-ARS, Lincoln, Nebraska (United States); Bouton, J.H. [University of Georgia, Athens, GA (United States); McLaughlin, S.B.; Tuskan, G.A. [Oak Ridge National Laboratory, Oak Ridge, TN (United States)

    1999-07-01

    The genetic improvement of switchgrass, Panicum virgatum L., is an important component of the Department of Energy's (DOE) Biofuels Feedstock Development Program (BFDP) effort to develop the species as a biofuels crop. This paper reports research in elucidating reproductive characteristics and improvement potential of the species. Recent research confirms switchgrass to be highly outcrossed, highly self-incompatible, and comprised mainly of tetraploid (2n=4x=36) and octaploid (2n=8x=72) cytotypes. Hybridization potential is very low between plants of different ploidy and relatively high between plants of the same ploidy, regardless of ecotype. Breeding results based on phenotypic vs. genotypic recurrent selection procedures are discussed. (author)

  13. DNA-informed breeding of rosaceous crops: promises, progress and prospects

    Science.gov (United States)

    Peace, Cameron P

    2017-01-01

    Crops of the Rosaceae family provide valuable contributions to rural economies and human health and enjoyment. Sustained solutions to production challenges and market demands can be met with genetically improved new cultivars. Traditional rosaceous crop breeding is expensive and time-consuming and would benefit from improvements in efficiency and accuracy. Use of DNA information is becoming conventional in rosaceous crop breeding, contributing to many decisions and operations, but only after past decades of solved challenges and generation of sufficient resources. Successes in deployment of DNA-based knowledge and tools have arisen when the ‘chasm’ between genomics discoveries and practical application is bridged systematically. Key steps are establishing breeder desire for use of DNA information, adapting tools to local breeding utility, identifying efficient application schemes, accessing effective services in DNA-based diagnostics and gaining experience in integrating DNA information into breeding operations and decisions. DNA-informed germplasm characterization for revealing identity and relatedness has benefitted many programs and provides a compelling entry point to reaping benefits of genomics research. DNA-informed germplasm evaluation for predicting trait performance has enabled effective reallocation of breeding resources when applied in pioneering programs. DNA-based diagnostics is now expanding from specific loci to genome-wide considerations. Realizing the full potential of this expansion will require improved accuracy of predictions, multi-trait DNA profiling capabilities, streamlined breeding information management systems, strategies that overcome plant-based features that limit breeding progress and widespread training of current and future breeding personnel and allied scientists. PMID:28326185

  14. Present and perspectives in Romanian triticale breeding program.

    Science.gov (United States)

    Ittu, Gheorghe; Saulescu, Nicolae; Ittu, Mariana; Mustatea, Pompiliu

    2014-01-01

    Triticale is grown in Romania, mainly, in the hilly regions on the acid poor fertile soils and covers, yearly, around 100-130 thousands ha or 1.5% from the arable land. Since 1971, when the breeding program has been started, up to present, it has been developed an adapted triticale germplasm for the Romanian environmental conditions and 12 new varieties have been registered. Genetic progress for yield, estimated over a 27 years, is by 46 kg ha(1) year(1) or 0.80% year(1), similarly with those realized in the most dynamic triticale breeding programs of the world. The improving of yields has been achieved by an increased number of kernels per spikes, plumpness of kernels, test weight and reduction of the plant height by introduction in the Romanian triticale germplasm of RhtB1b (Rht1) and Ddw1 (Hl) genes. The genetic gain for reduction of plant height, in this period, was estimated at 1.16 cm yr(1). Further progress regarding yield stability under conditions of global climatic changes, a broader genetic diversity for preharvest sprouting (PHS), drought tolerance, earliness, high canopy albedo, diseases resistance, especially for fusarium head blight (low DON content in kernels), leaf rust and BYDV, is required.

  15. Genomics, Physiology, and Molecular Breeding Approaches for Improving Salt Tolerance.

    Science.gov (United States)

    Ismail, Abdelbagi M; Horie, Tomoaki

    2017-02-22

    Salt stress reduces land and water productivity and contributes to poverty and food insecurity. Increased salinization caused by human practices and climate change is progressively reducing agriculture productivity despite escalating calls for more food. Plant responses to salt stress are fairly well understood, involving numerous critical processes that are each controlled by multiple genes. Knowledge of the critical mechanisms controlling salt uptake and exclusion from functioning tissues, signaling of salt stress, and the arsenal of protective metabolites is advancing. However, little progress has been made in developing salt-tolerant varieties of crop species using standard (but slow) breeding approaches. The genetic diversity available within cultivated crops and their wild relatives provides rich sources for trait and gene discovery that has yet to be sufficiently utilized. Transforming this knowledge into modern approaches using genomics and molecular tools for precision breeding will accelerate the development of tolerant cultivars and help sustain food production. Expected final online publication date for the Annual Review of Plant Biology Volume 68 is April 29, 2017. Please see http://www.annualreviews.org/page/journal/pubdates for revised estimates.

  16. Genomics and the Instrinsic Value of Plants

    NARCIS (Netherlands)

    Gremmen, H.G.J.

    2005-01-01

    In discussions on genetic engineering and plant breeding, the intrinsic value of plants and crops is used as an argument against this technology. This paper focuses on the new field of plant genomics, which, according to some, is almost the same as genetic engineering. This raises the question wheth

  17. Genomics and the Instrinsic Value of Plants

    NARCIS (Netherlands)

    Gremmen, H.G.J.

    2005-01-01

    In discussions on genetic engineering and plant breeding, the intrinsic value of plants and crops is used as an argument against this technology. This paper focuses on the new field of plant genomics, which, according to some, is almost the same as genetic engineering. This raises the question wheth

  18. Genomics and the Instrinsic Value of Plants

    NARCIS (Netherlands)

    Gremmen, H.G.J.

    2005-01-01

    In discussions on genetic engineering and plant breeding, the intrinsic value of plants and crops is used as an argument against this technology. This paper focuses on the new field of plant genomics, which, according to some, is almost the same as genetic engineering. This raises the question

  19. Plant databases and data analysis tools

    Science.gov (United States)

    It is anticipated that the coming years will see the generation of large datasets including diagnostic markers in several plant species with emphasis on crop plants. To use these datasets effectively in any plant breeding program, it is essential to have the information available via public database...

  20. The ascent of cat breeds: genetic evaluations of breeds and worldwide random-bred populations.

    Science.gov (United States)

    Lipinski, Monika J; Froenicke, Lutz; Baysac, Kathleen C; Billings, Nicholas C; Leutenegger, Christian M; Levy, Alon M; Longeri, Maria; Niini, Tirri; Ozpinar, Haydar; Slater, Margaret R; Pedersen, Niels C; Lyons, Leslie A

    2008-01-01

    The diaspora of the modern cat was traced with microsatellite markers from the presumed site of domestication to distant regions of the world. Genetic data were derived from over 1100 individuals, representing 17 random-bred populations from five continents and 22 breeds. The Mediterranean was reconfirmed to be the probable site of domestication. Genetic diversity has remained broad throughout the world, with distinct genetic clustering in the Mediterranean basin, Europe/America, Asia and Africa. However, Asian cats appeared to have separated early and expanded in relative isolation. Most breeds were derived from indigenous cats of their purported regions of origin. However, the Persian and Japanese bobtail were more aligned with European/American than with Mediterranean basin or Asian clusters. Three recently derived breeds were not distinct from their parental breeds of origin. Pure breeding was associated with a loss of genetic diversity; however, this loss did not correlate with breed popularity or age.

  1. Waterfowl Breeding Population and Habitat Survey

    Data.gov (United States)

    US Fish and Wildlife Service, Department of the Interior — The Waterfowl Breeding Population and Habitat Survey was initiated experimentally in 1947 and became operational in 1955. It is conducted cooperatively by the U.S....

  2. Western Ontario: Waterfowl breeding population survey: 1986

    Data.gov (United States)

    US Fish and Wildlife Service, Department of the Interior — This report summarizes the Waterfowl Breeding Population and Habitat Survey for western Ontario during 1986. The primary purpose of the survey is to provide...

  3. California Least Tern Breeding Survey 1995 Season

    Data.gov (United States)

    US Fish and Wildlife Service, Department of the Interior — Sterna antillarum browni) nested at 37 sites along the coast of California. This 7% decrease in breeding population size from 1994 brings to an end the trend since...

  4. Final Performance Report : Snowy Plover Breeding Distribution

    Data.gov (United States)

    US Fish and Wildlife Service, Department of the Interior — Surveys of breeding populations and nesting habitat of the snowy plover were conducted from January to August, 1989 along the Gulf Coast of Florida and Alabama....

  5. Waterfowl breeding population survey: Southern Saskatchewan: 2000

    Data.gov (United States)

    US Fish and Wildlife Service, Department of the Interior — This report summarizes the Waterfowl Breeding Population and Habitat Survey for southern Saskatchewan during 2000. The primary purpose of the survey is to provide...

  6. Waterfowl breeding pair survey: Southern Alberta: 1981

    Data.gov (United States)

    US Fish and Wildlife Service, Department of the Interior — This report summarizes the Waterfowl Breeding Population and Habitat Survey for southern Alberta during 1981. The primary purpose of the survey is to provide...

  7. Waterfowl breeding population survey: Southern Manitoba: 1983

    Data.gov (United States)

    US Fish and Wildlife Service, Department of the Interior — This report summarizes the Waterfowl Breeding Population and Habitat Survey for southern Manitoba during 1983. The primary purpose of the survey is to provide...

