WorldWideScience

Sample records for open channels

  1. All channels open

    NARCIS (Netherlands)

    Frank Huysmans; Jos de Haan

    2010-01-01

    Original title: Alle kanalen staan open. The rapid changes taking place in the media landscape in the Netherlands - characterised by digitisation and convergence of media technologies - raise the question of how the Dutch are dealing with the many new opportunities that have opened up. All channels

  2. Opening Channels of Communication

    Directory of Open Access Journals (Sweden)

    Clarice Moura Costa

    2009-03-01

    Full Text Available Psychosis, as described through a psychodynamic perspective, is conceptualized as an attempt to deny the enveloping reality to avoid contact with the other. Music therapy is a way to break this barrier of non-communication raised by the patients. The music therapy process is configured as a trinomial – action (making music/ relationship (action with the other/communication (musical or verbal voluntary expression of feelings and conflicts, which, although intrinsically connected, is perceived in a sequential process. Aulagnier asserts that psychic activity represents the conjunction of three modes of functioning: the original process, the primary process and the secondary process. The perception of sound passes through three phases, corresponding to each manner of functioning of the psychic system – the pleasure of hearing, the desire to listen (to the other and the imperative of meaning. The music therapy process offers a significant similarity with the theory proposed by Aulagnier. We propose the hypothesis that in music therapy, there is an opportunity to (reexperience very archaic phases in the constitution of the ego, but in a new manner, so helping to open communication channels. This theoretical hypothesis is illustrated by real examples of patients.

  3. Stability of flowing open fluidic channels

    Directory of Open Access Journals (Sweden)

    Jue Nee Tan

    2013-02-01

    Full Text Available Open fluidic systems have a distinct advantage over enclosed channels in that the fluids exposed nature makes for easy external interaction, this finds uses in introduction of samples by adding liquid droplets or from the surrounding gaseous medium. This work investigates flowing open channels and films, which can potentially make use of the open section of the system as an external interface, before bringing the sample into an enclosed channel. Clearly, in this scenario a key factor is the stability of the flowing open fluid. The open channels investigated include a straight open channel defined by a narrow strip of solid surface, the edges of which allow large contact angle hysteresis, and a wider structure allowing for multiple inputs and outputs. A model is developed for fluid flow, and the findings used to describe the process of failure in both cases.

  4. Backstepping feedback control of open channel flow

    OpenAIRE

    Huo, Mandy; Malek, Sami

    2014-01-01

    We derive a feedback control law for the control of the downstream flow in a 1-D open channel by manipulating the water flow at an upstream location. We use backstepping for controller design and Lyapunov techniques for stability analysis. Finally, the controller is verified with simulations.

  5. Evaporative Lithography in Open Microfluidic Channel Networks

    KAUST Repository

    Lone, Saifullah

    2017-02-24

    We demonstrate a direct capillary-driven method based on wetting and evaporation of various suspensions to fabricate regular two-dimensional wires in an open microfluidic channel through continuous deposition of micro- or nanoparticles under evaporative lithography, akin to the coffee-ring effect. The suspension is gently placed in a loading reservoir connected to the main open microchannel groove on a PDMS substrate. Hydrophilic conditions ensure rapid spreading of the suspension from the loading reservoir to fill the entire channel length. Evaporation during the spreading and after the channel is full increases the particle concentration toward the end of the channel. This evaporation-induced convective transport brings particles from the loading reservoir toward the channel end where this flow deposits a continuous multilayered particle structure. The particle deposition front propagates backward over the entire channel length. The final dry deposit of the particles is thereby much thicker than the initial volume fraction of the suspension. The deposition depth is characterized using a 3D imaging profiler, whereas the deposition topography is revealed using a scanning electron microscope. The patterning technology described here is robust and passive and hence operates without an external field. This work may well become a launching pad to construct low-cost and large-scale thin optoelectronic films with variable thicknesses and interspacing distances.

  6. Evaporative Lithography in Open Microfluidic Channel Networks.

    Science.gov (United States)

    Lone, Saifullah; Zhang, Jia Ming; Vakarelski, Ivan U; Li, Er Qiang; Thoroddsen, Sigurdur T

    2017-03-13

    We demonstrate a direct capillary-driven method based on wetting and evaporation of various suspensions to fabricate regular two-dimensional wires in an open microfluidic channel through continuous deposition of micro- or nanoparticles under evaporative lithography, akin to the coffee-ring effect. The suspension is gently placed in a loading reservoir connected to the main open microchannel groove on a PDMS substrate. Hydrophilic conditions ensure rapid spreading of the suspension from the loading reservoir to fill the entire channel length. Evaporation during the spreading and after the channel is full increases the particle concentration toward the end of the channel. This evaporation-induced convective transport brings particles from the loading reservoir toward the channel end where this flow deposits a continuous multilayered particle structure. The particle deposition front propagates backward over the entire channel length. The final dry deposit of the particles is thereby much thicker than the initial volume fraction of the suspension. The deposition depth is characterized using a 3D imaging profiler, whereas the deposition topography is revealed using a scanning electron microscope. The patterning technology described here is robust and passive and hence operates without an external field. This work may well become a launching pad to construct low-cost and large-scale thin optoelectronic films with variable thicknesses and interspacing distances.

  7. Mathematical Modeling on Open Limestone Channel

    CERN Document Server

    Bandstra, Joel; Wu, Naiyi

    2014-01-01

    Acid mine drainage (AMD) is the outflow of acidic water from metal mines or coal mines. When exposed to air and water, metal sulfides from the deposits of the mines are oxidized and produce acid, metal ions and sulfate, which lower the pH value of the water. An open limestone channel (OLC) is a passive and low cost way to neutralize AMD. The dissolution of calcium into the water increases the pH value of the solution. A differential equation model is numerically solved to predict the variation of concentration of each species in the OLC solution. The diffusion of Calcium due to iron precipitates is modeled by a linear equation. The results give the variation of pH value and the concentration of Calcium.

  8. VELOCITY PROFILES OF TURBULENT OPEN CHANNEL FLOWS

    Institute of Scientific and Technical Information of China (English)

    WANG Dianchang; WANG Xingkui; YU Mingzhong; LI Danxun

    2001-01-01

    The log-law and the wake law of velocity profile for open channel flows are discussed and compared in this paper. Experimental data from eight sources are used to verify the velocity distribution models.The effect of bed level on the velocity profile is analyzed. A formula to calculate the maximum velocity is proposed. In the region of y <δm , the velocity profile approximately follows the log-law. For the region of y >δm , the effect of the aspect ratio is considered. A new velocity profile model on the basis of log-law that can unify all of the hydraulic bed roughness is presented.

  9. Identification of resonance waves in open water channels

    Science.gov (United States)

    This article presents a procedure to determine the characteristics of open water channels required for controller and filter design, with special focus on the resonance waves. Also, a new simplified model structure for open water channels is proposed. The procedure applies System Identification tool...

  10. Frequency width of open channels in multiple scattering media

    NARCIS (Netherlands)

    Bosch, J.; Goorden, S.A.; Mosk, Allard

    2016-01-01

    We report optical measurements of the spectral width of open transmission channels in a three-dimensional diffusive medium. The light transmission through a sample is enhanced by efficiently coupling to open transmission channels using repeated digital optical phase conjugation. The spectral

  11. NONUNIFORM OPEN CHANNEL FLOW WITH UPWARD SEEPAGE THROUGH LOOSE BEDS

    Institute of Scientific and Technical Information of China (English)

    Subhasish DEY

    2003-01-01

    The Reynolds stress and bed shear stress are important parameters in fluvial hydraulics. Steadynonuniform flow in open channels with streamwise sloping beds having upward seepage through loose beds is theoretically analyzed to estimate the Reynolds stress and bed shear stress. Equations of the Reynolds stress and bed shear stress are developed, assuming a modified logarithmic velocity distribution law due to upward seepage, and using the Reynolds and continuity equations of twodimensional flow in open channels.

  12. Computation of gradually varied flow in compound open channel networks

    Indian Academy of Sciences (India)

    H Prashanth Reddy; M Hanif Chaudhry; Jasim Imran

    2014-12-01

    Although, natural channels are rarely rectangular or trapezoidal in cross section, these cross sections are assumed for the computation of steady, gradually varied flow in open channel networks. The accuracy of the computed results, therefore, becomes questionable due to differences in the hydraulic and geometric characteristics of the main channel and floodplains. To overcome these limitations, an algorithm is presented in this paper to compute steady, gradually varied flow in an open-channel network with compound cross sections. As compared to the presently available methods, the methodology is more general and suitable for application to compound and trapezoidal channel cross sections in series channels, tree-type or looped networks. In this method, the energy and continuity equations are solved for steady, gradually varied flow by the Newton–Raphson method and the proposed methodology is applied to tree-type and looped-channel networks. An algorithm is presented to determine multiple critical depths in a compound channel. Modifications in channel geometry are presented to avoid the occurrence of multiple critical depths. The occurrence of only one critical depth in a compound cross section with modified geometry is demonstrated for a tree-type channel network.

  13. Numerical Investigation of Developing Velocity Distributions in Open Channel Flows

    Directory of Open Access Journals (Sweden)

    Usman Ghani

    2014-04-01

    Full Text Available The velocity profiles in open channel flows start developing after entering into the channel for quite some length. All types of laboratory experiments for open channel flows are carried out in the fully developed flow regions which exist at some length downstream the inlet. In this research work an attempt has been made to investigate the impact of roughness and slope of the channel bed on the length required for establishment of fully developed flow in an open channel. A range of different roughness values along with various slopes were considered for this purpose. It was observed that an increase in roughness results in reduction of development length; and development length reduces drastically when roughness reaches to the range normally encountered in open channel flows with emergent vegetation or natural river flows. However, it was observed that the change of slope did not have any noticeable effect on development length. This work suggests that CFD (Computational Fluid Dynamics technique can be used for getting a reliable development length before performing an experimental work

  14. Localization in chaotic systems with a single-channel opening.

    Science.gov (United States)

    Lippolis, Domenico; Ryu, Jung-Wan; Kim, Sang Wook

    2015-07-01

    We introduce a single-channel opening in a random Hamiltonian and a quantized chaotic map: localization on the opening occurs as a sensible deviation of the wave-function statistics from the predictions of random matrix theory, even in the semiclassical limit. Increasing the coupling to the open channel in the quantum model, we observe a similar picture to resonance trapping, made of a few fast-decaying states, whose left (right) eigenfunctions are entirely localized on the (preimage of the) opening, and plentiful long-lived states, whose probability density is instead suppressed at the opening. For the latter, we derive and test a linear relation between the wave-function intensities and the decay rates, similar to the Breit-Wigner law. We then analyze the statistics of the eigenfunctions of the corresponding (discretized) classical propagator, finding a similar behavior to the quantum system only in the weak-coupling regime.

  15. Frequency width of open channels in multiple scattering media.

    Science.gov (United States)

    Bosch, Jeroen; Goorden, Sebastianus A; Mosk, Allard P

    2016-11-14

    We report optical measurements of the spectral width of open transmission channels in a three-dimensional diffusive medium. The light transmission through a sample is enhanced by efficiently coupling to open transmission channels using repeated digital optical phase conjugation. The spectral properties are investigated by enhancing the transmission, fixing the incident wavefront and scanning the wavelength of the laser. We measure the transmitted field to extract the field correlation function and the enhancement of the total transmission. We find that optimizing the total transmission leads to a significant increase in the frequency width of the field correlation function. Additionally we find that the enhanced transmission persists over an even larger frequency bandwidth. This result shows open channels in the diffusive regime are spectrally much wider than previous measurements in the localized regime suggest.

  16. Pathlengths of open channels in multiple scattering media

    CERN Document Server

    Bosch, Jeroen; Mosk, Allard P

    2016-01-01

    We report optical measurements of the spectral width of open transmission channels in a three-dimensional diffusive medium. The light transmission through a sample is enhanced by efficiently coupling to open transmission channels using repeated digital optical phase conjugation. The spectral properties are investigated by enhancing the transmission, fixing the incident wavefront and scanning the wavelength of the laser. We measure the transmitted field to extract the field correlation function and the enhancement of the total transmission. We find that optimizing the total transmission leads to a significant increase in the frequency width of the field correlation function. Additionally we find that the enhanced transmission persists over an even larger frequency bandwidth. This result shows open channels in the diffusive regime are spectrally much wider than previous measurements in the localized regime suggest.

  17. Cooperative transition between open and closed conformations in potassium channels.

    Directory of Open Access Journals (Sweden)

    Turkan Haliloglu

    Full Text Available Potassium (K+ ion channels switch between open and closed conformations. The nature of this important transition was revealed by comparing the X-ray crystal structures of the MthK channel from Methanobacterium thermoautotrophicum, obtained in its open conformation, and the KcsA channel from Streptomyces lividans, obtained in its closed conformation. We analyzed the dynamic characteristics and energetics of these homotetrameric structures in order to study the role of the intersubunit cooperativity in this transition. For this, elastic models and in silico alanine-scanning mutagenesis were used, respectively. Reassuringly, the calculations manifested motion from the open (closed towards the closed (open conformation. The calculations also revealed a network of dynamically and energetically coupled residues. Interestingly, the network suggests coupling between the selectivity filter and the gate, which are located at the two ends of the channel pore. Coupling between these two regions was not observed in calculations that were conducted with the monomer, which emphasizes the importance of the intersubunit interactions within the tetrameric structure for the cooperative gating behavior of the channel.

  18. The complete structure of an activated open sodium channel

    Science.gov (United States)

    Sula, Altin; Booker, Jennifer; Ng, Leo C. T.; Naylor, Claire E.; DeCaen, Paul G.; Wallace, B. A.

    2017-01-01

    Voltage-gated sodium channels (Navs) play essential roles in excitable tissues, with their activation and opening resulting in the initial phase of the action potential. The cycling of Navs through open, closed and inactivated states, and their closely choreographed relationships with the activities of other ion channels lead to exquisite control of intracellular ion concentrations in both prokaryotes and eukaryotes. Here we present the 2.45 Å resolution crystal structure of the complete NavMs prokaryotic sodium channel in a fully open conformation. A canonical activated conformation of the voltage sensor S4 helix, an open selectivity filter leading to an open activation gate at the intracellular membrane surface and the intracellular C-terminal domain are visible in the structure. It includes a heretofore unseen interaction motif between W77 of S3, the S4–S5 interdomain linker, and the C-terminus, which is associated with regulation of opening and closing of the intracellular gate. PMID:28205548

  19. Effect Of Flow Resistance In Open Rectangular Channel

    Directory of Open Access Journals (Sweden)

    Ahmad Noor Aliza

    2017-01-01

    Full Text Available The determination of flow resistance for open channels remains a challenge in practices. In this research, an experimental study was carried out to investigate the hydraulic roughness characteristics in an open channel. The experimental flume (10 m length, 0.30 m width and 0.46 height was carried out with two conditions ; contain gravel bed and without gravel bed (as controller. Blocks of concrete foam were fabricated and laid on the bed surface for providing uniformly roughened along the open channel. A velocity flow meter was used to quantify the average velocity, and other parameters such as cross-section, hydraulic radius, wetted perimeter, and channel slopes were also calculated. Finally, the flow resistance, n obtained using the flume with gravel bed surface is higher than the flume without gravel bed surface. The flow conditions were declared as subcritical as the Froude number is less than 1 for both conditions in the flume. As a conclusion, it was identified that the hydraulic roughness n, was influenced by the type bed roughness, flow rate and channel slope.

  20. Secondary flow in sharp open-channel bends

    NARCIS (Netherlands)

    Blanckaert, K.; De Vriend, H.J.

    2004-01-01

    Secondary currents are a characteristic feature of flow in open-channel bends. Besides the classical helical motion (centre-region cell), a weaker and smaller counter-rotating circulation cell (outer-bank cell) is often observed near the outer bank, which is believed to play an important role in ban

  1. Pharmacodynamics of potassium channel openers in cultured neuronal networks.

    Science.gov (United States)

    Wu, Calvin; V Gopal, Kamakshi; Lukas, Thomas J; Gross, Guenter W; Moore, Ernest J

    2014-06-01

    A novel class of drugs - potassium (K(+)) channel openers or activators - has recently been shown to cause anticonvulsive and neuroprotective effects by activating hyperpolarizing K(+) currents, and therefore, may show efficacy for treating tinnitus. This study presents measurements of the modulatory effects of four K(+) channel openers on the spontaneous activity and action potential waveforms of neuronal networks. The networks were derived from mouse embryonic auditory cortices and grown on microelectrode arrays. Pentylenetetrazol was used to create hyperactivity states in the neuronal networks as a first approximation for mimicking tinnitus or tinnitus-like activity. We then compared the pharmacodynamics of the four channel activators, retigabine and flupirtine (voltage-gated K(+) channel KV7 activators), NS1619 and isopimaric acid ("big potassium" BK channel activators). The EC50 of retigabine, flupirtine, NS1619, and isopimaric acid were 8.0, 4.0, 5.8, and 7.8µM, respectively. The reduction of hyperactivity compared to the reference activity was significant. The present results highlight the notion of re-purposing the K(+) channel activators for reducing hyperactivity of spontaneously active auditory networks, serving as a platform for these drugs to show efficacy toward target identification, prevention, as well as treatment of tinnitus.

  2. LARGE EDDY SIMULATION OF PULSATING TURBULENT OPEN CHANNEL FLOW

    Institute of Scientific and Technical Information of China (English)

    ZOU Li-yong; LIU Nan-sheng; LU Xi-yun

    2004-01-01

    Pulsating turbulent open channel flow has been investigated by the use of Large Eddy Simulation (LES) technique coupled with dynamic Sub-Grid-Scale (SGS) model for turbulent SGS stress to closure the governing equations. Three-dimensional filtered Navier-Stokes equations are numerically solved by a fractional-step method. The objective of this study is to deal with the behavior of the pulsating turbulent open channel flow and to examine the reliability of the LES approach for predicting the pulsating turbulent flow. In this study, the Reynolds number (Reτ ) is chosen as 180 based on the friction velocity and the channel depth. The frequency of the driving pressure gradient for the pulsating turbulent flow ranges low, medium and high value. Statistical turbulence quantities as well as the flow structures are analyzed.

  3. Microfluidic mixing in a Y-junction open channel

    Directory of Open Access Journals (Sweden)

    Jue Nee Tan

    2012-09-01

    Full Text Available In the laminar regimes typical of microfluidic systems’, mixing is governed by molecular diffusion; however this process is slow in nature. Consequently, passive or active methods are usually sought for effective mixing. In this work, open fluidic channels will be investigated; these channels are bounded on all but one face by an air/fluid interface. Firstly, it will be shown that flow in open channels can merge at a Y-junction in a stable manner; hence two fluids can be brought into contact with each other. Secondly, the mixing of these two fluids will be studied. At high flow rates (>300 μl/min mixing occurs at the junction without need for additional intervention, this mixing is far swifter than can be expected from molecular diffusion. At lower flow rates, intervention is required. A major motivation for open fluidic channels is the ability to interact with the surrounding air environment; this feature is used to effect the desired mixing. It is shown that by blowing an air jet across the junction, shear stresses at the air/fluid interface causes a flow profile within the fluid inductive to rapid mixing of the fluids.

  4. Uncoupling charge movement from channel opening in voltage-gated potassium channels by ruthenium complexes.

    Science.gov (United States)

    Jara-Oseguera, Andrés; Ishida, Itzel G; Rangel-Yescas, Gisela E; Espinosa-Jalapa, Noel; Pérez-Guzmán, José A; Elías-Viñas, David; Le Lagadec, Ronan; Rosenbaum, Tamara; Islas, León D

    2011-05-06

    The Kv2.1 channel generates a delayed-rectifier current in neurons and is responsible for modulation of neuronal spike frequency and membrane repolarization in pancreatic β-cells and cardiomyocytes. As with other tetrameric voltage-activated K(+)-channels, it has been proposed that each of the four Kv2.1 voltage-sensing domains activates independently upon depolarization, leading to a final concerted transition that causes channel opening. The mechanism by which voltage-sensor activation is coupled to the gating of the pore is still not understood. Here we show that the carbon-monoxide releasing molecule 2 (CORM-2) is an allosteric inhibitor of the Kv2.1 channel and that its inhibitory properties derive from the CORM-2 ability to largely reduce the voltage dependence of the opening transition, uncoupling voltage-sensor activation from the concerted opening transition. We additionally demonstrate that CORM-2 modulates Shaker K(+)-channels in a similar manner. Our data suggest that the mechanism of inhibition by CORM-2 may be common to voltage-activated channels and that this compound should be a useful tool for understanding the mechanisms of electromechanical coupling.

  5. Alpha Channeling in Open-System Magnetic Devices

    Energy Technology Data Exchange (ETDEWEB)

    Fisch, Nathaniel [Princeton Univ., NJ (United States)

    2016-06-19

    The Grant DE-SC0000736, Alpha Channeling in Open-System Magnetic Devices, is a continuation of the Grant DE-FG02-06ER54851, Alpha Channeling in Mirror Machines. In publications funded by DE-SC0000736, the grant DE-FG02-06ER54851 was actually credited. The key results obtained under Grant DE-SC0000736, Alpha Channeling in Open-System Magnetic Devices, appear in a series of publications. The earlier effort under DE-FG02- 06ER54851 was the subject of a previous Final Report. The theme of this later effort has been unusual confinement effects, or de-confinement effects, in open-field magnetic confinement devices. First, the possibilities in losing axisymmetry were explored. Then a number of issues in rotating plasma were addressed. Most importantly, a spinoff application to plasma separations was recognized, which also resulted in a provisional patent application. (That provisional patent application, however, was not pursued further.) Alpha channeling entails injecting waves into magnetically confined plasma to release energy from one particular ion while ejecting that ion. The ejection of the ion is actually a concomitant effect in releasing energy from the ion to the wave. In rotating plasma, there is the opportunity to store the energy in a radial electric field rather than in waves. In other words, the ejected alpha particle loses its energy to the radial potential, which in turn produces plasma rotation. This is a very useful effect, since producing radial electric fields by other means are technologically more difficult. In fact, one can heat ions, and then eject them, to produce the desired radial field. In each case, there is a separation effect of different ions, which generalizes the original alpha-channeling concept of separating alpha ash from hydrogen. In a further generalization of the separation concept, a double-well filter represents a new way to produce high-throughput separations of ions, potentially useful for nuclear waste remediation.

  6. The mechanical energy equation for total flow in open channels

    Institute of Scientific and Technical Information of China (English)

    刘士和; 范敏; 薛娇

    2014-01-01

    The mechanical energy equation is a fundamental equation of a 1-D mathematical model in Hydraulics and Engineering Fluid Mechanics. This equation for the total flow used to be deduced by extending the Bernoulli’s equation for the ideal fluid in the streamline to a stream tube, and then revised by considering the viscous effect and integrated on the cross section. This derivation is not rigorous and the effect of turbulence is not considered. In this paper, the energy equation for the total flow is derived by using the Navier-Stokes equations in Fluid Mechanics, the results are as follows:(1) A new energy equation for steady channel flows of in-compressible homogeneous liquid is obtained, which includes the variation of the turbulent kinetic energy along the channel, the for-mula for the mechanical energy loss of the total flow can be determined directly in the deduction process. (2) The theoretical solution of the velocity field for laminar flows in a rectangular open channel is obtained and the mechanical energy loss in the energy equa-tion is calculated. The variations of the coefficient of the mechanical energy loss against the Reynolds number and the width-depth ratio are obtained. (3) The turbulent flow in a rectangular open channel is simulated using 3-D Reynolds averaged equations closed by the Reynolds stress model (RSM), and the variations of the coefficient of the mechanical energy loss against the Reynolds number and the width-depth ratio are discussed.

  7. TRANSVERSE MIXING IN A TRAPEZOIDAL COMPOUND OPEN CHANNEL

    Institute of Scientific and Technical Information of China (English)

    ZENG Yu-hong; HUAI Wen-xin; GUYMER I

    2008-01-01

    Transverse mixing characteristics of solute in the open channel flow can provide useful information for river environmental management. The lateral mixing coefficient is a crucial parameter for reproducing the transverse mixing either by numerical simulation or by analytical prediction. Since the solute mixing can be greatly affected by the lateral variations in water depth, mixing coefficient should be determined in each sub-section (i.e., the main channel, side slope and flood plain) separately. In this article, the transverse mixing in a symmetric trapezoidal compound channel was studied based on laboratory measurement of longitudinal and transverse velocity components and lateral distribution of solute concentration. The lateral mixing coefficient was estimated by adopting different Schmidt numbers in different sub-sections divided according to the developing trend of the eddy viscosity, and finally a piecewise linear profile of mixing coefficient was adopted to analytically predict the transverse solute concentration. The comparison between the analytically predicted data and the measuring solute concentration proved that this is an effective way to estimate the lateral mixing in the open channel flow with lateral variations in water depth.

  8. Opening of K+ channels by capacitive stimulation from silicon chip

    Science.gov (United States)

    Ulbrich, M. H.; Fromherz, P.

    2005-10-01

    The development of stable neuroelectronic systems requires a stimulation of nerve cells from semiconductor devices without electrochemical effects at the electrolyte/solid interface and without damage of the cell membrane. The interaction must rely on a reversible opening of voltage-gated ion channels by capacitive coupling. In a proof-of-principle experiment, we demonstrate that Kv1.3 potassium channels expressed in HEK293 cells can be opened from an electrolyte/oxide/silicon (EOS) capacitor. A sufficient strength of electrical coupling is achieved by insulating silicon with a thin film of TiO2 to achieve a high capacitance and by removing NaCl from the electrolyte to enhance the resistance of the cell-chip contact. When a decaying voltage ramp is applied to the EOS capacitor, an outward current through the attached cell membrane is observed that is specific for Kv1.3 channels. An open probability up to fifty percent is estimated by comparison with a numerical simulation of the cell-chip contact.

  9. Basic hydraulic principles of open-channel flow

    Science.gov (United States)

    Jobson, Harvey E.; Froehlich, David C.

    1988-01-01

    The three basic principles of open-channel-flow analysis--the conservation of mass, energy, and momentum--are derived, explained, and applied to solve problems of open-channel flow. These principles are introduced at a level that can be comprehended by a person with an understanding of the principles of physics and mechanics equivalent to that presented in the first college level course of the subject. The reader is assumed to have a working knowledge of algebra and plane geometry as well as some knowledge of calculus. Once the principles have been derived, a number of example applications are presented that illustrate the computation of flow through culverts and bridges, and over structures, such as dams and weirs. Because resistance to flow is a major obstacle to the successful application of the energy principle to open-channel flow, procedures are outlined for the rational selection of flow resistance coefficients. The principle of specific energy is shown to be useful in the prediction of water-surface profiles both in the qualitative and quantitative sense. (USGS)

  10. K sup + channel openers activate brain sulfonylurea-sensitive K sup + channels and block neurosecretion

    Energy Technology Data Exchange (ETDEWEB)

    Schmid-Antomarchi, H.; Amoroso, S.; Fosset, M.; Lazdunski, M. (Centre National de la Recherche Scientifique, Valbonne (France))

    1990-05-01

    Vascular K{sup +} channel openers such as cromakalim, nicorandil, and pinacidil potently stimulate {sup 86}Rb{sup +} efflux from slices of substantia nigra. This {sup 86}Rb{sup +} efflux is blocked by antidiabetic sulfonylureas, which are known to be potent and specific blockers of ATP-regulated K{sup +} channels in pancreatic beta cells, cardiac cells, and smooth muscle cells. K{sub 0.5}, the half-maximal effect of the enantiomer ({minus})-cromakalim, is as low as 10 nM, whereas K{sub 0.5} for nicorandil is 100 nM. These two compounds appear to have a much higher affinity for nerve cells than for smooth muscle cells. Openers of sulfonylurea-sensitive K{sup +} channels lead to inhibition of {gamma}-aminobutyric acid release. There is an excellent relationship between potency to activate {sup 86}Rb{sup +} efflux and potency to inhibit neurotransmitter release.

  11. CHARACTERISTICS OF FLOW RESISTANCE IN OPEN CHANNELS WITH NON-SUBMERGED RIGID VEGETATION

    Institute of Scientific and Technical Information of China (English)

    WU Fu-sheng

    2008-01-01

    The flow resistance factors of non-submerged rigid vegetation in open channels were analyzed. The formulas of drag coefficient CD and equivalent Manning's roughness coefficient nd were derived by analyzing the force of the flow of non-submerged rigid vegetation in open channel. The flow characteristics and mechanism of non-submerged rigid vegetation in open channel were studied through flume experiments.

  12. LONGITUDINAL DISPERSION IN SEDIMENT-LADEN OPEN CHANNEL FLOWS

    Institute of Scientific and Technical Information of China (English)

    Z.AHMAD; U.C.KOTHYARI; K.G.RANGA RAJU

    2004-01-01

    Laboratory experiments on longitudinal dispersion in clear-water and sediment-laden open channel flows are reported. Data from these experiments and those available from previous studies indicate that the suspended sediment present in the flow affects the longitudinal dispersion process. The observed velocity distributions over the depth of sediment-laden flows indicate that the velocity deviates from the mean velocity more in sediment-laden flows than in clear-water flows. The velocity distributions over the cross section and secondary flow in the channel are also expected to be altered due to the presence of suspended sediments in the flow. For these reasons, more dispersion is found in sediment-laden flows than in corresponding clear-water flows. A predictor for the dispersion coefficient in sediment-laden flows is proposed.

  13. A-jump in horizontal inverted semicircular open channels

    Directory of Open Access Journals (Sweden)

    I.M.H. Rashwan

    2013-12-01

    Full Text Available The hydraulic jump is a transitional state from supercritical to subcritical flow. The phenomenon of the hydraulic jump has been widely studied because of its frequent occurrence in nature and because of its uses in many practical applications. In the present study the momentum principle is used to derive an equation expressed the hydraulic jump (A-jump occurred in a short horizontal reach of an inverted semicircular open channel. The derived equation indicates that the initial water depth and the tail water depth (conjugate depths are functions of the critical water depth. Various elements of the hydraulic jump are expressed in dimensionless case. The procedure of dimensionless ratios described in the present paper can be used to determine various elements of A-jump in an inverted semicircular channel when either the discharge and the relative initial depth (or tail water depth is known or the discharge and the relative dissipated energy are known.

  14. Solute dispersion in open channel flow with bed absorption

    Science.gov (United States)

    Wang, Ping; Chen, G. Q.

    2016-12-01

    Reactive solute dispersion is of essential significance in various ecological and environmental applications. It is only qualitatively known that boundary absorption depletes pollutant around the boundary and reduces the concentration nearby. All the existing studies on this topic have been focused on the longitudinally distributed mean concentration, far from enough to fully characterize the transport process with tremendous cross-sectional concentration nonuniformity. This work presents an analytical study of the evolution of two-dimensional concentration distribution for solute dispersion in a laminar open channel flow with bed absorption. The fourth order Aris-Gill expansion proposed in our previous study (Wang and Chen, 2016b) is further extended for the case with bed absorption to cover the transitional effects of skewness and kurtosis. Results reveal the extremely nonuniform cross-sectional concentration distribution, and demonstrate that concentration at the bed instead of the mean should be used for reliable quantification of the absorption flux. The accurate two-dimensional concentration distribution presented in this study brings important environmental implications such as risk assessment associated with peak concentration position and duration of toxic pollutant cloud in open channel waters.

  15. Two dimensional velocity distribution in open channels using Renyi entropy

    Science.gov (United States)

    Kumbhakar, Manotosh; Ghoshal, Koeli

    2016-05-01

    In this study, the entropy concept is employed for describing the two-dimensional velocity distribution in an open channel. Using the principle of maximum entropy, the velocity distribution is derived by maximizing the Renyi entropy by assuming dimensionless velocity as a random variable. The derived velocity equation is capable of describing the variation of velocity along both the vertical and transverse directions with maximum velocity occurring on or below the water surface. The developed model of velocity distribution is tested with field and laboratory observations and is also compared with existing entropy-based velocity distributions. The present model has shown good agreement with the observed data and its prediction accuracy is comparable with the other existing models.

  16. Wall and Bed Shear Force in Rectangular Open Channels

    CERN Document Server

    Tavakkol, Sasan

    2016-01-01

    A method is introduced to determine the percentage of the total shear force acting on the walls and bed in rectangular open channels. The proposed method takes both the velocity gradients and secondary currents into account. In the current method the channel cross section is divided into subsections using the bisectors along which there are no secondary flow effects, and isovels orthogonal trajectories along which there is no shear stress. Based on these subsections and assuming the equilibrium between the shear force and gravitational force, the share of the bed and wall from the mean shear force of the flow are calculated. Calculated wall and bed shear forces are in very good agreement with experimental data with an average relative error less than 5%. It is also shown that neglecting the effect of secondary currents and only assuming zero-shear division lines does not yield to acceptable results. The method also provides a possible range for wall and bed shear forces which nicely covers the experimental da...

  17. Open-channel blockers of the NMDA receptor complex.

    Science.gov (United States)

    Albensi, Benedict C; Ilkanich, Erin

    2004-11-01

    A variety of compounds have been shown to limit or prevent excitotoxicity by blocking N-methyl-D-aspartate (NMDA) receptor-mediated neurotransmission. However, many first-generation NMDA antagonists did not live up to clinical expectations in trials of acute brain injury because of the manifestation of multiple side effects. In spite of this, development of NMDA antagonists continues, where some of the newer agents block excitotoxicity through alternative mechanisms. For example, blockers selective to the NR2B subunit or agents that block metabotropic glutamate receptors or alpha-amino-3-hydroxy-5-methyl-4-isoxazolepropionic acid receptors are currently under investigation. Several years ago, the arylalkylamine spider toxins were demonstrated to function as open-channel blockers similar to memantine, which was very recently approved by the U.S. FDA for use in patients with Alzheimer's dementia. With this said, programs focusing on NMDA antagonism via alternative mechanisms may still hold promise for treating acute injury and even chronic forms of dementia.

  18. CURVED OPEN CHANNEL FLOW ON VEGETATION ROUGHENED INNER BANK

    Institute of Scientific and Technical Information of China (English)

    HUAI Wen-xin; LI Cheng-guang; ZENG Yu-hong; QIAN Zhong-dong; YANG Zhong-hua

    2012-01-01

    A RNG k-ε numerical model together with a laboratory measurement with Micro ADV are adopted to investigate the flow through a 180° curved open channel (a 4 m straight inflow section,a 180° curved section,and a 4m straight outflow section)partially covered with rigid vegetations on its inner bank.Under the combined action of the vegetation and the bend flow,the flow structure is complex.The stream-wise velocities in the vegetation region are much smaller than those in the non-vegetation region due to the retardation caused by the vegetation.For the same reason,no clear circulation is found in the vegetated region,while in the non-vegetation region,a slight counter-rotating circulation is found near the outer bank at both 90° and downstream curved cross-sections.A comparison between the numerical prediction and the laboratory measurement shows that the RNG k- model can well predict the flow structure of the bend flow with vegetation.Furthermore,the shear stress is analyzed based on the numerical prediction.The much smaller value in the inner vegetated region indicates that the vegetation can effectively protect the fiver bank from scouting and erosion,in other words,the sediment is more likely to be deposited in the vegetation region.

  19. Air entrainment in open channel flows. Application to spillways

    Energy Technology Data Exchange (ETDEWEB)

    Chanson, H. (Queensland Univ., St. Lucia (Australia))

    1992-01-01

    In open channel flows an important design parameter is the amount of entrained air. The presence of air in high velocity flows or steep chutes increases the bulk of the flow and this is a design parameter that determines the height of chute sidewalls. Furthermore the presence of air within the boundary layer reduces the shear stress between flow layers and hence the shear forces. The resulting increase of fluid motion must be taken in account when designing ski jump and stilling basin downstream of a spillway. Besides the presence of air within high-velocity flows may prevent or reduce cavitation damage. Estimation of the quantity of air entrained along the spillway is required by the design engineer when sitting aerators to artificially introduce more air, or determining whether aerators are required. Recently air entrainment on chutes also been recognized for its contribution to air-water transfer of atmospheric gases such as oxygen and nitrogen. This article describes a general method to compute the flow characteristics of self-aerated flows. Firstly the uniform flow conditions are presented and comparisons will be made between model and prototype results. Then the basic equations for gradually varied aerated flows will be developed, and these results are discussed and compared with experimental data. 28 refs., 8 figs., 3 tabs.

  20. Modeling algae growth in an open-channel raceway.

    Energy Technology Data Exchange (ETDEWEB)

    James, Scott Carlton

    2010-09-01

    Cost-effective implementation of microalgae as a solar-to-chemical energy conversion platform requires extensive system optimization; computer modeling can bring this to bear. This work uses modified versions of the U.S. Environmental Protection Agency's (EPA's) Environmental Fluid Dynamics Code (EFDC) in conjunction with the U.S. Army Corp of Engineers water-quality code (CE-QUAL) to simulate hydrodynamics coupled to growth kinetics of algae (Phaeodactylum tricornutum) in open-channel raceways. The model allows the flexibility to manipulate a host of variables associated with raceway-design, algal-growth, water-quality, hydrodynamic, and atmospheric conditions. The model provides realistic results wherein growth rates follow the diurnal fluctuation of solar irradiation and temperature. The greatest benefit that numerical simulation of the flow system offers is the ability to design the raceway before construction, saving considerable cost and time. Moreover, experiment operators can evaluate the impacts of various changes to system conditions (e.g., depth, temperature, flow speeds) without risking the algal biomass under study.

  1. Modeling algae growth in an open-channel raceway.

    Science.gov (United States)

    James, Scott C; Boriah, Varun

    2010-07-01

    Cost-effective implementation of microalgae as a solar-to-chemical energy conversion platform requires extensive system optimization; computer modeling can bring this to bear. This work uses modified versions of the U.S. Environmental Protection Agency's (EPA's) Environmental Fluid Dynamics Code (EFDC) in conjunction with the U.S. Army Corp of Engineers' water-quality code (CE-QUAL) to simulate hydrodynamics coupled to growth kinetics of algae (Phaeodactylum tricornutum) in open-channel raceways. The model allows the flexibility to manipulate a host of variables associated with raceway-design, algal-growth, water-quality, hydrodynamic, and atmospheric conditions. The model provides realistic results wherein growth rates follow the diurnal fluctuation of solar irradiation and temperature. The greatest benefit that numerical simulation of the flow system offers is the ability to design the raceway before construction, saving considerable cost and time. Moreover, experiment operators can evaluate the impacts of various changes to system conditions (e.g., depth, temperature, flow speeds) without risking the algal biomass under study.

  2. Langevin approach for stochastic Hodgkin-Huxley dynamics with discretization of channel open fraction

    Science.gov (United States)

    Huang, Yandong; Rüdiger, Sten; Shuai, Jianwei

    2013-12-01

    The random opening and closing of ion channels establishes channel noise, which can be approximated and included into stochastic differential equations (Langevin approach). The Langevin approach is often incorporated to model stochastic ion channel dynamics for systems with a large number of channels. Here, we introduce a discretization procedure of a channel-based Langevin approach to simulate the stochastic channel dynamics with small and intermediate numbers of channels. We show that our Langevin approach with discrete channel open fractions can give a good approximation of the original Markov dynamics even for only 10 K channels. We suggest that the better approximation by the discretized Langevin approach originates from the improved representation of events that trigger action potentials.

  3. Langevin approach for stochastic Hodgkin–Huxley dynamics with discretization of channel open fraction

    Energy Technology Data Exchange (ETDEWEB)

    Huang, Yandong [Department of Physics and Institute of Theoretical Physics and Astrophysics, Xiamen University, Xiamen 361005 (China); Rüdiger, Sten [Institute of Physics, Humboldt-Universität zu Berlin (Germany); Shuai, Jianwei, E-mail: jianweishuai@xmu.edu.cn [Department of Physics and Institute of Theoretical Physics and Astrophysics, Xiamen University, Xiamen 361005 (China)

    2013-12-13

    The random opening and closing of ion channels establishes channel noise, which can be approximated and included into stochastic differential equations (Langevin approach). The Langevin approach is often incorporated to model stochastic ion channel dynamics for systems with a large number of channels. Here, we introduce a discretization procedure of a channel-based Langevin approach to simulate the stochastic channel dynamics with small and intermediate numbers of channels. We show that our Langevin approach with discrete channel open fractions can give a good approximation of the original Markov dynamics even for only 10 K{sup +} channels. We suggest that the better approximation by the discretized Langevin approach originates from the improved representation of events that trigger action potentials.

  4. Phentolamine precludes inhibitory effect of the K+ channel opener pinacidil on insulin release

    NARCIS (Netherlands)

    Links, TP; Smitz, AJ; vanHaeften, TW

    1996-01-01

    The K+ channel opener pinacidil, in clinical use as an antihypertensive agent, acts by opening ATP-sensitive K+ channels in striated and smooth muscle cells. In vitro and in vivo studies have suggested that it also diminishes insulin secretion. Insulin secretion can be influenced directly - by actin

  5. Minoxidil opens mitochondrial KATP channels and confers cardioprotection

    Science.gov (United States)

    Sato, Toshiaki; Li, Yulong; Saito, Tomoaki; Nakaya, Haruaki

    2003-01-01

    ATP-sensitive potassium channel in the mitochondrial inner membrane (mitoKATP channel) rather than in the sarcolemma (sarcKATP channel) appears to play an important role in cardioprotection. We examined the effect of minoxidil, a potent antihypertensive agent and hair growth stimulator, on sarcKATP and mitoKATP channels in guinea-pig ventricular myocytes. Minoxidil activated a glybenclamide-sensitive sarcKATP channel current in the whole-cell recording mode with an EC50 of 182.6 μM. Minoxidil reversibly increased the flavoprotein oxidation, an index of mitoKATP channel activity, in a concentration-dependent manner. The EC50 for mitoKATP channel activation was estimated to be 7.3 μM; this value was notably ≈25-fold lower than that for sarcKATP channel activation. Minoxidil (10 μM) significantly attenuated the ouabain-induced increase of mitochondrial Ca2+ concentration, which was measured by loading cells with rhod-2 fluorescence. Furthermore, pretreatment with minoxidil (10 μM) before 20-min no-flow ischaemia significantly improved the recovery of developed tension measured after 60 min of reperfusion in coronary perfused guinea-pig ventricular muscles. These cardioprotective effects of minoxidil were completely abolished by the mitoKATP channel blocker 5-hydroxydecanoate (500 μM). Our results indicate that minoxidil exerts a direct cardioprotective effect on heart muscle cells, an effect mediated by the selective activation of mitoKATP channels. PMID:14691056

  6. Variability of hydrologic regimes and morphology in constructed open-ditch channels

    Science.gov (United States)

    Strock, J.S.; Magner, J.A.; Richardson, W.B.; Sadowsky, M.J.; Sands, G.R.; Venterea, R.T.; ,

    2004-01-01

    Open-ditch ecosystems are potential transporters of considerable loads of nutrients, sediment, pathogens and pesticides from direct inflow from agricultural land to small streams and larger rivers. Our objective was to compare hydrology and channel morphology between two experimental open-ditch channels. An open-ditch research facility incorporating a paired design was constructed during 2002 near Lamberton, MN. A200-m reach of existing drainage channel was converted into a system of four parallel channels. The facility was equipped with water level control devices and instrumentation for flow monitoring and water sample collection on upstream and downstream ends of the system. Hydrographs from simulated flow during year one indicated that paired open-ditch channels responded similarly to changes in inflow. Variability in hydrologic response between open-ditches was attributed to differences in open-ditch channel bottom elevation and vegetation density. No chemical, biological, or atmospheric measurements were made during 2003. Potential future benefits of this research include improved biological diversity and integrity of open-ditch ecosystems, reduce flood peaks and increased flow during critical low-flow periods, improved and more efficient nitrogen retention within the open-ditch ecosystem, and decreased maintenance cost associated with reduced frequency of open-ditch maintenance.

  7. Development of New Openers of ATP-Sensitive Potassium Channels of the Cell Membranes

    Directory of Open Access Journals (Sweden)

    Strutynskyi, R.B.

    2016-07-01

    Full Text Available Two innovative libraries (413 cyclosulfamides and 709 orthopyridine sulfamides of potential new openers of ATP-sensitive potassium channels of cell membranes were developed. It is shown experimentally that at least ten new original compounds have properties of pharmacological openers of the channels. Seven compounds, namely Z851154982, Z56762024, Z1269122570, Z31153162, Z45679561, Z756371174 and Z649723638, open channels of both types — sarcoplasmic as well as mitochondrial membranes: Simultaneously, Z734043408 compound is a potent activator of aforementioned channels of sarcolemmal membrane only. Z31197374 and Z666664306 compounds show the affinity onlyto КATP-channels of mitochondrial type. The results of the work can be used by pharmaceutical companies and scientific research institutes.

  8. The coefficientof hydraulic friction of laminar open flows in smooth channels

    OpenAIRE

    Borovkov Valeriy Stepanovich; Medzveliya Manana Levanovna

    2015-01-01

    The article examines the dependence of the hydraulic friction coefficient of open laminar uniform streams on the relative width of channels with smooth bottom. The article presents the functional dependence that describes the hydraulic resistance in open channels with smooth bottoms.The experiments were carried out in a rectangular tray (6000×100×200). Aqueous solutions of glycerol were used as working fluids. The superficial tension and liquid density for the used liquids changed a little. T...

  9. Exclusive open-charm near-threshold cross sections in a coupled-channel approach

    CERN Document Server

    Uglov, T V; Nefediev, A V; Pakhlova, G V; Pakhlov, P N

    2016-01-01

    Data on open-charm channels collected by the Belle Collaboration are analysed simultaneously using a unitary approach based on a coupled-channel model in a wide energy range $\\sqrt{s}=3.7\\div 4.7$ GeV. The resulting fit provides a remarkably good overall description of the line shapes in all studied channels. Parameters of 5 vector charmonium resonances are extracted from the fit.

  10. Conformational changes opening and closing the CFTR chloride channel: insights from cysteine scanning mutagenesis.

    Science.gov (United States)

    El Hiani, Yassine; Linsdell, Paul

    2014-12-01

    Cystic fibrosis, the most common lethal genetic disease affecting young people in North America, is caused by failure of the chloride ion channel known as CFTR (cystic fibrosis transmembrane conductance regulator). CFTR belongs to the large family of ATP-binding cassette (ABC) membrane transporters. In CFTR, ATP-driven events at the nucleotide-binding domains (NBDs) open and close a gate that controls chloride permeation. However, the conformational changes concomitant with opening and closing of the CFTR gate are unknown. Diverse techniques including substituted cysteine accessibility method, disulfide cross-linking, and patch-clamp recording have been used to explore CFTR channel structure. Here, we consider the architecture of both the open and the closed CFTR channel. We review how CFTR channel structure changes between the closed and the open channel conformations and portray the relative function of both cytoplasmic and vestigial gates during the gating cycle. Understanding how the CFTR channel gates chloride permeation is central for understanding how CFTR defects lead to CF. Such knowledge opens the door for novel ways to maximize CFTR channel activity in a CF setting.

  11. Temperature and voltage coupling to channel opening in transient receptor potential melastatin 8 (TRPM8).

    Science.gov (United States)

    Raddatz, Natalia; Castillo, Juan P; Gonzalez, Carlos; Alvarez, Osvaldo; Latorre, Ramon

    2014-12-19

    Expressed in somatosensory neurons of the dorsal root and trigeminal ganglion, the transient receptor potential melastatin 8 (TRPM8) channel is a Ca(2+)-permeable cation channel activated by cold, voltage, phosphatidylinositol 4,5-bisphosphate, and menthol. Although TRPM8 channel gating has been characterized at the single channel and macroscopic current levels, there is currently no consensus regarding the extent to which temperature and voltage sensors couple to the conduction gate. In this study, we extended the range of voltages where TRPM8-induced ionic currents were measured and made careful measurements of the maximum open probability the channel can attain at different temperatures by means of fluctuation analysis. The first direct measurements of TRPM8 channel temperature-driven conformational rearrangements provided here suggest that temperature alone is able to open the channel and that the opening reaction is voltage-independent. Voltage is a partial activator of TRPM8 channels, because absolute open probability values measured with fully activated voltage sensors are less than 1, and they decrease as temperature rises. By unveiling the fast temperature-dependent deactivation process, we show that TRPM8 channel deactivation is well described by a double exponential time course. The fast and slow deactivation processes are temperature-dependent with enthalpy changes of 27.2 and 30.8 kcal mol(-1). The overall Q10 for the closing reaction is about 33. A three-tiered allosteric model containing four voltage sensors and four temperature sensors can account for the complex deactivation kinetics and coupling between voltage and temperature sensor activation and channel opening.

  12. Flow and bathymetry in sharp open-channel bends: Experiments and predictions

    NARCIS (Netherlands)

    Zeng, J.; Constantinescu, G.; Blanckaert, K.; Weber, L.

    2008-01-01

    This paper focuses on experiments and simulations conducted in very sharp open-channel bends with flat and equilibrium bathymetry, corresponding to the initial and final phases of the erosion and deposition processes, respectively. The study of flow in curved open bends is relevant for flow in natur

  13. From Pan-Reactive KV7 Channel Opener to Subtype Selective Opener/Inhibitor by Addition of a Methyl Group

    Science.gov (United States)

    Blom, Sigrid Marie; Rottländer, Mario; Kehler, Jan; Bundgaard, Christoffer; Schmitt, Nicole; Jensen, Henrik Sindal

    2014-01-01

    The voltage-gated potassium channels of the KV7 family (KV7.1–5) play important roles in controlling neuronal excitability and are therefore attractive targets for treatment of CNS disorders linked to hyperexcitability. One of the main challenges in developing KV7 channel active drugs has been to identify compounds capable of discriminating between the neuronally expressed subtypes (KV7.2–5), aiding the identification of the subunit composition of KV7 currents in various tissues, and possessing better therapeutic potential for particular indications. By taking advantage of the structure-activity relationship of acrylamide KV7 channel openers and the effects of these compounds on mutant KV7 channels, we have designed and synthesized a novel KV7 channel modulator with a unique profile. The compound, named SMB-1, is an inhibitor of KV7.2 and an activator of KV7.4. SMB-1 inhibits KV7.2 by reducing the current amplitude and increasing the time constant for the slow component of the activation kinetics. The activation of KV7.4 is seen as an increase in the current amplitude and a slowing of the deactivation kinetics. Experiments studying mutant channels with a compromised binding site for the KV7.2–5 opener retigabine indicate that SMB-1 binds within the same pocket as retigabine for both inhibition of KV7.2 and activation of KV7.4. SMB-1 may serve as a valuable tool for KV7 channel research and may be used as a template for further design of better subtype selective KV7 channel modulators. A compound with this profile could hold novel therapeutic potential such as the treatment of both positive and cognitive symptoms in schizophrenia. PMID:24956197

  14. From pan-reactive KV7 channel opener to subtype selective opener/inhibitor by addition of a methyl group.

    Directory of Open Access Journals (Sweden)

    Sigrid Marie Blom

    Full Text Available The voltage-gated potassium channels of the KV7 family (KV7.1-5 play important roles in controlling neuronal excitability and are therefore attractive targets for treatment of CNS disorders linked to hyperexcitability. One of the main challenges in developing KV7 channel active drugs has been to identify compounds capable of discriminating between the neuronally expressed subtypes (KV7.2-5, aiding the identification of the subunit composition of KV7 currents in various tissues, and possessing better therapeutic potential for particular indications. By taking advantage of the structure-activity relationship of acrylamide KV7 channel openers and the effects of these compounds on mutant KV7 channels, we have designed and synthesized a novel KV7 channel modulator with a unique profile. The compound, named SMB-1, is an inhibitor of KV7.2 and an activator of KV7.4. SMB-1 inhibits KV7.2 by reducing the current amplitude and increasing the time constant for the slow component of the activation kinetics. The activation of KV7.4 is seen as an increase in the current amplitude and a slowing of the deactivation kinetics. Experiments studying mutant channels with a compromised binding site for the KV7.2-5 opener retigabine indicate that SMB-1 binds within the same pocket as retigabine for both inhibition of KV7.2 and activation of KV7.4. SMB-1 may serve as a valuable tool for KV7 channel research and may be used as a template for further design of better subtype selective KV7 channel modulators. A compound with this profile could hold novel therapeutic potential such as the treatment of both positive and cognitive symptoms in schizophrenia.

  15. Neuroprotective effect of KR-31378 via KATP channel opening against ischemic insult.

    Science.gov (United States)

    Won, Ran; Lim, Jong-Yoon; Lee, Sang-Yeon; Park, Ji-Ho; Sohn, Nak-Won

    2004-08-01

    The opening of the adenosine triphosphate (ATP)-sensitive potassium (KATP) channel has been proposed as a therapeutic approach for ischemia. Here we examined the opening effect of KR-31378 on the KATP channel using patch clamp recording in neuroblastoma 2a (N2a) cells and investigated the neuroprotective effect of KR-31378 in organotypic hippocampal slice cultures exposed to oxygen/glucose deprivation. The treatment with KR-31378 (10 microM) to N2a cells seemed to induce KATP channel opening in a dose dependent manner. The opening effect of KR-31378 was more significant than that of other known KATP channel openers. Pretreatment with KR-31378 (10 microM) showed a neuroprotective effect in both CA1 and CA3 regions and its effect was attenuated by glibenclamide in a dose dependent manner in both areas. This remarkable neuroprotective effect of KR-31378 seemed to be mediated by the opening of the KATP channel. These results suggest that KR-31378 could be a possible neuroprotective agent against cerebral ischemia.

  16. Acetylcholine receptor: channel-opening kinetics evaluated by rapid chemical kinetic and single-channel current measurements.

    Science.gov (United States)

    Udgaonkar, J. B.; Hess, G. P.

    1987-01-01

    A combination of rapid chemical kinetic (quench-flow) and single-channel current measurements was used to evaluate kinetic parameters governing the opening of acetylcholine-receptor channels in the electric organ (electroplax) of Electrophorus electricus. Chemical kinetic measurements made on membrane vesicles, prepared from the E. electricus electroplax, using carbamoylcholine (200 microM-20 mM) at 12 degrees C, pH 7.0, and in the absence of a transmembrane voltage, yielded values for K1 (dissociation constant for receptor activation), phi (channel closing equilibrium constant), J (specific reaction rate for ion flux), and alpha max (maximum inactivation rate constant) of 1 mM, 3.4, 4 x 10(7) M-1 s-1, and 12 s-1, respectively. The single-channel current recordings were made with cells also from the E. electricus electroplax, at the same temperature and pH as the chemical kinetic measurements, using carbamoylcholine (50 microM-2 mM), acetylcholine (500 nM), or suberyldicholine (20 nM). Single-channel current measurements indicated the presence of a single, unique open-channel state of the E. electricus receptor, in concurrence with previous, less extensive measurements. The rate constant for channel closing (kc) obtained from the mean open time of the receptor channel is 1,100 s-1 for carbamoylcholine, 1,200 s-1 for acetylcholine, and 360 s-1 for suberyldicholine at zero membrane potential; and it decreases e-fold for an 80 mV decrease in transmembrane voltage in each case. The decrease in mean open times of the receptor channel that is associated with increasing the carbamoylcholine concentration is interpreted to be due to carbamoylcholine binding to the regulatory (inhibitory) site on the receptor. An analysis of data obtained with carbamoylcholine showed that the closed times within a burst of channel activity fit a two-exponential distribution, with a concentration-independent time constant considered to be the time constant for carbamoylcholine to dissociate

  17. Measurement of turbulent flow in a narrow open channel

    Directory of Open Access Journals (Sweden)

    Sarkar Sankar

    2016-09-01

    Full Text Available The paper presents the experimental results of turbulent flow over hydraulically smooth and rough beds. Experiments were conducted in a rectangular flume under the aspect ratio b/h = 2 (b = width of the channel 0.5 m, and h = flow depth 0.25 m for both the bed conditions. For the hydraulically rough bed, the roughness was created by using 3/8″ commercially available angular crushed stone chips; whereas sand of a median diameter d50 = 1.9 mm was used as the bed material for hydraulically smooth bed. The three-dimensional velocity components were captured by using a Vectrino (an acoustic Doppler velocimeter. The study focuses mainly on the turbulent characteristics within the dip that were observed towards the sidewall (corner of the channel where the maximum velocity occurs below the free-surface. It was also observed that the nondimensional Reynolds shear stress changes its sign from positive to negative within the dip. The quadrant plots for the turbulent bursting shows that the signs of all the bursting events change within the dip. Below the dip, the probability of the occurrence of sweeps and ejections are more than that of inward and outward interactions. On the other hand, within the dip, the probability of the occurrence of the outward and inward interactions is more than that of sweeps and ejections.

  18. Roscovitine differentially affects CaV2 and Kv channels by binding to the open state.

    Science.gov (United States)

    Buraei, Zafir; Schofield, Geoffrey; Elmslie, Keith S

    2007-03-01

    Roscovitine potently inhibits cyclin-dependent kinases (CDK) and can independently slow the closing of neuronal (CaV2.2) calcium channels. We were interested if this drug could affect other ion channels similarly. Using whole cell recordings, we found that roscovitine specifically slows deactivation of all CaV2 channels (N, P/Q and R) by binding to the open state. This effect had a rapid onset and EC(50)=54, 120 and 54microM for N-, P/Q-, and R-type channels, respectively. Deactivation of other channel types was not slowed, including L-type calcium channels (CaV1.2, CaV1.3), potassium channels (native, Kv4.2, Kv2.1 and Kv1.3), and native sodium channels. However, most of the channels tested were inhibited by roscovitine. The inhibition was characterized by slow development and a lower affinity (EC(50)=100-300microM). Surprisingly, potassium channels were rapidly inhibited with an EC(50)=23microM, which is similar to the EC(50) for roscovitine block of cell division [Meijer, L., Borgne, A., Mulner, O., Chong, J., Blow, J., Inagaki, N., Inagaki, M., Delcros, J., Moulinoux, J., 1997. Biochemical and cellular effects of roscovitine, a potent and selective inhibitor of the cyclin-dependent kinases cdc2, cdk2 and cdk5. Eur. J. Biochem. 243, 527-536]. Potassium current inhibition seemed to result from open channel block. The high potency of these two rapid onset effects makes them complicating factors for ongoing clinical trials and research using roscovitine. Thus, the physiology and pharmacology of slow CaV2 deactivation and potassium channel block must be explored.

  19. Effect of flow field on open channel flow properties using numerical investigation and experimental comparison

    Energy Technology Data Exchange (ETDEWEB)

    Khazaee, I. [Department of Mechanical Engineering, Torbat-e-jam branch, Islamic Azad University, Torbat-e-jam (Iran, Islamic Republic of); Mohammadiun, M. [Department of Mechanical Engineering, Shahrood branch, Islamic Azad University, Shahrood (Iran, Islamic Republic of)

    2012-07-01

    In this paper a complete three-dimensional and two phase CFD model for flow distribution in an open channel investigated. The finite volume method (FVM) with a dynamic Sub grid-scale was carried out for seven cases of different aspect ratios, different inclination angles or slopes and convergence-divergence condition. The volume of fluid (VOF) method was used to allow the free-surface to deform freely with the underlying turbulence. The discharge through open channel flow is often evaluated by velocity-area integration method from the measurement of velocity at discrete locations in the measuring section. The variation of velocity along horizontal and vertical directions is thus very important to decide the location of the sensors. The aspect ratio of the channel, slope of the channel and divergence- convergence of the channel have investigated and the results show that the depth of water at the end of the channel is higher at AR=0.8 against the AR=0.4 and AR=1.2. Also it is clear that by increasing the inclination angle or slope of the channel in case1, case4 and case5 the depth of the water increases. Also it is clear that the outlet mass flow rate is at a minimum value at a range of inclination angle of the channel.

  20. Numerical simulation of turbulent flow in helically coiled open-channels with compound cross-sections

    Institute of Scientific and Technical Information of China (English)

    SHAO; Xuejun; WANG; Hong; CHEN; Zhi

    2004-01-01

    Turbulence structure in a helically coiled open channel flow is numerically simulated using three different turbulence models--the Launder and Ying model, the Naot and Rodi model, and the nonlinear k-ε Model (SY model). Simulation results were compared with observation of (i) turbulent flows in alternating point-bar type channel bends with rectangular sections, and (ii) straight open channel flows with compound cross-sections. Based on calculations of the impact of various channel curvatures on turbulence characteristics, accuracy of the three turbulence models was analyzed with observed data as a qualitative reference. It has been found out that the Launder and Ying model and the nonlinear k-ε Model are able to predict the same general trend as measured data, and the simulation of the effect of the centrifugal force on the formation of secondary currents produces a correct pattern.

  1. Solving non-Markovian open quantum systems with multi-channel reservoir coupling

    CERN Document Server

    Broadbent, Curtis J; Yu, Ting; Eberly, Joseph H

    2011-01-01

    We extend the non-Markovian quantum state diffusion (QSD) equation to open quantum systems which exhibit multi-channel coupling to a harmonic oscillator reservoir. Open quantum systems which have multi-channel reservoir coupling are those in which canonical transformation of reservoir modes cannot reduce the number of reservoir operators appearing in the interaction Hamiltonian to one. We show that the non-Markovian QSD equation for multi-channel reservoir coupling can, in some cases, lead to an exact master equation which we derive. We then derive the exact master equation for the three-level system in a vee-type configuration which has multi-channel reservoir coupling and give the analytical solution. Finally, we examine the evolution of the three-level vee-type system with generalized Ornstein-Uhlenbeck reservoir correlations numerically.

  2. Solving non-Markovian open quantum systems with multi-channel reservoir coupling

    Science.gov (United States)

    Broadbent, Curtis J.; Jing, Jun; Yu, Ting; Eberly, Joseph H.

    2012-08-01

    We extend the non-Markovian quantum state diffusion (QSD) equation to open quantum systems which exhibit multi-channel coupling to a harmonic oscillator reservoir. Open quantum systems which have multi-channel reservoir coupling are those in which canonical transformation of reservoir modes cannot reduce the number of reservoir operators appearing in the interaction Hamiltonian to one. We show that the non-Markovian QSD equation for multi-channel reservoir coupling can, in some cases, lead to an exact master equation which we derive. We then derive the exact master equation for the three-level system in a vee-type configuration which has multi-channel reservoir coupling and give the analytical solution. Finally, we examine the evolution of the three-level vee-type system with generalized Ornstein-Uhlenbeck reservoir correlations numerically.

  3. Nitric oxide suppresses stomatal opening by inhibiting inward-rectifying Kin channels in Arabidopsis guard cells

    Institute of Scientific and Technical Information of China (English)

    XUE ShaoWu; YANG Pin; HE YiKun

    2008-01-01

    We explore nitric oxide (NO) effect on K+in channels in Arabidopsis guard cells. We observed NO inhib-ited K+in currents when Ca2+ chelator EGTA (Ethylene glycol-bis(2-aminoethylether)-N,N,N',N'tetraacetic acid) was not added in the pipette solution; K+in currents were not sensitive to NO when cytosolic Ca2+ was chelated by EGTA. NO inhibited the Arabidopsis stomatal opening, but when EGTA was added in the bath solution, inhibition effect of NO on stomatal opening vanished. Thus, it implies that NO ele-vates cytosolic Ca2+ by activating plasma membrane Ca2+ channels firstly, then inactivates K+in chan-nels, resulting in stomatal opening suppressed subsequently.

  4. A MODIFIED SIMPLE ALGORITHM FOR 2-D FLOW IN OPEN CHANNEL

    Institute of Scientific and Technical Information of China (English)

    2000-01-01

    For two-dimensional water flow in open channel, by discritizing hydrodynamic differential equation of conservative form, the corresponding algebraic equations were derived which involve the relationship between velocity and depth. Based on the relationship, this paper deduced a modified formula of velocity correction for SIMPLE algorithm. As a test case, the flow in a prismatic channel with two different slopes was computed and a good result was obtained.

  5. Double-Channel Stereoscopic Display Technology Based on OpenGL

    Directory of Open Access Journals (Sweden)

    Liu Shu

    2013-01-01

    Full Text Available The multi-channel stereoscopic display technology has become an attractive frontier research area in recent years, supporting users with correct spatial perception and large vision experience. This paper studies on the easiest case of double-channel. Focusing on the problem of complex network programming in traditional synchronous display method, a design plan of double-channel stereoscopic display system on one PC based on OpenGL is proposed, which reflects some innovation of the paper. A series of performance tests have been taken and the results agree well with the need for three-dimensional effect and synchronism.

  6. Solving non-Markovian open quantum systems with multi-channel reservoir coupling

    Energy Technology Data Exchange (ETDEWEB)

    Broadbent, Curtis J., E-mail: curtis.broadbent@rochester.edu [Rochester Theory Center, and Department of Physics and Astronomy, University of Rochester, Rochester, NY 14627 (United States); Jing, Jun; Yu, Ting [Center for Controlled Quantum Systems, and the Department of Physics and Engineering Physics, Stevens Institute of Technology, Hoboken, NJ 07030 (United States); Eberly, Joseph H. [Rochester Theory Center, and Department of Physics and Astronomy, University of Rochester, Rochester, NY 14627 (United States)

    2012-08-15

    We extend the non-Markovian quantum state diffusion (QSD) equation to open quantum systems which exhibit multi-channel coupling to a harmonic oscillator reservoir. Open quantum systems which have multi-channel reservoir coupling are those in which canonical transformation of reservoir modes cannot reduce the number of reservoir operators appearing in the interaction Hamiltonian to one. We show that the non-Markovian QSD equation for multi-channel reservoir coupling can, in some cases, lead to an exact master equation which we derive. We then derive the exact master equation for the three-level system in a vee-type configuration which has multi-channel reservoir coupling and give the analytical solution. Finally, we examine the evolution of the three-level vee-type system with generalized Ornstein-Uhlenbeck reservoir correlations numerically. - Highlights: Black-Right-Pointing-Pointer The concept of multi-channel vs. single-channel reservoir coupling is rigorously defined. Black-Right-Pointing-Pointer The non-Markovian quantum state diffusion equation for arbitrary multi-channel reservoir coupling is derived. Black-Right-Pointing-Pointer An exact time-local master equation is derived under certain conditions. Black-Right-Pointing-Pointer The analytical solution to the three-level system in a vee-type configuration is found. Black-Right-Pointing-Pointer The evolution of the three-level system under generalized Ornstein-Uhlenbeck noise is plotted for many parameter regimes.

