Light intensity modulates the response of two Antarctic diatom species to ocean acidification

Directory of Open Access Journals (Sweden)

Jasmin Pascale Heiden

2016-12-01

Full Text Available It is largely unknown how rising atmospheric CO2 concentrations and changes in the upper mixed layer depth, with its subsequent effects on light availability will affect phytoplankton physiology in the Southern Ocean. Linking seasonal variations in the availability of CO2 and light to abundances and physiological traits of key phytoplankton species could aid to understand their abilities to acclimate to predicted future climatic conditions. To investigate the combined effects of CO2 and light on two ecologically relevant Antarctic diatoms (Fragilariopsis curta and Odontella weisflogii a matrix of three light intensities (LL=20, ML=200, HL=500 µmol photons m-2 s-1 and three pCO2 levels (low=180, ambient=380, high=1000 µatm was applied assessing their effects on growth, particulate organic carbon (POC fixation and photophysiology. Under ambient pCO2, POC production rates were highest already at low light in Fragilariopsis, indicating saturation of photosynthesis, while in Odontella highest rates were only reached at medium irradiances. In both species ocean acidification did not stimulate, but rather inhibited, growth and POC production under low and medium light. This effect was, however, amended under high growth irradiances. Low pCO2 levels inhibited growth and POC production in both species at low and medium light, and further decreased absETRs under high light. Our results suggest that Southern Ocean diatoms were sensitive to changes in pCO2, showing species-specific responses, which were further modulated by light intensity. The two diatom species represent distinct ecotypes and revealed discrete physiological traits that matched their seasonal occurrence with the related physical conditions in Antarctic coastal waters.

Poles Apart: The “Bipolar” Pteropod Species Limacina helicina Is Genetically Distinct Between the Arctic and Antarctic Oceans

Science.gov (United States)

Bednarsek, Nina; Linse, Katrin; Nelson, R. John; Pakhomov, Evgeny; Seibel, Brad; Steinke, Dirk; Würzberg, Laura

2010-01-01

The shelled pteropod (sea butterfly) Limacina helicina is currently recognised as a species complex comprising two sub-species and at least five “forma”. However, at the species level it is considered to be bipolar, occurring in both the Arctic and Antarctic oceans. Due to its aragonite shell and polar distribution L. helicina is particularly vulnerable to ocean acidification. As a key indicator of the acidification process, and a major component of polar ecosystems, L. helicina has become a focus for acidification research. New observations that taxonomic groups may respond quite differently to acidification prompted us to reassess the taxonomic status of this important species. We found a 33.56% (±0.09) difference in cytochrome c oxidase subunit I (COI) gene sequences between L. helicina collected from the Arctic and Antarctic oceans. This degree of separation is sufficient for ordinal level taxonomic separation in other organisms and provides strong evidence for the Arctic and Antarctic populations of L. helicina differing at least at the species level. Recent research has highlighted substantial physiological differences between the poles for another supposedly bipolar pteropod species, Clione limacina. Given the large genetic divergence between Arctic and Antarctic L. helicina populations shown here, similarly large physiological differences may exist between the poles for the L. helicina species group. Therefore, in addition to indicating that L. helicina is in fact not bipolar, our study demonstrates the need for acidification research to take into account the possibility that the L. helicina species group may not respond in the same way to ocean acidification in Arctic and Antarctic ecosystems. PMID:20360985

Ocean acidification alters the otoliths of a pantropical fish species with implications for sensory function.

Science.gov (United States)

Bignami, Sean; Enochs, Ian C; Manzello, Derek P; Sponaugle, Su; Cowen, Robert K

2013-04-30

Ocean acidification affects a wide diversity of marine organisms and is of particular concern for vulnerable larval stages critical to population replenishment and connectivity. Whereas it is well known that ocean acidification will negatively affect a range of calcareous taxa, the study of fishes is more limited in both depth of understanding and diversity of study species. We used new 3D microcomputed tomography to conduct in situ analysis of the impact of ocean acidification on otolith (ear stone) size and density of larval cobia (Rachycentron canadum), a large, economically important, pantropical fish species that shares many life history traits with a diversity of high-value, tropical pelagic fishes. We show that 2,100 μatm partial pressure of carbon dioxide (pCO2) significantly increased not only otolith size (up to 49% greater volume and 58% greater relative mass) but also otolith density (6% higher). Estimated relative mass in 800 μatm pCO2 treatments was 14% greater, and there was a similar but nonsignificant trend for otolith size. Using a modeling approach, we demonstrate that these changes could affect auditory sensitivity including a ∼50% increase in hearing range at 2,100 μatm pCO2, which may alter the perception of auditory information by larval cobia in a high-CO2 ocean. Our results indicate that ocean acidification has a graded effect on cobia otoliths, with the potential to substantially influence the dispersal, survival, and recruitment of a pelagic fish species. These results have important implications for population maintenance/replenishment, connectivity, and conservation efforts for other valuable fish stocks that are already being deleteriously impacted by overfishing.

Two new species of Protomyctophum (Pisces, Teleostei, Myctophidae) from the Southern Ocean

NARCIS (Netherlands)

Prokofiev, Artém M.

2004-01-01

Two new species of the genus Protomyctophum from the Southern Ocean are described. P. mcginnisi n. sp. (from off the Southern Shetland Islands) is most closely related to P. bolini (Fraser-Brunner, 1949), from which it differs in photophore arrangement, in metallic shine of the photophores, and in

Incorporating climate and ocean change into extinction risk assessments for 82 coral species.

Science.gov (United States)

Brainard, Russell E; Weijerman, Mariska; Eakin, C Mark; McElhany, Paul; Miller, Margaret W; Patterson, Matt; Piniak, Gregory A; Dunlap, Matthew J; Birkeland, Charles

2013-12-01

Many marine invertebrate species facing potential extinction have uncertain taxonomies and poorly known demographic and ecological traits. Uncertainties are compounded when potential extinction drivers are climate and ocean changes whose effects on even widespread and abundant species are only partially understood. The U.S. Endangered Species Act mandates conservation management decisions founded on the extinction risk to species based on the best available science at the time of consideration-requiring prompt action rather than awaiting better information. We developed an expert-opinion threat-based approach that entails a structured voting system to assess extinction risk from climate and ocean changes and other threats to 82 coral species for which population status and threat response information was limited. Such methods are urgently needed because constrained budgets and manpower will continue to hinder the availability of desired data for many potentially vulnerable marine species. Significant species-specific information gaps and uncertainties precluded quantitative assessments of habitat loss or population declines and necessitated increased reliance on demographic characteristics and threat vulnerabilities at genus or family levels. Adapting some methods (e.g., a structured voting system) used during other assessments and developing some new approaches (e.g., integrated assessment of threats and demographic characteristics), we rated the importance of threats contributing to coral extinction risk and assessed those threats against population status and trend information to evaluate each species' extinction risk over the 21st century. This qualitative assessment resulted in a ranking with an uncertainty range for each species according to their estimated likelihood of extinction. We offer guidance on approaches for future biological extinction risk assessments, especially in cases of data-limited species likely to be affected by global-scale threats

Species richness and distribution patterns of echinoderms in the southwestern Atlantic Ocean (34-56°S

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Valeria Souto

2014-06-01

Full Text Available The aim of this study was to compile and analyse available historical information on echinoderms in the southwestern Atlantic Ocean in order to make a synthesis of present taxonomical knowledge, to identify patterns of geographical distribution of echinoderm assemblages and to test the validity of the current zoogeographic scheme for this group. This study was conducted on the Argentinean continental shelf, southwestern Atlantic Ocean (34-56°S. An intensive research on geo-referenced data was carried out to make a knowledge synthesis on echinoderm species and thus create a historical database. Multivariate analysis was used to analyse the faunal composition through latitudinal and bathymetric gradients as well as echinoderm associations. The results confirmed the existence of two faunal associations that correspond to the traditional zoogeographic scheme established for the Argentine Sea: the Argentinean and Magellan Provinces. The Argentinean Province had 46 widely distributed species. Of the 86 species recorded in the Magellan Province, a high percentage (25% were also found in Antarctic waters, suggesting a strong connection between the echinoderm fauna of this province and the Antarctic Region. The species richness between 34 and 56°S in the Atlantic Ocean showed a significant increase in reference to latitude, with the highest values being recorded between 46 and 56°S. In view of the high percentage of shared species with Antarctica, considered a hot-spot region in terms of echinoderm diversity, the pattern of distribution of species richness observed in our study area could correspond to a dispersion of this species from Antarctic to sub-Antarctic regions.