  8. Waterfowl breeding population survey for Montana: 1993

    Data.gov (United States)

    US Fish and Wildlife Service, Department of the Interior — This report summarizes the Waterfowl Breeding Population and Habitat Survey for Montana during 1993. The primary purpose of the survey is to provide information on...

  9. Waterfowl breeding population survey for Montana: 1998

    Data.gov (United States)

    US Fish and Wildlife Service, Department of the Interior — This report summarizes the Waterfowl Breeding Population and Habitat Survey for Montana during 1998. The primary purpose of the survey is to provide information on...

  10. Waterfowl breeding population survey: Southern Saskatchewan: 1983

    Data.gov (United States)

    US Fish and Wildlife Service, Department of the Interior — This report summarizes the Waterfowl Breeding Population and Habitat Survey for southern Saskatchewan during 1983. The primary purpose of the survey is to provide...

  11. Central Quebec: Waterfowl breeding population survey: 2000

    Data.gov (United States)

    US Fish and Wildlife Service, Department of the Interior — This report summarizes the Waterfowl Breeding Population and Habitat Survey for Central Quebec during 2000. The primary purpose of the survey is to provide...

  12. Western Ontario: Waterfowl breeding population survey: 1989

    Data.gov (United States)

    US Fish and Wildlife Service, Department of the Interior — This report summarizes the Waterfowl Breeding Population and Habitat Survey for western Ontario during 1989. The primary purpose of the survey is to provide...

  13. Western Ontario: Waterfowl breeding population survey: 1995

    Data.gov (United States)

    US Fish and Wildlife Service, Department of the Interior — This report summarizes the Waterfowl Breeding Population and Habitat Survey for western Ontario during 1995. The primary purpose of the survey is to provide...

  14. Western Ontario: Waterfowl breeding population survey: 1993

    Data.gov (United States)

    US Fish and Wildlife Service, Department of the Interior — This report summarizes the Waterfowl Breeding Population and Habitat Survey for western Ontario during 1993. The primary purpose of the survey is to provide...

  15. Western Ontario: Waterfowl breeding population survey: 1994

    Data.gov (United States)

    US Fish and Wildlife Service, Department of the Interior — This report summarizes the Waterfowl Breeding Population and Habitat Survey for western Ontario during 1994. The primary purpose of the survey is to provide...

  16. Western Ontario: Waterfowl breeding population survey: 1996

    Data.gov (United States)

    US Fish and Wildlife Service, Department of the Interior — This report summarizes the Waterfowl Breeding Population and Habitat Survey for western Ontario during 1996. The primary purpose of the survey is to provide...

  17. Western Ontario: Waterfowl breeding population survey: 1987

    Data.gov (United States)

    US Fish and Wildlife Service, Department of the Interior — This report summarizes the Waterfowl Breeding Population and Habitat Survey for western Ontario during 1987. The primary purpose of the survey is to provide...

  18. Western Ontario: Waterfowl breeding population survey: 1992

    Data.gov (United States)

    US Fish and Wildlife Service, Department of the Interior — This report summarizes the Waterfowl Breeding Population and Habitat Survey for western Ontario during 1992. The primary purpose of the survey is to provide...

  19. Western Ontario: Waterfowl breeding population survey: 1990

    Data.gov (United States)

    US Fish and Wildlife Service, Department of the Interior — This report summarizes the Waterfowl Breeding Population and Habitat Survey for western Ontario during 1990. The primary purpose of the survey is to provide...

  20. Western Ontario: Waterfowl breeding population survey: 1997

    Data.gov (United States)

    US Fish and Wildlife Service, Department of the Interior — This report summarizes the Waterfowl Breeding Population and Habitat Survey for western Ontario during 1997. The primary purpose of the survey is to provide...

  1. Western Ontario: Waterfowl breeding population survey: 1988

    Data.gov (United States)

    US Fish and Wildlife Service, Department of the Interior — This report summarizes the Waterfowl Breeding Population and Habitat Survey for western Ontario during 1988. The primary purpose of the survey is to provide...

  2. Prospects for Hybrid Breeding in Bioenergy Grasses

    DEFF Research Database (Denmark)

    Aguirre, Andrea Arias; Studer, Bruno; Frei, Ursula

    2012-01-01

    of different hybrid breeding schemes to optimally exploit heterosis for biomass yield in perennial ryegrass (Lolium perenne L.) and switchgrass (Panicum virgatum), two perennial model grass species for bioenergy production. Starting with a careful evaluation of current population and synthetic breeding methods......, we address crucial topics to implement hybrid breeding, such as the availability and development of heterotic groups, as well as biological mechanisms for hybridization control such as self-incompatibility (SI) and male sterility (MS). Finally, we present potential hybrid breeding schemes based on SI...... and MS for the two bioenergy grass species, and discuss how molecular tools and synteny can be used to transfer relevant information for genes controlling these biological mechanisms across grass species...

  3. Advances in metabolomic applications in plant genetics and breeding

    Science.gov (United States)

    Metabolomics is a systems biology discipline wherein abundances of endogenous metabolites from biological samples are identified and quantitatively measured across a large range of metabolites and/or a large number of samples. Since all developmental, physiological and response to the environment ph...

  4. 78 FR 45494 - Plant Breeding Listening Session meeting

    Science.gov (United States)

    2013-07-29

    ... portfolio of all of USDA's relevant mission areas, including a discussion of relevant work, goals, and... as respond to a set of questions presented by the organizers which are aimed at getting feedback...

  5. [Pain caused by breeding: definition, judgment, pathogenesis].

    Science.gov (United States)

    Herzog, A

    1997-02-01

    Special terms of the "German Animal Protection Law (section 11b)"and the "European Agreement for Protection of Domestic Animals" particularly "torture-breeding, genetic characteristics, well-being, soundness, pains, injuries and specific use" are commented. Examples of torture-breedings are discussed: Dog (Merle-faktor, brachycephalie, atrichosis), cat (Mans-factor, W-gene, folded-ears), birds (tuffs, ear-drops, tailesness, hypertrophy of bill-warts, abnormal position of tarsal-joints, hypertrophy of imposing behavior).

  6. Breeding system and pollination biology of Crocus alatavicus(Iridaceae),a geocarpic subalpine plant of the western Tianshan Mountains%地下结实植物白番红花的繁育系统与传粉生物学

    Institute of Scientific and Technical Information of China (English)

    张洋; 谭敦炎

    2009-01-01

    Crocus alatavicus, a geophytic-geocarpic plant, is an early spring ephemeral species that grows in subalpine areas of the western Tianshan Mountains. To understand the ecological significance of geocarpy in plants, we studied the breeding system and pollination biology of C. alatavicus, with special reference to its adaptive strategies for a subalpine existence. We found that C. alatavicus is hysteranthous and its flowering pattern was explosive at the population level. It began to flower in early- to mid-April, and the white flowers had neither nectar nor scent. The inferior ovary was below ground at anthesis, while the other floral parts were aboveground. The flowers were open during the day and closed at night, and individual flower duration was 6-9 days. Pollen viability was 75.39 5.69% at the end of anthesis, and stigma receptivity lasted eight days. Results of artificial pollination experiments suggested that the breeding system of C. alatavicus is facultative xenogamy with the ability to self-pollinate spontaneously. Crocus alatavicus has a generalist pollination system, with Bombus lucorum, Anthophora senilis and Andrena capillosa being effective pollinators. These insects initiated pollination while foraging for pollen, and their visitation frequencies were 0.50±0.27, 0.18±0.08 and 0.13±0.05 per flower per hour, respectively. Thus, C. alatavicus not only has evolved unique flowering pattern and generalist pollination system, but also utilizes an otherwise vacant niche in the early spring to improve the effectiveness of pollination. Furthermore, characteristics of its breeding system, such as self-compatibility and spontaneous self-pollination, ensure reproductive success even when pollinators are scarce and pollinator visitation frequencies are low in early spring.%地下结实是植物用来防御不利环境的一种策略,研究地下结实植物的繁殖特性,可以揭示它们的繁殖对策多样性,对于探讨环境选择压力对其繁育系

  7. Testicular Histomorphometric Evaluation of Zebu Bull Breeds

    Directory of Open Access Journals (Sweden)

    Paulo Antônio Terrabuio Andreussi

    2014-12-01

    Full Text Available The objective of this study was to evaluate the quantitative histology and testicular biometrics in zebu bulls of different breeds. Testicular fragments of Nelore (n=10, Polled Nelore (n=6, Gir (n=5, Guzerat (n=5 and Tabapuã bulls (n=5 were used. The fragments were perfusion-fixed in Karnovsky solution, embedded in glycol methacrylate and stained with toluidine blue-1% sodium borate. The Nelore animals had a higher tubular volumetric proportion (85.2% and greater height of the seminiferous epithelium (73.2 µm than the Gir, Guzerat and Tabapuã breeds. The Nelore animals also had a higher volumetric proportion of Leydig cells (5.2% than the Guzerat and Tabapuã breeds. There was no significant difference for any of these parameters between the Nelore and Polled Nelore breeds. The gonadosomatic index, seminiferous tubule diameter, cross-sectional area of the seminiferous tubule and tubule length (total length and length per gram of testicular parenchyma did not vary among the breeds studied. The morphometric parameters evaluated suggested that the genetic selection applied to the Nelore and Polled Nelore breeds improved the efficiency of spermatogenesis in these breeders.