  7. K+ channel openers restore verapamil-inhibited lung fluid resolution and transepithelial ion transport

    Science.gov (United States)

    2010-01-01

    Background Lung epithelial Na+ channels (ENaC) are regulated by cell Ca2+ signal, which may contribute to calcium antagonist-induced noncardiogenic lung edema. Although K+ channel modulators regulate ENaC activity in normal lungs, the therapeutical relevance and the underlying mechanisms have not been completely explored. We hypothesized that K+ channel openers may restore calcium channel blocker-inhibited alveolar fluid clearance (AFC) by up-regulating both apical and basolateral ion transport. Methods Verapamil-induced depression of heterologously expressed human αβγ ENaC in Xenopus oocytes, apical and basolateral ion transport in monolayers of human lung epithelial cells (H441), and in vivo alveolar fluid clearance were measured, respectively, using the two-electrode voltage clamp, Ussing chamber, and BSA protein assays. Ca2+ signal in H441 cells was analyzed using Fluo 4AM. Results The rate of in vivo AFC was reduced significantly (40.6 ± 6.3% of control, P minoxidil) channel openers significantly recovered AFC. In addition to short-circuit current (Isc) in intact H441 monolayers, both apical and basolateral Isc levels were reduced by verapamil in permeabilized monolayers. Moreover, verapamil significantly altered Ca2+ signal evoked by ionomycin in H441 cells. Depletion of cytosolic Ca2+ in αβγ ENaC-expressing oocytes completely abolished verapamil-induced inhibition. Intriguingly, KV (pyrithione-Na), K Ca3.1 (1-EBIO), and KATP (minoxidil) channel openers almost completely restored the verapamil-induced decrease in Isc levels by diversely up-regulating apical and basolateral Na+ and K+ transport pathways. Conclusions Our observations demonstrate that K+ channel openers are capable of rescuing reduced vectorial Na+ transport across lung epithelial cells with impaired Ca2+ signal. PMID:20507598

  8. K+ channel openers restore verapamil-inhibited lung fluid resolution and transepithelial ion transport

    Directory of Open Access Journals (Sweden)

    Su Xue-Feng

    2010-05-01

    Full Text Available Abstract Background Lung epithelial Na+ channels (ENaC are regulated by cell Ca2+ signal, which may contribute to calcium antagonist-induced noncardiogenic lung edema. Although K+ channel modulators regulate ENaC activity in normal lungs, the therapeutical relevance and the underlying mechanisms have not been completely explored. We hypothesized that K+ channel openers may restore calcium channel blocker-inhibited alveolar fluid clearance (AFC by up-regulating both apical and basolateral ion transport. Methods Verapamil-induced depression of heterologously expressed human αβγ ENaC in Xenopus oocytes, apical and basolateral ion transport in monolayers of human lung epithelial cells (H441, and in vivo alveolar fluid clearance were measured, respectively, using the two-electrode voltage clamp, Ussing chamber, and BSA protein assays. Ca2+ signal in H441 cells was analyzed using Fluo 4AM. Results The rate of in vivo AFC was reduced significantly (40.6 ± 6.3% of control, P Ca3.1 (1-EBIO and KATP (minoxidil channel openers significantly recovered AFC. In addition to short-circuit current (Isc in intact H441 monolayers, both apical and basolateral Isc levels were reduced by verapamil in permeabilized monolayers. Moreover, verapamil significantly altered Ca2+ signal evoked by ionomycin in H441 cells. Depletion of cytosolic Ca2+ in αβγ ENaC-expressing oocytes completely abolished verapamil-induced inhibition. Intriguingly, KV (pyrithione-Na, K Ca3.1 (1-EBIO, and KATP (minoxidil channel openers almost completely restored the verapamil-induced decrease in Isc levels by diversely up-regulating apical and basolateral Na+ and K+ transport pathways. Conclusions Our observations demonstrate that K+ channel openers are capable of rescuing reduced vectorial Na+ transport across lung epithelial cells with impaired Ca2+ signal.

  9. Collecting a better water-quality sample: Reducing vertical stratification bias in open and closed channels

    Science.gov (United States)

    Selbig, William R.

    2017-01-01

    Collection of water-quality samples that accurately characterize average particle concentrations and distributions in channels can be complicated by large sources of variability. The U.S. Geological Survey (USGS) developed a fully automated Depth-Integrated Sample Arm (DISA) as a way to reduce bias and improve accuracy in water-quality concentration data. The DISA was designed to integrate with existing autosampler configurations commonly used for the collection of water-quality samples in vertical profile thereby providing a better representation of average suspended sediment and sediment-associated pollutant concentrations and distributions than traditional fixed-point samplers. In controlled laboratory experiments, known concentrations of suspended sediment ranging from 596 to 1,189 mg/L were injected into a 3 foot diameter closed channel (circular pipe) with regulated flows ranging from 1.4 to 27.8 ft3 /s. Median suspended sediment concentrations in water-quality samples collected using the DISA were within 7 percent of the known, injected value compared to 96 percent for traditional fixed-point samplers. Field evaluation of this technology in open channel fluvial systems showed median differences between paired DISA and fixed-point samples to be within 3 percent. The range of particle size measured in the open channel was generally that of clay and silt. Differences between the concentration and distribution measured between the two sampler configurations could potentially be much larger in open channels that transport larger particles, such as sand.

  10. A novel mechanism for fine-tuning open-state stability in a voltage-gated potassium channel

    DEFF Research Database (Denmark)

    Pless, Stephan Alexander; Niciforovic, Ana P; Galpin, Jason D

    2013-01-01

    Voltage-gated potassium channels elicit membrane hyperpolarization through voltage-sensor domains that regulate the conductive status of the pore domain. To better understand the inherent basis for the open-closed equilibrium in these channels, we undertook an atomistic scan using synthetic fluor...... that the intrinsic open-state destabilization via aromatic repulsion represents a new mechanism by which ion channels, and likely other proteins, fine-tune conformational equilibria.......Voltage-gated potassium channels elicit membrane hyperpolarization through voltage-sensor domains that regulate the conductive status of the pore domain. To better understand the inherent basis for the open-closed equilibrium in these channels, we undertook an atomistic scan using synthetic...... fluorinated derivatives of aromatic residues previously implicated in the gating of Shaker potassium channels. Here we show that stepwise dispersion of the negative electrostatic surface potential of only one site, Phe481, stabilizes the channel open state. Furthermore, these data suggest that this apparent...

  11. Comparison сharacreristics of optrons with an open optical channel

    Directory of Open Access Journals (Sweden)

    Shvets O. H.

    2008-06-01

    Full Text Available In the present work characteristics of industrial optical sensors for objects positioning in space are considered. Comparison of their parameters with the parameters of the angular-linear displacement sensor designed has been made. Methods for optimization parameters of sensors with an open optical channel are proposed.

  12. Stationary bottom generated velocity fluctuations in one-dimensional open channel flow

    NARCIS (Netherlands)

    Jong, de Bartele

    1993-01-01

    Statistical characteristics are calculated for stationary velocity fluctuations in a one-dimensional open channel flow with a given vertical velocity profile and with one-dimensional irregular bottom waves, characterized by a spectral density function. The calculations are based on an approximate ca

  13. Large-eddy simulation of a curved open-channel flow over topography

    NARCIS (Netherlands)

    Van Balen, W.; Uijttewaal, W.S.J.; Blanckaert, K.

    2010-01-01

    Large-eddy simulation (LES) is performed of a curved open-channel flow over topography based on the laboratory experiment by Blanckaert [“Topographic steering, flow circulation, velocity redistribution and bed topography in sharp meander bends,” Water Resour. Res., doi:10.1029/2009WR008303 (in press

  14. Large-eddy simulation of a mildly curved open-channel flow

    NARCIS (Netherlands)

    Van Balen, W.; Uijttewaal, W.S.J.; Blanckaert, K.

    2009-01-01

    After validation with experimental data, large-eddy simulation (LES) is used to study in detail the open-channel flow through a curved flume. Based on the LES results, the present paper addresses four issues. Firstly, features of the complex bicellular pattern of the secondary flow, occurring in cur

  15. Large-eddy simulation of a curved open-channel flow over topography

    NARCIS (Netherlands)

    Van Balen, W.; Uijttewaal, W.S.J.; Blanckaert, K.

    2010-01-01

    Large-eddy simulation (LES) is performed of a curved open-channel flow over topography based on the laboratory experiment by Blanckaert [“Topographic steering, flow circulation, velocity redistribution and bed topography in sharp meander bends,” Water Resour. Res., doi:10.1029/2009WR008303 (in press

  16. Modes of Access: The Influence of Dissemination Channels on the Use of Open Access Monographs

    Science.gov (United States)

    Snijder, Ronald

    2014-01-01

    Introduction: This paper studies the effects of several dissemination channels in an open access environment by analysing the download data of the OAPEN Library. Method: Download data were obtained containing the number of downloads and the name of the Internet provider. Based on public information, each Internet provider was categorised. The…

  17. A Computer Method of Steady Non-Uniform Gradually Varied Flow in Open Channel & in River

    Institute of Scientific and Technical Information of China (English)

    1999-01-01

    Most of water flow in open channel or in river belongs to steady non-uniform flow. The surface profiles are caused by changes of channel section. It is very important to analyze its computation. According to the regularity of its surface change, the suitable sectional dimensions of open channel or flood control work can be designed. Commonly, computation of non-uniform flow adopts the traditional methods by hand or by graphic method. The speed and precision of computation are restricted. In this paper, a software to calculate water surface profile is introduced. The software is put forward by using C++ .By means of interpolate method and dialogue between user and computer, we can calculate the water surface profile much more quickly and exactly.

  18. THRESHOLD CONDITION FOR CHOCKING IN OPEN CHANNELS AND EXCAVATION OF TAILRACE

    Institute of Scientific and Technical Information of China (English)

    NI Han-gen; LIU Ya-kun

    2005-01-01

    On the basis of energy and continuity equations a general threshold condition for chocking in open channels is obtained and a representation in terms of the Froude number at the upstream section and other parameters is given to predict whether the chocking phenomenon occurs or not at the downstream section.From the general threshold condition for chocking the limit contraction ratios of the channel width are introduced for both with and without the energy losses and a criterion for excavation of the tailrace to avoid chocking is derived.An example shows that using these criterion and the representation proposed for calculating flow depth it is very easy to determine the scheme of the excavation of the open channels.

  19. The coefficientof hydraulic friction of laminar open flows in smooth channels

    Directory of Open Access Journals (Sweden)

    Borovkov Valeriy Stepanovich

    2015-05-01

    Full Text Available The article examines the dependence of the hydraulic friction coefficient of open laminar uniform streams on the relative width of channels with smooth bottom. The article presents the functional dependence that describes the hydraulic resistance in open channels with smooth bottoms.The experiments were carried out in a rectangular tray (6000×100×200. Aqueous solutions of glycerol were used as working fluids. The superficial tension and liquid density for the used liquids changed a little. The article declares that the coefficient of hydraulic friction λ in the zone of the laminar flow depends on the relative width of the channels with smooth bottom. In the article it is also shown that the Charny formula satisfactorily agrees with the theoretical formula and with the experimental data.

  20. Velocity distribution measurements in a fishway like open channel by Laser Doppler Anemometry (LDA)

    Science.gov (United States)

    Sayeed-Bin-Asad, S. M.; Lundström, T. S.; Andersson, A. G.; Hellström, J. G. I.

    2016-03-01

    Experiments in an open channel flume with placing a vertical half cylinder barrier have been performed in order to investigate how the upstream velocity profiles are affected by a barrier. An experimental technique using Laser Doppler Velocimetry (LDV) was adopted to measure these velocity distributions in the channel for four different discharge rates. Velocity profiles were measured very close to wall and at 25, 50 and 100 mm upstream of the cylinder wall. For comparing these profiles with well-known logarithmic velocity profiles, velocity profiles were also measured in smooth open channel flow for all same four discharge rates. The results indicate that regaining the logarithmic velocity profiles upstream of the half cylindrical barrier occurs at 100 mm upstream of the cylinder wall.

  1. Velocity distribution measurements in a fishway like open channel by Laser Doppler Anemometry (LDA

    Directory of Open Access Journals (Sweden)

    Sayeed-Bin-Asad S.M.

    2016-01-01

    Full Text Available Experiments in an open channel flume with placing a vertical half cylinder barrier have been performed in order to investigate how the upstream velocity profiles are affected by a barrier. An experimental technique using Laser Doppler Velocimetry (LDV was adopted to measure these velocity distributions in the channel for four different discharge rates. Velocity profiles were measured very close to wall and at 25, 50 and 100 mm upstream of the cylinder wall. For comparing these profiles with well-known logarithmic velocity profiles, velocity profiles were also measured in smooth open channel flow for all same four discharge rates. The results indicate that regaining the logarithmic velocity profiles upstream of the half cylindrical barrier occurs at 100 mm upstream of the cylinder wall.

  2. Investigation of a corrugated channel flow with an open source PIV software

    Directory of Open Access Journals (Sweden)

    Sivas Deniz

    2016-01-01

    Full Text Available In this study, the corrugated channel flow was investigated by using an open-source particle image velocimetry (PIV software. The open-source software called OpenPIV was first verified by using images of an earlier experimental work of a vortex ring formation. The corrugated channel flow images were taken with 200 W power LED light source and a high speed camera and those images were analysed with these spatial and temporal tools of OpenPIV. Laminar, transient and turbulent flow regimes were identified when Reynolds number was below 1100, in between 1100 and 2000 and higher than 2000, respectively. The velocity vectors were found to be about 20% lower than the previous study results. The flow inside the grooves was also investigated with OpenPIV and flow characteristics at the grooves were captured when interrogation window size was lowered. The visualization of the flow was presented for different Reynolds numbers with the relative scale values. As a result of this study, OpenPIV software was determined as promising open source PIV analysis software.

  3. Morphology of the 1984 open-channel lava flow at Krafla volcano, northern Iceland

    Science.gov (United States)

    Rossi, Matti J.

    1997-09-01

    An open-channel lava flow of olivine tholeiite basalt, 9 km long and 1-2 km wide, formed in a volcanic eruption that took place in the Krafla volcano, Iceland, on the 4-18 September 1984. The eruption started with emplacement of a pahoehoe sheet which was fed by a 8.5-km-long fissure. After two days of eruption, lava effusion from the fissure ceased but one crater at the northern end of the fissure continued to release lava for another twelve days. That crater supplied an open-channel flow that moved toward the north along the rift valley. The lava was emplaced on a slope of 1°. The final lava flow is composed of five flow facies: (1) the initial pahoehoe sheet; (2) proximal slab pahoehoe and aa; (3) shelly-type overflows from the channel; (4) distal rubbly aa lava; and (5) secondary outbreaks of toothpaste lava and cauliflower aa. The main lava channel within the flow is 6.4 km long. The mean width of this channel is 189 m (103 m S.D.). An initial lava channel that forms in a Bingham plastic substance is fairly constant in width. This channel, however, varies in width especially in the proximal part indicating channel erosion. Large drifted blocks of channel walls are found throughout the flow front area and on the top of overflow levees. This suggests that the channel erosion was mainly mechanical. The lava flow has a mean height of 6 m above its surroundings, measured at the flow margins. However, a study of the pre-flow topography indicates that the lava filled a considerable topographic depression. Combined surface and pre-flow profiles give an average lava-flow thickness of 11 m; the thickness of the initial sheet-flow is estimated as 2 m. The volume of the lava flow calculated from these figures is 0.11 km 3. The mean effusion rate was 91 m 3/s. When lava flow models are used to deduce the rheological properties of this type of lava flow, the following points must be considered: (1) when a lava flow is emplaced along tectonic lineaments, its depth and

  4. Linear Modeling and Regulation Quality Analysis for Hydro-Turbine Governing System with an Open Tailrace Channel

    Directory of Open Access Journals (Sweden)

    Jiandong Yang

    2015-10-01

    Full Text Available On the basis of the state–space method (SSM, a novel linear mathematical model of the unsteady flow for the tailrace system with an open channel is proposed. This novel model is an elastic linearized model of water hammer. The validity of the model has been verified by several examples of numerical simulation, which are based on a finite difference technique. Then, the complete mathematical model for the hydro-turbine governing system of hydropower station with an open tailrace channel, which is used for simulating the transient process of the hydro-turbine governing system under load disturbance, is established by combining the models of hydro-turbine, generator, governor and open tailrace channel. Finally, according to the complete model, the regulation quality for hydro-turbine governing system with an open tailrace channel under load disturbance is studied, and the effects of open tailrace channel and tailrace surge tank on regulation quality are analyzed. The results indicate that: The open tailrace channel has a strong influence on the regulation quality by observing the water level fluctuations in tailrace surge tank. The surge shows a piecewise periodical change along with the variation in the length of an open channel. The open tailrace channel can be used to improve the regulation quality of hydro-turbine governing system.

  5. Numerical study on flow rate limitation of open capillary channel flow through a wedge

    Directory of Open Access Journals (Sweden)

    Ting-Ting Zhang

    2016-04-01

    Full Text Available The flow characteristics of slender-column flow in wedge-shaped channel under microgravity condition are investigated in this work. The one-dimensional theoretical model is applied to predict the critical flow rate and surface contour of stable flow. However, the one-dimensional model overestimates the critical flow rate for not considering the extra pressure loss. Then, we develop a three-dimensional simulation method with OpenFOAM, a computational fluid dynamics tool, to simulate various phenomena in wedge channels with different lengths. The numerical results are verified with the capillary channel flow experimental data on the International Space Station. We find that the three-dimensional simulation perfectly predicts the critical flow rates and surface contours under various flow conditions. Meanwhile, the general behaviors in subcritical, critical, and supercritical flow are studied in three-dimensional simulation considering variations of flow rate and open channel length. The numerical techniques for three-dimensional simulation is validated for a wide range of configurations and is hopeful to provide valuable guidance for capillary channel flow experiment and efficient liquid management in space.

  6. Performance Prediction of Darrieus-Type Hydroturbine with Inlet Nozzle Operated in Open Water Channels

    Science.gov (United States)

    Nakashima, K.; Watanabe, S.; Matsushita, D.; Tsuda, S.; Furukawa, A.

    2016-11-01

    Small hydropower is one of the renewable energies and is expected to be effectively used for local supply of electricity. We have developed Darrieus-type hydro-turbine systems, and among them, the Darrieus-turbine with a weir and a nozzle installed upstream of turbine is, so far, in success to obtain more output power by gathering all water into the turbine. However, there can several cases exist, in which installing the weir covering all the flow channel width is unrealistic, and in such cases, the turbine should be put alone in open channels without upstream weir. Since the output power is very small in such a utilization of small hydropower, it is important to derive more power for the cost reduction. In the present study, we parametrically investigate the preferable shape of the inlet nozzle for the Darrieus-type hydroturbine operated in an open flow channel. Experimental investigation is carried out in the open channel in our lab. Tested inlet nozzles are composed of two flat plates with the various nozzle converging angles and nozzle outlet (runner inlet) widths with the nozzle inlet width kept constant. As a result, the turbine with the nozzles having large converging angle and wide outlet width generates higher power. Two-dimensional unsteady numerical simulation is also carried out to qualitatively understand the flow mechanism leading to the better performance of turbine. Since the depth, the width and the flow rate in the real open flow channels are different from place to place and, in some cases from time to time, it is also important to predict the onsite performance of the hydroturbine from the lab experiment at planning stage. One-dimensional stream-tube model is developed for this purpose, in which the Darrieus-type hydroturbine with the inlet nozzle is considered as an actuator-disk modelled based on our experimental and numerical results.

  7. KR-31762, a novel KATP channel opener, exerts cardioprotective effects by opening SarcKATP channels in rat models of ischemia/reperfusion-induced heart injury.

    Science.gov (United States)

    Lee, Sung-Hun; Yang, Min-Kyu; Lim, Jong-Hyun; Seo, Ho-Won; Yi, Kyu-Yang; Yoo, Sung-Eun; Lee, Byung-Ho; Won, Hyung-Sik; Lee, Chang-Soo; Choi, Wahn-Soo; Shin, Hwa-Sup

    2008-04-01

    The cardioprotective effects of KR-31762, a newly synthesized K+(ATP) opener, were evaluated in rat models of ischemia/reperfusion (I/R) heart injury. In isolated rat hearts subjected to 30-min global ischemia followed by 30-min reperfusion, KR-31762 (3 and 10 microM) significantly increased the left ventricular developed pressure (LVDP) and double product (heart rate x LVDP) after 30-min reperfusion in a concentration-dependent manner, while decreasing the left ventricular end-diastolic pressure (LVEDP). KR-31762 also significantly increased the time to contracture (TTC) during ischemic period (20.0, 22.4 and 26.4 min for control, 3 and 10 microM, respectively), while decreasing the release of lactate dehydrogenase (LDH) from the heart during 30 min reperfusion (30.4, 14.3 and 19.7 U/g heart weight, respectively). All these parameters except LDH release were reversed by glyburide (1 microM), a nonselective blocker of K+(ATP) channel, but not by 5-hydroxydecanoate, a selective blocker of mitoK+(ATP) channel. In anesthetized rats subjected to 45-min occlusion of left anterior descending coronary artery followed by 90-min reperfusion, KR-31762 significantly decreased the infarct size (60.8, 40.5 and 37.8% for control, 0.3 and 1.0 mg/kg, iv, respectively). KR-31762 slightly relaxed the isolated rat aorta precontracted with methoxamine (IC(50): 23.5 microM). These results suggest that KR-31762 exerts potent cardioprotective effects through the opening of sarcolemmal K(ATP) channel in rat hearts with the minimal vasorelaxant effects.

  8. Position and motions of the S4 helix during opening of the Shaker potassium channel.

    Science.gov (United States)

    Phillips, L Revell; Swartz, Kenton J

    2010-12-01

    The four voltage sensors in voltage-gated potassium (Kv) channels activate upon membrane depolarization and open the pore. The location and motion of the voltage-sensing S4 helix during the early activation steps and the final opening transition are unresolved. We studied Zn(2+) bridges between two introduced His residues in Shaker Kv channels: one in the R1 position at the outer end of the S4 helix (R362H), and another in the S5 helix of the pore domain (A419H or F416H). Zn(2+) bridges readily form between R362H and A419H in open channels after the S4 helix has undergone its final motion. In contrast, a distinct bridge forms between R362H and F416H after early S4 activation, but before the final S4 motion. Both bridges form rapidly, providing constraints on the average position of S4 relative to the pore. These results demonstrate that the outer ends of S4 and S5 remain in close proximity during the final opening transition, with the S4 helix translating a significant distance normal to the membrane plane.

  9. Gradually-varied flow profiles in open channels analytical solutions by using Gaussian hypergeometric function

    CERN Document Server

    Jan, Chyan-Deng

    2014-01-01

    Gradually-varied flow (GVF) is a steady non-uniform flow in an open channel with gradual changes in its water surface elevation. The evaluation of GVF profiles under a specific flow discharge is very important in hydraulic engineering. This book proposes a novel approach to analytically solve the GVF profiles by using the direct integration and Gaussian hypergeometric function. Both normal-depth- and critical-depth-based dimensionless GVF profiles are presented. The novel approach has laid the foundation to compute at one sweep the GVF profiles in a series of sustaining and adverse channels, w

  10. Open channel flows of magnetic fluid induced by traveling magnetic field

    Science.gov (United States)

    Kuwahara, Takuya; Okubo, Masaaki; Yamane, Ryuichiro

    A theoretical analysis is made on laminar open channel flows of magnetic fluid induced by a non uniform traveling magnetic field which is applied with a stator of a single-sided linear induction motor. The induced flows are mainly in the direction opposite to the traveling direction of the magnetic field and in proportion to the phase velocity of the magnetic field. The velocity profiles are greatly affected by dimensionless wave number of the magnetic field. Near the bottom of the channel, the theoretical velocity distributions agree well with experimental ones which are measured with a laser optical fiber velocity sensor. However, the experimental velocity distributions become larger near the free surface.

  11. EXPERIMENTAL STUDY OF LANDSLIDE DAM-BREAK FLOOD OVER ERODIBLE BED IN OPEN CHANNELS

    Institute of Scientific and Technical Information of China (English)

    YAN Jun; CAO Zhi-xian; LIU Huai-han; CHEN Li

    2009-01-01

    Large-scale landslide dams may block the river flow and cause inundation upstream,and subsequently fail and result in severe flooding and damage in the downstream.The need for enhanced understanding of the inundation and flooding is evident.This article presents an experimental study of the inundation and landslide dam-break flooding over erodible bed in open channels.A set of automatic water-level probes is deployed to record the highly transient stage,and the post-flooding channel bed elevation is measured.New experimental data resources are provided for understanding the processes of landslide-induced flooding and for testing mathematical rivers models.

  12. SOME NEW DATA AND FORMULAS FOR RESISTANCE FLOW IN FLUVIAL OPEN CHANNELS

    Institute of Scientific and Technical Information of China (English)

    YANG Sheng-fa; HU Jiang; LI Dan-xun; WANG Xing-kui; GUO Yakun

    2011-01-01

    Flow resistance in fluvial open channels,especially in steep gravel-bed channels,still presents challenges to researchers and engineers.This article presents some new data from both the flume experiments and field measurements.Data analysis using the divided hydraulic radius approach shows that the relative roughness plays a significant role in the bed form resistance.A new set of formulas that incorporate the relative roughness are proposed.As compared with several existing formulas,the proposed formulas can be used to better estimate the bed form resistance.

  13. Methane emissions from sugarcane vinasse storage and transportation systems: Comparison between open channels and tanks

    Science.gov (United States)

    Oliveira, Bruna Gonçalves; Carvalho, João Luís Nunes; Chagas, Mateus Ferreira; Cerri, Carlos Eduardo Pellegrino; Cerri, Carlos Clemente; Feigl, Brigitte Josefine

    2017-06-01

    Over the last few years the brazilian sugarcane sector has produced an average of 23.5 million liters of ethanol annually. This scale of production generates large amounts of vinasse, which depending on the manner that is disposed, can result significant greenhouse gas emissions. This study aimed to quantify the methane (CH4) emissions associated with the two most widespread systems of vinasse storage and transportation used in Brazil; open channel and those comprising of tanks and pipes. Additionally, a laboratory incubation study was performed with the aim of isolating the effects of vinasse, sediment and the interaction between these factors on CH4 emissions. We observed significant differences in CH4 emissions between the sampling points along the channels during both years of evaluation (2012-2013). In the channel system, around 80% of CH4 emissions were recorded from uncoated sections. Overall, the average CH4 emission intensity was 1.36 kg CO2eq m-3 of vinasse transported in open channels, which was 620 times higher than vinasse transported through a system of tanks and closed pipes. The laboratory incubation corroborated field results, suggesting that vinasse alone does not contribute significant emissions of CH4. Higher CH4 emissions were observed when vinasse and sediment were incubated together. In summary, our findings demonstrate that CH4 emissions originate through the anaerobic decomposition of organic material deposited on the bottom of channels and tanks. The adoption of coated channels as a substitute to uncoated channels offers the potential for an effective and affordable means of reducing CH4 emissions. Ultimately, the modernization of vinasse storage and transportation systems through the adoption of tank and closed pipe systems will provide an effective strategy for mitigating CH4 emissions generated during the disposal phase of the sugarcane ethanol production process.

  14. Novel T-Violation observable open to any pair of decay channels at meson factories

    CERN Document Server

    Bernabeu, Jose; Nebot, Miguel

    2013-01-01

    Quantum Entanglement between the two neutral mesons produced in meson factories has allowed the first indisputable direct observation of Time Reversal Violation in the time evolution of the neutral meson between the two decays. The exceptional meson transitions are directly connected to semileptonic and CP-eigenstate decay channels. The possibility of extending the observable asymmetries to more decay channels confronts the problem of the "orthogonality condition", which can be stated with this tongue-twister: Given a decay channel $f$, Which is the decay channel $f'$ such that the meson state not decaying to $f'$ is orthogonal to the meson state not decaying to $f$? In this paper we propose an alternative $T$-Violation Asymmetry at meson factories which allows its opening to any pair of decay channels. Instead of searching which is the pair of decay channels associated to the $T$-reverse meson transition, we build an asymmetry which tags the initial states of both the Reference and the $T$-reverse meson tran...

  15. Novel T-Violation observable open to any pair of decay channels at meson factories

    Energy Technology Data Exchange (ETDEWEB)

    Bernabéu, José, E-mail: Jose.Bernabeu@uv.es; Botella, Francisco J., E-mail: Francisco.J.Botella@uv.es; Nebot, Miguel, E-mail: Miguel.Nebot@uv.es

    2014-01-20

    Quantum entanglement between the two neutral mesons produced in meson factories has allowed the first indisputable direct observation of Time Reversal Violation in the time evolution of the neutral meson between the two decays. The exceptional meson transitions are directly connected to semileptonic and CP eigenstate decay channels. The possibility of extending the observable asymmetries to more decay channels confronts the problem of the “orthogonality condition”, which can be stated with this tongue-twister: Given a decay channel f, which is the decay channel f{sup ′} such that the meson state not decaying to f{sup ′} is orthogonal to the meson state not decaying to f? In this Letter we propose an alternative T-Violation asymmetry at meson factories which allows its opening to any pair of decay channels. Instead of searching which is the pair of decay channels associated to the T-reverse meson transition, we build an asymmetry which tags the initial states of both the Reference and the T-reverse meson transitions. This observable filters the appropriate final states by means of two measurable survival probabilities. We discuss the methodology to be followed in the analysis of the new observable and the results expected in specific examples.

  16. STIM1 activates CRAC channels through rotation of the pore helix to open a hydrophobic gate

    Science.gov (United States)

    Yamashita, Megumi; Yeung, Priscilla S.-W.; Ing, Christopher E.; McNally, Beth A.; Pomès, Régis; Prakriya, Murali

    2017-02-01

    Store-operated Ca2+ release-activated Ca2+ (CRAC) channels constitute a major pathway for Ca2+ influx and mediate many essential signalling functions in animal cells, yet how they open remains elusive. Here, we investigate the gating mechanism of the human CRAC channel Orai1 by its activator, stromal interacting molecule 1 (STIM1). We find that two rings of pore-lining residues, V102 and F99, work together to form a hydrophobic gate. Mutations of these residues to polar amino acids produce channels with leaky gates that conduct ions in the resting state. STIM1-mediated channel activation occurs through rotation of the pore helix, which displaces the F99 residues away from the pore axis to increase pore hydration, allowing ions to flow through the V102-F99 hydrophobic band. Pore helix rotation by STIM1 also explains the dynamic coupling between CRAC channel gating and ion selectivity. This hydrophobic gating mechanism has implications for CRAC channel function, pharmacology and disease-causing mutations.

  17. Catalyst-like modulation of transition states for CFTR channel opening and closing: New stimulation strategy exploits nonequilibrium gating

    OpenAIRE

    Csanády, László; Töröcsik, Beáta

    2014-01-01

    Cystic fibrosis transmembrane conductance regulator (CFTR) is the chloride ion channel mutated in cystic fibrosis (CF) patients. It is an ATP-binding cassette protein, and its resulting cyclic nonequilibrium gating mechanism sets it apart from most other ion channels. The most common CF mutation (ΔF508) impairs folding of CFTR but also channel gating, reducing open probability (Po). This gating defect must be addressed to effectively treat CF. Combining single-channel and macroscopic current ...

  18. VELOCITY DISTRIBUTION IN TRAPEZOID-SECTION OPEN CHANNEL FLOW WITH A NEW REYNOLDS-STRESS EXPRESSION

    Institute of Scientific and Technical Information of China (English)

    Ma Zheng

    2003-01-01

    By considering that the coherent structure is the main cause of the Reynolds stress, a new Reynolds stress expression was given. On this basis the velocity distribution in the trapezoid-section open channel flow was worked out with the pseudo-spectral method. The results were compared with experimental data and the influence of the ratio of length to width of the cross-section and the lateral inclination on the velocity distribution was analyzed. This model can be used the large flux in rivers and open channes.

  19. Conformational change opening the CFTR chloride channel pore coupled to ATP-dependent gating.

    Science.gov (United States)

    Wang, Wuyang; Linsdell, Paul

    2012-03-01

    Opening and closing of the cystic fibrosis transmembrane conductance regulator (CFTR) chloride channel are controlled by ATP binding and hydrolysis by its nucleotide binding domains (NBDs). This is presumed to control opening of a single "gate" within the permeation pathway, however, the location of such a gate has not been described. We used patch clamp recording to monitor access of cytosolic cysteine reactive reagents to cysteines introduced into different transmembrane (TM) regions in a cysteine-less form of CFTR. The rate of modification of Q98C (TM1) and I344C (TM6) by both [2-sulfonatoethyl] methanethiosulfonate (MTSES) and permeant Au(CN)(2)(-) ions was reduced when ATP concentration was reduced from 1mM to 10μM, and modification by MTSES was accelerated when 2mM pyrophosphate was applied to prevent channel closure. Modification of K95C (TM1) and V345C (TM6) was not affected by these manoeuvres. We also manipulated gating by introducing the mutations K464A (in NBD1) and E1371Q (in NBD2). The rate of modification of Q98C and I344C by both MTSES and Au(CN)(2)(-) was decreased by K464A and increased by E1371Q, whereas modification of K95C and V345C was not affected. These results suggest that access from the cytoplasm to K95 and V345 is similar in open and closed channels. In contrast, modifying ATP-dependent channel gating alters access to Q98 and I344, located further into the pore. We propose that ATP-dependent gating of CFTR is associated with the opening and closing of a gate within the permeation pathway at the level of these pore-lining amino acids.

  20. Polyunsaturated fatty acids are potent openers of human M-channels expressed in Xenopus laevis oocytes

    DEFF Research Database (Denmark)

    Liin, Sara I; Karlsson, Urban; Bentzen, Bo Hjorth

    2016-01-01

    , by shifting the conductance-versus-voltage curve towards more negative voltages (by -7.4 to -11.3 mV by 70 μM). Uncharged docosahexaenoic acid methyl ester and monounsaturated oleic acid did not facilitate opening of the human KV 7.2/3 channel. CONCLUSIONS: These findings suggest that circulating...... acids reduce neuronal excitability. This article is protected by copyright. All rights reserved....

  1. ADVECTION AND DIFFUSION OF POISONOUS GAS CONTAMINANT RELEASED FROM BOTTOM SLUDGE IN OPEN CHANNEL

    Institute of Scientific and Technical Information of China (English)

    WU Zhou-hu

    2004-01-01

    In some cases, poisonous contaminants may be released from bottom sludge in open channels. The equation of advection and diffusion for the related problem was analyzed in this paper. The conditions for the definite solution to the equation were given. The analytic solution of poisonous gas concentration distribution was worked out. The reasonableness of this solution was discussed. The result is also of significance for other similar problems.

  2. The periplasmic loop provides stability to the open state of the CorA magnesium channel.

    Science.gov (United States)

    Palombo, Isolde; Daley, Daniel O; Rapp, Mikaela

    2012-08-10

    Crystal structures of the CorA Mg(2+) channel have suggested that metal binding in the cytoplasmic domain stabilizes the pentamer in a closed conformation. The open "metal free" state of the channel is, however, still structurally uncharacterized. Here, we have attempted to map conformational states of CorA from Thermotoga maritima by determining which residues support the pentameric structure in the presence or absence of Mg(2+). We find that when Mg(2+) is present, the pentamer is stabilized by the putative gating sites (M1/M2) in the cytoplasmic domain. Strikingly however, we find that the conserved and functionally important periplasmic loop is vital for the integrity of the pentamer when Mg(2+) is absent from the M1/M2 sites. Thus, although the periplasmic loops were largely disordered in the x-ray structures of the closed channel, our data suggests a prominent role for the loops in stabilizing the open conformation of the CorA channels.

  3. A specialized molecular motion opens the Hv1 voltage-gated proton channel.

    Science.gov (United States)

    Mony, Laetitia; Berger, Thomas K; Isacoff, Ehud Y

    2015-04-01

    The Hv1 proton channel is unique among voltage-gated channels for containing the pore and gate within its voltage-sensing domain. Pore opening has been proposed to include assembly of the selectivity filter between an arginine (R3) of segment S4 and an aspartate (D1) of segment S1. We determined whether gating involves motion of S1, using Ciona intestinalis Hv1. We found that channel opening is concomitant with solution access to the pore-lining face of S1, from the cytoplasm to deep inside the pore. Voltage- and patch-clamp fluorometry showed that this involves a motion of S1 relative to its surroundings. S1 motion and the S4 motion that precedes it are each influenced by residues on the other helix, thus suggesting a dynamic interaction between S1 and S4. Our findings suggest that the S1 of Hv1 has specialized to function as part of the channel's gate.

  4. Inhibition by acrolein of light-induced stomatal opening through inhibition of inward-rectifying potassium channels in Arabidopsis thaliana.

    Science.gov (United States)

    Islam, Md Moshiul; Ye, Wenxiu; Matsushima, Daiki; Khokon, Md Atiqur Rahman; Munemasa, Shintaro; Nakamura, Yoshimasa; Murata, Yoshiyuki

    2015-01-01

    Acrolein is a reactive α,β-unsaturated aldehyde derived from lipid peroxides, which are produced in plants under a variety of stress. We investigated effects of acrolein on light-induced stomatal opening using Arabidopsis thaliana. Acrolein inhibited light-induced stomatal opening in a dose-dependent manner. Acrolein at 100 μM inhibited plasma membrane inward-rectifying potassium (Kin) channels in guard cells. Acrolein at 100 μM inhibited Kin channel KAT1 expressed in a heterologous system using Xenopus leaves oocytes. These results suggest that acrolein inhibits light-induced stomatal opening through inhibition of Kin channels in guard cells.

  5. Diaphragm opening effects on shock wave formation and acceleration in a rectangular cross section channel

    Science.gov (United States)

    Pakdaman, S. A.; Garcia, M.; Teh, E.; Lincoln, D.; Trivedi, M.; Alves, M.; Johansen, C.

    2016-11-01

    Shock wave formation and acceleration in a high-aspect ratio cross section shock tube were studied experimentally and numerically. The relative importance of geometric effects and diaphragm opening time on shock formation are assessed. The diaphragm opening time was controlled through the use of slit-type (fast opening time) and petal-type (slow opening time) diaphragms. A novel method of fabricating the petal-type diaphragms, which results in a consistent burst pressure and symmetric opening without fragmentation, is presented. High-speed schlieren photography was used to visualize the unsteady propagation of the lead shock wave and trailing gas dynamic structures. Surface-mounted pressure sensors were used to capture the spatial and temporal development of the pressure field. Unsteady Reynolds-Averaged Navier-Stokes simulation predictions using the shear-stress-transport turbulence model are compared to the experimental data. Simulation results are used to explain the presence of high-frequency pressure oscillations observed experimentally in the driver section as well as the cause of the initial acceleration and subsequent rapid decay of shock velocity measured along the top and bottom channel surfaces. A one-dimensional theoretical model predicting the effect of the finite opening time of the diaphragm on the rate of driver depressurization and shock acceleration is proposed. The model removes the large amount of empiricism that accompanies existing models published in the literature. Model accuracy is assessed through comparisons with experiments and simulations. Limitations of and potential improvements in the model are discussed.

  6. Opening of pannexin- and connexin-based channels increases the excitability of nodose ganglion sensory neurons.

    Science.gov (United States)

    Retamal, Mauricio A; Alcayaga, Julio; Verdugo, Christian A; Bultynck, Geert; Leybaert, Luc; Sáez, Pablo J; Fernández, Ricardo; León, Luis E; Sáez, Juan C

    2014-01-01

    Satellite glial cells (SGCs) are the main glia in sensory ganglia. They surround neuronal bodies and form a cap that prevents the formation of chemical or electrical synapses between neighboring neurons. SGCs have been suggested to establish bidirectional paracrine communication with sensory neurons. However, the molecular mechanism involved in this cellular communication is unknown. In the central nervous system (CNS), astrocytes present connexin43 (Cx43) hemichannels and pannexin1 (Panx1) channels, and the opening of these channels allows the release of signal molecules, such as ATP and glutamate. We propose that these channels could play a role in glia-neuron communication in sensory ganglia. Therefore, we studied the expression and function of Cx43 and Panx1 in rat and mouse nodose-petrosal-jugular complexes (NPJcs) using confocal immunofluorescence, molecular and electrophysiological techniques. Cx43 and Panx1 were detected in SGCs and in sensory neurons, respectively. In the rat and mouse, the electrical activity of vagal nerve increased significantly after nodose neurons were exposed to a Ca(2+)/Mg(2+)-free solution, a condition that increases the open probability of Cx hemichannels. This response was partially mimicked by a cell-permeable peptide corresponding to the last 10 amino acids of Cx43 (TAT-Cx43CT). Enhanced neuronal activity was reduced by Cx hemichannel, Panx1 channel and P2X7 receptor blockers. Moreover, the role of Panx1 was confirmed in NPJc, because in those from Panx1 knockout mice showed a reduced increase of neuronal activity induced by Ca(2+)/Mg(2+)-free extracellular conditions. The data suggest that Cx hemichannels and Panx channels serve as paracrine communication pathways between SGCs and neurons by modulating the excitability of sensory neurons.

  7. The effect of potassium channel opener pinacidil on the non-pregnant rat uterus.

    Science.gov (United States)

    Novakovic, Radmila; Milovanovic, Slobodan; Protic, Dragana; Djokic, Jelena; Heinle, Helmut; Gojkovic-Bukarica, Ljiljana

    2007-09-01

    The effects of the K(+) channel opener, pinacidil on the spontaneous rhythmic contractions and contractions provoked by electrical field stimulation (50 Hz) or by oxytocin were investigated in the isolated uterus of the non-pregnant rat in oestrus. Pinacidil produced more potent inhibition of oxytocin-elicited contractions than of spontaneous rhythmic contractions or electrical field stimulation-induced contractions. Glibenclamide, a selective blocker of adenosine triphosphate (ATP)-sensitive K(+) (K(ATP)) channels, antagonized the pinacidil-induced inhibition of contractions elicited by oxytocin in a competitive manner. However, the pinacidil-induced inhibition of electrical field stimulation-elicited contractions and spontaneous rhythmic contractions was antagonized non-competitively by glibenclamide. In the uterine strips pre-contracted with 80 mM K(+), the pinacidil-induced maximal relaxation was not affected. The present data show that pinacidil exhibits potent relaxant properties in the rat non-pregnant uterus in oestrus and therefore should be taken into account as a possible agent for treatment of dysmenorrhoea. Based on glibenclamide affinity, it appears that the inhibitory response to pinacidil involves K(ATP )channels. We need further investigations to explain why the interaction between glibenclamide and pinacidil in this experimental model depends on the nature of contractions. The ability of pinacidil to completely relax the rat non-pregnant uterus pre-contracted with K(+)-rich solution suggests that K(+) channel-independent mechanism(s) also play a part in its relaxant effect.

  8. Orbital Feshbach resonances with a small energy gap between open and closed channels

    Science.gov (United States)

    Cheng, Yanting; Zhang, Ren; Zhang, Peng

    2016-04-01

    Recently, a new type of Feshbach resonance, i.e., orbital Feshbach resonance (OFR), was proposed for the ultracold alkaline-earth-metal-like atoms and was experimentally observed in the ultracold gases of 173Yb atoms. Unlike most of the magnetic Feshbach resonances of ultracold alkali atoms, when the OFR of 173Yb atoms appears, the energy gap between the thresholds of the open channel (OC) and the closed channel (CC) is much smaller than the characteristic energy of the interatomic interaction, i.e., the van der Waals energy. In this paper we study the OFR in systems with a small CC-OC threshold gap. We show that in these systems the OFR can be induced by the coupling between the OC and either an isolated bound state of the CC or the scattering states of the CC. Moreover, we also show that in each case the two-channel Huang-Yang pesudopotential is always applicable for the approximate calculation of the low-energy scattering amplitude. Our results imply that in the two-channel theoretical calculations for these systems it is appropriate to take into account the contributions from the scattering states of the CC.

  9. Characterization of Unruh channel in the context of open quantum systems

    Science.gov (United States)

    Banerjee, Subhashish; Kumar Alok, Ashutosh; Omkar, S.; Srikanth, R.

    2017-02-01

    In this work, we study an important facet of field theories in curved space-time, viz. the Unruh effect, by making use of ideas of statistical mechanics and quantum foundations. Aspects of decoherence and dissipation, natural artifacts of open quantum systems, along with foundational issues such as the trade-off between coherence and mixing as well as various aspects of quantum correlations are investigated in detail for the Unruh effect. We show how the Unruh effect can be quantified mathematically by the Choi matrix approach. We study how environmentally induced decoherence modifies the effect of the Unruh channel. The differing effects of a dissipative or non-dissipative environment are noted. Further, useful parameters characterizing channel performance such as gate and channel fidelity are applied here to the Unruh channel, both with and without external influences. Squeezing, which is known to play an important role in the context of particle creation, is shown to be a useful resource in a number of scenarios.

  10. Opening of pannexin and connexin based-channels increases the excitability of nodose ganglion sensory neurons.

    Directory of Open Access Journals (Sweden)

    Mauricio Antonio Retamal

    2014-06-01

    Full Text Available Satellite glial cells (SGCs are the main glia in sensory ganglia. They surround neuronal bodies and form a cap that prevents the formation of chemical or electrical synapses between neighboring neurons. SGCs have been suggested to establish bidirectional paracrine communication with sensory neurons. However, the molecular mechanism involved in this cellular communication is unknown. In the central nervous system, astrocytes present connexin43 (Cx43 hemichannels and pannexin1 (Panx1 channels, and their opening allows the release of signal molecules, such as ATP and glutamate. We propose that these channels could play a role in the glia-neuron communication in sensory ganglia. Therefore, we studied the expression and function of Cx43 and Panx1 in rat and mouse nodose-petrosal-jugular complex (NPJc by confocal immunofluorescence, molecular and electrophysiological techniques. Cx43 and Panx1 were detected in SGCs and sensory neurons, respectively. In the rat and mouse, the electrical activity of vagal nerve increased significantly after nodose neurons were exposed to Ca2+/ Mg2+-free solution, a condition that increases the open probability of Cx hemichannels. This response was partially mimicked by a cell-permeable peptide corresponding to the last 10 amino acids of Cx43 (TAT-Cx43CT. Enhanced neuronal activity was reduced by Cx hemichannel, Panx1 channel and P2X7 receptor blockers. Moreover, the role of Panx1 was confirmed in NPJc, because Panx1 knockout mouse showed a reduced increase of neuronal activity induced by Ca2+/Mg2+-free extracellular conditions. Data suggest that Cx hemichannels and Panx channels serve as paracrine communication pathways between SGCs and neurons by modulating the excitability of sensory neurons.

  11. Turbulence of non-uniform open channel flows and mean velocity scaling

    Science.gov (United States)

    Stewart, R.; Fox, J.

    2014-12-01

    Turbulence and mean velocity distributions are well studied for uniform flows, however fully turbulent non-uniform open channel flows over rough gravel beds are an understudied class of realistic flows with significant geomorphologic importance. The two-fold objectives of this study are to investigate the effects of flow deceleration on multi-layer turbulence and determine velocity scales that produce self-similar profiles using turbulent boundary layer theory. Turbulence statistics were calculated from data collected using a three-dimensional acoustic Doppler velocimeter in backwater region produced by placing cylindrical obstruction downstream of measuring location. Results indicate inner turbulent processes are set according to shear velocity while outer layer of turbulence is not. Mean streamwise velocity profiles of 101 published datasets including 2211 data points from non-uniform decelerating rivers and laboratory flumes are scaled using inner, outer and 2 mixed methods. Theoretical arguments indicate the outer velocity scale determined from the AIP definition of equilibrium provides a more appropriate scaling for the velocity deficit of non-uniform open channel flows than inner scaling determined from Clauser equilibrium. Scaling results of mean profiles show outer scaling collapses data better than inner scaling. Mixed scaling approaches, which account for upstream conditions and the effect of bed roughness felt throughout the flow, provide a better scaling choice for this class of flows than either inner or outer scales alone. Results of this analysis provide insight on the behavior of turbulence in decelerating fully turbulent open channel flow over a rough gravel bed and provides a scaling useful for predicting velocity distributions.

  12. Analysis of radiometric signal in sedimentating suspension flow in open channel

    Directory of Open Access Journals (Sweden)

    Zych Marcin

    2015-01-01

    Full Text Available The article discusses issues related to the estimation of the sedimentating solid particles average flow velocity in an open channel using radiometric methods. Due to the composition of the compound, which formed water and diatomite, received data have a very weak signal to noise ratio. In the process analysis the known determining of the solid phase transportation time delay the classical cross-correlation function is the most reliable method. The use of advanced frequency analysis based on mutual spectral density function and wavelet transform of recorded signals allows a reduction of the noise contribution.

  13. Analysis of radiometric signal in sedimentating suspension flow in open channel

    Science.gov (United States)

    Zych, Marcin; Hanus, Robert; Petryka, Leszek; Świsulski, Dariusz; Doktor, Marek; Mastej, Wojciech

    2015-05-01

    The article discusses issues related to the estimation of the sedimentating solid particles average flow velocity in an open channel using radiometric methods. Due to the composition of the compound, which formed water and diatomite, received data have a very weak signal to noise ratio. In the process analysis the known determining of the solid phase transportation time delay the classical cross-correlation function is the most reliable method. The use of advanced frequency analysis based on mutual spectral density function and wavelet transform of recorded signals allows a reduction of the noise contribution.

  14. Numerical study of the effects of lamp configuration and reactor wall roughness in an open channel water disinfection UV reactor.

    Science.gov (United States)

    Sultan, Tipu

    2016-07-01

    This article describes the assessment of a numerical procedure used to determine the UV lamp configuration and surface roughness effects on an open channel water disinfection UV reactor. The performance of the open channel water disinfection UV reactor was numerically analyzed on the basis of the performance indictor reduction equivalent dose (RED). The RED values were calculated as a function of the Reynolds number to monitor the performance. The flow through the open channel UV reactor was modelled using a k-ε model with scalable wall function, a discrete ordinate (DO) model for fluence rate calculation, a volume of fluid (VOF) model to locate the unknown free surface, a discrete phase model (DPM) to track the pathogen transport, and a modified law of the wall to incorporate the reactor wall roughness effects. The performance analysis was carried out using commercial CFD software (ANSYS Fluent 15.0). Four case studies were analyzed based on open channel UV reactor type (horizontal and vertical) and lamp configuration (parallel and staggered). The results show that lamp configuration can play an important role in the performance of an open channel water disinfection UV reactor. The effects of the reactor wall roughness were Reynolds number dependent. The proposed methodology is useful for performance optimization of an open channel water disinfection UV reactor.

  15. 4D photogrammetric technique to study free surface water in open channels

    Science.gov (United States)

    Aubé, Damien; Berkaoui, Amine; Vinatier, Fabrice; Bailly, Jean-Stéphane; Belaud, Gilles

    2015-04-01

    Characteristics of three-dimensional surface water are considered as the most valuable information to understand hydrodynamic phenomena in open channel flow. An accurate and coherent description of the free water surface morphology improves the accuracy of hydraulic models which study river processes. However, amongst existing techniques to measure three-dimensional surface, stereo-photogrammetry is clearly the most effective technique to obtain an instantaneous and high accurate 3D free water surface and it's suitable to both flume and field condition. Our study aims at developing this technique in two controlled channels, one in interior with glass borders (length: 6 m, width: 0.3 m and depth: 0.5 m) and one outside with cement borders (length: 13 m, width: 0.7 m and depth: 0.4 m). A system consisting in three NIKON-D3200 cameras, mounted to an adjustable tripod head, which is fixed to an inverted aluminium T-bar with the center camera higher than the two side cameras. Each camera is fitted with a 28 mm lens and cameras are synchronized using a Phottix(R) system. The system was mounted at a downstream position from the channel with an oblique configuration. A series of pictures taken at a 3 s interval during the water weight bearing were reported and analyzed using the Photoscan Pro(R) software for image matching. Validation procedure of the technique was realized using an orthophotography of the lateral border of the interior channel to delimit the line of water surface, and using a video capture of a slide fixed inside the outside channel. A high resolution and dynamic elevation map of the surface water was constructed. Our study give encouraging results, with a good capture of water surface morphology and a limited occlusion issues. The confrontation of the results with the validation dataset highlight limitations that need to be discussed with the audience.

  16. Velocity profile of turbulent sediment-laden flows in open-channels

    Institute of Scientific and Technical Information of China (English)

    Deyu Zhong n; Lei Zhang; Baosheng Wu; Yongqiang Wang

    2015-01-01

    In this paper, a study was carried out on the velocity profile of sediment-laden flows in open channels using a two-phase mixture model for two-phase flows. The governing equations for water-sediment mixtures were derived based on the two-fluid equations for solid–liquid two-phase flows. The drift velocity, a key variable involved in the two-phase mixture equations, was derived from the equation of momentum conservation for the solid phase. The drift velocity shows that the inertia of flow, particle turbulence, and collisions effect contribute to the dispersion of the sediment particles in turbulent flows. Using the two-phase mixture equation, the vertical velocity profile of open channel flows was obtained. Further analysis indicated that the distribution of the velocity over depth of water-sediment mixtures, composed of two different phases, is significantly affected by the turbulence of water-sediment mixtures and the density stratification. However, the velocity distribution is also affected by other factors including collisions between particles and particle turbulence as a basic feature of two-phase flows where interphase interactions inevitably mark their influence on the velocity distribution. Comparisons of this approach with observations for a wide range of experimental conditions are presented in this paper, which show that this approach agrees well with the experiments.

  17. An effective Euler-Lagrange model for suspended sediment transport by open channel flows

    Institute of Scientific and Technical Information of China (English)

    Huabin Shi; Xiping Yu n

    2015-01-01

    An Euler–Lagrange two-phase flow model is developed to study suspended sediment transport by open-channel flows with an Eddy Interaction Model (EIM) applied to consider the effect of fluid turbulence on sediment diffusion. For the continuous phase, the mean fluid velocity, the turbulent kinetic energy and its dissipation rate are directly estimated by well-established empirical formulas. For the dispersed phase, sediment particles are tracked by solving the equation of motion. The EIM is applied to compute the particle fluctuation velocity. Neglecting the effect of particles on flow turbulence as usually suggested for dilute cases in the literature, the Euler–Lagrange model is applied to simulate suspended sediment transport in open channels. Although the numerical results agree well with those by the well-known random walk particle tracking model (RWM) and with the laboratory data for fine sediment cases, it is clearly shown that such an Euler–Lagrange model underestimates the sediment concentration for the medium-sized and coarse sediment cases. To improve the model, a formula is proposed to consider the local fluid turbulence enhancement around a particle due to vortex shedding in the wake. Numerical results of the modified model then agree very well with laboratory data for not only the fine but also the coarse sediment cases.

  18. A study on the stability of laminar open-channel flow over a sandy rippled bed

    Institute of Scientific and Technical Information of China (English)

    BAI; Yuchuan; XU; Haijue

    2005-01-01

    The bed of a river often features some kinds of bedform, such as sand ripples, dunes, and so on. Even if the bed is smooth initially, disturbances arising from the bed or other external sources will cause the laminar flow in an open channel to become unstable as soon as the flow develops, thereby leading to the formation of sand ripples on the bed. In return, the formation of the sand ripples will modify the instability path of the laminar flow passing over them. The wavy character of the bed will induce further instability of the flow, which is essentially different from that on a smooth bed: the neutral curve will move forward and the critical Reynolds number will decrease. The flow is unstable in response to a wider range of the disturbance wave number, or the laminar flow instability can happen more easily. The propagation speed of the sand ripples also affects the flow instability, since the stability of open channel flow over a movable bed is fundamentally different from that on a rigid bed. These instability effects are discussed in detail in this paper.

  19. Prediction of Velocity-Dip-Position at the Central Section of Open Channels using Entropy Theory

    Directory of Open Access Journals (Sweden)

    Snehasis Kundu

    2017-01-01

    Full Text Available An analytical model to predict the velocity-dip-position at the central section of open channels is presented in this study. Unlike the previous studies where empirical or semi-empirical models were suggested, in this study the model is derived by using entropy theory. Using the principle of maximum entropy, the model for dip-position is derived by maximizing the Shannon entropy function after assuming dimensionless dip-position at the central section as a random variable. No estimation of empirical parameter is required for calculating dip-position from the proposed model. The model is able to predict the location of maximum velocity at the central section of an open channel with any aspect ratio. The developed model of velocity-dip-position is tested with experimental data from twenty-two researchers reported in literature for a wide range of aspect ratio. The model is also compared with other existing empirical models. The present model shows good agreement with the observed data and provides least prediction error compared to other models.

  20. 3-D hybrid LES-RANS model for simulation of open-channel T-diversion flows

    Institute of Scientific and Technical Information of China (English)

    Jie ZHOU; Cheng ZENG

    2009-01-01

    The study of flow diversions in open channels plays an important practical role in the design and management of open-channel networks for irrigation or drainage.To accurately predict the mean flow and turbulence characteristics of open-channel dividing flows,a hybrid LES-RANS model,which combines the large eddy simulation (LES) model with the Reynolds-averaged Navier-Stokes (RANS) model,is proposed in the present study.The unsteady RANS model was used to simulate the upstream and downstream regions of a main channel,as well as the downstream region of a branch channel.The LES model was used to simulate the channel diversion region,where turbulent flow characteristics ate complicated.Isotropic velocity fluctuations were added at the inflow interface of the LES region to trigger the generation of resolved turbulence.A method based on the virtual body force is proposed to impose Reynolds-averaged velocity fields near the outlet of the LES region in order to take downstream flow effects computed by the RANS model into account and dissipate the excessive turbulent fluctuations.This hybrid approach saves computational effort and makes it easier to properly specify inlet and outlet boundary conditions.Comparison between computational results and experimental data indicates that this relatively new modeling approach can accurately predict open-channel T-diversion flows.

  1. Mathematical expression of discharge capacity of compound open channels using MARS technique

    Science.gov (United States)

    Parsaie, Abbas; Haghiabi, Amir Hamzeh

    2017-03-01

    In this paper, analytical methods, artificial neural network (ANN) and multivariate adaptive regression splines (MARS) techniques were utilised to estimate the discharge capacity of compound open channels (COC). To this end, related datasets were collected from literature. The results showed that the divided channel method with a coefficient of determination ( R 2) value of 0.76 and root mean square error (RMSE) value of 0.162 has the best performance, among the various analytical methods tested. The performance of applied soft computing models with R 2=0.97 and RMSE = 0.03 was found to be more accurate than analytical approaches. Comparison of MARS with the ANN model, in terms of developed discrepancy ratio (DDR) index, showed that the accuracy of MARS model was better than that of MLP model. Reviewing the structure of the derived MARS model showed that the longitudinal slope of the channel ( S), relative flow depth ( H r ) and relative area ( A r ) have a high impact on modelling and forecasting the discharge capacity of COCs.

  2. FLOW STRUCTURE OF PARTLY VEGETATED OPEN-CHANNEL FLOWS WITH EELGRASS

    Institute of Scientific and Technical Information of China (English)

    WANG Chao; YU Ji-yu; WANG Pei-fang; GUO Peng-cheng

    2009-01-01

    Aquatic vegetation can influence the transport of sediment and contaminants by changing the mean velocity and turbulent flow structure in channels. It is important to understand the hydraulics of the flows over vegetation in order to manage fluvial processes. Experiments in an open-channel flume with natural vegetation were carried out to study the influence of vegetation on the flows. In a half channel with two different densities of vegetation, the flow velocity, Reynolds stresses, and turbulence intensities were measured using an Acoustic Doppler Velocimeter (ADV). We obtained velocity profiles in the lateral direction, Reynolds stresses in the vertical direction, and the flow transition between the vegetated and non-vegetated zones in different flow regimes. The results show that the streamwise velocity in the vegetated zone with higher density is almost entirely blocked. Reynolds stress distribution distinguishes with two different regions: inside and above the vegetation canopies. The turbulence intensities increase with increasing Reynolds number. The coherent vortices dominate the vertical transport of momentum and are advected clockwise between the vegetated zone and non-vegetated zone by secondary currents (a relatively minor flow superimposed on the primary flow, with significantly different speed and direction), generated by the anisotropy of the turbulence.

  3. Steric hindrance between S4 and S5 of the KCNQ1/KCNE1 channel hampers pore opening.

    Science.gov (United States)

    Nakajo, Koichi; Kubo, Yoshihiro

    2014-06-12

    In voltage-gated K(+) channels, membrane depolarization induces an upward movement of the voltage-sensing domains (VSD) that triggers pore opening. KCNQ1 is a voltage-gated K(+) channel and its gating behaviour is substantially modulated by auxiliary subunit KCNE proteins. KCNE1, for example, markedly shifts the voltage dependence of KCNQ1 towards the positive direction and slows down the activation kinetics. Here we identify two phenylalanine residues on KCNQ1, Phe232 on S4 (VSD) and Phe279 on S5 (pore domain) to be responsible for the gating modulation by KCNE1. Phe232 collides with Phe279 during the course of the VSD movement and hinders KCNQ1 channel from opening in the presence of KCNE1. This steric hindrance caused by the bulky amino-acid residues destabilizes the open state and thus shifts the voltage dependence of KCNQ1/KCNE1 channel.

  4. Open channel block of Kv3.1 currents by fluoxetine.

    Science.gov (United States)

    Sung, Min Ji; Ahn, Hye Sook; Hahn, Sang June; Choi, Bok Hee

    2008-01-01

    The action of fluoxetine, a serotonin reuptake inhibitor, on the cloned neuronal rat Kv3.1 channels stably expressed in Chinese hamster ovary cells was investigated using the whole-cell patch-clamp technique. Fluoxetine reduced Kv3.1 whole-cell currents in a reversible, concentration-dependent manner, with an IC(50) value and a Hill coefficient of 13.4 muM and 1.4, respectively. Fluoxetine accelerated the decay rate of inactivation of Kv3.1 currents without modifying the kinetics of current activation. The inhibition increased steeply between 0 and +30 mV, which corresponded with the voltage range for channel opening. In the voltage range positive to +30 mV, inhibition displayed a weak voltage dependence, consistent with an electrical distance delta of 0.38. The binding (k(+1)) and dissociation (k(-1)) rate constants for fluoxetine-induced block of Kv3.1 were 5.7 microM(-1)s(-1) and 53.5 s(-1), respectively. The theoretical K(D) value derived by k(-1)/k(+1) yielded 9.3 microM. Fluoxetine did not affect the ion selectivity of Kv3.1. Fluoxetine slowed the deactivation time course, resulting in a tail crossover phenomenon when the tail currents, recorded in the presence and absence of fluoxetine, were superimposed. Inhibition of Kv3.1 by fluoxetine was use-dependent. The present results suggest that fluoxetine acts on Kv3.1 currents as an open-channel blocker.

  5. Lidocaine stabilizes the open state of CNS voltage-dependent sodium channels.

    Science.gov (United States)

    Castañeda-Castellanos, David R; Nikonorov, Igor; Kallen, Roland G; Recio-Pinto, E

    2002-03-28

    We have previously reported that the lidocaine action is different between CNS and muscle batrachotoxin-modified Na+ channels [Salazar et al., J. Gen. Physiol. 107 (1996) 743-754; Brain Res. 699 (1995) 305-314]. In this study we examined lidocaine action on CNS Na+ currents, to investigate the mechanism of lidocaine action on this channel isoform and to compare it with that proposed for muscle Na+ currents. Na+ currents were measured with the whole cell voltage clamp configuration in stably transfected cells expressing the brain alpha-subunit (type IIA) by itself (alpha-brain) or together with the brain beta(1)-subunit (alphabeta(1)-brain), or the cardiac alpha-subunit (hH1) (alpha-cardiac). Lidocaine (100 microM) produced comparable levels of Na+ current block at positive potentials and of hyperpolarizing shift of the steady-state inactivation curve in alpha-brain and alphabeta(1)-brain Na+ currents. Lidocaine accelerated the rates of activation and inactivation, produced an hyperpolarizing shift in the steady-state activation curve and increased the current magnitude at negative potentials in alpha-brain but not in alphabeta(1)-brain Na+ currents. The lidocaine action in alphabeta(1)-brain resembled that observed in alpha-cardiac Na+ currents. The lidocaine-induced increase in current magnitude at negative potentials and the hyperpolarizing shift in the steady-state activation curve of alpha-brain, are novel effects and suggest that lidocaine treatment does not always lead to current reduction/block when it interacts with Na+ channels. The data are explained by using a modified version of the model proposed by Vedantham and Cannon [J. Gen. Physiol., 113 (1999) 7-16] in which we postulate that the difference in lidocaine action between alpha-brain and alphabeta(1)-brain Na+ currents could be explained by differences in the lidocaine action on the open channel state.

  6. Cystic Fibrosis Transmembrane Conductance Regulator (CFTR): CLOSED AND OPEN STATE CHANNEL MODELS.

    Science.gov (United States)

    Corradi, Valentina; Vergani, Paola; Tieleman, D Peter

    2015-09-18

    The cystic fibrosis transmembrane conductance regulator (CFTR) is a member of the ATP-binding cassette (ABC) transporter superfamily. CFTR controls the flow of anions through the apical membrane of epithelia. Dysfunctional CFTR causes the common lethal genetic disease cystic fibrosis. Transitions between open and closed states of CFTR are regulated by ATP binding and hydrolysis on the cytosolic nucleotide binding domains, which are coupled with the transmembrane (TM) domains forming the pathway for anion permeation. Lack of structural data hampers a global understanding of CFTR and thus the development of "rational" approaches directly targeting defective CFTR. In this work, we explored possible conformational states of the CFTR gating cycle by means of homology modeling. As templates, we used structures of homologous ABC transporters, namely TM(287-288), ABC-B10, McjD, and Sav1866. In the light of published experimental results, structural analysis of the transmembrane cavity suggests that the TM(287-288)-based CFTR model could correspond to a commonly occupied closed state, whereas the McjD-based model could represent an open state. The models capture the important role played by Phe-337 as a filter/gating residue and provide structural information on the conformational transition from closed to open channel.

  7. A model for open-close control of cation channels in the plasma membrane of retinal rod outer segments.

    Science.gov (United States)

    Ichikawa, K

    1989-06-01

    A model for open-close control of cation channels in the plasma membrane of retinal rod outer segments is presented. A channel is assumed to open when 3 cGMP molecules bind to it and close as soon as one of the 3 cGMP molecules is released from it. The calcium ion (divalent cation) is a modulator of the channel conductance. The channel conductance is low when Ca2+ binds to it, while it is high when it is free from Ca2+. From the above assumptions, the reaction scheme of channels with cGMP and Ca2+ is created and the fraction of channels in the open and closed states was calculated using equations for this scheme. The kinetic constants used in the model are estimated from the experimental results of many studies and from the theories. From this estimation, it was found that at the physiological concentrations of intracellular and extracellular Ca2+, almost all channels are bound with Ca2+ and are in the low conductance state. The present model accounts for the reported dose(cGMP)-response(membrane current or conductance) relationship, where the Hill coefficient decreases as the cGMP concentration increases. The dark-level cGMP concentration of 8.13 microM is estimated from the model. This is in good agreement with the reported values. Moreover, the model predicts the invariance of current noise at relatively low Ca2+ concentrations when the cGMP concentration is raised from the dark level to a saturation level. The dynamic properties (opening and closing actions) of the channels in the present model are also in good agreement with the reported observations. The burst mode opening and closing of a channel is predicted by the present model, and it was found that the number of openings in a burst is controlled by the forward and backward rate constants between a channel protein and cGMP molecules. The simulated waveform of a single channel is similar to the reported observations.

  8. The relation of turbulence to diffusion in open-channel flows

    Science.gov (United States)

    Keefer, Thomas N.

    1971-01-01

    This investigation examines the interrelation between turbulent diffusion, dispersion, and the statistical properties of turbulence in an open-channel flow. The experiments were conducted in a 3. 87- foot wide flume over four boundary roughnesses. The results are from studies made of: (1) the influence of turbulence on the vertical and lateral diffusion of plumes of heated water and a neutrally-buoyant salt solution from a point source at the mid-depth of flow; (2) the velocity concentration covariance along the axis of a salt solution plume using a single-electrode conductivity probe and hot-film sensor; (3) lateral and longitudinal surface diffusion measured by dropping polyethylene particles on the water surface; and (4) longitudinal space-time velocity correlation measurements.

  9. EXPERIMENTAL INVESTIGATION ON SOUND SPEED PROPAGATING THROUGH HIGH SPEED AERATED FLOW IN OPEN CHANNEL

    Institute of Scientific and Technical Information of China (English)

    2002-01-01

    An experiment concerning the sound propaga-tion in aerated open channel flow was designed and conductedin a variable slope chute. The acquisition of sound data wasdone by the hydro-phones installed into the bottom wall of thechute. The data were analyzed and processed by the tape re-corder and a 3562A analyzer. The primary experimetal resultsindicated that the sound speed in aerated flow is varied with the air concentration and highly lower than each of the soundspeed in pure water or air. As released by the derived theoryformula, the minimum sound of 24m/s in aerated flow hap-pened when the air concentration achieved to 50%. This resultshows that the compressibility of high speed aerated flowshould be considered when the air concentration is near to50%. A criterion of compressibility of high speed aerated flowwas also giv. En in this paper.