Molecular systematic of three species of Oithona (Copepoda, Cyclopoida from the Atlantic Ocean: comparative analysis using 28S rDNA.

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Georgina D Cepeda

Full Text Available Species of Oithona (Copepoda, Cyclopoida are highly abundant, ecologically important, and widely distributed throughout the world oceans. Although there are valid and detailed descriptions of the species, routine species identifications remain challenging due to their small size, subtle morphological diagnostic traits, and the description of geographic forms or varieties. This study examined three species of Oithona (O. similis, O. atlantica and O. nana occurring in the Argentine sector of the South Atlantic Ocean based on DNA sequence variation of a 575 base-pair region of 28S rDNA, with comparative analysis of these species from other North and South Atlantic regions. DNA sequence variation clearly resolved and discriminated the species, and revealed low levels of intraspecific variation among North and South Atlantic populations of each species. The 28S rDNA region was thus shown to provide an accurate and reliable means of identifying the species throughout the sampled domain. Analysis of 28S rDNA variation for additional species collected throughout the global ocean will be useful to accurately characterize biogeographical distributions of the species and to examine phylogenetic relationships among them.

Marine species survey of Johnson Atoll, Central Pacific Ocean June 2000 (NODC Accession 0000697)

Data.gov (United States)

National Oceanic and Atmospheric Administration, Department of Commerce — The marine biota of Johnston atoll was surveyed for nonindigenous species in June, 2000 with observations and collections made by investigators using Scuba. Eleven...

Marine Species Survey of Johnston Atoll, Central Pacific Ocean, June 2000 (NODC Accession 0000670)

Data.gov (United States)

National Oceanic and Atmospheric Administration, Department of Commerce — The marine biota of Johnston atoll was surveyed for non-indigenous species in June, 2000 with observations and collections made by investigators using Scuba. Eleven...

The magnapinnidae, a newly discovered family of oceanic Squid ...

African Journals Online (AJOL)

A peculiar squid paralarva from Hawaiian waters was described by Young (1991, Bull. mar. Sci. 49(1–2): 162–185), but it could not be assigned to any known family. Two larger juvenile specimens have now been obtained, one collected near the surface in the eastern Pacific Ocean and the other rehydrated from a dried ...

Ammolagena clavata (Jones and Parker, 1860), an agglutinated benthic foraminiferal species - first report from the Recent sediments, Arabian Sea, Indian Ocean region

Digital Repository Service at National Institute of Oceanography (India)

Nigam, R.; Mazumder, A.; Saraswat, R.

The rare presence of the agglutinated foraminiferal species Ammolagena clavata is presented for the first time from the Recent sediments of the Indian Ocean region. This species has previously been reported in Recent sediments from all other oceans...

Biogeography in Cellana (Patellogastropoda, Nacellidae with Special Emphasis on the Relationships of Southern Hemisphere Oceanic Island Species.

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Claudio A González-Wevar

Full Text Available Oceanic islands lacking connections to other land are extremely isolated from sources of potential colonists and have acquired their biota mainly through dispersal from geographically distant areas. Hence, isolated island biota constitutes interesting models to infer biogeographical mechanisms of dispersal, colonization, differentiation, and speciation. Limpets of the genus Cellana (Nacellidae: Patellogastropoda show limited dispersal capacity but are broadly distributed across the Indo-Pacific including many endemic species in isolated oceanic islands. Here, we examined main distributional patterns and geographic boundaries among Cellana lineages with special emphasis in the relationships of Southern Hemisphere oceanic islands species. Phylogenetic reconstructions based on mtDNA (COI recognized three main clades in Cellana including taxa from different provinces of the Indo-Pacific. Clear genetic discontinuities characterize the biogeography of Cellana and several lineages are associated to particular areas of the Indo-Pacific supporting the low dispersal capacity of the genus across recognized biogeographical barriers in the region. However, evolutionary relationships within Cellana suggest that long-distance dispersal processes have been common in the history of the genus and probably associated to the origin of the species in Hawaii and Juan Fernández Archipelago. Therefore, the presence of Cellana species in geographically distant Southern Hemisphere oceanic islands, such as the Juan Fernández Archipelago, suggests that long-distance dispersal mediated by rafting may have played an important role in the biogeography of the genus.

Biogeography in Cellana (Patellogastropoda, Nacellidae) with Special Emphasis on the Relationships of Southern Hemisphere Oceanic Island Species

Science.gov (United States)

Nakano, Tomoyuki; Palma, Alvaro; Poulin, Elie

2017-01-01

Oceanic islands lacking connections to other land are extremely isolated from sources of potential colonists and have acquired their biota mainly through dispersal from geographically distant areas. Hence, isolated island biota constitutes interesting models to infer biogeographical mechanisms of dispersal, colonization, differentiation, and speciation. Limpets of the genus Cellana (Nacellidae: Patellogastropoda) show limited dispersal capacity but are broadly distributed across the Indo-Pacific including many endemic species in isolated oceanic islands. Here, we examined main distributional patterns and geographic boundaries among Cellana lineages with special emphasis in the relationships of Southern Hemisphere oceanic islands species. Phylogenetic reconstructions based on mtDNA (COI) recognized three main clades in Cellana including taxa from different provinces of the Indo-Pacific. Clear genetic discontinuities characterize the biogeography of Cellana and several lineages are associated to particular areas of the Indo-Pacific supporting the low dispersal capacity of the genus across recognized biogeographical barriers in the region. However, evolutionary relationships within Cellana suggest that long-distance dispersal processes have been common in the history of the genus and probably associated to the origin of the species in Hawaii and Juan Fernández Archipelago. Therefore, the presence of Cellana species in geographically distant Southern Hemisphere oceanic islands, such as the Juan Fernández Archipelago, suggests that long-distance dispersal mediated by rafting may have played an important role in the biogeography of the genus. PMID:28099466

Opisthobranchs from the western Indian Ocean, with descriptions of two new species and ten new records (Mollusca, Gastropoda

Directory of Open Access Journals (Sweden)

Nathalie Yonow

2012-05-01

Full Text Available Seventy species of opisthobranchs are described in this work based on collections from the Persian Gulf, Socotra, Kenya, Zanzibar, Madagascar, La Réunion, Mauritius, the Seychelles, the Maldives, and Sri Lanka. Ten species are newly recorded from the western Indian Ocean and four species are recorded in the scientific literature for the first time since their original descriptions. Two species are described as new: Cyerce bourbonica sp. n. from La Réand Doriopsilla nigrocera sp. n. from the Persian Gulf coast of Saudi Arabia. Chromodoris cavae is removed from its synonymy with C. tennentana and redescribed from specimens from La Réunion, while several new synonyms are proposed for some commonly occurring species. Risbecia bullockii is recorded for the second time from the Indian Ocean and assigned to its correct genus.

A novel widespread cryptic species and phylogeographic patterns within several giant clam species (Cardiidae: Tridacna) from the Indo-Pacific Ocean.

Science.gov (United States)

Huelsken, Thomas; Keyse, Jude; Liggins, Libby; Penny, Shane; Treml, Eric A; Riginos, Cynthia

2013-01-01

Giant clams (genus Tridacna) are iconic coral reef animals of the Indian and Pacific Oceans, easily recognizable by their massive shells and vibrantly colored mantle tissue. Most Tridacna species are listed by CITES and the IUCN Redlist, as their populations have been extensively harvested and depleted in many regions. Here, we survey Tridacna crocea and Tridacna maxima from the eastern Indian and western Pacific Oceans for mitochondrial (COI and 16S) and nuclear (ITS) sequence variation and consolidate these data with previous published results using phylogenetic analyses. We find deep intraspecific differentiation within both T. crocea and T. maxima. In T. crocea we describe a previously undocumented phylogeographic division to the east of Cenderawasih Bay (northwest New Guinea), whereas for T. maxima the previously described, distinctive lineage of Cenderawasih Bay can be seen to also typify western Pacific populations. Furthermore, we find an undescribed, monophyletic group that is evolutionarily distinct from named Tridacna species at both mitochondrial and nuclear loci. This cryptic taxon is geographically widespread with a range extent that minimally includes much of the central Indo-Pacific region. Our results reinforce the emerging paradigm that cryptic species are common among marine invertebrates, even for conspicuous and culturally significant taxa. Additionally, our results add to identified locations of genetic differentiation across the central Indo-Pacific and highlight how phylogeographic patterns may differ even between closely related and co-distributed species.