  8. Citrus breeding, genetics and genomics in Japan

    Science.gov (United States)

    Omura, Mitsuo; Shimada, Takehiko

    2016-01-01

    Citrus is one of the most cultivated fruits in the world, and satsuma mandarin (Citrus unshiu Marc.) is a major cultivated citrus in Japan. Many excellent cultivars derived from satsuma mandarin have been released through the improvement of mandarins using a conventional breeding method. The citrus breeding program is a lengthy process owing to the long juvenility, and it is predicted that marker-assisted selection (MAS) will overcome the obstacle and improve the efficiency of conventional breeding methods. To promote citrus molecular breeding in Japan, a genetic mapping was initiated in 1987, and the experimental tools and resources necessary for citrus functional genomics have been developed in relation to the physiological analysis of satsuma mandarin. In this paper, we review the progress of citrus breeding and genome researches in Japan and report the studies on genetic mapping, expression sequence tag cataloguing, and molecular characterization of breeding characteristics, mainly in terms of the metabolism of bio-functional substances as well as factors relating to, for example, fruit quality, disease resistance, polyembryony, and flowering. PMID:27069387

  9. Citrus breeding, genetics and genomics in Japan.

    Science.gov (United States)

    Omura, Mitsuo; Shimada, Takehiko

    2016-01-01

    Citrus is one of the most cultivated fruits in the world, and satsuma mandarin (Citrus unshiu Marc.) is a major cultivated citrus in Japan. Many excellent cultivars derived from satsuma mandarin have been released through the improvement of mandarins using a conventional breeding method. The citrus breeding program is a lengthy process owing to the long juvenility, and it is predicted that marker-assisted selection (MAS) will overcome the obstacle and improve the efficiency of conventional breeding methods. To promote citrus molecular breeding in Japan, a genetic mapping was initiated in 1987, and the experimental tools and resources necessary for citrus functional genomics have been developed in relation to the physiological analysis of satsuma mandarin. In this paper, we review the progress of citrus breeding and genome researches in Japan and report the studies on genetic mapping, expression sequence tag cataloguing, and molecular characterization of breeding characteristics, mainly in terms of the metabolism of bio-functional substances as well as factors relating to, for example, fruit quality, disease resistance, polyembryony, and flowering.

  10. Neutronic Comparison of Tritium-Breeding Performance of Candidate Tritium-Breeding Materials

    Institute of Scientific and Technical Information of China (English)

    郑善良; 吴宜灿

    2003-01-01

    Tritium self-sustainment, which will meet the fuel requirement of fusion reactor, isone of the key issues of fusion power development. The tritium breeding performances of varioustritium-breeding materials are compared based on a series of neutronics calculations using three-dimensional Monte Carlo neutron-photon transport code MCNP/4C with the IAEA FENDL-2data library. The effects of the dimensions of the tritium-breeding zone and the enrichment of 6Lion Tritium Breeding Ratio (TBR) are analyzed. The effects of Be as a neutron multiplier on TBRare also calculated.

  11. Breeding approaches and genomics technologies to increase crop yield under low-temperature stress.

    Science.gov (United States)

    Jha, Uday Chand; Bohra, Abhishek; Jha, Rintu

    2017-01-01

    Improved knowledge about plant cold stress tolerance offered by modern omics technologies will greatly inform future crop improvement strategies that aim to breed cultivars yielding substantially high under low-temperature conditions. Alarmingly rising temperature extremities present a substantial impediment to the projected target of 70% more food production by 2050. Low-temperature (LT) stress severely constrains crop production worldwide, thereby demanding an urgent yet sustainable solution. Considerable research progress has been achieved on this front. Here, we review the crucial cellular and metabolic alterations in plants that follow LT stress along with the signal transduction and the regulatory network describing the plant cold tolerance. The significance of plant genetic resources to expand the genetic base of breeding programmes with regard to cold tolerance is highlighted. Also, the genetic architecture of cold tolerance trait as elucidated by conventional QTL mapping and genome-wide association mapping is described. Further, global expression profiling techniques including RNA-Seq along with diverse omics platforms are briefly discussed to better understand the underlying mechanism and prioritize the candidate gene (s) for downstream applications. These latest additions to breeders' toolbox hold immense potential to support plant breeding schemes that seek development of LT-tolerant cultivars. High-yielding cultivars endowed with greater cold tolerance are urgently required to sustain the crop yield under conditions severely challenged by low-temperature.

  12. Strategy and Opportunity for The Development of Duck Breeding Farm

    Directory of Open Access Journals (Sweden)

    L Hardy Prasetyo

    2006-09-01

    Full Text Available The recent development of duck farming requires the availability of good quality breeding stocks commercially in order to improve productivity and efficiency . Presently, there is no commercial duck breeding farm which can produce good quality breeding stocks . This article presents information on alternatives in developing duck breeding farm, particularly for layer ducks . There are two alternative approaches in duck breeding farms : (1 Group breeding farm, which belongs to duck farmers' group, as part of a group production system, and (2 Commercial breeding farm, by an individual private company/Semi-Government Institution in a commercial scale and particularly for export market . A good breeding farm requires appropriate systems for selection and mating of the animals in order to guarantee the quality of the breeding stocks being produced . A breeding farm must be economically and technically feasible as an economic entity, so that economic analysis and marketing must be prepared seriously.

  13. Plant Phenotype Characterization System

    Energy Technology Data Exchange (ETDEWEB)

    Daniel W McDonald; Ronald B Michaels

    2005-09-09

    This report is the final scientific report for the DOE Inventions and Innovations Project: Plant Phenotype Characterization System, DE-FG36-04GO14334. The period of performance was September 30, 2004 through July 15, 2005. The project objective is to demonstrate the viability of a new scientific instrument concept for the study of plant root systems. The root systems of plants are thought to be important in plant yield and thus important to DOE goals in renewable energy sources. The scientific study and understanding of plant root systems is hampered by the difficulty in observing root activity and the inadequacy of existing root study instrumentation options. We have demonstrated a high throughput, non-invasive, high resolution technique for visualizing plant root systems in-situ. Our approach is based upon low-energy x-ray radiography and the use of containers and substrates (artificial soil) which are virtually transparent to x-rays. The system allows us to germinate and grow plant specimens in our containers and substrates and to generate x-ray images of the developing root system over time. The same plant can be imaged at different times in its development. The system can be used for root studies in plant physiology, plant morphology, plant breeding, plant functional genomics and plant genotype screening.

  14. Motives and values in farming local cattle breeds in Europe: a survey on 15 breeds

    NARCIS (Netherlands)

    Gandini, G.; Avon, L.; Bohte-Wilhelmus, D.I.; Bay, E.; Colinet, F.G.; Choroszy, Z.; Diaz, C.; Duclos, D.; Fernandez, J.; Gengler, N.; Hoving-Bolink, A.H.; Kearney, F.; Lilja, T.; Mäki-Tanila, A.; Martin-Collado, D.; Maurice - Van Eijndhoven, M.H.T.; Musella, M.; Pizzi, F.; Soini, K.; Toro, M.; Turri, F.; Viinalas, H.; Hiemstra, S.J.

    2010-01-01

    Within the EURECA project (Towards self-sustainable EUropean REgional CAttle breeds), we interviewed a total of 371 farmers of 15 local cattle breeds in eight European countries. Besides collecting data on farmers, land use, herd composition and economic role of cattle, we aimed at understanding far

  15. Breeding barnacle geese in Kolokolkova Bay, Russia : number of breeding pairs, reproductive success and morphology

    NARCIS (Netherlands)

    van der Jeugd, HP; Gurtovaya, E; Eichhorn, G; Litvin, KY; Mineev, OY; van Eerden, M

    2003-01-01

    We report the results of an expedition to a barnacle-goose (Branta leucopsis) breeding area in Kolokolkova Bay, west of the lower Pechora delta in northern Russia, undertaken in July 2002. In total, 6 breeding colonies were found within the study area, harbouring 1,324 nests. Mean clutch size was 2.

  16. Breeding programmes for smallholder sheep farming systems: II. Optimization of cooperative village breeding schemes.

    Science.gov (United States)

    Gizaw, S; van Arendonk, J A M; Valle-Zárate, A; Haile, A; Rischkowsky, B; Dessie, T; Mwai, A O

    2014-10-01

    A simulation study was conducted to optimize a cooperative village-based sheep breeding scheme for Menz sheep of Ethiopia. Genetic gains and profits were estimated under nine levels of farmers' participation and three scenarios of controlled breeding achieved in the breeding programme, as well as under three cooperative flock sizes, ewe to ram mating ratios and durations of ram use for breeding. Under fully controlled breeding, that is, when there is no gene flow between participating (P) and non-participating (NP) flocks, profits ranged from Birr 36.9 at 90% of participation to Birr 21.3 at 10% of participation. However, genetic progress was not affected adversely. When there was gene flow from the NP to P flocks, profits declined from Birr 28.6 to Birr -3.7 as participation declined from 90 to 10%. Under the two-way gene flow model (i.e. when P and NP flocks are herded mixed in communal grazing areas), NP flocks benefited from the genetic gain achieved in the P flocks, but the benefits declined sharply when participation declined beyond 60%. Our results indicate that a cooperative breeding group can be established with as low as 600 breeding ewes mated at a ratio of 45 ewes to one ram, and the rams being used for breeding for a period of two years. This study showed that farmer cooperation is crucial to effect genetic improvement under smallholder low-input sheep farming systems.

  17. Production system and participatory identification of breeding objective traits for indigenous goat breeds of Uganda

    NARCIS (Netherlands)

    Onzima, R.B.; Gizaw, S.; Kugonza, D.R.; Arendonk, van J.A.M.; Kanis, E.