  10. Stability characteristics of the open channel flow above the asymmetrical irregular sand ripples

    Institute of Scientific and Technical Information of China (English)

    2010-01-01

    Sandy bed cannot keep its original smoothness as the flows pass. With the increase of the flow intensity, the bed forms will appear as sand ripples and dune in turn. Among these morphologies, the sand ripple scale is the smallest, which is generally symmetrical when it just appears, but as time goes on, the asymmetrical form gradually develops. Just because of this sand ripples asymmetry, it manifests the influence of the flow on the bed morphology and also the impact on the laminar flow dynamical process, especially the stability characteristics. The stability features of laminar flow on open channels with the asymmetrical sand ripples are discussed, and also the results on the symmetrical sand ripples are compared in detail.

  11. Sprinting performance of two Iberian fish: Luciobarbus bocagei and Pseudochondrostoma duriense in an open channel flume

    Science.gov (United States)

    Sanz-Ronda, Francisco Javier; Ruiz-Legazpi, Jorge; Bravo-Cordoba, Francisco Javier; Makrakis, Sergio; Castro-Santos, Theodore R.

    2015-01-01

    This paper presents sprinting data from Iberian barbel (Luciobarbus bocagei) and northern straight-mouth nase (Pseudochondrostoma duriense), volitionally swimming against high velocity flows (1.5, 2.5 and 3 m s−1) in an open channel flume. Swimming endurance and speed greatly exceeded previously published observations with both species attaining swim speeds >20 body lengths s−1. Flow velocity was the primary variable limiting the distance both species were able to traverse. Barbel swam greater distances than nase at higher flow velocities, with longer individuals attaining greater distances than smaller ones. The results challenge established fish passage guidelines, suggesting that in some cases these species are capable of passing much higher velocities than was previously believed.

  12. Control of Energy Density inside a Disordered Medium by Coupling to Open or Closed Channels

    Science.gov (United States)

    Sarma, Raktim; Yamilov, Alexey G.; Petrenko, Sasha; Bromberg, Yaron; Cao, Hui

    2016-08-01

    We demonstrate experimentally the efficient control of light intensity distribution inside a random scattering system. The adaptive wave front shaping technique is applied to a silicon waveguide containing scattering nanostructures, and the on-chip coupling scheme enables access to all input spatial modes. By selectively coupling the incident light to the open or closed channels of the disordered system, we not only vary the total energy stored inside the system by a factor of 7.4, but also change the energy density distribution from an exponential decay to a linear decay and to a profile peaked near the center. This work provides an on-chip platform for controlling light-matter interactions in turbid media.

  13. EXPERIMENTAL STUDY OF 3-D TURBULENT BEND FLOWS IN OPEN CHANNEL

    Institute of Scientific and Technical Information of China (English)

    LIU Yue-qin; ZHENG Shao-wen; WU Qiang

    2005-01-01

    A generalized bend flow model, treating a 90° single bend and 60° continuous bends, was designed to quantitatively describe 3-D turbulence mechanism of circulating not-fully-developed flow in open channels with bends.The 3-D fluctuating velocities of turbulent flow were measured and analyzed with a 3-D acoustic-Doppler velocimeter.Formula for 3-D turbulent intensity was derived using the dimension analysis approach.Expressions of vertical turbulent-intensity distributions were obtained with the multivariant-regression theory, which agree with experiment data.Distributions of turbulent intensity and turbulent stress were characterized, and their relationships were concluded.In the bend-turbulent-flow core region, longitudinal and lateral turbulent-intensity distributions are coincident with linear distribution, but in near-wall region are coincident with the Gamma distribution.Vertical turbulent intensity distributions are coincident with the Rayleigh distribution.Herein, it is concluded that the bend turbulence is anisotropic.

  14. Adaptation Independent Modulation of Auditory Hair Cell Mechanotransduction Channel Open Probability Implicates a Role for the Lipid Bilayer.

    Science.gov (United States)

    Peng, Anthony W; Gnanasambandam, Radhakrishnan; Sachs, Frederick; Ricci, Anthony J

    2016-03-09

    The auditory system is able to detect movement down to atomic dimensions. This sensitivity comes in part from mechanisms associated with gating of hair cell mechanoelectric transduction (MET) channels. MET channels, located at the tops of stereocilia, are poised to detect tension induced by hair bundle deflection. Hair bundle deflection generates a force by pulling on tip-link proteins connecting adjacent stereocilia. The resting open probability (P(open)) of MET channels determines the linearity and sensitivity to mechanical stimulation. Classically, P(open) is regulated by a calcium-sensitive adaptation mechanism in which lowering extracellular calcium or depolarization increases P(open). Recent data demonstrated that the fast component of adaptation is independent of both calcium and voltage, thus requiring an alternative explanation for the sensitivity of P(open) to calcium and voltage. Using rat auditory hair cells, we characterize a mechanism, separate from fast adaptation, whereby divalent ions interacting with the local lipid environment modulate resting P(open). The specificity of this effect for different divalent ions suggests binding sites that are not an EF-hand or calmodulin model. GsMTx4, a lipid-mediated modifier of cationic stretch-activated channels, eliminated the voltage and divalent sensitivity with minimal effects on adaptation. We hypothesize that the dual mechanisms (lipid modulation and adaptation) extend the dynamic range of the system while maintaining adaptation kinetics at their maximal rates.

  15. A lanthanum chelate possessing an open-channel framework with water nanotubes: properties and desalination.

    Science.gov (United States)

    Chen, Mao-Long; Guo, Yi-Chao; Yang, Fang; Liang, Jin-Xia; Cao, Ze-Xing; Zhou, Zhao-Hui

    2014-04-28

    A new type of thermally stable chelate {La(H2O)4[La(1,3-pdta)(H2O)]3}n · 12nH2O (1) [1,3-H4pdtaCH2[CH2N(CH2CO2H)2]2] with an open-channel shows significant and unusual solvent transport properties and demonstrates a use for low-pressure desalination, which is constructed by cheap and available lanthanum salt and 1,3-propanediaminetetraacetate. The chelate could be converted reversibly to its trihydrate {La(H2O)4[La(1,3-pdta)(H2O)]3}n · 3nH2O (1a), dehydrated product {La(H2O)4[La(1,3-pdta)(H2O)]3}n (1b) and ethanol adduct {La(H2O)4[La(1,3-pdta)(H2O)]3}n · 3nH2O · 3nEtOH (1c). The latter nano-confined ethanol shows a remarkable downfield shift (Δδ = 6.0 ppm) for the methylene group in the solid 13C NMR spectrum compared with that of the free EtOH. Crystal 1 with a regular hexagonal appearance can be used directly for saline water desalination on a small-scale at an ambient temperature, demonstrating a low energy consumption and environmentally friendly method. This is attributed to the 10.0 Å hydrophobic open-channel containing water nanotubes (WNTs, Φ = 4.2 Å). The nano-confined WNTs can be removed at a low temperature (45 °C).

  16. Role of protein sulfation in vasodilation induced by minoxidil sulfate, a K+ channel opener

    Energy Technology Data Exchange (ETDEWEB)

    Meisheri, K.D.; Oleynek, J.J.; Puddington, L. (Cardiovascular Diseases Research, Upjohn Laboratories, Upjohn Company, Kalamazoo, MI (United States))

    1991-09-01

    Evidence from contractile, radioisotope ion flux and electrophysiological studies suggest that minoxidil sulfate (MNXS) acts as a K+ channel opener in vascular smooth muscle. This study was designed to examine possible biochemical mechanisms by which MNXS exerts such an effect. Experiments performed in the isolated rabbit mesenteric artery (RMA) showed that MNXS, 5 microM, but not the parent compound minoxidil, was a potent vasodilator. Whereas the relaxant effects of an another K+ channel opener vasodilator, BRL-34915 (cromakalim), were removed by washing with physiological saline solution, the effects of MNXS persisted after repeated washout attempts. Furthermore, after an initial exposure of segments of intact RMA to (35S) MNXS, greater than 30% of the radiolabel was retained 2 hr after removal of the drug. In contrast, retention of radiolabel was not detected with either (3H)MNXS (label on the piperidine ring of MNXS) or (3H)minoxidil (each less than 3% after a 2-hr washout). These data suggested that the sulfate moiety from MNXS was closely associated with the vascular tissue. To determine if proteins were the acceptors of sulfate from MNXS, intact RMAs were incubated with (35S)MNXS, and then 35S-labeled proteins were separated by sodium dodecyl sulfate-polyacrylamide gel electrophoresis and analyzed by fluorography. Preferential labeling of a 116 kD protein was detected by 2 and 5 min of treatment. A 43 kD protein (resembling actin) also showed significant labeling. A similar profile of 35S-labeled proteins was observed in (35S) MNXS-treated A7r5 rat aortic smooth muscle cells, suggesting that the majority of proteins labeled by (35S)MNXS in intact RMA were components of smooth muscle cells.

  17. Outer region scaling using the freestream velocity for nonuniform open channel flow over gravel

    Science.gov (United States)

    Stewart, Robert L.; Fox, James F.

    2017-06-01

    The theoretical basis for outer region scaling using the freestream velocity for nonuniform open channel flows over gravel is derived and tested for the first time. Owing to the gradual expansion of the flow within the nonuniform case presented, it is hypothesized that the flow can be defined as an equilibrium turbulent boundary layer using the asymptotic invariance principle. The hypothesis is supported using similarity analysis to derive a solution, followed by further testing with experimental datasets. For the latter, 38 newly collected experimental velocity profiles across three nonuniform flows over gravel in a hydraulic flume are tested as are 43 velocity profiles previously published in seven peer-reviewed journal papers that focused on fluid mechanics of nonuniform open channel over gravel. The findings support the nonuniform flows as equilibrium defined by the asymptotic invariance principle, which is reflective of the consistency of the turbulent structure's form and function within the expanding flow. However, roughness impacts the flow structure when comparing across the published experimental datasets. As a secondary objective, we show how previously published mixed scales can be used to assist with freestream velocity scaling of the velocity deficit and thus empirically account for the roughness effects that extend into the outer region of the flow. One broader finding of this study is providing the theoretical context to relax the use of the elusive friction velocity when scaling nonuniform flows in gravel bed rivers; and instead to apply the freestream velocity. A second broader finding highlighted by our results is that scaling of nonuniform flow in gravel bed rivers is still not fully resolved theoretically since mixed scaling relies to some degree on empiricism. As researchers resolve the form and function of macroturbulence in the outer region, we hope to see the closing of this research gap.

  18. Plasmodesmata without callose and calreticulin in higher plants - open channels for fast symplastic transport?

    Directory of Open Access Journals (Sweden)

    Kirill N. Demchenko

    2014-03-01

    Full Text Available Plasmodesmata (PD represent membrane-lined channels that link adjacent plant cells across the cell wall. PD of higher plants contain a central tube of endoplasmic reticulum called desmotubule. Membrane and lumen proteins seem to be able to move through the desmotubule, but most transport processes through PD occur through the cytoplasmic annulus (Brunkard et al., 2013. Calreticulin (CRT, a highly conserved Ca2+-binding protein found in all multi-cellular eukaryotes, predominantly located in the ER, was shown to localize to PD, though not all PD accumulate CRT. In nitrogen fixing actinorhizal root nodules of the Australian tree Casuarina glauca, the primary walls of infected cells containing the microsymbiont become lignified upon infection. TEM analysis of these nodules showed that during the differentiation of infected cells, PD connecting infected cells, and connecting infected and adjacent uninfected cells, were reduced in number as well as diameter (Schubert et al., 2013. In contrast with PD connecting young infected cells, and most PD connecting mature infected and adjacent uninfected cells, PD connecting mature infected cells did not accumulate CRT. Furthermore, as shown here, these PD were not associated with callose, and based on their diameter, they probably had lost their desmotubules. We speculate that either this is a slow path to PD degradation, or that the loss of callose accumulation and presumably also desmotubules leads to the PD becoming open channels and improves metabolite exchange between cells.

  19. Open Tubular Microreactor with Enzyme Functionalized Micro- fluidic Channel for Amperometric Detection of Glucose

    Institute of Scientific and Technical Information of China (English)

    张蕾; 曲平; 盛金; 雷建平; 鞠烷先

    2012-01-01

    A simple and efficient method using enzyme immobilized microfluidic channel as open tubular microreactor was designed for amperometric detection of glucose. The microreactor was composed of a polydimethylsilicone/ glass hybrid device with three reservoirs, a cooling cave and a 6 cm capillary with a sampling fracture as micro-channel. The microchannel was further modified by thermal polymerization, followed by covalently attaching with glucose oxidase. Through fracture sampling and electrochromatography separation, the production via enzymatic reaction was determinated by Pt electrode at the end of capillary. The linear range for the detection of glucose was 0.05--7.5 mmol·L-1 with detection limit of 23μmol.L-1 The inter-and intra-chip reproducibilities for determination of 2.5 mmol-L-1 glucose were 98.5% (n=5) and 96.0% (n=5), respectively. With the advantage of flexible assembly, rapid efficiency, good stability and low-cost, this microreactor provided a potential platform for estab- lishing a portable enzyme-based chemical detection system in practical application.

  20. Hydralazine-induced vasodilation involves opening of high conductance Ca2+-activated K+ channels

    DEFF Research Database (Denmark)

    Bang, Lone; Nielsen-Kudsk, J E; Gruhn, N

    1998-01-01

    The purpose of this study was to investigate whether high conductance Ca2+-activated K+ channels (BK(Ca)) are mediating the vasodilator action of hydralazine. In isolated porcine coronary arteries, hydralazine (1-300 microM), like the K+ channel opener levcromakalim, preferentially relaxed...... contractions induced by K+ (20 mM) compared with K+ (80 mM). In addition, concentration-relaxation curves for hydralazine (pD2 = 5.38 +/- 0.06; Emax = 85.9 +/- 3.6%) were shifted 10-fold to the right by the BK(Ca) blockers tetraethylammonium (1 mM) and iberiotoxin (0.1 microM). In contrast, nimodipine (a Ca2......+-entry blocker), relaxed contractions induced by K+ (20 mM) and K+ (80 mM) equally and nimodipine-induced relaxations were neither antagonized by tetraethylammonium nor by iberiotoxin. In isolated perfused rat hearts, hydralazine (1 microM) increased coronary flow by 28.8 +/- 2.7%. Iberiotoxin (0.1 micro...

  1. Mathematical expression of discharge capacity of compound open channels using MARS technique

    Indian Academy of Sciences (India)

    Abbas Parsaie; Amir Hamzeh Haghiabi

    2017-03-01

    In this paper, analytical methods, artificial neural network (ANN) and multivariate adaptive regression splines (MARS) techniques were utilised to estimate the discharge capacity of compound open channels (COC). To this end, related datasets were collected from literature. The results showed that the dividedchannel method with a coefficient of determination (R2) value of 0.76 and root mean square error (RMSE) value of 0.162 has the best performance, among the various analytical methods tested. The performance of applied soft computing models with R2 = 0.97 and RMSE = 0.03 was found to be more accurate than analytical approaches. Comparison of MARS with the ANN model, in terms of developed discrepancy ratio (DDR) index, showed that the accuracy of MARS model was better than that of MLP model. Reviewing the structure of the derived MARS model showed that the longitudinal slope of the channel (S), relative flow depth (Hr) and relative area (Ar) have a high impact on modelling and forecasting the discharge capacity of COCs.

  2. Neuroprotective effects of a mitochondrial K+-ATP channel opener (diazoxide) are mediated by Bcl-2 expression upregulation

    Institute of Scientific and Technical Information of China (English)

    Majid Katebi; Mansooreh Soleimani; Mehdi Mehdizadeh

    2011-01-01

    Mitochondrial K+-ATP (mito-KATP) channels play an important role in cellular function and survival following ischemic stress. The present results revealed that intervention with diazoxide, a mito-KATP channel opener, led to an increase in Bcl-2 expression in the cerebral cortex of rats subjected to cerebral ischemia reperfusion injury. In addition, the intervention also led to clear improvements in neuronal mitochondrial morphology and consciousness post-injury. Glibenclamide, a mito-KATP channel blocker, exhibited the converse effects. Both diazoxide and glibenclamide exerted dose-dependent effects (in particular, at 18 mg/kg diazoxide and 25 mg/kg glibenclamide). These findings suggest that diazoxide exerts a neuroprotective effect on cerebral ischemia reperfusion injury by opening mito-KATP channels and upregulating Bcl-2 expression.

  3. THREE-DIMENSIONAL LARGE EDDY SIMULATION OF FREE SURFACE TURBULENT FLOW IN OPEN CHANNEL WITHIN SUBMERGED VEGETATION DOMAIN

    Institute of Scientific and Technical Information of China (English)

    Su Xiao-hui; Li C. W.; Chen Bi-hong

    2003-01-01

    A three-dimensional Large Eddy Simulation (LES) has been performed of hydrodynamic behavior of turbulent flow in open channel that the lower part of the domain is occupied by a drag force layer to represent vegetation.One equation model is used to closing the resolvable scale equations.The turbulent characteristic length is parameterized by a k-l model.A phenomenal model is employed to express the performance of vegetation in the open channel.The result reveals that the present model has the capacity of describing three-dimensional structure of large eddy appearing in turbulent flow in open channel with vegetation region and has the capacity of tracing the development of large eddies.

  4. Tentative Study on Performance of Darriues-Type Hydroturbine Operated in Small Open Water Channel

    Science.gov (United States)

    Matsushita, D.; Moriyama, R.; Nakashima, K.; Watanabe, S.; Okuma, K.; Furukawa, A.

    2014-03-01

    The development of small hydropower is one of the realistic and preferable utilizations of renewable energy, but the extra-low head hydropower less than 2 m is almost undeveloped yet for some reasons. The authors have developed several types of Darrieus-type hydro-turbine system, and among them, the Darrieus-turbine with a wear and a nozzle installed upstream of turbine is so far in success to obtain more output power, i.e. more shaft torque, by gathering all water into the turbine. However, there can several cases exist, in which installing the wear covering all the flow channel width is unrealistic. Then, in the present study, the hydraulic performances of Darrieus-type hydro-turbine with the inlet nozzle is investigated, putting alone in a small open channel without upstream wear. In the experiment, the five-bladed Darrieus-type runner with the pitch-circle diameter of 300 mm and the blade span of 300 mm is vertically installed in the open channel with the width of 1,200 mm. The effectiveness of the shape of the inlet nozzle is also examined using two types of two-dimensional symmetric nozzle, the straight line nozzle (SL nozzle) with the converging angle of 45 degrees and the half diameter curved nozzle (HD nozzle) whose radius is a half diameter of runner pitch circle. Inlet and outlet nozzle widths are in common for the both nozzles, which are 540 mm and 240 mm respectively. All the experiments are carried out under the conditions with constant flow rate and downstream water level, and performances are evaluated by measured output torque and the measured head difference between the water levels upstream and downstream of the turbine. As a result, it is found that the output power is remarkably increased by installing the inlet nozzle, and the turbine with SL nozzle produces larger power than that with HD nozzle. However, the peak efficiency is deteriorated in both cases. The speed ratio defined by the rotor speed divided by the downstream water velocity at

  5. Structure of a potentially open state of a proton-activated pentameric ligand-gated ion channel.

    Science.gov (United States)

    Hilf, Ricarda J C; Dutzler, Raimund

    2009-01-01

    The X-ray structure of a pentameric ligand-gated ion channel from Erwinia chrysanthemi (ELIC) has recently provided structural insight into this family of ion channels at high resolution. The structure shows a homo-pentameric protein with a barrel-stave architecture that defines an ion-conduction pore located on the fivefold axis of symmetry. In this structure, the wide aqueous vestibule that is encircled by the extracellular ligand-binding domains of the five subunits narrows to a discontinuous pore that spans the lipid bilayer. The pore is constricted by bulky hydrophobic residues towards the extracellular side, which probably serve as barriers that prevent the diffusion of ions. This interrupted pore architecture in ELIC thus depicts a non-conducting conformation of a pentameric ligand-gated ion channel, the thermodynamically stable state in the absence of bound ligand. As ligand binding promotes pore opening in these ion channels and the specific ligand for ELIC has not yet been identified, we have turned our attention towards a homologous protein from the cyanobacterium Gloebacter violaceus (GLIC). GLIC was shown to form proton-gated channels that are activated by a pH decrease on the extracellular side and that do not desensitize after activation. Both prokaryotic proteins, ELIC and GLIC form ion channels that are selective for cations over anions with poor discrimination among monovalent cations, characteristics that resemble the conduction properties of the cation-selective branch of the family that includes acetylcholine and serotonin receptors. Here we present the X-ray structure of GLIC at 3.1 A resolution. The structure reveals a conformation of the channel that is distinct from ELIC and that probably resembles the open state. In combination, both structures suggest a novel gating mechanism for pentameric ligand-gated ion channels where channel opening proceeds by a change in the tilt of the pore-forming helices.

  6. Large Eddy Simulation of Dilute Sediment Suspension in an Open Channel Flow

    Science.gov (United States)

    Agegnehu, Getnet; Smith, Heather D.

    2012-11-01

    Flow and suspended sediment transport in fully developed turbulent open channel flow has been investigated using Large Eddy Simulation. We used a three-dimensional, non-hydrostatic model, OpenFOAM for this study. Pre-evaluation of three existing turbulence closure schemes is performed by comparing the mean flow and turbulent quantities with the direct numerical simulation results of Moser et al. (1999). It is found that the Dynamic Mixed Smagorinsky model underestimates the wall shear stress compared to the Dynamic Smagorinsky and one equation Eddy Viscosity schemes. Moreover, the Dynamic Smagorinsky scheme gives relatively better results in both the mean and turbulent quantities. The advection-diffusion equation is solved for suspended sediment transport and the effect of sediment roughness is included in the momentum equation based on the rough wall formulation proposed by Cebeci and Bradshaw (1977). A pick up function based on van Rijn (1984) is used to determine the sediment erosion. The settling process is taken into account with a settling velocity appearing in the concentration equation. Sediment and flow quantities are validated by comparing with the experimental data of Lyn (1988). The coupled hydrodynamics results are in good agreement with the experimental data.

  7. Improved Interference-Free Channel Allocation in Coordinated Multiuser Multi-Antenna Open-Access Small Cells

    KAUST Repository

    Radaydeh, Redha

    2016-02-16

    This paper investigates low-complexity joint interference avoidance and desired link improvement for single channel allocation in multiuser multi-antenna access points (APs) for open-access small cells. It is considered that an active user is equipped with an atenna array that can be used to suppress interference sources but not to provide spatial diversity. On the other hand, the operation of APs can be coordinated to meet design requirements, and each of which can unconditionally utilize assigned physical channels. Moreover, each AP is equipped with uncorrelated antennas that can be reused simultaneously to serve many active users. The analysis provides new approaches to exploit physical channels, transmit antennas, and APs to mitigate interference, while providing the best possible link gain to an active user through the most suitable interference-free channel. The event of concurrent service requests placed by active users on a specific interference-free channel is discussed for either interference avoidance through identifying unshared channels or desired link improvement via multiuser scheduling. The applicability of the approaches to balance downlink loads is explained, and practical scenarios due to imperfect identification of interference-free channels and/or scheduled user are thoroughly investigated. The developed results are applicable for any statistical and geometric models of the allocated channel to an active user as well as channel conditions of interference users. They can be used to study various performance measures. Numerical and simulation results are presented to explain some outcomes of this work.

  8. From pan-reactive KV7 channel opener to subtype selective opener/inhibitor by addition of a methyl group

    DEFF Research Database (Denmark)

    Blom, Sigrid Marie; Rottländer, Mario; Kehler, Jan;

    2014-01-01

    The voltage-gated potassium channels of the KV7 family (KV7.1-5) play important roles in controlling neuronal excitability and are therefore attractive targets for treatment of CNS disorders linked to hyperexcitability. One of the main challenges in developing KV7 channel active drugs has been to....... A compound with this profile could hold novel therapeutic potential such as the treatment of both positive and cognitive symptoms in schizophrenia.......The voltage-gated potassium channels of the KV7 family (KV7.1-5) play important roles in controlling neuronal excitability and are therefore attractive targets for treatment of CNS disorders linked to hyperexcitability. One of the main challenges in developing KV7 channel active drugs has been...

  9. Hydrodynamic behavior in the outer shear layer of partly obstructed open channels

    Science.gov (United States)

    Ben Meftah, Mouldi; De Serio, Francesca; Mossa, Michele

    2014-06-01

    Despite the many studies on flow in partly obstructed open channels, this issue remains of fundamental importance in order to better understand the interaction between flow behavior and the canopy structure. In the first part of this study we suggest a new theoretical approach able to model the flow pattern within the shear layer in the unobstructed domain, adjacent to the canopy area. Differently from previous studies, the new analytical solution of flow momentum equations takes into account the transversal velocity component of the flow, which is modelled as a linear function of the streamwise velocity. The proposed theoretical model is validated by different experiments carried out on a physical model of a very large rectangular channel by the research group of the Department of Civil, Environmental, Building Engineering and Chemistry of the Technical University of Bari. An array of vertical, rigid, and circular steel cylinders was partially mounted on the bottom in the central part of the flume, leaving two lateral areas of free flow circulation near the walls. The three-dimensional flow velocity components were measured using a 3D Acoustic Doppler Velocimeter. A comparison of the measured and predicted data of the present study with those obtained in other previous studies, carried out with different canopy density, show a non-dependence of this analytical solution on the array density and the Reynolds number. In the second part of the paper, detailed observations of turbulent intensities and spanwise Reynolds stresses in the unobstructed flow are analyzed and discussed. Differently from some earlier studies, it was observed that the peak of the turbulence intensity and that of the spanwise Reynolds stress are significantly shifted toward the center of the shear layer.

  10. Effects of KRN4884, a novel K+ channel opener, on ionic currents in rabbit femoral arterial myocytes.

    Science.gov (United States)

    Muraki, Katsuhiko; Sasaoka, Akiko; Ohya, Susumu; Watanabe, Minoru; Imaizumi, Yuji

    2003-11-01

    Effects of KRN4884 (5-amino-N-[2-(2-chlorophenyl)ethyl]-N'-cyano-3-pyridinecarboxamidine), a novel K(+) channel opener, on ionic currents were examined in rabbit femoral arterial myocytes (RFAMs). Under whole-cell clamp conditions where cells were superfused with 5.9 mM K(+) bathing solution, KRN4884 elicited an outward current at -30 mV. KRN4884-induced current had a reversal potential of -78 mV and was abolished by application of glibenclamide (glib). KRN4884 was approximately 43 times more potent than levcromakalim in activating an ATP-sensitive K(+) current (I(K-ATP)). On the other hand, KRN4884 affected neither voltage-dependent Ca(2+) nor delayed rectifier K(+) channel currents. In the inside-out patch clamp configuration where cells were superfused with the symmetrical 140 mM K(+) solution, KRN4884 activated 47 pS K(+) channels in the presence of adenosine diphosphate. Similar 47 pS K(+) channels, which were reversibly inhibited by glib, were recorded under outside-out patch conditions. Using RT-PCR analysis, we found that inward rectifier K channel 6.1 (Kir6.1) and sulfonylurea 2B (SUR2B) transcripts were predominantly expressed in rabbit femoral artery. These results indicate that KRN4884 potently activates I(K-ATP) in RFAMs. The KRN4884-sensitive 47 pS K(+) channel activity underlying I(K-ATP) is a vascular type K(ATP) channel consisting of Kir6.1 and SUR2B and has similar characteristics to those of ATP-sensitive K(+) channels activated by K(+) channel openers in other types of smooth muscles.

  11. A specific two-pore domain potassium channel blocker defines the structure of the TASK-1 open pore.

    Science.gov (United States)

    Streit, Anne K; Netter, Michael F; Kempf, Franca; Walecki, Magdalena; Rinné, Susanne; Bollepalli, Murali K; Preisig-Müller, Regina; Renigunta, Vijay; Daut, Jürgen; Baukrowitz, Thomas; Sansom, Mark S P; Stansfeld, Phillip J; Decher, Niels

    2011-04-22

    Two-pore domain potassium (K(2P)) channels play a key role in setting the membrane potential of excitable cells. Despite their role as putative targets for drugs and general anesthetics, little is known about the structure and the drug binding site of K(2P) channels. We describe A1899 as a potent and highly selective blocker of the K(2P) channel TASK-1. As A1899 acts as an open-channel blocker and binds to residues forming the wall of the central cavity, the drug was used to further our understanding of the channel pore. Using alanine mutagenesis screens, we have identified residues in both pore loops, the M2 and M4 segments, and the halothane response element to form the drug binding site of TASK-1. Our experimental data were used to validate a K(2P) open-pore homology model of TASK-1, providing structural insights for future rational design of drugs targeting K(2P) channels.

  12. A Specific Two-pore Domain Potassium Channel Blocker Defines the Structure of the TASK-1 Open Pore*

    Science.gov (United States)

    Streit, Anne K.; Netter, Michael F.; Kempf, Franca; Walecki, Magdalena; Rinné, Susanne; Bollepalli, Murali K.; Preisig-Müller, Regina; Renigunta, Vijay; Daut, Jürgen; Baukrowitz, Thomas; Sansom, Mark S. P.; Stansfeld, Phillip J.; Decher, Niels

    2011-01-01

    Two-pore domain potassium (K2P) channels play a key role in setting the membrane potential of excitable cells. Despite their role as putative targets for drugs and general anesthetics, little is known about the structure and the drug binding site of K2P channels. We describe A1899 as a potent and highly selective blocker of the K2P channel TASK-1. As A1899 acts as an open-channel blocker and binds to residues forming the wall of the central cavity, the drug was used to further our understanding of the channel pore. Using alanine mutagenesis screens, we have identified residues in both pore loops, the M2 and M4 segments, and the halothane response element to form the drug binding site of TASK-1. Our experimental data were used to validate a K2P open-pore homology model of TASK-1, providing structural insights for future rational design of drugs targeting K2P channels. PMID:21362619

  13. Effectiveness Using Circular Fibre Steel Flap Gate As a Control Structure Towards the Hydraulic Characteristics in Open Channel

    Science.gov (United States)

    Adib, M. R. M.; Amirza, A. R. M.; Wardah, T.; Junaidah, A.

    2016-07-01

    Hydraulic control gate structure plays an important role in regulating the flow of water in river, canal or water reservoir. One of the most appropriate structures in term of resolving the problem of flood occured is the construction of circular fibre steel flap gate. Therefore, an experiment has been conducted by using an open channel model at laboratory. In this case, hydraulic jump and backwater were the method to determined the hydraulic characteristics of circular fibre steel flap gate in an open channel model. From the experiment, the opening angle of flap gate can receive discharges with the highest flow rate of 0.035 m3/s with opening angle was 47°. The type of jump that occurs at the slope of 1/200 for a distance of 5.0 m is a standing jump or undulating wave. The height of the backwater can be identified based on the differences of specific force which is specific force before jump, F1 and specific force after jump, F2 from the formation of backwater. Based on the research conducted, the tendency of incident backwater wave occurred was high in every distance of water control location from water inlet is flap slope and the slope of 1/300 which is 0.84 m/s and 0.75 m/s of celerity in open channel model.

  14. A Numerical Study of Non-hydrostatic Shallow Flows in Open Channels

    Science.gov (United States)

    Zerihun, Yebegaeshet T.

    2017-06-01

    The flow field of many practical open channel flow problems, e.g. flow over natural bed forms or hydraulic structures, is characterised by curved streamlines that result in a non-hydrostatic pressure distribution. The essential vertical details of such a flow field need to be accounted for, so as to be able to treat the complex transition between hydrostatic and non-hydrostatic flow regimes. Apparently, the shallow-water equations, which assume a mild longitudinal slope and negligible vertical acceleration, are inappropriate to analyse these types of problems. Besides, most of the current Boussinesq-type models do not consider the effects of turbulence. A novel approach, stemming from the vertical integration of the Reynolds-averaged Navier-Stokes equations, is applied herein to develop a non-hydrostatic model which includes terms accounting for the effective stresses arising from the turbulent characteristics of the flow. The feasibility of the proposed model is examined by simulating flow situations that involve non-hydrostatic pressure and/or nonuniform velocity distributions. The computational results for free-surface and bed pressure profiles exhibit good correlations with experimental data, demonstrating that the present model is capable of simulating the salient features of free-surface flows over sharply-curved overflow structures and rigid-bed dunes.

  15. Experimental investigation of internal structure of open-channel flow with intense transport of sediment

    Directory of Open Access Journals (Sweden)

    Matoušek Václav

    2015-12-01

    Full Text Available Gravity-driven open-channel flows carrying coarse sediment over an erodible granular deposit are studied. Results of laboratory experiments with artificial sediments in a rectangular tilting flume are described and analyzed. Besides integral quantities such as flow rate of mixture, transport concentration of sediment and hydraulic gradient, the experiments include measurements of the one-dimensional velocity distribution across the flow. A vertical profile of the longitudinal component of local velocity is measured across the vertical axis of symmetry of a flume cross section using three independent measuring methods. Due to strong flow stratification, the velocity profile covers regions of very different local concentrations of sediment from virtually zero concentration to the maximum concentration of bed packing. The layered character of the flow results in a velocity distribution which tends to be different in the transport layer above the bed and in the sediment-free region between the top of the transport layer and the water surface. Velocity profiles and integral flow quantities are analyzed with the aim of evaluating the layered structure of the flow and identifying interfaces in the flow with a developed transport layer above the upper plane bed.

  16. Simulation and analysis of ice processes in an artificial open channel

    Institute of Scientific and Technical Information of China (English)

    GUO Xin-lei; YANG Kai-lin; FU Hui; WANG Tao; GUO Yong-xin

    2013-01-01

    The Middle Route Project for South-to-North Water Transfer,which consists of a long artificial open channel and various hydraulic constructions,is a big water conveyance system.A numerical modeling of water conveyance in the ice period for such large-scale and long distance water transfer project is developed based on the integration of a river ice model and an unsteady flow model with complex inner boundaries.A simplified method to obtain the same flow discharge in the upstream and downstream of the structure by neglecting the storage effect is proposed for dealing with the inner boundaries.According to the measured and design data in winter-spring period,the whole ice process,which includes the formation of the ice cover,its development,the melting and the breaking up as well as the ice-water dynamic response during the gate operation for the middle route,is simulated.The ice characteristics and the water conveyance capacity are both analyzed and thus the hydraulic control conditions for a safety regulation are obtained.At last,the uncertainties of some parameters related to the ice model are discussed.

  17. One-dimensional velocity profiles in open-channel flow with intense transport of coarse sediment

    Directory of Open Access Journals (Sweden)

    Zrostlík Štěpán

    2015-01-01

    Full Text Available The paper deals with laboratory experiments in open-channel flows with intense transport of model sediment (coarse plastic particles in our new tilting flume. The major objectives of the paper are: 1. to discuss applied measuring methods, 2. to analyze measured velocity profiles. Ad 1. A profile of the longitudinal component of local velocity was measured across the vertical axis of symmetry of a flume cross section using three independent measuring methods (Prandtl tube, Ultrasonic Velocity Profiler, Acoustic Doppler Velocity Profiler. Due to strong stratification of the flow in the flume, parts of the profile are measured in regions of very different local concentrations of sediment (from virtually zero concentration to the maximum concentration of bed packing. This makes measurements complicated, particularly for ultrasonic measuring techniques. Profiles measured using the different techniques are evaluated and mutually compared. Ad 2. The layered character of the flow causes that shapes of velocity profiles tend to be different in the transport layer (rich on transported particles above the bed and in the solids-free region between the top of the transport layer and the water surface. Shapes of the profiles are analyzed. Particular attention is paid to the logarithmic profile in the solids-free region of the flow cross section. The profile can be handled using the law of the hydraulically-rough wall. In the law, the eroded top of the bed with the transport layer is supposed to be the rough boundary and appropriate values are sought for its variables.

  18. Quantification of the bed load effects on turbulent open-channel flows

    Science.gov (United States)

    Liu, Detian; Liu, Xiaofeng; Fu, Xudong; Wang, Guangqian

    2016-04-01

    With a computational model combining large eddy simulation and a discrete element model, detailed quantification of the bed load effects on turbulent open-channel flows is presented. The objective is the revelation of bed load particle impact on the mean flow properties and coherent structures. Two comparative numerical experiments with mobile and immobile beds are conducted. Mean properties (e.g., velocity and Reynolds stress profiles) show good agreement with experimental data. Comparing the mobile and immobile cases, the effective bed position is nearly the same, whereas the equivalent sand roughness is changed. The flow experiences higher bottom shear stress over immobile bed. To quantify impact on turbulent structures, a revised quadrant analysis is performed to calculate four key parameters of ejection and sweep events (duration, maximum shear stress, transported momentum, and period). Results show that the ejection and sweep events have comparable importance in the outer region. However, sweep becomes dominant in the near-wall region. The motion of particles enhances the sweep dominance by breaking up the ejection structures and decreasing their occurrence ratio. The results also suggest that the ejection events are easier to be influenced by the particle motions because they originate from the near-wall region. The duration, maximum shear stress, and transported momentum decrease close to the bed. The period remains relatively constant in the outer region but decreases near the bed. Visualization of the coherent structure reveals that the instantaneous particle motion has strong correlation with the bursting cycle events.

  19. Antispasmodic activity of Symplocos paniculata is mediated through opening of ATP-dependent K+ channel

    Directory of Open Access Journals (Sweden)

    Khalid Hussain Janbaz

    2016-06-01

    Full Text Available Symplocos paniculata is a medicinal plant used by native healers to manage gastrointestinal ailments. The crude methanolic extract of S. paniculata was screened pharmacologically both in vitro and in vivo for the validation of its therapeutic potential. It suppressed the spontaneous activity of isolated rabbit jejunum preparations and also caused inhibition of the low K+ (20 mM- induced spastic contractions in isolated rabbit jejunum preparations in a manner comparable to cromakalim. The relaxant effect was found to be blocked following glibenclamide exposure of the isolated tissue preparations similar to cromakalim, suggesting that observed response was likely to be mediated through opening of ATP dependent K+ channels. Following oral administration to mice provided protection against castor oil-induced diarrhea in a manner similar to loperamide. The plant material was found safe in toxicity study up to oral dose of 8 g/kg in mice. Hence, present study provides a scientific basis for the vernacular use of S. paniculata in gastro-intestinal system.

  20. DNS-DEM of Suspended Sediment Particles in an Open Channel Flow

    Science.gov (United States)

    Pakseresht, Pedram; Apte, Sourabh; Finn, Justin

    2016-11-01

    DNS with point-particle based discrete element model (DEM) is used to study particle-turbulence interactions in an open channel flow at Reτ of 710, corresponding to the experimental observations of Righetti & Romano. Large particles of diameter 200 microns (10 in wall units) with volume loading on the order of 10-3 are simulated using four-way coupling with closure models for drag, added mass, lift, pressure, and inter-particle collision forces. The point-particle model is able to accurately capture the effect of particles on the fluid flow in the outer layer. However, the particle is significantly larger than the wall-normal grid in the near-wall region, but slightly smaller than the axial and longitudinal grid resolutions. The point-particle model fails to capture the interactions in the near-wall region. In order to improve the near-wall predictions, particles are represented by Lagrangian material points which are used to perform interpolations from the grid to the Lagrangian points and to distribute the two-way coupling force to the Eulerian grid. Predictions using this approach is compared with the experimental data to evaluate its effectiveness. NSF project #1133363, Sediment-Bed-Turbulence Coupling in Oscillatory Flows.

  1. The Effect of Confluence Angle on the Flow Pattern at a Rectangular Open-Channel

    Directory of Open Access Journals (Sweden)

    F. Rooniyan

    2014-02-01

    Full Text Available Flow connection in channels is a phenomenon which frequently happens in rivers, water and drainage channels and urban sewage systems. The phenomenon appears to be more complex in rivers than in channels, especially at the y-junction bed joint that causes erosion and sedimentation at some areas resulting to morphological changes. Flow behavior at the channel junction area depends on variables such as channel geometry, discharge ratio, tributary width and y-junction connection angle of the channel, bed level changes at the bed joint, flow characteristic at the bed joint upstream and flow Froude number in different sections. In this research, fluent numerical model and junction angles of 30o, 45o & 60o are used to analyze and evaluate the effect of channel junction geometry on the flow pattern and the flow separation zone dimensions in different ratios of flow discharge (upstream channel discharge to total discharge of the flow. Results for two ratios of flow discharge are represented. Results are in agreement with earlier studies and it is shown that the change of the channel crossing angle affects the flow pattern in the main channel and also that the dimensions of the created separation zone in the main channel become larger when the crossing angle increases. This phenomenon can also be observed when the flow discharge ratio is lower. Analysis showed that the least dimension of the separation zone will be at the crossing angle of 45o .

  2. Catalyst-like modulation of transition states for CFTR channel opening and closing: new stimulation strategy exploits nonequilibrium gating.

    Science.gov (United States)

    Csanády, László; Töröcsik, Beáta

    2014-02-01

    Cystic fibrosis transmembrane conductance regulator (CFTR) is the chloride ion channel mutated in cystic fibrosis (CF) patients. It is an ATP-binding cassette protein, and its resulting cyclic nonequilibrium gating mechanism sets it apart from most other ion channels. The most common CF mutation (ΔF508) impairs folding of CFTR but also channel gating, reducing open probability (Po). This gating defect must be addressed to effectively treat CF. Combining single-channel and macroscopic current measurements in inside-out patches, we show here that the two effects of 5-nitro-2-(3-phenylpropylamino)benzoate (NPPB) on CFTR, pore block and gating stimulation, are independent, suggesting action at distinct sites. Furthermore, detailed kinetic analysis revealed that NPPB potently increases Po, also of ΔF508 CFTR, by affecting the stability of gating transition states. This finding is unexpected, because for most ion channels, which gate at equilibrium, altering transition-state stabilities has no effect on Po; rather, agonists usually stimulate by stabilizing open states. Our results highlight how for CFTR, because of its unique cyclic mechanism, gating transition states determine Po and offer strategic targets for potentiator compounds to achieve maximal efficacy.

  3. Loop diuretics are open-channel blockers of the cystic fibrosis transmembrane conductance regulator with distinct kinetics

    Science.gov (United States)

    Ju, Min; Scott-Ward, Toby S; Liu, Jia; Khuituan, Pissared; Li, Hongyu; Cai, Zhiwei; Husbands, Stephen M; Sheppard, David N

    2014-01-01

    BACKGROUND AND PURPOSE Loop diuretics are widely used to inhibit the Na+, K+, 2Cl− co-transporter, but they also inhibit the cystic fibrosis transmembrane conductance regulator (CFTR) Cl− channel. Here, we investigated the mechanism of CFTR inhibition by loop diuretics and explored the effects of chemical structure on channel blockade. EXPERIMENTAL APPROACH Using the patch-clamp technique, we tested the effects of bumetanide, furosemide, piretanide and xipamide on recombinant wild-type human CFTR. KEY RESULTS When added to the intracellular solution, loop diuretics inhibited CFTR Cl− currents with potency approaching that of glibenclamide, a widely used CFTR blocker with some structural similarity to loop diuretics. To begin to study the kinetics of channel blockade, we examined the time dependence of macroscopic current inhibition following a hyperpolarizing voltage step. Like glibenclamide, piretanide blockade of CFTR was time and voltage dependent. By contrast, furosemide blockade was voltage dependent, but time independent. Consistent with these data, furosemide blocked individual CFTR Cl− channels with ‘very fast’ speed and drug-induced blocking events overlapped brief channel closures, whereas piretanide inhibited individual channels with ‘intermediate’ speed and drug-induced blocking events were distinct from channel closures. CONCLUSIONS AND IMPLICATIONS Structure–activity analysis of the loop diuretics suggests that the phenoxy group present in bumetanide and piretanide, but absent in furosemide and xipamide, might account for the different kinetics of channel block by locking loop diuretics within the intracellular vestibule of the CFTR pore. We conclude that loop diuretics are open-channel blockers of CFTR with distinct kinetics, affected by molecular dimensions and lipophilicity. PMID:24117047

  4. Calcium-activated potassium channels mediated blood-brain tumor barrier opening in a rat metastatic brain tumor model

    Directory of Open Access Journals (Sweden)

    Ong John M

    2007-03-01

    Full Text Available Abstract Background The blood-brain tumor barrier (BTB impedes the delivery of therapeutic agents to brain tumors. While adequate delivery of drugs occurs in systemic tumors, the BTB limits delivery of anti-tumor agents into brain metastases. Results In this study, we examined the function and regulation of calcium-activated potassium (KCa channels in a rat metastatic brain tumor model. We showed that intravenous infusion of NS1619, a KCa channel agonist, and bradykinin selectively enhanced BTB permeability in brain tumors, but not in normal brain. Iberiotoxin, a KCa channel antagonist, significantly attenuated NS1619-induced BTB permeability increase. We found KCa channels and bradykinin type 2 receptors (B2R expressed in cultured human metastatic brain tumor cells (CRL-5904, non-small cell lung cancer, metastasized to brain, human brain microvessel endothelial cells (HBMEC and human lung cancer brain metastasis tissues. Potentiometric assays demonstrated the activity of KCa channels in metastatic brain tumor cells and HBMEC. Furthermore, we detected higher expression of KCa channels in the metastatic brain tumor tissue and tumor capillary endothelia as compared to normal brain tissue. Co-culture of metastatic brain tumor cells and brain microvessel endothelial cells showed an upregulation of KCa channels, which may contribute to the overexpression of KCa channels in tumor microvessels and selectivity of BTB opening. Conclusion These findings suggest that KCa channels in metastatic brain tumors may serve as an effective target for biochemical modulation of BTB permeability to enhance selective delivery of chemotherapeutic drugs to metastatic brain tumors.

  5. Surface velocity divergence model of air/water interfacial gas transfer in open-channel flows

    Science.gov (United States)

    Sanjou, M.; Nezu, I.; Okamoto, T.

    2017-04-01

    Air/water interfacial gas transfer through a free surface plays a significant role in preserving and restoring water quality in creeks and rivers. However, direct measurements of the gas transfer velocity and reaeration coefficient are still difficult, and therefore a reliable prediction model needs to be developed. Varying systematically the bulk-mean velocity and water depth, laboratory flume experiments were conducted and we measured surface velocities and dissolved oxygen (DO) concentrations in open-channel flows to reveal the relationship between DO transfer velocity and surface divergence (SD). Horizontal particle image velocimetry measurements provide the time-variations of surface velocity divergence. Positive and negative regions of surface velocity divergence are transferred downstream in time, as occurs in boil phenomenon on natural river free-surfaces. The result implies that interfacial gas transfer is related to bottom-situated turbulence motion and vertical mass transfer. The original SD model focuses mainly on small-scale viscous motion, and this model strongly depends on the water depth. Therefore, we modify the SD model theoretically to accommodate the effects of the water depth on gas transfer, introducing a non-dimensional parameter that includes contributions of depth-scale large-vortex motion, such as secondary currents, to surface renewal events related to DO transport. The modified SD model proved effective and reasonable without any dependence on the bulk mean velocity and water depth, and has a larger coefficient of determination than the original SD model. Furthermore, modeling of friction velocity with the Reynolds number improves the practicality of a new formula that is expected to be used in studies of natural rivers.

  6. Relationship between ecosystem respiration and aeration constant in open channel dissolved oxygen analysis

    Science.gov (United States)

    Parker, S. J.; Butler, A. P.; Heppell, C. M.

    2015-12-01

    Using the open channel diel method of Odum (1956) and the night-time regression method (Hornberger and Kelly, 1985), we analysed a time series of dissolved oxygen (DO) in two slow flowing streams for a two month period in summer 2014 and obtained values for ecosystem respiration and the aeration constant for each day in the period. We then used the standard dissolved oxygen lumped model to generate a DO time series behaviour for one of those rivers selecting respiration and aeration parameters by randomly sampling from the values obtained from the data. Two synthetic time series were created, one where respiration and aeration were independent of temperature and a second where respiration and aeration were affected by temperature according to the modified Arrhenius relationship. With these two synthetic time series, we again recovered the respiration and aeration input parameters using the night- time regression method and compared those recovered parameters with the input parameters. Because the simulations were conducted with parameters that were known, the values recovered using the night-time regression method (i.e post-simulation) could be compared with parameters driving the simulation (i.e. pre-simulation input values). For values based on data, we found a strong correlation between the aeration constant and respiration for both rivers. For the synthetic time series, no such correlation was found, either with the temperature independent or temperature dependent time series. The night-time regression method also recovered perfectly the input parameters, so the correlation was not brought about as a result of implementing the method itself. We are currently investigating the cause of the correlation.

  7. Experimental study of depth-limited open-channel flows over a gravel bed

    Institute of Scientific and Technical Information of China (English)

    Cheng Zeng; Chiwai Li; Hongwu Tang; Lingling Wang; Jingqiao Mao

    2015-01-01

    abstract Laboratory experiments of depth-limited open-channel flows over a gravel bed were conducted in the study. Two gravel patches with identical individual element size and different lengths (3.81 m and 7.5 m) were tested. The depth-limited uniform flow regime with relative submergence Sr ( ¼ D/ks) ranging from 2.68 to 5.94 was produced by adjusting the tailgate weir. The velocity profiles were measured by using both an ultra-sound velocity profiler (UVP) and an acoustic Doppler velocimeter (ADV). The conventional methods used to determine the zero-plane displacement and estimate the bed shear velocity were then reviewed and compared. The measured double-averaged (DA) velocity profiles were found to fit well with the log law and defect law with a non-universal Karman constantκ.κ-value remains nearly constant and in the range from 0.2 to 0.3 for the long patch (LP) cases andκ-values are scattered within a wider range from 0.3 to 0.5 for the short patch (SP) cases. While the Br-value in log law remains constant and equal to 8.5 for LP cases, the Br-value was found to decrease with the increase of the dimensionless roughness height ksþ for SP cases. The streamwise turbulence intensity distributions were found to be independent on the patch length and agree well with the available experimental data in the intermediate region and wall region. The Manning resistance coefficient and Darcy–Weisbach friction factor were analyzed. Theκ-value decreases to 0.22 for the fitting of the logarithmic flow resistance law under small relative submergence. The value of the integration constant Ar in the logarithmic law falls within the normal range between 3.25 and 6.25.

  8. Thermal stability of purified and reconstituted CFTR in a locked open channel conformation.

    Science.gov (United States)

    Aleksandrov, Luba A; Jensen, Timothy J; Cui, Liying; Kousouros, Joseph N; He, Lihua; Aleksandrov, Andrei A; Riordan, John R

    2015-12-01

    CFTR is unique among ABC transporters as the only one functioning as an ion channel and from a human health perspective because mutations in its gene cause cystic fibrosis. Although considerable advances have been made towards understanding CFTR's mechanism of action and the impact of mutations, the lack of a high-resolution 3D structure has hindered progress. The large multi-domain membrane glycoprotein is normally present at low copy number and when over expressed at high levels it aggregates strongly, limiting the production of stable mono-disperse preparations. While the reasons for the strong self-association are not fully understood, its relatively low thermal stability seems likely to be one. The major CF causing mutation, ΔF508, renders the protein very thermally unstable and therefore a great deal of attention has been paid to this property of CFTR. Multiple second site mutations of CFTR in NBD1 where F508 normally resides and small molecule binders of the domain increase the thermal stability of the mutant. These manipulations also stabilize the wild-type protein. Here we have applied ΔF508-stabilizing changes and other modifications to generate wild-type constructs that express at much higher levels in scaled-up suspension cultures of mammalian cells. After purification and reconstitution into liposomes these proteins are active in a locked-open conformation at temperatures as high as 50 °C and remain monodisperse at 4 °C in detergent or lipid for at least a week. The availability of adequate amounts of these and related stable active preparations of homogeneous CFTR will enable stalled structural and ligand binding studies to proceed.

  9. Error control and channel access technique of the computer-based truck dispatching system in the open-pit mine

    Energy Technology Data Exchange (ETDEWEB)

    Zhang, G.; Wang, Y.; Huang, Z. [China University of Mining and Technology (China)

    1994-06-01

    The disposition of hardware and software of a computer-based truck dispatching system for open-pit mine are described in the paper. The advantages of random channel access technique of the CSMA/CA/CD of the SWARQ error control and of encoding of constant proportion code were proved by theoretical analysis. The block diagram of the main communication software is given. 3 refs., 4 figs.

  10. Groundwater flow into underground openings in fractured crystalline rocks: an interpretation based on long channels

    Science.gov (United States)

    Black, John H.; Woodman, Nicholas D.; Barker, John A.

    2016-12-01

    Rethinking an old tracer experiment in fractured crystalline rock suggests a concept of groundwater flow in sparse networks of long channels that is supported by results from an innovative lattice network model. The model, HyperConv, can vary the mean length of `strings' of connected bonds, and the gaps between them, using two independent probability functions. It is found that networks of long channels are able to percolate at lower values of (bond) density than networks of short channels. A general relationship between mean channel length, mean gap length and probability of percolation has been developed which incorporates the well-established result for `classical' lattice network models as a special case. Using parameters appropriate to a 4-m diameter drift located 360 m below surface at Stripa Mine Underground Research Laboratory in Sweden, HyperConv is able to reproduce values of apparent positive skin, as observed in the so-called Macropermeability Experiment, but only when mean channel length exceeds 10 m. This implies that such channel systems must cross many fracture intersections without bifurcating. A general relationship in terms of flow dimension is suggested. Some initial investigations using HyperConv show that the commonly observed feature, `compartmentalization', only occurs when channel density is just above the percolation threshold. Such compartments have been observed at Kamaishi Experimental Mine (Japan) implying a sparse flow network. It is suggested that compartments and skin are observable in the field, indicate sparse channel systems, and could form part of site characterization for deep nuclear waste repositories.

  11. Assessing and Testing Hydrokinetic Turbine Performance and Effects on Open Channel Hydrodynamics: An Irrigation Canal Case Study.

    Energy Technology Data Exchange (ETDEWEB)

    Gunawan, Budi [Sandia National Lab. (SNL-NM), Albuquerque, NM (United States); Neary, Vincent Sinclair [Sandia National Lab. (SNL-NM), Albuquerque, NM (United States); Mortensen, Josh [United States Bureau of Reclamation, Denver, CO (United States); Roberts, Jesse D. [Sandia National Lab. (SNL-NM), Albuquerque, NM (United States)

    2017-05-01

    Hydrokinetic energy from flowing water in open channels has the potential to support local electricity needs with lower regulatory or capital investment than impounding water with more conventional means. MOU agencies involved in federal hydropower development have identified the need to better understand the opportunities for hydrokinetic (HK) energy development within existing canal systems that may already have integrated hydropower plants. This document provides an overview of the main considerations, tools, and assessment methods, for implementing field tests in an open-channel water system to characterize current energy converter (CEC) device performance and hydrodynamic effects. It describes open channel processes relevant to their HK site and perform pertinent analyses to guide siting and CEC layout design, with the goal of streamlining the evaluation process and reducing the risk of interfering with existing uses of the site. This document outlines key site parameters of interest and effective tools and methods for measurement and analysis with examples drawn from the Roza Main Canal, in Yakima, WA to illustrate a site application.

  12. Hydraulics of combining flow in a right-angled compound open channel junction

    Indian Academy of Sciences (India)

    Sushant K Biswal; Pranab Mohapatra; K Muralidhar

    2016-01-01

    Although combining flows are common in natural streams, no comprehensive experimental data has been compiled to characterize the three-dimensional flow field within the compound channel confluence. The present study examines the time-averaged flow structure at confluence over a rigid bed. Current knowledge of channel confluence, based on laboratory observation indicates that cross flow interactions exert a significant influence on confluence events. Secondary current and turbulent stresses are reproduced well by the hydraulic model and found greater in the interface region as relative flow ratio decreases. Velocity fields in combining flow region arising from varying discharge ratios are presented. A zone of depression in surface elevation in compound channel junction is observed as well. The flow field in compound channel is seen to be moderately different from that of simple channel junction. This study contributes to a better knowledge of hydraulic key processes into fundamental aspect of combining flow dynamics.

  13. Fine sediment dynamics in unsteady open-channel flow studied with acoustic and optical systems

    Science.gov (United States)

    Bagherimiyab, Fereshteh; Lemmin, Ulrich

    2012-09-01

    In order to simulate fine sediment dynamics over an armored bed in a tidal river, unsteady accelerating, then steady open-channel flow over a movable (but not moving) coarse gravel bed (D50=5.5 mm) was studied. A layer of fine sediment (D50=120 μm) was placed on the coarse gravel bed. The thickness of the fine sediment layer on the gravel bed was varied between 4 and 6 mm, but it was found that the thickness of the layer had no effect on the results. Quasi-instantaneous profiles of velocity and sediment concentration were taken simultaneously and co-located. An Acoustic Doppler Velocity Profiler (ADVP) was combined with Particle Tracking Velocimetry (PTV) for suspended sediment particle tracking. Measurements resolved turbulence scales. During the final phase of the accelerating flow range, fine sediment suspension from the bed started in packets and rapidly created a ripple pattern that remained nearly stationary. Thereafter, vortex shedding produced most of the sediment suspension into the water column in the form of events or packets, making suspension intermittent. Simultaneously, sediment particles rolled along the bed following the ripple structure, thus slowly advancing the ripple pattern in the direction of the flow without altering ripple geometry. Fine sediment particles and hydrogen bubbles were used individually or combined as flow tracers in the acoustic measurements. When used individually, hydrogen bubbles provided full depth flow and backscattering information, whereas sediment particles traced only the lower layers of the flow, indicating sediment suspension. When both tracers were combined, hydrogen bubbles could only be distinguished from sediment particles when results at two different acoustic carrier frequencies were compared. The intermittency was observed in the backscattering of the acoustic system. The event structure in fine sediment suspension is seen by the PTV method. PTV velocity vectors varied in speed and orientation, were

  14. PIP2 controls voltage-sensor movement and pore opening of Kv channels through the S4-S5 linker.

    Science.gov (United States)

    Rodriguez-Menchaca, Aldo A; Adney, Scott K; Tang, Qiong-Yao; Meng, Xuan-Yu; Rosenhouse-Dantsker, Avia; Cui, Meng; Logothetis, Diomedes E

    2012-09-04

    Voltage-gated K(+) (Kv) channels couple the movement of a voltage sensor to the channel gate(s) via a helical intracellular region, the S4-S5 linker. A number of studies link voltage sensitivity to interactions of S4 charges with membrane phospholipids in the outer leaflet of the bilayer. Although the phospholipid phosphatidylinositol-4,5-bisphosphate (PIP(2)) in the inner membrane leaflet has emerged as a universal activator of ion channels, no such role has been established for mammalian Kv channels. Here we show that PIP(2) depletion induced two kinetically distinct effects on Kv channels: an increase in voltage sensitivity and a concomitant decrease in current amplitude. These effects are reversible, exhibiting distinct molecular determinants and sensitivities to PIP(2). Gating current measurements revealed that PIP(2) constrains the movement of the sensor through interactions with the S4-S5 linker. Thus, PIP(2) controls both the movement of the voltage sensor and the stability of the open pore through interactions with the linker that connects them.

  15. Experimental studies of vertical mixing patterns in open channel flow generated by two delta wings side-by-side

    Science.gov (United States)

    Vaughan, Garrett

    Open channel raceway bioreactors are a low-cost system used to grow algae for biofuel production. Microalgae have many promises when it comes to renewable energy applications, but many economic hurdles must be overcome to achieve an economic fuel source that is competitive with petroleum-based fuels. One way to make algae more competitive is to improve vertical mixing in algae raceway bioreactors. Previous studies show that mixing may be increased by the addition of mechanisms such as airfoils. The circulation created helps move the algae from the bottom to top surface for necessary photosynthetic exchange. This improvement in light utilization allowed a certain study to achieve 2.2-2.4 times the amount of biomass relative to bioreactors without airfoils. This idea of increasing mixing in open channel raceways has been the focus of the Utah State University (USU) raceway hydraulics group. Computational Fluid Dynamics (CFD), Acoustic Doppler Velocimetry (ADV), and Particle Image Velocimetry (PIV) are all methods used at USU to computationally and experimentally quantify mixing in an open channel raceway. They have also been used to observe the effects of using delta wings (DW) in increasing vertical mixing in the raceway. These efforts showed great potential in the DW in increasing vertical mixing in the open channel bioreactor. However, this research begged the question, does the DW help increase algae growth? Three algae growth experiments comparing growth in a raceway with and without DW were completed. These experiments were successful, yielding an average 27.1% increase in the biomass. The DW appears to be a promising method of increasing algae biomass production. The next important step was to quantify vertical mixing and understand flow patterns due to two DWs side-by-side. Raceway channels are wider as they increase in size; and arrays of DWs will need to be installed to achieve quality mixing throughout the bioreactor. Quality mixing was attained for

  16. Probing kinetic drug binding mechanism in voltage-gated sodium ion channel: open state versus inactive state blockers.

    Science.gov (United States)

    Pal, Krishnendu; Gangopadhyay, Gautam

    2015-01-01

    The kinetics and nonequilibrium thermodynamics of open state and inactive state drug binding mechanisms have been studied here using different voltage protocols in sodium ion channel. We have found that for constant voltage protocol, open state block is more efficient in blocking ionic current than inactive state block. Kinetic effect comes through peak current for mexiletine as an open state blocker and in the tail part for lidocaine as an inactive state blocker. Although the inactivation of sodium channel is a free energy driven process, however, the two different kinds of drug affect the inactivation process in a different way as seen from thermodynamic analysis. In presence of open state drug block, the process initially for a long time remains entropy driven and then becomes free energy driven. However in presence of inactive state block, the process remains entirely entropy driven until the equilibrium is attained. For oscillating voltage protocol, the inactive state blocking is more efficient in damping the oscillation of ionic current. From the pulse train analysis it is found that inactive state blocking is less effective in restoring normal repolarisation and blocks peak ionic current. Pulse train protocol also shows that all the inactive states behave differently as one inactive state responds instantly to the test pulse in an opposite manner from the other two states.

  17. Fluorescence-tracking of activation gating in human ERG channels reveals rapid S4 movement and slow pore opening.

    Directory of Open Access Journals (Sweden)

    Zeineb Es-Salah-Lamoureux

    Full Text Available BACKGROUND: hERG channels are physiologically important ion channels which mediate cardiac repolarization as a result of their unusual gating properties. These are very slow activation compared with other mammalian voltage-gated potassium channels, and extremely rapid inactivation. The mechanism of slow activation is not well understood and is investigated here using fluorescence as a direct measure of S4 movement and pore opening. METHODS AND FINDINGS: Tetramethylrhodamine-5-maleimide (TMRM fluorescence at E519 has been used to track S4 voltage sensor movement, and channel opening and closing in hERG channels. Endogenous cysteines (C445 and C449 in the S1-S2 linker bound TMRM, which caused a 10 mV hyperpolarization of the V((1/2 of activation to -27.5+/-2.0 mV, and showed voltage-dependent fluorescence signals. Substitution of S1-S2 linker cysteines with valines allowed unobstructed recording of S3-S4 linker E519C and L520C emission signals. Depolarization of E519C channels caused rapid initial fluorescence quenching, fit with a double Boltzmann relationship, F-V(ON, with V((1/2 (,1 = -37.8+/-1.7 mV, and V((1/2 (,2 = 43.5+/-7.9 mV. The first phase, V((1/2 (,1, was approximately 20 mV negative to the conductance-voltage relationship measured from ionic tail currents (G-V((1/2 = -18.3+/-1.2 mV, and relatively unchanged in a non-inactivating E519C:S620T mutant (V((1/2 = -34.4+/-1.5 mV, suggesting the fast initial fluorescence quenching tracked S4 voltage sensor movement. The second phase of rapid quenching was absent in the S620T mutant. The E519C fluorescence upon repolarization (V((1/2 = -20.6+/-1.2, k = 11.4 mV and L520C quenching during depolarization (V((1/2 = -26.8+/-1.0, k = 13.3 mV matched the respective voltage dependencies of hERG ionic tails, and deactivation time constants from -40 to -110 mV, suggesting they detected pore-S4 rearrangements related to ionic current flow during pore opening and closing. CONCLUSION: THE DATA INDICATE: 1

  18. Gradually varied flow in compound open channels; Flujo gradualmente variado en canales de seccion compuesta

    Energy Technology Data Exchange (ETDEWEB)

    Sotela Avila, Gilberto [Universidad Nacional Autonoma de Mexico (Mexico)

    2001-03-01

    The author shows that the computation of gradually-varied-flow profiles in prismatic compound channels involves the solution of the dynamic equation, but using the compound channel Froude number defined by Blalock and Sturm. The same equation is used for non-prismatic channels by dividing the channel into short reaches and carrying the computation step by step through an iterative process. [Spanish] El autor demuestra que los perfiles del flujo gradualmente variado en canales prismaticos de seccion compuesta se pueden determinar mediante la integracion de la llamada ecuacion dinamica, pero usando el numero de Froude definido por Blalock y Sturm para este tipo de canales. Cuando no son prismaticos, tambien se aplica la ecuacion de la energia por tramos y el calculo sigue un proceso iterativo una vez definidos los tirantes criticos multiples y la zona en que se desarrolla el perfil.

  19. Developing a 2D vertical flow and sediment transport model for open channels using the Youngs-VOF method

    Science.gov (United States)

    Zhao, Dongmiao; Tang, Jun; Wu, Xiuguang; Lin, Changning; Liu, Lijun; Chen, Jian

    2016-05-01

    A 2D vertical (2DV) numerical model, without σ-coordinate transformation in the vertical direction, is developed for the simulation of fl ow and sediment transport in open channels. In the model, time-averaged Reynolds equations are closed by the k-ɛ nonlinear turbulence model. The modifi ed Youngs-VOF method is introduced to capture free surface dynamics, and the free surface slope is simulated using the ELVIRA method. Based on the power-law scheme, the k-ɛ model and the suspended-load transport model are solved numerically with an implicit scheme applied in the vertical plane and an explicit scheme applied in the horizontal plane. Bedload transport is modeled using the Euler-WENO scheme, and the grid-closing skill is adopted to deal with the moving channel bed boundary. Verifi cation of the model using laboratory data shows that the model is able to adequately simulate fl ow and sediment transport in open channels, and is a good starting point for the study of sediment transport dynamics in strong nonlinear fl ow scenarios.

  20. The effect of number and configuration of sediment microbial fuel cells on their performance in an open channel architecture

    Science.gov (United States)

    Abazarian, Elham; Gheshlaghi, Reza; Mahdavi, Mahmood A.

    2016-09-01

    The aim of this study is to investigate the effect of the number of sediment microbial fuel cells (SMFCs) with different configurations on the electricity generation in open channels. For this purpose, two open channels, one with three and another with four SMFCs, were operated over a long period of time and their performances were analyzed. Individual SMFCs followed an almost similar trend for electricity generation during the operation time. In addition, it was found that three-SMFC stacking in series mode produced a relatively higher maximum power density (18 mW m-2) than four-SMFC stacking (16 mW m-2). However, in parallel mode, four-SMFC stacking had a higher maximum power density of 90 mW m-2 compared to three-SMFC stacking with maximum power density of 78 mW m-2. These findings indicate that different numbers of cells significantly affect electricity generation depending on the type of SMFC configuration in the channel. The results would be helpful for application of SMFCs in large-scale.