Effects of ocean acidification on the shells of four Mediterranean gastropod species near a CO2 seep.

Science.gov (United States)

Duquette, Ashley; McClintock, James B; Amsler, Charles D; Pérez-Huerta, Alberto; Milazzo, Marco; Hall-Spencer, Jason M

2017-11-30

Marine CO 2 seeps allow the study of the long-term effects of elevated pCO 2 (ocean acidification) on marine invertebrate biomineralization. We investigated the effects of ocean acidification on shell composition and structure in four ecologically important species of Mediterranean gastropods (two limpets, a top-shell snail, and a whelk). Individuals were sampled from three sites near a volcanic CO 2 seep off Vulcano Island, Italy. The three sites represented ambient (8.15pH), moderate (8.03pH) and low (7.73pH) seawater mean pH. Shell mineralogy, microstructure, and mechanical strength were examined in all four species. We found that the calcite/aragonite ratio could vary and increased significantly with reduced pH in shells of one of the two limpet species. Moreover, each of the four gastropods displayed reductions in either inner shell toughness or elasticity at the Low pH site. These results suggest that near-future ocean acidification could alter shell biomineralization and structure in these common gastropods. Copyright © 2017 Elsevier Ltd. All rights reserved.

Species richness and distribution of chondrichthyan fishes in the Arctic Ocean and adjacent seas

DEFF Research Database (Denmark)

Lynghammar, A.; Christiansen, J. S.; Mecklenburg, C. W.

2013-01-01

The sea ice cover decreases and human activity increases in Arctic waters. Fisheries and bycatch issues, shipping and petroleum exploitation (pollution issues) make it imperative to establish biological baselines for the marine fishes inhabiting the Arctic Ocean and adjacent seas (AOAS). Species...... richness, zoogeographic affiliations and Red List statuses among chondrichthyan fishes (Chondrichthyes) were examined across 16 AOAS regions as a first step towards credible conservation actions. Published literature and museum vouchers were consulted for presence/absence data. Although many regions...... are poorly sampled, 49 chondrichthyan species have been reported from the AOAS. Skates and rays are the most species-rich taxon, represented by 27 species in family Rajidae and one species in family Dasyatidae. The sharks comprise 20 species in 13 families and the chimaeras one species in family Chimaeridae...

Functional impacts of ocean acidification in an ecologically critical foundation species.

Science.gov (United States)

Gaylord, Brian; Hill, Tessa M; Sanford, Eric; Lenz, Elizabeth A; Jacobs, Lisa A; Sato, Kirk N; Russell, Ann D; Hettinger, Annaliese

2011-08-01

Anthropogenic CO(2) is reducing the pH and altering the carbonate chemistry of seawater, with repercussions for marine organisms and ecosystems. Current research suggests that calcification will decrease in many species, but compelling evidence of impaired functional performance of calcium carbonate structures is sparse, particularly in key species. Here we demonstrate that ocean acidification markedly degrades the mechanical integrity of larval shells in the mussel Mytilus californianus, a critical community member on rocky shores throughout the northeastern Pacific. Larvae cultured in seawater containing CO(2) concentrations expected by the year 2100 (540 or 970 ppm) precipitated weaker, thinner and smaller shells than individuals raised under present-day seawater conditions (380 ppm), and also exhibited lower tissue mass. Under a scenario where mussel larvae exposed to different CO(2) levels develop at similar rates, these trends suggest a suite of potential consequences, including an exacerbated vulnerability of new settlers to crushing and drilling attacks by predators; poorer larval condition, causing increased energetic stress during metamorphosis; and greater risks from desiccation at low tide due to shifts in shell area to body mass ratios. Under an alternative scenario where responses derive exclusively from slowed development, with impacted individuals reaching identical milestones in shell strength and size by settlement, a lengthened larval phase could increase exposure to high planktonic mortality rates. In either case, because early life stages operate as population bottlenecks, driving general patterns of distribution and abundance, the ecological success of this vital species may be tied to how ocean acidification proceeds in coming decades.

Differences in neurochemical profiles of two gadid species under ocean warming and acidification.

Science.gov (United States)

Schmidt, Matthias; Windisch, Heidrun Sigrid; Ludwichowski, Kai-Uwe; Seegert, Sean Lando Levin; Pörtner, Hans-Otto; Storch, Daniela; Bock, Christian

2017-01-01

Exposure to future ocean acidification scenarios may alter the behaviour of marine teleosts through interference with neuroreceptor functioning. So far, most studies investigated effects of ocean acidification on the behaviour of fish, either isolated or in combination with environmental temperature. However, only few physiological studies on this issue were conducted despite the putative neurophysiological origin of the CO 2 -induced behavioural changes. Here, we present the metabolic consequences of long-term exposure to projected ocean acidification (396-548 μatm P CO 2 under control and 915-1272 μatm under treatment conditions) and parallel warming in the brain of two related fish species, polar cod ( Boreogadus saida , exposed to 0 °C, 3 °C, 6 °C and 8 °C) and Atlantic cod ( Gadus morhua , exposed to 3 °C, 8 °C, 12 °C and 16 °C). It has been shown that B. saida is behaviourally vulnerable to future ocean acidification scenarios, while G. morhua demonstrates behavioural resilience. We found that temperature alters brain osmolyte, amino acid, choline and neurotransmitter concentrations in both species indicating thermal responses particularly in osmoregulation and membrane structure. In B. saida, changes in amino acid and osmolyte metabolism at the highest temperature tested were also affected by CO 2 , possibly emphasizing energetic limitations. We did not observe changes in neurotransmitters, energy metabolites, membrane components or osmolytes that might serve as a compensatory mechanism against CO 2 induced behavioural impairments. In contrast to B. saida , such temperature limitation was not detected in G. morhua ; however, at 8 °C, CO 2 induced an increase in the levels of metabolites of the glutamate/GABA-glutamine cycle potentially indicating greater GABAergic activity in G.morhua . Further, increased availability of energy-rich substrates was detected under these conditions. Our results indicate a change of GABAergic metabolism in

Using internet images to gather distributional data for a newly discovered Caloptilia species (Lepidoptera: Gracillariidae) specializing on Chinese tallow in North America

Science.gov (United States)

Chinese tallow tree (Triadica sebifera (L.), Euphorbiaceae) is a noxious and highly invasive species that was deliberately introduced to GA in 1772. In early 2009, an unfamiliar caterpillar was independently discovered feeding on T. sebifera trees in Gainesville, FL and Slidell, LA. Adult moths were...

Evolution of C-O-H-N volatile species in the magma ocean during core formation.

Science.gov (United States)

Dalou, C.; Le Losq, C.; Hirschmann, M. M.; Jacobsen, S. D.; Fueri, E.