    2017-01-01

    The success of breeding programs in improving indigenous livestock breeds in Uganda has hitherto been limited due to lack of involvement of the key stakeholders. Thus, participatory approaches are being promoted for designing community based improvement programs. The aim of this study was to

  18. Participatory definition of breeding objectives and selection indexes for sheep breeding in traditional systems

    NARCIS (Netherlands)

    Gizaw, S.; Lemma, S.; Komen, J.; Arendonk, van J.A.M.

    2010-01-01

    A farmer participatory approach was used to define breeding objectives and selection indexes for short-fat-tailed sheep in sheep–barley systems and Black Head Somali sheep in pastoral systems in Ethiopia. Breeding-objective traits were identified based on producers' preferences for traits collected

  19. Floral display and breeding system of Jatropha curcas L.

    Institute of Scientific and Technical Information of China (English)

    Luo Chang-wei; Li Kun; Chen You; Sun Yong-yu

    2007-01-01

    Plant flowering and breeding characteristics are important for us to understand the reproduction of plant populations. In this paper, we studied the reproduction characteristics of Jatropha curcas in Yuanjiang County (23°36'N, 101°00'E), Yunnan Province.The plant produces flowers in dichasial inflorescences. Normally, the flowers are unisexual, and male and female flowers are produced in the same inflorescence. Only a few male flowers are produced in an inflorescence, and fruits are produced only through pollination between different flowers from the same or different plants. By the treatments of emasculation, bagging and artificial pollination in this experiment, there were few but same fruit set ratios when the inflorescences were emasculated, bagged, or bagged with net, except artificial pollination treatments, which showed that Jatropha curcas could produce fruit through apomixis but not wind pollination. When the inflorescences were unbagged, unemasculated and with free pollination treatments, or bagged, emasculated and with artificial cross-pollination treatments, or unbagged, emasculated and with free pollination treatments, there were many fruits produced. It showed that Jatropha curcas shows outcrossing, is self-compatible, and demanding for pollinators. Normally, the male flowers open first and a few flowers bloom in one day in a raceme. These flowers last a long time in bloom. However, a large number of female flowers open from the third to the fifth day, with some female flowers opening first in a few raceme. This shows a tendency to promote xenogamy and minimize geitonogamy.

  20. The sub-annual breeding cycle of a tropical seabird.

    Science.gov (United States)

    Reynolds, S James; Martin, Graham R; Dawson, Alistair; Wearn, Colin P; Hughes, B John

    2014-01-01

    Breeding periodicity allows organisms to synchronise breeding attempts with the most favourable ecological conditions under which to raise offspring. For most animal species, ecological conditions vary seasonally and usually impose an annual breeding schedule on their populations; sub-annual breeding schedules will be rare. We use a 16-year dataset of breeding attempts by a tropical seabird, the sooty tern (Onychoprion fuscatus), on Ascension Island to provide new insights about this classical example of a population of sub-annually breeding birds that was first documented in studies 60 years previously on the same island. We confirm that the breeding interval of this population has remained consistently sub-annual. By ringing >17,000 birds and re-capturing a large sample of them at equivalent breeding stages in subsequent seasons, we reveal for the first time that many individual birds also consistently breed sub-annually (i.e. that sub-annual breeding is an individual as well as a population breeding strategy). Ascension Island sooty terns appear to reduce their courtship phase markedly compared with conspecifics breeding elsewhere. Our results provide rare insights into the ecological and physiological drivers of breeding periodicity, indicating that reduction of the annual cycle to just two life-history stages, breeding and moult, is a viable life-history strategy and that moult may determine the minimum time between breeding attempts.

  1. EFFECT OF BREED, SEX AND SOURCE WITHIN BREED ON THE HEAMATOGICAL PARAMETERS OF THE NIGERIAN GOATS

    Directory of Open Access Journals (Sweden)

    J.C. OKONKWO

    2011-01-01

    Full Text Available Effect of breed, sex and source within breed, together with their interactions on the haematological parameters of Nigerian goats were studied using 81 goats (comprising 9 males and 18 females per breed, objective being to characterize and outline the differences and similarities between the breeds in blood parameters. The goats were derived from different geo-ecological zones in the country based on the areas of preponderance of each breed. The breeds studied were: the Sahel goat (SG, Red Sokoto goat (RSG, and West African Dwarf goat (WADG and hematological values obtained per breed were: 22.52±1.48, 23.04±3.56, and 29.22±4.76 (%PCV; 7.52±0.50, 7.82±1.25 and 9.48±1.60 (g/dl Hb; 2.71±0.23, 3.09±0.64, and 4.10±0.42 (x1012/l RBC; 11.94±1.10, 11.32±2.03 and 9.23±0.63 (x109cells/l WBC, and 83.22±1.67, 76.72±2.30 and 73.34±3.40 (x106/mm3 MCV, respectively. Significant differences (P0.05 for all the breeds. The WADGs were superior to the RSGs and SGs in PCV, Hb, and RBC counts, but lower in WBC counts and MCV. The SGs were similar in most of the haematological profiles examined, irrespective of geo-ecological distance, indicating homogeneity of the breed. The sahelian goat breed also outscored other breeds in MCV, showing that the breed has greater propensity to transport oxygen and in situation occasioning oxygen starvation, the breed survives better. This explains the reason for the survival of the breed in arid and semi-arid zone. Gender has no effect on the MCV and the values of 83.22±1.67x106/mm3, 76.72±2.30x106/mm3 and 73.34±3.40x106/mm3 were observed for the SG, RSG, and WADG, respectively.

  2. Understanding relations between breeding bird species and extreme weather

    Science.gov (United States)

    Allstadt, A.; Bateman, B.; Pidgeon, A. M.; Radeloff, V.; Vavrus, S. J.; Keuler, N.; Clayton, M.; Albright, T.; Thogmartin, W.; Heglund, P.

    2013-12-01

    Extreme weather events are increasing in frequency due to climate change. Extreme weather events like periods of drought or cold snaps may impose hardship on many animal and plant populations. However, little is known about biotic response to extreme events. For example, some species experience population size changes in association with extreme weather, and some do not. However the mechanisms responsible for observed declines in avian abundance following heat waves and drought are not clear. Our goal was to characterize the population changes of North American bird species in relation to temperature and precipitation extremes using North American Breeding Bird Survey (BBS) data. We derived standardized measures of extreme precipitation and air temperature based on phase 2 NASA Land Data Assimilation System (NLDAS-2), an hourly 1/8 degree resolution land surface forcing dataset, and modeled population responses, during the breeding season, of 363 bird species. Of those species in which a change was observed, many demonstrated decreases in total population size, suggesting either mortality or reproductive failure (or both) are the causative mechanisms of this decline. A greater proportion of population changes were associated with extreme conditions in the same year than in the previous year. Some species exhibited population decreases in areas of extreme weather and increases in areas with environmental conditions more favorable to breeding while overall abundance remained relatively constant, which might indicate movement. The patterns of bird population changes in relation to extreme weather events provide insight for planners as they consider modifications to our national protected area network that will limit threats posed by climate change to bird populations.

  3. Corneal sensitivity in five horse breeds

    Directory of Open Access Journals (Sweden)

    Eunice Santos de Andrade

    Full Text Available ABSTRACT: This study aimed to determine and compare corneal sensitivity values in different regions of the cornea in five horse breeds. One hundred and forty five healthy horses, adults of both sexes, of the following breeds - Arabian horse (AH; n=20, Mangalarga Marchador (MM; n=50, Pure Blood Lusitano (PBL; n=35, Quarter Horse (QH; n=20, Brazilian Sport Horse (BSH; n=20-were investigated. Corneal touch threshold (CTT was measured with a Cochet-Bonnet esthesiometer in five different corneal regions. Measurements of the median central CTT were: 4.50±0.50cm (AH, 3.50±0.56cm (MM, 3.00±0.25cm (PBL, 2.50±0.44cm (QH and 2.50±0.00cm (BSH. The central region was the most sensitive and the dorsal region the least sensitive corneal region for all breeds. CTT values differed for corneal regions and horse breeds. The CTT values were different among the corneal regions and the horse breeds. Arabian horses presented higher sensitivity values being the most sensitive in all of the corneal regions.

  4. Resistance Genes in Global Crop Breeding Networks.

    Science.gov (United States)

    Garrett, K A; Andersen, K F; Asche, F; Bowden, R L; Forbes, G A; Kulakow, P A; Zhou, B

    2017-08-31

    Resistance genes are a major tool for managing crop diseases. The networks of crop breeders who exchange resistance genes and deploy them in varieties help to determine the global landscape of resistance and epidemics, an important system for maintaining food security. These networks function as a complex adaptive system, with associated strengths and vulnerabilities, and implications for policies to support resistance gene deployment strategies. Extensions of epidemic network analysis can be used to evaluate the multilayer agricultural networks that support and influence crop breeding networks. Here, we evaluate the general structure of crop breeding networks for cassava, potato, rice, and wheat. All four are clustered due to phytosanitary and intellectual property regulations, and linked through CGIAR hubs. Cassava networks primarily include public breeding groups, whereas others are more mixed. These systems must adapt to global change in climate and land use, the emergence of new diseases, and disruptive breeding technologies. Research priorities to support policy include how best to maintain both diversity and redundancy in the roles played by individual crop breeding groups (public versus private and global versus local), and how best to manage connectivity to optimize resistance gene deployment while avoiding risks to the useful life of resistance genes. [Formula: see text] Copyright © 2017 The Author(s). This is an open access article distributed under the CC BY 4.0 International license .