  1. Automatic tracking of red blood cells in micro channels using OpenCV

    Science.gov (United States)

    Rodrigues, Vânia; Rodrigues, Pedro J.; Pereira, Ana I.; Lima, Rui

    2013-10-01

    The present study aims to developan automatic method able to track red blood cells (RBCs) trajectories flowing through a microchannel using the Open Source Computer Vision (OpenCV). The developed method is based on optical flux calculation assisted by the maximization of the template-matching product. The experimental results show a good functional performance of this method.

  2. D-branes as coherent states in the open string channel

    CERN Document Server

    Cantcheff, Marcelo Botta

    2007-01-01

    We show that bosonic D-brane states may be represented as coherent states in an open string representation. By using the Thermo Field Dynamics (TFD) formalism, we may construct a condensed state of open string modes which encodes the information on the D-brane configuration. We also introduce a construction alternative to TFD, which does not require to assume thermal equilibrium. It is shown that the dynamics of the system, combined with geometric properties of the duplication rules of TFD, is sufficient to obtain the thermal states and their analytic continuations in a geometric fashion. We adopt this approach to show that bosonic D-brane states in the open string sector may also be built as boundary states in a special sense. Some implications of this study on the interpretation of the open/closed duality and on the kinematical/algebraic structure of an open string field theory are also commented.

  3. Comparison of the effects of the K(+)-channel openers cromakalim and minoxidil sulphate on vascular smooth muscle.

    Science.gov (United States)

    Wickenden, A. D.; Grimwood, S.; Grant, T. L.; Todd, M. H.

    1991-01-01

    1 The actions of the potassium channel openers, cromakalim and minoxidil sulphate, were compared in a range of isolated blood vessel preparations. 2 Cromakalim and minoxidil sulphate inhibited spontaneous mechanical activity of the guinea-pig portal vein and relaxed the noradrenaline precontracted rat aorta with similar potency. In contrast, minoxidil sulphate was less potent than cromakalim in inhibiting spontaneous activity in the rat portal vein and was essentially inactive in the noradrenaline precontracted rat mesenteric artery and rabbit aorta. 3 Minoxidil sulphate did not antagonize the effects of cromakalim in the rabbit aorta indicating it was not acting as a partial 'agonist'. 4 Charybdotoxin, noxiustoxin and rubidium failed to discriminate between cromakalim and minoxidil sulphate indicating that the apparently selective effects of minoxidil sulphate were not mediated by either Ca(2+)-activated potassium channels, delayed rectifiers or rubidium impermeable potassium channels. 5 Glibenclamide antagonized the effects of cromakalim in an apparently competitive manner whereas the effects of minoxidil sulphate were antagonized in a non-competitive manner. The involvement of subtypes of ATP-sensitive potassium channels is discussed. PMID:1878752

  4. Hydrogen Sulfide Regulates Inward-Rectifying K+ Channels in Conjunction with Stomatal Closure1[OPEN

    Science.gov (United States)

    Papanatsiou, Maria; Scuffi, Denisse; Blatt, Michael R.; García-Mata, Carlos

    2015-01-01

    Hydrogen sulfide (H2S) is the third biological gasotransmitter, and in animals, it affects many physiological processes by modulating ion channels. H2S has been reported to protect plants from oxidative stress in diverse physiological responses. H2S closes stomata, but the underlying mechanism remains elusive. Here, we report the selective inactivation of current carried by inward-rectifying K+ channels of tobacco (Nicotiana tabacum) guard cells and show its close parallel with stomatal closure evoked by submicromolar concentrations of H2S. Experiments to scavenge H2S suggested an effect that is separable from that of abscisic acid, which is associated with water stress. Thus, H2S seems to define a unique and unresolved signaling pathway that selectively targets inward-rectifying K+ channels. PMID:25770153

  5. The Molecular Mechanism by which PIP2 Opens the Intracellular G-Loop Gate of a Kir3.1 Channel

    OpenAIRE

    Meng, Xuan-Yu; Zhang, Hong-Xing; Logothetis, Diomedes E.; Cui, Meng

    2012-01-01

    Inwardly rectifying potassium (Kir) channels are characterized by a long pore comprised of continuous transmembrane and cytosolic portions. A high-resolution structure of a Kir3.1 chimera revealed the presence of the cytosolic (G-loop) gate captured in the closed or open conformations. Here, we conducted molecular-dynamics simulations of these two channel states in the presence and absence of phosphatidylinositol bisphosphate (PIP2), a phospholipid that is known to gate Kir channels. Simulati...

  6. Normal insulin release during sustained hyperglycaemia in hypokalaemic periodic paralysis : Role of the potassium channel opener pinacidil in impaired muscle strength

    NARCIS (Netherlands)

    Ligtenberg, JJM; VanHaeften, TW; VanderKolk, LE; Smit, AJ; Sluiter, WJ; Links, TP

    1996-01-01

    1. Hypokalaemic periodic paralysis is characterized by attacks of muscle weakness, Glucose, insulin and an abnormal regulation of ATP-sensitive potassium channels may be involved in these attacks, We studied the effect of hyperglycaemia and of the potassium channel opener pinacidil on insulin releas

  7. Voltage dependence of cardiac excitation-contraction coupling: unitary Ca2+ current amplitude and open channel probability.

    Science.gov (United States)

    Altamirano, Julio; Bers, Donald M

    2007-09-14

    Excitation-contraction coupling in cardiac myocytes occurs by Ca2+-induced Ca2+ release, where L-type Ca2+ current evokes a larger sarcoplasmic reticulum (SR) Ca2+ release. The Ca2+-induced Ca2+ release amplification factor or gain (SR Ca2+ release/I(Ca)) is usually assessed by the V(m) dependence of current and Ca2+ transients. Gain rises at negative V(m), as does single channel I(Ca) (i(Ca)), which has led to the suggestion that the increases of i(Ca) amplitude enhances gain at more negative V(m). However, I(Ca) = NP(o) x i(Ca) (where NP(o) is the number of open channels), and NP(o) and i(Ca) both depend on V(m). To assess how i(Ca) and NP(o) separately influence Ca2+-induced Ca2+ release, we measured I(Ca) and junctional SR Ca2+ release in voltage-clamped rat ventricular myocytes using "Ca2+ spikes" (confocal microscopy). To vary i(Ca) alone, we changed [Ca2+](o) rapidly at constant test V(m) (0 mV) or abruptly repolarized from +120 mV to different V(m) (at constant [Ca2+](o)). To vary NP(o) alone, we altered Ca2+ channel availability by varying holding V(m) (at constant test V(m)). Reducing either i(Ca) or NP(o) alone increased excitation-contraction coupling gain. Thus, increasing i(Ca) does not increase gain at progressively negative test V(m). Such enhanced gain depends on lower NP(o) and reduced redundant Ca2+ channel openings (per junction) and a consequently smaller denominator in the gain equation. Furthermore, modest i(Ca) (at V(m) = 0 mV) may still effectively trigger SR Ca2+ release, whereas at positive V(m) (and smaller i(Ca)), high and well-synchronized channel openings are required for efficient excitation-contraction coupling. At very positive V(m), reduced i(Ca) must explain reduced SR Ca2+ release.

  8. Fiber-distributed multi-channel open-path H2S sensor based on tunable diode laser absorption spectroscopy

    Institute of Scientific and Technical Information of China (English)

    Dong Chen; Wenqing Liu; Yujun Zhang; Jianguo Liu; Ruifeng Kan; Min Wang; Xi Fang; Yiben Cui

    2007-01-01

    Tunable diode laser based gas detectors are now being used in a wide variety of applications for safety and environmental interest. A fiber-distributed multi-channel open-path H2S sensor based on tunable diode laser absorption spectroscopy (TDLAS) is developed, the laser used is a telecommunication near infrared distributed feed-back (DFB) tunable diode laser, combining with wavelength modulation specby combining optical fiber technique. An on-board reference cell provides on-line sensor calibration and almost maintenance-free operation. The sensor is suitable for large area field H2S monitoring application.

  9. The K+ channel opener 1-EBIO potentiates residual function of mutant CFTR in rectal biopsies from cystic fibrosis patients.

    Directory of Open Access Journals (Sweden)

    Eva K Roth

    Full Text Available BACKGROUND: The identification of strategies to improve mutant CFTR function remains a key priority in the development of new treatments for cystic fibrosis (CF. Previous studies demonstrated that the K⁺ channel opener 1-ethyl-2-benzimidazolone (1-EBIO potentiates CFTR-mediated Cl⁻ secretion in cultured cells and mouse colon. However, the effects of 1-EBIO on wild-type and mutant CFTR function in native human colonic tissues remain unknown. METHODS: We studied the effects of 1-EBIO on CFTR-mediated Cl⁻ secretion in rectal biopsies from 47 CF patients carrying a wide spectrum of CFTR mutations and 57 age-matched controls. Rectal tissues were mounted in perfused micro-Ussing chambers and the effects of 1-EBIO were compared in control tissues, CF tissues expressing residual CFTR function and CF tissues with no detectable Cl⁻ secretion. RESULTS: Studies in control tissues demonstrate that 1-EBIO activated CFTR-mediated Cl⁻ secretion in the absence of cAMP-mediated stimulation and potentiated cAMP-induced Cl⁻ secretion by 39.2±6.7% (P<0.001 via activation of basolateral Ca²⁺-activated and clotrimazole-sensitive KCNN4 K⁺ channels. In CF specimens, 1-EBIO potentiated cAMP-induced Cl⁻ secretion in tissues with residual CFTR function by 44.4±11.5% (P<0.001, but had no effect on tissues lacking CFTR-mediated Cl⁻ conductance. CONCLUSIONS: We conclude that 1-EBIO potentiates Cl⁻secretion in native CF tissues expressing CFTR mutants with residual Cl⁻ channel function by activation of basolateral KCNN4 K⁺ channels that increase the driving force for luminal Cl⁻ exit. This mechanism may augment effects of CFTR correctors and potentiators that increase the number and/or activity of mutant CFTR channels at the cell surface and suggests KCNN4 as a therapeutic target for CF.

  10. Characterization of Unruh Channel in the context of Open Quantum Systems

    CERN Document Server

    Banerjee, Subhashish; Omkar, S; Srikanth, R

    2016-01-01

    We show through the Choi matrix approach that the effect of Unruh acceleration on a qubit is similar to the interaction of the qubit with a vacuum bath, despite the finiteness of the Unruh temperature. Thus, rather counterintuitvely, from the perspective of decoherence in this framework, the particle experiences a vacuum bath with a temperature-modified interaction strength, rather than a thermal bath. We investigate how this "relativistic decoherence" is modified by the presence of environmentally induced decoherence, by studying the degradation of quantum information, as quantified by parameters such as nonlocality, teleportation fidelity, entanglement, coherence and quantum measurement-induced disturbance (a discord-like measure). Also studied are the performance parameters such as gate and channel fidelity. We highlight the distinction between dephasing and dissipative environmental interactions, by considering the actions of quantum non-demolition and squeezed generalized amplitude damping channels, resp...

  11. Photo-switchable tweezers illuminate pore-opening motions of an ATP-gated P2X ion channel.

    Science.gov (United States)

    Habermacher, Chloé; Martz, Adeline; Calimet, Nicolas; Lemoine, Damien; Peverini, Laurie; Specht, Alexandre; Cecchini, Marco; Grutter, Thomas

    2016-01-25

    P2X receptors function by opening a transmembrane pore in response to extracellular ATP. Recent crystal structures solved in apo and ATP-bound states revealed molecular motions of the extracellular domain following agonist binding. However, the mechanism of pore opening still remains controversial. Here we use photo-switchable cross-linkers as 'molecular tweezers' to monitor a series of inter-residue distances in the transmembrane domain of the P2X2 receptor during activation. These experimentally based structural constraints combined with computational studies provide high-resolution models of the channel in the open and closed states. We show that the extent of the outer pore expansion is significantly reduced compared to the ATP-bound structure. Our data further reveal that the inner and outer ends of adjacent pore-lining helices come closer during opening, likely through a hinge-bending motion. These results provide new insight into the gating mechanism of P2X receptors and establish a versatile strategy applicable to other membrane proteins.

  12. On the turbulent flow around water turbines placed in an open channel: an experimental study

    Science.gov (United States)

    Sotiropoulos, F.; Chamorro, L. P.; Arndt, R.

    2010-12-01

    A growing interest in water turbines (using tidal, river, marine currents) has been observed during the last few years. Fundamental understanding of the turbulent flow around the water turbines is crucial to predict the potential effects of these structures on the local morphology, water flow and power available in the current, among others. In this study, a series of model water turbines (single and an aligned array) of 50 cm rotor diameter were placed in the main channel of the Saint Anthony Falls Laboratory at the University of Minnesota. The main channel is approx 2.5 m wide, 1.8 m height and 85 m long. Flow around the water turbines were analyzed under subcritical conditions. Turbine hub heights coincided with the channel mid height. A series of acoustic Doppler anemometers (ADV) were used to obtain 3 velocity components of the flow at a rate of 200 Hz. Selected streamwise and spanwise vertical planes were measured to describe the kinematics around the water turbines. Potential interactions with the lateral walls were also addressed. High order statistics (mean velocity, turbulence intensities and Reynolds stresses) as well as two point correlations and spectra were computed to infer fundamental differences and similitude with their counterparts, the wind turbines.

  13. THE LOSS OF STABILITY OF LAMINAR FLOW IN OPEN CHANNEL AND THE MECHANISM OF SAND RIPPLE FORMATION

    Institute of Scientific and Technical Information of China (English)

    白玉川; 罗纪生

    2002-01-01

    In the flow on a mobile bed in an open channel, sand ripple often appears after the sediment begins to move. Different scholars have different views on the formation of sand ripples. This paper holds that as the ripple in general is very small, its formation is due to the instability of the laminar flow or the evolution of the small-scale coherent structures in the sublayer adjacent to the wall of the open channel. When the shear stresses caused by the disturbing waves or the coherent structure near the bed surface boundary and the water flow itself are greater than the shields stresses, responses on the bed surface appear and the sand ripple forms. If the frequency of the shear stress caused by the disturbance is close to the natural frequency of the sand grains that produced resonance,such a phenomenon is called the "detection property" of the sediment. It is at this point that the maximum resonance appears and the sand ripple develops rapidly.

  14. Dual state-parameter optimal estimation of one-dimensional open channel model using ensemble Kalman filter

    Institute of Scientific and Technical Information of China (English)

    LAI Rui-xun; FANG Hong-wei; HE Guo-jian; YU Xin; YANG Ming; WANG Ming

    2013-01-01

    In this paper,both state variables and parameters of one-dimensional open channel model are estimated using a framework of the Ensemble Kalman Filter (EnKF).Compared with observation,the predicted accuracy of water level and discharge are improved while the parameters of the model are identified simultaneously.With the principles of the EnKF,a state-space description of the Saint-Venant equation is constructed by perturbing the measurements with Gaussian error distribution.At the same time,the roughness,one of the key parameters in one-dimensional open channel,is also considered as a state variable to identify its value dynamically.The updated state variables and the parameters are then used as the initial values of the next time step to continue the assimilation process.The usefulness and the capability of the dual EnKF are demonstrated in the lower Yellow River during the water-sediment regulation in 2009.In the optimization process,the errors between the prediction and the observation are analyzed,and the rationale of inverse roughness is discussed.It is believed that (1) the flexible approach of the dual EnKF can improve the accuracy of predicting water level and discharge,(2) it provides a probabilistic way to identify the model error which is feasible to implement but hard to handle in other filter systems,and (3) it is practicable for river engineering and management.

  15. Experimental and numerical investigation of the flow field in the gradual transition of rectangular to trapezoidal open channels

    Directory of Open Access Journals (Sweden)

    Adel Asnaashari

    2016-01-01

    Full Text Available Transitions are structures that can change geometry and flow velocity through varying the cross-sections of their channels. Under subcritical flow and steady flow conditions, it is necessary to reduce the flow velocity gradually due to increasing water pressure and adverse pressure gradients. Due to the separation of flow and subsequent eddy formation, a significant energy loss is incurred along the transition. This study presents the results of experimental investigations of the subcritical flow along the expansive transition of rectangular to trapezoidal channels. A numerical simulation was developed using a finite volume of fluid (VOF method with a Reynolds stress turbulence model. Water surface profiles and velocity distributions of flow through the transition were measured experimentally and compared with the numerical results. A good agreement between the experimental and numerical model results showed that the Reynolds model and VOF method are capable of simulating the hydraulic flow in open channel transitions. Also, the efficiency of the transition and coefficient of energy head loss were calculated. The results show that with an increasing upstream Froude number, the efficiency of the transition and coefficient of energy head loss decrease and increase, respectively. The results also show the ability of numerical simulation to simulate the flow separation zones and secondary current along the transition for different inlet discharges.

  16. Effectiveness comparison of channel-assisted mini-incision and open Achilles shortening for treatment of healed Achilles tendon rupture

    Directory of Open Access Journals (Sweden)

    Hong-zhe QI

    2017-08-01

    Full Text Available Objective To compare the clinical effectiveness between the channel-assisted mini-invasion and open Achilles shortening for treatment of the elongated Achilles tendon following previous rupture. Methods The clinical data of 19 patients admitted from Dec. 2013 to Dec. 2015 and met the inclusion criteria were analyzed retrospectively. Eight patients were treated with shortening operation by channel-assisted minimally invasive repair system, while 11 patients received dissection of Krackow Achilles tendon shortening. There was no significant difference between the two groups in gender, age, injury to operation time, preoperative calf circumference and preoperative AOFAS (American Orthopaedic Foot & Ankle Society score (P>0.05. Results The operation time, incision length and postoperative hospital days were significantly less in min-invasion group than in incision group (P0.05. Conclusion Channel-assisted minimally invasive Achilles tendon shortening operation has not only similar effectiveness to the incision shorting operation for the treatment of elongated Achilles tendon following previous rupture, but also has the advantages of shortening operation time and stay in hospital and avoidance of sural nerve injury. DOI: 10.11855/j.issn.0577-7402.2017.07.12

  17. Effect of a Weir-Type Obstruction with Different Geometric and Hydraulic Conditions on Flow Structure in an Open Channel

    Directory of Open Access Journals (Sweden)

    Shahid Ali

    2014-07-01

    Full Text Available This paper presents results from an experimental study which was conducted at Technical University Delft, Netherland. The research was made on obstructions resembling weirs in an open channel. This weir-type obstruction was a representative of groyne/dike in a natural channel. The experimentation was performed in the laboratory for different values of inflow (25 l/sec and 40 l/sec, weir with and without vegetation and with different leeward slopes of the weir (1:4 and 1:7. The results were obtained for Reynolds normal stresses, longitudinal and vertical velocities. A comparison was made between the results of 1:4 and 1:7 leeward slope ratios. The data was collected with a LDA (Laser Doppler Anemometer. The vegetation was modeled with vertical circular rods placed over the crest of the weir. The blockage area due to this vegetation was 25% of the total area. The velocity data was gathered at around ten locations both at upstream and downstream the weir to get an insight into the flow structure. The results have been presented in the shape of vertical profiles both for velocities as well as Reynolds stresses at different locations of the channel.

  18. The surface accessibility of the glycine receptor M2-M3 loop is increased in the channel open state.

    Science.gov (United States)

    Lynch, J W; Han, N L; Haddrill, J; Pierce, K D; Schofield, P R

    2001-04-15

    Mutations in the extracellular M2-M3 loop of the glycine receptor (GlyR) alpha1 subunit have been shown previously to affect channel gating. In this study, the substituted cysteine accessibility method was used to investigate whether a structural rearrangement of the M2-M3 loop accompanies GlyR activation. All residues from R271C to V277C were covalently modified by both positively charged methanethiosulfonate ethyltrimethylammonium (MTSET) and negatively charged methanethiosulfonate ethylsulfonate (MTSES), implying that these residues form an irregular surface loop. The MTSET modification rate of all residues from R271C to K276C was faster in the glycine-bound state than in the unliganded state. MTSES modification of A272C, L274C, and V277C was also faster in the glycine-bound state. These results demonstrate that the surface accessibility of the M2-M3 loop is increased as the channel transitions from the closed to the open state, implying that either the loop itself or an overlying domain moves during channel activation.

  19. KR-31761, a novel K+(ATP)-channel opener, exerts cardioprotective effects by opening both mitochondrial K+(ATP) and Sarcolemmal K+(ATP) channels in rat models of ischemia/reperfusion-induced heart injury.

    Science.gov (United States)

    Yang, Min-Kyu; Lee, Sung-Hun; Seo, Ho-Won; Yi, Kyu-Yang; Yoo, Sung-Eun; Lee, Byung-Ho; Chung, Hun-Jong; Won, Hyung-Sik; Lee, Chang-Soo; Kwon, Suk-Hyung; Choi, Wahn-Soo; Shin, Hwa-Sup

    2009-02-01

    The cardioprotective effects of KR-31761, a newly synthesized K+(ATP) opener, were evaluated in rat models of ischemia/reperfusion (I/R) heart injury. In isolated rat hearts subjected to 30-min global ischemia/30-min reperfusion, KR-31761 perfused prior to ischemia significantly increased both the left ventricular developed pressure (% of predrug LVDP: 17.8, 45.1, 54.2, and 62.6 for the control, 1 microM, 3 microM, and 10 microM, respectively) and double product (DP: heart rate x LVDP; % of predrug DP: 17.5, 44.9, 56.2, and 64.5 for the control, 1 microM, 3 microM, and 10 microM, respectively) at 30-min reperfusion while decreasing the left ventricular end-diastolic pressure (LVEDP). KR-31761 (10 microM) significantly increased the time to contracture during the ischemic period, whereas it concentration-dependently decreased the lactate dehydrogenase release during reperfusion. All these parameters were significantly reversed by 5-hydroxydecanoate (5-HD, 100 microM) and glyburide (1 microM), selective and nonselective blockers of the mitochondrial K+(ATP) (mitoK+(ATP)) channel and K+(ATP) channel, respectively. In anesthetized rats subjected to 30-min occlusion of left anterior descending coronary artery/2.5-h reperfusion, KR-31761 administered 15 min before the onset of ischemia significantly decreased the infarct size (72.2%, 55.1%, and 47.1% for the control, 0.3 mg/kg, i.v., and 1.0 mg/kg, i.v., respectively); and these effects were completely and almost completely abolished by 5-HD (10 mg/kg, i.v.) and HMR-1098, a selective blocker of sarcolemmal K+(ATP) (sarcK+(ATP)) channel (6 mg/kg, i.v.) administered 5 min prior to KR-31761 (72.3% and 67.9%, respectively). KR-31761 only slightly relaxed methoxamine-precontracted rat aorta (IC50: > 30.0 microM). These results suggest that KR-31761 exerts potent cardioprotective effects through the opening of both mitoK+(ATP) and sarcK+(ATP) channels in rat hearts with a minimal vasorelaxant effect.

  20. Open b and $b\\bar{b}$ cross section using inclusive and exclusive channels at ATLAS

    CERN Document Server

    Christidi, I A

    2011-01-01

    The production of b-quarks in proton-proton collisions at the LHC provides an important test of perturbative QCD. The cross-section can either be measured inclusively, using all tagged b-jets, or exclusively, exploiting specific B-hadron decay final states. This note describes the measurements of the inclusive b-jet and bb(bar) production cross sections, the inclusive B → J/ΨX cross-section and the observation of the exclusive channels B± → J/ΨK ± , Bd → J/ΨK 0∗ and Bs → J/Ψφ performed with the ATLAS detector at the LHC.

  1. Silent S-Type Anion Channel Subunit SLAH1 Gates SLAH3 Open for Chloride Root-to-Shoot Translocation.

    Science.gov (United States)

    Cubero-Font, Paloma; Maierhofer, Tobias; Jaslan, Justyna; Rosales, Miguel A; Espartero, Joaquín; Díaz-Rueda, Pablo; Müller, Heike M; Hürter, Anna-Lena; Al-Rasheid, Khaled A S; Marten, Irene; Hedrich, Rainer; Colmenero-Flores, José M; Geiger, Dietmar

    2016-08-22

    Higher plants take up nutrients via the roots and load them into xylem vessels for translocation to the shoot. After uptake, anions have to be channeled toward the root xylem vessels. Thereby, xylem parenchyma and pericycle cells control the anion composition of the root-shoot xylem sap [1-6]. The fact that salt-tolerant genotypes possess lower xylem-sap Cl(-) contents compared to salt-sensitive genotypes [7-10] indicates that membrane transport proteins at the sites of xylem loading contribute to plant salinity tolerance via selective chloride exclusion. However, the molecular mechanism of xylem loading that lies behind the balance between NO3(-) and Cl(-) loading remains largely unknown. Here we identify two root anion channels in Arabidopsis, SLAH1 and SLAH3, that control the shoot NO3(-)/Cl(-) ratio. The AtSLAH1 gene is expressed in the root xylem-pole pericycle, where it co-localizes with AtSLAH3. Under high soil salinity, AtSLAH1 expression markedly declined and the chloride content of the xylem sap in AtSLAH1 loss-of-function mutants was half of the wild-type level only. SLAH3 anion channels are not active per se but require extracellular nitrate and phosphorylation by calcium-dependent kinases (CPKs) [11-13]. When co-expressed in Xenopus oocytes, however, the electrically silent SLAH1 subunit gates SLAH3 open even in the absence of nitrate- and calcium-dependent kinases. Apparently, SLAH1/SLAH3 heteromerization facilitates SLAH3-mediated chloride efflux from pericycle cells into the root xylem vessels. Our results indicate that under salt stress, plants adjust the distribution of NO3(-) and Cl(-) between root and shoot via differential expression and assembly of SLAH1/SLAH3 anion channel subunits.

  2. POINTWISE AND UPWIND DISCRETIZATIONS OF SOURCE TERMS IN OPEN-CHANNEL FLOOD ROUTING

    Institute of Scientific and Technical Information of China (English)

    MENG Jian; CAO Zhi-xian; CARLING Paul A.

    2006-01-01

    Upwind algorithms are becoming progressively popular for river flood routing due to their capability of resolving trans-critical flow regimes. For consistency, these algorithms suggest natural upwind discretization of the source term, which may be essential for natural channels with irregular geometry. Yet applications of these upwind algorithms to natural river flows are rare, and in such applications the traditional and simpler pointwise, rather than upwind discretization of the source term is used. Within the framework of a first-order upwind algorithm, this paper presents a comparison of upwind and pointwise discretizations of the source term. Numerical simulations were carried out for a selected irregular channel comprising a pool-riffle sequence in the River Lune, England with observed data. It is shown that the impact of pointwise discretization, compared to the upwind, is appreciable mainly in flow zones with the Froude number closer to or larger than unity. The discrepancy due to pointwise and upwind discretizations of the source term is negligible in flow depth and hence in water surface elevation, but well manifested in mean velocity and derived flow quantities. Also the occurrence of flow reversal and equalisation over the pool-riffle sequence in response to increasing discharges is demonstrated.

  3. Investigation on Twisting and Side Wall Opening Occurring in Curved Hat Channel Products Made of High Strength Steel Sheets

    Science.gov (United States)

    Takamura, Masato; Fukui, Ayako; Yano, Hiroshi; Hama, Takayuki; Sunaga, Hideyuki; Makinouchi, Akitake; Asakawa, Motoo

    2011-08-01

    High strength steel sheets are becoming increasingly important for the weight reduction of automotive bodies to meet the requirements for reduced environmental impact. However, dimensional defects resulting from springback are serious issues, and effective methods of predicting and reducing such defects are necessary. In this study, we numerically and experimentally analyzed the mechanisms of dimensional inaccuracies caused by springback occurring in curved hat channel deep drawing products. The analysis was based on the static explicit FEM software "TP-STRUCT" (the solver part is known as "STAMP3D"). The results of the experiments and simulations similarly show that the twist angle is positive (right-hand system) when the drawing height is relatively large. We calculated the twist torque around the longitudinal axis using the stress distributions obtained by FE analysis. Through the investigation of twist torque and its transition during the drawing and die removal processes, we found that the negative torque generated by side wall opening occurring in the die removal process is the dominant factor of the positive twist. Knowing such mechanisms of twist in cases with a relatively large drawing height, we attempted to explore methods of reducing side wall opening by giving the side wall a stepped shape with the eventual aim of reducing twist. Consequently, we concluded that the stepped shape on the side wall has marked effects of reducing side wall opening, mainly through the elimination of bending-unbending effects on die shoulders, which was verified by observing the stress distribution obtained by FE analysis.

  4. Hydrodynamics of concordant and discordant fixed bed open-channel confluences

    Science.gov (United States)

    Birjukova Canelas, Olga; Lage Ferreira, Rui Miguel; Heleno Cardoso, António

    2017-04-01

    The detailed characterization of the flow field in river confluences constitutes a relevant step towards the understanding of the hydro-morpho-dynamics of these key zones of the fluvial system. With a few exceptions, existing works on this topic covered concordant bed scenarios, meaning that both confluent channels had the same elevation. This laboratory study aims to contribute to a detailed three-dimensional characterization of the flow field at a fixed bed confluence, as well as to shed light on how bed elevation discordance modifies the flow patterns of the converging flows. While the junction angle and the discharge ratio were kept fixed, two scenarios were studied on the basis of detailed water level and 3D ADV measurements at the denser mesh ever. The internal flow structure of the concordant bed scenario mostly complied with the classical conceptual models. A relevant difference concerns the size of the stagnation zone, much smaller close to the bed of the discordant bed confluence. A more significant difference is a horizontal flow structure, not previously identified in the literature, characterized by strong streamwise mean vorticity and strong secondary motion. It is observed for the discordant bed case, occurring along the inner wall of the main channel and downstream the junction corner. This structure is spatially well-correlated to a pronounced imbalance of cross-stream and vertical normal Reynolds stresses. This highlights the role of Reynolds stress anisotropy (RSA) that is generated in the shear layers than accompany the entrance of the tributary flow. Since this structure is not present in the concordant case, where RSA is also evident, it is argued that convective effects should also play a role in its formation, presumably due to deflection of the flow in the main channel by the tributary. The newly identified secondary motion should, thus, be a combination of Prandtĺs second kind and Prandtĺs first kind of secondary flow. The relative

  5. Offset-Free Model Predictive Control of Open Water Channel Based on Moving Horizon Estimation

    Science.gov (United States)

    Ekin Aydin, Boran; Rutten, Martine

    2016-04-01

    Model predictive control (MPC) is a powerful control option which is increasingly used by operational water managers for managing water systems. The explicit consideration of constraints and multi-objective management are important features of MPC. However, due to the water loss in open water systems by seepage, leakage and evaporation a mismatch between the model and the real system will be created. These mismatch affects the performance of MPC and creates an offset from the reference set point of the water level. We present model predictive control based on moving horizon estimation (MHE-MPC) to achieve offset free control of water level for open water canals. MHE-MPC uses the past predictions of the model and the past measurements of the system to estimate unknown disturbances and the offset in the controlled water level is systematically removed. We numerically tested MHE-MPC on an accurate hydro-dynamic model of the laboratory canal UPC-PAC located in Barcelona. In addition, we also used well known disturbance modeling offset free control scheme for the same test case. Simulation experiments on a single canal reach show that MHE-MPC outperforms disturbance modeling offset free control scheme.

  6. Behavior of near-field dilution of thermal buoyant jet discharged horizontally in compound open-channel

    Institute of Scientific and Technical Information of China (English)

    2008-01-01

    The RNG к-ε model considering the buoyancy effect,which is solved by the hybrid finite analytic method,is used to simulate the mixture of the horizontal round thermal buoyant jet in compound open channel flow.The mixing features near the spout and flowing characteristic of the secondary currents are studied by numerical simulation.Meanwhile,(1) the distribution of the measured isovels for stream-wise velocity,(2) secondary currents,(3) the distribution of the measured isovels for temperature of typical cross-section near the spout,were obtained by the three-dimensional Micro ADV and the Temperature measuring device.Compared with experimental data,the RNG к-εmodel based on buoyancy effect can preferably simulate the jet which performs the bifurcation phenomenon,jet reattachment (Conada effect) and beach secondary currents phenomenon with the effect of ambient flow,buoyancy,and secondary currents of compound section and so on.

  7. Numerical and Experimental Investigation of Natural Convection in Open-Ended Channels with Application to Building Integrated Photovoltaic (BIPV Systems

    Directory of Open Access Journals (Sweden)

    Timchenko V.

    2015-01-01

    Full Text Available Numerical and experimental investigations of the flow and heat transfer in open-ended channel formed by the double skin façade have been undertaken in order to improve understanding of the phenomena and to apply it to passive cooling of building integrated photovoltaic systems. Both uniform heating and non-uniform heating configurations in which heat sources alternated with unheated zones on both skins were studied. Different periodic and asymmetric heating modes have been considered for the same aspect ratio 1/15 of wall distance to wall height and for periodicity 1/15 and 4/15 of heated/unheated zones and heat input, 220 W/m2. In computational study three dimensional transient LES simulation was carried out. It is shown that in comparison to uniformly heating configuration, non-uniformly heating configuration enhances both convective heat transfer and chimney effect.

  8. A LINEAR THEORY FOR DISTURBANCE OF COHERENT STRUCTURE AND MECHANISM OF SAND WAVES IN OPEN-CHANNEL FLOW

    Institute of Scientific and Technical Information of China (English)

    Yuchuan BAI; Andreas MALCHEREK; Changbo JIANG

    2001-01-01

    The formation of sand wave is such a process in which the roughness and discontinuity of the original bed surface cause the disturbance of the bottom laminar flow in an open channel,and the development of the disturbance in turn leads to instability of the flow and the appearance of the coherent structure. The evolution and development of the coherent structure further promote the undulations of bed surface and sand waves rise finally. The sand wave is explained as a result of action that the bed sediment particles are disturbed by the coherent structure. This study shows that the sand wave formation is the result of disturbance action of neutral coherent structure, and the sand wave shape obtained in computations is identical to the practical one.

  9. EVALUATION OF THE SHADING METHOD FOR REDUCING IMAGE BLOOMING IN THE PIV MEASUREMENT OF OPEN CHANNEL FLOWS

    Institute of Scientific and Technical Information of China (English)

    ZHONG Qiang; LI Dan-xun; CHEN Qi-gang; WANG Xing-kui

    2012-01-01

    The shading method is a simple but effective way of reducing image blooming in the measurement of open channel flows with the Particle Image Veloeimetry (PIV).The current paper proposes a simplified analytical model for light attenuation using this method.The model is verified against experimental data,and the influence of several parameters is illustrated numerically.The possible adverse effect due to the light attenuation is shown to be limited when the parameters in the shading method are in an adequate range,as shown by processing standard images of Case B in PIV Challenge 03.A simple criterion for setting the shade in experiment is given for controlling the errors caused by the shading technique within an acceptable range.

  10. Sediment, water column, and open-channel denitrification in rivers measured using membrane-inlet mass spectrometry

    Science.gov (United States)

    Reisinger, Alexander J.; Tank, Jennifer L.; Hoellein, Timothy J.; Hall, Robert O.

    2016-05-01

    Riverine biogeochemical processes are understudied relative to headwaters, and reach-scale processes in rivers reflect both the water column and sediment. Denitrification in streams is difficult to measure, and is often assumed to occur only in sediment, but the water column is potentially important in rivers. Dissolved nitrogen (N) gas flux (as dinitrogen (N2)) and open-channel N2 exchange methods avoid many of the artificial conditions and expenses of common denitrification methods like acetylene block and 15N-tracer techniques. We used membrane-inlet mass spectrometry and microcosm incubations to quantify net N2 and oxygen flux from the sediment and water column of five Midwestern rivers spanning a land use gradient. Sediment and water column denitrification ranged from below detection to 1.8 mg N m-2 h-1 and from below detection to 4.9 mg N m-2 h-1, respectively. Water column activity was variable across rivers, accounting for 0-85% of combined microcosm denitrification and 39-85% of combined microcosm respiration. Finally, we estimated reach-scale denitrification at one Midwestern river using a diel, open-channel N2 exchange approach based on reach-scale metabolism methods, providing an integrative estimate of riverine denitrification. Reach-scale denitrification was 8.8 mg N m-2 h-1 (95% credible interval: 7.8-9.7 mg N m-2 h-1), higher than combined sediment and water column microcosm estimates from the same river (4.3 mg N m-2 h-1) and other estimates of reach-scale denitrification from streams. Our denitrification estimates, which span habitats and spatial scales, suggest that rivers can remove N via denitrification at equivalent or higher rates than headwater streams.

  11. Large-conductance K+ channel openers NS1619 and NS004 as inhibitors of mitochondrial function in glioma cells.

    Science.gov (United States)

    Debska, Grazyna; Kicinska, Anna; Dobrucki, Jerzy; Dworakowska, Beata; Nurowska, Ewa; Skalska, Jolanta; Dolowy, Krzysztof; Szewczyk, Adam

    2003-06-01

    Recently, it has been reported that large-conductance Ca(2+)-activated potassium channels, also known as BK(Ca)-type potassium channels, are present in the inner mitochondrial membrane of the human glioma LN229 cell line. Hence, in the present study, we have investigated whether BK(Ca)-channel openers (BK(Ca)COs), such as the benzimidazolone derivatives NS004 (5-trifluoromethyl-1-(5-chloro-2-hydroxyphenyl)-1,3-dihydro-2H-benzimidazole-2-one) and NS1619 (1,3-dihydro-1-[2-hydroxy-5-(trifluoromethyl)phenyl]-5-(trifluoromethyl)-2H-benzimidazol-2-one), affect the functioning of LN229 glioma cell mitochondria in situ. We examined the effect of BK(Ca)COs on mitochondrial membrane potential, mitochondrial respiration and plasma membrane potassium current in human glioma cell line LN229. We found that BK(Ca)COs decrease the mitochondrial membrane potential with an EC(50) value of 3.6+/-0.4 microM for NS1619 and 5.4+/-0.8 microM for NS004. This mitochondrial depolarization was accompanied by an inhibition of the mitochondrial respiratory chain. Both BK(Ca)COs induced whole-cell potassium current blocked by charybdotoxin, as measured by the patch-clamp technique. The BK(Ca)COs had no effect on membrane bilayer conductance. Moreover, the inhibition of mitochondrial function by NS004 and NS1619 was without effect on cell survival, as measured by lactate dehydrogenase release from the cells.

  12. Gradually-varied open-channel flow profiles normalized by critical depth and analytically solved by using Gaussian hypergeometric functions

    Directory of Open Access Journals (Sweden)

    C. D. Jan

    2012-10-01

    Full Text Available The equation of one-dimensional gradually-varied flow (GVF in sustaining and non-sustaining open channels is normalized using the critical depth, hc, and then analytically solved by the direct integration method with the use of the Gaussian hypergeometric function (GHF. The GHF-based solution so obtained from the hc-based dimensionless GVF equation is more useful and versatile than its counterpart from the GVF equation normalized by the normal depth, hn, because the GHF-based solutions of the hc-based dimensionless GVF equation for the mild (M and adverse (A profiles can asymptotically reduce to the hc-based dimensionless horizontal (H profiles as hc/hn → 0. An in-depth analysis of the hc-based dimensionless profiles expressed in terms of the GHF for GVF in sustaining and adverse wide channels has been conducted to discuss the effects of hc/hn and the hydraulic exponent N on the profiles This paper has laid the foundation to compute at one sweep the hc-based dimensionless GVF profiles in a series of sustaining and adverse channels, which have horizontal slopes sandwiched in between them, by using the GHF-based solutions.

  13. Hyporheic flow and dissolved oxygen distribution in fish nests: The effects of open channel velocity, permeability patterns, and groundwater upwelling

    Science.gov (United States)

    Cardenas, M. Bayani; Ford, Aimee E.; Kaufman, Matthew H.; Kessler, Adam J.; Cook, Perran L. M.

    2016-12-01

    Many fish lay their eggs in nests, or redds, which they construct in sediment. The viability of eggs depends on many factors, particularly their oxygenation. Because dissolved oxygen is typically saturated within the stream channel, the dissolved oxygen distribution within the redd depends on whether or not hyporheic flow and transport occur within the sediment. We conducted a series of flume and numerical flow and age transport modeling experiments with the aim of understanding the effects of salmonid redds on the hyporheic transport of young oxygenated water. Hyporheic flow was visualized directly through dye injections. Dissolved oxygen throughout the fish nest was measured using a planar optode. Experiments were conducted at various open channel flow velocities in order to understand their effect on dissolved oxygen, and computational simulations considered various sediment textures and ambient groundwater upwelling rates to add process-level insight. We found that, as also shown by previous studies, the redd topography induces multiscale hyporheic flow that effectively flushes the egg pocket location with younger presumably oxygenated water; older water upwells and forms anoxic zones. This pattern persists even at the lowest channel flow rates and at small upwelling velocities of older ambient groundwater which splits the multiscale hyporheic flow cells into isolated pockets. Large groundwater upwelling rates can shut down all the hyporheic flushing. The relatively coarse texture of the redd further promotes hyporheic flushing of the redd sediment with oxygenated water. Thus, redd morphology and sediment texture optimally combine to induce hyporheic exchange flow that delivers young oxygenated water to the egg pocket.

  14. Trapping of ivermectin by a pentameric ligand-gated ion channel upon open-to-closed isomerization

    Science.gov (United States)

    Degani-Katzav, Nurit; Klein, Moshe; Har-Even, Moran; Gortler, Revital; Tobi, Ruthi; Paas, Yoav

    2017-01-01

    Ivermectin (IVM) is a broad-spectrum anthelmintic drug used to treat human parasitic diseases like river blindness and lymphatic filariasis. By activating invertebrate pentameric glutamate-gated chloride channels (GluCl receptors; GluClRs), IVM induces sustained chloride influx and long-lasting membrane hyperpolarization that inhibit neural excitation in nematodes. Although IVM activates the C. elegans heteromeric GluClα/β receptor, it cannot activate a homomeric receptor composed of the C. elegans GluClβ subunits. To understand this incapability, we generated a homopentameric α7-GluClβ chimeric receptor that consists of an extracellular ligand-binding domain of an α7 nicotinic acetylcholine receptor known to be potentiated by IVM, and a chloride-selective channel domain assembled from GluClβ subunits. Application of IVM prior to acetylcholine inhibited the responses of the chimeric α7-GluClβR. Adding IVM to activated α7-GluClβRs, considerably accelerated the decline of ACh-elicited currents and stabilized the receptors in a non-conducting state. Determination of IVM association and dissociation rate constants and recovery experiments suggest that, following initial IVM binding to open α7-GluClβRs, the drug induces a conformational change and locks the ion channel in a closed state for a long duration. We further found that IVM also inhibits the activation by glutamate of a homomeric receptor assembled from the C. elegans full-length GluClβ subunits. PMID:28218274

  15. Mechanoprotection by Polycystins against Apoptosis Is Mediated through the Opening of Stretch-Activated K2P Channels

    Directory of Open Access Journals (Sweden)

    Rémi Peyronnet

    2012-03-01

    Full Text Available How renal epithelial cells respond to increased pressure and the link with kidney disease states remain poorly understood. Pkd1 knockout or expression of a PC2 pathogenic mutant, mimicking the autosomal dominant polycystic kidney disease, dramatically enhances mechanical stress-induced tubular apoptotic cell death. We show the presence of a stretch-activated K+ channel dependent on the TREK-2 K2P subunit in proximal convoluted tubule epithelial cells. Our findings further demonstrate that polycystins protect renal epithelial cells against apoptosis in response to mechanical stress, and this function is mediated through the opening of stretch-activated K2P channels. Thus, to our knowledge, we establish for the first time, both in vitro and in vivo, a functional relationship between mechanotransduction and mechanoprotection. We propose that this mechanism is at play in other important pathologies associated with apoptosis and in which pressure or flow stimulation is altered, including heart failure or atherosclerosis.

  16. Sudden acceleration of flames in open channels driven by hydraulic resistance

    CERN Document Server

    Yanez, J; Bykov, V

    2012-01-01

    Hydrogen-air deflagrations with venting at the end of obstructed tubes are studied experimentally and numerically. A shockless transition to the so-called chocked regime of the flame propagation is reported. Mixtures with 13% vol. of hydrogen were ignited from the open end of the tube at the interface between fuel and the ambient air. Three venting ratios were selected, closed, 40% and 100%. In all cases the flame initially propagates without acceleration at a velocity close to the laminar flame speed. The flame configuration excludes most of conventionally acknowledged phenomena of the DDT, namely, volumetric explosions, igniting shock and shock waves interactions. However, after an induction period, of the order of 1 sec, the flame accelerates more than 100 times, within a period of 3-30 ms, until the steady-state choked regime is established. The mechanism of such rapid acceleration is investigated both numerically and analytically. A one dimensional reduced description was suggested and analyzed to model ...

  17. Two-dimensional crystals of mesoporous silica SBA-15 nanosheets with perpendicular and open channels

    Directory of Open Access Journals (Sweden)

    Yi-Qi Yeh

    2014-11-01

    Full Text Available A preparation of mesoporous silica SBA-15 thin sheets with perpendicular nanochannels (SBA(⊥ and open ends is reported here. At a synthesis condition of pH = 2 where the silica condensation is extremely slow, micron-sized single-crystal-like hexagonally faceted nanosheets (SBA(⊥-pH2 with aspect ratio of 10–50 were formed. The nanosheets can attach to each other in sideway to extend the thin sheet. At pH = 5, multi-domain SBA(⊥-pH5 nanosheets are formed, and stacking attachment of sheets is preferred. Vivid Moiré patterns are observed in large areas of stacked silica sheets, indicating excellent structure order.

  18. In-channel printing-device opening assay for micropatterning multiple cells and gene analysis.

    Science.gov (United States)

    Zhou, Hao; Zhao, Liang; Zhang, Xueji

    2015-02-17

    Herein we report an easy but versatile method for patterning different cells on a single substrate by using a microfluidic approach that allows not only spatial and temporal control of multiple microenvironments but also retrieval of specific treated cells to profile their expressed genetic information at around 10-cell resolution. By taking advantages of increased surface area of gold nanoparticles on a poly(dimethylsiloxane) (PDMS) coated substrate, cell adhesive-promotive protein, human fibronectin (hFN) can be significantly accumulated on designed regions where cells can recognize the protein and spread out. Moreover, the whole device can be easily opened by hand without any loss of patterned cells which could be retrieved by mouth-pipet. Consequently, we demonstrate the possibility of analyzing the difference of gene expression patterns between wild type MCF-7 cell and MCF/Adr (drug-resistant cell line) from less than 400 cells in total for a single comprehensive assay, including parallel experiments, controls, and multiple dose treatments. Certain genes, especially the P-glycoprotein coding gene (ABCB1), show high expression level in resistant cells compared with the wild type, suggesting a possible pathway that may contribute to the antidrug mechanism.

  19. A Comparison of Critical Regimes in Collapsible Tube, Pipe, Open Channel and Gas-Dynamic Flows

    Science.gov (United States)

    Arun, C. P.

    2003-11-01

    Though of considerable interest to clinical scientists, collapsible tubes are only recently receiving due interest by fluid physicists. The subject of critical phenomena in collapsible tube flow appears not to have been examined critically. For example, it has been proposed in the past that shock waves in physiological tubes are abnormal. We propose a classification of flow through collapsible tubes recognising that compressibility in gas-dynamic and pipe flow (cf.waterhammer) corresponds to distensibility in collapsible tube flow. Thus, opening and closing waves of collapsible tube flow (predistension regime) is subcritical flow and the post-distension regime, supercritical. Physiological tubes are often hyperelastic and contractile and often, when distension is very significant, a hypercritical regime corresponding to hypersonic gas-dynamic flow is admissible. Such a hypercritical regime would allow storage of energy and muscle contraction in the wall of the tube and hence continuance of propulsion in the essentially intermittent flow that is seen in collapsible tubes. Such a mechanism appears to be in operation in the human aorta, bowel and urethra. The present work offers a comparison of critical regimes in various fluid flow situations including collapsible tubes, that is in harmony with known phenomena seen in nature.

  20. Open channel block of A-type, kv4.3, and delayed rectifier K+ channels, Kv1.3 and Kv3.1, by sibutramine.

    Science.gov (United States)

    Kim, Sung Eun; Ahn, Hye Sook; Choi, Bok Hee; Jang, Hyun-Jong; Kim, Myung-Jun; Rhie, Duck-Joo; Yoon, Shin-Hee; Jo, Yang-Hyeok; Kim, Myung-Suk; Sung, Ki-Wug; Hahn, Sang June

    2007-05-01

    The effects of sibutramine on voltage-gated K+ channel (Kv)4.3, Kv1.3, and Kv3.1, stably expressed in Chinese hamster ovary cells, were investigated using the whole-cell patch-clamp technique. Sibutramine did not significantly decrease the peak Kv4.3 currents, but it accelerated the rate of decay of current inactivation in a concentration-dependent manner. This phenomenon was effectively characterized by integrating the total current over the duration of a depolarizing pulse to +40 mV. The IC50 value for the sibutramine block of Kv4.3 was 17.3 microM. Under control conditions, the inactivation of Kv4.3 currents could be fit to a biexponential function, and the time constants for the fast and slow components were significantly decreased after the application of sibutramine. The association (k+1) and dissociation (k-1) rate constants for the sibutramine block of Kv 4.3 were 1.51 microM-1s-1 and 27.35 s-1, respectively. The theoretical KD value, derived from k-1/k+1, yielded a value of 18.11 microM. The block of Kv4.3 by sibutramine displayed a weak voltage dependence, increasing at more positive potentials, and it was use-dependent at 2 Hz. Sibutramine did not affect the time course for the deactivating tail currents. Neither steady-state activation and inactivation nor the recovery from inactivation was affected by sibutramine. Sibutramine caused the concentration-dependent block of the Kv1.3 and Kv3.1 currents with an IC50 value of 3.7 and 32.7 microM, respectively. In addition, sibutramine reduced the tail current amplitude and slowed the deactivation of the tail currents of Kv1.3 and Kv3.1, resulting in a crossover phenomenon. These results indicate that sibutramine acts on Kv4.3, Kv1.3, and Kv3.1 as an open channel blocker.

  1. Fast-onset lidocaine block of rat NaV1.4 channels suggests involvement of a second high-affinity open state.

    Science.gov (United States)

    Gingrich, Kevin J; Wagner, Larry E

    2016-06-01

    Local anesthetics (LAs) block resting, open, and inactivated states of voltage-gated Na(+) channels where inactivated states are thought to bind with highest affinity. However, reports of fast-onset block occurring over milliseconds hint at high-affinity block of open channels. Movement of voltage-sensor domain IV-segment 4 (DIVS4) has been associated with high affinity LA block termed voltage-sensor block (VSB) that also leads to a second open state. These observations point to a second high-affinity open state that may underlie fast-onset block. To test for this state, we analyzed the modulation of Na(+) currents by lidocaine and its quaternary derivative (QX222) from heterologously expressed (Xenopus laevis oocytes) rat skeletal muscle μ1 NaV1.4 (rSkM1) with β1 (WT-β1), and a mutant form (IFM-QQQ mutation in the III-IV interdomain, QQQ) lacking fast inactivation, in combination with Markov kinetic gating models. 100 μM lidocaine induced fast-onset (τonset≈2 ms), long-lived (τrecovery≈120 ms) block of WT-β1 macroscopic currents. Lidocaine blocked single-channel and macroscopic QQQ currents in agreement with our previously described mechanism of dual, open-channel block (DOB mechanism). A DOB kinetic model reproduced lidocaine effects on QQQ currents. The DOB model was extended to include trapping fast-inactivation and activation gates, and a second open state (OS2); the latter arising from DIVS4 translocation that precedes inactivation and exhibits high-affinity, lidocaine binding (apparent Kd=25 μM) that accords with VSB (DOB-S2VSB mechanism). The DOB-S2VSB kinetic model predicted fast-onset block of WT-β1. The findings support the involvement of a second, high-affinity, open state in lidocaine modulation of Na(+) channels.

  2. Molecular mechanisms underlying the effect of the novel BK channel opener GoSlo: involvement of the S4/S5 linker and the S6 segment.

    Science.gov (United States)

    Webb, Timothy I; Kshatri, Aravind Singh; Large, Roddy J; Akande, Adebola Morayo; Roy, Subhrangsu; Sergeant, Gerard P; McHale, Noel G; Thornbury, Keith D; Hollywood, Mark A

    2015-02-17

    GoSlo-SR-5-6 is a novel large-conductance Ca(2+)-activated K(+) (BK) channel agonist that shifts the activation V1/2 of these channels in excess of -100 mV when applied at a concentration of 10 μM. Although the structure-activity relationship of this family of molecules has been established, little is known about how they open BK channels. To help address this, we used a combination of electrophysiology, mutagenesis, and mathematical modeling to investigate the molecular mechanisms underlying the effect of GoSlo-SR-5-6. Our data demonstrate that the effects of this agonist are practically abolished when three point mutations are made: L227A in the S4/S5 linker in combination with S317R and I326A in the S6C region. Our data suggest that GoSlo-SR-5-6 interacts with the transmembrane domain of the channel to enhance pore opening. The Horrigan-Aldrich model suggests that GoSlo-SR-5-6 works by stabilizing the open conformation of the channel and the activated state of the voltage sensors, yet decouples the voltage sensors from the pore gate.

  3. Ocular Hypotensive Effects of the ATP-Sensitive Potassium Channel Opener Cromakalim in Human and Murine Experimental Model Systems.

    Directory of Open Access Journals (Sweden)

    Uttio Roy Chowdhury

    Full Text Available Elevated intraocular pressure (IOP is the most prevalent and only treatable risk factor for glaucoma, a leading cause of irreversible blindness worldwide. Unfortunately, all current therapeutics used to treat elevated IOP and glaucoma have significant and sometimes irreversible side effects necessitating the development of novel compounds. We evaluated the IOP lowering ability of the broad spectrum KATP channel opener cromakalim. Cultured human anterior segments when treated with 2 μM cromakalim showed a decrease in pressure (19.33 ± 2.78 mmHg at 0 hours to 13.22 ± 2.64 mmHg at 24 hours; p<0.001 when compared to vehicle treated controls (15.89 ± 5.33 mmHg at 0 h to 15.56 ± 4.88 mmHg at 24 hours; p = 0.89. In wild-type C57BL/6 mice, cromakalim reduced IOP by 18.75 ± 2.22% compared to vehicle treated contralateral eyes (17.01 ± 0.32 mmHg at 0 hours to 13.82 ± 0.37 mmHg at 24 hours; n = 10, p = 0.002. Cromakalim demonstrated an additive effect when used in conjunction with latanoprost free acid, a common ocular hypotensive drug prescribed to patients with elevated IOP. To examine KATP channel subunit specificity, Kir6.2(-/- mice were treated with cromakalim, but unlike wild-type animals, no change in IOP was noted. Histologic analysis of treated and control eyes in cultured human anterior segments and in mice showed similar cell numbers and extracellular matrix integrity within the trabecular meshwork, with no disruptions in the inner and outer walls of Schlemm's canal. Together, these studies suggest that cromakalim is a potent ocular hypotensive agent that lowers IOP via activation of Kir6.2 containing KATP channels, its effect is additive when used in combination with the commonly used glaucoma drug latanoprost, and is not toxic to cells and tissues of the aqueous humor outflow pathway, making it a candidate for future therapeutic development.

  4. Assessing cumulative watershed stressors: Using LIDAR to assess the amount of open lands and young forest associated with in-channel erosion for North Shore tributaries

    Science.gov (United States)

    Hydrologists with the US Forest Service have demonstrated the cumulative impacts of land use change, particularly additional open lands and young forest (< 15 yrs) on bank full flows and in-channel erosion. Mapping these impacts has been difficult due to challenges associated ...

  5. Redistribution of velocity and bed-shear stress in straight and curved open channels by means of a bubble screen: laboratory experiments

    NARCIS (Netherlands)

    Blanckaert, K.; Buschman, F.A.; Schielen, R.; Wijbenga, J.H.A.

    2008-01-01

    Open-channel beds show variations in the transverse direction due to the interaction between downstream flow, cross-stream flow, and bed topography, which may reduce the navigable width or endanger the foundations of structures. The reported preliminary laboratory study shows that a bubble screen ca

  6. Size effects on the open probability of two-state ion channel system in cell membranes using microcanonical formalism based on gamma function

    Science.gov (United States)

    Erdem, Riza; Aydiner, Ekrem

    2016-08-01

    Ion channel systems are a class of proteins that reside in the membranes of all biological cells and forms conduction pores that regulate the transport of ions into and out of cells. They can be investigated theoretically in the microcanonical formalism since the number of accessible states can be easily evaluated by using the Stirling approximation to deal with factorials. In this work, we have used gamma function (Γ (n)) to solve the two-state or open-close channel model without any approximation. New values are calculated for the open probability (p0) and the relative error between our numerical results and the approximate one using Stirling formula is presented. This error (p0 app — p0)/p0 is significant for small channel systems.

  7. Crystal Structure of Inhibitor-Bound P450BM-3 Reveals Open Conformation of Substrate Access Channel

    Energy Technology Data Exchange (ETDEWEB)

    Haines, Donovan C.; Chen, Baozhi; Tomchick, Diana R.; Bondlela, Muralidhar; Hegde, Amita; Machius, Mischa; Peterson, Julian A. (Texas); (UTSMC)

    2008-08-19

    P450BM-3 is an extensively studied P450 cytochrome that is naturally fused to a cytochrome P450 reductase domain. Crystal structures of the heme domain of this enzyme have previously generated many insights into features of P450 structure, substrate binding specificity, and conformational changes that occur on substrate binding. Although many P450s are inhibited by imidazole, this compound does not effectively inhibit P450BM-3. {omega}-Imidazolyl fatty acids have previously been found to be weak inhibitors of the enzyme and show some unusual cooperativity with the substrate lauric acid. We set out to improve the properties of these inhibitors by attaching the {omega}-imidazolyl fatty acid to the nitrogen of an amino acid group, a tactic that we used previously to increase the potency of substrates. The resulting inhibitors were significantly more potent than their parent compounds lacking the amino acid group. A crystal structure of one of the new inhibitors bound to the heme domain of P450BM-3 reveals that the mode of interaction of the amino acid group with the enzyme is different from that previously observed for acyl amino acid substrates. Further, required movements of residues in the active site to accommodate the imidazole group provide an explanation for the low affinity of imidazole itself. Finally, the previously observed cooperativity with lauric acid is explained by a surprisingly open substrate-access channel lined with hydrophobic residues that could potentially accommodate lauric acid in addition to the inhibitor itself.

  8. DNS of horizontal open channel flow with finite-size, heavy particles at low solid volume fraction

    CERN Document Server

    Kidanemariam, Aman G; Doychev, Todor; Uhlmann, Markus

    2013-01-01

    We have performed direct numerical simulation of turbulent open channel flow over a smooth horizontal wall in the presence of finite-size, heavy particles. The spherical particles have a diameter of approximately 7 wall units, a density of 1.7 times the fluid density and a solid volume fraction of 0.0005. The value of the Galileo number is set to 16.5, while the Shields parameter measures approximately 0.2. Under these conditions, the particles are predominantly located in the vicinity of the bottom wall, where they exhibit strong preferential concentration which we quantify by means of Voronoi analysis and by computing the particle-conditioned concentration field. As observed in previous studies with similar parameter values, the mean streamwise particle velocity is smaller than that of the fluid. We propose a new definition of the fluid velocity "seen" by finite-size particles based on an average over a spherical surface segment, from which we deduce in the present case that the particles are instantaneousl...

  9. Hypoxic pulmonary hypertension and novel ATP-sensitive potassium channel opener: the new hope on the horizon

    Institute of Scientific and Technical Information of China (English)

    Yu JIN; Wei-ping XIE; Hong WANG

    2012-01-01

    Hypoxic pulmonary hypertension (HPH) is a syndrome characterized by the increase of pulmonary vascular tone and the structural remodeling of peripheral pulmonary arteries.The aim of specific therapies for hypoxic pulmonary hypertension is to reduce pulmonary vascular resistance,reverse pulmonary vascular remodeling,and thereby improving right ventricular function.Iptakalim,a lipophilic para-amino compound with a low molecular weight,has been demonstrated to be a new selective ATP-sensitive potassium (KATP) channel opener via pharmacological,electrophysiological,biochemical studies,and receptor binding tests.In hypoxia-induced animal models,iptakalim decreases the elevated mean pressure in pulmonary arteries,and attenuates remodeling in the right ventricle,pulmonary arteries and airways.Furthermore,iptakalim has selective antihypertensive effects,selective vasorelaxation effects on smaller arteries,and protective effects on endothelial cells,but no effects on the central nervous,respiratory,digestive or endocrine systems at therapeutic dose.Our previous studies demonstrated that iptakalim inhibited the effects of endothelin-1,reduced the intracellular calcium concentration and inhibited the proliferation of pulmonary artery smooth muscle cells.Since iptakalim has been shown safe and effective in both experimental animal models and phase I clinical trials,it can be a potential candidate of HPH in the future.

  10. On the exact analytical solution for the spatial moments of the cross-sectional average concentration in open channel flows

    Science.gov (United States)

    Pannone, Marilena

    2012-08-01

    This paper shows how an exact analytical solution for the transient-state spatial moments of the cross-sectional average tracer concentration in large open channel flows can be derived from the depth-averaged advection-diffusion equation resorting to the method of Green's functions, without any simplifying assumption about the regularity of the actual concentration field, the smallness of the fluctuations, or the large space-time scale of variation of the average concentration gradient (justifying the a priori localization of the problem), which were the basis of the classic Taylor dispersion theory. The results reveal that in agreement with the findings by Aris (1956) and later by others for flows within a conduit, there are an initial centroid displacement and a variance deficit dependent on the specific position and dimension of the initial injection. The second central moment asymptotically tends to the linearly increasing function predictable on the basis of Taylor's classic theory, and the skewness, which is constantly zero for the cross-sectionally uniform injection, in the case of nonuniform initial distributions tends to slowly vanish after having reached a maximum. Thus, the persistent asymmetry exhibited by the field concentration data, as well as the retardations and the accelerations in the peak trajectory, can be justified without making any a priori assumption about the physical mechanism underlying their appearance, like transient storage phenomena, just by rigorously solving the governing equation for the cross-sectional average concentration in the presence of nonuniform, asymmetrically located solute injections.

  11. Coastline changes and sedimentation related with the opening of an artificial channel: the Valo Grande Delta, SE Brazil.

    Science.gov (United States)

    De Mahiques, Michel M; Figueira, Rubens C L; Alves, Daniel P V; Italiani, Diana M; Martins, Cristina C; Dias, João M A

    2014-12-01

    The role played by human activity in coastline changes indicates a general tendency of retreating coasts, especially deltaic environments, as a result of the recent trend of sea level rise as well as the blockage of the transfer of sediments towards the coast, especially due to the construction of dams. This is particularly important in deltaic environments which have been suffering a dramatic loss of area in the last decades. In contrast, in this paper, we report the origin and evolution of an anthropogenic delta, the Valo Grande delta, on the south-eastern Brazilian coast, whose origin is related to the opening of an artificial channel and the diversion of the main flow of the Ribeira de Iguape River. The methodology included the analysis of coastline changes, bathymetry and coring, which were used to determine the sedimentation rates and grain-size changes over time. The results allowed us to recognize the different facies of the anthropogenic delta and establish its lateral and vertical depositional trends. Despite not being very frequent, anthropogenic deltas represent a favorable environment for the record of natural and anthropogenic changes in historical times and, thus, deserve more attention from researchers of different subjects.

  12. KR-31378, a potassium-channel opener, induces the protection of retinal ganglion cells in rat retinal ischemic models.

    Science.gov (United States)

    Choi, Anho; Choi, Jun-Sub; Yoon, Yone-Jung; Kim, Kyung-A; Joo, Choun-Ki

    2009-04-01

    KR-31378 is a newly developed K(ATP)-channel opener. To investigate the ability of KR-31378 to protect retinal ganglion cells (RGC), experiments were conducted using two retinal ischemia models. Retinal ischemia was induced by transient high intraocular pressure (IOP) for acute ischemia and by three episcleral vein occlusion for chronic retinal ischemia. KR-31378 was injected intraperitoneally and administered orally in the acute and chronic ischemia models, respectively. Under the condition of chronic ischemia, RGC density in the KR-31378-treated group was statistically higher than that in the non-treated group, and IOP was reduced. In the acute retinal ischemia model, 90% of RGC were degenerated after one week in non-treated retina, but, RGC in KR-31378-treated retina were protected from ischemic damage in a dose-dependent manner and showed inhibited glial fibrillary acidic protein (GFAP) expression. Furthermore, the KR-31378 protective effect was inhibited by glibenclamide treatment in acute ischemia. These findings indicate that systemic KR-31378 treatment may protect against ischemic injury-induced ganglion cell loss in glaucoma.

  13. Effects of the shape of the hydrograph and unsteadiness on flow properties and hysteresis in open channel flow

    Science.gov (United States)

    Bagherimiyab, F.; Roy, A.; Lemmin, U.