2017-12-01

The composition of the Hadean atmosphere affected how life began on Earth. Magma ocean degassing of C, O, H, and N was a key influence on the composition of the Hadean atmosphere. To identify the nature of degassed C-O-H-N species, we determined their speciation in reduced basaltic glasses (in equilibrium with Fe-C-N metal alloy, synthetized at 1400 and 1600 ºC and 1.2-3 GPa) via Raman spectroscopy. We addressed the effect of oxygen fugacity (fO2) on C-O-H-N speciation between IW-2.3 and IW-0.4, representing the evolution of the shallow upper mantle fO2 during the Hadean. We observe H2, NH2, NH3, CH3, CH4, CO, N2, and OH species in all glasses. With increasing ƒO2, our results support the formation of OH groups at the expense of N-H and C-H bonds in the melt, implying the equilibria at IW-2: (1) 2OH- (melt) + ½ N2 (melt) ↔ NH2 (melt) + 2 O2- (melt) , (2) 2OH- (melt) + ½ N2 (melt) + ½ H2 (melt) ↔ NH3 (melt) + 2 O2- (melt) . With increasing fO2, eqs. (1) and (2) shift to the left. From IW-2 to IW, we also observe an increase in the intensity of the NH2 peak relative to NH3. Carbon is present as CH3, CH4, and CO in all our glasses. While CO is likely the main carbon specie under reduced conditions (e.g., Armstrong et al. 2015), CH species should remain stable from moderately (IW-0.4) to very reduced (IW-3; Ardia et al. 2014; Kadik et al. 2015, 2017) conditions in hydrous silicate glasses following the equilibria: (3) 3OH- (melt) + C (graphite) ↔ CH3 (melt) + 3O2- (melt) , (4) 4OH- (melt) + C (graphite) ↔ CH4 (melt) + 4O2- (melt) . With increasing fO2, eqs. (3) and (4) shift to the left. As metal segregation and core formation drove the ƒO2 of the magma ocean from IW-4 to IW during the Hadean (Rubie et al. 2011), the nature of species degassed by the magma ocean should have evolved during that time. The C-O-H-N species we observe dissolved in our reduced glasses may not directly correspond to those degassed (Schaeffer and Fegley, 2007), but a better

A novel widespread cryptic species and phylogeographic patterns within several giant clam species (Cardiidae: Tridacna from the Indo-Pacific Ocean.

Directory of Open Access Journals (Sweden)

Thomas Huelsken

Full Text Available Giant clams (genus Tridacna are iconic coral reef animals of the Indian and Pacific Oceans, easily recognizable by their massive shells and vibrantly colored mantle tissue. Most Tridacna species are listed by CITES and the IUCN Redlist, as their populations have been extensively harvested and depleted in many regions. Here, we survey Tridacna crocea and Tridacna maxima from the eastern Indian and western Pacific Oceans for mitochondrial (COI and 16S and nuclear (ITS sequence variation and consolidate these data with previous published results using phylogenetic analyses. We find deep intraspecific differentiation within both T. crocea and T. maxima. In T. crocea we describe a previously undocumented phylogeographic division to the east of Cenderawasih Bay (northwest New Guinea, whereas for T. maxima the previously described, distinctive lineage of Cenderawasih Bay can be seen to also typify western Pacific populations. Furthermore, we find an undescribed, monophyletic group that is evolutionarily distinct from named Tridacna species at both mitochondrial and nuclear loci. This cryptic taxon is geographically widespread with a range extent that minimally includes much of the central Indo-Pacific region. Our results reinforce the emerging paradigm that cryptic species are common among marine invertebrates, even for conspicuous and culturally significant taxa. Additionally, our results add to identified locations of genetic differentiation across the central Indo-Pacific and highlight how phylogeographic patterns may differ even between closely related and co-distributed species.

Diatom species abundance and morphologically-based dissolution proxies in coastal Southern Ocean assemblages

Science.gov (United States)

Warnock, Jonathan P.; Scherer, Reed P.

2015-07-01

Taphonomic processes alter diatom assemblages in sediments, thus potentially negatively impacting paleoclimate records at various rates across space, time, and taxa. However, quantitative taphonomic data is rarely included in diatom-based paleoenvironmental reconstructions and no objective standard exists for comparing diatom dissolution in sediments recovered from marine depositional settings, including the Southern Ocean's opal belt. Furthermore, identifying changes to diatom dissolution through time can provide insight into the efficiency of both upper water column nutrient recycling and the biological pump. This is significant in that reactive metal proxies (e.g. Al, Ti) in the sediments only account for post-depositional dissolution, not the water column where the majority of dissolution occurs. In order to assess the range of variability of responses to dissolution in a typical Southern Ocean diatom community and provide a quantitative guideline for assessing taphonomic variability in diatoms recovered from core material, a sediment trap sample was subjected to controlled, serial dissolution. By evaluating dissolution-induced changes to diatom species' relative abundance, three preservational categories of diatoms have been identified: gracile, intermediate, and robust. The relative abundances of these categories can be used to establish a preservation grade for diatom assemblages. However, changes to the relative abundances of diatom species in sediment samples may reflect taphonomic or ecological factors. In order to address this complication, relative abundance changes have been tied to dissolution-induced morphological change to the areolae of Fragilariopsis curta, a significant sea-ice indicator in Southern Ocean sediments. This correlation allows differentiation between gracile species loss to dissolution versus ecological factors or sediment winnowing. These results mirror a similar morphological dissolution index from a parallel study utilizing

Age and area predict patterns of species richness in pumice rafts contingent on oceanic climatic zone encountered.

Science.gov (United States)

Velasquez, Eleanor; Bryan, Scott E; Ekins, Merrick; Cook, Alex G; Hurrey, Lucy; Firn, Jennifer

2018-05-01

The theory of island biogeography predicts that area and age explain species richness patterns (or alpha diversity) in insular habitats. Using a unique natural phenomenon, pumice rafting, we measured the influence of area, age, and oceanic climate on patterns of species richness. Pumice rafts are formed simultaneously when submarine volcanoes erupt, the pumice clasts breakup irregularly, forming irregularly shaped pumice stones which while floating through the ocean are colonized by marine biota. We analyze two eruption events and more than 5,000 pumice clasts collected from 29 sites and three climatic zones. Overall, the older and larger pumice clasts held more species. Pumice clasts arriving in tropical and subtropical climates showed this same trend, where in temperate locations species richness (alpha diversity) increased with area but decreased with age. Beta diversity analysis of the communities forming on pumice clasts that arrived in different climatic zones showed that tropical and subtropical clasts transported similar communities, while species composition on temperate clasts differed significantly from both tropical and subtropical arrivals. Using these thousands of insular habitats, we find strong evidence that area and age but also climatic conditions predict the fundamental dynamics of species richness colonizing pumice clasts.

Cryptic lineage differentiation among Indo-Pacific bottlenose dolphins (Tursiops aduncus) in the northwest Indian Ocean.

Science.gov (United States)

Gray, H W I; Nishida, S; Welch, A J; Moura, A E; Tanabe, S; Kiani, M S; Culloch, R; Möller, L; Natoli, A; Ponnampalam, L S; Minton, G; Gore, M; Collins, T; Willson, A; Baldwin, R; Hoelzel, A R

2018-05-01

Phylogeography can provide insight into the potential for speciation and identify geographic regions and evolutionary processes associated with species richness and evolutionary endemism. In the marine environment, highly mobile species sometimes show structured patterns of diversity, but the processes isolating populations and promoting differentiation are often unclear. The Delphinidae (oceanic dolphins) are a striking case in point and, in particular, bottlenose dolphins (Tursiops spp.). Understanding the radiation of species in this genus is likely to provide broader inference about the processes that determine patterns of biogeography and speciation, because both fine-scale structure over a range of kilometers and relative panmixia over an oceanic range are known for Tursiops populations. In our study, novel Tursiops spp. sequences from the northwest Indian Ocean (including mitogenomes and two nuDNA loci) are included in a worldwide Tursiops spp. phylogeographic analysis. We discover a new 'aduncus' type lineage in the Arabian Sea (off India, Pakistan and Oman) that diverged from the Australasian lineage ∼261 Ka. Effective management of coastal dolphins in the region will need to consider this new lineage as an evolutionarily significant unit. We propose that the establishment of this lineage could have been in response to climate change during the Pleistocene and show data supporting hypotheses for multiple divergence events, including vicariance across the Indo-Pacific barrier and in the northwest Indian Ocean. These data provide valuable transferable inference on the potential mechanisms for population and species differentiation across this geographic range. Copyright © 2017 Elsevier Inc. All rights reserved.

Origin and diversification of Hibiscus glaber, species endemic to the oceanic Bonin Islands, revealed by chloroplast DNA polymorphism.