  5. [Historic treasures of Swiss horse breeding].

    Science.gov (United States)

    Meier, H

    2017-01-01

    Both a mandate of the Bernese Government (1705) and statements in the Georgica Helvetica of 1706 prove that Swiss horse breeding was lucrative and of good quality at that time. However, the political turmoil at the transition from the 18th to 19th century and excessive sales to France and Italy led to a severe drop in quantity as well in quality. The exhibition of horses in Aarau in 1865 showed a wretched state of the material. In the same year, Rudolf Zangger wrote a guide for the discussion of horse breeding in Switzerland. In the following year (1866), Johann Jakob Rychner published a report on horse breeding, and a further treatise on Swiss horse breeding by Johann Heinrich Hirzel followed in 1883. These publications created good and comprehensive fundamentals, which can still be considered valid. However history shows that the results and recommendations of these analyses barely led to improvements. Todays genomics with their possibilities open up a new era of animal breeding and raise bigger demands than ever.

  6. [Mendelism in animal breeding as developed by professor Leopold Frateur, Louvain (1877-1946)].

    Science.gov (United States)

    Gobin, A

    2000-01-01

    Educated as a veterinarian at Cureghem, Leopold Frateur started his scientific career in 1899 as a professor at the Faculty of Sciences of the Catholic University of Louvain, Belgium, in charge of the course in zootechnology. After a study tour to zootechnical institutes and centres of animal breeding in Europe he was invited by the governmental department of Agriculture and the Belgian Society of Zootechnology to investigate the relevance of the Mendelian laws of heredity for the improvement of cattle breeding. In the early years of the century, Frateur conducted field research in order to determine the characteristics of the cattle breeds in Belgium. In 1908 Frateur founded the Institute of Animal Husbandry at his university. Here he worked out his programme of experimental genetics until his retirement in 1936. The last six years of his professorship he teached also agricultural economics in the Faculty of Economical Sciences. In Frateur's experimental research the following main lines can be distinguished: 1) The analysis of simple and complex hereditary factors in cattle, rabbits and poultry; 2) The study of qualitative and quantitative characteristics of importance for the improvement of animal breeds; 3) The synthesis of genetic factors from different stock in order to obtain higher yielding breeds with stable characteristics; 4) Theoretical study of the relationship between genotype and phenotype and the influence of environment factors; 5) Theoretical exploration of the issue of variability and modification of newly formed characteristics; 6) Research leading to an explanation of telegony and atavism; 7) The formulation of a theory on the creation of new breeds in domestic animals and plants, and the relation between breed and species. Also he was responding to topical needs, e.g. he determined the causal factor of pullorum epidemic in chicken farming, or he investigated the hereditary resistance against diphteric infection amongst chickens. Frateur took

  7. Breeding cereal crops for enhanced weed suppression: optimizing allelopathy and competitive ability.

    Science.gov (United States)

    Worthington, Margaret; Reberg-Horton, Chris

    2013-02-01

    Interest in breeding grain crops with improved weed suppressive ability is growing in response to the evolution and rapid expansion of herbicide resistant populations in major weeds of economic importance, environmental concerns, and the unmet needs of organic producers and smallholder farmers without access to herbicides. This review is focused on plant breeding for weed suppression; specifically, field and laboratory screening protocols, genetic studies, and breeding efforts that have been undertaken to improve allelopathy and competition in rice, wheat, and barley. The combined effects of allelopathy and competition determine the weed suppressive potential of a given cultivar, and research groups worldwide have been working to improve both traits simultaneously to achieve maximum gains in weed suppression. Both allelopathy and competitive ability are complex, quantitatively inherited traits that are heavily influenced by environmental factors. Thus, good experimental design and sound breeding procedures are essential to achieve genetic gains. Weed suppressive rice cultivars are now commercially available in the U.S. and China that have resulted from three decades of research. Furthermore, a strong foundation has been laid during the past 10 years for the breeding of weed suppressive wheat and barley cultivars.

  8. Selective breeding for scrapie resistance in sheep

    Directory of Open Access Journals (Sweden)

    Cristina Santos Sotomaior

    2012-11-01

    Full Text Available It is well known that the susceptibility of sheep to scrapie is determined by the host’s prion protein gene (PRNP. PRNP polymorphisms at codons 136 (alanine, A/valine, V, 154 (histidine, H/arginine, R and 171 (glutamine, Q/histidine, H/arginine, R are the main determinants of sheep susceptibility/resistance to classical scrapie. There are four major variants of the wild-type ARQ allele: VRQ, AHQ, ARH and ARR. Breeding programs have been developed in the European Union and the USA to increase the frequency of the resistant ARR allele while decreasing the frequency of the susceptible VRQ allele in sheep populations. In Brazil, little PRNP genotyping data are available for sheep, and thus far, no controlled breeding scheme for scrapie has been implemented. This review will focus on important epidemiological aspects of scrapie and the use of genetic resistance as a tool in breeding programs to control the disease.

  9. Genome-wide association mapping for yield and other agronomic traits in an elite breeding population of tropical rice (Oryza sativa).

    Science.gov (United States)

    Begum, Hasina; Spindel, Jennifer E; Lalusin, Antonio; Borromeo, Teresita; Gregorio, Glenn; Hernandez, Jose; Virk, Parminder; Collard, Bertrand; McCouch, Susan R

    2015-01-01

    Genome-wide association mapping studies (GWAS) are frequently used to detect QTL in diverse collections of crop germplasm, based on historic recombination events and linkage disequilibrium across the genome. Generally, diversity panels genotyped with high density SNP panels are utilized in order to assay a wide range of alleles and haplotypes and to monitor recombination breakpoints across the genome. By contrast, GWAS have not generally been performed in breeding populations. In this study we performed association mapping for 19 agronomic traits including yield and yield components in a breeding population of elite irrigated tropical rice breeding lines so that the results would be more directly applicable to breeding than those from a diversity panel. The population was genotyped with 71,710 SNPs using genotyping-by-sequencing (GBS), and GWAS performed with the explicit goal of expediting selection in the breeding program. Using this breeding panel we identified 52 QTL for 11 agronomic traits, including large effect QTLs for flowering time and grain length/grain width/grain-length-breadth ratio. We also identified haplotypes that can be used to select plants in our population for short stature (plant height), early flowering time, and high yield, and thus demonstrate the utility of association mapping in breeding populations for informing breeding decisions. We conclude by exploring how the newly identified significant SNPs and insights into the genetic architecture of these quantitative traits can be leveraged to build genomic-assisted selection models.

  10. ALTERNATIVES TO IMPROVE HYBRIDIZATION EFFICIENCY IN Eucalyptus BREEDING PROGRAMS

    Directory of Open Access Journals (Sweden)

    Roselaine Cristina Pereira

    2002-01-01

    Full Text Available Simple and quick hybridization procedures and ways to keep pollen grains viable for long periods are sought in plant breeding programs to provide greater work flexibility. The presentstudy was carried out to assess the efficiency of pollinations made shortly after flower emasculationand the viability of stored pollen from Eucalyptus camaldulensis and Eucalyptus urophylla clones cultivated in Northwestern Minas Gerais State. Controlled pollinations were carried out at zero, one,three, five and seven days after emasculation. Hybridization efficiency was assessed by thepercentage of viable fruits, number of seeds produced per fruit, percentage of viable seeds and also bycytological observation of the pollen development along the style. Flower buds from clones of the twospecies were collected close to anthesis to assess the viability of pollen grain storage. Pollen was thencollected and stored in a freezer (-18oC for 1, 2 and 3 months. Pollen assessed was carried out by invitro and in vivo germination tests. The efficiency of the pollinations varied with their delay and alsobetween species. The greatest pollination efficiency was obtained when they were carried out on thethird and fifth day after emasculation, but those performed simultaneously with emasculationproduced enough seeds to allow this practice in breeding programs. The decrease in pollen viabilitywith storage was not sufficiently significant to preclude the use of this procedure in artificialhybridization.

  11. Common bean breeding to improve red grain lines

    Directory of Open Access Journals (Sweden)

    José Ângelo Nogueira de Menezes Júnior

    2011-01-01

    Full Text Available The purpose of this study was to evaluate the performance potential of red bean lines, derived from populations ofthe first cycle of recurrent selection in the common bean breeding program of the Federal University of Viçosa, Minas Gerais. In theF3:5, F3:6 and F3:7 generations, 243 families from 18 segregating populations were evaluated. These families were conducted by thebulk-within-families method and from the best, 154 lines were obtained and evaluated in the dry season of 2006 (F7: 9 and of 2007(F7: 10, Coimbra - MG. The estimates of genetic and phenotypic parameters revealed variability among families. The method bulkwithin F3-derived families proved useful for bean breeding. The most promising lines that may be included in future tests of valuefor cultivation and use (VCU, and will possibly be recommended for planting in the state of Minas Gerais, were derived from thepopulations Vermelhinho/AN9022180//Vermelhinho/Vermelho2157, Vermelhinho//Vermelhinho/ IAPAR81,Vermelhinho/LR720982//Vermelhinho/AB136 and Vermelhinho/AB136//Vermelhinho/ Vermelho2157.