    2013-12-01

    Flows in rivers and open channels become unsteady during flood events. This study examines experimentally the relationships between the shape of the hydrographs and the characteristics of the accelerating, stabilizing and decelerating phases and the hysteretic trajectories. Seven symmetrical hydrographs with different unsteadiness (20 s, 30 s, 45 s, 60 s, 90 s, 150 s and 210 s accelerating and decelerating phases) and 90 s peak steady range were investigated in open-channel flow over a loose gravel bed. Detailed, quasi-instantaneous velocity profiles were measured using a 3D Acoustic Doppler Velocity Profiler (ADVP). Even though discharge was varied linearly at a constant rate over the rising and falling limb of each hydrograph, the change in relative submergence was not linear during parts of these periods. Important variations were observed between the two limbs of the hydrographs, but also among the different unsteadiness conditions, resulting in considerable differences in the flow dynamics. The discrepancy between the variation of the discharge and the observed water level over time indicates that flow adjustment over the rough bed takes place along the channel. This adjustment differs for the accelerating and the decelerating phases. Different hysteretic loops are formed for each hydrograph. In each loop, water depth for the accelerating range is different from that of the decelerating range for the same discharge. The transition from the accelerating range to the peak flow range is gradual. It is particularly marked for the 20 s hydrograph, where steady state peak flow is only attained at the very end of the peak flow range. The hydrograph with the lowest unsteadiness (210 s) remains in steady state during the whole peak steady flow range. Compared to the other hydrographs, it is characterized by a higher water depth for the same discharge and at the end it reaches a lower water depth for the same discharge. During the accelerating range, both mean velocity

  14. Channel-opening kinetic mechanism for human wild-type GluK2 and the M867I mutant kainate receptor.

    Science.gov (United States)

    Han, Yan; Wang, Congzhou; Park, Jae Seon; Niu, Li

    2010-11-02

    GluK2 is a kainate receptor subunit that is alternatively spliced at the C-terminus. Previous studies implicated GluK2 in autism. In particular, the methionine-to-isoleucine replacement at amino acid residue 867 (M867I) that can only occur in the longest isoform of the human GluK2 (hGluK2), as the disease (autism) mutation, is thought to cause gain-of-function. However, the kinetic properties of the wild-type hGluK2 and the functional consequence of this gain-of-function mutation at the molecular level are not well understood. To investigate whether the M867I mutation affects the channel properties of the human GluK2 kainate receptor, we have systematically characterized the rate and the equilibrium constants pertinent to channel opening and channel desensitization for this mutant and the wild-type hGluK2 receptor, along with the wild-type rat GluK2 kainate receptor (rGluK2) as the control. Our results show that the M867I mutation does not affect either the rate or the equilibrium constants of the channel opening but does slow down the channel desensitization rate by ~1.6-fold at saturating glutamate concentrations. It is possible that a consequence of this mutation on the desensitization rate is linked to facilitating the receptor trafficking and membrane expression, given the close proximity of M867 to the forward trafficking motif in the C-terminal sequence. By comparing the kinetic data of the wild-type human and rat GluK2 receptors, we also find that the human GluK2 has a ~3-fold smaller channel-opening rate constant but an identical channel-closing rate constant and thus a channel-opening probability of 0.85 vs 0.96 for rGluK2. Furthermore, the intrinsic equilibrium dissociation constant K(1) for hGluK2, like the EC(50) value, is ~2-fold lower than rGluK2. Our results therefore suggest that the human GluK2 is relatively a slowly activating channel but more sensitive to glutamate, as compared to the rat ortholog, despite the fact that the human and rat forms

  15. Oral administration of the KATP channel opener diazoxide ameliorates disease progression in a murine model of multiple sclerosis

    Directory of Open Access Journals (Sweden)

    Mahy Nicole

    2011-11-01

    Full Text Available Abstract Background Multiple Sclerosis (MS is an acquired inflammatory demyelinating disorder of the central nervous system (CNS and is the leading cause of nontraumatic disability among young adults. Activated microglial cells are important effectors of demyelination and neurodegeneration, by secreting cytokines and others neurotoxic agents. Previous studies have demonstrated that microglia expresses ATP-sensitive potassium (KATP channels and its pharmacological activation can provide neuroprotective and anti-inflammatory effects. In this study, we have examined the effect of oral administration of KATP channel opener diazoxide on induced experimental autoimmune encephalomyelitis (EAE, a mouse model of MS. Methods Anti-inflammatory effects of diazoxide were studied on lipopolysaccharide (LPS and interferon gamma (IFNγ-activated microglial cells. EAE was induced in C57BL/6J mice by immunization with myelin oligodendrocyte glycoprotein peptide (MOG35-55. Mice were orally treated daily with diazoxide or vehicle for 15 days from the day of EAE symptom onset. Treatment starting at the same time as immunization was also assayed. Clinical signs of EAE were monitored and histological studies were performed to analyze tissue damage, demyelination, glial reactivity, axonal loss, neuronal preservation and lymphocyte infiltration. Results Diazoxide inhibited in vitro nitric oxide (NO, tumor necrosis factor alpha (TNF-α and interleukin-6 (IL-6 production and inducible nitric oxide synthase (iNOS expression by activated microglia without affecting cyclooxygenase-2 (COX-2 expression and phagocytosis. Oral treatment of mice with diazoxide ameliorated EAE clinical signs but did not prevent disease. Histological analysis demonstrated that diazoxide elicited a significant reduction in myelin and axonal loss accompanied by a decrease in glial activation and neuronal damage. Diazoxide did not affect the number of infiltrating lymphocytes positive for CD3 and CD20

  16. On the Effect of Aspect Ratio of Open Heated Channel Including an Active Obstacle upon the Turbulent Characteristics of a Thermal Plume: Experimental Analysis

    Directory of Open Access Journals (Sweden)

    Taoufik Naffouti

    2016-01-01

    Full Text Available This paper reports an experimental investigation of aspect ratio effect of open vertical channel on turbulent characteristics of a thermal plume. The physical configuration is constituted essentially by a prallelepipedic channel and an obstacle of a rectangular section. The thermal plume is generated by a rectangular obstacle heated uniformly at the upper surface. This active source is placed at the entry of a vertical channel open at the ends. The symmetrical heating of channel walls by joule effect and by thermal radiation emitted by the plume, causes the appearance of a thermosiphon flow which interacts with this one. To investigate the flow fluctuations, an anemometer at constant current (CCA is used. The results carried out with air (Pr = 0.71 are performed for Rayleigh number equal to 0.63 107 over a wide range of aspect ratio 1.25 ≤ A ≤ 30. Effects of this pertinent parameter are displayed upon thermal and dynamic turbulent fields. Using Taylor hypothesis, time and length scales of turbulent thermal field are studied. It is found that the turbulent characteristics of the flow are significantly influenced by the variation of aspect ratio. An optimum aspect ratio of channel characterized by a strong homogenization of turbulence of the flow is observed. The fine analysis of temperature fluctuations spectra shows the evolution of the vortices in energy cascade owing to the strong effect of thermosiphon flow which favours the vortex stretching.

  17. Inherited macular degeneration-associated mutations in CNGB3 increase the ligand sensitivity and spontaneous open probability of cone cyclic nucleotide-gated channels

    Science.gov (United States)

    Meighan, Peter C.; Peng, Changhong; Varnum, Michael D.

    2015-01-01

    Cyclic nucleotide gated (CNG) channels are a critical component of the visual transduction cascade in the vertebrate retina. Mutations in the genes encoding these channels have been associated with a spectrum of inherited retinal disorders. To gain insight into their pathophysiological mechanisms, we have investigated the functional consequences of several CNGB3 mutations, previously associated with macular degeneration (Y469D and L595F) or complete achromatopsia (S156F, P309L, and G558C), by expressing these subunits in combination with wild-type CNGA3 in Xenopus oocytes and characterizing them using patch-clamp recordings in the inside-out configuration. These mutations did not prevent the formation of functional heteromeric channels, as indicated by sensitivity to block by L-cis-diltiazem. With the exception of S156F, each of the mutant channels displayed electrophysiological properties reflecting enhanced channel activity at physiological concentrations of cGMP (i.e., a gain-of-function phenotype). The increased channel activity produced by these mutations resulted from either increased functional expression levels, or increased sensitivity to cyclic nucleotides. Furthermore, L595F increased the spontaneous open probability in the absence of activating ligand, signifying a ligand independent gain-of-function change. In addition to the CNGB3 disease-associate mutations, we characterized the effects of several common CNGB3 and CNGA3 single-nucleotide polymorphisms (SNPs) on heteromeric CNGA3+CNGB3 channel function. Two of the SNPs examined (A3-T153M, and B3-W234C) produced decreased ligand sensitivity for heteromeric CNG channels. These changes may contribute to background disease susceptibility when combined with other genetic or non-genetic factors. Together, these studies help to define the underlying molecular phenotype for mutations relating to CNG channel disease pathogenesis. PMID:26106334

  18. Inherited macular degeneration-associated mutations in CNGB3 increase the ligand sensitivity and spontaneous open probability of cone cyclic nucleotide-gated channels.

    Directory of Open Access Journals (Sweden)

    Peter eMeighan

    2015-06-01

    Full Text Available Cyclic nucleotide gated (CNG channels are a critical component of the visual transduction cascade in the vertebrate retina. Mutations in the genes encoding these channels have been associated with a spectrum of inherited retinal disorders. To gain insight into their pathophysiological mechanisms, we have investigated the functional consequences of several CNGB3 mutations, previously associated with macular degeneration (Y469D and L595F or complete achromatopsia (S156F, P309L, and G558C, by expressing these subunits in combination with wild-type CNGA3 in Xenopus oocytes and characterizing them using patch-clamp recordings in the inside-out configuration. These mutations did not prevent the formation of functional heteromeric channels, as indicated by sensitivity to block by L-cis-diltiazem. With the exception of S156F, each of the mutant channels displayed electrophysiological properties reflecting enhanced channel activity at physiological concentrations of cGMP (i.e., a gain-of-function phenotype. The increased channel activity produced by these mutations resulted from either increased functional expression levels, or increased sensitivity to cyclic nucleotides. Furthermore, L595F increased the spontaneous open probability in the absence of activating ligand, signifying a ligand independent gain-of-function change. In addition to the CNGB3 disease-associate mutations, we characterized the effects of several common CNGB3 and CNGA3 single-nucleotide polymorphisms (SNPs on heteromeric CNGA3+CNGB3 channel function. Two of the SNPs examined (A3-T153M, and B3-W234C produced decreased ligand sensitivity for heteromeric CNG channels. These changes may contribute to background disease susceptibility when combined with other genetic or nongenetic factors. Together, these studies help to define the underlying molecular phenotype for mutations relating to CNG channel disease pathogenesis.

  19. 3D Lagrangian Model of Particle Saltation in an Open Channel Flow with Emphasis on Particle-Particle Collisions

    Science.gov (United States)

    Moreno, P. A.; Bombardelli, F. A.

    2012-12-01

    Particles laying motionless at the bed of rivers, lakes and estuaries can be put into motion when the shear stress exerted by the flow on the particles exceeds the critical shear stress. When these particles start their motion they can either remain suspended by long periods of time (suspended load) or move close to the bed (bed load). Particles are transported as bed load in three different modes: Sliding, rolling and saltation. Saltation is usually described as the bouncing motion of sediment particles in a layer a few particle diameters thick. The amount of particles and the bed-load mode in which they move depend on the particle size and density, and the flow intensity, usually quantified by the shear velocity. The bottom shear stress in natural streams will most likely be large enough to set saltation as the most important bed-load transport mechanism among all three modes. Thus, studying the saltation process is crucial for the overall understanding of bed-load transport. Particularly, numerical simulations of this process have been providing important insight regarding the relative importance of the physical mechanisms involved in it. Several processes occur when particles are saltating near the bed: i) Particles collide with the bed, ii) they "fly" between collisions with the bed, as a result of their interaction with the fluid flow, iii) and they collide among themselves. These processes can be simulated using a three-dimensional Eulerian-Lagrangian model. In order to mimic these processes we have experimented with an averaged turbulent flow field represented by the logarithmic law of the wall, and with a more involved approach in which a computed turbulent velocity field for a flat plate was used as a surrogate of the three-dimensional turbulent conditions present close to stream beds. Since flat-plate and open-channel boundary layers are essentially different, a dynamic similarity analysis was performed showing that the highly-resolved three

  20. The 3.5 ångström X-ray structure of the human connexin26 gap junction channel is unlikely that of a fully open channel.

    Science.gov (United States)

    Zonta, Francesco; Polles, Guido; Sanasi, Maria Federica; Bortolozzi, Mario; Mammano, Fabio

    2013-02-27

    The permeability of gap junction channels to metabolites, and not simply to small inorganic ions, is likely to play an important role in development, physiology as well as in etiology of several diseases. Here, we combined dual patch clamp and fluorescence imaging techniques with molecular dynamics (MD) simulations to investigate the permeation of calcein, a relatively large fluorescent tracer (MW 622 Da) through homomeric gap junction channels formed by wild type human connexin26 (hCx26wt) protomers. Our experimental data indicate that the unitary flux of calcein driven by a 125 μM concentration difference is Jpore = 226 molecule/s per channel. In the light of Eyring transition state theory adapted for the liquid phase, this value corresponds to an energy barrier of ~20 kBT (where kB is the Boltzmann constant and T is absolute temperature). The barrier predicted by our MD simulations, based on the 3.5 Å X-ray structural model of the hCx26wt gap junction channel, is ~45 kBT. The main contributions to the energetics of calcein permeation originated from the interaction between the permeating molecule and the charged aminoacids lining the channel pore. Assigning a fake zero total charge to the calcein molecule yielded a value for the barrier height compatible with the experimental data. These results can be accounted for by two different (although not mutually exclusive) hypotheses: (1) the X-ray model of the hCx26wt gap junction channel is not representative of a fully open state; (2) post translational modifications affecting the hCx26wt protein in our expression system differed from the modifications undergone by the proteins in the conditions used to obtain the crystal structure. Hypothesis (1) is compatible with data indicating that, only 10% or less of the channels forming a gap junction plaque are in the open state, and therefore the averaging procedure intrinsic in the generation of the crystal structure data more closely reflects that of a closed

  1. A mechanism for the auto-inhibition of hyperpolarization-activated cyclic nucleotide-gated (HCN) channel opening and its relief by cAMP.

    Science.gov (United States)

    Akimoto, Madoka; Zhang, Zaiyong; Boulton, Stephen; Selvaratnam, Rajeevan; VanSchouwen, Bryan; Gloyd, Melanie; Accili, Eric A; Lange, Oliver F; Melacini, Giuseppe

    2014-08-01

    Hyperpolarization-activated cyclic nucleotide-gated (HCN) ion channels control neuronal and cardiac electrical rhythmicity. There are four homologous isoforms (HCN1-4) sharing a common multidomain architecture that includes an N-terminal transmembrane tetrameric ion channel followed by a cytoplasmic "C-linker," which connects a more distal cAMP-binding domain (CBD) to the inner pore. Channel opening is primarily stimulated by transmembrane elements that sense membrane hyperpolarization, although cAMP reduces the voltage required for HCN activation by promoting tetramerization of the intracellular C-linker, which in turn relieves auto-inhibition of the inner pore gate. Although binding of cAMP has been proposed to relieve auto-inhibition by affecting the structure of the C-linker and CBD, the nature and extent of these cAMP-dependent changes remain limitedly explored. Here, we used NMR to probe the changes caused by the binding of cAMP and of cCMP, a partial agonist, to the apo-CBD of HCN4. Our data indicate that the CBD exists in a dynamic two-state equilibrium, whose position as gauged by NMR chemical shifts correlates with the V½ voltage measured through electrophysiology. In the absence of cAMP, the most populated CBD state leads to steric clashes with the activated or "tetrameric" C-linker, which becomes energetically unfavored. The steric clashes of the apo tetramer are eliminated either by cAMP binding, which selects for a CBD state devoid of steric clashes with the tetrameric C-linker and facilitates channel opening, or by a transition of apo-HCN to monomers or dimer of dimers, in which the C-linker becomes less structured, and channel opening is not facilitated.

  2. Substitutions at the opening of the Rubisco central solvent channel affect holoenzyme stability and CO2/O 2 specificity but not activation by Rubisco activase.

    Science.gov (United States)

    Esquivel, M Gloria; Genkov, Todor; Nogueira, Ana S; Salvucci, Michael E; Spreitzer, Robert J

    2013-12-01

    Ribulose-1,5-bisphosphate carboxylase/oxygenase (Rubisco) catalyzes the initial step of carbon metabolism in photosynthesis. The holoenzyme comprises eight large subunits, arranged as a tetramer of dimers around a central solvent channel that defines a fourfold axis of symmetry, and eight small subunits, arranged as two tetramers at the poles of the axis. The phylogenetically divergent small-subunit loops between β-strands A and B form the entrance to the solvent channel. In the green alga Chlamydomonas reinhardtii, Ile-58 from each of the four small-subunit βA-βB loops defines the minimal diameter of the channel opening. To understand the role of the central solvent channel in Rubisco function, directed mutagenesis and transformation of Chlamydomonas were employed to replace Ile-58 with Ala, Lys, Glu, Trp, or three Trp residues (I58W3) to close the entrance to the channel. The I58E, I58K, and I58W substitutions caused only small decreases in photosynthetic growth at 25 and 35 °C, whereas I58W3 had a substantial effect at both temperatures. The mutant enzymes had decreased carboxylation rates, but the I58W3 enzyme had decreases in both carboxylation and CO2/O2 specificity. The I58E, I58W, and I58W3 enzymes were inactivated at lower temperatures than wild-type Rubisco, and were degraded at slower rates under oxidative stress. However, these mutant enzymes were activated by Rubisco activase at normal rates, indicating that the structural transition required for carboxylation is not affected by altering the solvent channel opening. Structural dynamics alone may not be responsible for these distant effects on the Rubisco active site.

  3. Statistical analysis of turbulent super-streamwise vortices based on observations of streaky structures near the free surface in the smooth open channel flow

    Science.gov (United States)

    Zhong, Qiang; Chen, Qigang; Wang, Hao; Li, Danxun; Wang, Xingkui

    2016-05-01

    Long streamwise-elongated high- and low-speed streaks are repeatedly observed near the free surface in open channel flows in natural rivers and lab experiments. Super-streamwise vortex model has been proposed to explain this widespread phenomenon for quite some time. However, statistical evidence of the existence of the super-streamwise vortices as one type of coherent structures is still insufficient. Correlation and proper orthogonal decomposition (POD) analysis based on PIV experimental data in the streamwise-spanwise plane near the free surface in a smooth open channel flow are employed to investigate this topic. Correlation analysis revealed that the streaky structures appear frequently near the free surface and their occurrence probability at any spanwise position is equal. The spanwise velocity fluctuation usually flows from low-speed streaks toward high-speed streaks. The average spanwise width and spacing between neighboring low (or high) speed streaks are approximately h and 2h respectively. POD analysis reveals that there are streaks with different spanwise width in the instantaneous flow fields. Typical streamwise rotational movement can be sketched out directly based on the results from statistical analyses. Point-by-point analysis indicates that this pattern is consistent everywhere in the measurement window and is without any inhomogeneity in the spanwise direction, which reveals the essential difference between coherent structures and secondary flow cells. The pattern found by statistical analysis is consistent with the notion that the super-streamwise vortices exist universally as one type of coherent structure in open channel flows.

  4. Cystic fibrosis transmembrane conductance regulator (CFTR) potentiator VX-770 (ivacaftor) opens the defective channel gate of mutant CFTR in a phosphorylation-dependent but ATP-independent manner.

    Science.gov (United States)

    Eckford, Paul D W; Li, Canhui; Ramjeesingh, Mohabir; Bear, Christine E

    2012-10-26

    The cystic fibrosis transmembrane conductance regulator (CFTR) acts as a channel on the apical membrane of epithelia. Disease-causing mutations in the cystic fibrosis gene can lead to CFTR protein misfolding as in the case of the F508del mutation and/or channel dysfunction. Recently, a small molecule, VX-770 (ivacaftor), has shown efficacy in restoring lung function in patients bearing the G551D mutation, and this has been linked to repair of its channel gating defect. However, these studies did not reveal the mechanism of action of VX-770 in detail. Normally, CFTR channel activity is regulated by phosphorylation, ATP binding, and hydrolysis. Hence, it has been hypothesized that VX-770 modifies one or more of these metabolic events. In this study, we examined VX-770 activity using a reconstitution system for purified CFTR protein, a system that enables control of known regulatory factors. We studied the consequences of VX-770 interaction with CFTR incorporated in planar lipid bilayers and in proteoliposomes, using a novel flux-based assay. We found that purified and phosphorylated CFTR was potentiated in the presence of Mg-ATP, suggesting that VX-770 bound directly to the CFTR protein, rather than associated kinases or phosphatases. Interestingly, we also found that VX-770 enhanced the channel activity of purified and mutant CFTR in the nominal absence of Mg-ATP. These findings suggest that VX-770 can cause CFTR channel opening through a nonconventional ATP-independent mechanism. This work sets the stage for future studies of the structural properties that mediate CFTR gating using VX-770 as a probe.

  5. Performance of an open limestone channel for treating a stream affected by acid rock drainage (León, Spain).

    Science.gov (United States)

    Santofimia, Esther; López-Pamo, Enrique

    2016-07-01

    The generation of acid rock drainage (ARD) was observed after the oxidation dissolution of pyrite-rich black shales, which were excavated during the construction of a highway in León (Spain). ARDs are characterized by the presence of high concentrations of sulfate and metals (Al, Fe, Mn, Zn, Cu, Co, Ni, Th, and U) that affect the La Silva stream. Dissolved element concentrations showed values between one and four orders of magnitude higher than those of natural waters of this area. A passive treatment system was constructed; the aim of which was to improve the quality of the water of the stream. This work provides a hydrochemical characterization of the La Silva stream after its transit through the different elements that constitute the passive treatment system (open limestone channel (OLC), small ponds, and a wetland), during its first year of operation. The passive treatment system has two sections separated by a tunnel 230 m long. The first section, which stretches between the highway and the tunnel entrance, is an OLC 350 m long with a slope of 16 %. The second section, which stretches from the tunnel exit to the end wetland, has a length of 700 m and a slope of 6 %; it is in this section where six small ponds are located. In the first section of this passive treatment system, the OLC was effectively increasing the pH from 3 to 4-4.5 and eliminating all of the dissolved Fe and the partially dissolved Al. These elements, after hydrolysis at a pH 3-3.5 and 4-4.5, respectively, had precipitated as schwertmannite and hydrobasaluminite, while other dissolved metals were removed totally or partially for adsorption by the precipitates and/or by coprecipitation. The second section receives different inputs of water such as ARDs and natural waters. After exiting the treatment system, the stream is buffered by Al at a pH of 4-4.3, showing high Al concentrations (19-101 mg/L) but with a complete removal of dissolved Fe. Unfortunately, the outflow shows similar or

  6. 2-(1-Hexyn-1-yl)adenosine-induced intraocular hypertension is mediated via K+ channel opening through adenosine A2A receptor in rabbits.

    Science.gov (United States)

    Konno, Takashi; Uchibori, Takehiro; Nagai, Akihiko; Kogi, Kentaro; Nakahata, Norimichi

    2005-08-22

    The present study was performed to clarify the mechanism of change in intraocular pressure by 2-(1-hexyn-1-yl)adenosine (2-H-Ado), a selective adenosine A2 receptor agonist, in rabbits. 2-H-Ado (0.1%, 50 microl)-induced ocular hypertension (E(max): 7.7 mm Hg) was inhibited by an adenosine A2A receptor antagonist 1,3,7-trimethyl-8-(3-chlorostyryl)xanthine, ATP-sensitive K+ channel blocker glibenclamide or 5-hydroxydecanoic acid, but not by an adenosine A1 receptor antagonist 8-cyclopentyl-1,3-dipropylxanthine, an adenosine A2B receptor antagonist alloxazine or a cyclooxygenase inhibitor indomethacin. The outflow facility induced by 2-H-Ado seems to be independent of increase in intraocular pressure or ATP-sensitive K+ channel. In contrast, the recovery rate in intraocular pressure decreased by hypertonic saline was accelerated by 2-H-Ado, and this response was dependent on ATP-sensitive K+ channel. These results suggest that 2-H-Ado-induced ocular hypertension is mediated via K+ channel opening through adenosine A2A receptor, and this is probably due to aqueous formation, but independent of change in outflow facility or prostaglandin production.

  7. Theoretical analysis and numerical simulation of mechanical energy loss and wall resistance of steady open channel flow

    Institute of Scientific and Technical Information of China (English)

    刘士和; 薛娇

    2016-01-01

    The mechanical energy loss and the wall resistance are very important in practical engineering. These problems are investigated through theoretical analysis and numerical simulation in this paper. The results are as follows. (1) A new mechanical energy equation for the total flow is obtained, and a general formula for the calculation of the mechanical energy loss is proposed. (2) The general relationship between the wall resistance and the mechanical energy loss for the steady channel flow is obtained, the simplified form of which for the steady uniform channel flow is in consistent with the formula used in Hydraulics deduced byπ theorem and dimensional analysis. (3) The steady channel flow over a backward facing step with a small expansion ratio is numerica- lly simulated, and the mechanical energy loss, the wall resistance as well as the relationship between the wall resistance and the mechanical energy loss are calculated and analyzed.

  8. Three-Dimensional Simulation of High Reynolds Turbulent Flows in a Rectangular Open Channel with the Presence of a Disruptive Element (Obstacles Transversely

    Directory of Open Access Journals (Sweden)

    Boudiaf H’ssine

    2015-03-01

    Full Text Available This study aims at describing a three-dimensional simulation of a turbulent flow with a high Reynolds number in a rectangular open channel with the presence of a disruptive element (obstacles transversely. The numerical study is based on measuring the flow velocity in two directions, i.e., horizontal and vertical, in four planes located near the obstacle built across a simulated channel. For the modeling of the free surface, a Volume Of Fluid (VOF multiphase flow model is used. In the present case, namely a study of turbulence, three numerical models are compared, a k-ε standard, a k-w standard and a Reynolds Stress Model (RSM. The verification of the simulation results has allowed us to show the advantages of the Reynolds stress model. This model is more representative of the phenomena of an intense vortex flow in the presence of obstacles, especially in drainage systems.

  9. Design of Mine-used Ultrasonic Open-channel Flowmeter%矿用超声波明渠流量计的设计

    Institute of Scientific and Technical Information of China (English)

    徐乐年; 刘伟光; 王全

    2011-01-01

    针对矿井水中含有的煤粉、泥沙等杂质淤积在明渠流量计探头表面而使其无法正常工作的问题,设计了一种基于M-Bus的矿用超声波明渠流量计.该流量计由量水堰槽、智能超声波流量传感器组成,选定量水堰槽可确定实时流量与实测水头高度的关系式,通过智能超声波流量传感器测出水头高度即可计算出明渠的实时流量.实际应用表明,该流量计具有测量准确、可靠性高、操作简单等优点.%In view of problem that open-channel flowmeter can't work normally because mine water contains impurities of coal powder and sediment which deposit on surface of probe of open-channel flowmeter, a mine-used ultrasonic open-channel flowmeter based on M-Bus was designed.The flowmeter is composed of water-level weir slot and intelligent ultrasonic flow sensor, which can get formula between real-time flow and measured height of water head by water-level weir slot and calculate real-time flow by intelligent ultrasonic flow sensor to measure height of water head.The actual application showed that the flowmeter has advantages of accurate measurement, high reliability and simple operation.

  10. Computational analysis of the effects of the hERG channel opener NS1643 in a human ventricular cell model

    DEFF Research Database (Denmark)

    Peitersen, Torben; Grunnet, Morten; Benson, Alan P

    2008-01-01

    BACKGROUND: Dysfunction or pharmacologic inhibition of repolarizing cardiac ionic currents can lead to fatal arrhythmias. The hERG potassium channel underlies the repolarizing current I(Kr), and mutations therein can produce both long and short QT syndromes (LQT2 and SQT1). We previously reported...... on the diphenylurea compound NS1643, which acts on hERG channels in two distinct ways: by increasing overall conductance and by shifting the inactivation curve in the depolarized direction. OBJECTIVE: The purpose of this study was to determine which of the two components contributes more to the antiarrhythmic effects...... of NS1643 under normokalemic and hypokalemic conditions. METHODS: The study consisted of mathematical simulation of action potentials in a human ventricular ionic cell model in single cell and string of 100 cells. RESULTS: Regardless of external potassium concentration or diastolic interval used, NS1643...

  11. Adenosine triphosphate-sensitive potassium channel opener protects PC12 cells against hypoxia-induced apoptosis through PI3K/Akt and Bcl-2 signaling pathways

    Institute of Scientific and Technical Information of China (English)

    Hong Zhang; Chunhong Jia; Danyang Zhao; Yang Lu; Runling Wang; Jia Li

    2010-01-01

    Although previous studies have shown the neuroprotective effects of the adenosine triphosphate (ATP)-sensitive potassium (KATP) channel opener against ischemic neuronal damage, little is known about the mechanisms involved. Phosphatidylinositol-3 kinase (PI3K)/v-akt murine thy-moma viral oncogene homolog (Akt) and Bcl-2 are thought to be important factors that mediate neuroprotection. The present study investigated the effects of KATP openers on hypoxia-induced PC12 cell apoptosis, as well as mRNA and protein expression of Akt and Bcl-2. Results demon-strated that pretreatment of PC12 cells with pinacidil, a KATP opener, resulted in decreased PC12 cell apoptosis following hypoxia, as detected by Annexin-V fluorescein isothiocyanate/ propidium iodide double staining flow cytometry. In addition, mRNA and protein expression of phosphorylated Akt (p-Akt) and Bcl-2 increased, as detected by immunofluorescence, Western blot analysis, and reverse-transcription polymerase chain reaction. The protective effect of this preconditioning was attenuated by glipizide, a selective KATP blocker. These results demonstrate for the first time that the protective mechanisms of KATP openers on PC12 cell apoptosis following hypoxia could result from activation of the PI3K/Akt signaling pathway, which further activates expression of the downstream Bcl-2 gene.

  12. K(ATP channel opener diazoxide prevents neurodegeneration: a new mechanism of action via antioxidative pathway activation.

    Directory of Open Access Journals (Sweden)

    Noemí Virgili

    Full Text Available Pharmacological modulation of ATP-sensitive potassium channels has become a promising new therapeutic approach for the treatment of neurodegenerative diseases due to their role in mitochondrial and cellular protection. For instance, diazoxide, a well-known ATP-sensitive potassium channel activator with high affinity for mitochondrial component of the channel has been proved to be effective in animal models for different diseases such as Alzheimer's disease, stroke or multiple sclerosis. Here, we analyzed the ability of diazoxide for protecting neurons front different neurotoxic insults in vitro and ex vivo. Results showed that diazoxide effectively protects NSC-34 motoneurons from glutamatergic, oxidative and inflammatory damage. Moreover, diazoxide decreased neuronal death in organotypic hippocampal slice cultures after exicitotoxicity and preserved myelin sheath in organotypic cerebellar cultures exposed to pro-inflammatory demyelinating damage. In addition, we demonstrated that one of the mechanisms of actions implied in the neuroprotective role of diazoxide is mediated by the activation of Nrf2 expression and nuclear translocation. Nrf2 expression was increased in NSC-34 neurons in vitro as well as in the spinal cord of experimental autoimmune encephalomyelitis animals orally administered with diazoxide. Thus, diazoxide is a neuroprotective agent against oxidative stress-induced damage and cellular dysfunction that can be beneficial for diseases such as multiple sclerosis.

  13. Water quality model parameter identification of an open channel in a long distance water transfer project based on finite difference, difference evolution and Monte Carlo.

    Science.gov (United States)

    Shao, Dongguo; Yang, Haidong; Xiao, Yi; Liu, Biyu

    2014-01-01

    A new method is proposed based on the finite difference method (FDM), differential evolution algorithm and Markov Chain Monte Carlo (MCMC) simulation to identify water quality model parameters of an open channel in a long distance water transfer project. Firstly, this parameter identification problem is considered as a Bayesian estimation problem and the forward numerical model is solved by FDM, and the posterior probability density function of the parameters is deduced. Then these parameters are estimated using a sampling method with differential evolution algorithm and MCMC simulation. Finally this proposed method is compared with FDM-MCMC by a twin experiment. The results show that the proposed method can be used to identify water quality model parameters of an open channel in a long distance water transfer project under different scenarios better with fewer iterations, higher reliability and anti-noise capability compared with FDM-MCMC. Therefore, it provides a new idea and method to solve the traceability problem in sudden water pollution accidents.

  14. Role of TRPV1 channels of the dorsal periaqueductal gray in the modulation of nociception and open elevated plus maze-induced antinociception in mice.

    Science.gov (United States)

    Mascarenhas, Diego Cardozo; Gomes, Karina Santos; Nunes-de-Souza, Ricardo Luiz

    2015-10-01

    Recent findings have identified the presence of transient receptor potential vanilloid-1 (TRPV1) channels within the dorsal portion of the periaqueductal gray (dPAG), suggesting their involvement in the control of pain and environmentally-induced antinociception. Environmentally, antinociception may be achieved through the use of an open elevated plus maze (oEPM, an EPM with 4 open arms), a highly aversive environmental situation. Here, we investigated the role of these TRPV1 channels within the dPAG in the modulation of a tonic pain and in the oEPM-induced antinociception. Male Swiss mice, under the nociceptive effect of 2.5% formalin injected into the right hind paw, received intra-dPAG injections of the TRPV1 agonist (capsaicin: 0, 0.01, 0.1 or 1.0 nmol/0.2 μL; Experiment 1) or antagonist (capsazepine: 0, 10 or 30 nmol/0.2 μL; Experiment 2) or combined injections of capsazepine (30 nmol) and capsaicin (1.0 nmol) (Experiment 3) and the time spent licking the formalin-injected paw was recorded. In Experiment 4, mice received intra-dPAG capsazepine (0 or 30 nmol) and were exposed to the oEPM or to a control situation, an enclosed EPM (eEPM; an EPM with 4 enclosed arms). Results showed that while capsaicin (1 nmol) decreased the time spent licking the formalin-injected paw, capsazepine did not change nociceptive response. Capsazepine (30 nmol) blocked pain inhibition induced by capsaicin and mildly attenuated the oEPM-induced antinociception. Our results revealed an important role of TRPV1 channels within the dPAG in the modulation of pain and in the phenomenon known as fear-induced antinociception in mice.

  15. The opening of maitotoxin-sensitive calcium channels induces the acrosome reaction in human spermatozoa: differences from the zona pellucida

    Institute of Scientific and Technical Information of China (English)

    Julio C Chávez; Claudia L Trevi(n)o; Gerardo A de Blas; José L de la Vega-Beltrán; Takuya Nishigaki; Mayel Chirinos; María Elena González-González; Fernando Larrea; Alejandra Solís; Alberto Darszon

    2011-01-01

    The acrosome reaction(AR),an absolute requirement for spermatozoa and egg fusion,requires the influx of Ca2+into the spermatozoa through voltage-dependent Ca2+channels and store-operated channels.Maitotoxin(MTx),a Ca2+-mobilizing agent,has been shown to be a potent inducer of the mouse sperm AR,with a pharmacology similar to that of the zona pellucida(ZP),possibly suggesting a common pathway for both inducers.Using recombinant human ZP3(rhZP3),mouse ZP and two MTx channel blockers(U73122 and U73343),we investigated and compared the MTx-and ZP-induced ARs in human and mouse spermatozoa.Herein,we report that MTx induced AR and elevated intracellular Ca2+([Ca2+]1)in human spermatozoa,both of which were blocked by U73122 and U73343.These two compounds also inhibited the MTx-induced AR in mouse spermatozoa.In disagreement with our previous proposal,the AR triggered by rhZP3 or mouse ZP was not blocked by U73343,indicating that in human and mouse spermatozoa,the AR induction by the physiologicalligands or by MTx occurred through distinct pathways.U73122,but not U73343(inactive analogue),can block phospholipase C(PLC).Another PLC inhibitor,edelfosine,also blocked the rhZP3-and ZP-induced ARs.These findings confirmed the participation of a PLC-dependent signalling pathway in human and mouse zona protein-induced AR.Notably,edelfosine also inhibited the MTx-induced mouse sperm AR but not that of the human,suggesting that toxin-induced AR is PLC-dependent in mice and PLC-independent in humans.

  16. Closure of mitochondrial potassium channels favors opening of the Tl(+)-induced permeability transition pore in Ca(2+)-loaded rat liver mitochondria.

    Science.gov (United States)

    Korotkov, Sergey M; Brailovskaya, Irina V; Shumakov, Anton R; Emelyanova, Larisa V

    2015-06-01

    It is known that a closure of ATP sensitive (mitoKATP) or BK-type Ca(2+) activated (mitoKCa) potassium channels triggers opening of the mitochondrial permeability transition pore (MPTP) in cells and isolated mitochondria. We found earlier that the Tl(+)-induced MPTP opening in Ca(2+)-loaded rat liver mitochondria was accompanied by a decrease of 2,4-dinitrophenol-uncoupled respiration and increase of mitochondrial swelling and ΔΨmito dissipation in the medium containing TlNO3 and KNO3. On the other hand, our study showed that the mitoKATP inhibitor, 5-hydroxydecanoate favored the Tl(+)-induced MPTP opening in the inner membrane of Ca(2+)-loaded rat heart mitochondria (Korotkov et al. 2013). Here we showed that 5-hydroxydecanoate increased the Tl(+)-induced MPTP opening in the membrane of rat liver mitochondria regardless of the presence of mitoKATP modulators (diazoxide and pinacidil). This manifested in more pronounced decrease in the uncoupled respiration and acceleration of both the swelling and the ΔΨmito dissipation in isolated rat liver mitochondria, incubated in the medium containing TlNO3, KNO3, and Ca(2+). A slight delay in Ca(2+)-induced swelling of the mitochondria exposed to diazoxide could be result of an inhibition of succinate oxidation by the mitoKATP modulator. Mitochondrial calcium retention capacity (CRC) was markedly decreased in the presence of the mitoKATP inhibitor (5-hydroxydecanoate) or the mitoKCa inhibitor (paxilline). We suggest that the closure of mitoKATP or mitoKCa in calcium loaded mitochondria favors opening of the Tl(+)-induced MPTP in the inner mitochondrial membrane.

  17. MHD mixed convection analysis in an open channel by obstructed Poiseuille flow of non-Newtonian power law fluid

    Science.gov (United States)

    Rabbi, Khan Md.; Rakib, Tawfiqur; Das, Sourav; Mojumder, Satyajit; Saha, Sourav

    2016-07-01

    This paper demonstrates magneto-hydrodynamic (MHD) mixed convection flow through a channel with a rectangular obstacle at the entrance region using non-Newtonian power law fluid. The obstacle is kept at uniformly high temperature whereas the inlet and top wall of the channel are maintained at a temperature lower than obstacle temperature. Poiseuille flow is implemented as the inlet velocity boundary condition. Grid independency test and code validation are performed to justify the computational accuracy before solving the present problem. Galerkin weighted residual method has been appointed to solve the continuity, momentum and energy equations. The problem has been solved for wide range of pertinent parameters like Richardson number (Ri = 0.1 - 10) at a constant Reynolds number (Re = 100), Hartmann number (Ha = 0 - 100), power index (n = 0.6 - 1.6). The flow and thermal field have been thoroughly discussed through streamline and isothermal lines respectively. The heat transfer performance of the given study has been illustrated by average Nusselt number plots. It is observed that increment of Hartmann number (Ha) tends to decrease the heat transfer rate up to a critical value (Ha = 20) and then let increase the heat transfer performance. Thus maximum heat transfer rate has been recorded for higher Hartmann number and Rayleigh number in case of pseudo-plastic (n = 0.6) non-Newtonian fluid flow.

  18. Functional Contributions of Positive Charges in the Pore-Lining Helix 3 of the Bordetella pertussis CyaA-Hemolysin to Hemolytic Activity and Ion-Channel Opening

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    Chattip Kurehong

    2017-03-01

    Full Text Available The Bordetella pertussis CyaA-hemolysin (CyaA-Hly domain was previously demonstrated to be an important determinant for hemolysis against target erythrocytes and ion-channel formation in planar lipid bilayers (PLBs. Here, net-charge variations in the pore-lining helix of thirteen related RTX cytolysins including CyaA-Hly were revealed by amino acid sequence alignments, reflecting their different degrees of hemolytic activity. To analyze possible functional effects of net-charge alterations on hemolytic activity and channel formation of CyaA-Hly, specific mutations were made at Gln574 or Glu581 in its pore-lining α3 of which both residues are highly conserved Lys in the three highly active RTX cytolysins (i.e., Escherichia coli α-hemolysin, Actinobacillus pleuropneumoniae toxin, and Aggregatibacter actinomycetemcomitans leukotoxin. All six constructed CyaA-Hly mutants that were over-expressed in E. coli as 126 kDa His-tagged soluble proteins were successfully purified via immobilized Ni2+-affinity chromatography. Both positive-charge substitutions (Q574K, Q574R, E581K, E581R and negative-charge elimination (E581Q appeared to increase the kinetics of toxin-induced hemolysis while the substitution with a negatively-charged side-chain (Q574E completely abolished its hemolytic activity. When incorporated into PLBs under symmetrical conditions (1.0 M KCl, pH 7.4, all five mutant toxins with the increased hemolytic activity produced clearly-resolved single channels with higher open probability and longer lifetime than the wild-type toxin, albeit with a half decrease in their maximum conductance. Molecular dynamics simulations for 50 ns of a trimeric CyaA-Hly pore model comprising three α2-loop-α3 transmembrane hairpins revealed a significant role of the positive charge at both target positions in the structural stability and enlarged diameter of the simulated pore. Altogether, our present data have disclosed functional contributions of positively

  19. An open source workbook in Excel for viewing and analyzing demagnetization data from paleomagnetic discrete samples and u-channels

    Science.gov (United States)

    Sagnotti, L.

    2012-12-01

    Modern rock magnetometers and stepwise demagnetization procedures result in the production of large datasets, which need a versatile and fast software for their display and analysis. Various software packages for paleomagnetic analyses have been recently developed to overcome the problems linked to the limited capability and the loss of operability of early codes written in obsolete computer languages and/or platforms, not compatible with modern 64 bit processors. Here I present a new software for viewing and analyzing demagnetization data from paleomagnetic discrete samples and u-channels, which consists of a workbook for Microsoft Excel. The widespread diffusion of Excel ensures multiplatform operability and offers guarantees for long term operability, independently form the development of new processors and operating systems. In order to reduce the problems linked to the rapid evolution of the programming environments, the workbook makes use of a few macros, written in Visual Basic and necessary only to automatically save the output data. The workbook is designed for an interactive operability and all the commands and choices can be entered by sliding menus associated to single cells. All the standard demagnetization diagrams (Zijderveld orthogonal projection diagrams, stereographic projection of unit vectors, decay of the remanence intensity) are featured and both the user-driven and the automatic computation of the remanence characteristic components by principal component analysis are allowed. In addition, various other common demagnetization parameters (MDF, deltaGRM) are computed. The whole workbook is free for use and modification. The program has the following features which may be valuable for various users: - Operability in nearly all the computers and platforms; - Easy inputs of demagnetization data by "copy and paste" from ASCII files. The required data consist of only 9 columns: (1) sample code, (2) demagnetization steps, (3-5) raw measurements from

  20. Orientations and proximities of the extracellular ends of transmembrane helices S0 and S4 in open and closed BK potassium channels.

    Directory of Open Access Journals (Sweden)

    Xiaowei Niu

    Full Text Available The large-conductance potassium channel (BK α subunit contains a transmembrane (TM helix S0 preceding the canonical TM helices S1 through S6. S0 lies between S4 and the TM2 helix of the regulatory β1 subunit. Pairs of Cys were substituted in the first helical turns in the membrane of BK α S0 and S4 and in β1 TM2. One such pair, W22C in S0 and W203C in S4, was 95% crosslinked endogenously. Under voltage-clamp conditions in outside-out patches, this crosslink was reduced by DTT and reoxidized by a membrane-impermeant bis-quaternary ammonium derivative of diamide. The rate constants for this reoxidation were not significantly different in the open and closed states of the channel. Thus, these two residues are approximately equally close in the two states. In addition, 90% crosslinking of a second pair, R20C in S0 and W203C in S4, had no effect on the V50 for opening. Taken together, these findings indicate that separation between residues at the extracellular ends of S0 and S4 is not required for voltage-sensor activation. On the contrary, even though W22C and W203C were equally likely to form a disulfide in the activated and deactivated states, relative immobilization by crosslinking of these two residues favored the activated state. Furthermore, the efficiency of recrosslinking of W22C and W203C on the cell surface was greater in the presence of the β1 subunit than in its absence, consistent with β1 acting through S0 to stabilize its immobilization relative to α S4.

  1. An integrated model coupling open-channel flow, turbidity current and flow exchanges between main river and tributaries in Xiaolangdi Reservoir, China

    Science.gov (United States)

    Wang, Zenghui; Xia, Junqiang; Li, Tao; Deng, Shanshan; Zhang, Junhua

    2016-12-01

    The ever growing importance of sustainable management of reservoir sedimentation has promoted the development and applications of turbidity current models. However, there are few effective and practical models in literature for turbidity currents in a reservoir where the impounded area involves both the main river and its many tributaries. An integrated numerical model coupling open-channel flow, turbidity current and flow exchanges between main river and tributaries is proposed, which can simulate the complex flow and sediment transport in a reservoir where these three physical processes coexist. The model consists of two sets of governing equations for the open-channel flow and turbidity current, which are based on the modified St. Venant equations by taking into account the effect of lateral flow exchanges. These two sets of equations are solved in the finite volume method framework and the solutions are executed in an alternating calculation mode. Different methods are respectively proposed to calculate the discharge of flow exchange caused by free surface gradient and turbidity current intrusion. For the surface-gradient driven flow exchange, a storage cell method, which re-defines the relationship between water level and representative cross-sectional area, is used to update the water level at confluence. For the turbidity current intrusion, a discharge formula is proposed based on the analysis of the energy and momentum transformation in the intruding turbid water body. This formula differs from previous ones in that the effect of tributary bed slope is considered. Two events of water-sediment regulation conducted in the Xiaolangdi Reservoir in 2004 and 2006 were simulated to test the ability of this model. The predicted reservoir drawdown process, the turbidity current evolution and the sediment venting efficiency were in close agreement with the measurements. The necessity to couple the flow exchanges was demonstrated by comparing the performance of the

  2. A competing hydrophobic tug on L596 to the membrane core unlatches S4-S5 linker elbow from TRP helix and allows TRPV4 channel to open.

    Science.gov (United States)

    Teng, Jinfeng; Loukin, Stephen H; Anishkin, Andriy; Kung, Ching

    2016-10-18

    We have some generalized physical understanding of how ion channels interact with surrounding lipids but few detailed descriptions on how interactions of particular amino acids with contacting lipids may regulate gating. Here we discovered a structure-specific interaction between an amino acid and inner-leaflet lipid that governs the gating transformations of TRPV4 (transient receptor potential vanilloid type 4). Many cation channels use a S4-S5 linker to transmit stimuli to the gate. At the start of TRPV4's linker helix is leucine 596. A hydrogen bond between the indole of W733 of the TRP helix and the backbone oxygen of L596 secures the helix/linker contact, which acts as a latch maintaining channel closure. The modeled side chain of L596 interacts with the inner lipid leaflet near the polar-nonpolar interface in our model-an interaction that we explored by mutagenesis. We examined the outward currents of TRPV4-expressing Xenopus oocyte upon depolarizations as well as phenotypes of expressing yeast cells. Making this residue less hydrophobic (L596A/G/W/Q/K) reduces open probability [Po; loss-of-function (LOF)], likely due to altered interactions at the polar-nonpolar interface. L596I raises Po [gain-of-function (GOF)], apparently by placing its methyl group further inward and receiving stronger water repulsion. Molecular dynamics simulations showed that the distance between the levels of α-carbons of H-bonded residues L596 and W733 is shortened in the LOFs and lengthened in the GOFs, strengthening or weakening the linker/TRP helix latch, respectively. These results highlight that L596 lipid attraction counteracts the latch bond in a tug-of-war to tune the Po of TRPV4.

  3. Selective gas adsorption and unique structural topology of a highly stable guest-free zeolite-type MOF material with N-rich chiral open channels.

    Science.gov (United States)

    Li, Jian-Rong; Tao, Ying; Yu, Qun; Bu, Xian-He; Sakamoto, Hirotoshi; Kitagawa, Susumu

    2008-01-01

    A new multifunctional di-topic tetrazolate-based ligand, 2,3-di-1H-tetrazol-5-ylpyrazine (H(2)dtp) has been designed and synthesized. The solvothermal reaction of this ligand with ZnCl(2) gave a robust guest-free three-dimensional zeolite-like chiral metal-organic framework (MOF) complex, [Zn(dtp)], which crystallized in chiral space group P6(1) and possessed chiral open channels with nitrogen-rich walls and the diameter of approximately 4.1 A. This framework presents a unique uniform etd (8,3) topology, is the first example of its type in MOFs, and exhibits high thermal stability with the decomposition temperature above 380 degrees C and permanent porosity. It is interesting that this material is able to selectively adsorb O(2) and CO(2) over N(2) gas, being a rare example in MOFs. In addition, C(2)H(2) and MeOH adsorption results show that although the framework channel holds nitrogen-rich walls that may provide H-bonding sites, no NH H-bond effect between the guest molecules and microporous surface was observed.

  4. Charged residues distribution modulates selectivity of the open state of human isoforms of the voltage dependent anion-selective channel.

    Science.gov (United States)

    Amodeo, Giuseppe Federico; Scorciapino, Mariano Andrea; Messina, Angela; De Pinto, Vito; Ceccarelli, Matteo

    2014-01-01

    Voltage Dependent Anion-selective Channels (VDACs) are pore-forming proteins located in the outer mitochondrial membrane. They are responsible for the access of ions and energetic metabolites into the inner membrane transport systems. Three VDAC isoforms exist in mammalian, but their specific role is unknown. In this work we have performed extensive (overall ∼5 µs) Molecular Dynamics (MD) simulations of the human VDAC isoforms to detect structural and conformational variations among them, possibly related to specific functional roles of these proteins. Secondary structure analysis of the N-terminal domain shows a high similarity among the three human isoforms of VDAC but with a different plasticity. In particular, the N-terminal domain of the hVDAC1 is characterized by a higher plasticity, with a ∼20% occurrence for the 'unstructured' conformation throughout the folded segment, while hVDAC2, containing a peculiar extension of 11 amino acids at the N-terminal end, presents an additional 310-helical folded portion comprising residues 10' to 3, adhering to the barrel wall. The N-terminal sequences of hVDAC isoforms are predicted to have a low flexibility, with possible consequences in the dynamics of the human VDACs. Clear differences were found between hVDAC1 and hVDAC3 against hVDAC2: a significantly modified dynamics with possible important consequence on the voltage-gating mechanism. Charge distribution inside and at the mouth of the pore is responsible for a different preferential localization of ions with opposite charge and provide a valuable rationale for hVDAC1 and hVDAC3 having a Cl-/K+ selectivity ratio of 1.8, whereas hVDAC2 of 1.4. Our conclusion is that hVDAC isoforms, despite sharing a similar scaffold, have modified working features and a biological work is now requested to give evidence to the described dissimilarities.

  5. Retigabine, a Kv7.2/Kv7.3-Channel Opener, Attenuates Drug-Induced Seizures in Knock-In Mice Harboring Kcnq2 Mutations.

    Science.gov (United States)

    Ihara, Yukiko; Tomonoh, Yuko; Deshimaru, Masanobu; Zhang, Bo; Uchida, Taku; Ishii, Atsushi; Hirose, Shinichi

    2016-01-01

    The hetero-tetrameric voltage-gated potassium channel Kv7.2/Kv7.3, which is encoded by KCNQ2 and KCNQ3, plays an important role in limiting network excitability in the neonatal brain. Kv7.2/Kv7.3 dysfunction resulting from KCNQ2 mutations predominantly causes self-limited or benign epilepsy in neonates, but also causes early onset epileptic encephalopathy. Retigabine (RTG), a Kv7.2/ Kv7.3-channel opener, seems to be a rational antiepileptic drug for epilepsies caused by KCNQ2 mutations. We therefore evaluated the effects of RTG on seizures in two strains of knock-in mice harboring different Kcnq2 mutations, in comparison to the effects of phenobarbital (PB), which is the first-line antiepileptic drug for seizures in neonates. The subjects were heterozygous knock-in mice (Kcnq2Y284C/+ and Kcnq2A306T/+) bearing the Y284C or A306T Kcnq2 mutation, respectively, and their wild-type (WT) littermates, at 63-100 days of age. Seizures induced by intraperitoneal injection of kainic acid (KA, 12mg/kg) were recorded using a video-electroencephalography (EEG) monitoring system. Effects of RTG on KA-induced seizures of both strains of knock-in mice were assessed using seizure scores from a modified Racine's scale and compared with those of PB. The number and total duration of spike bursts on EEG and behaviors monitored by video recording were also used to evaluate the effects of RTG and PB. Both Kcnq2Y284C/+ and Kcnq2A306T/+ mice showed significantly more KA-induced seizures than WT mice. RTG significantly attenuated KA-induced seizure activities in both Kcnq2Y284C/+ and Kcnq2A306T/+ mice, and more markedly than PB. This is the first reported evidence of RTG ameliorating KA-induced seizures in knock-in mice bearing mutations of Kcnq2, with more marked effects than those observed with PB. RTG or other Kv7.2-channel openers may be considered as first-line antiepileptic treatments for epilepsies resulting from KCNQ2 mutations.

  6. Retigabine, a Kv7.2/Kv7.3-Channel Opener, Attenuates Drug-Induced Seizures in Knock-In Mice Harboring Kcnq2 Mutations.

    Directory of Open Access Journals (Sweden)

    Yukiko Ihara

    Full Text Available The hetero-tetrameric voltage-gated potassium channel Kv7.2/Kv7.3, which is encoded by KCNQ2 and KCNQ3, plays an important role in limiting network excitability in the neonatal brain. Kv7.2/Kv7.3 dysfunction resulting from KCNQ2 mutations predominantly causes self-limited or benign epilepsy in neonates, but also causes early onset epileptic encephalopathy. Retigabine (RTG, a Kv7.2/ Kv7.3-channel opener, seems to be a rational antiepileptic drug for epilepsies caused by KCNQ2 mutations. We therefore evaluated the effects of RTG on seizures in two strains of knock-in mice harboring different Kcnq2 mutations, in comparison to the effects of phenobarbital (PB, which is the first-line antiepileptic drug for seizures in neonates. The subjects were heterozygous knock-in mice (Kcnq2Y284C/+ and Kcnq2A306T/+ bearing the Y284C or A306T Kcnq2 mutation, respectively, and their wild-type (WT littermates, at 63-100 days of age. Seizures induced by intraperitoneal injection of kainic acid (KA, 12mg/kg were recorded using a video-electroencephalography (EEG monitoring system. Effects of RTG on KA-induced seizures of both strains of knock-in mice were assessed using seizure scores from a modified Racine's scale and compared with those of PB. The number and total duration of spike bursts on EEG and behaviors monitored by video recording were also used to evaluate the effects of RTG and PB. Both Kcnq2Y284C/+ and Kcnq2A306T/+ mice showed significantly more KA-induced seizures than WT mice. RTG significantly attenuated KA-induced seizure activities in both Kcnq2Y284C/+ and Kcnq2A306T/+ mice, and more markedly than PB. This is the first reported evidence of RTG ameliorating KA-induced seizures in knock-in mice bearing mutations of Kcnq2, with more marked effects than those observed with PB. RTG or other Kv7.2-channel openers may be considered as first-line antiepileptic treatments for epilepsies resulting from KCNQ2 mutations.

  7. "Eyes Open - Eyes Closed" EEG/fMRI data set including dedicated "Carbon Wire Loop" motion detection channels.

    Science.gov (United States)

    van der Meer, Johan; Pampel, André; van Someren, Eus; Ramautar, Jennifer; van der Werf, Ysbrand; Gomez-Herrero, German; Lepsien, Jöran; Hellrung, Lydia; Hinrichs, Hermann; Möller, Harald; Walter, Martin

    2016-06-01

    This data set contains electroencephalography (EEG) data as well as simultaneous EEG with functional magnetic resonance imaging (EEG/fMRI) data. During EEG/fMRI, the EEG cap was outfitted with a hardware-based add-on consisting of carbon-wire loops (CWL). These yielded six extra׳CWL׳ signals related to Faraday induction of these loops in the main magnetic field "Measurement and reduction of motion and ballistocardiogram artefacts from simultaneous EEG and fMRI recordings" (Masterton et al., 2007) [1]. In this data set, the CWL data make it possible to do a direct regression approach to deal with the BCG and specifically He artifact. The CWL-EEG/fMRI data in this paper has been recorded on two MRI scanners with different Helium pump systems (4 subjects on a 3 T TIM Trio and 4 subjects on a 3T VERIO). Separate EEG/fMRI data sets have been recorded for the helium pump ON as well as the helium pump OFF conditions. The EEG-only data (same subjects) has been recorded for a motion artifact-free reference EEG signal outside of the scanner. This paper also links to an EEGlab "EEGLAB: an open source toolbox for analysis of single-trial EEG dynamics including independent component analysis" (Delorme and Makeig, 2004) [2] plugin to perform a CWL regression approach to deal with the He pump artifact, as published in the main paper "Carbon-wire loop based artifact correction outperforms post-processing EEG/fMRI corrections-A validation of a real-time simultaneous EEG/fMRI correction method" (van der Meer et al., 2016) [3].

  8. Effects of KATP channel openers diazoxide and pinacidil in coronary-perfused atria and ventricles from failing and non-failing human hearts

    Science.gov (United States)

    Fedorov, Vadim V.; Glukhov, Alexey V.; Ambrosi, Christina M.; Kostecki, Geran; Chang, Roger; Janks, Deborah; Schuessler, Richard B.; Moazami, Nader; Nichols, Colin G.; Efimov, Igor R.

    2011-01-01

    INTRODUCTION This study compared the effects of ATP-regulated potassium channel (KATP) openers, diazoxide and pinacidil, on diseased and normal human atria and ventricles. METHODS We optically mapped the endocardium of coronary-perfused right (n=11) or left (n=2) posterior atrial-ventricular free wall preparations from human hearts with congestive heart failure (CHF, n=8) and non-failing human hearts without (NF, n=3) or with (INF, n=2) infarction. We also analyzed the mRNA expression of the KATP targets Kir6.1, Kir6.2, SUR1, and SUR2 in the left atria and ventricles of NF (n=8) and CHF (n=4) hearts. RESULTS In both CHF and INF hearts, diazoxide significantly decreased action potential durations (APDs) in atria (by −21±3% and −27±13%, p<0.01) and ventricles (by −28±7% and −28±4%, p<0.01). Diazoxide did not change APD (0±5%) in NF atria. Pinacidil significantly decreased APDs in both atria (−46 to - 80%, p<0.01) and ventricles (−65 to −93%, p<0.01) in all hearts studied. The effect of pinacidil on APD was significantly higher than that of diazoxide in both atria and ventricles of all groups (p<0.05). During pinacidil perfusion, burst pacing induced flutter/fibrillation in all atrial and ventricular preparations with dominant frequencies of 14.4±6.1 Hz and 17.5 ±5.1 Hz, respectively. Glibenclamide (10 μM) terminated these arrhythmias and restored APDs to control values. Relative mRNA expression levels of KATP targets were correlated to functional observations. CONCLUSION Remodeling in response to CHF and/or previous infarct potentiated diazoxide-induced APD shortening. The activation of atrial and ventricular KATP channels enhances arrhythmogenicity, suggesting that such activation may contribute to reentrant arrhythmias in ischemic hearts. PMID:21586291

  9. Cellular Entry of the Diphtheria Toxin Does Not Require the Formation of the Open-Channel State by Its Translocation Domain

    Directory of Open Access Journals (Sweden)

    Alexey S. Ladokhin

    2017-09-01

    Full Text Available Cellular entry of diphtheria toxin is a multistage process involving receptor targeting, endocytosis, and translocation of the catalytic domain across the endosomal membrane into the cytosol. The latter is ensured by the translocation (T domain of the toxin, capable of undergoing conformational refolding and membrane insertion in response to the acidification of the endosomal environment. While numerous now classical studies have demonstrated the formation of an ion-conducting conformation—the Open-Channel State (OCS—as the final step of the refolding pathway, it remains unclear whether this channel constitutes an in vivo translocation pathway or is a byproduct of the translocation. To address this question, we measure functional activity of known OCS-blocking mutants with H-to-Q replacements of C-terminal histidines of the T-domain. We also test the ability of these mutants to translocate their own N-terminus across lipid bilayers of model vesicles. The results of both experiments indicate that translocation activity does not correlate with previously published OCS activity. Finally, we determined the topology of TH5 helix in membrane-inserted T-domain using W281 fluorescence and its depth-dependent quenching by brominated lipids. Our results indicate that while TH5 becomes a transbilayer helix in a wild-type protein, it fails to insert in the case of the OCS-blocking mutant H322Q. We conclude that the formation of the OCS is not necessary for the functional translocation by the T-domain, at least in the histidine-replacement mutants, suggesting that the OCS is unlikely to constitute a translocation pathway for the cellular entry of diphtheria toxin in vivo.

  10. Demagnetization Analysis in Excel (DAIE) - An open source workbook in Excel for viewing and analyzing demagnetization data from paleomagnetic discrete samples and u-channels

    Science.gov (United States)

    Sagnotti, Leonardo

    2013-04-01

    Modern rock magnetometers and stepwise demagnetization procedures result in the production of large datasets, which need a versatile and fast software for their display and analysis. Various software packages for paleomagnetic analyses have been recently developed to overcome the problems linked to the limited capability and the loss of operability of early codes written in obsolete computer languages and/or platforms, not compatible with modern 64 bit processors. The Demagnetization Analysis in Excel (DAIE) workbook is a new software that has been designed to make the analysis of demagnetization data easy and accessible on an application (Microsoft Excel) widely diffused and available on both the Microsoft Windows and Mac OS X operating systems. The widespread diffusion of Excel should guarantee a long term working life, since compatibility and functionality of current Excel files should be most likely maintained during the development of new processors and operating systems. DAIE is designed for viewing and analyzing stepwise demagnetization data of both discrete and u-channel samples. DAIE consists of a single file and has an open modular structure organized in 10 distinct worksheets. The standard demagnetization diagrams and various parameters of common use are shown on the same worksheet including selectable parameters and user's choices. The remanence characteristic components may be computed by principal component analysis (PCA) on a selected interval of demagnetization steps. Saving of the PCA data can be done both sample by sample, or in automatic by applying the selected choices to all the samples included in the file. The DAIE open structure allows easy personalization, development and improvement. The workbook has the following features which may be valuable for various users: - Operability in nearly all the computers and platforms; - Easy inputs of demagnetization data by "copy and paste" from ASCII files; - Easy export of computed parameters and

  11. [Biochemical mechanisms of the cardioprotective effect of the K(ATP) channels opener flocalin (medicinal form) in ischemia-reperfusion of myocardium].

    Science.gov (United States)

    Strutyns'kyĭ, R B; Kotsiuruba, A V; Rovenets', R A; Strutyns'ka, N A; Iagupols'kyĭ, Iu L; Sagach, V F; Moĭbenko, O O

    2013-01-01

    In experiments on the anaesthetized dogs with modeling of experimental ischemia (90 min) and reperfusion (180 min) of myocardium it was investigated changes of biochemical processes in arterial blood at intragastric introduction of medicinal form (tablets) of flocalin (the fluorine-containing opener of ATP-sensitive potassium channels) in a dose 2,2 mg/kg. The data analysis allowed to define a few possible mechanisms of cardioprotective action offlocalin, which prevented the opening of a mitochondrial permeability transition pore (MPTP) and inhibition of apoptosis induced by it. They consist, from one side, in activating of the constitutive de novo biosynthesis of nitric oxide by cNOS, from other side, in suppression of inducible nitric oxide de novo synthesis by iNOS in such way to prevent the formation of toxic peroxynitrite by co-operation of surplus nitric oxide with superoxide anion, thereby limits the generation of toxic active forms of nitrogen (*NO2) and oxygen (*OH). The first effect of flocalin takes place due to limitation the degradation of L-arginine by arginase which keeps substrat for cNOS, second--due to the inhibition of superoxide generation, in particular, by xanthine oxidase (marker uric acid), lipoxigenase (marker LTC4) and cyclooxygenase (marker TxB2). Because LTC4 have coronaroconstrictory, arrhythmogenic and chemoattractory properties in the conditions of myocardial ischemia, inhibition of its production both with superoxide generation (markers H2O2 and diene conjugates) may be the another mechanisms of flocalin's cardioprotection. Powerful antiischemic action of flocalin (marker nitrite anion) as the mechanisms of cardioprotection is possible as well as inhibition of ATP and GTP degradation (marker hypoxanthine+xanthine+inosine levels in the blood) and, possibly, stimulation ofhaem degradation by haem oxygenase (markers total bilirubin and Fe in the blood). Diminishing content of free arachidonic acid in arterial blood can testify

  12. Metamizol acts as an ATP sensitive potassium channel opener to inhibit the contracting response induced by angiotensin II but not to norepinephrine in rat thoracic aorta smooth muscle.

    Science.gov (United States)

    Valenzuela, Fermín; García-Saisó, Sebastián; Lemini, Cristina; Ramírez-Solares, Rafael; Vidrio, Horacio; Mendoza-Fernández, Víctor

    2005-08-01

    Clinically metamizol (MZ) has been related to alteration on haemodynamic parameters and modifications on blood pressure in humans when administered intravenously. These effects have been observed at MZ therapeutic doses. Experimentally, MZ is able to induce relaxation on several types of vascular smooth muscles and modulates the contraction induced by phenylephrine. However, the mechanism underlying the MZ effects on vascular reactivity is not clear. Potassium channels (K) present on vascular smooth muscle cells closely regulate the vascular reactivity and membrane potential. There are four described types of K in vascular tissue: K voltage sensitive (K(V)), K calcium sensitive (K(Ca)2+), K ATP sensitive (K(ATP) and K inward rectification (K(IR), voltage sensitive). The aim of this work was to investigate MZ effects on angiotensin II (AT II) and noradrenaline (NA) induced contraction and to evaluate the K participation on MZ modulating effect on vascular smooth muscle contraction, using isometric and patch clamp techniques. MZ induces relaxation in a concentration dependent manner. Furthermore, MZ strongly inhibits in a concentration dependent fashion the contraction induced by AT II. However, MZ inhibition on NA induced contraction was moderated compared with that observed on AT II. MZ effects on AT II induced contraction was blocked by glybenclamide (a specific K(ATP) blocker, 3 microM, *p < 0.01). In patch clamp experiments, MZ (3 mM) induces an increase on potassium current (K+) mediated by K(ATP) in similar way as diazoxide (a specific K(ATP) opener, 3 microM). Our results suggest that MZ induces relaxation and inhibits contraction induced by AT II acting as a K(ATP) opener.

  13. The amiodarone derivative 2-methyl-3-(3,5-diiodo-4-carboxymethoxybenzyl)benzofuran (KB130015) opens large-conductance Ca2+-activated K+ channels and relaxes vascular smooth muscle.

    Science.gov (United States)

    Gessner, Guido; Heller, Regine; Hoshi, Toshinori; Heinemann, Stefan H

    2007-01-26

    2-methyl-3-(3,5-diiodo-4-carboxymethoxybenzyl)benzofuran (KB130015) has been developed to retain the antiarrhythmic properties of the parent molecule amiodarone but to eliminate its undesired side effects. In patch-clamp experiments, KB130015 activated large-conductance, Ca2+-activated BK(Ca) channels formed by hSlo1 (alpha) subunits in HEK 293 cells. Channels were reversibly activated by shifting the open-probability/voltage (P(o)/V) relationship by about -60 mV in 3 muM intracellular free Ca2+ ([Ca2+]in). No effect on the single-channel conductance was observed. KB130015-mediated activation of BK(Ca) channels was half-maximal at 20 microM with a Hill coefficient of 2.8. BK(Ca) activation by KB130015 did not require the presence of Ca2+ and still occurred with saturating (100 microM) [Ca2+]in. Effects of the prototypic BK(Ca) activator NS1619 (1,3-dihydro-1-[2-hydroxy-5-(trifluoromethyl)phenyl]-5-(trifluoromethyl)-2H-benzimidazol-2-one) and those of KB130015 were not additive suggesting that both activators may at least partially share a common mechanism of action. KB130015-mediated activation was observed also for BK(Ca) channels from insects and for human BK(Ca) channels with already profoundly left-shifted voltage-dependence. In contrast, human intermediate conductance Ca2+-activated channels were inhibited by KB130015. Using segments of porcine pulmonary arteries, KB130015 induced endothelium-independent vasorelaxation, half-maximal at 43 microM KB130015. Relaxation was inhibited by 1 mM tetraethylammonium, suggesting that KB130015 can activate vascular smooth muscle type BK(Ca) channels under physiological conditions. Interestingly, the shift in the P(o)/V relationship was considerably stronger (-90 mV in 3 microM [Ca2+]in) for BK(Ca) channels containing Slo-beta1 subunits. Thus, KB130015 belongs to a novel class of BK(Ca) channel openers that exert an effect depending on the subunit composition of the channel complex.

  14. Full Equations (FEQ) model for the solution of the full, dynamic equations of motion for one-dimensional unsteady flow in open channels and through control structures

    Science.gov (United States)

    Franz, Delbert D.; Melching, Charles S.