Science.gov (United States)

Takayama, Koji; Ohi-Toma, Tetsuo; Kudoh, Hiroshi; Kato, Hidetoshi

2005-04-01

Abstract Two woody Hibiscus species co-occur in the Bonin Islands of the northwestern Pacific Ocean: Hibiscus glaber Matsum. is endemic to the islands, and its putative ancestral species, Hibiscus tiliaceus L., is widely distributed in coastal areas of the tropics and subtropics. To infer isolating mechanisms that led to speciation of H. glaber and the processes that resulted in co-occurrence of the two closely related species on the Bonin Islands, we conducted molecular phylogenetic analyses on chloroplast DNA (cpDNA) sequences. Materials collected from a wide area of the Pacific and Indian Oceans were used, and two closely related species, Hibiscus hamabo Siebold Zucc. and Hibiscus macrophyllus Roxb., were also included in the analyses. The constructed tree suggested that H. glaber has been derived from H. tiliaceus, and that most of the modern Bonin populations of H. tiliaceus did not share most recent ancestry with H. glaber. Geographic isolation appears to be the most important mechanism in the speciation of H. glaber. The co-occurrence of the two species can be attributed to multiple migrations of different lineages into the islands. While a wide and overlapping geographical distribution of haplotypes was found in H. tiliaceus, localized geographical distribution of haplotypes was detected in H. glaber. It is hypothesized that a shift to inland habitats may have affected the mode of seed dispersal from ocean currents to gravity and hence resulted in geographical structuring of H. glaber haplotypes.

Variability in larval gut pH regulation defines sensitivity to ocean acidification in six species of the Ambulacraria superphylum.

Science.gov (United States)

Hu, Marian; Tseng, Yung-Che; Su, Yi-Hsien; Lein, Etienne; Lee, Hae-Gyeong; Lee, Jay-Ron; Dupont, Sam; Stumpp, Meike

2017-10-11

The unusual rate and extent of environmental changes due to human activities may exceed the capacity of marine organisms to deal with this phenomenon. The identification of physiological systems that set the tolerance limits and their potential for phenotypic buffering in the most vulnerable ontogenetic stages become increasingly important to make large-scale projections. Here, we demonstrate that the differential sensitivity of non-calcifying Ambulacraria (echinoderms and hemichordates) larvae towards simulated ocean acidification is dictated by the physiology of their digestive systems. Gastric pH regulation upon experimental ocean acidification was compared in six species of the superphylum Ambulacraria. We observed a strong correlation between sensitivity to ocean acidification and the ability to regulate gut pH. Surprisingly, species with tightly regulated gastric pH were more sensitive to ocean acidification. This study provides evidence that strict maintenance of highly alkaline conditions in the larval gut of Ambulacraria early life stages may dictate their sensitivity to decreases in seawater pH. These findings highlight the importance of identifying and understanding pH regulatory systems in marine larval stages that may contribute to substantial energetic challenges under near-future ocean acidification scenarios. © 2017 The Author(s).

Discovering Engangered Species. A Learning and Activity Book.

Science.gov (United States)

Field, Nancy; Machlis, Sally

Up to 33 million species share the earth; no one knows the exact number for sure. All over the world, many species are becoming extinct. This workbook is designed to help children become more aware of the concept of extinction, and to develop personal strategies for helping with the problem of endangered species. Included are 31 activities…

Mercury Bioaccumulation Response to Recent Hg Pollution Abatement in an Oceanic Predatory Fish, Blue Marlin, Versus the Response in a Coastal Predatory Species, Bluefish, in the Western North Atlantic Ocean

Science.gov (United States)

Barber, R. T.; Cross, F. A.

2015-12-01

The consumption of marine fish, especially predatory species high in the food chain, is the major route through which people in developed countries are exposed to mercury. Recent work on a coastal species, bluefish (Pomatomus saltatrix), determined that the mercury concentration in fish from the U. S. Mid-Atlantic coast decreased 43% from 1972 to 2011. This mercury decline in a coastal marine fish parallels the mercury decline in many freshwater fish in the U.S. and Canada during the same time period. The result heightens interest in determining whether or not there has been any change in mercury concentration in oceanic predatory fish species, that is, fish that are permanent residents of the open ocean, during the past four decades. To answer this question we compared mercury analyses we made in the 1970s on tournament-caught blue marlin (Makaira nigricans) with those we made from 1998 to 2013. This comparison indicates that from the 1970s to 2013 mercury concentration in blue marlin caught in the western North Atlantic Ocean off the U.S. east coast has declined about 45%, a decline that is remarkably similar to the decline reported in coastal bluefish. These results suggest that a large area of the western North Atlantic Ocean is responding to reductions in emissions of mercury in the U.S. and Canada with reduced mercury bioaccumulation in predatory fish.

Pliocene granodioritic knoll with continental crust affinities discovered in the intra-oceanic Izu-Bonin-Mariana Arc: Syntectonic granitic crust formation during back-arc rifting

Science.gov (United States)

Tani, Kenichiro; Dunkley, Daniel J.; Chang, Qing; Nichols, Alexander R. L.; Shukuno, Hiroshi; Hirahara, Yuka; Ishizuka, Osamu; Arima, Makoto; Tatsumi, Yoshiyuki

2015-08-01

A widely held hypothesis is that modern continental crust of an intermediate (i.e. andesitic) bulk composition forms at intra-oceanic arcs through subduction zone magmatism. However, there is a critical paradox in this hypothesis: to date, the dominant granitic rocks discovered in these arcs are tonalite, rocks that are significantly depleted in incompatible (i.e. magma-preferred) elements and do not geochemically and petrographically represent those of the continents. Here we describe the discovery of a submarine knoll, the Daisan-West Sumisu Knoll, situated in the rear-arc region of the intra-oceanic Izu-Bonin-Mariana Arc. Remotely-operated vehicle surveys reveal that this knoll is made up entirely of a 2.6 million year old porphyritic to equigranular granodiorite intrusion with a geochemical signature typical of continental crust. We present a model of granodiorite magma formation that involves partial remelting of enriched mafic rear-arc crust during the initial phase of back-arc rifting, which is supported by the preservation of relic cores inherited from initial rear-arc source rocks within magmatic zircon crystals. The strong extensional tectonic regime at the time of intrusion may have allowed the granodioritic magma to be emplaced at an extremely shallow level, with later erosion of sediment and volcanic covers exposing the internal plutonic body. These findings suggest that rear-arc regions could be the potential sites of continental crust formation in intra-oceanic convergent margins.

Marine mammals as sentinel species for oceans and human health.

Science.gov (United States)

Bossart, G D

2011-05-01

The long-term consequences of climate change and potential environmental degradation are likely to include aspects of disease emergence in marine plants and animals. In turn, these emerging diseases may have epizootic potential, zoonotic implications, and a complex pathogenesis involving other cofactors such as anthropogenic contaminant burden, genetics, and immunologic dysfunction. The concept of marine sentinel organisms provides one approach to evaluating aquatic ecosystem health. Such sentinels are barometers for current or potential negative impacts on individual- and population-level animal health. In turn, using marine sentinels permits better characterization and management of impacts that ultimately affect animal and human health associated with the oceans. Marine mammals are prime sentinel species because many species have long life spans, are long-term coastal residents, feed at a high trophic level, and have unique fat stores that can serve as depots for anthropogenic toxins. Marine mammals may be exposed to environmental stressors such as chemical pollutants, harmful algal biotoxins, and emerging or resurging pathogens. Since many marine mammal species share the coastal environment with humans and consume the same food, they also may serve as effective sentinels for public health problems. Finally, marine mammals are charismatic megafauna that typically stimulate an exaggerated human behavioral response and are thus more likely to be observed.

Zooplankton species identities collected from zooplankton net casts in Indian Ocean from 17 February 1960 to 23 July 1962 (NODC Accession 9400059)

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National Oceanic and Atmospheric Administration, Department of Commerce — Zooplankton species identities and other data were collected using zooplankton net casts in the Indian Ocean. Data were collected from 17 February 1960 to 23 July...

A “Rosetta Stone” for metazoan zooplankton: DNA barcode analysis of species diversity of the Sargasso Sea (Northwest Atlantic Ocean)

Science.gov (United States)

Bucklin, Ann; Ortman, Brian D.; Jennings, Robert M.; Nigro, Lisa M.; Sweetman, Christopher J.; Copley, Nancy J.; Sutton, Tracey; Wiebe, Peter H.