  12. Genomic resources in mungbean for future breeding programs

    Directory of Open Access Journals (Sweden)

    Sue K Kim

    2015-08-01

    Full Text Available Among the legume family, mungbean (Vigna radiata has become one of the important crops in Asia, showing a steady increase in global production. It provides a good source of protein and contains most notably folate and iron. Beyond the nutritional value of mungbean, certain features make it a well-suited model organism among legume plants because of its small genome size, short life-cycle, self-pollinating, and close genetic relationship to other legumes. In the past, there have been several efforts to develop molecular markers and linkage maps associated with agronomic traits for the genetic improvement of mungbean and, ultimately, breeding for cultivar development to increase the average yields of mungbean. The recent release of a reference genome of the cultivated mungbean (V. radiata var. radiata VC1973A and an additional de novo sequencing of a wild relative mungbean (V. radiata var. sublobata has provided a framework for mungbean genetic and genome research, that can further be used for genome-wide association and functional studies to identify genes related to specific agronomic traits. Moreover, the diverse gene pool of wild mungbean comprises valuable genetic resources of beneficial genes that may be helpful in widening the genetic diversity of cultivated mungbean. This review paper covers the research progress on molecular and genomics approaches and the current status of breeding programs that have developed to move toward the ultimate goal of mungbean improvement.

  13. Precision breeding of grapevine (Vitis vinifera L.) for improved traits.

    Science.gov (United States)

    Gray, Dennis J; Li, Zhijian T; Dhekney, Sadanand A

    2014-11-01

    This review provides an overview of recent technological advancements that enable precision breeding to genetically improve elite cultivars of grapevine (Vitis vinifera L.). Precision breeding, previously termed "cisgenic" or "intragenic" genetic improvement, necessitates a better understanding and use of genomic resources now becoming accessible. Although it is now a relatively simple task to identify genetic elements and genes from numerous "omics" databases, the control of major agronomic and enological traits often involves the currently unknown participation of many genes and regulatory machineries. In addition, genetic evolution has left numerous vestigial genes and sequences without tangible functions. Thus, it is critical to functionally test each of these genetic entities to determine their real-world functionality or contribution to trait attributes. Toward this goal, several diverse techniques now are in place, including cell culture systems to allow efficient plant regeneration, advanced gene insertion techniques, and, very recently, resources for genomic analyses. Currently, these techniques are being used for high-throughput expression analysis of a wide range of grapevine-derived promoters and disease-related genes. It is envisioned that future research efforts will be extended to the study of promoters and genes functioning to enhance other important traits, such as fruit quality and vigor.

  14. Role of classical breeding in improvement of pulse crops

    Directory of Open Access Journals (Sweden)

    N. Nadarajan and Sanjeev Gupta

    2010-07-01

    Full Text Available Classical breeding of many crops has been instrumental for ensuring food security by developing new varieties that are higheryielding,resistant to pests and diseases, drought-resistant or regionally adapted to different environments and growingconditions. A total of 513 cultivars of different pulse crops including chickpea, pigeonpea, mungbean, urdbean, lentil, fieldpeaand rajmash were developed in India itself during last three decades. Adoption of high yielding varieties in early 1980'sincreased the average productivity of the country by 34 % now. Significant achievements have been made in developing shortduration cultivars in almost all pulse crops with incorporation of photo- thermo insensitivity. Genetic resistance for most of thediseases have been identified and incorporated in development of disease resistant cultivars. In fieldpea, a major breakthroughhas been made by developing dwarf and afila plant type which led to increase in yield by 30%. Although cultivar developmenthas traditionally emphasized improvement through pedigree selection, mass –pedigree method and backcross breeding,interspecific hybridization has also received much attention in 1980s. So far eight genotypes in different pulse crops have beendeveloped in the country using interspecific hybridization. In pigeonpea a trait cytoplasmic male sterility has been introducedthrough wild gene introgression. Using this, a hybrid GTH 1 in pigeonpea has been developed in India which has yielded 27%yield superiority than the traditional cultivars.

  15. Under-forest Breeding Pattern and the Practice Form

    Institute of Scientific and Technical Information of China (English)

    SHEN Zhong-ming

    2012-01-01

    Through the development in recent years, China’s under-forest breeding pattern can be divided into four kinds of practice form of under-forest breeding pattern (the pattern of breeding driven by leading enterprises; the pattern of breeding driven by intermediary economic organizations; the pattern of breeding driven by the professional wholesale market; the pattern of breeding driven by the modern animal husbandry demonstration areas), according to difference in the main body participating in signing the operation contract in breeding pattern. In the production practice of under-forest breeding pattern, the most widely used and successful pattern is the pattern of breeding driven by leading enterprises and its derivative forms.

  16. Influence of pollination specialization and breeding system on floral integration and phenotypic variation in Ipomoea.

    Science.gov (United States)

    Rosas-Guerrero, Víctor; Quesada, Mauricio; Armbruster, W Scott; Pérez-Barrales, Rocío; Smith, Stacey DeWitt

    2011-02-01

    Natural selection should reduce phenotypic variation and increase integration of floral traits involved in placement of pollen grains on stigmas. In this study, we examine the role of pollinators and breeding system on the evolution of floral traits by comparing the patterns of floral phenotypic variances and covariances in 20 Ipomoea species that differ in their level of pollination specialization and pollinator dependence incorporating phylogenetic relatedness. Plants with specialized pollination (i.e., those pollinated by one functional group or by few morphospecies) displayed less phenotypic variation and greater floral integration than generalist plants. Self-compatible species also displayed greater floral integration than self-incompatible species. Floral traits involved in pollen placement and pick up showed less variation and greater integration than floral traits involved in pollinator attraction. Analytical models indicate that both breeding system and the number of morphospecies had significant effects on floral integration patterns although only differences in the former were significant after accounting for phylogeny. These results suggest that specialist/self-compatible plants experience more consistent selection on floral traits than generalist/self-incompatible plants. Furthermore, pollinators and breeding system promote integration of floral traits involved in pollen placement and pick up rather than integration of the whole flower. © 2010 The Author(s). Evolution© 2010 The Society for the Study of Evolution.

  17. Resistance to Aspergillus flavus in maize and peanut: Molecular biology, breeding, environmental stress, and future perspectives

    Directory of Open Access Journals (Sweden)

    Jake C. Fountain

    2015-06-01

    Full Text Available The colonization of maize (Zea mays L. and peanut (Arachis hypogaea L. by the fungal pathogen Aspergillus flavus results in the contamination of kernels with carcinogenic mycotoxins known as aflatoxins leading to economic losses and potential health threats to humans. The regulation of aflatoxin biosynthesis in various Aspergillus spp. has been extensively studied, and has been shown to be related to oxidative stress responses. Given that environmental stresses such as drought and heat stress result in the accumulation of reactive oxygen species (ROS within host plant tissues, host-derived ROS may play an important role in cross-kingdom communication between host plants and A. flavus. Recent technological advances in plant breeding have provided the tools necessary to study and apply knowledge derived from metabolomic, proteomic, and transcriptomic studies in the context of productive breeding populations. Here, we review the current understanding of the potential roles of environmental stress, ROS, and aflatoxin in the interaction between A. flavus and its host plants, and the current status in molecular breeding and marker discovery for resistance to A. flavus colonization and aflatoxin contamination in maize and peanut. We will also propose future directions and a working model for continuing research efforts linking environmental stress tolerance and aflatoxin contamination resistance in maize and peanut.

  18. Optimized breeding strategies for multiple trait integration: II. Process efficiency in event pyramiding and trait fixation.

    Science.gov (United States)

    Peng, Ting; Sun, Xiaochun; Mumm, Rita H

    2014-01-01

    as well as seed chipping and tissue sampling approaches to facilitate genotyping. With selfing approaches, two generations of selfing rather than one for trait fixation (i.e. 'F2 enrichment' as per Bonnett et al. in Strategies for efficient implementation of molecular markers in wheat breeding. Mol Breed 15:75-85, 2005) were utilized to eliminate bottlenecking due to extremely low frequencies of desired genotypes in the population. The efficiency indicators such as total number of plants grown across generations, total number of marker data points, total number of generations, number of seeds sampled by seed chipping, number of plants requiring tissue sampling, and number of pollinations (i.e. selfing and crossing) were considered in comparisons of breeding strategies. A breeding strategy involving seed chipping and a two-generation selfing approach (SC + SELF) was determined to be the most efficient breeding strategy in terms of time to market and resource requirements. Doubled haploidy may have limited utility in trait fixation for MTI under the defined breeding scenario. This outcome paves the way for optimizing the last step in the MTI process, version testing, which involves hybridization of female and male RP conversions to create versions of the converted hybrid for performance evaluation and possible commercial release.

  19. 辽宁杂交粳稻育种有关问题探讨%On the Problems in Japonica Hybrid Rice Breeding in Liaoning On the Problems in Japonica Hybrid Rice Breeding in Liaoning On the Problems in Japonica Hybrid Rice Breeding in Liaoning On the Problems in Japonica Hybrid Rice Breeding in Liaoning

    Institute of Scientific and Technical Information of China (English)

    华泽田; 王彦荣; 王岩; 蔡伟; 代贵金; 郝宪彬

    2001-01-01

    针对目前北方杂交粳稻发展中存在的问题,笔者结合自己多年的育种实践,提出了杂交粳稻育种的研究方向和技术路线。%In view of the existing problems in the development of japonica hybrid rice in Northern China, the authors proposed the research orientation and technical approaches for japonica hybrid rice breeding on the basis of the breeding practices of many years. a) Correctly understand and utilize heterosis in rice. By way of raising yield potential of both parents and making use of the additive effects of genes to increase the standard heterosis of F1 hybrids; To improve grain quality of F1 hybrids, the breeding of quality parents should be intensified because of the negative heterosis in some grain quality characters. b) Ideal plant type should be paid more attention to in japonica hybrid rice breeding. The plant types of both parents should be favourable not only to a full play of F1 heterosis but also to hybrid seed production. c) Explore new germplasms such as japonica male sterile lines with dominant semi-dwarf genes and transgenic herbicide-resistant japonica restorer and enhance the use of them.