    1997-01-01

    The Full EQuations (FEQ) model is a computer program for solution of the full, dynamic equations of motion for one-dimensional unsteady flow in open channels and through control structures. A stream system that is simulated by application of FEQ is subdivided into stream reaches (branches), parts of the stream system for which complete information on flow and depth are not required (dummy branches), and level-pool reservoirs. These components are connected by special features; that is, hydraulic control structures, including junctions, bridges, culverts, dams, waterfalls, spillways, weirs, side weirs, and pumps. The principles of conservation of mass and conservation of momentum are used to calculate the flow and depth throughout the stream system resulting from known initial and boundary conditions by means of an implicit finite-difference approximation at fixed points (computational nodes). The hydraulic characteristics of (1) branches including top width, area, first moment of area with respect to the water surface, conveyance, and flux coefficients and (2) special features (relations between flow and headwater and (or) tail-water elevations, including the operation of variable-geometry structures) are stored in function tables calculated in the companion program, Full EQuations UTiLities (FEQUTL). Function tables containing other information used in unsteady-flow simulation (boundary conditions, tributary inflows or outflows, gate settings, correction factors, characteristics of dummy branches and level-pool reservoirs, and wind speed and direction) are prepared by the user as detailed in this report. In the iterative solution scheme for flow and depth throughout the stream system, an interpolation of the function tables corresponding to the computational nodes throughout the stream system is done in the model. FEQ can be applied in the simulation of a wide range of stream configurations (including loops), lateral-inflow conditions, and special features. The

  15. The analgesic effect of dipyrone in peripheral tissue involves two different mechanisms: neuronal K(ATP) channel opening and CB(1) receptor activation.

    Science.gov (United States)

    dos Santos, Gilson Gonçalves; Dias, Elayne Vieira; Teixeira, Juliana Maia; Athie, Maria Carolina Pedro; Bonet, Ivan José Magayewski; Tambeli, Cláudia Herrera; Parada, Carlos Amilcar

    2014-10-15

    Dipyrone (metamizole) is an analgesic pro-drug used to control moderate pain. It is metabolized in two major bioactive metabolites: 4-methylaminoantipyrine (4-MAA) and 4-aminoantipyrine (4-AA). The aim of this study was to investigate the participation of peripheral CB1 and CB2 cannabinoid receptors activation in the anti-hyperalgesic effect of dipyrone, 4-MAA or 4-AA. PGE2 (100ng/50µL/paw) was locally administered in the hindpaw of male Wistar rats, and the mechanical nociceptive threshold was quantified by electronic von Frey test, before and 3h after its injection. Dipyrone, 4-MAA or 4-AA was administered 30min before the von Frey test. The selective CB1 receptor antagonist AM251, CB2 receptor antagonist AM630, cGMP inhibitor ODQ or KATP channel blocker glibenclamide were administered 30min before dipyrone, 4-MAA or 4-AA. The antisense-ODN against CB1 receptor expression was intrathecally administered once a day during four consecutive days. PGE2-induced mechanical hyperalgesia was inhibited by dipyrone, 4-MAA, and 4-AA in a dose-response manner. AM251 or ODN anti-sense against neuronal CB1 receptor, but not AM630, reversed the anti-hyperalgesic effect mediated by 4-AA, but not by dipyrone or 4-MAA. On the other hand, the anti-hyperalgesic effect of dipyrone or 4-MAA was reversed by glibenclamide or ODQ. These results suggest that the activation of neuronal CB1, but not CB2 receptor, in peripheral tissue is involved in the anti-hyperalgesic effect of 4-aminoantipyrine. In addition, 4-methylaminoantipyrine mediates the anti-hyperalgesic effect by cGMP activation and KATP opening. Copyright © 2014 Elsevier B.V. All rights reserved.

  16. Experimental investigations and numerical simulations for an open channel flow of a weak elastic polymer solution around a T-profile

    Energy Technology Data Exchange (ETDEWEB)

    Balan, C.; Neagoe, A.; Nistoran, D. [Hydraulics and Hydraulic Machinery Department - REOROM Group, University ' ' Politehnica' ' of Bucharest, Splaiul Independentei 313, 79590, Bucharest (Romania); Legat, V. [University of Louvain-la-Neuve - Center for Systems Engineering Applied Mechanics (CESAME), Batiment Euler, Av. Georges Lemaitre 4, 1348, Louvain-la-Neuve (Belgium)

    2004-03-01

    The present paper is concerned with experimental and numerical investigations of planar complex flows of ''weak'' elastic polymer solutions (whose concentration are below the critical overlap concentration), characterised by small relaxation times ({lambda}<0.1 s) and almost constant shear viscosities for small and medium shear rates. The main aim of the study is to detect to what extent a very small amount of elasticity present in a viscous fluid can influence its behaviour in complex flows, without introducing major modifications of classical rheological tests. The samples are polymer solutions of low PIB molecular weight dissolved in highly viscous Newtonian mineral oil. The analysed motion is steady, and takes place in an open channel around a ''T'' profile. Maximum values of the characteristic parameters for the experiments, the Reynolds and Weissenberg numbers, were 45 and 0.1, respectively. The experiments show a decrease of the wake length downstream the profile for weak elastic solutions in comparison to the Newtonian solvent. Actually, the same wake length as in the Newtonian case was obtained for tested polymer solutions, but at higher Re numbers. Numerical simulations using the Giesekus model predict the same behaviour and are consistent with experiments from both qualitative and quantitative point of views. The results of research conclude that, even in small amounts, the presence of elasticity in pure viscous liquids induces quantitative changes from Newtonian flow in complex dominant elongational flows, at elongational rates for which the sudden thickening of extensional viscosity is remarkable. The study is important, since it should enable better understanding and modelling of viscoelastic flows that involve dilute polymer solutions, or fluids with similar rheology; biofluid mechanics being one area of application of this research. Corroboration of experimental flow visualization with numerical simulation is

  17. Alterations in expression of Cat-315 epitope of perineuronal nets during normal ageing, and its modulation by an open-channel NMDA receptor blocker, memantine.

    Science.gov (United States)

    Yamada, Jun; Ohgomori, Tomohiro; Jinno, Shozo

    2017-03-08

    The perineuronal net (PNN), a specialized aggregate of the extracellular matrix, is involved in neuroprotection against oxidative stress, which is now recognized as a major contributor to age-related decline in brain functions. In this study, we investigated the age-related molecular changes of PNNs using monoclonal antibody Cat-315, which recognizes human natural killer-1 (HNK-1) glycan on aggrecan-based PNNs. Western blot analysis showed that the expression levels of Cat-315 epitope in the hippocampus were higher in middle-aged (MA, 12-month-old) mice than in young adult (YA, 2-month-old) mice. Although there were no differences in the expression levels of Cat-315 epitope between old age (OA, 20-month-old) and MA mice, Cat-315 immunoreactivity was also detected in astrocytes of OA mice. To focus on Cat-315 epitope in PNNs, we used YA and MA mice in the following experiments. Optical disector analysis showed that there were no differences in the numbers of Cat-315-positive (Cat-315(+) ) PNNs between YA and MA mice. Fluorescence intensity analysis indicated that Cat-315 immunoreactivity in PNNs increased with age in the dorsal hippocampus, which is mainly involved in cognitive functions. Administration of an open-channel blocker of NMDA receptor, memantine, reduced the expression levels of Cat-315 epitope in the hippocampus. Furthermore, the numbers of glutamatergic and GABAergic terminals colocalized with Cat-315 epitope around parvalbumin-positive neurons were decreased by memantine. These findings provide novel insight into the involvement of PNNs in normal brain ageing, and suggest that memantine may counteract the age-related alterations in expression levels of Cat-315 epitope via regulation of its subcellular localization. This article is protected by copyright. All rights reserved.

  18. Predictability of tracer dilution in large open channel flows: Analytical solution for the coefficient of variation of the depth-averaged concentration

    Science.gov (United States)

    Pannone, Marilena

    2014-03-01

    A large-time analytical solution is proposed for the spatial variance and coefficient of variation of the depth-averaged concentration due to instantaneous, cross sectionally uniform solute sources in pseudorectangular open channel flows. The mathematical approach is based on the use of the Green functions and on the Fourier decomposition of the depth-averaged velocities, coupled with the method of the images. The variance spatial trend is characterized by a minimum at the center of the mass and two mobile, decaying symmetrical peaks which, at very large times, are located at the inflexion points of the average Gaussian distribution. The coefficient of variation, which provides an estimate of the expected percentage deviation of the depth-averaged point concentrations about the section-average, exhibits a minimum at the center which decays like t-1 and only depends on the river diffusive time scale. The defect of cross-sectional mixing quickly increases with the distance from the center, and almost linearly at large times. Accurate numerical Lagrangian simulations were performed to validate the analytical results in preasymptotic and asymptotic conditions, referring to a particularly representative sample case for which cross-sectional depth and velocity measurements were known from a field survey. In addition, in order to discuss the practical usefulness of computing large-time concentration spatial moments in river flows, and resorting to directly measured input data, the order of magnitude of section-averaged concentrations and corresponding coefficients of variation was estimated in field conditions and for hypothetical contamination scenarios, considering a unit normalized mass impulsively injected across the transverse section of 81 U.S. rivers.

  19. 明渠网络中基于带权Lyapunov函数的边界反馈控制稳定性%Stability of Boundary Feedback Control Based on Weighted Lyapunov Function in Networks of Open Channels

    Institute of Scientific and Technical Information of China (English)

    岑丽辉; 席裕庚

    2009-01-01

    A Lyapunov function is constructed based on the weighted sum of entropies for the case of two open channels in cascade, which is described by the Saint-Venant equations. A class of boundary feedback controllers is presented to guaran-tee the local closed-loop asymptotic stability in a neighborhood of the equilibrium point by means of the Lyapunov design ap-proach.

  20. 四川南向开放与国际通道建设院一个研究综述%Southward Opening-up and International Channel Construction of Sichuan:A Literature Review

    Institute of Scientific and Technical Information of China (English)

    周俊

    2014-01-01

    The pattern of opening-up in China is shown as an echelon manner from the south to the north China, from the east to the west and from the coastal region to the inland. Based on the changes of situation both home and abroad, the strategy of opening-up in China turns from the eastern coastal regions, key development regions before, to Westward and Southward Opening-up and Coast and Inland Advancing Abreast. The opening-up of Sichuan started rather late in the national strategic plan. Scholars have made certain researches on the strategic status and significance of Sichuan in the opening-up pattern of China, but their studies laid emphasis on different aspects and started from different perspectives. The research on the southward opening-up of Sichuan focuses on the economic and trade relationship between Sichuan and the Associate of South East Asia Countries and the South Asia. However, the study of the international Channel construction, which is the bottleneck of the southward opening-up of Sichuan, needs more work and efforts. As a significant supporting condition of southward opening-up of Sichuan, it is of great strategy to deepen the research. The research on southward opening-up and international channel construction of Sichuan must be strengthened in the future, including tight correlation analysis of southward opening-up and international channel construction of Sichuan, the breakthrough direction, basic framework and tactics of southward opening-up of Sichuan after the international financial crisis as well as the routes and strategies of the international channel construction.%中国对外开放格局是沿着由南向北、由东西向、由沿海沿边向内地逐步梯次展开的。根据国内外形势的变化,中国的对外开放战略由东部沿海为重点逐步转向“西进南下”和“海陆并进”。四川的对外开放在国家战略层面上起步较晚。学者们对四川在中国对外开放中的战略地位和意义有所研

  1. Flow Resistance in Open Channels and Limits of Applicability of Manning's Formula; Resistencia al flujo en canales y limites de aplicabilidad de la formula de manning

    Energy Technology Data Exchange (ETDEWEB)

    Aldama, Alvaro A; R Ocon, Afredo [Instituto Mexicano de Tecnologia del Agua, Jiutepec, Morelos (Mexico)

    2002-03-01

    The concepts involved in the estimation of flow resistance in open channels are reviewed. In particular, of expressions for the friction factor that allow the derivation of expressions for the friction factor that appears in Darcy-Weisbach's formula for circular channels flowing full or at a depth equal half the diameter, and for wide channels, conveying hydraulically rough, fully turbulent flow. The results of such analyses show that it is possible to avoid adjustments to the numerical values that appear in Colebrook's formula, in order to reproduce experimental data. They also make it possible to explain the empirical dispersion observed in the values of the parameters of an expression used to estimate the Darcy-Weisbach friction coefficient for wide channels. On the basis of these results, the range of validity for Manning's formula is determined. Finally, additional evidence is provided in the estimation of flow resistance in open channels, being well represented by the hydraulic radius alone. This observation allows to foresees the possibility of developing a universally valid formula for the Darcy-Weisbach friction factor, applicable to flow in open channels. [Spanish] Se revisan los conceptos involucrados en la estimacion de la resistencia al flujo en canales. En particular, se senalan los inconvenientes de la popular formula de Manning. Tambien se presentan analisis teoricos que permiten determinar expresiones para el factor de friccion de la formula de Darcy-Weisbach para canales circulares trabajando llenos a la mitad, y para canales anchos conduciendo flujo hidraulicamente rugoso con turbulencia desarrollada. Se demuestra que los resultados de dichos analisis permiten evitar hacer ajustes en los valores numericos que aparecen en la formula de Colebrook, a fin de reproducir observaciones experimentales. Asimismo, hacen posible explicar la dispersion experimental en los valores de los parametros que aparecen en una expresion para el calculo

  2. Restoration of the response of the middle cerebral artery of the rat to acidosis in hyposmotic hyponatremia by the opener of large-conductance calcium sensitive potassium channels (BKCa).

    Science.gov (United States)

    Aleksandrowicz, Marta; Dworakowska, Beata; Dolowy, Krzysztof; Kozniewska, Ewa

    2017-09-01

    Hyposmotic hyponatremia (the decrease of extracellular concentration of sodium ions from 145 to 121 mM and the decrease of hyposmolality from 300 to 250 mOsm/kg H2O) impairs response of the middle cerebral artery (MCA) to acetylcholine and NO donor (S-nitroso-N-acetyl-DL-penicillamine). Since acidosis activates a similar intracellular signaling pathway, the present study was designed to verify the hypothesis that the response of the MCA to acidosis is impaired during acute hyposmotic hyponatremia due to abnormal NO-related signal transduction in vascular smooth muscle cells. Studies performed on isolated, cannulated, and pressurized rat MCA revealed that hyposmotic hyponatremia impaired the response of the MCA to acidosis and this was associated with hyposmolality rather than with decreased sodium ion concentration. Response to acidosis was restored by the BKCa but not by the KATP channel activator. Patch-clamp electrophysiology performed on myocytes freshly isolated from MCAs, demonstrated that hyposmotic hyponatremia does not affect BKCa currents but decreases the voltage-dependency of the activation of the BKCa channels in the presence of a specific opener of these channels. Our study suggests that reduced sensitivity of BKCa channels in the MCA to agonists results in the lack of response of this artery to acidosis during acute hyposmotic hyponatremia.

  3. K(v)7 channels: function, pharmacology and channel modulators.

    Science.gov (United States)

    Dalby-Brown, William; Hansen, Henrik H; Korsgaard, Mads P G; Mirza, Naheed; Olesen, Søren-P

    2006-01-01

    K(v)7 channels are unique among K(+) channels, since four out of the five channel subtypes have well-documented roles in the development of human diseases. They have distinct physiological functions in the heart and in the nervous system, which can be ascribed to their voltage-gating properties. The K(v)7 channels also lend themselves to pharmacological modulation, and synthetic openers as well as blockers of the channels, regulating neuronal excitability, have existed even before the K(v)7 channels were identified by cloning. In the present review we give an account on the focused efforts to develop selective modulators, openers as well as blockers, of the K(v)7 channel subtypes, which have been undertaken during recent years, along with a discussion of the K(v)7 ion channel physiology and therapeutic indications for modulators of the neuronal K(v)7 channels.

  4. Calculation of the critical velocity and the critical slope of trailing hydro-transport in open channels%尾矿流槽临界流速和临界坡度计算

    Institute of Scientific and Technical Information of China (English)

    胡去劣; 熊梦婕

    2011-01-01

    The minimun flow rate which can keep the open channel without siltation is called “the critical velocity”. It is significant to the design of trailing hydro-transport. According to the assumption of the minimum energy loss of the muddy water under the critical condition, a formula is obtained by using the differential method in maths. Based on both theory and experiments, the derivation process of this formula is clear and correct. Many factors such as the characteristic parameters of the open channel and the two-phase-flow have been considered,which makes the formula more comprehensive. Meanwhile, it is also in good agreement with the experiment outcome that 94% of the test records are close to the calculation results. So this formula can be applied to multifarious working conditions in trailing hydro-transport projects. In general, this research has solved a special engineering problem successfully and it will be useful to the design of the critical velocity and critical slope of the trailing hydro-transport in open channels.%尾矿流槽保持不淤的最小流速称为临界流速,该流速对流槽设计有着重要意义.在浑水流动能量损失方程基础上,根据浑水流动临界流速的理念,采用求极值的方法,推得临界流速公式.该式综合了流槽与二相流的特性,考虑的因素较全面.并将计算结果与试验数据相比较,对比147个试验数据,其中计算相对误差小于10%的约占94%,说明该式的计算精度较高.

  5. 旋转式明渠流综合实验平台研制与应用%Development and application of comprehensive experiment platform for rotatable open channel flow

    Institute of Scientific and Technical Information of China (English)

    戎贵文; 袁岳; 肖柏青; 许光泉

    2015-01-01

    In order to cultivate the innovative ability of college students and overcome the disadvantages in the experiment device of single open channel flow,such as simple experiment content,occupation of large area,and high cost,a comprehensive experi-ment platform for rotatable open channel flow was developed based on the conventional hydraulic experiment apparatus and bas-ic principle of fluid flow.The experiment platform used the rotatable method to integrate different open channel flow experi-ments,which can meet the demand of conducting various conventional open channel flow experiments in the same platform,and the demand of modern teaching including the comprehensive,designed,and innovative training plans.The platform has the ad-vantages of perfect design,complete function,and convenient reestablishment,which is of important significance for the cultiva-tion of innovative talents with water conservancy major.%为了培养大学生创新能力和克服单个明渠流实验装置测试内容单一、占地大、成本高等缺陷,在研究传统水力学实验装置和流体运动基本原理的基础上,自主研制开发了一套旋转式明渠流综合实验平台。该实验平台采用旋转方式创造性地将多种明渠水流实验集为一身,能够满足学生在同一实验平台上进行多种常规明渠流实验的需求,从而满足高校综合性、设计性、创新创业训练计划等现代教学的要求。实践表明,该实验平台具有设计巧妙、功能齐全、改造方便等优点,对水利类专业构建创新型人才培养模式有重要意义。

  6. Glucose- and interleukin-1beta-induced beta-cell apoptosis requires Ca2+ influx and extracellular signal-regulated kinase (ERK) 1/2 activation and is prevented by a sulfonylurea receptor 1/inwardly rectifying K+ channel 6.2 (SUR/Kir6.2) selective potassium channel opener in human islets

    DEFF Research Database (Denmark)

    Maedler, Kathrin; Størling, Joachim; Sturis, Jeppe

    2004-01-01

    -regulated kinase (ERK) 1/2, an effect that was abrogated by 3 micromol/l NN414. Similarly, 1 micromol/l of the mitogen-activated protein kinase/ERK kinase 1/2 inhibitor PD098059 or 1 micromol/l of the l-type Ca(2+) channel blocker nimodipine prevented glucose- and IL-1beta-induced ERK activation, beta......Increasing evidence indicates that a progressive decrease in the functional beta-cell mass is the hallmark of both type 1 and type 2 diabetes. The underlying causes, beta-cell apoptosis and impaired secretory function, seem to be partly mediated by macrophage production of interleukin (IL)-1beta...... and/or high-glucose-induced beta-cell production of IL-1beta. Treatment of type 1 and type 2 diabetic patients with the potassium channel opener diazoxide partially restores insulin secretion. Therefore, we studied the effect of diazoxide and of the novel potassium channel opener NN414, selective...

  7. A Methodology for Measuring Voice Quality Using PESQ and Interactive Voice Response in the GSM Channel Designed by OpenBTS

    Directory of Open Access Journals (Sweden)

    Pavol Partila

    2013-01-01

    Full Text Available This article discusses a methodology for rating the quality of mobile calls. Majority telecommunications service from the perspective of the whole world is using mobile telephony networks. One of the problems affecting this service and its quality are landscape barriers, which prevent the spread signal. Price and complex construction of classic BTS does not allow their dense distribution. In such cases, one solution is to use OpenBTS technology. Design of OpenBTS is more available, so it can be applied to much more places and more complex points. Purpose of this measurement is a model for effective stations deployment, due to shape and distribution of local barriers that reduce signal power, and thus the quality of speech. GSM access point for our mobile terminals is OpenBTS USRP N210 station. The PESQ method for evaluating of speech quality is compared with the subjective evaluation, which provides Asterisk PBX with IVR call back. Measurement method was taken into account the call quality depending on terminal position. The measured results and its processing bring knowledge to use this technology for more complicated locations with degraded signal level and increases the quality of voice services in telecommunications.

  8. BK channel modulators: a comprehensive overview

    DEFF Research Database (Denmark)

    Nardi, Antonio; Olesen, Søren-Peter

    2008-01-01

    and blockers 4) Marketed and/or investigational drugs with BK-modulating side properties and structural analogues 5) Naturally-occurring BK channel openers and structural analogues 6) Synthetic BK channel openers. This review is intended to provide readers with current opinion on the BK channel as a drug...

  9. A model to investigate the influence of suspended sediment on the mass transport of a pollutant in open channel flow. M.S. Thesis - Old Dominion Univ.

    Science.gov (United States)

    Chapman, R. S.

    1977-01-01

    An explicit two-dimensional finite difference model, designed to investigate the influence of suspended sediment on the pollutant transport process, is presented. Specific attention is directed toward examining the role of suspended sediment in: (1) the turbulent vertical transport mechanism in a stratified flow, and (2) pollutant uptake due to sorption. Results presented indicate that suspended sediment plays a major role in the pollutant transport process, and subsequently, any meaningful attempt to model the fate of a pollutant in an alluvial channel must account for the presence of a suspended sediment concentration profile. Similarly, the vertical and longitudinal pollutant concentration distributions provided by the model may be utilized to improve upon the predictive capacities of existing water quality models.

  10. Niflumic acid hyperpolarizes the smooth muscle cells by opening BK(Ca) channels through ryanodine-sensitive Ca(2+) release in spiral modiolar artery.

    Science.gov (United States)

    Li, Li; Ma, Ke-Tao; Zhao, Lei; Si, Jun-Qiang

    2008-12-25

    The mechanism by which niflumic acid (NFA), a Cl(-) channel antagonist, hyperpolarizes the smooth muscle cells (SMCs) of cochlear spiral modiolar artery (SMA) was explored. Guinea pigs were used as subjects and perforated patch clamp and intracellular recording technique were used to observe NFA-induced response of SMC in the acutely isolated SMA preparation. The results showed that bath application of NFA, indanyloxyacetic acid 94 (IAA-94) and disodium 4,4'-diisothiocyanatostilbene-2,2'-disulfonate (DIDS) caused hyperpolarization and evoked outward currents in all cells at low resting potential (RP), but had no effects in cells at high RP. In the low RP SMCs, the average RP was about (-42.47+/-1.38) mV (n=24). Application of NFA (100 mumol/L), IAA-94 (10 mumol/L) and DIDS (200 mumol/L) shifted the RP to (13.7+/-4.3) mV (n=9, P<0.01), (11.4+/-4.2) mV (n=7, P<0.01) and (12.3+/-3.7) mV (n=8, P<0.01), respectively. These drug-induced responses were in a concentration-dependent manner. NFA-induced hyperpolarization and outward current were almost blocked by charybdotoxin (100 nmol/L), iberiotoxin (100 nmol/L), tetraethylammonium (10 mmol/L), BAPTA-AM (50 mumol/L), ryanodine (10 mumol/L) and caffeine (0.1-10 mmol/L), respectively, but not by nifedipine (100 mumol/L), CdCl2 (100 mumol/L) and Ca(2+)-free medium. It is concluded that NFA induces a release of intracellular calcium from the Ca(2+) stores and the released intracellular calcium in turn causes concentration-dependent and reversible hyperpolarization and evokes outward currents in the SMCs of the cochlear SMA via activation of the Ca(2+)-activated potassium channels.

  11. “Eyes Open – Eyes Closed” EEG/fMRI data set including dedicated “Carbon Wire Loop” motion detection channels

    Directory of Open Access Journals (Sweden)

    Johan van der Meer

    2016-06-01

    This paper also links to an EEGlab “EEGLAB: an open source toolbox for analysis of single-trial EEG dynamics including independent component analysis” (Delorme and Makeig, 2004 [2] plugin to perform a CWL regression approach to deal with the He pump artifact, as published in the main paper “Carbon-wire loop based artifact correction outperforms post-processing EEG/fMRI corrections-A validation of a real-time simultaneous EEG/fMRI correction method” (van der Meer et al., 2016 [3].

  12. RESEARCH AND APPLICATIONS OF REAL -TIME MONITORING TECHNOLOGY FOR WATER LEVEL AND DISCHARGE OF OPEN CHANNEL IN IRRIGATION DISTRICT%灌区明渠水位流量实时监测技术研究与应用

    Institute of Scientific and Technical Information of China (English)

    马腾远; 张庆; 宋玉娟; 王贵田; 马树升

    2011-01-01

    Real-time monitoring water level and discharge of open channel in irrigation district is critical to improve water saving and crop water productivity with quantitative irrigation. In this paper, the necessary components in the monitoring system: water level sensor, ultrasonic flowmeter, data acquisition and flow calculation software and data communication system are described in detail.%灌区明渠水位流量监测对于计量灌溉促进灌区节水和提高作物水分生产率意义重大.本文就监测系统中必备的水位传感器、明渠超声波流量计、数据采集及流量积算软件及数据通信系统等进行了详细阐述.

  13. Study on influence of intake open channel arrangement form on temperature rise of cooling water%电厂取水明渠布置形式对取水温升的影响研究

    Institute of Scientific and Technical Information of China (English)

    刘海成; 陈汉宝

    2011-01-01

    文章以印尼某燃煤电厂工程为背景,研究了取排水明渠的不同布置形式对温排水扩散趋势和取水口温升的影响.并对原设计方案进行优化,在取水温升满足设计要求的条件下使工程更为经济合理.可为类似工程提供参考.%Based on the background of a coal-fired power plant project in Indonesia, the influence of intake open channel arrangement form on the temperature rise of cooling water was studied.Then the original design scheme was optimized in a more economical and rational way .That provides a reference for similar projects.

  14. Application of Microsoft Excel Algorithm in Design of Open Channel%基于 Microsoft Excel 试算法在明渠工程设计中的应用

    Institute of Scientific and Technical Information of China (English)

    胡建春; 何茜

    2015-01-01

    在水利工程明渠的设计中,高阶方程需要通过试算法求解,用传统的计算器人工计算,计算参数多、工作量大,且精确度不够。用Microsoft Excel工具进行试算则方便、快捷、计算精确度高,可为工程设计提供便捷准确的计算结果。以渠道水深计算案例,通过对Microsoft Excel单元格公式的编辑,探讨Microsoft Excel试算的具体方法。%In the design of open channel in water conservancy project , the high order equation should be solved by algorithm because it is difficult to solve directly by traditional manual calculation due to its multi -parameter calculation , heavy work-load and low precision .The algorithm by Microsoft Excel provides convenient , fast and accurate calculating results for engi-neering design .The trial method based on Microsoft Excel is illustrated in the paper to calculate channel depth by spread -sheet formula editing of Microsoft Excel .

  15. Numerical optimization of a three-channel radiofrequency coil for open, vertical-field, MR-guided, focused ultrasound surgery using the hybrid method of moment/finite difference time domain method.

    Science.gov (United States)

    Xin, Xuegang; Wang, Di; Han, Jijun; Feng, Yanqiu; Feng, Qianjin; Chen, Wufan

    2012-07-01

    The numerical optimization of a three-channel radiofrequency (RF) coil with a physical aperture for the open, vertical-field, MR-guided, focused ultrasound surgery (MRgFUS) system using the hybrid method of moment (MoM)/finite difference time domain (FDTD) method is reported. The numerical simulation of the current density distribution on an RF coil with a complicated irregular structure was performed using MoM. The electromagnetic field simulation containing the full coil-tissue interactions within the region of interest was accomplished using the FDTD method. Huygens' equivalent box with six surfaces smoothly connected the MoM and FDTD method. An electromagnetic model of the human pelvic region was reconstructed and loaded in the FDTD zone to optimize the three-channel RF coil and compensate for the lower sensitivity at the vertical field. In addition, the numerical MoM was used to model the resonance, decoupling and impedance matching of the RF coil in compliance with engineering practices. A prototype RF coil was constructed to verify the simulation results. The results demonstrate that the signal-to-noise ratio and the homogeneity of the B(1) field were both greatly improved compared with previously published results.

  16. Cardiac potassium channel subtypes

    DEFF Research Database (Denmark)

    Schmitt, Nicole; Grunnet, Morten; Olesen, Søren-Peter

    2014-01-01

    that they could constitute targets for new pharmacological treatment of atrial fibrillation. The interplay between the different K(+) channel subtypes in both atria and ventricle is dynamic, and a significant up- and downregulation occurs in disease states such as atrial fibrillation or heart failure......About 10 distinct potassium channels in the heart are involved in shaping the action potential. Some of the K(+) channels are primarily responsible for early repolarization, whereas others drive late repolarization and still others are open throughout the cardiac cycle. Three main K(+) channels...... drive the late repolarization of the ventricle with some redundancy, and in atria this repolarization reserve is supplemented by the fairly atrial-specific KV1.5, Kir3, KCa, and K2P channels. The role of the latter two subtypes in atria is currently being clarified, and several findings indicate...

  17. Targeting at SUR2B/Kir6.1 subtype of ATP-sensitive potassium channel opener natakalim improves pressure overload-induced heart failure

    Institute of Scientific and Technical Information of China (English)

    TANG Yuan; LONG Chao-liang; WANG Hai

    2008-01-01

    Objective To explore the new stratigies targeting at SUR2B/Kir6.1 subtype against pressure overload-induced heart failure. Methods Pressure overload-induced heart failure was induced in Wistar rat by abdominal aortic banding (AAB) .The effects of natakalim (1,3, 9 mg·kg-1·d-1, 10 weeks) were assessed on myocardial hypertrophy and heart failure, cardiac histology, vasoactive compounds, and gene expression. Isolated working heart and isolated tail artery helical strips were used to examine the influence of natakalim on heart and resistant vessels. Results Ten weeks after the onset of pressure overload, natakalim therapy potently inhibited cardiac hypertrophy and prevented heart failure. Natakalim inhibited the changes of left ventricular haemodynamic parameters, reversed the increase of heart mass index, left ventricular weight index and lung weight index remarkably. Histological examination demonstrated that there were no significant hypertrophy and fibrosis in hearts of pressure overload rat treated with natakalim. Ultrastructural examination of heart revealed well-organized myofibrils with mitochondria grouped along the periphery of longitudinally oriented fibers in natakalim group rats. The content of serum NO and plasma PGI2 was increased, while that of plasma ET-1 and cardiac tissue hydroxyproline, ANP and BNP mRNA was down-regulated in natakalim-treated rats. Natakalim at concentrations ranging from 0.01-100 μM had no effects on isolated working heart derived from Wistar rats; however, natakalim had endothelium-dependent vasodilation effects on the isolated tail artery helical strips precontracted with NE. Conclusions These results indicate that natakalim improves heart failure due to pressure overload by activating KATP channel SUR2B/Kir6.1 subtype and reversing endothelial dysfunction.

  18. Insights into an intriguing gas sorption mechanism in a polar metal–organic framework with open-metal sites and narrow channels

    KAUST Repository

    Forrest, Katherine A.

    2014-01-01

    Simulations of H2 and CO2 sorption were performed in the metal-organic framework (MOF), [Cu(Me-4py-trz-ia)]. This MOF was recently shown experimentally to exhibit high uptake for H2 and CO2 sorption and this was reproduced and elucidated through the simulations performed herein. Consistent with experiment, the theoretical isosteric heat of adsorption, Qst, values were nearly constant across all loadings for both sorbates. The simulations revealed that sorption directly onto the open-metal sites was not observed in this MOF, ostensibly a consequence of the low partial positive charges of the Cu2+ ions as determined through electronic structure calculations. Sorption was primarily observed between adjacent carboxylate oxygen atoms (site 1) and between nearby methyl groups (site 2) of the organic linkers. In addition, saturation of the most energetically favorable sites (site 1) is possible only after filling a nearby site (site 2) first due to the MOF topology. This suggests that the lack of dependence on loading for the Qst is due to the concurrent filling of sites 1 and 2, leading to an observed average Qst value. © 2014 the Partner Organisations.

  19. Insights into an intriguing gas sorption mechanism in a polar metal-organic framework with open-metal sites and narrow channels.

    Science.gov (United States)

    Forrest, Katherine A; Pham, Tony; McLaughlin, Keith; Hogan, Adam; Space, Brian

    2014-07-14

    Simulations of H2 and CO2 sorption were performed in the metal-organic framework (MOF), [Cu(Me-4py-trz-ia)]. This MOF was recently shown experimentally to exhibit high uptake for H2 and CO2 sorption and this was reproduced and elucidated through the simulations performed herein. Consistent with experiment, the theoretical isosteric heat of adsorption, Q(st), values were nearly constant across all loadings for both sorbates. The simulations revealed that sorption directly onto the open-metal sites was not observed in this MOF, ostensibly a consequence of the low partial positive charges of the Cu(2+) ions as determined through electronic structure calculations. Sorption was primarily observed between adjacent carboxylate oxygen atoms (site 1) and between nearby methyl groups (site 2) of the organic linkers. In addition, saturation of the most energetically favorable sites (site 1) is possible only after filling a nearby site (site 2) first due to the MOF topology. This suggests that the lack of dependence on loading for the Q(st) is due to the concurrent filling of sites 1 and 2, leading to an observed average Q(st) value.

  20. Surface vacancy channels through ion channeling

    Energy Technology Data Exchange (ETDEWEB)

    Redinger, Alex; Standop, Sebastian; Michely, Thomas [II. Physikalisches Institut, Universitaet Koeln, Zuelpicher Strasse 77, 50937 Koeln (Germany); Rosandi, Yudi; Urbassek, Herbert M. [Fachbereich Physik, Technische Universitaet Kaiserslautern, Erwin-Schroedinger-Strasse, D-67663 Kaiserslautern (Germany)

    2009-07-01

    Damage patterns of single ion impacts on Pt(111) have been studied by scanning tunneling microscopy (STM) and molecular dynamics simulations (MD). Low temperature experiments, where surface diffusion is absent, have been performed for argon and xenon ions with energies between 1 keV and 15 keV at an angle of incidence of 86 {sup circle} measured with respect to the surface normal. Ions hitting preexisting illuminated step edges penetrate into the crystal and are guided in open crystallographic directions, one or more layers underneath the surface (subsurface channeling). In the case of argon channeling the resulting surface damage consists of adatom and vacancy pairs aligned in ion beam direction. After xenon channeling thin surface vacancy trenches along the ion trajectories - surface vacancy channels - are observed. They result from very efficient sputtering and adatom production along the ion trajectory. This phenomena is well reproduced in molecular dynamics simulations of single ion impacts at 0 K. The damage patterns of Argon and Xenon impacts can be traced back to the different energy losses of the particles in the channel. Channeling distances exceeding 1000 A for 15 keV xenon impacts are observed.

  1. Mimicking multi-channel scattering with single-channel approaches

    OpenAIRE

    Grishkevich, Sergey; Schneider, Philipp-Immanuel; Vanne, Yulian V.; Saenz, Alejandro

    2009-01-01

    The collision of two atoms is an intrinsic multi-channel (MC) problem as becomes especially obvious in the presence of Feshbach resonances. Due to its complexity, however, single-channel (SC) approximations, which reproduce the long-range behavior of the open channel, are often applied in calculations. In this work the complete MC problem is solved numerically for the magnetic Feshbach resonances (MFRs) in collisions between generic ultracold 6Li and 87Rb atoms in the ground state and in the ...

  2. Course on Ionic Channels

    CERN Document Server

    1986-01-01

    This book is based on a series of lectures for a course on ionic channels held in Santiago, Chile, on November 17-20, 1984. It is intended as a tutorial guide on the properties, function, modulation, and reconstitution of ionic channels, and it should be accessible to graduate students taking their first steps in this field. In the presentation there has been a deliberate emphasis on the spe­ cific methodologies used toward the understanding of the workings and function of channels. Thus, in the first section, we learn to "read" single­ channel records: how to interpret them in the theoretical frame of kinetic models, which information can be extracted from gating currents in re­ lation to the closing and opening processes, and how ion transport through an open channel can be explained in terms of fluctuating energy barriers. The importance of assessing unequivocally the origin and purity of mem­ brane preparations and the use of membrane vesicles and optical tech­ niques in the stUGY of ionic channels a...

  3. 弯道局部非淹没刚性植被水流特性研究%Flow characteristics in curved open channels with partial non-submerged rigid vegetation

    Institute of Scientific and Technical Information of China (English)

    李成光; 槐文信; 杨洪武

    2012-01-01

    Flow characteristics in a 180°curved open channel with partial non-submerged rigid vegeta- tion was studied. Reinforcing steel bars were used to simulate the natural vegetation. The 3D Doppler ultrasound anemometer was adopted to measure the flow velocities both in the case of vegetation andnon-vegetation. 3D velocity and turbulent kinetic energy data were obtained and compared for both ca- ses. The results show that the existence of vegetation changes the velocity distribution profile and internal flow structures in curved reach. In addition, the depth-averaged model is used to simulate thevegetation flow based on the equivalent resistance coefficient method. The calculation results are in good agreement with the experimental data, which shows that the numerical format can effectively predict the flow characteristics in curved open channels.%摘要对180°弯道局部长有非淹没刚性植被的水流特性进行了研究.用钢筋来模拟天然河道的刚性植被,采用三维多普勒超声流速仪(ADV)分别对无植被和局部有非淹没刚性植被2种情况下的弯道水流流速场进行了测量,得到了水流沿程各断面的三维流速和紊动能分布,对2种情形的试验资料进行了比较.结果表明:植被的存在使得弯道流速重新分布,水流内部结构发生明显改变.基于等效阻力系数法,采用水深平均模型对局部非淹没刚性植被水流进行了二维数值模拟,计算结果与试验数据基本一致,表明该数值格式能预测弯道植被水流的特性.

  4. Single-channel kinetics of BK (Slo1 channels

    Directory of Open Access Journals (Sweden)

    Yanyan eGeng

    2015-01-01

    Full Text Available Single-channel kinetics has proven a powerful tool to reveal information about the gating mechanisms that control the opening and closing of ion channels. This introductory review focuses on the gating of large conductance Ca2+- and voltage-activated K+ (BK or Slo1 channels at the single-channel level. It starts with single-channel current records and progresses to presentation and analysis of single-channel data and the development of gating mechanisms in terms of discrete state Markov (DSM models. The DSM models are formulated in terms of the tetrameric modular structure of BK channels, consisting of a central transmembrane pore-gate domain (PGD attached to four surrounding transmembrane voltage sensing domains (VSD and a large intracellular cytosolic domain (CTD, also referred to as the gating ring. The modular structure and data analysis shows that the Ca2+ and voltage dependent gating considered separately can each be approximated by 10-state two-tiered models with 5 closed states on the upper tier and 5 open states on the lower tier. The modular structure and joint Ca2+ and voltage dependent gating are consistent with a 50 state two-tiered model with 25 closed states on the upper tier and 25 open states on the lower tier. Adding an additional tier of brief closed (flicker states to the 10-state or 50-state models improved the description of the gating. For fixed experimental conditions a channel would gate in only a subset of the potential number of states. The detected number of states and the correlations between adjacent interval durations are consistent with the tiered models. The examined models can account for the single-channel kinetics and the bursting behavior of gating. Ca2+ and voltage activate BK channels by predominantly increasing the effective opening rate of the channel with a smaller decrease in the effective closing rate. Ca2+ and depolarization thus activate by mainly destabilizing the closed states.

  5. Experimental Investigation into Axial Compressive Behavior of Cold Formed Thin-Walled Steel Columns with Lipped Channel and Openings%开孔冷弯薄壁卷边槽钢柱轴压性能的试验研究

    Institute of Scientific and Technical Information of China (English)

    姚永红; 武振宇; 成博; 邓君宝

    2011-01-01

    为研究腹板开孔具中间加劲肋的冷弯薄壁卷边槽钢构件的受压性能,对两种截面形式的短柱和中长柱共计16根轴压构件的承载力和屈曲模式进行了试验分析.结果表明:所有试件均发生畸变屈曲失效,中长柱试件还伴随有绕弱轴的整体弯曲;腹板孔洞导致构件屈曲模式发生变化,孔洞周边板件有局部屈曲产生;孔洞的存在使试件承载力降低,短柱试件承载力的减小幅度比中长柱试件的大;同组试件中畸变初始缺陷大的,一般承载力较小,畸变变形偏大;极限承载力下开孔构件的畸变变形一般大于未开孔构件.文中还对所有试件进行了有限元模拟,发现有限元分析结果与试验值吻合较好.%In order to investigate the compression behavior of the cold-formed thin-walled steel columns with lipped channel, intermediate stiffener and openings in the web, 16 axial compressive members, including the short and the medium-length columns in two section forms, were experimentally analyzed in the aspects of bearing capacity and buckling mode. The results show that all of the specimens fail due to the distortional buckling and the medium-length columns have additional overall bending around the weak axis, that the openings in the web result in the changes of buckling modes of the members and the local bucklings of the plates occur around the openings, and that, due to the effects of the openings, the bearing capacities of the specimens decrease and the decrement of the bearing capacity of the short column is greater than that of the medium-length one. Moreover, it is found that, for the specimens in the same test group, the columns with larger initial distortional imperfections are of lower bearing capacities and greater deformations induced by the distortional bucklings, and that the openings generally enhance the deformations corresponding to the ultimate bearing capacity. In addition, all of the tested specimens

  6. Kinematic characteristics of horseshoe vortex upstream of circular cylinders in open channel flow%明渠柱体上游马蹄涡的运动学特征研究

    Institute of Scientific and Technical Information of China (English)

    陈启刚; 齐梅兰; 李金钊

    2016-01-01

    To investigate the kinematic characteristics of horseshoe vortex upstream of cylinders, the swirl⁃ing strength method is introduced to identify horseshoe vortices, and a method of fitting the local velocity field with an elliptic vortex are proposed to characterize these vortices. The elliptic vortex is constructed by overlapping the Oseen vortex with an inclined unidirectional shear flow. The proposed methods were used to investigate the time-averaged horseshoe vortex upstream of a circular cylinder in open channel flow. The time averaged horseshoe vortex is captured by averaging instantaneous velocity fields measured with PIV. The results show that, in flows with cylinder Reynolds number larger than 104, the position of horseshoe vortex is unchanged while the upstream separation point moves downstream slowly. The distances from the vortex center to the cylinder axis and the bed are 0.67D and 0.06D, respectively, with D being the cylin⁃der diameter. Comparing with those in open channel flows,the horseshoe vortex and separation point in tur⁃bulent boundary layers are further upstream. With the increasing of cylinder Reynolds number, the horse⁃shoe vortex strengthens itself but keeps the size unchanged, results in increasing shear stress on the bed. The dependence of vortex-induced shear stress with the flow strength indicates that it is physically reason⁃able to formulate equations for local scour based on the kinematic characteristics of horseshoe vortex.%马蹄涡是水下柱体结构周围床面冲刷的主要动力。为掌握马蹄涡的运动学特征,引入了基于旋转强度的马蹄涡识别方法,提出了基于椭圆涡拟合的马蹄涡特征提取方法,其中,椭圆涡由Oseen涡和倾斜单向剪切流叠加而成。基于上述方法,通过开展明渠圆柱绕流PIV实验,对柱体上游对称面时均流场中马蹄涡的运动学特征进行了研究。结果表明,在柱体雷诺数大于104的紊流柱体绕流中,

  7. Research and application of simple sill-shaped real-time open-channel flow measurement system%简易量水槛式明渠流量实时量测系统研究与应用

    Institute of Scientific and Technical Information of China (English)

    郑世宗; 高对对; 贾宏伟; 赵晓波

    2012-01-01

    基于灌区量水需要,研究提出了一种用简易量水槛、超声波水位计和GPRS传输模块等元件构成的明渠流量实时量测系统.文中重点介绍了该系统的技术原理、主要部件、技术特点、适用条件等.应用实践表明,该系统充分融合了传统量水手段(简易量水槛)适应性强、精度高、造价低的特点以及现代信息技术快速、便捷的优点,可满足现代灌区管理对农业用水计量与实时监控的要求.%Based the demand of the flow-measurement in irrigation district, a real-time open channel flow-measurement system consisting of simple flow-measuring sill, ultrasonic water level gauge, GPRS transmission module, etc. Is researched and put forward. The technical principle, main parts, technical characteristics, adaptable conditions of this system are emphatically described herein. The application practices show that both the characteristics of strong applicability, high accuracy and lower price of the traditional flow-measurement method (simple water flow-measuring sill) and the merits of quickness and convenience of the modern information technology are fully integrated together in this system, and then it can meet the requirements from the modern management of irrigation district on the measurement of agricultural water and its real-time monitoring.

  8. Ion channel stability and hydrogen bonding. Molecular modelling of channels formed by synthetic alamethicin analogues.

    Science.gov (United States)

    Breed, J; Kerr, I D; Molle, G; Duclohier, H; Sansom, M S

    1997-12-04

    Several analogues of the channel-forming peptaibol alamethicin have been demonstrated to exhibit faster switching between channel substates than does unmodified alamethicin. Molecular modelling studies are used to explore the possible molecular basis of these differences. Models of channels formed by alamethicin analogues were generated by restrained molecular dynamics in vacuo and refined by short molecular dynamics simulations with water molecules within and at either mouth of the channel. A decrease in backbone solvation was found to correlate with a decrease in open channel stability between alamethicin and an analogue in which all alpha-amino-isobutyric acid residues of alamethicin were replaced by leucine. A decrease in the extent of hydrogen-bonding at residue 7 correlates with lower open channel stabilities of analogues in which the glutamine at position 7 was replaced by smaller polar sidechains. These two observations indicate the importance of alamethicin/water H-bonds in stabilizing the open channel.

  9. Standard compliant channel selection scheme for TV white space networks

    CSIR Research Space (South Africa)

    Masonta, MT

    2014-08-01

    Full Text Available an open issue. In this paper, an Analytic Hierarchy Process (AHP) based scheme is proposed for optimal channel decision. The best channel is selected from a pool of available channels provided by the GSDB. Each channel is ranked based on the current class...

  10. Voltage-gated lipid ion channels

    DEFF Research Database (Denmark)

    Blicher, Andreas; Heimburg, Thomas Rainer

    2013-01-01

    Synthetic lipid membranes can display channel-like ion conduction events even in the absence of proteins. We show here that these events are voltage-gated with a quadratic voltage dependence as expected from electrostatic theory of capacitors. To this end, we recorded channel traces and current...... histograms in patch-experiments on lipid membranes. We derived a theoretical current-voltage relationship for pores in lipid membranes that describes the experimental data very well when assuming an asymmetric membrane. We determined the equilibrium constant between closed and open state and the open...... probability as a function of voltage. The voltage-dependence of the lipid pores is found comparable to that of protein channels. Lifetime distributions of open and closed events indicate that the channel open distribution does not follow exponential statistics but rather power law behavior for long open times...

  11. Mechanosensitive Channels

    Science.gov (United States)

    Martinac, Boris

    Living cells are exposed to a variety of mechanical stimuli acting throughout the biosphere. The range of the stimuli extends from thermal molecular agitation to potentially destructive cell swelling caused by osmotic pressure gradients. Cellular membranes present a major target for these stimuli. To detect mechanical forces acting upon them cell membranes are equipped with mechanosensitive (MS) ion channels. Functioning as molecular mechanoelectrical transducers of mechanical forces into electrical and/or chemical intracellular signals these channels play a critical role in the physiology of mechanotransduction. Studies of prokaryotic MS channels and recent work on MS channels of eukaryotes have significantly increased our understanding of their gating mechanism, physiological functions, and evolutionary origins as well as their role in the pathology of disease.

  12. The open boundary equation

    Directory of Open Access Journals (Sweden)

    D. Diederen

    2015-06-01

    Full Text Available We present a new equation describing the hydrodynamics in infinitely long tidal channels (i.e., no reflection under the influence of oceanic forcing. The proposed equation is a simple relationship between partial derivatives of water level and velocity. It is formally derived for a progressive wave in a frictionless, prismatic, tidal channel with a horizontal bed. Assessment of a large number of numerical simulations, where an open boundary condition is posed at a certain distance landward, suggests that it can also be considered accurate in the more natural case of converging estuaries with nonlinear friction and a bed slope. The equation follows from the open boundary condition and is therefore a part of the problem formulation for an infinite tidal channel. This finding provides a practical tool for evaluating tidal wave dynamics, by reconstructing the temporal variation of the velocity based on local observations of the water level, providing a fully local open boundary condition and allowing for local friction calibration.

  13. KCNQ4 channel activation by BMS-204352 and retigabine

    DEFF Research Database (Denmark)

    Schrøder, Rikke Louise K.; Jespersen, Thomas; Christophersen, P

    2001-01-01

    Activation of potassium channels generally reduces cellular excitability, making potassium channel openers potential drug candidates for the treatment of diseases related to hyperexcitabilty such as epilepsy, neuropathic pain, and neurodegeneration. Two compounds, BMS-204352 and retigabine, prese...

  14. Open access

    NARCIS (Netherlands)

    Valkenburg, P.M.

    2015-01-01

    Open access week Van 19 tot en met 25 oktober 2015 vond wereldwijd de Open Access Week plaats. Tijdens deze week werden er over de hele wereld evenementen georganiseerd waar open access een rol speelt. Ook in Nederland zijn er diverse symposia, workshops en debatten georganiseerd zoals het debat in

  15. MITOCHONDRIAL BKCa CHANNEL

    Directory of Open Access Journals (Sweden)

    Enrique eBalderas

    2015-03-01

    Full Text Available Since its discovery in a glioma cell line 15 years ago, mitochondrial BKCa channel (mitoBKCa has been studied in brain cells and cardiomyocytes sharing general biophysical properties such as high K+ conductance (~300 pS, voltage-dependency and Ca2+-sensitivity. Main advances in deciphering the molecular composition of mitoBKCa have included establishing that it is encoded by the Kcnma1 gene, that a C-terminal splice insert confers mitoBKCa ability to be targeted to cardiac mitochondria, and evidence for its potential coassembly with β subunits. Notoriously, β1 subunit directly interacts with cytochrome c oxidase and mitoBKCa can be modulated by substrates of the respiratory chain. mitoBKCa channel has a central role in protecting the heart from ischemia, where pharmacological activation of the channel impacts the generation of reactive oxygen species and mitochondrial Ca2+ preventing cell death likely by impeding uncontrolled opening of the mitochondrial transition pore. Supporting this view, inhibition of mitoBKCa with Iberiotoxin, enhances cytochrome c release from glioma mitochondria. Many tantalizing questions remain. Some of them are: how is mitoBKCa coupled to the respiratory chain? Does mitoBKCa play non-conduction roles in mitochondria physiology? Which are the functional partners of mitoBKCa? What are the roles of mitoBKCa in other cell types? Answers to these questions are essential to define the impact of mitoBKCa channel in mitochondria biology and disease.

  16. EFFECT OF CHANNEL BENDS ON TRANSVERSE MIXING

    African Journals Online (AJOL)

    user

    1986-09-01

    Sep 1, 1986 ... The first study of transverse mixing in bends of turbulent open channel flows ... Rozovskii's transverse velocity distribution for fully developed turbulent flow ... Yotsukura et al (3) employed a simulation procedure to predict the.

  17. ``Just Another Distribution Channel?''

    Science.gov (United States)

    Lemstra, Wolter; de Leeuw, Gerd-Jan; van de Kar, Els; Brand, Paul

    The telecommunications-centric business model of mobile operators is under attack due to technological convergence in the communication and content industries. This has resulted in a plethora of academic contributions on the design of new business models and service platform architectures. However, a discussion of the challenges that operators are facing in adopting these models is lacking. We assess these challenges by considering the mobile network as part of the value system of the content industry. We will argue that from the perspective of a content provider the mobile network is ‘just another’ distribution channel. Strategic options available for the mobile communication operators are to deliver an excellent distribution channel for content delivery or to move upwards in the value chain by becoming a content aggregator. To become a mobile content aggregator operators will have to develop or acquire complementary resources and capabilities. Whether this strategic option is sustainable remains open.

  18. The Novel KV7.2/KV7.3 Channel Opener ICA-069673 Reveals Subtype-Specific Functional Roles in Guinea Pig Detrusor Smooth Muscle Excitability and Contractility.

    Science.gov (United States)

    Provence, Aaron; Malysz, John; Petkov, Georgi V

    2015-09-01

    The physiologic roles of voltage-gated KV7 channel subtypes (KV7.1-KV7.5) in detrusor smooth muscle (DSM) are poorly understood. Here, we sought to elucidate the functional roles of KV7.2/KV7.3 channels in guinea pig DSM excitability and contractility using the novel KV7.2/KV7.3 channel activator ICA-069673 [N-(2-chloro-5-pyrimidinyl)-3,4-difluorobenzamide]. We employed a multilevel experimental approach using Western blot analysis, immunocytochemistry, isometric DSM tension recordings, fluorescence Ca(2+) imaging, and perforated whole-cell patch-clamp electrophysiology. Western blot experiments revealed the protein expression of KV7.2 and KV7.3 channel subunits in DSM tissue. In isolated DSM cells, immunocytochemistry with confocal microscopy further confirmed protein expression for KV7.2 and KV7.3 channel subunits, where they localize within the vicinity of the cell membrane. ICA-069673 inhibited spontaneous phasic, pharmacologically induced, and nerve-evoked contractions in DSM isolated strips in a concentration-dependent manner. The inhibitory effects of ICA-069673 on DSM spontaneous phasic and tonic contractions were abolished in the presence of the KV7 channel inhibitor XE991 [10,10-bis(4-pyridinylmethyl)-9(10H)-anthracenone dihydrochloride]. Under conditions of elevated extracellular K(+) (60 mM), the effects of ICA-069673 on DSM tonic contractions were significantly attenuated. ICA-069673 decreased the global intracellular Ca(2+) concentration in DSM cells, an effect blocked by the L-type Ca(2+) channel inhibitor nifedipine. ICA-069673 hyperpolarized the membrane potential and inhibited spontaneous action potentials of isolated DSM cells, effects that were blocked in the presence of XE991. In conclusion, using the novel KV7.2/KV7.3 channel activator ICA-069673, this study provides strong evidence for a critical role for the KV7.2- and KV7.3-containing channels in DSM function at both cellular and tissue levels.

  19. Modelling of gas-liquid, two-phase flow in porous media and channels of a PEM water electrolysis cell using the Euler-Euler framework of OpenFOAM

    DEFF Research Database (Denmark)

    Olesen, Anders Christian; Kær, Søren Knudsen

    was shown to push the limits of the codes ca-pabilities. In order to improve simulation stability and time, a new model is developed in the open source CFD software OpenFOAM. The customizability of this code not only allows for specific relaxation strategies, it also permits the implementation of various...

  20. Positron Channeling

    CERN Document Server

    Badikyan, Karen

    2016-01-01

    The possibility of channeling the low-energy relativistic positrons around separate crystallographic axes with coaxial symmetry of negative ions in some types of crystals is shown. The process of annihilation of positrons with electrons of medium was studied in detail.

  1. Brands & Channels

    Institute of Scientific and Technical Information of China (English)

    Alice Yang

    2009-01-01

    @@ "Brands" and "Channels" are the two most important things in Ku-Hai Chen's eyes when doing business with Main-land China. Ku-Hai Chen, Executive Director of the International Trade Institute of Taiwan External Trade Development Council (TAITRA), flies frequently between Chinese Taipei and Mainland China, and was in Beijing earlier this month for his seminar.

  2. 33 CFR 117.720 - Great Channel.

    Science.gov (United States)

    2010-07-01

    ... 33 Navigation and Navigable Waters 1 2010-07-01 2010-07-01 false Great Channel. 117.720 Section... DRAWBRIDGE OPERATION REGULATIONS Specific Requirements New Jersey § 117.720 Great Channel. The draw of the... every year, the draw need not open for vessels. If the fourth Sunday falls on a religious holiday,...

  3. Multi-Channel Retail Supply Chain Management: Fulfillment systems in Multi-Channel Retailing - Customer Expectations and Economic Performance

    OpenAIRE

    Lang, Gerald

    2010-01-01

    International audience; Increasingly, store-based retailers are opening an additional online sales channel and becoming multi-channel retailers. The integration of these different channels raises the question how to redefine the strategic marketing elements and the operations, as the two channels have different constraints and require different competences. This multi-channel retailing has major impacts on the operations and the supply-chain management. Order fulfillment for the customers usi...

  4. Channel Power in Multi-Channel Environments

    NARCIS (Netherlands)

    M.G. Dekimpe (Marnik); B. Skiera (Bernd)

    2004-01-01

    textabstractIn the literature, little attention has been paid to instances where companies add an Internet channel to their direct channel portfolio. However, actively managing multiple sales channels requires knowing the customers’ channel preferences and the resulting channel power. Two key compon

  5. Channel Power in Multi-Channel Environments

    NARCIS (Netherlands)

    M.G. Dekimpe (Marnik); B. Skiera (Bernd)

    2004-01-01

    textabstractIn the literature, little attention has been paid to instances where companies add an Internet channel to their direct channel portfolio. However, actively managing multiple sales channels requires knowing the customers’ channel preferences and the resulting channel power. Two key

  6. Open hardware for open science

    CERN Multimedia

    CERN Bulletin

    2011-01-01

    Inspired by the open source software movement, the Open Hardware Repository was created to enable hardware developers to share the results of their R&D activities. The recently published CERN Open Hardware Licence offers the legal framework to support this knowledge and technology exchange.   Two years ago, a group of electronics designers led by Javier Serrano, a CERN engineer, working in experimental physics laboratories created the Open Hardware Repository (OHR). This project was initiated in order to facilitate the exchange of hardware designs across the community in line with the ideals of “open science”. The main objectives include avoiding duplication of effort by sharing results across different teams that might be working on the same need. “For hardware developers, the advantages of open hardware are numerous. For example, it is a great learning tool for technologies some developers would not otherwise master, and it avoids unnecessary work if someone ha...

  7. Open Access

    Science.gov (United States)

    Suber, Peter

    2012-01-01

    The Internet lets us share perfect copies of our work with a worldwide audience at virtually no cost. We take advantage of this revolutionary opportunity when we make our work "open access": digital, online, free of charge, and free of most copyright and licensing restrictions. Open access is made possible by the Internet and copyright-holder…

  8. Open Access

    Science.gov (United States)

    Suber, Peter

    2012-01-01

    The Internet lets us share perfect copies of our work with a worldwide audience at virtually no cost. We take advantage of this revolutionary opportunity when we make our work "open access": digital, online, free of charge, and free of most copyright and licensing restrictions. Open access is made possible by the Internet and copyright-holder…

  9. Nonlinear channelizer

    Science.gov (United States)

    In, Visarath; Longhini, Patrick; Kho, Andy; Neff, Joseph D.; Leung, Daniel; Liu, Norman; Meadows, Brian K.; Gordon, Frank; Bulsara, Adi R.; Palacios, Antonio

    2012-12-01

    The nonlinear channelizer is an integrated circuit made up of large parallel arrays of analog nonlinear oscillators, which, collectively, serve as a broad-spectrum analyzer with the ability to receive complex signals containing multiple frequencies and instantaneously lock-on or respond to a received signal in a few oscillation cycles. The concept is based on the generation of internal oscillations in coupled nonlinear systems that do not normally oscillate in the absence of coupling. In particular, the system consists of unidirectionally coupled bistable nonlinear elements, where the frequency and other dynamical characteristics of the emergent oscillations depend on the system's internal parameters and the received signal. These properties and characteristics are being employed to develop a system capable of locking onto any arbitrary input radio frequency signal. The system is efficient by eliminating the need for high-speed, high-accuracy analog-to-digital converters, and compact by making use of nonlinear coupled systems to act as a channelizer (frequency binning and channeling), a low noise amplifier, and a frequency down-converter in a single step which, in turn, will reduce the size, weight, power, and cost of the entire communication system. This paper covers the theory, numerical simulations, and some engineering details that validate the concept at the frequency band of 1-4 GHz.

  10. Evaporation from open microchannel grooves.

    Science.gov (United States)

    Kachel, Sibylle; Zhou, Ying; Scharfer, Philip; Vrančić, Christian; Petrich, Wolfgang; Schabel, Wilhelm

    2014-02-21

    The evaporation of water from open u-shaped microchannel grooves was investigated with particular emphasis on the roles of channel width and air flow conditions. Given the small dimensions of the microchannels, all measurements were conducted in a range where convection and diffusion are of equal importance and known correlations for the calculation of mass transfer coefficients cannot be applied. The evaporation rates were measured using a new optical method and a gravimetric method. Both measurement methods yielded mass transfer coefficients that are in agreement with each other. The observed relation between mass transfer coefficient, air velocity and channel width vastly differs from the predictions obtained from macroscopic structures. With respect to diagnostic devices we conclude that analyte concentration in an open microchannel groove strongly increases even within short times due to the evaporation process and we show that wider channels are more favourable in terms of minimizing the relative evaporation rate.

  11. Open Source and Open Standards

    NARCIS (Netherlands)

    Koper, Rob

    2006-01-01

    Publication reference: Koper, R. (2008). Open Source and Open Standards. In J. M. Spector, M. Merrill, J. van Merriënboer & M. P. Driscol (Eds.), Handbook of Research on Educational Communications and Technology (3rd ed., pp. 355-368). New York: Routledge.

  12. Open IS

    DEFF Research Database (Denmark)

    Germonprez, Matt; Crowston, Kevin; Avital, Michel

    2013-01-01

    The collective intelligence and collective action of “open” communities have produced a variety of complex knowledge goods and radical social change. The Information Systems (IS) community has invested significant effort into researching open communities and the ecosystems in which they operate...... therefore seeks to stimulate a thoughtful and dynamic discussion around the proposition that becoming a more open community will enhance the IS discipline’s scholarly inquiry and global impact....

  13. Open IS

    DEFF Research Database (Denmark)

    Germonprez, Matt; Crowston, Kevin; Avital, Michel

    2013-01-01

    The collective intelligence and collective action of “open” communities have produced a variety of complex knowledge goods and radical social change. The Information Systems (IS) community has invested significant effort into researching open communities and the ecosystems in which they operate...... therefore seeks to stimulate a thoughtful and dynamic discussion around the proposition that becoming a more open community will enhance the IS discipline’s scholarly inquiry and global impact....

  14. Opening of small and intermediate calcium-activated potassium channels induces relaxation mainly mediated by nitric-oxide release in large arteries and endothelium-derived hyperpolarizing factor in small arteries from rat

    DEFF Research Database (Denmark)

    Stankevicius, Edgaras; Dalsgaard, Thomas; Kroigaard, Christel

    2011-01-01

    mesenteric arteries, NS309 relaxations and NO release were inhibited by both N(G),N(G)-asymmetric dimethyl-l-arginine (ADMA) (300 μM), an inhibitor of NO synthase, and apamin (0.5 μM) plus 1-[(2-chlorophenyl)diphenylmethyl]-1H-pyrazole (TRAM-34) (1 μM), blockers of SK(Ca) and IK(Ca) channels, respectively...

  15. The open-close mechanism of M2 channel protein in influenza A virus: A computational study on the hydrogen bonds and cation-π interactions among His37 and Trp41

    Institute of Scientific and Technical Information of China (English)

    CHENG JiaGao; ZHU WeiLiang; WANG YanLi; YAN XiuHua; LI Zhong; TANG Yun; JIANG HuaLiang

    2008-01-01

    The M2 protein from influenza A virus is a tetrameric ion channel. It was reported that the permeation of the ion channel is correlated with the hydrogen bond network among His37 residues and the cation-π interactions between His37 and Trp41. In the present study, the hydrogen bonding network of 4-methyl-imidazoles was built to mimic the hydrogen bonds between His37 residues, and the cation-π interactions between 4-methyl-imidazolium and indole systems were selected to represent the interac-tions between His37 and Trp41. Then, quantum chemistry calculations at the MP2/6-311G** level were carried out to explore the properties of the hydrogen bonds and the cation-π interactions. The calculation results indicate that the binding strength of the N--H…N hydrogen bond between imidazole rings is up to -6.22 kcal·mol-1, and the binding strength of the strongest cation-π interaction is up to -18.8 kcal·mol-1 (T-shaped interaction) or -12.3 kcal·mol-1 (parallel stacking interaction). Thus, the calculated binding energies indicate that it is possible to control the permeation of the M2 ion channel through the hydrogen bond network and the cation-π interactions by altering the pH values.

  16. The open-close mechanism of M2 channel protein in influenza A virus:A computational study on the hydrogen bonds and cation-π interactions among His37 and Trp41

    Institute of Scientific and Technical Information of China (English)

    2008-01-01

    The M2 protein from influenza A virus is a tetrameric ion channel. It was reported that the permeation of the ion channel is correlated with the hydrogen bond network among His37 residues and the cation-π interactions between His37 and Trp41. In the present study,the hydrogen bonding network of 4-methyl-imidazoles was built to mimic the hydrogen bonds between His37 residues,and the cation-π interactions between 4-methyl-imidazolium and indole systems were selected to represent the interac-tions between His37 and Trp41. Then,quantum chemistry calculations at the MP2/6-311G level were carried out to explore the properties of the hydrogen bonds and the cation-π interactions. The calcula-tion results indicate that the binding strength of the N-H···N hydrogen bond between imidazole rings is up to -6.22 kcal·mol-1,and the binding strength of the strongest cation-π interaction is up to -18.8 kcal·mol-1(T-shaped interaction) or -12.3 kcal·mol-1(parallel stacking interaction). Thus,the calcu-lated binding energies indicate that it is possible to control the permeation of the M2 ion channel through the hydrogen bond network and the cation-π interactions by altering the pH values.

  17. Dynamical memory effects in correlated quantum channels

    Science.gov (United States)

    Addis, Carole; Karpat, Göktuǧ; Macchiavello, Chiara; Maniscalco, Sabrina

    2016-09-01

    Memory effects play a fundamental role in the study of the dynamics of open quantum systems. There exist two conceptually distinct notions of memory discussed for quantum channels in the literature. In quantum information theory quantum channels with memory are characterized by the existence of correlations between successive applications of the channel on a sequence of quantum systems. In open quantum systems theory memory effects arise dynamically during the time evolution of quantum systems and define non-Markovian dynamics. Here we relate and combine these two different concepts of memory. In particular, we study the interplay between correlations between multiple uses of quantum channels and non-Markovianity as nondivisibility of the t -parametrized family of channels defining the dynamical map.

  18. Channel protein engineering: Synthetic 22-mer peptide from the primary structure of the voltage-sensitive sodium channel forms ionic channels in lipid bilayers

    OpenAIRE

    1988-01-01

    A synthetic 22-mer peptide that mimics the sequence of a putative pore segment of the voltage-dependent sodium channel forms transmembrane ionic channels in lipid bilayers. Several features of the authentic sodium channel are exhibited by the synthetic peptide: (i) The single channel conductance of the most frequent event is 20 pS in 0.5 M NaCl. (ii) The single channel open and closed lifetimes are in the ms time range. (iii) The synthetic channel discriminates cations over anions but is nons...

  19. Anion-Channel Blockers Inhibit S-Type Anion Channels and Abscisic Acid Responses in Guard Cells.

    Science.gov (United States)

    Schwartz, A.; Ilan, N.; Schwarz, M.; Scheaffer, J.; Assmann, S. M.; Schroeder, J. I.