2010-12-01

Species diversity of the metazoan holozooplankton assemblage of the Sargasso Sea, Northwest Atlantic Ocean, was examined through coordinated morphological taxonomic identification of species and DNA sequencing of a ˜650 base-pair region of mitochondrial cytochrome oxidase I (mtCOI) as a DNA barcode (i.e., short sequence for species recognition and discrimination). Zooplankton collections were made from the surface to 5,000 meters during April, 2006 on the R/V R.H. Brown. Samples were examined by a ship-board team of morphological taxonomists; DNA barcoding was carried out in both ship-board and land-based DNA sequencing laboratories. DNA barcodes were determined for a total of 297 individuals of 175 holozooplankton species in four phyla, including: Cnidaria (Hydromedusae, 4 species; Siphonophora, 47); Arthropoda (Amphipoda, 10; Copepoda, 34; Decapoda, 9; Euphausiacea, 10; Mysidacea, 1; Ostracoda, 27); and Mollusca (Cephalopoda, 8; Heteropoda, 6; Pteropoda, 15); and Chaetognatha (4). Thirty species of fish (Teleostei) were also barcoded. For all seven zooplankton groups for which sufficient data were available, Kimura-2-Parameter genetic distances were significantly lower between individuals of the same species (mean=0.0114; S.D. 0.0117) than between individuals of different species within the same group (mean=0.3166; S.D. 0.0378). This difference, known as the barcode gap, ensures that mtCOI sequences are reliable characters for species identification for the oceanic holozooplankton assemblage. In addition, DNA barcodes allow recognition of new or undescribed species, reveal cryptic species within known taxa, and inform phylogeographic and population genetic studies of geographic variation. The growing database of "gold standard" DNA barcodes serves as a Rosetta Stone for marine zooplankton, providing the key for decoding species diversity by linking species names, morphology, and DNA sequence variation. In light of the pivotal position of zooplankton in ocean

Genetic species identification and population structure of Halophila (Hydrocharitaceae) from the Western Pacific to the Eastern Indian Ocean.

Science.gov (United States)

Nguyen, Vy X; Detcharoen, Matsapume; Tuntiprapas, Piyalap; Soe-Htun, U; Sidik, Japar B; Harah, Muta Z; Prathep, Anchana; Papenbrock, Jutta

2014-04-30

The Indo-Pacific region has the largest number of seagrass species worldwide and this region is considered as the origin of the Hydrocharitaceae. Halophila ovalis and its closely-related species belonging to the Hydrocharitaceae are well-known as a complex taxonomic challenge mainly due to their high morphological plasticity. The relationship of genetic differentiation and geographic barriers of H. ovalis radiation was not much studied in this region. Are there misidentifications between H. ovalis and its closely related species? Does any taxonomic uncertainty among different populations of H. ovalis persist? Is there any genetic differentiation among populations in the Western Pacific and the Eastern Indian Ocean, which are separated by the Thai-Malay peninsula? Genetic markers can be used to characterize and identify individuals or species and will be used to answer these questions. Phylogenetic analyses of the nuclear ribosomal internal transcribed spacer region based on materials collected from 17 populations in the Western Pacific and the Eastern Indian Ocean showed that some specimens identified as H. ovalis belonged to the H. major clade, also supported by morphological data. Evolutionary divergence between the two clades is between 0.033 and 0.038, much higher than the evolutionary divergence among H. ovalis populations. Eight haplotypes were found; none of the haplotypes from the Western Pacific is found in India and vice versa. Analysis of genetic diversity based on microsatellite analysis revealed that the genetic diversity in the Western Pacific is higher than in the Eastern Indian Ocean. The unrooted neighbor-joining tree among 14 populations from the Western Pacific and the Eastern Indian Ocean showed six groups. The Mantel test results revealed a significant correlation between genetic and geographic distances among populations. Results from band-based and allele frequency-based approaches from Amplified Fragment Length Polymorphism showed that all

Hydrothermal and Chemosynthetic Ecosystems in the Southern Ocean: Current Knowledge on their Biology Paper 217790

Science.gov (United States)

Linse, K.; Rogers, A. D.; Bohrmann, G.; Copley, J.; Tyler, P. A.

2017-12-01

The existence of hydrothermal and other chemosynthetic ecosystems is not surprising in the Antarctic, with its active volcanoes, mid-ocean ridges and back-arc basins, and abundance of marine mammals. In the last two decades a variety of active chemosynthetic ecosystems have been discovered in the Southern Ocean, including low- and high-temperature hydrothermal vents, methane seeps, and whalefalls. Here a summary of the data from the known chemosynthetic communites will be presented, comparing the faunas of vent sites in the Bransfield Strait with those of the East Scotia Ridge (ESR) and the South Sandwich Arc, assessing the fauna at the South Georgia methane seep sites, and discussing the fauna on Antarctic whale falls. As the faunal assemblages of the ESR vents are the most studied in detail to date, this talk therefore focusses on the diversity and composition of the ESR macrofaunal assemblages, their foodweb structure and microdistributions in relation to fluid chemistry and microbiology, and their phylogenetic and biogeographic relationships. The Southern Ocean drives the global ocean conveyor belt, and is suggested to be the centre of origin for global deep-sea fauna, as well as a region of high deep-sea species diversity. In the context of chemosynthetic environments, it may provide a gateway connecting the global vent and seep systems. The mostly endemic species of Southern Ocean vent macrofauna show links to either one or more oceans (Atlantic, Indian, and Pacific), with some evidence for circum-Antarctic connection. The ESR species Gigantopelta chessoia, Kiwa tyleri and Vulcanolepas scotiaensis have their closest known relatives at the Longqi Vent Field on the Southwest Indian Ridge (SWIR), and one species of polynoid polychaete is known from ESR and SWIR vents. Meanwhile, Lepetdrilus sp. and a vesiocomyid clam are linked with species in the Atlantic vent fields. The stichasterid Paulasterias tyleri, the polychaete Rarricirrus jennae and the anthozoan

Cunea n. g. (Amoebozoa, Dactylopodida) with two cryptic species isolated from different areas of the ocean

KAUST Repository

Kudryavtsev, Alexander

2015-06-01

© 2015 Elsevier GmbH. This paper describes a new genus, Cunea n. g., of marine naked amoebae with two cryptic species, Cunea profundata and Cunea thuwala, isolated from distant localities in the ocean and different depths (Brazilian abyssal plain, Western Atlantic Ocean, depth >5. km and the Red Sea off the Saudi Arabian coast, depth ca. 58.7. m). Both species are very similar to each other in the set of light microscopic and ultrastructural characters and might be described as a single species, yet their genetic divergence based on 3 molecular markers (small-subunit ribosomal RNA, actin and cytochrome c oxidase subunit 1) corresponds to the level of variation typically observed between different morphospecies of Amoebozoa. In addition, the studied strains differ strongly in their temperature tolerance ranges, C. profundata isolated from the cold Atlantic deep-sea habitat being able to reproduce under lower temperatures than C. thuwala isolated from the warm Red Sea benthos. Molecular phylogenetic analysis based on SSU rRNA gene shows that the new genus robustly branches within the Dactylopodida, but forms an independent clade within this order that does not group with any of its known genera.

Cunea n. g. (Amoebozoa, Dactylopodida) with two cryptic species isolated from different areas of the ocean

KAUST Repository

Kudryavtsev, Alexander; Pawlowski, Jan

2015-01-01

© 2015 Elsevier GmbH. This paper describes a new genus, Cunea n. g., of marine naked amoebae with two cryptic species, Cunea profundata and Cunea thuwala, isolated from distant localities in the ocean and different depths (Brazilian abyssal plain, Western Atlantic Ocean, depth >5. km and the Red Sea off the Saudi Arabian coast, depth ca. 58.7. m). Both species are very similar to each other in the set of light microscopic and ultrastructural characters and might be described as a single species, yet their genetic divergence based on 3 molecular markers (small-subunit ribosomal RNA, actin and cytochrome c oxidase subunit 1) corresponds to the level of variation typically observed between different morphospecies of Amoebozoa. In addition, the studied strains differ strongly in their temperature tolerance ranges, C. profundata isolated from the cold Atlantic deep-sea habitat being able to reproduce under lower temperatures than C. thuwala isolated from the warm Red Sea benthos. Molecular phylogenetic analysis based on SSU rRNA gene shows that the new genus robustly branches within the Dactylopodida, but forms an independent clade within this order that does not group with any of its known genera.