  20. The breeding biology of Red-Whiskered Bulbul (Pycnonotus jocosus) in Xishuangbanna, southwest China.

    Science.gov (United States)

    Li, Huan; Zhang, Ming-Xia; Yang, Xiao-Jun; Cui, Liang-Wei; Quan, Rui-Chang

    2015-07-18

    To fill the gap in breeding biology information about the Red-Whiskered Bulbul (Pycnonotus jocosus), in 2013, we studied the breeding biology of this species in Xishuangbanna, southwest China. The breeding began from February and continued until early August. The breeding strategy of P. jocosus was more flexible and their nests were only built in cultivated landscapes, whereas, no nest building in native tropical rain forest was found. Small open cup nests were built on 50 different plant species, and at heights ranging from 2.1±0.6 m above the ground (n=102). The mean clutch size was 2.53±0.51 eggs (n=40) and the mean egg mass was 2.81±0.25 g (n=60). The average incubation period was 11.1±0.5 days (n=14), and the average nestling period was 11.0±0.8 days (n=31). The overall nest success was 34.22%.The hatching and fledging showed either asynchrony or synchrony. Invertebrate food decreased with nestling age, whereas, plant food increased with nestling age. Moreover, distinct parental roles of the parents in nestling period were found. Compared with other passerine species, P. jocosus spent less time in incubating (58%). The clutch size, incubation and nestling period of the P. jocosus in southwest China were different from those of the P. jocosus in India.

  1. Estimating superpopulation size and annual probability of breeding for pond-breeding salamanders

    Science.gov (United States)

    Kinkead, K.E.; Otis, D.L.

    2007-01-01

    It has long been accepted that amphibians can skip breeding in any given year, and environmental conditions act as a cue for breeding. In this paper, we quantify temporary emigration or nonbreeding probability for mole and spotted salamanders (Ambystoma talpoideum and A. maculatum). We estimated that 70% of mole salamanders may skip breeding during an average rainfall year and 90% may skip during a drought year. Spotted salamanders may be more likely to breed, with only 17% avoiding the breeding pond during an average rainfall year. We illustrate how superpopulations can be estimated using temporary emigration probability estimates. The superpopulation is the total number of salamanders associated with a given breeding pond. Although most salamanders stay within a certain distance of a breeding pond for the majority of their life spans, it is difficult to determine true overall population sizes for a given site if animals are only captured during a brief time frame each year with some animals unavailable for capture at any time during a given year. ?? 2007 by The Herpetologists' League, Inc.

  2. Costs Associated with Equine Breeding in Kentucky

    Science.gov (United States)

    Walker, Cassandra L.

    There were approximately 9 million horses in the United States having a 102 billion impact on the U.S. economy (AHC, 2005). Over 1 million of those horses were involved in the breeding sector. In Kentucky, nearly 18% of the horse population have been involved in breeding. Managing an equine enterprise can be difficult, particularly given that many who undertake such endeavors do not have a background or education in business management. Kentucky Cooperative Extension has produced interactive spreadsheets to help horse owners better understand the costs associated with owning horses or managing certain equine businesses, including boarding and training operations. However, there has been little support for breeders. Therefore, the objectives of this study were to provide owners with a list of services offered for breeding and the costs associated with those services. Survey questions were created from a list of topics pertinent to equine breeding and from that list of questions, an electronic survey was created. The survey was sent via Qualtrics Survey Software to collect information on stallion and mare management costs as well as expenses related to owning and breeding. Question topics included veterinary and housing costs, management and advertising expenses, and membership fees. A total of 78 farms were selected from the 2013 breeder's listings for the Kentucky Quarter Horse Association (n = 39) and the Kentucky Thoroughbred Farm Managers' Club (n = 26), and other breed association contacts (n = 13). These farms were selected from the lists by outside individuals who were not related to the project. Participants were asked to answer all questions relevant to the farm. After the initial survey distribution, follow-up e-mails and phone calls were conducted in order to answer any questions participants might have had about the survey. Survey response rate was 32.1% (25 of 78 surveys returned). Farms in Kentucky had an average of two farm-owned and two outside

  3. Molecular Breeding for Improved Second Generation Bioenergy Crops.

    Science.gov (United States)

    Allwright, Mike R; Taylor, Gail

    2016-01-01

    There is increasing urgency to develop and deploy sustainable sources of energy to reduce our global dependency on finite, high-carbon fossil fuels. Lignocellulosic feedstocks, used in power and liquid fuel generation, are valuable sources of non-food plant biomass. They are cultivated with minimal inputs on marginal or degraded lands to prevent competition with arable agriculture and offer significant potential for sustainable intensification (the improvement of yield without the necessity for additional inputs) through advanced molecular breeding. This article explores progress made in next generation sequencing, advanced genotyping, association genetics, and genetic modification in second generation bioenergy production. Using poplar as an exemplar where most progress has been made, a suite of target traits is also identified giving insight into possible routes for crop improvement and deployment in the immediate future.

  4. Cassava Genetic Transformation and its Application in Breeding

    Institute of Scientific and Technical Information of China (English)

    Jia Liu; Qijie Zheng; Qiuxiang Ma; Kranthi Kumar Gadidasu; Peng Zhang

    2011-01-01

    As a major source of food, cassava (Manihot esculenta Crantz) is an important root crop in the tropics and subtropics of Africa and Latin America, and serves as raw material for the production of starches and bioethanol in tropical Asia. Cassava improvement through genetic engineering not only overcomes the high heterozygosity and serious trait separation that occurs in its traditional breeding, but also quickly achieves improved target traits. Since the first report on genetic transformation in cassava in 1996, the technology has gradually matured over almost 15 years of development and has overcome cassava genotype constraints, changing from mode cultivars to farmer-preferred ones.Significant progress has been made in terms of an increased resistance to pests and diseases, biofortification, and improved starch quality,building on the fundamental knowledge and technologies related to planting, nutrition, and the processing of this important food crop that has often been neglected. Therefore, cassava has great potential in food security and bioenergy development worldwide.

  5. Field high-throughput phenotyping: the new crop breeding frontier.

    Science.gov (United States)

    Araus, José Luis; Cairns, Jill E

    2014-01-01

    Constraints in field phenotyping capability limit our ability to dissect the genetics of quantitative traits, particularly those related to yield and stress tolerance (e.g., yield potential as well as increased drought, heat tolerance, and nutrient efficiency, etc.). The development of effective field-based high-throughput phenotyping platforms (HTPPs) remains a bottleneck for future breeding advances. However, progress in sensors, aeronautics, and high-performance computing are paving the way. Here, we review recent advances in field HTPPs, which should combine at an affordable cost, high capacity for data recording, scoring and processing, and non-invasive remote sensing methods, together with automated environmental data collection. Laboratory analyses of key plant parts may complement direct phenotyping under field conditions. Improvements in user-friendly data management together with a more powerful interpretation of results should increase the use of field HTPPs, therefore increasing the efficiency of crop genetic improvement to meet the needs of future generations.

  6. Phloem-mobile signals affecting flowers: applications for crop breeding.

    Science.gov (United States)

    McGarry, Roisin C; Kragler, Friedrich

    2013-04-01

    Transport of endogenous macromolecules within and between tissues serves as a signaling pathway to regulate numerous aspects of plant growth. The florigenic FT gene product moves via the phloem from leaves to apical tissues and induces the flowering program in meristems. Similarly, short interfering RNA (siRNA) signals produced in source or sink tissues move cell-to-cell and long distance via the phloem to apical tissues. Recent advances in identifying these mobile signals regulating flowering or the epigenetic status of targeted tissues can be applicable to crop-breeding programs. In this review, we address the identity of florigen, the mechanism of allocation, and how virus-induced flowering and grafting of transgenes producing siRNA signals affecting meiosis can produce transgene-free progenies useful for agriculture.

  7. Breed differences in calving interval in the humid Mexican tropic.

    Science.gov (United States)

    Murillo Medina, Aída Lorena; Córdova-Izquierdo, Alejandro; Soriano Robles, Ramón; Mendoza Martínez, Germán David; Castillo-Juárez, Héctor

    2009-10-01

    The objective of this study was to evaluate the influence of breed, breed and sex of the calf, farm, calving number (CN), type of calving, and their interactions on CI using records from four different beef breeds performing in the humid tropical environment of Mexico. The influence of these factors on CN was also evaluated. CI and CN varied with farm, breed of the dam, and with breed of the dam by calf breed interaction (PAngus cows, although with an apparent unexpected negative impact on CN.

  8. Analysis of the performance test results of young pure breed boars from the Bydgoszcz breeding region in Poland

    Directory of Open Access Journals (Sweden)

    Grażyna MICHALSKA

    2016-02-01

    Full Text Available The aim of presented paper was analysis of the performance test results of young pure breed boars coming from The Bydgoszcz Breeding Region (located in Poland in Kujawy-Pomorze Province. The research covered the results concerning 4190 young boars of following breeds: Polish Large White, Polish Landrace, Hampshire, Duroc and Pietrain. Young pure breed boars were performance tested in 2009 and 2010 in The Bydgoszcz Breeding Region according to the actual methodology. Among young pure breed boars performance tested in The Bydgoszcz Breeding Region in tested years animals of Hampshire breed had the higher growth rate. The pigs of Pietrain breed had the highest meat content. Regarding to the most important parameter of performance test, i.e. selection index in analyzed years 2009 and 2010 the best results had young boars of Hampshire then Pietrain, Duroc, PLW and PL.