    1995-10-01

    The effects of anion-channel blockers on light-mediated stomatal opening, on the potassium dependence of stomatal opening, on stomatal responses to abscisic acid (ABA), and on current through slow anion channels in the plasma membrane of guard cells were investigated. The anion-channel blockers anthracene-9-carboxylic acid (9-AC) and niflumic acid blocked current through slow anion channels of Vicia faba L. guard cells. Both 9-AC and niflumic acid reversed ABA inhibition of stomatal opening in V. faba L. and Commelina communis L. The anion-channel blocker probenecid also abolished ABA inhibition of stomatal opening in both species. Additional tests of 9-AC effects on stomatal aperture in Commelina revealed that application of this anion-channel blocker allowed wide stomatal opening under low (1 mM) KCI conditions and increased the rate of stomatal opening under both low and high (100 mM) KCI conditions. These results indicate that anion channels can function as a negative regulator of stomatal opening, presumably by allowing anion efflux and depolarization, which prohibits ion up-take in guard cells. Furthermore, 9-AC prevented ABA induction of stomatal closure. A model in which ABA activation of anion channels contributes a rate-limiting mechanism during ABA-induced stomatal closure and inhibition of stomatal opening is discussed.

  20. Open access

    CERN Document Server

    Suber, Peter

    2012-01-01

    The Internet lets us share perfect copies of our work with a worldwide audience at virtually no cost. We take advantage of this revolutionary opportunity when we make our work "open access": digital, online, free of charge, and free of most copyright and licensing restrictions. Open access is made possible by the Internet and copyright-holder consent, and many authors, musicians, filmmakers, and other creators who depend on royalties are understandably unwilling to give their consent. But for 350 years, scholars have written peer-reviewed journal articles for impact, not for money, and are free to consent to open access without losing revenue. In this concise introduction, Peter Suber tells us what open access is and isn't, how it benefits authors and readers of research, how we pay for it, how it avoids copyright problems, how it has moved from the periphery to the mainstream, and what its future may hold. Distilling a decade of Suber's influential writing and thinking about open access, this is the indispe...

  1. Open Brief

    Directory of Open Access Journals (Sweden)

    Andrew Leach

    2013-11-01

    Full Text Available To commence the thirtieth annual conference of the Society of Architectural Historians, Australia and New Zealand (SAHANZ, held on Australia’s Gold Coast in July 2013, ten delegates were invited with very little warning to take five minutes and one image to offer a provocation on the open matters of architectural history in the present moment. The term “open” was taken as the conference theme—a device used by SAHANZ meetings not so much to define the scope of papers presented as to declare the conference flavour year by year. It was not, therefore, an open conference (anything goes so much as a conference on open issues (where, indeed, to go.  The ten interlocutors were invited after the conference to document their interventions and they are presented here as a record of the preoccupations of a specific moment and institutional geography with all the idiosyncrasies and commonalities it might reveal to a broader audience.

  2. Open Education and the Open Science Economy

    Science.gov (United States)

    Peters, Michael A.

    2009-01-01

    Openness as a complex code word for a variety of digital trends and movements has emerged as an alternative mode of "social production" based on the growing and overlapping complexities of open source, open access, open archiving, open publishing, and open science. This paper argues that the openness movement with its reinforcing structure of…

  3. Marine Toxins Targeting Ion Channels

    Directory of Open Access Journals (Sweden)

    Hugo R. Arias

    2006-04-01

    Full Text Available Abstract: This introductory minireview points out the importance of ion channels for cell communication. The basic concepts on the structure and function of ion channels triggered by membrane voltage changes, the so-called voltage-gated ion channels (VGICs, as well as those activated by neurotransmitters, the so-called ligand-gated ion channel (LGICs, are introduced. Among the most important VGIC superfamiles, we can name the voltage-gated Na+ (NaV, Ca2+ (CaV, and K+ (KV channels. Among the most important LGIC super families, we can include the Cys-loop or nicotinicoid, the glutamate-activated (GluR, and the ATP-activated (P2XnR receptor superfamilies. Ion channels are transmembrane proteins that allow the passage of different ions in a specific or unspecific manner. For instance, the activation of NaV, CaV, or KV channels opens a pore that is specific for Na+, Ca2+, or K+, respectively. On the other hand, the activation of certain LGICs such as nicotinic acetylcholine receptors, GluRs, and P2XnRs allows the passage of cations (e.g., Na+, K+, and/or Ca2+, whereas the activation of other LGICs such as type A γ-butyric acid and glycine receptors allows the passage of anions (e.g., Cl− and/or HCO3−. In this regard, the activation of NaV and CaV as well as ligand-gated cation channels produce membrane depolarization, which finally leads to stimulatory effects in the cell, whereas the activation of KV as well as ligand-gated anion channels induce membrane hyperpolarization that finally leads to inhibitory effects in the cell. The importance of these ion channel superfamilies is emphasized by considering their physiological functions throughout the body as well as their pathophysiological implicance in several neuronal diseases. In this regard, natural molecules, and especially marine toxins, can be potentially used as modulators (e.g., inhibitors or prolongers of ion channel functions to treat or to alleviate a specific

  4. Pore size matters for potassium channel conductance

    Science.gov (United States)

    Moldenhauer, Hans; Pincuntureo, Matías

    2016-01-01

    Ion channels are membrane proteins that mediate efficient ion transport across the hydrophobic core of cell membranes, an unlikely process in their absence. K+ channels discriminate K+ over cations with similar radii with extraordinary selectivity and display a wide diversity of ion transport rates, covering differences of two orders of magnitude in unitary conductance. The pore domains of large- and small-conductance K+ channels share a general architectural design comprising a conserved narrow selectivity filter, which forms intimate interactions with permeant ions, flanked by two wider vestibules toward the internal and external openings. In large-conductance K+ channels, the inner vestibule is wide, whereas in small-conductance channels it is narrow. Here we raise the idea that the physical dimensions of the hydrophobic internal vestibule limit ion transport in K+ channels, accounting for their diversity in unitary conductance. PMID:27619418

  5. The Open

    Directory of Open Access Journals (Sweden)

    Saitya Brata Das

    2009-12-01

    Full Text Available In the Open darkness and light, remembrance and oblivion, coming into existence and disappearing in death play their originary co-belonging, or co-figuration. Existence belongs to this opening and is exposed to its coming to presence: it is on the basis of this originary opening, this originary historical which is revealed to this mortal being called ‘man,’ on the basis of this revelation, man founds something like politics and history. There thus comes into existence out of this freedom, out of this “play space”2, this field called ‘polis’3 where there takes place war and festival, where historical revolutions tear apart history, brings ruptures and discontinuities in the very mode of his existence, where man seeks the foundation of his own foundation (which is his metaphysical task , where occurs the dialectics of negativity between man and man, where man puts at stake his own death, his own dissolution, and by the power of his own dissolution stands in relation to the total world that he seeks to dominate. This means that man’s attempts to metaphysically found his own political and historical existence must presuppose a far more originary non-foundation, the differentiating revealing of the open, the ungrounded spacing play, or playing space of natality and mortality.

  6. Open innovation

    DEFF Research Database (Denmark)

    West, Joel; Bogers, Marcel

    2017-01-01

    by small, new, and not-for-profit organizations, as well as the linkage of individual actions and motivations to open innovation. Other opportunities include better measuring the costs, benefits, antecedents, mediators and moderators of the effects of OI on performance, and understanding why and how OI...

  7. Boiling Heat Transfer on Porous Surfaces with Vapor Channels

    Institute of Scientific and Technical Information of China (English)

    吴伟; 杜建华; 王补宣

    2002-01-01

    Boiling heat transfer on porous coated surfaces with vapor channels was investigated experimentally to determine the effects of the size and density of the vapor channels on the boiling heat transfer. Observations showed that bubbles escaping from the channels enhanced the heat transfer. Three regimes were identified: liquid flooding, bubbles in the channel and the bottom drying out region. The maximum heat transfer occurred for an optimum vapor channel density and the boiling heat transfer performance was increased if the channels were open to the bottom of the porous coating.

  8. Open Source, Open Access, Open Review, Open Data. Initiativen zu mehr Offenheit in der digitalen Welt

    OpenAIRE

    Herb, Ulrich

    2011-01-01

    The article discusses the principles of openess, open access and open availability of information based on the examples of open access to scientific information, open government data, open geographical data and open source software.

  9. Open Source, Open Access, Open Review, Open Data. Initiativen zu mehr Offenheit in der digitalen Welt

    OpenAIRE

    Herb, Ulrich

    2011-01-01

    The article discusses the principles of openess, open access and open availability of information based on the examples of open access to scientific information, open government data, open geographical data and open source software.

  10. An open-label, randomized, controlled, 4-week comparative clinical trial of barnidipine hydrochloride, a calcium-channel blocker, and benazepril, an angiotensin-converting enzyme inhibitor, in Chinese patients with renal parenchymal hypertension.

    Science.gov (United States)

    Chen, X; Zheng, F; Chen, P; Tang, L; Wei, R; Yu, Y; Su, Y; Kikkawa, T; Yamamoto, M

    2006-01-01

    This study compared barnidipine, a calcium-channel blocker, and benazepril, an angiotensin-converting enzyme inhibitor, in 85 Chinese patients with renal parenchymal hypertension (diastolic blood pressure range 95 - 110 mmHg). Patients were randomly assigned to receive either 10 mg barnidipine or 10 mg benazepril orally daily for 4 weeks. In patients with diastolic blood pressure > 90 mmHg after 2 weeks of treatment, the dose of barnidipine or benazepril was increased by 5 or 10 mg, respectively. Both the barnidipine-treated group (n = 43) and the benazepril-treated group (n = 42) showed significant mean reductions from baseline in sitting systolic and diastolic blood pressures. The decrease in diastolic blood pressure with benazepril was significantly greater than with barnidipine treatment. Sitting heart rate was not changed by either drug. There was no significant difference in adverse events between the two groups. Barnidipine is similar to benazepril for the treatment of renal parenchymal hypertension.

  11. Plectasin, First Animal Toxin-Like Fungal Defensin Blocking Potassium Channels through Recognizing Channel Pore Region

    Directory of Open Access Journals (Sweden)

    Fang Xiang

    2015-01-01

    Full Text Available The potassium channels were recently found to be inhibited by animal toxin-like human β-defensin 2 (hBD2, the first defensin blocker of potassium channels. Whether there are other defensin blockers from different organisms remains an open question. Here, we reported the potassium channel-blocking plectasin, the first defensin blocker from a fungus. Based on the similar cysteine-stabilized alpha-beta (CSαβ structure between plectasin and scorpion toxins acting on potassium channels, we found that plectasin could dose-dependently block Kv1.3 channel currents through electrophysiological experiments. Besides Kv1.3 channel, plectasin could less inhibit Kv1.1, Kv1.2, IKCa, SKCa3, hERG and KCNQ channels at the concentration of 1 μΜ. Using mutagenesis and channel activation experiments, we found that outer pore region of Kv1.3 channel was the binding site of plectasin, which is similar to the interacting site of Kv1.3 channel recognized by animal toxin blockers. Together, these findings not only highlight the novel function of plectasin as a potassium channel inhibitor, but also imply that defensins from different organisms functionally evolve to be a novel kind of potassium channel inhibitors.

  12. OpenAPC. Open-Access-Publikationskosten als Open Data

    OpenAIRE

    Tullney, Marco

    2015-01-01

    Präsentationsfolien zum Vortrag „OpenAPC. Open-Access-Publikationskosten als Open Data“ in der Session „Ausgestaltung eines wissenschaftsadäquaten APC-Marktes: Grundsätze, Finanzierungsansätze und Management“ der Open-Access-Tage 2015 in Zürich (https://www.open-access.net/community/open-access-tage/open-access-tage-2015-zuerich/programm/#c1974)

  13. Flavonoid Regulation of HCN2 Channels*

    Science.gov (United States)

    Carlson, Anne E.; Rosenbaum, Joel C.; Brelidze, Tinatin I.; Klevit, Rachel E.; Zagotta, William N.

    2013-01-01

    The hyperpolarization-activated cyclic nucleotide-modulated (HCN) channels are pacemaker channels whose currents contribute to rhythmic activity in the heart and brain. HCN channels open in response to hyperpolarizing voltages, and the binding of cAMP to their cyclic nucleotide-binding domain (CNBD) facilitates channel opening. Here, we report that, like cAMP, the flavonoid fisetin potentiates HCN2 channel gating. Fisetin sped HCN2 activation and shifted the conductance-voltage relationship to more depolarizing potentials with a half-maximal effective concentration (EC50) of 1.8 μm. When applied together, fisetin and cAMP regulated HCN2 gating in a nonadditive fashion. Fisetin did not potentiate HCN2 channels lacking their CNBD, and two independent fluorescence-based binding assays reported that fisetin bound to the purified CNBD. These data suggest that the CNBD mediates the fisetin potentiation of HCN2 channels. Moreover, binding assays suggest that fisetin and cAMP partially compete for binding to the CNBD. NMR experiments demonstrated that fisetin binds within the cAMP-binding pocket, interacting with some of the same residues as cAMP. Together, these data indicate that fisetin is a partial agonist for HCN2 channels. PMID:24085296

  14. Charges in the cytoplasmic pore control intrinsic inward rectification and single-channel properties in Kir1.1 and Kir2.1 channels.

    Science.gov (United States)

    Chang, Hsueh-Kai; Yeh, Shih-Hao; Shieh, Ru-Chi

    2007-02-01

    An E224G mutation of the Kir2.1 channel generates intrinsic inward rectification and single-channel fluctuations in the absence of intracellular blockers. In this study, we showed that positively charged residues H226, R228 and R260, near site 224, regulated the intrinsic inward rectification and single-channel properties of the E224G mutant. By carrying out systematic mutations, we found that the charge effect on the intrinsic inward rectification and single-channel conductance is consistent with a long-range electrostatic mechanism. A Kir1.1 channel where the site equivalent to E224 in the Kir2.1 channel is a glycine residue does not show inward rectification or single-channel fluctuations. The G223K and N259R mutations of the Kir1.1 channel induced intrinsic inward rectification and reduced the single-channel conductance but did not generate large open-channel fluctuations. Substituting the cytoplasmic pore of the E224G mutant into the Kir1.1 channel induced open-channel fluctuations and intrinsic inward rectification. The single-channel conductance of the E224G mutant showed inward rectification. Also, a voltage-dependent gating mechanism decreased open probability during depolarization and contributed to the intrinsic inward rectification in the E224G mutant. In addition to an electrostatic effect, a close interaction of K(+) with channel pore may be required for generating open-channel fluctuations in the E224G mutant.

  15. The small molecule NS11021 is a potent and specific activator of Ca2+-activated big-conductance K+ channels

    DEFF Research Database (Denmark)

    Bentzen, Bo Hjorth; Nardi, Antonio; Calloe, Kirstine

    2007-01-01

    -channel analysis revealed that NS11021 increased the open probability of the channel by altering gating kinetics without affecting the single-channel conductance. NS11021 (10 microM) influenced neither a number of cloned Kv channels nor endogenous Na(+) and Ca(2+) channels (L- and T-type) in guinea pig cardiac...

  16. Endogenous chloride channels of insect sf9 cells. Evidence for coordinated activity of small elementary channel units

    DEFF Research Database (Denmark)

    Larsen, Erik Hviid; Gabriel, S. E.; Stutts, M. J.

    1996-01-01

    ) openings interrupted by similar long closures. In the open state, channels exhibited fast burst-like closures. Since the patches normally contained more than a single channel, it was not possible to measure open and closed dwell-time distributions for comparing single-Cl- channel activity with the kinetic....../150) of approximately 3.5 pS and approximately 35 pS, respectively. All states reversed near the same membrane potential, and they exhibited similar halide ion selectivity, P1 > PCl approximately PBr. Accordingly, Cl- current amplitudes larger than current flow through the smallest channel unit resolved seem to result...... from simultaneous open/shut events of two or more channel units....

  17. Dividing Streamline Formation Channel Confluences by Physical Modeling

    Directory of Open Access Journals (Sweden)

    Minarni Nur Trilita

    2010-02-01

    Full Text Available Confluence channels are often found in open channel network system and is the most important element. The incoming flow from the branch channel to the main cause various forms and cause vortex flow. Phenomenon can cause erosion of the side wall of the channel, the bed channel scour and sedimentation in the downstream confluence channel. To control these problems needed research into the current width of the branch channel. The incoming flow from the branch channel to the main channel flow bounded by a line distributors (dividing streamline. In this paper, the wide dividing streamline observed in the laboratory using a physical model of two open channels, a square that formed an angle of 30º. Observations were made with a variety of flow coming from each channel. The results obtained in the laboratory observation that the width of dividing streamline flow is influenced by the discharge ratio between the channel branch with the main channel. While the results of a comparison with previous studies showing that the observation in the laboratory is smaller than the results of previous research.

  18. Open Images

    DEFF Research Database (Denmark)

    Sanderhoff, Merete

    2013-01-01

    Museums around the world hold enormous troves of public domain artworks. In digitized form, they can be powerful tools for research and learning, as well as building blocks, in the hands of students, teachers, scholars, developers, and creative people. By opening up their digitized assets for reuse......, museums have a unique opportunity to broaden the scope of their public mission to serve and educate the public on 21st century media terms. What could be controversial about that? Art museums have a long legacy of restricting access to high quality images of artworks in order to protect them from improper...

  19. Open University

    CERN Document Server

    Pentz,M

    1975-01-01

    Michel Pentz est née en Afrique du Sud et venu au Cern en 1957 comme physicien et président de l'associaion du personnel. Il est également fondateur du mouvement Antiapartheid de Genève et a participé à la fondation de l'Open University en Grande-Bretagne. Il nous parle des contextes pédagogiques, culturels et nationaux dans lesquels la méthode peut s'appliquer.

  20. Noise analysis of ionization kinetics in a protein ion channel

    Science.gov (United States)

    Bezrukov, Sergey M.; Kasianowicz, John J.

    1993-08-01

    We observed excess current noise generated by the reversible ionization of sites in a transmembrane protein ion channel, which is analogous to current fluctuations found recently in solid state microstructure electronic devices. Specifically the current through fully open single channels formed by Staphylococcus aureus α-toxin shows pH dependent fluctuations. We show that noise analysis of the open channel current can be used to evaluate the ionization rate constants, the number of sites participating in the ionization process, and the effect of recharging a single site on the channel conductance.

  1. Description of interacting channel gating using a stochastic Markovian model.

    Science.gov (United States)

    Manivannan, K; Mathias, R T; Gudowska-Nowak, E

    1996-01-01

    Single-channel recordings from membrane patches frequently exhibit multiple conductance levels. In some preparations, the steady-state probabilities of observing these levels do not follow a binomial distribution. This behavior has been reported in sodium channels, potassium channels, acetylcholine receptor channels and gap junction channels. A non-binomial distribution suggests interaction of the channels or the presence of channels or the presence of channels with different open probabilities. However, the current trace sometimes exhibits single transitions spanning several levels. Since the probability of simultaneous transitions of independent channels is infinitesimally small, such observations strongly suggest a cooperative gating behavior. We present a Markov model to describe the cooperative gating of channels using only the all-points current amplitude histograms for the probability of observing the various conductance levels. We investigate the steady-state (or equilibrium) properties of a system of N channels and provide a scheme to express all the probabilities in terms of just two parameters. The main feature of our model is that lateral interaction of channels gives rise to cooperative gating. Another useful feature is the introduction of the language of graph theory which can potentially provide a different avenue to study ion channel kinetics. We write down explicit expressions for systems of two, three and four channels and provide a procedure to describe the system of N channels.

  2. Electrophysiological characterisation of KCNQ channel modulators

    DEFF Research Database (Denmark)

    Schrøder, R.L

    -cell configuration by the patch-clamp technique. Voltage-activated KCNQ currents were enhanced by extracellular application of retigabine, and also by the novel BK channel opener Compound 1 (( )-(5-chloro-2-metoxyphenyl)-1.3-didydroxy-3-fluoro-6-(trifluoromethyl)-2H-indol-2-one) (Gribkoff et al. 2001). The effects......, was sensitive to linopirdine and XE991, and had a nearly linear I-V relationship. Moreover, development of the voltage-independent current did not require a preceding voltage-dependent activation of the channel. This effect of Compound 1 may have profound hyperpolarising actions on cells expressing the KCNQ4......Potassium (K+) ion channels are ubiquitously expressed in mammalian cells, and each channel serves a precise physiological role due to its specific biophysical characteristics and expression pattern. A few K+ channels are targets for certain drugs, and in this thesis it is suggested that the KCNQ K...

  3. A New Baroreceptor Sensitivity-Restoring Ca-Channel Blocker Diminishes Age-Related Morning Blood Pressure Increase in Hypertensive Patients: Open-Label Monitoring of Azelnidipine Treatment for Hypertension in the Early Morning (At-HOME Study

    Directory of Open Access Journals (Sweden)

    Mitsunori Sugiyama

    2010-01-01

    Full Text Available Background: Morning blood pressure (BP surge, which exhibits an age-related increase, is a risk factor for stroke in elderly hypertensive patients, independently of the 24-h BP level. We studied the effect of the new baroreceptor sensitivity (BRS-restoring Ca-channel blocker (CCB azelnidipine (AZ on this age-related morning BP increase. Methods: We conducted a 16-week prospective study to clarify the effect of morning dosing of AZ on home BPs measured in the morning and in the evening in 2,546 hypertensive patients (mean age, 65.1 years; female, 53.6%. Results: At baseline, ME-Dif (morning systolic BP [SBP]–evening SBP increased with age, independently of ME-Ave (average of the morning and evening SBPs. This age-related increase of ME-Dif was exaggerated by regular alcohol drinking and beta-blocker use. After AZ treatment (14.3 ± 3.6 mg/day, ME-AV and ME-Dif were significantly reduced independently of each other, with reductions of –18.1 ± 15.6 and –2.5 ± 13.2 mmHg, respectively (both p < 0.001. AZ treatment decreased age-related increase in ME-Dif particularly in patients who were regular consumers of alcohol and in beta-blocker users. Conclusions: The new BRS-restoring CCB AZ significantly reduced age-related increase in morning BP and had some potential benefit on cardiovascular protection in hypertension, particularly in elderly patients and/or consumers of alcohol.

  4. Epilepsy-Related Slack Channel Mutants Lead to Channel Over-Activity by Two Different Mechanisms

    Directory of Open Access Journals (Sweden)

    Qiong-Yao Tang

    2016-01-01

    Full Text Available Twelve sodium-activated potassium channel (KCNT1, Slack genetic mutants have been identified from severe early-onset epilepsy patients. The changes in biophysical properties of these mutants and the underlying mechanisms causing disease remain elusive. Here, we report that seven of the 12 mutations increase, whereas one mutation decreases, the channel’s sodium sensitivity. Two of the mutants exhibit channel over-activity only when the intracellular Na+ ([Na+]i concentration is ∼80 mM. In contrast, single-channel data reveal that all 12 mutants increase the maximal open probability (Po. We conclude that these mutant channels lead to channel over-activity predominantly by increasing the ability of sodium binding to activate the channel, which is indicated by its maximal Po. The sodium sensitivity of these epilepsy causing mutants probably determines the [Na+]i concentration at which these mutants exert their pathological effects.

  5. Effect of Potassium Channel Modulators on Morphine Withdrawal in Mice

    Directory of Open Access Journals (Sweden)

    Vikas Seth

    2010-01-01

    Full Text Available The present study was conducted to investigate the effect of potassium channel openers and blockers on morphine withdrawal syndrome. Mice were rendered dependent on morphine by subcutaneous injection of morphine; four hours later, withdrawal was induced by using an opioid antagonist, naloxone. Mice were observed for 30 minutes for the withdrawal signs ie, the characteristic jumping, hyperactivity, urination and diarrhea. ATP-dependent potassium (K + ATP channel modulators were injected intraperitoneally (i.p. 30 minutes before the naloxone. It was found that a K + ATP channel opener, minoxidil (12.5–50 mg/kg i.p., suppressed the morphine withdrawal significantly. On the other hand, the K + ATP channel blocker glibenclamide (12.5–50 mg/kg i.p. caused a significant facilitation of the withdrawal. Glibenclamide was also found to abolish the minoxidil's inhibitory effect on morphine withdrawal. The study concludes that K + ATP channels play an important role in the genesis of morphine withdrawal and K + ATP channel openers could be useful in the management of opioid withdrawal. As morphine opens K + ATP channels in neurons, the channel openers possibly act by mimicking the effects of morphine on neuronal K + currents.

  6. Interaction of hydrogen sulfide with ion channels.

    Science.gov (United States)

    Tang, Guanghua; Wu, Lingyun; Wang, Rui

    2010-07-01

    1. Hydrogen sulfide (H(2)S) is a signalling gasotransmitter. It targets different ion channels and receptors, and fulfils its various roles in modulating the functions of different systems. However, the interaction of H(2)S with different types of ion channels and underlying molecular mechanisms has not been reviewed systematically. 2. H(2)S is the first identified endogenous gaseous opener of ATP-sensitive K(+) channels in vascular smooth muscle cells. Through the activation of ATP-sensitive K(+) channels, H(2)S lowers blood pressure, protects the heart from ischemia and reperfusion injury, inhibits insulin secretion in pancreatic beta cells, and exerts anti-inflammatory, anti-nociceptive and anti-apoptotic effects. 3. H(2)S inhibited L-type Ca(2+) channels in cardiomyocytes but stimulated the same channels in neurons, thus regulating intracellular Ca(2+) levels. H(2)S activated small and medium conductance K(Ca) channels but its effect on BK(Ca) channels has not been consistent. 4. H(2)S-induced hyperalgesia and pro-nociception seems to be related to the sensitization of both T-type Ca(2+) channels and TRPV(1) channels. The activation of TRPV(1) and TRPA(1) by H(2)S is believed to result in contraction of nonvascular smooth muscles and increased colonic mucosal Cl(-) secretion. 5. The activation of Cl(-) channel by H(2)S has been shown as a protective mechanism for neurons from oxytosis. H(2)S also potentiates N-methyl-d-aspartic acid receptor-mediated currents that are involved in regulating synaptic plasticity for learning and memory. 6. Given the important modulatory effects of H(2)S on different ion channels, many cellular functions and disease conditions related to homeostatic control of ion fluxes across cell membrane should be re-evaluated.

  7. Mobile radio channels

    CERN Document Server

    Pätzold, Matthias

    2011-01-01

    Providing a comprehensive overview of the modelling, analysis and simulation of mobile radio channels, this book gives a detailed understanding of fundamental issues and examines state-of-the-art techniques in mobile radio channel modelling. It analyses several mobile fading channels, including terrestrial and satellite flat-fading channels, various types of wideband channels and advanced MIMO channels, providing a fundamental understanding of the issues currently being investigated in the field. Important classes of narrowband, wideband, and space-time wireless channels are explored in deta

  8. OpenER, a Dutch Initiative in Open Educational Resources

    Science.gov (United States)

    Schuwer, Robert; Mulder, Fred

    2009-01-01

    Over the period 2006-2008, the Dutch Open Universiteit Nederland conducted an experiment in which Open Educational Resources (OER) were offered in an effort to bridge the gap between informal and formal learning and to establish a new style of entry portal to higher education with no barriers at all. OpenER received considerable attention both in…

  9. Glucose- and interleukin-1beta-induced beta-cell apoptosis requires Ca2+ influx and extracellular signal-regulated kinase (ERK) 1/2 activation and is prevented by a sulfonylurea receptor 1/inwardly rectifying K+ channel 6.2 (SUR/Kir6.2) selective potassium channel opener in human islets

    DEFF Research Database (Denmark)

    Maedler, Kathrin; Størling, Joachim; Sturis, Jeppe

    2004-01-01

    Increasing evidence indicates that a progressive decrease in the functional beta-cell mass is the hallmark of both type 1 and type 2 diabetes. The underlying causes, beta-cell apoptosis and impaired secretory function, seem to be partly mediated by macrophage production of interleukin (IL)-1beta......-regulated kinase (ERK) 1/2, an effect that was abrogated by 3 micromol/l NN414. Similarly, 1 micromol/l of the mitogen-activated protein kinase/ERK kinase 1/2 inhibitor PD098059 or 1 micromol/l of the l-type Ca(2+) channel blocker nimodipine prevented glucose- and IL-1beta-induced ERK activation, beta...

  10. Channel nut tool

    Energy Technology Data Exchange (ETDEWEB)

    Olson, Marvin

    2016-01-12

    A method, system, and apparatus for installing channel nuts includes a shank, a handle formed on a first end of a shank, and an end piece with a threaded shaft configured to receive a channel nut formed on the second end of the shaft. The tool can be used to insert or remove a channel nut in a channel framing system and then removed from the channel nut.

  11. PERFORMANCES OF ADAPTIVE MODULATION AND CODING IN SATELLITE MOBILE CHANNEL

    Institute of Scientific and Technical Information of China (English)

    Yu Fangyuan; Yang Mingchuan; Guo Qing

    2011-01-01

    Given that satellite mobile channel is a time-varying channel,Adaptive Modulation and Coding (AMC) was proposed to provide robust and spectrally efficient transmission over satellite mobile channel.Three different kinds of channel environment were considered in this paper:the urban area,the rural area,and the open space.Four combinations of modulation and coding were designed to meet reliable communication on time-varying channel,and spectral efficiency and system throughput of these three kinds of channel environment were simulated.Based on the simulation results,this paper analysed the results and compared the performances of AMC with non-AMC system in these three kinds of channel environment.At last,we come to the conclusions:a system with AMC can achieve higher spectral efficiency and better system throughput; and the spectral efficiency and system throughput of AMC system will be higher on better satellite mobile channel.

  12. Openness initiative

    Energy Technology Data Exchange (ETDEWEB)

    Duncan, S.S. [Los Alamos National Lab., NM (United States)

    1995-12-31

    Although antinuclear campaigns seem to be effective, public communication and education efforts on low-level radioactive waste have mixed results. Attempts at public information programs on low-level radioactive waste still focus on influencing public opinion. A question then is: {open_quotes}Is it preferable to have a program focus on public education that will empower individuals to make informed decisions rather than trying to influence them in their decisions?{close_quotes} To address this question, a case study with both quantitative and qualitative data will be used. The Ohio Low-Level Radioactive Waste Education Program has a goal to provide people with information they want/need to make their own decisions. The program initiated its efforts by conducting a statewide survey to determine information needed by people and where they turned for that information. This presentation reports data from the survey and then explores the program development process in which programs were designed and presented using the information. Pre and post data from the programs reveal attitude and knowledge shifts.

  13. Gallbladder removal - open

    Science.gov (United States)

    Cholecystectomy - open; Surgery - gallbladder - open ... a medical instrument called a laparoscope ( laparoscopic cholecystectomy ). Open gallbladder surgery is used when laparoscopic surgery cannot ...

  14. Functional architecture of the CFTR chloride channel.

    Science.gov (United States)

    Linsdell, Paul

    2014-02-01

    Cystic fibrosis is caused by mutations in the cystic fibrosis transmembrane conductance regulator (CFTR), a member of the ATP-binding cassette (ABC) family of membrane transport proteins. CFTR is unique among ABC proteins in that it functions not as an active transporter but as an ATP-gated Cl(-) channel. As an ion channel, the function of the CFTR transmembrane channel pore that mediates Cl(-) movement has been studied in great detail. On the other hand, only low resolution structural data is available on the transmembrane parts of the protein. The structure of the channel pore has, however, been modeled on the known structure of active transporter ABC proteins. Currently, significant barriers exist to building a unified view of CFTR pore structure and function. Reconciling functional data on the channel with indirect structural data based on other proteins with very different transport functions and substrates has proven problematic. This review summarizes current structural and functional models of the CFTR Cl(-) channel pore, including a comprehensive review of previous electrophysiological investigations of channel structure and function. In addition, functional data on the three-dimensional arrangement of pore-lining helices, as well as contemporary hypotheses concerning conformational changes in the pore that occur during channel opening and closing, are discussed. Important similarities and differences between different models of the pore highlight current gaps in our knowledge of CFTR structure and function. In order to fill these gaps, structural and functional models of the membrane-spanning pore need to become better integrated.

  15. Opening Address

    Science.gov (United States)

    Crovini, L.

    1994-01-01

    Ladies and Gentlemen To quote Mr Jean Terrien: "Physics must be one step ahead of metrology". A long-serving Director of the BIPM, he said these words when visiting the IMGC in 1970 as a member of the scientific board of our Institute. At that time it was still an open question whether the IMGC should start research work on the absolute measurement of silicon lattice spacing. Mr Terrien underlined the revolutionary character of x-ray interferometry and, eventually, he caused the balance needle to lean towards the ... right direction. Mr Terrien correctly foresaw that, like Michelson's interferometer of 1880, x-ray interferometry could have a prominent place in today's science and technology. And while, in the first case, after more than a century we can see instruments based on electromagnetic wave interaction within every one's reach in laboratories and, sometimes, in workshops, in the second case, twenty-five years since the first development of an x-ray interferometer we can witness its role in nanometrology. Today and tomorrow we meet to discuss how to go beyond the sixth decimal place in the value of the Avogadro constant. We are aware that the quest for this achievement requires the cooperation of scientists with complementary capabilities. I am sure that the present workshop is a very good opportunity to present and discuss results and to improve and extend existing cooperation. The new adjustment of fundamental constants envisaged by the CODATA Task Group is redoubling scientists' efforts to produce competitive values of NA. The results of the measurements of the silicon lattice spacing in terms of an optical wavelength, which were available for the 1986 adjustment, combined with the determination of silicon molar volume, demonstrate how such an NA determination produces a consistent set of other constants and opens the way to a possible redefinition of the kilogram. We shall see in these two days how far we have progressed along this road. For us at the

  16. DEET toxicity to channel catfish sac fry

    Science.gov (United States)

    The combination of open facilities, moisture, and warm weather during channel catfish Ictalurus punctatus spawning season causes mosquito-infestation problems. A common solution to mosquito problems in hatcheries is to use mosquito repellents applied to exposed skin and clothing. DEET (N,N-diethyl-...

  17. [Potential-dependent Cation Selective Ion Channels Formed by Peroxiredoxin 6 in the Lipid Bilayer].

    Science.gov (United States)

    Grigoriev, P A; Sharapov, M G; Novoselov, V I

    2015-01-01

    The antioxidant enzyme peroxiredoxin 6 forms cation selective ion cluster-type channels in the lipid bilayer. Channel clustering as oligomeric structure consists of three or more subunits--channels with conductance of about 350 pS in the 200 mM KCl. Mean dwell time of the channel's open states decreases with increasing membrane voltage. A possible molecular mechanism of the observed potential-dependent inactivation of the channel cluster is discussed.

  18. Multi-Channel Retailing

    Directory of Open Access Journals (Sweden)

    Dirk Morschett, Dr.,

    2005-01-01

    Full Text Available Multi-channel retailing entails the parallel use by retailing enterprises of several sales channels. The results of an online buyer survey which has been conducted to investigate the impact of multi-channel retailing (i.e. the use of several retail channels by one retail company on consumer behaviour show that the frequently expressed concern that the application of multi-channel systems in retailing would be associated with cannibalization effects, has proven unfounded. Indeed, the appropriate degree of similarity, consistency, integration and agreement achieves the exact opposite. Different channels create different advantages for consumers. Therefore the total benefit an enterprise which has a multi-channel system can offer to its consumers is larger, the greater the number of available channels. The use of multi-channel systems is associated with additional purchases in the different channels. Such systems are thus superior to those offering only one sales channel to their customers. Furthermore, multi-channel systems with integrated channels are superior to those in which the channels are essentially autonomous and independent of one another. In integrated systems, consumers can achieve synergy effects in the use of sales-channel systems. Accordingly, when appropriately formulated, multi-channel systems in retailing impact positively on consumers. They use the channels more frequently, buy more from them and there is a positive customer-loyalty impact. Multi-channel systems are strategic options for achieving customer loyalty, exploiting customer potential and for winning new customers. They are thus well suited for approaching differing and varied target groups.

  19. Open life science research, open software and the open century

    Institute of Scientific and Technical Information of China (English)

    Youhua Chen

    2015-01-01

    At the age of knowledge explosion and mass scientific information, I highlighted the importance of conducting open science in life and medical researches through the extensive usage of open software and documents. The proposal of conducting open science is to reduce the limited repeatability of researches in life science. I outlined the essential steps for conducting open life science and the necessary standards for creating, reusing and reproducing open materials. Different Creative Commons licenses were presented and compared of their usage scope and restriction. As a conclusion, I argued that open materials should be widely adopted in doing life and medical researches.

  20. Magnetohydrodynamic (MHD) channel corner seal

    Science.gov (United States)

    Spurrier, Francis R.

    1980-01-01

    A corner seal for an MHD duct includes a compressible portion which contacts the duct walls and an insulating portion which contacts the electrodes, sidewall bars and insulators. The compressible portion may be a pneumatic or hydraulic gasket or an open-cell foam rubber. The insulating portion is segmented into a plurality of pieces of the same thickness as the electrodes, insulators and sidewall bars and aligned therewith, the pieces aligned with the insulator being of a different size from the pieces aligned with the electrodes and sidewall bars to create a stepped configuration along the corners of the MHD channel.

  1. CNG and HCN channels: two peas, one pod.

    Science.gov (United States)

    Craven, Kimberley B; Zagotta, William N

    2006-01-01

    Cyclic nucleotide-activated ion channels play a fundamental role in a variety of physiological processes. By opening in response to intracellular cyclic nucleotides, they translate changes in concentrations of signaling molecules to changes in membrane potential. These channels belong to two families: the cyclic nucleotide-gated (CNG) channels and the hyperpolarization-activated cyclic nucleotide-modulated (HCN) channels. The two families exhibit high sequence similarity and belong to the superfamily of voltage-gated potassium channels. Whereas HCN channels are activated by voltage and CNG channels are virtually voltage independent, both channels are activated by cyclic nucleotide binding. Furthermore, the channels are thought to have similar channel structures, leading to similar mechanisms of activation by cyclic nucleotides. However, although these channels are structurally and behaviorally similar, they have evolved to perform distinct physiological functions. This review describes the physiological roles and biophysical behavior of CNG and HCN channels. We focus on how similarities in structure and activation mechanisms result in common biophysical models, allowing CNG and HCN channels to be viewed as a single genre.

  2. Functional modifications of acid-sensing ion channels by ligand-gated chloride channels.

    Directory of Open Access Journals (Sweden)

    Xuanmao Chen

    Full Text Available Together, acid-sensing ion channels (ASICs and epithelial sodium channels (ENaC constitute the majority of voltage-independent sodium channels in mammals. ENaC is regulated by a chloride channel, the cystic fibrosis transmembrane conductance regulator (CFTR. Here we show that ASICs were reversibly inhibited by activation of GABA(A receptors in murine hippocampal neurons. This inhibition of ASICs required opening of the chloride channels but occurred with both outward and inward GABA(A receptor-mediated currents. Moreover, activation of the GABA(A receptors modified the pharmacological features and kinetic properties of the ASIC currents, including the time course of activation, desensitization and deactivation. Modification of ASICs by open GABA(A receptors was also observed in both nucleated patches and outside-out patches excised from hippocampal neurons. Interestingly, ASICs and GABA(A receptors interacted to regulate synaptic plasticity in CA1 hippocampal slices. The activation of glycine receptors, which are similar to GABA(A receptors, also modified ASICs in spinal neurons. We conclude that GABA(A receptors and glycine receptors modify ASICs in neurons through mechanisms that require the opening of chloride channels.

  3. Hadamard quantum broadcast channels

    Science.gov (United States)

    Wang, Qingle; Das, Siddhartha; Wilde, Mark M.

    2017-10-01

    We consider three different communication tasks for quantum broadcast channels, and we determine the capacity region of a Hadamard broadcast channel for these various tasks. We define a Hadamard broadcast channel to be such that the channel from the sender to one of the receivers is entanglement-breaking and the channel from the sender to the other receiver is complementary to this one. As such, this channel is a quantum generalization of a degraded broadcast channel, which is well known in classical information theory. The first communication task we consider is classical communication to both receivers, the second is quantum communication to the stronger receiver and classical communication to other, and the third is entanglement-assisted classical communication to the stronger receiver and unassisted classical communication to the other. The structure of a Hadamard broadcast channel plays a critical role in our analysis: The channel to the weaker receiver can be simulated by performing a measurement channel on the stronger receiver's system, followed by a preparation channel. As such, we can incorporate the classical output of the measurement channel as an auxiliary variable and solve all three of the above capacities for Hadamard broadcast channels, in this way avoiding known difficulties associated with quantum auxiliary variables.

  4. Open life science research, open software and the open century

    National Research Council Canada - National Science Library

    Youhua Chen

    2015-01-01

    At the age of knowledge explosion and mass scientific information, I highlighted the importance of conducting open science in life and medical researches through the extensive usage of open software and documents...

  5. Open Standards, Open Source, and Open Innovation: Harnessing the Benefits of Openness

    Science.gov (United States)

    Committee for Economic Development, 2006

    2006-01-01

    Digitization of information and the Internet have profoundly expanded the capacity for openness. This report details the benefits of openness in three areas--open standards, open-source software, and open innovation--and examines the major issues in the debate over whether openness should be encouraged or not. The report explains each of these…

  6. The S4-S5 linker couples voltage sensing and activation of pacemaker channels.

    Science.gov (United States)

    Chen, J; Mitcheson, J S; Tristani-Firouzi, M; Lin, M; Sanguinetti, M C

    2001-09-25

    Voltage-gated channels are normally opened by depolarization and closed by repolarization of the membrane. Despite sharing significant sequence homology with voltage-gated K(+) channels, the gating of hyperpolarization-activated, cyclic-nucleotide-gated (HCN) pacemaker channels has the opposite dependence on membrane potential: hyperpolarization opens, whereas depolarization closes, these channels. The mechanism and structural basis of the process that couples voltage sensor movement to HCN channel opening and closing is not understood. On the basis of our previous studies of a mutant HERG (human ether-a-go-go-related gene) channel, we hypothesized that the intracellular linker that connects the fourth and fifth transmembrane domains (S4-S5 linker) of HCN channels might be important for channel gating. Here, we used alanine-scanning mutagenesis of the HCN2 S4-S5 linker to identify three residues, E324, Y331, and R339, that when mutated disrupted normal channel closing. Mutation of a basic residue in the S4 domain (R318Q) prevented channel opening, presumably by disrupting S4 movement. However, channels with R318Q and Y331S mutations were constitutively open, suggesting that these channels can open without a functioning S4 domain. We conclude that the S4-S5 linker mediates coupling between voltage sensing and HCN channel activation. Our findings also suggest that opening of HCN and related channels corresponds to activation of a gate located near the inner pore, rather than recovery of channels from a C-type inactivated state.

  7. On the secrecy capacity of the MISO wiretap channel under imperfect channel estimation

    KAUST Repository

    Rezki, Zouheir

    2014-12-01

    We consider a wiretap channel consisting of a source with multiple antennas, a legitimate receiver and an eavesdropper with a single antenna each. The channels between the source and the receivers undergo fast fading. We assume that the transmitter, in addition to the statistics of both channels, is only aware of a noisy version of the CSI to the legitimate receiver referred to as main channel. The legitimate receiver is aware of both its instantaneous channel gain and the transmitter\\'s estimate of the main channel. On the other hand, the eavesdropper\\'s receiver, in addition to its instantaneous channel realization, is aware of the actual main CSI and the transmitter\\'s estimate as well. While the capacity of this channel is still open even with perfect CSI at the transmitter, we provide in this paper upper and lower bounds on the secrecy capacity. The upper bound is tighter than the one corresponding to perfect main CSI and the gap between the two upper bounds is characterized in function of the channel estimation error variance, at high-SNR. Furthermore, we show that our upper and lower bounds coincide in the case of no main CSI providing a trivial secrecy capacity.

  8. USACE Navigation Channels 2012

    Data.gov (United States)

    California Department of Resources — This dataset represents both San Francisco and Los Angeles District navigation channel lines. All San Francisco District channel lines were digitized from CAD files...

  9. Channelling versus inversion

    DEFF Research Database (Denmark)

    Gale, A.S.; Surlyk, Finn; Anderskouv, Kresten

    2013-01-01

    . Within this channel were smaller erosional structures (hardgrounds, and locally have a basal fill of granular phosphorite. The entire channel system was progressively infilled by chalk, as demonstrated by the expanded succession...

  10. OpenFlow Extensions for Programmable Quantum Networks

    Science.gov (United States)

    2017-06-19

    protocol to be used for detecting and correcting errors. 3.2 Switch In an SDN, switches function as fast-forwarding devices with no internal ...release; distribution is unlimited. 8 6. References 1. Dasari VR, Humble TS. OpenFlow arbitrated programmable network channels for managing quantum...Dasari VR, Humble TS. OpenFlow arbitrated programmable network channels for managing quantum metadata. Journal of Defense Modeling and Simulations

  11. First Things First: Internet Relay Chat Openings.

    Science.gov (United States)

    Rintel, E. Sean; Mulholland, Joan; Pittam, Jeffery

    2001-01-01

    Argues that Internet Relay Chat (IRC) research needs to systematically address links between interaction structures, technological mediation and the instantiation and development of interpersonal relationships. Finds that openings that occur directly following user's entries into public IRC channels are often ambiguous, can disrupt relationship…

  12. Open Personal Identity as a Service

    OpenAIRE

    Miroslav Behan

    2012-01-01

    The mobile computing established communication environment where personal identification is a key factor which influence usability of mobile application. Open personal identity is a partial service which enables crowd resource identifications processing in online distributive unified form over secured communication channel. The service provides current fresh personal identificators which are essential in communication process.

  13. First Things First: Internet Relay Chat Openings.

    Science.gov (United States)

    Rintel, E. Sean; Mulholland, Joan; Pittam, Jeffery

    2001-01-01

    Argues that Internet Relay Chat (IRC) research needs to systematically address links between interaction structures, technological mediation and the instantiation and development of interpersonal relationships. Finds that openings that occur directly following user's entries into public IRC channels are often ambiguous, can disrupt relationship…

  14. Quantum Multiple Access Channel

    Institute of Scientific and Technical Information of China (English)

    侯广; 黄民信; 张永德

    2002-01-01

    We consider the transmission of classical information over a quantum channel by many senders, which is a generalization of the two-sender case. The channel capacity region is shown to be a convex hull bound by the yon Neumann entropy and the conditional yon Neumann entropies. The result allows a reasonable distribution of channel capacity over the senders.

  15. Cardiac ion channels in health and disease.

    Science.gov (United States)

    Amin, Ahmad S; Tan, Hanno L; Wilde, Arthur A M

    2010-01-01

    Cardiac electrical activity depends on the coordinated propagation of excitatory stimuli through the heart and, as a consequence, the generation of action potentials in individual cardiomyocytes. Action potential formation results from the opening and closing (gating) of ion channels that are expressed within the sarcolemma of cardiomyocytes. Ion channels possess distinct genetic, molecular, pharmacologic, and gating properties and exhibit dissimilar expression levels within different cardiac regions. By gating, ion channels permit ion currents across the sarcolemma, thereby creating the different phases of the action potential (e.g., resting phase, depolarization, repolarization). The importance of ion channels in maintaining normal heart rhythm is reflected by the increased incidence of arrhythmias in inherited diseases that are linked to mutations in genes encoding ion channels or their accessory proteins and in acquired diseases that are associated with changes in ion channel expression levels or gating properties. This review discusses ion channels that contribute to action potential formation in healthy hearts and their role in inherited and acquired diseases.

  16. Quantum Interference and Selectivity through Biological Ion Channels

    Science.gov (United States)

    Salari, Vahid; Naeij, Hamidreza; Shafiee, Afshin

    2017-01-01

    The mechanism of selectivity in ion channels is still an open question in biology for more than half a century. Here, we suggest that quantum interference can be a solution to explain the selectivity mechanism in ion channels since interference happens between similar ions through the same size of ion channels. In this paper, we simulate two neighboring ion channels on a cell membrane with the famous double-slit experiment in physics to investigate whether there is any possibility of matter-wave interference of ions via movement through ion channels. Our obtained decoherence timescales indicate that the quantum states of ions can only survive for short times, i.e. ≈100 picoseconds in each channel and ≈17–53 picoseconds outside the channels, giving the result that the quantum interference of ions seems unlikely due to environmental decoherence. However, we discuss our results and raise few points, which increase the possibility of interference. PMID:28134331

  17. Interpreting the functional role of a novel interaction motif in prokaryotic sodium channels.

    Science.gov (United States)

    Sula, Altin; Wallace, B A

    2017-06-05

    Voltage-gated sodium channels enable the translocation of sodium ions across cell membranes and play crucial roles in electrical signaling by initiating the action potential. In humans, mutations in sodium channels give rise to several neurological and cardiovascular diseases, and hence they are targets for pharmaceutical drug developments. Prokaryotic sodium channel crystal structures have provided detailed views of sodium channels, which by homology have suggested potentially important functionally related structural features in human sodium channels. A new crystal structure of a full-length prokaryotic channel, NavMs, in a conformation we proposed to represent the open, activated state, has revealed a novel interaction motif associated with channel opening. This motif is associated with disease when mutated in human sodium channels and plays an important and dynamic role in our new model for channel activation. © 2017 Sula and Wallace.

  18. Ion channels in plants

    Science.gov (United States)

    Baluška, František; Mancuso, Stefano

    2013-01-01

    In his recent opus magnum review paper published in the October issue of Physiology Reviews, Rainer Hedrich summarized the field of plant ion channels.1 He started from the earliest electric recordings initiated by Charles Darwin of carnivorous Dionaea muscipula,1,2 known as Venus flytrap, and covered the topic extensively up to the most recent discoveries on Shaker-type potassium channels, anion channels of SLAC/SLAH families, and ligand-activated channels of glutamate receptor-like type (GLR) and cyclic nucleotide-gated channels (CNGC).1 PMID:23221742

  19. Protocol channels as a new design alternative of covert channels

    CERN Document Server

    Wendzel, Steffen

    2008-01-01

    Covert channel techniques are used by attackers to transfer hidden data. There are two main categories of covert channels: timing channels and storage channels. This paper introduces a third category called protocol channels. A protocol channel switches one of at least two protocols to send a bit combination to a destination while sent packets include no hidden information themselves.

  20. K ATP channels in pig and human intracranial arteries

    DEFF Research Database (Denmark)

    Ploug, Kenneth Beri; Sørensen, Mette Aaskov; Strøbech, Lotte Bjørg

    2008-01-01

    Clinical trials suggest that synthetic ATP-sensitive K(+) (K(ATP)) channel openers may cause headache and migraine by dilating cerebral and meningeal arteries. We studied the mRNA expression profile of K(ATP) channel subunits in the pig and human middle meningeal artery (MMA) and in the pig middle...... cerebral artery (MCA). We determined the order of potency of four K(ATP) channel openers when applied to isolated pig MMA and MCA, and we examined the potential inhibitory effects of the Kir6.1 subunit specific K(ATP) channel blocker PNU-37883A on K(ATP) channel opener-induced relaxation of the isolated...... pig MMA and MCA. Using conventional RT-PCR, we detected the mRNA transcripts of the K(ATP) channel subunits Kir6.1 and SUR2B in all the examined pig and human intracranial arteries. Application of K(ATP) channel openers to isolated pig MMA and MCA in myographs caused a concentration...

  1. Gating energies and forces of the mammalian hair cell transducer channel and related hair bundle mechanics

    NARCIS (Netherlands)

    van Netten, SM; Kros, CJ

    2000-01-01

    We quantified the molecular energies and forces involved in opening and closing of mechanoelectrical transducer channels in hair cells using a novel generally applicable method. It relies on a thermodynamic description of the free energy of an ion channel in terms of its open probability. The

  2. Freeing Worldview's development process: Open source everything!

    Science.gov (United States)

    Gunnoe, T.

    2016-12-01

    Freeing your code and your project are important steps for creating an inviting environment for collaboration, with the added side effect of keeping a good relationship with your users. NASA Worldview's codebase was released with the open source NOSA (NASA Open Source Agreement) license in 2014, but this is only the first step. We also have to free our ideas, empower our users by involving them in the development process, and open channels that lead to the creation of a community project. There are many highly successful examples of Free and Open Source Software (FOSS) projects of which we can take note: the Linux kernel, Debian, GNOME, etc. These projects owe much of their success to having a passionate mix of developers/users with a great community and a common goal in mind. This presentation will describe the scope of this openness and how Worldview plans to move forward with a more community-inclusive approach.

  3. Morphology of liquids spreading along open nanofluidic channels

    Science.gov (United States)

    Checco, Antonio

    2009-03-01

    Dynamic atomic force microscopy (AFM) in the non-contact regime is used to study the morphology of a non-volatile liquid (squalane) as it spreads along wettable nanostripes embedded in a non-wettable surface. AFM allows the direct observation of the microscopic contact line of spreading nanoliquids with unprecedented spatial resolution. Results show that the liquid profile depends on the amount of lateral confinement imposed by the nanostripes and it is truncated at the microscopic contact line in good qualitative agreement with classical mesoscale hydrodynamics. However, the width of the contact line is found to be significantly larger than expected theoretically. This behavior may originate from small chemical inhomogeneity of the patterned stripes as well as from thermal fluctuations of the contact line.

  4. Long-stroke open-channel reciprocating engines. Final report

    Energy Technology Data Exchange (ETDEWEB)

    Mizzi, J.V.

    1983-12-28

    Over the past two years, attempts have been made to demonstrate sustained automatic operation of both wind and water devices. Although this was not achieved, general feasibility of both varieties has been established, and design directions for solving remaining problems have emerged. The use of parachute type elements for both wind and water versions has proven to be workable. The ratios selected for step-up for both versions are also proper for the design wind and water current speeds. The remaining problems are in the area of the ''valving action'' from a low drag to a high drag/lift configuration and vice-versa. Other implementation problems involve handling of lines to prevent tangling. (It is well to note that the latter type of problem had been solved over half a century ago with respect to deep sea fishing gear).

  5. Stone stability under decelerating open-channel flow

    NARCIS (Netherlands)

    Hoan, N.T.; Booij, R.; Hofland, B.; Stive, M.J.F.; Verhagen, H.J.

    2007-01-01

    The current research is aimed at finding a proper relation between flow forces acting on the bed and the bed response. To this end, experiments were carried out in which both the bed response (quantified by a dimensionless entrainment rate) and the flow field (velocity and turbulence intensity

  6. Stability characteristics of hyper-concentration flow in open channel

    Institute of Scientific and Technical Information of China (English)

    2008-01-01

    The flow instability is related to many engineering problems and belongs to a wide-ranging research field. When the problem on the transition from the laminar to the turbulence caused by the instability of the laminar is studied,the "neutral line" and the critical Reynolds number are always taken as the criterion to judge whether a certain kind of flow is stable,whose corresponding flow medium is the clear water,that is,the single-phase Newtonian fluid. And it is not studied in the traditional in-stability theory that the hyper-concentration flow widely exists in rivers. This shortage can be covered by this research. Study shows that the instability of non-Newtonian fluid such as hyper-concentration fluid,compared with Newtonian fluid such as clear water,is influenced by not only Reynolds number,the ratio of the inertia force and the viscous force,but also many other factors such as the sediment concentration,the concentration distribution,the grain size,the volu-metric weight of the sediment and so on,which make the mechanical principle even more complex. So the results of the research can supply the scientific basis for the explanations of "slurrying river",the turbulence intensity of the flow carrying sediment and the variance of the turbulence structure.

  7. Stability characteristics of hyper-concentration flow in open channel

    Institute of Scientific and Technical Information of China (English)

    XU HaiJue; BAI YuChuan

    2008-01-01

    The flow instability is related to many engineering problems and belongs to a wide-rankling research field. When the problem on the transition from the laminar to the turbulence caused by the instability of the laminar is studied, the "neutral line" and the critical Reynolds number are always taken as the criterion to judge whether a certain kind of flow is stable, whose corresponding flow medium is the clear water, that is, the single-phase Newtonian fluid. And it is not studied in the traditional in-stability theory that the hyper-concentration flow widely exists in rivers. This shortage can be covered by this research. Study shows that the instability of non-Newtonian fluid such as hyper-concentration fluid, compared with Newtonian fluid such as clear water, is influenced by not only Reynolds number, the ratio of the inertia force and the viscous force, but also many other factors such as the sediment concentration, the concentration distribution, the grain size, the volu-metric weight of the sediment and so on, which make the mechanical principle even more complex. So the results of the research can supply the scientific basis for the explanations of "slurrying river", the turbulence intensity of the flow carrying sediment and the variance of the turbulence structure.

  8. Efficient mapping of ligand migration channel networks in dynamic proteins.

    Science.gov (United States)

    Lin, Tu-Liang; Song, Guang

    2011-08-01

    For many proteins such as myoglobin, the binding site lies in the interior, and there is no obvious route from the exterior to the binding site in the average structure. Although computer simulations for a limited number of proteins have found some transiently open channels, it is not clear if there exist more channels elsewhere or how the channels are regulated. A systematic approach that can map out the whole ligand migration channel network is lacking. Ligand migration in a dynamic protein resembles closely a well-studied problem in robotics, namely, the navigation of a mobile robot in a dynamic environment. In this work, we present a novel robotic motion planning inspired approach that can map the ligand migration channel network in a dynamic protein. The method combines an efficient spatial mapping of protein inner space with a temporal exploration of protein structural heterogeneity, which is represented by a structure ensemble. The spatial mapping of each conformation in the ensemble produces a partial map of protein inner cavities and their inter-connectivity. These maps are then merged to form a super map that contains all the channels that open dynamically. Results on the pathways in myoglobin for gaseous ligands demonstrate the efficiency of our approach in mapping the ligand migration channel networks. The results, obtained in a significantly less amount of time than trajectory-based approaches, are in agreement with previous simulation results. Additionally, the method clearly illustrates how and what conformational changes open or close a channel.

  9. Sandia OpenSHMEM

    Energy Technology Data Exchange (ETDEWEB)

    2016-03-15

    Sandia OpenSHMEM is an implementation of the OpenSHMEM Standard over the Portals 4 Networking API and the OpenFabrics Interface (OFI). Sandia OpenSHMEM is designed to be a low-overhead implementation of the OpenSHMEM standard which takes advantage of the many features of the Portals 4 specification.

  10. Open access, open education resources and open data in Uganda.

    Science.gov (United States)

    Salvo, Ivana Di; Mwoka, Meggie; Kwaga, Teddy; Rukundo, Priscilla Aceng; Ernest, Dennis Ssesanga; Osaheni, Louis Aikoriogie; John, Kasibante; Shafik, Kasirye; de Sousa, Agostinho Moreira

    2015-01-01

    As a follow up to OpenCon 2014, International Federation of Medical Students' Associations (IFMSA) students organized a 3 day workshop Open Access, Open Education Resources and Open Data in Kampala from 15-18 December 2014. One of the aims of the workshop was to engage the Open Access movement in Uganda which encompasses the scientific community, librarians, academia, researchers and students. The IFMSA students held the workshop with the support of: Consortium for Uganda University Libraries (CUUL), The Right to Research Coalition, Electronic Information for Libraries (EIFL), Makerere University, International Health Sciences University (IHSU), Pan African Medical Journal (PAMJ) and the Centre for Health Human Rights and Development (CEHURD). All these organizations are based or have offices in Kampala. The event culminated in a meeting with the Science and Technology Committee of Parliament of Uganda in order to receive the support of the Ugandan Members of Parliament and to make a concrete change for Open Access in the country.

  11. Presence and vascular pharmacology of KATP channel subtypes in rat central and peripheral tissues

    DEFF Research Database (Denmark)

    Ploug, Kenneth Beri; Baun, Michael; Hay-Schmidt, Anders

    2010-01-01

    K(ATP) channel openers are vasodilators and induce headache in normal subjects. We previously identified the Kir6.1/SUR2B K(ATP) channel subtype in major cerebral and dural arteries of rat, pig and man. We hypothesized that craniovascular Kir6.1/SUR2B K(ATP) channels mediate the headache-inducing...

  12. POTASSIUM CHANNELS IN HYPOKALEMIC PERIODIC PARALYSIS - A KEY TO THE PATHOGENESIS

    NARCIS (Netherlands)

    LINKS, TP; SMIT, AJ; OOSTERHUIS, HJGH; REITSMA, WD

    1993-01-01

    1. A possible role for the ATP-sensitive potassium channels in the pathogenesis of hypokalaemic periodic paralysis was investigated. 2. We assessed insulin release and muscle strength after intravenous glucose loading with and without the potassium channel opener pinacidil and the potassium channel

  13. Combinatorial Strategies and High Throughput Screening in Drug Discovery Targeted to the Channel of Botulinum Neurotoxin

    Science.gov (United States)

    2006-09-01

    M2 protein2 and its derivative, memantine, which blocks the NMDA receptor channel3, and is approved by the FDA for the treatment of dementia ...The antipsychotic chlorpromazine4, an open channel blocker of the nicotinic acetylcholine receptor (nAChR) channel5, and numerous local

  14. POTASSIUM CHANNELS IN HYPOKALEMIC PERIODIC PARALYSIS - A KEY TO THE PATHOGENESIS

    NARCIS (Netherlands)

    LINKS, TP; SMIT, AJ; OOSTERHUIS, HJGH; REITSMA, WD

    1993-01-01

    1. A possible role for the ATP-sensitive potassium channels in the pathogenesis of hypokalaemic periodic paralysis was investigated. 2. We assessed insulin release and muscle strength after intravenous glucose loading with and without the potassium channel opener pinacidil and the potassium channel

  15. Quantum biological channel modeling and capacity calculation.

    Science.gov (United States)

    Djordjevic, Ivan B

    2012-12-10

    Quantum mechanics has an important role in photosynthesis, magnetoreception, and evolution. There were many attempts in an effort to explain the structure of genetic code and transfer of information from DNA to protein by using the concepts of quantum mechanics. The existing biological quantum channel models are not sufficiently general to incorporate all relevant contributions responsible for imperfect protein synthesis. Moreover, the problem of determination of quantum biological channel capacity is still an open problem. To solve these problems, we construct the operator-sum representation of biological channel based on codon basekets (basis vectors), and determine the quantum channel model suitable for study of the quantum biological channel capacity and beyond. The transcription process, DNA point mutations, insertions, deletions, and translation are interpreted as the quantum noise processes. The various types of quantum errors are classified into several broad categories: (i) storage errors that occur in DNA itself as it represents an imperfect storage of genetic information, (ii) replication errors introduced during DNA replication process, (iii) transcription errors introduced during DNA to mRNA transcription, and (iv) translation errors introduced during the translation process. By using this model, we determine the biological quantum channel capacity and compare it against corresponding classical biological channel capacity. We demonstrate that the quantum biological channel capacity is higher than the classical one, for a coherent quantum channel model, suggesting that quantum effects have an important role in biological systems. The proposed model is of crucial importance towards future study of quantum DNA error correction, developing quantum mechanical model of aging, developing the quantum mechanical models for tumors/cancer, and study of intracellular dynamics in general.

  16. Quantum Biological Channel Modeling and Capacity Calculation

    Directory of Open Access Journals (Sweden)

    Ivan B. Djordjevic

    2012-12-01

    Full Text Available Quantum mechanics has an important role in photosynthesis, magnetoreception, and evolution. There were many attempts in an effort to explain the structure of genetic code and transfer of information from DNA to protein by using the concepts of quantum mechanics. The existing biological quantum channel models are not sufficiently general to incorporate all relevant contributions responsible for imperfect protein synthesis. Moreover, the problem of determination of quantum biological channel capacity is still an open problem. To solve these problems, we construct the operator-sum representation of biological channel based on codon basekets (basis vectors, and determine the quantum channel model suitable for study of the quantum biological channel capacity and beyond. The transcription process, DNA point mutations, insertions, deletions, and translation are interpreted as the quantum noise processes. The various types of quantum errors are classified into several broad categories: (i storage errors that occur in DNA itself as it represents an imperfect storage of genetic information, (ii replication errors introduced during DNA replication process, (iii transcription errors introduced during DNA to mRNA transcription, and (iv translation errors introduced during the translation process. By using this model, we determine the biological quantum channel capacity and compare it against corresponding classical biological channel capacity. We demonstrate that the quantum biological channel capacity is higher than the classical one, for a coherent quantum channel model, suggesting that quantum effects have an important role in biological systems. The proposed model is of crucial importance towards future study of quantum DNA error correction, developing quantum mechanical model of aging, developing the quantum mechanical models for tumors/cancer, and study of intracellular dynamics in general.

  17. Turbine component having surface cooling channels and method of forming same

    Energy Technology Data Exchange (ETDEWEB)

    Miranda, Carlos Miguel; Trimmer, Andrew Lee; Kottilingam, Srikanth Chandrudu

    2017-09-05

    A component for a turbine engine includes a substrate that includes a first surface, and an insert coupled to the substrate proximate the substrate first surface. The component also includes a channel. The channel is defined by a first channel wall formed in the substrate and a second channel wall formed by at least one coating disposed on the substrate first surface. The component further includes an inlet opening defined in flow communication with the channel. The inlet opening is defined by a first inlet wall formed in the substrate and a second inlet wall defined by the insert.

  18. Le Chatelier's principle with multiple relaxation channels

    Science.gov (United States)

    Gilmore, R.; Levine, R. D.

    1986-05-01

    Le Chatelier's principle is discussed within the constrained variational approach to thermodynamics. The formulation is general enough to encompass systems not in thermal (or chemical) equilibrium. Particular attention is given to systems with multiple constraints which can be relaxed. The moderation of the initial perturbation increases as additional constraints are removed. This result is studied in particular when the (coupled) relaxation channels have widely different time scales. A series of inequalities is derived which describes the successive moderation as each successive relaxation channel opens up. These inequalities are interpreted within the metric-geometry representation of thermodynamics.

  19. Analysis of Cisco Open Network Environment (ONE) OpenFlow Controller Implementation

    Science.gov (United States)

    2014-08-01

    or match criteria to ports that are not connected) as well as the ability to install and uninstall a flow from switches without deleting it entirely...Port recognition Not explicit Yes Install/ uninstall flows NA Yes Set dynamic flows Requires code manipulation Yes 6 5.2 OpenFlow Control Channel...Setup The initial handshake between the controller and switch was monitored using packet analysis tools capable of understanding OpenFlow protocol

  20. Open heart surgery

    Science.gov (United States)

    Heart surgery - open ... lung machine is used in most cases during open heart surgery. While the surgeon works on the ... with these procedures, the surgeon may have to open the chest to do the surgery.

  1. Differential effects of ICA-27243 on cloned K(V)7 channels

    DEFF Research Database (Denmark)

    Blom, Sigrid Marie; Schmitt, Nicole; Jensen, Henrik Sindal

    2010-01-01

    the neuronal K(V)7 family members (K(V)7.2-5) are important regulators of neuronal excitability. K(V)7 channel openers are therefore attractive drug candidates for the treatment of several hyperexcitability disorders. While most described K(V)7 channel openers discriminate poorly between K(V)7...... the combinatorial effect of retigabine and ICA-27243, as these two compounds recognize different binding sites in the channels....

  2. Apraxia of lid opening

    Directory of Open Access Journals (Sweden)

    Jebasingh Y

    2006-01-01

    Full Text Available Apraxia of lid opening is a condition where patients do not have ptosis but have difficulty in overcoming levator palpebrae inhibition. We report a patient who presented with difficulty in opening eyelids with out diurnal variation, ptosis or blepharospasm. The diagnosis of Apraxia of lid opening is confirmed by electro physiology. The possibility of apraxia of lid opening should be considered in patients who present with difficulty in opening eyes. Various causes of Apraxia of lid opening are discussed.