Seven new species of Paleanotus (Annelida: Chrysopetalidae) described from Lizard Island, Great Barrier Reef, and coral reefs of northern Australia and the Indo-Pacific: two cryptic species pairs revealed between western Pacific Ocean and the eastern Indian Ocean.

Science.gov (United States)

Watson, Charlotte

2015-09-18

Morphological investigation into the paleate genus Paleanotus Schmarda 1861 of the family Chrysopetalidae from northern Australian coral reefs, primarily Lizard Island and outlying reefs, included a complex of very small, slender individuals (length < 5 mm). This complex resolved into 7 new species, described herein: Paleanotus inornatus n. sp., P. adornatus n. sp., P. chrysos n. sp., P. aquifolia n. sp., P. latifolia n. sp., P. silus n. sp., and P. silopsis n. sp. A key is provided to the new species and Paleanotus distinguished from Treptopale and Hyalopale, two closely related genera. Diagnostic features of the apical structure and shape of the notochaetal main paleae plus median paleae shape and raised rib pattern, differentiates each species from the other. Gametous states are described. Two cryptic species pairs (Paleanotus silopsis n. sp. and P. silus n. sp.; Paleanotus aquifolia n. sp. and P. latifolia n. sp.) were identified. In each case one species is restricted to either the NE or NW Australian coast. In each pair the most eastern point for the NW Australian species range occurs at Darwin, western Arnhemland, Northern Territory. Additional material for each species pair extends their respective ranges northwards: NW Australia to Thailand, Andaman Sea, eastern Indian Ocean or NE Australia, Great Barrier Reef to the Philippines, western Pacific Ocean. Cryptic morphology and potential genetic diversity is discussed in Paleanotus inornatus n. sp. and P. adornatus n. sp. that possess overlapping widespread distribution patterns across northern Australia and Indo-Pacific reefs. The smallest bodied taxon, Paleanotus chrysos n. sp. is the only species with a Coral Sea range encompassing Lizard Island, Heron Island and New Caledonia.

Hydraena Kugelann, 1794 (Coleoptera, Hydraenidae) from the Seychelles, Indian Ocean, with description of a new species.

Science.gov (United States)

Jäch, Manfred A; Delgado, Juan A

2016-01-01

Hydraena matyoti sp. n. (Coleoptera, Hydraenidae) is described from the Seychelles, Indian Ocean. Hydraena mahensis Scott, 1913 is redescribed. The latter is here recorded from La Digue for the first time. A key to the species of the genus Hydraena Kugelann, 1794 of the Seychelles is presented.

Taxonomy and morphology of species of the genus Squalus Linnaeus, 1758 from the Southwestern Atlantic Ocean (Chondrichthyes: Squaliformes: Squalidae).

Science.gov (United States)

Viana, Sarah T De F; Carvalho, Marcelo R De; Gomes, Ulisses L

2016-07-04

Squalus is a genus of reportedly cosmopolitan shark species that have a high taxonomic complexity due to difficulties in their morphological differentiation; many of its species need revision. Currently, there are 26 valid species of Squalus, which have been divided into three species-groups according to overall morphological similarity, the S. acanthias, S. megalops, and S. mitsukurii groups. Loss of type specimens, propagation of erroneous identifications in the literature, and difficulties in obtaining representative series for comparison are secondary challenges that have impeded a global taxonomic revision of the genus. This problem applies clearly to species from the Southwestern Atlantic Ocean, including species that occur off Brazil. Following a current global tendency, a regional taxonomic revision of Squalus was conducted in order to investigate which species are valid in the Southwestern Atlantic Ocean and provide diagnostic morphological characters that can be efficiently used for identifying species. Comparative detailed analysis of external (e.g. morphometrics, dentition, and color pattern) and skeletal morphology (primarily meristic data, neurocrania and claspers) of specimens of Squalus from the region revealed four new species that are herein described (S. albicaudus sp. nov., S. bahiensis sp. nov., S. lobularis sp. nov., and S. quasimodo sp. nov.), as well as S. acanthias, which is redescribed from the region based on new material. Comparisons are offered based on examinations of congeneric species; this work is part of a global systematic revision of Squalus.

Global assessment of oceanic lead pollution using sperm whales (Physeter macrocephalus) as an indicator species.

Science.gov (United States)

Savery, Laura C; Wise, Sandra S; Falank, Carolyne; Wise, James; Gianios, Christy; Douglas Thompson, W; Perkins, Christopher; Zheng, Tongzhang; Zhu, Cairong; Wise, John Pierce

2014-02-15

Lead (Pb) is an oceanic pollutant of global concern. Anthropogenic activities are increasing oceanic levels, but to an unknown extent. The sperm whale (Physeter macrocephalus) has a global distribution and high trophic level. The aim of this study was to establish a global baseline of oceanic Pb concentrations using free-ranging sperm whales as an indicator species. Skin biopsies (n=337) were collected during the voyage of the Odyssey (2000-2005) from 17 regions considering gender and age. Pb was detectable in 315 samples with a global mean of 1.6 ug/gww ranging from 0.1 to 129.6 ug/gww. Papua New Guinea, Bahamas and Australia had the highest regional mean with 6.1, 3.4, and 3.1 ug/gww, respectively. Pb concentrations were not significantly different between sex and age in males. This is the first global toxicological dataset for Pb in a marine mammal and confirms Pb is widely distributed with hotspots in some regions. Copyright © 2014. Published by Elsevier Ltd.

New sibling species and new occurrences of squat lobsters (Crustacea, Decapoda from the western Indian Ocean

Directory of Open Access Journals (Sweden)

Enrique Macpherson

2017-08-01

Full Text Available Numerous specimens of squat lobsters belonging to the families Munididae, Munidopsidae and Eumunididae were collected during several cruises along the eastern coasts of Africa. The study of these specimens revealed the presence of 10 new species (one Eumunida Smith, 1883, eight Munida Leach, 1820 and one Munidopsis Whiteaves, 1874. We describe and illustrate these new species, providing some new data on occurrences and colour patterns for previously described taxa. We have also included molecular data from two mitochondrial markers (16S rRNA and COI to support the taxonomic status of different species. Some deep-sea species show a clear increase in their geographic range distribution. Finally, a key to known species of the genus Munida from the western and central Indian Ocean is also presented.

Two Newly Discovered Plants in Taiwan

OpenAIRE

Tian-Chuan Hsu; Jia-Jung Lin; Shih-Wen Chung

2009-01-01

Two herbs are newly discovered in Taiwan. Limnophila fragrans (G. Forst.) Seem. (Scrophulariaceae), native in SE Asia, is recognized from southern lowlands. Anagallis minima (L.) E. H. L. Krause (Primulaceae), native in N America and Europe, was found from northern mountainous region at low altitudes. In this study, descriptions, line drawings, color photos and a distribution map of the two species are provided.

It is the time for oceanic seabirds: Tracking year-round distribution of gadfly petrels across the Atlantic Ocean

Science.gov (United States)

Ramos, Raul; Carlile, Nicholas; Madeiros, Jeremy; Ramirez, Ivan; Paiva, Vitor H.; Dinis, Herculano A.; Zino, Francis; Biscoito, Manuel; Leal, Gustavo R.; Bugoni, Leandro; Jodice, Patrick G.R.; Ryan, Peter G.; Gonzalez-Solis, Jacob

2017-01-01

AimAnthropogenic activities alter and constrain the structure of marine ecosystems with implications for wide-ranging marine vertebrates. In spite of the environmental importance of vast oceanic ecosystems, most conservation efforts mainly focus on neritic areas. To identify relevant oceanic areas for conservation, we assessed the year-round spatial distribution and spatio-temporal overlap of eight truly oceanic seabird species of gadfly petrels (Pterodroma spp.) inhabiting the Atlantic Ocean.LocationAtlantic Ocean.MethodsUsing tracking data (mostly from geolocators), we examined year-round distributions, the timing of life-cycle events, and marine habitat overlap of eight gadfly petrel species that breed in the Atlantic Ocean.ResultsWe compiled 125 year-round tracks. Movement strategies ranged from non-migratory to long-distance migrant species and from species sharing a common non-breeding area to species dispersing among multiple non-breeding sites. Gadfly petrels occurred throughout the Atlantic Ocean but tended to concentrate in subtropical regions. During the boreal summer, up to three species overlapped spatio-temporally over a large area around the Azores archipelago. During the austral summer, up to four species coincided in a core area in subtropical waters around Cape Verde, and three species shared habitat over two distinct areas off Brazil. The petrels used many national Exclusive Economic Zones, although they also exploited offshore international waters.Main conclusionsTracking movements of highly mobile vertebrates such as gadfly petrels can provide a powerful tool to evaluate and assess the potential need for and location of protected oceanic areas. As more multispecies, year-round data sets are collected from wide-ranging vertebrates, researchers and managers will have greater insight into the location of biodiversity hotspots. These can subsequently inform and guide marine spatial planning efforts that account for both conservation and

Hydraena Kugelann, 1794 (Coleoptera, Hydraenidae from the Seychelles, Indian Ocean, with description of a new species

Directory of Open Access Journals (Sweden)

Manfred A. Jäch

2016-10-01

Full Text Available Hydraena matyoti sp. n. (Coleoptera, Hydraenidae is described from the Seychelles, Indian Ocean. Hydraena mahensis Scott, 1913 is redescribed. The latter is here recorded from La Digue for the first time. A key to the species of the genus Hydraena Kugelann, 1794 of the Seychelles is presented.