  9. Statistical analysis of the associations between phenolic monoterpenes and molecular markers, AFLPs and SAMPLs in the spice plant Oregano

    Directory of Open Access Journals (Sweden)

    Azizi Ali

    2016-06-01

    Full Text Available Introduction: Molecular markers are the examples of the contribution of genome technology to medicinal plant breeding through marker-assisted selection (MAS for pharmaceutical quality.

  10. Approaches in breeding for high quality protein maize

    Directory of Open Access Journals (Sweden)

    Denić Miloje

    2008-01-01

    Full Text Available Maize is the principal crop and major staple food in the most African and South American countries. The main problem in human nutrition in developing countries, and in livestock feed in developed countries, is insufficient production and poor quality of cereal proteins. In the case of maize, due to the very low content of essential amino acids lysine and tryptophan in grain endosperm, biological value is very low, which is main limiting factor of common maize in human nutrition and feeding of monogastric animals. Quality protein maize (QPM can help in solving of this problem. Maize production also faces serious constraints caused by agro-ecological conditions and poor socio-economic situation. To alleviate the effect of the constraints, selected genotypes with more desirable traits and appropriate field-plot techniques to create multiple-stress conditions, were used. It was found that, in downy mildew nursery distance up to 35 m from spreader plot is providing sufficient down load of spores for plant infection, provided that the testing breeding materials are planted towards to down-stream direction of the dominant wind. Using these breeding approaches large number of early, white and flint synthetics, composites and inbred lines were created with resistance or tolerance to downy mildew (DMR, maize streak virus (SR and drought (DT. Created genotypes exhibited very good kernel modification and yield potential under low and normal inputs. In the case of synthetics and composites, besides tolerance to multiple stress factors, they were competing in yield with local QPM and normal maize checks. In the case of created inbred lines high combining ability was exhibited both in non-conventional and conventional maize hybrids. Trial data revealed that in the most cases the best entries were over-yielding the best checks.

  11. Development and application of marker-assisted reverse breeding using hybrid maize germplasm

    Institute of Scientific and Technical Information of China (English)

    GUAN Yi-Xin; WANG Bao-hua; FENG Yan; LI Ping

    2015-01-01

    Humankind has been through different periods of agricultural improvement aiming at enhancing our food supply and the performance of food crops. In recent years, whole genome sequencing and deep understanding of genetic and epigenetic mechanisms have facilitated new plant breeding approaches to meet the chalenge of growing population, dwindling re-sources, and changing climate. Here we proposed a simple and fast molecular breeding method, marker-assisted reverse breeding (MARB), which wil revert any maize hybrid into inbred lines with any level of required similarity to its original parent lines. Since al the pericarp DNA of a hybrid is from the maternal parent, whereas one half of the embryo DNA is from the maternal parent and the other half from the paternal parent, so we ifrstly extract DNA from seed embryo and pericarp of a selected elite hybrid separately and then we derived the genotypes of the two parents with high-density single nucleotide polymorphism (SNP) chips. The folowing marker-assisted selection was performed based on an Ilumina low-density SNP chip designed with 192 SNPs polymorphic between the two parental genotypes, which were uniformly distributed on 10 maize chromosomes. This method has the advantages of fast speed, ifxed heterotic mode, and quick recovery of beneifcial parental genotypes compared to traditional pedigree breeding using elite hybrids. Meanwhile, MARB has the advantage of not requiring sophisticated transformation and double haploid (DH) technologies over RNA interference (RNAi)-mediated reverse breeding. In addition, MARB can also be used with feed corn harvested from big farms, which is often similar to F2 populations, and the relevant transgenes in the population can be eliminated by marker-assisted selection. As a result, the whole global commercial maize hybrids can be utilized as germplasm for breeding with MARB technology. Starting with an F2 population derived from an elite hybrid, our experiment indicates that with three

  12. Wheat breeding for quality: an historical review

    Science.gov (United States)

    Wheat (Triticum spp. L.) is a leading cereal contributing to the nourishment of humankind. Since its domestication ca. 12 000 years ago, humans have profoundly influenced its evolution. In the more recent past, breeding via cross-hybridization and the selection of progeny with superior end-use quali...

  13. MODELING REGIONAL SYSTEMS OF BREEDING PIGS

    Directory of Open Access Journals (Sweden)

    Svinarev I. Y.

    2015-12-01

    Full Text Available The article contains the experience of the development of the methodology and the computer program for calculation of regional and local systems of pigs hybridization at the example of the Rostov region (Russia. Crossing the GP lines for F1 should be organized in multiplier farm, which may be separate farms and to be part of large commercial farms. For the production of F1 in a multiplier farm, we must breed a purebred specialized paternal and a maternal line, selected on the effect of combining ability. For the successful functioning of the system of hybridization, it is necessary to build a genetic pyramid, including breeding and genetic centers (nucleus farm, multiplier farm, reproducing the baseline. The article gives a detailed calculation of sow population of levels of P, GP, GGP for maternal and paternal breeds of pigs. The program uses user-defined parameters of pigs productivity, of the simulated population, and the parameters characterizing the intensity of selection of young animals. To ensure annual production of 1,822 million pigs in the Rostov region it is necessary to provide the availability of brood stock in the amount of 89 thousand heads, 6 800 heads in the structure of grandparent flocks (GP, 730 heads in the structure of the Grand-Grand-parent stock (GGP, excluding sows second maternal and paternal breeds

  14. Seabird metapopulations: searching for alternative breeding habitats

    NARCIS (Netherlands)

    Schippers, P.; Snep, R.P.H.; Schotman, A.G.M.; Jochem, R.; Stienen, E.W.M.; Slim, P.A.

    2009-01-01

    Today, many seabird species nest in port areas, which are also necessary for human economic activity. In this paper, we evaluate, using a metapopulation model, the possibilities for creating alternative breeding sites for the Common Tern (Sterna hirundo) in the Rhine¿Meuse¿Scheldt estuary. We explor

  15. Breeding for longevity in Italian Chianina cattle

    NARCIS (Netherlands)

    Forabosco, F.

    2005-01-01

    The objective of this thesis was to evaluate genetic aspects of longevity (LPL) in the Chianina beef cattle population in order to define how to include this trait in selection criteria. The Chianina breed has been raised for over twenty-two centuries inItaly

  16. Breed differences in behavioural development in kittens.

    Science.gov (United States)

    Marchei, P; Diverio, S; Falocci, N; Fatjó, J; Ruiz-de-la-Torre, J L; Manteca, X

    2009-03-23

    Differences in behaviour of pure breed cats have been suggested but not wholly investigated. Oriental/Siamese/Abyssinian (OSA) kittens (n=43) were weekly compared with Norwegian Forest (NFO) kittens (n=39) from the 4th to the 10th week of age in a repeated Open Field Test (OFT) paradigm. Heart rate (HR) and rectal temperature (RT) before and after the test, and behavioural responses during the OFT were recorded. Behaviours registered were analysed by focal animal sampling. Significant breed differences were found; cats of the northern zones (NFO) seem to develop earlier thermoregulatory abilities. Precocious opening of eyes, higher locomotion scores and longer time spent standing, observed in OSA kittens may indicate an earlier neurological development. Inter breed differences recorded for exploration and locomotion seem to indicate coping style divergences: in the OFT challenging situation OSA kittens presented higher emotional tachycardia and performed more passively, with a faster decline in exploration and locomotion scores. NFO kittens exerted a more active behaviour as they spent more time exploring the arena and in escape attempts. Notwithstanding OSA and NFO cat selection was mainly aimed to improve divergent morphological traits, some different behavioural and physiological traits seem to have been maintained or co-selected within each breed.

  17. Computerized management support for swine breeding farms.

    NARCIS (Netherlands)

    Huirne, R.B.M.

    1990-01-01

    1. INTRODUCTIONThe investigations described in this thesis have been directed towards computerized management support for swine breeding farms, focused on sow productivity and profitability. The study is composed of three basic parts: (1) basic description and definition of farm man

  18. Evaluation of charge breeding options for EURISOL

    CERN Document Server

    Delahaye, P; Lamy, T; Marie-Jeanne, M; Kester, O; Wenander, F

    2010-01-01

    A comprehensive study of charge breeding techniques for the most ambitious ISOL-facility project, EURISOL, is presented here. It is based on results obtained during the past years at CERN-ISOLDE and LPSC Grenoble with charge breeders of both ECR and EBIS types.

  19. San Diego Zoo:Success in Breeding

    Institute of Scientific and Technical Information of China (English)

    2010-01-01

    Giant pandas have become very popular in U.S.zoos. One in particular, the San Diego Zoo, has been extremely successful at making the pandas feel at home and getting them to breed. In 1999, it became home tothe first surviving panda cub born in the United States.

  20. Marketing potential of advanced breeding clones

    Science.gov (United States)

    The accumulation of reducing sugars during cold storage of potato tubers is a serious and costly problem for producers and processors. The degree to which cultivars accumulate reducing sugars during storage determines their processing and market potential. Cultivars or advanced breeding lines with...