  3. Quantum broadcast channels

    CERN Document Server

    Yard, J; Devetak, I; Yard, Jon; Hayden, Patrick; Devetak, Igor

    2006-01-01

    We analyze quantum broadcast channels, which are quantum channels with a single sender and many receivers. Focusing on channels with two receivers for simplicity, we generalize a number of results from the network Shannon theory literature which give the rates at which two senders can receive a common message, while a personalized one is sent to one of them. Our first collection of results applies to channels with a classical input and quantum outputs. The second class of theorems we prove concern sending a common classical message over a quantum broadcast channel, while sending quantum information to one of the receivers. The third group of results we obtain concern communication over an isometry, giving the rates at quantum information can be sent to one receiver, while common quantum information is sent to both, in the sense that tripartite GHZ entanglement is established. For each scenario, we provide an additivity proof for an appropriate class of channels, yielding single-letter characterizations of the...

  4. Volume Regulated Channels

    DEFF Research Database (Denmark)

    Klausen, Thomas Kjær

    of volume perturbations evolution have developed system of channels and transporters to tightly control volume homeostasis. In the past decades evidence has been mounting, that the importance of these volume regulated channels and transporters are not restricted to the defense of cellular volume...... but are also essential for a number of physiological processes such as proliferation, controlled cell death, migration and endocrinology. The thesis have been focusing on two Channels, namely the swelling activated Cl- channel (ICl, swell) and the transient receptor potential Vanilloid (TRPV4) channel. I: Cl......- serves a multitude of functions in the mammalian cell, regulating the membrane potential (Em), cell volume, protein activity and the driving force for facilitated transporters giving Cl- and Cl- channels a major potential of regulating cellular function. These functions include control of the cell cycle...

  5. A novel potassium channel in photosynthetic cyanobacteria.

    Directory of Open Access Journals (Sweden)

    Manuela Zanetti

    Full Text Available Elucidation of the structure-function relationship of a small number of prokaryotic ion channels characterized so far greatly contributed to our knowledge on basic mechanisms of ion conduction. We identified a new potassium channel (SynK in the genome of the cyanobacterium Synechocystis sp. PCC6803, a photosynthetic model organism. SynK, when expressed in a K(+-uptake-system deficient E. coli strain, was able to recover growth of these organisms. The protein functions as a potassium selective ion channel when expressed in Chinese hamster ovary cells. The location of SynK in cyanobacteria in both thylakoid and plasmamembranes was revealed by immunogold electron microscopy and Western blotting of isolated membrane fractions. SynK seems to be conserved during evolution, giving rise to a TPK (two-pore K(+ channel family member which is shown here to be located in the thylakoid membrane of Arabidopsis. Our work characterizes a novel cyanobacterial potassium channel and indicates the molecular nature of the first higher plant thylakoid cation channel, opening the way to functional studies.

  6. Ion channels in asthma.

    Science.gov (United States)

    Valverde, Miguel A; Cantero-Recasens, Gerard; Garcia-Elias, Anna; Jung, Carole; Carreras-Sureda, Amado; Vicente, Rubén

    2011-09-23

    Ion channels are specialized transmembrane proteins that permit the passive flow of ions following their electrochemical gradients. In the airways, ion channels participate in the production of epithelium-based hydroelectrolytic secretions and in the control of intracellular Ca(2+) levels that will ultimately activate almost all lung cells, either resident or circulating. Thus, ion channels have been the center of many studies aiming to understand asthma pathophysiological mechanisms or to identify therapeutic targets for better control of the disease. In this minireview, we focus on molecular, genetic, and animal model studies associating ion channels with asthma.

  7. Quantum feedback channels

    CERN Document Server

    Bowen, G

    2002-01-01

    In classical information theory the capacity of a noisy communication channel cannot be increased by the use of feedback. In quantum information theory the no-cloning theorem means that noiseless copying and feedback of quantum information cannot be achieved. In this paper, quantum feedback is defined as the unlimited use of a noiseless quantum channel from receiver to sender. Given such quantum feedback, it is shown to provide no increase in the entanglement-assisted capacities of a noisy quantum channel, in direct analogy to the classical case. It is also shown that in various cases of non-assisted capacities, feedback can increase the capacity of many quantum channels.

  8. TRP channels in schistosomes

    Directory of Open Access Journals (Sweden)

    Swarna Bais

    2016-12-01

    Full Text Available Praziquantel (PZQ is effectively the only drug currently available for treatment and control of schistosomiasis, a disease affecting hundreds of millions of people worldwide. Many anthelmintics, likely including PZQ, target ion channels, membrane protein complexes essential for normal functioning of the neuromusculature and other tissues. Despite this fact, only a few classes of parasitic helminth ion channels have been assessed for their pharmacological properties or for their roles in parasite physiology. One such overlooked group of ion channels is the transient receptor potential (TRP channel superfamily. TRP channels share a common core structure, but are widely diverse in their activation mechanisms and ion selectivity. They are critical to transducing sensory signals, responding to a wide range of external stimuli. They are also involved in other functions, such as regulating intracellular calcium and organellar ion homeostasis and trafficking. Here, we review current literature on parasitic helminth TRP channels, focusing on those in schistosomes. We discuss the likely roles of these channels in sensory and locomotor activity, including the possible significance of a class of TRP channels (TRPV that is absent in schistosomes. We also focus on evidence indicating that at least one schistosome TRP channel (SmTRPA has atypical, TRPV1-like pharmacological sensitivities that could potentially be exploited for future therapeutic targeting.

  9. KV7 potassium channels

    DEFF Research Database (Denmark)

    Stott, Jennifer B; Jepps, Thomas Andrew; Greenwood, Iain A

    2014-01-01

    identified as being crucial mediators of this process in a variety of smooth muscle. Recently, KV7 channels have been shown to be involved in the pathogenesis of hypertension, as well as being implicated in other smooth muscle disorders, providing a new and inviting target for smooth muscle disorders.......Potassium channels are key regulators of smooth muscle tone, with increases in activity resulting in hyperpolarisation of the cell membrane, which acts to oppose vasoconstriction. Several potassium channels exist within smooth muscle, but the KV7 family of voltage-gated potassium channels have been...

  10. Drosophila KCNQ channel displays evolutionarily conserved electrophysiology and pharmacology with mammalian KCNQ channels.

    Directory of Open Access Journals (Sweden)

    Sonia Cavaliere

    Full Text Available Of the five human KCNQ (Kv7 channels, KCNQ1 with auxiliary subunit KCNE1 mediates the native cardiac I(Ks current with mutations causing short and long QT cardiac arrhythmias. KCNQ4 mutations cause deafness. KCNQ2/3 channels form the native M-current controlling excitability of most neurons, with mutations causing benign neonatal febrile convulsions. Drosophila contains a single KCNQ (dKCNQ that appears to serve alone the functions of all the duplicated mammalian neuronal and cardiac KCNQ channels sharing roughly 50-60% amino acid identity therefore offering a route to investigate these channels. Current information about the functional properties of dKCNQ is lacking therefore we have investigated these properties here. Using whole cell patch clamp electrophysiology we compare the biophysical and pharmacological properties of dKCNQ with the mammalian neuronal and cardiac KCNQ channels expressed in HEK cells. We show that Drosophila KCNQ (dKCNQ is a slowly activating and slowly-deactivating K(+ current open at sub-threshold potentials that has similar properties to neuronal KCNQ2/3 with some features of the cardiac KCNQ1/KCNE1 accompanied by conserved sensitivity to a number of clinically relevant KCNQ blockers (chromanol 293B, XE991, linopirdine and opener (zinc pyrithione. We also investigate the molecular basis of the differential selectivity of KCNQ channels to the opener retigabine and show a single amino acid substitution (M217W can confer sensitivity to dKCNQ. We show dKCNQ has similar electrophysiological and pharmacological properties as the mammalian KCNQ channels, allowing future study of physiological and pathological roles of KCNQ in Drosophila and whole organism screening for new modulators of KCNQ channelopathies.

  11. Preliminary Skylab MSS channel evaluation. [Susquehanna river basin

    Science.gov (United States)

    Mcmurtry, G. J.; Petersen, G. W. (Principal Investigator); Barr, D. M.; Borden, F. Y.

    1975-01-01

    The author has identified the following significant results. A set of 18 channels which were considered of usable quality were identified. These were channels 1-14, 17, 19-21. Channels 15, 16, 18, and 22 were dropped out because they were of poor quality; channels 7 and 11 were dropped to limit the total channel number to 16. From these 16 channels, a total of 22 signatures were obtained. Eight were developed from uniform blocks of the UMAP, and 14 from use of the DCLUS program. These signatures fell into six basic categories and classified more than 90% of the five scenes mapped: agriculture land (6 signatures); forest aland (4); water (2); open nonagriculture land (2); urban (6); and disturbed land (2).

  12. A linearization of quantum channels

    Science.gov (United States)

    Crowder, Tanner

    2015-06-01

    Because the quantum channels form a compact, convex set, we can express any quantum channel as a convex combination of extremal channels. We give a Euclidean representation for the channels whose inverses are also valid channels; these are a subset of the extreme points. They form a compact, connected Lie group, and we calculate its Lie algebra. Lastly, we calculate a maximal torus for the group and provide a constructive approach to decomposing any invertible channel into a product of elementary channels.

  13. Ion channels in toxicology.

    Science.gov (United States)

    Restrepo-Angulo, Iván; De Vizcaya-Ruiz, Andrea; Camacho, Javier

    2010-08-01

    Ion channels play essential roles in human physiology and toxicology. Cardiac contraction, neural transmission, temperature sensing, insulin release, regulation of apoptosis, cellular pH and oxidative stress, as well as detection of active compounds from chilli, are some of the processes in which ion channels have an important role. Regulation of ion channels by several chemicals including those found in air, water and soil represents an interesting potential link between environmental pollution and human diseases; for instance, de novo expression of ion channels in response to exposure to carcinogens is being considered as a potential tool for cancer diagnosis and therapy. Non-specific binding of several drugs to ion channels is responsible for a huge number of undesirable side-effects, and testing guidelines for several drugs now require ion channel screening for pharmaceutical safety. Animal toxins targeting human ion channels have serious effects on the population and have also provided a remarkable tool to study the molecular structure and function of ion channels. In this review, we will summarize the participation of ion channels in biological processes extensively used in toxicological studies, including cardiac function, apoptosis and cell proliferation. Major findings on the adverse effects of drugs on ion channels as well as the regulation of these proteins by different chemicals, including some pesticides, are also reviewed. Association of ion channels and toxicology in several biological processes strongly suggests these proteins to be excellent candidates to follow the toxic effects of xenobiotics, and as potential early indicators of life-threatening situations including chronic degenerative diseases.

  14. Reconstitution of highly purified saxitoxin-sensitive Na+-channels into planar lipid bilayers.

    OpenAIRE

    Hanke, W.; Boheim, G; Barhanin, J; Pauron, D; Lazdunski, M

    1984-01-01

    Highly purified Na+-channels isolated from rat brain have been reconstituted into virtually solvent-free planar lipid bilayer membranes. Two different types of electrically excitable channels were detected in the absence of any neurotoxins. The activity of both channels was blocked by saxitoxin. The first channel type is highly selective for Na+ over K+ (approximately 10:1), it shows a bursting behavior, a conductance of 25 pS in Na+-Ringer and undergoes continuous opening and closing events ...

  15. A novel potassium channel in skeletal muscle mitochondria.

    Science.gov (United States)

    Skalska, Jolanta; Piwońska, Marta; Wyroba, Elzbieta; Surmacz, Liliana; Wieczorek, Rafal; Koszela-Piotrowska, Izabela; Zielińska, Joanna; Bednarczyk, Piotr; Dołowy, Krzysztof; Wilczynski, Grzegorz M; Szewczyk, Adam; Kunz, Wolfram S

    2008-01-01

    In this work we provide evidence for the potential presence of a potassium channel in skeletal muscle mitochondria. In isolated rat skeletal muscle mitochondria, Ca(2+) was able to depolarize the mitochondrial inner membrane and stimulate respiration in a strictly potassium-dependent manner. These potassium-specific effects of Ca(2+) were completely abolished by 200 nM charybdotoxin or 50 nM iberiotoxin, which are well-known inhibitors of large conductance, calcium-activated potassium channels (BK(Ca) channel). Furthermore, NS1619, a BK(Ca)-channel opener, mimicked the potassium-specific effects of calcium on respiration and mitochondrial membrane potential. In agreement with these functional data, light and electron microscopy, planar lipid bilayer reconstruction and immunological studies identified the BK(Ca) channel to be preferentially located in the inner mitochondrial membrane of rat skeletal muscle fibers. We propose that activation of mitochondrial K(+) transport by opening of the BK(Ca) channel may be important for myoprotection since the channel opener NS1619 protected the myoblast cell line C2C12 against oxidative injury.

  16. Effects of fractal gating of potassium channels on neuronal behaviours

    Science.gov (United States)

    Zhao, De-Jiang; Zeng, Shang-You; Zhang, Zheng-Zhen

    2010-10-01

    The classical model of voltage-gated ion channels assumes that according to a Markov process ion channels switch among a small number of states without memory, but a bunch of experimental papers show that some ion channels exhibit significant memory effects, and this memory effects can take the form of kinetic rate constant that is fractal. Obviously the gating character of ion channels will affect generation and propagation of action potentials, furthermore, affect generation, coding and propagation of neural information. However, there is little previous research on this series of interesting issues. This paper investigates effects of fractal gating of potassium channel subunits switching from closed state to open state on neuronal behaviours. The obtained results show that fractal gating of potassium channel subunits switching from closed state to open state has important effects on neuronal behaviours, increases excitability, rest potential and spiking frequency of the neuronal membrane, and decreases threshold voltage and threshold injected current of the neuronal membrane. So fractal gating of potassium channel subunits switching from closed state to open state can improve the sensitivity of the neuronal membrane, and enlarge the encoded strength of neural information.

  17. Resonances in Coupled-Channel Scattering

    CERN Document Server

    Wilson, David J

    2016-01-01

    Excited hadrons are seen as resonances in the scattering of lighter stable hadrons like $\\pi$, $K$ and $\\eta$. Many decay into multiple final states necessitating coupled-channel analyses. Recently it has become possible to obtain coupled-channel scattering amplitudes from lattice QCD. Using large diverse bases of operators it is possible to obtain reliable finite volume spectra at energies where multiple channels are open. Utilising the finite volume formalism proposed by L\\"uscher and extended by several others, scattering amplitudes can be extracted from the finite volume spectra. Recent applications will be discussed where the energy dependence of scattering amplitudes is mapped out in several quantum numbers. These are then continued to complex energies to extract resonance poles and couplings.

  18. Vector Broadcast Channels: Optimal Threshold Selection Problem

    CERN Document Server

    Samarasinghe, Tharaka; Evans, Jamie

    2011-01-01

    Threshold feedback policies are well known and provably rate-wise optimal selective feedback techniques for communication systems requiring partial channel state information (CSI). However, optimal selection of thresholds at mobile users to maximize information theoretic data rates subject to feedback constraints is an open problem. In this paper, we focus on the optimal threshold selection problem, and provide a solution for this problem for finite feedback systems. Rather surprisingly, we show that using the same threshold values at all mobile users is not always a rate-wise optimal feedback strategy, even for a system with identical users experiencing statistically the same channel conditions. By utilizing the theory of majorization, we identify an underlying Schur-concave structure in the rate function and obtain sufficient conditions for a homogenous threshold feedback policy to be optimal. Our results hold for most fading channel models, and we illustrate an application of our results to familiar Raylei...

  19. Lack of conventional ATPase properties in CFTR chloride channel gating.

    Science.gov (United States)

    Schultz, B D; Bridges, R J; Frizzell, R A

    1996-05-01

    CFTR shares structural homology with the ABC transporter superfamily of proteins which hydrolyze ATP to effect the transport of compounds across cell membranes. Some superfamily members are characterized as P-type ATPases because ATP-dependent transport is sensitive to the presence of vanadate. It has been widely postulated that CFTR hydrolyzes ATP to gate its chloride channel. However, direct evidence of CFTR hydrolytic activity in channel gating is lacking and existing circumstantial evidence is contradictory. Therefore, we evaluated CFTR chloride channel activity under conditions known to inhibit the activity of ATPases; i.e., in the absence of divalent cations and in the presence of a variety of ATPase inhibitors. Removal of the cytosolic cofactor, Mg2+, reduced both the opening and closing rates of CFTR suggesting that Mg2+ plays a modulatory role in channel gating. However, channels continued to both open and close showing that Mg2+ is not an absolute requirement for channel activity. The nonselective P-type ATPase inhibitor, vanadate, did not alter the gating of CFTR when used at concentrations which completely inhibit the activity of other ABC transporters (1 mM). Higher concentrations of vanadate (10 mM) blocked the closing of CFTR, but did not affect the opening of the channel. As expected, more selective P-type (Sch28080, ouabain), V-type (bafilomycin A1, SCN-) and F-type (oligomycin) ATPase inhibitors did not affect either the opening or closing of CFTR. Thus, CFTR does not share a pharmacological inhibition profile with other ATPases and channel gating occurs in the apparent absence of hydrolysis, although with altered kinetics. Vanadate inhibition of channel closure might suggest that a hydrolytic step is involved although the requirement for a high concentration raises the possibility of previously uncharacterized effects of this compound. Most conservatively, the requirement for high concentrations of vanadate demonstrates that the binding site for

  20. Glaucoma, Open-Angle

    Science.gov (United States)

    ... Programs Home > Statistics and Data > Glaucoma, Open-angle Glaucoma, Open-angle Open-angle Glaucoma Defined In open-angle glaucoma, the fluid passes ... 2010 2010 U.S. Age-Specific Prevalence Rates for Glaucoma by Age and Race/Ethnicity The prevalence of ...

  1. JISC Open Access Briefing Paper

    OpenAIRE

    Swan, Alma

    2005-01-01

    What Open Access is. What Open Access is not. How is Open Access provided? Open Access archives or repositories. Open Access journals. Why should authors provide Open Access to their work? Further information and resources

  2. JISC Open Access Briefing Paper

    OpenAIRE

    Swan, Alma

    2005-01-01

    What Open Access is. What Open Access is not. How is Open Access provided? Open Access archives or repositories. Open Access journals. Why should authors provide Open Access to their work? Further information and resources

  3. State-dependent FRET reports calcium- and voltage-dependent gating-ring motions in BK channels

    OpenAIRE

    Miranda, Pablo; Contreras, Jorge E.; Plested, Andrew J. R.; Sigworth, Fred J.; Holmgren, Miguel; Giraldez, Teresa

    2013-01-01

    Large-conductance voltage- and calcium-dependent potassium channels (BK, “Big K+”) are important controllers of cell excitability. In the BK channel, a large C-terminal intracellular region containing a “gating-ring” structure has been proposed to transduce Ca2+ binding into channel opening. Using patch-clamp fluorometry, we have investigated the calcium and voltage dependence of conformational changes of the gating-ring region of BK channels, while simultaneously monitoring channel conductan...

  4. Small Terminal MIMO Channels with User Interaction

    DEFF Research Database (Denmark)

    Pedersen, Gert Frølund; Andersen, Jørgen Bach; Eggers, Patrick Claus F.

    2007-01-01

    This paper gives an overview of results obtained from measurements of different types of multiple-input multiple-output (MIMO) channels. For the indoor case measurements were made at 5.8 GHz from access points (APs) to mobile stations (MSs) at different places in a large open office type room. Th...... an investigation of the potentials for communication between cars approaching as well as in convoy and from inside and outside the car....

  5. OpenGL Insights

    CERN Document Server

    Cozzi, Patrick

    2012-01-01

    Get Real-World Insight from Experienced Professionals in the OpenGL Community With OpenGL, OpenGL ES, and WebGL, real-time rendering is becoming available everywhere, from AAA games to mobile phones to web pages. Assembling contributions from experienced developers, vendors, researchers, and educators, OpenGL Insights presents real-world techniques for intermediate and advanced OpenGL, OpenGL ES, and WebGL developers. Go Beyond the Basics The book thoroughly covers a range of topics, including OpenGL 4.2 and recent extensions. It explains how to optimize for mobile devices, explores the design

  6. Dimensions of Openness

    DEFF Research Database (Denmark)

    Dalsgaard, Christian; Thestrup, Klaus

    2015-01-01

    as a matter of engaging educational activities in sociocultural practices of a surrounding society. Openness is not only a matter of opening up the existing, but of developing new educational practices that interact with society. The paper outlines three pedagogical dimensions of openness: transparency...... practices. Openness as joint engagement in the world aims at establishing interdependent collaborative relationships between educational institutions and external practices. To achieve these dimensions of openness, educational activities need to change and move beyond the course as the main format...... for openness. With examples from a university case, the paper discusses how alternative pedagogical formats and educational technologies can support the three dimensions of openness....

  7. Generalized channeled polarimetry.

    Science.gov (United States)

    Alenin, Andrey S; Tyo, J Scott

    2014-05-01

    Channeled polarimeters measure polarization by modulating the measured intensity in order to create polarization-dependent channels that can be demodulated to reveal the desired polarization information. A number of channeled systems have been described in the past, but their proposed designs often unintentionally sacrifice optimality for ease of algebraic reconstruction. To obtain more optimal systems, a generalized treatment of channeled polarimeters is required. This paper describes methods that enable handling of multi-domain modulations and reconstruction of polarization information using linear algebra. We make practical choices regarding use of either Fourier or direct channels to make these methods more immediately useful. Employing the introduced concepts to optimize existing systems often results in superficial system changes, like changing the order, orientation, thickness, or spacing of polarization elements. For the two examples we consider, we were able to reduce noise in the reconstruction to 34.1% and 57.9% of the original design values.

  8. Athermalized channeled spectropolarimeter enhancement.

    Energy Technology Data Exchange (ETDEWEB)

    Jones, Julia Craven; Way, Brandyn Michael; Mercier, Jeffrey Alan; Hunt, Jeffery P.

    2013-09-01

    Channeled spectropolarimetry can measure the complete polarization state of light as a function of wavelength. Typically, a channeled spectropolarimeter uses high order retarders made of uniaxial crystal to amplitude modulate the measured spectrum with the spectrally-dependent Stokes polarization information. A primary limitation of conventional channeled spectropolarimeters is related to the thermal variability of the retarders. Thermal variation often forces frequent system recalibration, particularly for field deployed systems. However, implementing thermally stable retarders, made of biaxial crystal, results in an athermal channeled spectropolarimeter that relieves the need for frequent recalibration. This report presents experimental results for an anthermalized channeled spectropolarimeter prototype produced using potassium titanyl phosphate. The results of this prototype are compared to the current thermal stabilization state of the art. Finally, the application of the technique to the thermal infrared is studied, and the athermalization concept is applied to an infrared imaging spectropolarimeter design.

  9. Open access and open source in chemistry

    Directory of Open Access Journals (Sweden)

    Todd Matthew H

    2007-02-01

    Full Text Available Abstract Scientific data are being generated and shared at ever-increasing rates. Two new mechanisms for doing this have developed: open access publishing and open source research. We discuss both, with recent examples, highlighting the differences between the two, and the strengths of both.

  10. Een boekje open over Open Source ERP

    NARCIS (Netherlands)

    Sneller, A.C.W.(L.)

    2009-01-01

    Er zijn vele ERP-systemen die met behulp van open source worden ontwikkeld. Organisaties die open source ERP willen implementeren staan voor twee strategische keuzes: hoe zit het met de continuïteit en wie gaat het systeem onderhouden?

  11. Open Government and (Linked (Open (Government (Data

    Directory of Open Access Journals (Sweden)

    Christian Philipp Geiger

    2012-12-01

    Full Text Available This article explores the opening and the free usage of stored public sector data, supplied by state. In the age of Open Government and Open Data it’s not enough just to put data online. It should be rather weighed out whether, how and which supplied public sector data can be published. Open Data are defined as stored data which could be made accessible in a public interest without any restrictions for usage and distribution. These Open Data can possibly be statistics, geo data, maps, plans, environmental data and weather data in addition to materials of the parliaments, ministries and authorities. The preparation and the free access to existing data permit varied approaches to the reuse of data, discussed in the article. In addition, impulses can be given for Open Government – the opening of state and administration, to more transparency, participation and collaboration as well as to innovation and business development. The Open Data movement tries to get to the bottom of current publication processes in the public sector which could be formed even more friendly to citizens and enterprises.

  12. Evidence for nonlinear capacitance in biomembrane channel system.

    Science.gov (United States)

    Ghosh, S; Bera, A K; Das, S

    1999-10-01

    The electrophysiological properties of voltage-dependent anion channels from mitochondrial membrane have been studied in a bilayer membrane system. It was observed that the probability of opening of the membrane channel depends on externally applied voltage and the plot is a bell-shaped curve symmetric around probability axis. A scheme of conformational energy levels under varying externally applied voltage was formulated. Assuming that the probability follows Boltzmann distribution, we arrive at an expression of change in energy containing a separate term identical to the energy of a capacitor. This fact indicates the possibility of existence of an added capacitance due to the channel protein. Further it was shown that the aforesaid channel capacitor could be a function of voltage leading to nonlinearity. We have offered a general method of calculating nonlinear capacitance from the experimental data on opening probability of a membrane channel. In case of voltage-dependent anion channel the voltage dependence of the capacitor has a power 0.786. The results have been interpreted in view of the structural organization of the channel protein in the membrane. Our hypothesis is that the phenomenon of capacitor behaviour is a general one for membrane channels.

  13. The decay of highly excited open strings

    Science.gov (United States)

    Mitchell, D.; Turok, N.; Wilkinson, R.; Jetzer, P.

    1988-01-01

    The decay rates of leading edge Regge trajectory states are calculated for very high level number in open bosonic string theories, ignoring tachyon final states. The optical theorem simplifies the analysis while enabling identification of the different mass level decay channels. The main result is that (in four dimensions) the greatest single channel is the emission of a single photon and a state of the next mass level down. A simple asymptotic formula for arbitrarily high level number is given for this process. Also calculated is the total decay rate exactly up to N=100. It shows little variation over this range but appears to decrease for larger N. The formalism is checked in examples and the decay rate of the first excited level calculated for open superstring theories. The calculation may also have implications for high spin meson resonances.

  14. The OpenPlanetary initiative

    Science.gov (United States)

    Manaud, Nicolas; Rossi, Angelo Pio; Hare, Trent; Aye, Michael; Galluzzi, Valentina; van Gasselt, Stephan; Martinez, Santa; McAuliffe, Jonathan; Million, Chase; Nass, Andrea; Zinzi, Angelo

    2016-10-01

    "Open" has become attached to several concepts: science, data, and software are some of the most obvious. It is already common practice within the planetary science community to share spacecraft missions data freely and openly [1]. However, this is not historically the case for software tools, source code, and derived data sets, which are often reproduced independently by multiple individuals and groups. Sharing data, tools and overall knowledge would increase scientific return and benefits [e.g. 2], and recent projects and initiatives are helping toward this goal [e.g. 3,4,5,6].OpenPlanetary is a bottom-up initiative to address the need of the planetary science community for sharing ideas and collaborating on common planetary research and data analysis problems, new challenges, and opportunities. It started from an initial participants effort to stay connected and share information related to and beyond the ESA's first Planetary GIS Workshop [7]. It then continued during the 2nd (US) Planetary Data Workshop [8], and aggregated more people.Our objective is to build an online distributed framework enabling open collaborations within the planetary science community. We aim to co-create, curate and publish resource materials and data sets; to organise online events, to support community-based projects development; and to offer a real-time communication channel at and between conferences and workshops.We will present our current framework and resources, developing projects and ideas, and solicit for feedback and participation. OpenPlanetary is intended for research and education professionals: scientists, engineers, designers, teachers and students, as well as the general public that includes enthusiasts and citizen scientists. All are welcome to join and contribute at openplanetary.co[1] International Planetary Data Alliance, planetarydata.org. [2] Nosek et al (2015), dx.doi.org/10.1126/science.aab2374. [3] Erard S. et al. (2016), EGU2016-17527. [4] Proposal for a PDS

  15. Permeation study of the potassium channel from streptomyces Lividans

    Institute of Scientific and Technical Information of China (English)

    XU Xiuzhi; ZHAN Yong; ZHAO Tongjun

    2004-01-01

    A three-state hopping model is established according to experiments to study permeation of an open-state potassium channel from Streptomyces Lividans (KcsA potassium channel). The master equations are used to characterize the dynamics of the system. In this model, ion conduction involves transitions of three states, with one three-ion state and two two-ion states in the selectivity filter respectively. In equilibrium, the well-known Nernst equation is deduced. It is further shown that the current follows Michaelis-Menten kinetics in steady state. According to the parameters provided by Nelson, the current-voltage relationship is proved to be ohmic and the current-concentration relationship is also obtained reasonably. Additional validation of the model in the characteristic time to reach the steady state for the potassium channel is also discussed. This model lays a possible physical basis for the permeation of ion channel, and opens an avenue for further research.

  16. Introduction: Applying Chemical Biology to Ion Channels.

    Science.gov (United States)

    Pless, Stephan A; Ahern, Christopher A

    2015-01-01

    Ion channels are membrane-spanning proteins that control the flow of ions across biological membranes through an aqueous pathway. The opening or closing of this pore can be controlled by a myriad of physiological inputs (voltage, ligands, temperature, metabolites, pH), which in turn allow for the controlled flux of ions across membranes, resulting in the generation of minute electrical signals. The functional implications of ion channel function on physiological processes are vast. Electrical impulses, in the form of action potentials or diverse chemo-electrical signals, coordinate the syncytium of the heart beat, support a myriad of neuronal communication pathways, insulin secretion, and are central to the immune response, with more roles being discovered virtually everyday. Thus, ion channel function is a biophysical process that is central to biological life at many levels. And with over 500 channel-forming subunits known today in humans, this large class of proteins is also increasingly recognised as important drug targets, as inherited or acquired ion channel dysfunction are known causes of disease.

  17. Openness and growth: Empirical research on the case of Serbia

    Directory of Open Access Journals (Sweden)

    Petrović Predrag

    2012-03-01

    Full Text Available This paper shows the results of research related to the impact of Serbia openness to its economic growth in the period between January 2005 and December 2009. The subject of the research are two potential channels of indirect impact, as follows: (a impact of the openness to economic growth through capital accumulation, and (b impact of the openness to economic growth through total factor productivity growth. The results of this empirical research point out to positive effect of capital accumulation and total factor productivity growth to the economic growth. On the other hand, there is no reliable evidence about any impact of the Serbian economy openness to TFP growth and capital accumulation. Hence, bearing in mind the results obtained in this empirical research, we cannot make a satisfactorily reliable conclusion that openness affects economic growth of Serbia via the aforementioned channels.

  18. Computation over Mismatched Channels

    CERN Document Server

    Karamchandani, Nikhil; Diggavi, Suhas

    2012-01-01

    We consider the problem of distributed computation of a target function over a multiple-access channel. If the target and channel functions are matched (i.e., compute the same function), significant performance gains can be obtained by jointly designing the computation and communication tasks. However, in most situations there is mismatch between these two functions. In this work, we analyze the impact of this mismatch on the performance gains achievable with joint computation and communication designs over separation-based designs. We show that for most pairs of target and channel functions there is no such gain, and separation of computation and communication is optimal.

  19. Channel Access in Erlang

    Energy Technology Data Exchange (ETDEWEB)

    Nicklaus, Dennis J. [Fermilab

    2013-10-13

    We have developed an Erlang language implementation of the Channel Access protocol. Included are low-level functions for encoding and decoding Channel Access protocol network packets as well as higher level functions for monitoring or setting EPICS process variables. This provides access to EPICS process variables for the Fermilab Acnet control system via our Erlang-based front-end architecture without having to interface to C/C++ programs and libraries. Erlang is a functional programming language originally developed for real-time telecommunications applications. Its network programming features and list management functions make it particularly well-suited for the task of managing multiple Channel Access circuits and PV monitors.

  20. Ion channels to inactivate neurons in Drosophila

    Directory of Open Access Journals (Sweden)

    James J L Hodge

    2009-08-01

    Full Text Available Ion channels are the determinants of excitability; therefore, manipulation of their levels and properties provides an opportunity for the investigator to modulate neuronal and circuit function. There are a number of ways to suppress electrical activity in Drosophila neurons, for instance, over-expression of potassium channels (i.e. Shaker Kv1, Shaw Kv3, Kir2.1 and DORK that are open at resting membrane potential. This will result in increased potassium efflux and membrane hyperpolarisation setting resting membrane potential below the threshold required to fire action potentials. Alternatively over-expression of other channels, pumps or co-transporters that result in a hyperpolarised membrane potential will also prevent firing. Lastly, neurons can be inactivated by, disrupting or reducing the level of functional voltage-gated sodium (Nav1 paralytic or calcium (Cav2 cacophony channels that mediate the depolarisation phase of action potentials. Similarly, strategies involving the opposite channel manipulation should allow net depolarisation and hyperexcitation in a given neuron. These changes in ion channel expression can be brought about by the versatile transgenic (i.e. Gal4/UAS based systems available in Drosophila allowing fine temporal and spatial control of (channel transgene expression. These systems are making it possible to electrically inactivate (or hyperexcite any neuron or neural circuit in the fly brain, and much like an exquisite lesion experiment, potentially elucidate whatever interesting behaviour or phenotype each network mediates. These techniques are now being used in Drosophila to reprogram electrical activity of well-defined circuits and bring about robust and easily quantifiable changes in behaviour, allowing different models and hypotheses to be rapidly tested.

  1. State-dependent blocker interactions with the CFTR chloride channel: implications for gating the pore.

    Science.gov (United States)

    Linsdell, Paul

    2014-12-01

    Chloride permeation through the cystic fibrosis transmembrane conductance regulator (CFTR) Cl(-) channel is subject to voltage-dependent open-channel block by a diverse range of cytoplasmic anions. However, in most cases the ability of these blocking substances to influence the pore opening and closing process has not been reported. In the present work, patch clamp recording was used to investigate the state-dependent block of CFTR by cytoplasmic Pt(NO2)4(2-) ions. Two major effects of Pt(NO2)4(2-) were identified. First, this anion caused fast, voltage-dependent block of open channels, leading to an apparent decrease in single-channel current amplitude. Secondly, Pt(NO2)4(2-) also decreased channel open probability due to an increase in interburst closed times. Interestingly, mutations in the pore that weakened (K95Q) or strengthened (I344K, V345K) interactions with Pt(NO2)4(2-) altered blocker effects both on Cl(-) permeation and on channel gating, suggesting that both these effects are a consequence of Pt(NO2)4(2-) interaction with a single site within the pore. Experiments at reduced extracellular Cl(-) concentration hinted that Pt(NO2)4(2-) may have a third effect, possibly increasing channel activity by interfering with channel closure. These results suggest that Pt(NO2)4(2-) can enter from the cytoplasm into the pore inner vestibule of both open and closed CFTR channels, and that Pt(NO2)4(2-) bound in the inner vestibule blocks Cl(-) permeation as well as interfering with channel opening and, perhaps, channel closure. Implications for the location of the channel gate in the pore, and the operation of this gate, are discussed.

  2. Artificial modulation of the gating behavior of a K+ channel in a KvAP-DNA chimera.

    Directory of Open Access Journals (Sweden)

    Andrew Wang

    Full Text Available We present experiments where the gating behavior of a voltage-gated ion channel is modulated by artificial ligand binding. We construct a channel-DNA chimera with the KvAP potassium channel reconstituted in an artificial membrane. The channel is functional and the single channel ion conductivity unperturbed by the presence of the DNA. However, the channel opening probability vs. bias voltage, i.e., the gating, can be shifted considerably by the electrostatic force between the charges on the DNA and the voltage sensing domain of the protein. Different hybridization states of the chimera DNA thus lead to different response curves of the channel.

  3. Reconstitution of highly purified saxitoxin-sensitive Na+-channels into planar lipid bilayers.

    Science.gov (United States)

    Hanke, W; Boheim, G; Barhanin, J; Pauron, D; Lazdunski, M

    1984-03-01

    Highly purified Na+-channels isolated from rat brain have been reconstituted into virtually solvent-free planar lipid bilayer membranes. Two different types of electrically excitable channels were detected in the absence of any neurotoxins. The activity of both channels was blocked by saxitoxin. The first channel type is highly selective for Na+ over K+ (approximately 10:1), it shows a bursting behavior, a conductance of 25 pS in Na+-Ringer and undergoes continuous opening and closing events for periods of minutes within a defined range of negative membranes voltages. The second channel type has a conductance of 150 pS and a lower selectivity for Na+ and K+ (2.2:1); only a few opening and closing events are observed with this channel after one voltage jump. The latter type of channel is also found with highly purified Na+-channel from Electrophorus electricus electroplax. A qualitative analysis of the physicochemical and pharmacological properties of the high conductance channel has been carried out. Channel properties are affected not only by saxitoxin but also by a scorpion (Centruroides suffusus suffusus) toxin and a sea anemone (Anemonia sulcata) toxin both known to be selective for the Na+-channel. The spontaneous transformation of the large conductance channel type into the small one has been considered; the two channel types may represent the expression of activity of different conformational states of the same protein.

  4. Channel Choice: A Literature Review

    DEFF Research Database (Denmark)

    Østergaard Madsen, Christian; Kræmmergaard, Pernille

    2015-01-01

    The channel choice branch of e-government studies citizens’ and businesses’ choice of channels for interacting with government, and how government organizations can integrate channels and migrate users towards the most cost-efficient channels. In spite of the valuable contributions offered no sys...... no systematic overview exist of channel choice. We present a literature review of channel choice studies in government to citizen context identifying authors, countries, methods, concepts, units of analysis, and theories, and offer suggestionsfor future studies....

  5. An Insight to Covert Channels

    OpenAIRE

    Salwan, Nitish; Singh, Sandeep; Arora, Suket; Singh, Amarpreet

    2013-01-01

    This paper presents an overview of different concepts regarding covert channels. It discusses the various classifications and the detailing of various fields used to manipulate for the covert channel execution.Different evaluation criterias are presented for measuring the strength of covert channels. The defenses and prevention schemes for this covert channel will also be discussed. This paper also discuss about an advanced timing channel i.e.Temperature Based Covert Channel.

  6. Test of the Bank Lending Channel: The Case of Poland

    Directory of Open Access Journals (Sweden)

    Yu HSING

    2013-11-01

    Full Text Available This paper tests the bank lending channel for Poland based on a simultaneousequation model consisting of demand for and supply of bank loans. The three-stage least squares method is employed in empirical work. This paper finds support for a bank lending channel for Poland. Expansionary monetary policy through a lower money market rate or open market purchase of government bonds to increase bank reserves/deposits would increase bank loan supply.

  7. Stratigraphy and Evolution of Delta Channel Deposits, Jezero Crater, Mars

    Science.gov (United States)

    Goudge, T. A.; Mohrig, D.; Cardenas, B. T.; Hughes, C. M.; Fassett, C. I.

    2017-01-01

    The Jezero impact crater hosted an open-basin lake that was active during the valley network forming era on early Mars. This basin contains a well exposed delta deposit at the mouth of the western inlet valley. The fluvial stratigraphy of this deposit provides a record of the channels that built the delta over time. Here we describe observations of the stratigraphy of the channel deposits of the Jezero western delta to help reconstruct its evolution.

  8. Macroscopic kinetics of pentameric ligand gated ion channels: comparisons between two prokaryotic channels and one eukaryotic channel.

    Science.gov (United States)

    Laha, Kurt T; Ghosh, Borna; Czajkowski, Cynthia

    2013-01-01

    Electrochemical signaling in the brain depends on pentameric ligand-gated ion channels (pLGICs). Recently, crystal structures of prokaryotic pLGIC homologues from Erwinia chrysanthemi (ELIC) and Gloeobacter violaceus (GLIC) in presumed closed and open channel states have been solved, which provide insight into the structural mechanisms underlying channel activation. Although structural studies involving both ELIC and GLIC have become numerous, thorough functional characterizations of these channels are still needed to establish a reliable foundation for comparing kinetic properties. Here, we examined the kinetics of ELIC and GLIC current activation, desensitization, and deactivation and compared them to the GABAA receptor, a prototypic eukaryotic pLGIC. Outside-out patch-clamp recordings were performed with HEK-293T cells expressing ELIC, GLIC, or α1β2γ2L GABAA receptors, and ultra-fast ligand application was used. In response to saturating agonist concentrations, we found both ELIC and GLIC current activation were two to three orders of magnitude slower than GABAA receptor current activation. The prokaryotic channels also had slower current desensitization on a timescale of seconds. ELIC and GLIC current deactivation following 25 s pulses of agonist (cysteamine and pH 4.0 buffer, respectively) were relatively fast with time constants of 24.9 ± 5.1 ms and 1.2 ± 0.2 ms, respectively. Surprisingly, ELIC currents evoked by GABA activated very slowly with a time constant of 1.3 ± 0.3 s and deactivated even slower with a time constant of 4.6 ± 1.2 s. We conclude that the prokaryotic pLGICs undergo similar agonist-mediated gating transitions to open and desensitized states as eukaryotic pLGICs, supporting their use as experimental models. Their uncharacteristic slow activation, slow desensitization and rapid deactivation time courses are likely due to differences in specific structural elements, whose future identification may help uncover mechanisms underlying p

  9. Regulation of BK channels by auxiliary γ subunits

    Directory of Open Access Journals (Sweden)

    Jiyuan eZhang

    2014-10-01

    Full Text Available The large-conductance, calcium- and voltage-activated potassium (BK channel has the largest single-channel conductance among potassium channels and can be activated by both membrane depolarization and increases in intracellular calcium concentration. BK channels consist of pore-forming, voltage- and calcium-sensing α subunits, either alone or in association with regulatory subunits. BK channels are widely expressed in various tissues and cells including both excitable and non-excitable cells and display diverse biophysical and pharmacological characteristics. This diversity can be explained in part by posttranslational modifications and alternative splicing of the α subunit, which is encoded by a single gene, KCNMA1, as well as by tissue-specific β subunit modulation. Recently, a leucine-rich repeat-containing membrane protein, LRRC26, was found to interact with BK channels and cause an unprecedented large negative shift (~-140 mV in the voltage dependence of the BK channel activation. LRRC26 allows BK channels to open even at near-physiological calcium concentration and membrane voltage in non-excitable cells. Three LRRC26-related proteins, LRRC52, LRRC55, and LRRC38, were subsequently identified as BK channel modulators. These LRRC proteins are structurally and functionally distinct from the BK channel β subunits and were designated as γ subunits. The discovery of the γ subunits adds a new dimension to BK channel regulation and improves our understanding of the physiological functions of BK channels in various tissues and cell types. Unlike BK channel β subunits, which have been intensively investigated both mechanistically and physiologically, our understanding of the γ subunits is very limited at this stage. This article reviews the structure, modulatory mechanisms, physiological relevance, and potential therapeutic implications of γ subunits as they are currently understood.

  10. Single-cell census of mechanosensitive channels in living bacteria.

    Directory of Open Access Journals (Sweden)

    Maja Bialecka-Fornal

    Full Text Available Bacteria are subjected to a host of different environmental stresses. One such insult occurs when cells encounter changes in the osmolarity of the surrounding media resulting in an osmotic shock. In recent years, a great deal has been learned about mechanosensitive (MS channels which are thought to provide osmoprotection in these circumstances by opening emergency release valves in response to membrane tension. However, even the most elementary physiological parameters such as the number of MS channels per cell, how MS channel expression levels influence the physiological response of the cells, and how this mean number of channels varies from cell to cell remain unanswered. In this paper, we make a detailed quantitative study of the expression of the mechanosensitive channel of large conductance (MscL in different media and at various stages in the growth history of bacterial cultures. Using both quantitative fluorescence microscopy and quantitative Western blots our study complements earlier electrophysiology-based estimates and results in the following key insights: i the mean number of channels per cell is much higher than previously estimated, ii measurement of the single-cell distributions of such channels reveals marked variability from cell to cell and iii the mean number of channels varies under different environmental conditions. The regulation of MscL expression displays rich behaviors that depend strongly on culturing conditions and stress factors, which may give clues to the physiological role of MscL. The number of stress-induced MscL channels and the associated variability have far reaching implications for the in vivo response of the channels and for modeling of this response. As shown by numerous biophysical models, both the number of such channels and their variability can impact many physiological processes including osmoprotection, channel gating probability, and channel clustering.

  11. Cooperative gating between ion channels.

    Science.gov (United States)

    Choi, Kee-Hyun

    2014-01-01

    Cooperative gating between ion channels, i.e. the gating of one channel directly coupled to the gating of neighboring channels, has been observed in diverse channel types at the single-channel level. Positively coupled gating could enhance channel-mediated signaling while negative coupling may effectively reduce channel gating noise. Indeed, the physiological significance of cooperative channel gating in signal transduction has been recognized in several in vivo studies. Moreover, coupled gating of ion channels was reported to be associated with some human disease states. In this review, physiological roles for channel cooperativity and channel clustering observed in vitro and in vivo are introduced, and stimulation-induced channel clustering and direct channel cross linking are suggested as the physical mechanisms of channel assembly. Along with physical clustering, several molecular mechanisms proposed as the molecular basis for functional coupling of neighboring channels are covered: permeant ions as a channel coupling mediator, concerted channel activation through the membrane, and allosteric mechanisms. Also, single-channel analysis methods for cooperative gating such as the binomial analysis, the variance analysis, the conditional dwell time density analysis, and the maximum likelihood fitting analysis are reviewed and discussed.

  12. Cloning and expression of a FMRFamide-gated Na+ channel from Helisoma trivolvis and comparison with the native neuronal channel

    Science.gov (United States)

    Jeziorski, Michael C; Green, Kevin A; Sommerville, John; Cottrell, Glen A

    2000-01-01

    We have cloned a cDNA encoding a Phe-Met-Arg-Phe-NH2 (FMRFamide)-gated Na+ channel from nervous tissue of the pond snail Helisoma trivolvis (HtFaNaC) and expressed the channel in Xenopus oocytes. The deduced amino acid sequence of the protein expressed by HtFaNaC is 65 % identical to that of the FMRFamide-gated channel cloned from Helix aspersa (HaFaNaC). HtFaNaC expressed in oocytes was less sensitive to FMRFamide (EC50 = 70 μM) than HaFaNaC (EC50 = 2 μM). The two had a similar selectivity for Na+. The amplitude of the FMRFamide response of HtFaNaC was increased by reducing the extracellular concentration of divalent cations. The conductance of the two channels was similar, but the mean open time of unitary events was shorter for expressed HtFaNaC compared to expressed HaFaNaC. Each channel was susceptible to peptide block by high agonist concentrations. In marked contrast to HaFaNaC and other amiloride-sensitive Na+ channels, amiloride, and the related drugs benzamil and 5-(N-ethyl-N-isopropyl)-amiloride (EIPA), enhanced the FMRFamide response in oocytes expressing HtFaNaC cRNA. The potentiating effects of EIPA and benzamil were greater than those of amiloride. Unitary current analysis showed that with such drugs, there was channel blockade as well as an increased probability of channel opening. The similar permeability of the oocyte-expressed HtFaNaC and the Helisoma neuronal channel, and the susceptibility of both to agonist blockade and blockade by divalent cations, suggest that the channels are the same. However, neuronal channels were less susceptible to enhancement by amiloride analogues and in some patches were more sensitive to FMRFamide than expressed HtFaNaC. PMID:10878095

  13. Channelized Streams in Iowa

    Data.gov (United States)

    Iowa State University GIS Support and Research Facility — This draft dataset consists of all ditches or channelized pieces of stream that could be identified using three input datasets; namely the1:24,000 National...

  14. Covert Channels within IRC

    Science.gov (United States)

    2011-03-24

    Communications ....................................... 2 1.3 Steganography and Covert Channels .......................................................... 3...Internet Relay Chat ..................................................................................... 7 2.2 Steganography ...13 2.2.2 Encrypted Steganographic Systems .............................................. 15 2.2.3 Text-Based Steganography

  15. 28-Channel rotary transformer

    Science.gov (United States)

    Mclyman, W. T.

    1981-01-01

    Transformer transmits power and digital data across rotating interface. Array has many parallel data channels, each with potential l megabaud data rate. Ferrite-cored transformers are spaced along rotor; airgap between them reduces crosstalk.

  16. Calcium channel blocker poisoning

    Directory of Open Access Journals (Sweden)

    Miran Brvar

    2005-04-01

    Full Text Available Background: Calcium channel blockers act at L-type calcium channels in cardiac and vascular smooth muscles by preventing calcium influx into cells with resultant decrease in vascular tone and cardiac inotropy, chronotropy and dromotropy. Poisoning with calcium channel blockers results in reduced cardiac output, bradycardia, atrioventricular block, hypotension and shock. The findings of hypotension and bradycardia should suggest poisoning with calcium channel blockers.Conclusions: Treatment includes immediate gastric lavage and whole-bowel irrigation in case of ingestion of sustainedrelease products. All patients should receive an activated charcoal orally. Specific treatment includes calcium, glucagone and insulin, which proved especially useful in shocked patients. Supportive care including the use of catecholamines is not always effective. In the setting of failure of pharmacological therapy transvenous pacing, balloon pump and cardiopulmonary by-pass may be necessary.

  17. Volume Regulated Channels

    DEFF Research Database (Denmark)

    Klausen, Thomas Kjær

    - serves a multitude of functions in the mammalian cell, regulating the membrane potential (Em), cell volume, protein activity and the driving force for facilitated transporters giving Cl- and Cl- channels a major potential of regulating cellular function. These functions include control of the cell cycle...... of volume perturbations evolution have developed system of channels and transporters to tightly control volume homeostasis. In the past decades evidence has been mounting, that the importance of these volume regulated channels and transporters are not restricted to the defense of cellular volume......, controlled cell death and cellular migration. Volume regulatory mechanisms has long been in focus for regulating cellular proliferation and my thesis work have been focusing on the role of Cl- channels in proliferation with specific emphasis on ICl, swell. Pharmacological blockage of the ubiquitously...

  18. Authentication over Noisy Channels

    CERN Document Server

    Lai, Lifeng; Poor, H Vincent

    2008-01-01

    In this work, message authentication over noisy channels is studied. The model developed in this paper is the authentication theory counterpart of Wyner's wiretap channel model. Two types of opponent attacks, namely impersonation attacks and substitution attacks, are investigated for both single message and multiple message authentication scenarios. For each scenario, information theoretic lower and upper bounds on the opponent's success probability are derived. Remarkably, in both scenarios, lower and upper bounds are shown to match, and hence the fundamental limit of message authentication over noisy channels is fully characterized. The opponent's success probability is further shown to be smaller than that derived in the classic authentication model in which the channel is assumed to be noiseless. These results rely on a proposed novel authentication scheme in which key information is used to provide simultaneous protection again both types of attacks.

  19. Coding for optical channels

    CERN Document Server

    Djordjevic, Ivan; Vasic, Bane

    2010-01-01

    This unique book provides a coherent and comprehensive introduction to the fundamentals of optical communications, signal processing and coding for optical channels. It is the first to integrate the fundamentals of coding theory and optical communication.

  20. Cl- channels in apoptosis

    DEFF Research Database (Denmark)

    Wanitchakool, Podchanart; Ousingsawat, Jiraporn; Sirianant, Lalida

    2016-01-01

    , and cystic fibrosis transmembrane conductance regulator (CFTR) in cellular apoptosis. LRRC8A-E has been identified as a volume-regulated anion channel expressed in many cell types. It was shown to be required for regulatory and apoptotic volume decrease (RVD, AVD) in cultured cell lines. Its presence also......(-) channels or as regulators of other apoptotic Cl(-) channels, such as LRRC8. CFTR has been known for its proapoptotic effects for some time, and this effect may be based on glutathione release from the cell and increase in cytosolic reactive oxygen species (ROS). Although we find that CFTR is activated...... by cell swelling, it is possible that CFTR serves RVD/AVD through accumulation of ROS and activation of independent membrane channels such as ANO6. Thus activation of ANO6 will support cell shrinkage and induce additional apoptotic events, such as membrane phospholipid scrambling....

  1. Sensing with Ion Channels

    CERN Document Server

    Martinac, Boris

    2008-01-01

    All living cells are able to detect and translate environmental stimuli into biologically meaningful signals. Sensations of touch, hearing, sight, taste, smell or pain are essential to the survival of all living organisms. The importance of sensory input for the existence of life thus justifies the effort made to understand its molecular origins. Sensing with Ion Channels focuses on ion channels as key molecules enabling biological systems to sense and process the physical and chemical stimuli that act upon cells in their living environment. Its aim is to serve as a reference to ion channel specialists and as a source of new information to non specialists who want to learn about the structural and functional diversity of ion channels and their role in sensory physiology.

  2. Scheme of Pressure Boost and Floating Aid for Steel Open Caisson of Main Ship Channel Bridge of Hutong Changjiang River Bridge%沪通长江大桥主航道桥钢沉井增压助浮方案

    Institute of Scientific and Technical Information of China (English)

    余允锋; 邱琼海; 王立忠

    2015-01-01

    The main ship channel bridge of the Hutong Changjiang River Bridge is a double-py-lon continuous steel truss girder cable-stayed bridge with span arrangement (140+462+1 092+462+140) m .T he foundations for the main piers of the bridge are all the open caissons ,of w hich the plan dimensions of the caisson top of the main pier No .29 are 86 .9 m × 58 .7 m and in the plan of the caisson ,24 well holes are arranged .The total height of the caisson of the pier is 115 m and the lower part of the caisson is the steel caisson that is 56 m in height .In the state of free floating , the draught of the steel caisson is 12 .5 m ,the caisson can not be floated out of the shipyard be-cause of the deep draught and has the risk of grounding in the floating .To reduce the draught of the caisson and to keep the pressure in the air cabins of the caisson stable ,the scheme of pressure boost and floating aid for the caisson was proposed ,that was ,12 well holes in the caisson were symmetrically closed to make the well holes the sealed cabins .Meanwhile ,the active pressure boost system was arranged and the air was injected into the cabins from the tops of the closing cov-er plates of the well holes .The pressure boost system was composed of the air compressor ,main air pipes ,branch air pipes ,extension air pipes ,air pressure meters ,check valves ,stop valves and liquid level sensors .By the measures of injecting the air for pressure boost and releasing the air for pressure reduction ,the air pressure in each cabin was controlled .With the scheme of the pressure boost and floating aid ,the steel open caisson of the pier was finally floated out from the shipyard to the pier site only in 3 h and the effect of the scheme implementation was sound .%沪通长江大桥主航道桥为(140+462+1 092+462+140 ) m双塔连续钢桁梁斜拉桥 ,该桥主墩均采用沉井基础 ,其中 ,29号主墩沉井顶平面尺寸为86 .9 m × 58 .7 m ,平面布置24个井孔 ,高115m,下部钢沉井高56

  3. Advanced porous electrodes with flow channels for vanadium redox flow battery

    Science.gov (United States)

    Bhattarai, Arjun; Wai, Nyunt; Schweiss, Ruediger; Whitehead, Adam; Lim, Tuti M.; Hng, Huey Hoon

    2017-02-01

    Improving the overall energy efficiency by reducing pumping power and improving flow distribution of electrolyte, is a major challenge for developers of flow batteries. The use of suitable channels can improve flow distribution through the electrodes and reduce flow resistance, hence reducing the energy consumption of the pumps. Although several studies of vanadium redox flow battery have proposed the use of bipolar plates with flow channels, similar to fuel cell designs, this paper presents the use of flow channels in the porous electrode as an alternative approach. Four types of electrodes with channels: rectangular open channel, interdigitated open cut channel, interdigitated circular poked channel and cross poked circular channels, are studied and compared with a conventional electrode without channels. Our study shows that interdigitated open channels can improve the overall energy efficiency up to 2.7% due to improvement in flow distribution and pump power reduction while interdigitated poked channel can improve up to 2.5% due to improvement in flow distribution.

  4. Open Payments Data

    Data.gov (United States)

    U.S. Department of Health & Human Services — Open Payments (otherwise known as the Sunshine Act) - Open Payments is a Congressionally-mandated transparency program that increases awareness of financial...

  5. Open Payments Data

    Data.gov (United States)

    U.S. Department of Health & Human Services — Open Payments (otherwise known as the Sunshine Act) - Open Payments is a Congressionally-mandated transparency program that increases awareness of financial...

  6. OpenCities Project

    Data.gov (United States)

    US Agency for International Development — The Open Cities Project aims to catalyze the creation, management and use of open data to produce innovative solutions for urban planning and resilience challenges...

  7. Chloride channels in stroke

    Institute of Scientific and Technical Information of China (English)

    Ya-ping ZHANG; Hao ZHANG; Dayue Darrel DUAN

    2013-01-01

    Vascular remodeling of cerebral arterioles,including proliferation,migration,and apoptosis of vascular smooth muscle cells (VSMCs),is the major cause of changes in the cross-sectional area and diameter of the arteries and sudden interruption of blood flow or hemorrhage in the brain,ie,stroke.Accumulating evidence strongly supports an important role for chloride (Clˉ) channels in vascular remodeling and stroke.At least three Clˉ channel genes are expressed in VSMCs:1) the TMEM16A (or Ano1),which may encode the calcium-activated Clˉ channels (CACCs); 2) the CLC-3 Clˉ channel and Clˉ/H+ antiporter,which is closely related to the volume-regulated Clˉ channels (VRCCs); and 3) the cystic fibrosis transmembrane conductance regulator (CFTR),which encodes the PKA-and PKC-activated Clˉ channels.Activation of the CACCs by agonist-induced increase in intracellular Ca2+ causes membrane depolarization,vasoconstriction,and inhibition of VSMC proliferation.Activation of VRCCs by cell volume increase or membrane stretch promotes the production of reactive oxygen species,induces proliferation and inhibits apoptosis of VSMCs.Activation of CFTR inhibits oxidative stress and may prevent the development of hypertension.In addition,Clˉ current mediated by gammaaminobutyric acid (GABA) receptor has also been implicated a role in ischemic neuron death.This review focuses on the functional roles of Clˉ channels in the development of stroke and provides a perspective on the future directions for research and the potential to develop Clˉ channels as new targets for the prevention and treatment of stroke.

  8. Open Hardware Business Models

    Directory of Open Access Journals (Sweden)

    Edy Ferreira

    2008-04-01

    Full Text Available In the September issue of the Open Source Business Resource, Patrick McNamara, president of the Open Hardware Foundation, gave a comprehensive introduction to the concept of open hardware, including some insights about the potential benefits for both companies and users. In this article, we present the topic from a different perspective, providing a classification of market offers from companies that are making money with open hardware.

  9. EFFECT OF MULTIPATH CHANNEL MODELS TO THE RECOVERY ALGORITHMS ON COMPRESSED SENSING IN UWB CHANNEL ESTIMATION

    Institute of Scientific and Technical Information of China (English)

    Nguyen ThanhSon; Guo Shuxu; Chen Haipeng

    2013-01-01

    Multipath arrivals in an Ultra-WideBand (UWB) channel have a long time intervals between clusters and rays where the signal takes on zero or negligible values.It is precisely the signal sparsity of the impulse response of the UWB channel that is exploited in this work aiming at UWB channel estimation based on Compressed Sensing (CS).However,these multipath arrivals mainly depend on the channel environments that generate different sparse levels (low-sparse or high-sparse) of the UWB channels.According to this basis,we have analyzed the two most basic recovery algorithms,one based on linear programming Basis Pursuit (BP),another using greedy method Orthogonal Matching Pursuit (OMP),and chosen the best recovery algorithm which are suitable to the sparse level for each type of channel environment.Besides,the results of this work is an open topic for further research aimed at creating a optimal algorithm specially for application of CS based UWB systems.

  10. Fracture channel waves

    Science.gov (United States)

    Nihei, Kurt T.; Yi, Weidong; Myer, Larry R.; Cook, Neville G. W.; Schoenberg, Michael

    1999-03-01

    The properties of guided waves which propagate between two parallel fractures are examined. Plane wave analysis is used to obtain a dispersion equation for the velocities of fracture channel waves. Analysis of this equation demonstrates that parallel fractures form an elastic waveguide that supports two symmetric and two antisymmetric dispersive Rayleigh channel waves, each with particle motions and velocities that are sensitive to the normal and tangential stiffnesses of the fractures. These fracture channel waves degenerate to shear waves when the fracture stiffnesses are large, to Rayleigh waves and Rayleigh-Lamb plate waves when the fracture stiffnesses are low, and to fracture interface waves when the fractures are either very closely spaced or widely separated. For intermediate fracture stiffnesses typical of fractured rock masses, fracture channel waves are dispersive and exhibit moderate to strong localization of guided wave energy between the fractures. The existence of these waves is examined using laboratory acoustic measurements on a fractured marble plate. This experiment confirms the distinct particle motion of the fundamental antisymmetric fracture channel wave (A0 mode) and demonstrates the ease with which a fracture channel wave can be generated and detected.

  11. Effect of Flow Channel Shape on Performance in Reverse Electrodialysis

    Energy Technology Data Exchange (ETDEWEB)

    Kwon, Kilsung [Korea Atomic Energy Research Institute, Daejeon (Korea, Republic of); Kim, Deok Han; Kim, Daejoong [Sogang Univ., Seoul (Korea, Republic of)

    2017-05-15

    Reverse electrodialysis (RED), which generates electrical energy from the difference in concentration of two solutions, has been actively studied owing to its high potential and the increased interest in renewable energy resulting from the Paris Agreement on climate change. For RED commercialization, its power density needs to be maximized, and therefore various methods have been discussed. In this paper, the power density was measured using various flow shapes based on the aspect ratio, opening ratio, and number of distribution channels. We found that the power density is enhanced with a decrease in the aspect ratio and an increase in the opening ratio and number of distribution channels.

  12. Open Source Business Solutions

    Directory of Open Access Journals (Sweden)

    Ion IVAN

    2008-01-01

    Full Text Available This analyses the Open source movement. Open source development process and management is seen different from the classical point of view. This focuses on characteristics and software market tendencies for the main Open source initiatives. It also points out the labor market future evolution for the software developers.

  13. OpenFlow cookbook

    CERN Document Server

    Smiler S, Kingston

    2015-01-01

    This book is intended for network protocol developers, SDN controller application developers, and academics who would like to understand and develop their own OpenFlow switch or OpenFlow controller in any programming language. With basic understanding of OpenFlow and its components, you will be able to follow the recipes in this book.

  14. Open Rotor Development

    Science.gov (United States)

    Van Zante, Dale E.; Rizzi, Stephen A.

    2016-01-01

    The ERA project executed a comprehensive test program for Open Rotor aerodynamic and acoustic performance. System studies used the data to estimate the fuel burn savings and acoustic margin for an aircraft system with open rotor propulsion. The acoustic measurements were used to produce an auralization that compares the legacy blades to the current generation of open rotor designs.

  15. Openness as infrastructure

    Directory of Open Access Journals (Sweden)

    Wilbanks John

    2011-10-01

    Full Text Available Abstract The advent of open access to peer reviewed scholarly literature in the biomedical sciences creates the opening to examine scholarship in general, and chemistry in particular, to see where and how novel forms of network technology can accelerate the scientific method. This paper examines broad trends in information access and openness with an eye towards their applications in chemistry.

  16. Gating-by-Tilt of Mechanically Sensitive Membrane Channels

    Science.gov (United States)

    Turner, Matthew S.; Sens, Pierre

    2004-09-01

    We propose an alternative mechanism for the gating of biological membrane channels in response to membrane tension that involves a change in the slope of the membrane near the channel. Under biological membrane tensions we show that the energy difference between the closed (tilted) and open (untilted) states can far exceed kBT and is comparable to what is available under simple dilational gating. Recent experiments demonstrate that membrane leaflet asymmetries (spontaneous curvature) can strongly affect the gating of some channels. Such a phenomenon would be easier to explain under gating-by-tilt, given its novel intrinsic sensitivity to such asymmetry.

  17. Inequalities and Separations Among Assisted Capacities of Quantum Channels

    Science.gov (United States)

    Bennett, Charles H.; Devetak, Igor; Shor, Peter W.; Smolin, John A.

    2006-04-01

    We exhibit quantum channels whose classical and quantum capacities, when assisted by classical feedback, exceed their unassisted classical Holevo capacity. These channels are designed to be noisy in a way that can be corrected with the help of the output and a reference system entangled with part of the input. A similar construction yields quantum channels whose classical capacity, when assisted by two-way classical communication independent of the source, exceeds their classical capacity assisted by feedback alone. We give a hierarchy of capacity inequalities and open questions.

  18. Acoustic resonance phenomena in air bleed channels in aviation engines

    Science.gov (United States)

    Aleksentsev, A. A.; Sazhenkov, A. N.; Sukhinin, S. V.

    2016-11-01

    The existence of axial-radial acoustic resonance oscillations of the basic air flow in bleed channels of aviation engines is demonstrated theoretically and experimentally. Numerical and analytical methods are used to determine the frequency of acoustic resonance oscillations for the lowest modes of open and closed bleed channels of the PS-90A engine. Experimental investigations reveal new acoustic resonance phenomena arising in the air flow in bleed channel cavities in the core duct of this engine owing to instability of the basic air flow. The results of numerical, analytical, and experimental studies of the resonance frequencies reached in the flow in bleed channel cavities in the core duct of the PS-90A engine are found to be in reasonable agreement. As a result, various types of resonance oscillations in bleed channels can be accurately described.

  19. Optogenetics. Engineering of a light-gated potassium channel.

    Science.gov (United States)

    Cosentino, Cristian; Alberio, Laura; Gazzarrini, Sabrina; Aquila, Marco; Romano, Edoardo; Cermenati, Solei; Zuccolini, Paolo; Petersen, Jan; Beltrame, Monica; Van Etten, James L; Christie, John M; Thiel, Gerhard; Moroni, Anna

    2015-05-01

    The present palette of opsin-based optogenetic tools lacks a light-gated potassium (K(+)) channel desirable for silencing of excitable cells. Here, we describe the construction of a blue-light-induced K(+) channel 1 (BLINK1) engineered by fusing the plant LOV2-Jα photosensory module to the small viral K(+) channel Kcv. BLINK1 exhibits biophysical features of Kcv, including K(+) selectivity and high single-channel conductance but reversibly photoactivates in blue light. Opening of BLINK1 channels hyperpolarizes the cell to the K(+) equilibrium potential. Ectopic expression of BLINK1 reversibly inhibits the escape response in light-exposed zebrafish larvae. BLINK1 therefore provides a single-component optogenetic tool that can establish prolonged, physiological hyperpolarization of cells at low light intensities.

  20. Structural mechanism of C-type inactivation in K+ channels

    Science.gov (United States)

    Cuello, Luis G.; Jogini, Vishwanath; Cortes, D. Marien; Perozo, Eduardo

    2011-01-01

    Interconversion between conductive and non-conductive forms of the K+ channel selectivity filter underlies a variety of gating events, from flicker transitions (μs) to C-type inactivation (ms-s). Here, we report the crystal structure of the K+ channel KcsA in its Open-Inactivated conformation and investigate the mechanism of C-type inactivation gating at the selectivity filter from channels “trapped” in a series of partially open conformations. Five conformer classes were identified with openings ranging, from 12 Å in closed KcsA (Cα-Cα distances at T112) to 32 Å when fully open. They revealed a remarkable correlation between the degree of gate opening and the conformation and ion occupancy of the selectivity filter. We show that a gradual filter backbone reorientation leads first, to a loss of the S2 ion binding site and a subsequent loss of the S3 binding site, presumably abrogating ion conduction. These structures suggest a molecular basis for C-type inactivation in K+ channels. PMID:20613835