Metagenomic approach for discovering new pathogens in infection disease outbreaks

Directory of Open Access Journals (Sweden)

Emanuela Giombini

2011-09-01

Full Text Available Viruses represent the most abundant biological components on earth.They can be found in every environment, from deep layers of oceans to animal bodies.Although several viruses have been isolated and sequenced, in each environment there are millions of different types of viruses that have not been identified yet.The advent of nextgeneration sequencing technologies with their high throughput capabilities make possible to study in a single experiment all the community of microorganisms present in a particular sample “microbioma”.They made more feasible the application of the metagenomic approach, by which it is also possible to discover and identify new pathogens, that may pose a threat to public health.This paper summarizes the most recent applications of nextgeneration sequencing to discover new viral pathogens during the occurrence of infection disease outbreaks.

Two Newly Discovered Plants in Taiwan

Directory of Open Access Journals (Sweden)

Tian-Chuan Hsu

2009-11-01

Full Text Available Two herbs are newly discovered in Taiwan. Limnophila fragrans (G. Forst. Seem. (Scrophulariaceae, native in SE Asia, is recognized from southern lowlands. Anagallis minima (L. E. H. L. Krause (Primulaceae, native in N America and Europe, was found from northern mountainous region at low altitudes. In this study, descriptions, line drawings, color photos and a distribution map of the two species are provided.

Service design as an approach for recognizing blue ocean

OpenAIRE

Koskelo, Minna

2013-01-01

This thesis aims to show that service design as an approach can be utilized for discovering new market space, referred as blue ocean and new business opportunities, and thus to show that service design can be seen as an approach for bringing the new logic for value creation into strategic level. From the field of strategic management the theory of blue ocean strategy was chosen for presenting the strategic outcome and further since there are similarities be-tween blue ocean strategy approach ...

Newly Discovered Orangutan Species Requires Urgent Habitat Protection.

Science.gov (United States)

Sloan, Sean; Supriatna, Jatna; Campbell, Mason J; Alamgir, Mohammed; Laurance, William F

2018-05-03

Nater, et al.[1] recently identified a new orangutan species (Pongo tapanuliensis) in northern Sumatra, Indonesia-just the seventh described species of living great ape. The population of this critically-endangered species is perilously small, at only ∼800 individuals [1], ranking it among the planet's rarest fauna. We assert that P. tapanuliensis is highly vulnerable to extinction because its remaining habitat is small, fragmented, and poorly protected. While road incursions within its habitat are modest-road density is only one-eighth that of northern Sumatra-over one-fifth of its habitat is zoned for agricultural conversion or is comprised of mosaic agricultural and regrowth/degraded forest. Additionally, a further 8% will be affected by flooding and infrastructure development for a hydroelectric project. We recommend urgent steps to increase the chance that P. tapanuliensis will persist in the wild. Copyright © 2018 Elsevier Ltd. All rights reserved.

Rapid Evolutionary Rates and Unique Genomic Signatures Discovered in the First Reference Genome for the Southern Ocean Salp, Salpa thompsoni (Urochordata, Thaliacea).

Science.gov (United States)

Jue, Nathaniel K; Batta-Lona, Paola G; Trusiak, Sarah; Obergfell, Craig; Bucklin, Ann; O'Neill, Michael J; O'Neill, Rachel J

2016-10-30

A preliminary genome sequence has been assembled for the Southern Ocean salp, Salpa thompsoni (Urochordata, Thaliacea). Despite the ecological importance of this species in Antarctic pelagic food webs and its potential role as an indicator of changing Southern Ocean ecosystems in response to climate change, no genomic resources are available for S. thompsoni or any closely related urochordate species. Using a multiple-platform, multiple-individual approach, we have produced a 318,767,936-bp genome sequence, covering >50% of the estimated 602 Mb (±173 Mb) genome size for S. thompsoni Using a nonredundant set of predicted proteins, >50% (16,823) of sequences showed significant homology to known proteins and ∼38% (12,151) of the total protein predictions were associated with Gene Ontology functional information. We have generated 109,958 SNP variant and 9,782 indel predictions for this species, serving as a resource for future phylogenomic and population genetic studies. Comparing the salp genome to available assemblies for four other urochordates, Botryllus schlosseri, Ciona intestinalis, Ciona savignyi and Oikopleura dioica, we found that S. thompsoni shares the previously estimated rapid rates of evolution for these species. High mutation rates are thus independent of genome size, suggesting that rates of evolution >1.5 times that observed for vertebrates are a broad taxonomic characteristic of urochordates. Tests for positive selection implemented in PAML revealed a small number of genes with sites undergoing rapid evolution, including genes involved in ribosome biogenesis and metabolic and immune process that may be reflective of both adaptation to polar, planktonic environments as well as the complex life history of the salps. Finally, we performed an initial survey of small RNAs, revealing the presence of known, conserved miRNAs, as well as novel miRNA genes; unique piRNAs; and mature miRNA signatures for varying developmental stages. Collectively, these

Rapid forest clearing in a Myanmar proposed national park threatens two newly discovered species of geckos (Gekkonidae: Cyrtodactylus.

Directory of Open Access Journals (Sweden)

Grant M Connette

Full Text Available Myanmar's recent transition from military rule towards a more democratic government has largely ended decades of political and economic isolation. Although Myanmar remains heavily forested, increased development in recent years has been accompanied by exceptionally high rates of forest loss. In this study, we document the rapid progression of deforestation in and around the proposed Lenya National Park, which includes some of the largest remaining areas of lowland evergreen rainforest in mainland Southeast Asia. The globally unique forests in this area are rich in biodiversity and remain a critical stronghold for many threatened and endangered species, including large charismatic fauna such as tiger and Asian elephant. We also conducted a rapid assessment survey of the herpetofauna of the proposed national park, which resulted in the discovery of two new species of bent-toed geckos, genus Cyrtodactylus. We describe these new species, C. lenya sp. nov. and C. payarhtanensis sp. nov., which were found in association with karst (i.e., limestone rock formations within mature lowland wet evergreen forest. The two species were discovered less than 35 km apart and are each known from only a single locality. Because of the isolated nature of the karst formations in the proposed Lenya National Park, these geckos likely have geographical ranges restricted to the proposed protected area and are threatened by approaching deforestation. Although lowland evergreen rainforest has vanished from most of continental Southeast Asia, Myanmar can still take decisive action to preserve one of the most biodiverse places on Earth.

Rapid forest clearing in a Myanmar proposed national park threatens two newly discovered species of geckos (Gekkonidae: Cyrtodactylus).

Science.gov (United States)

Connette, Grant M; Oswald, Patrick; Thura, Myint Kyaw; LaJeunesse Connette, Katherine J; Grindley, Mark E; Songer, Melissa; Zug, George R; Mulcahy, Daniel G

2017-01-01

Myanmar's recent transition from military rule towards a more democratic government has largely ended decades of political and economic isolation. Although Myanmar remains heavily forested, increased development in recent years has been accompanied by exceptionally high rates of forest loss. In this study, we document the rapid progression of deforestation in and around the proposed Lenya National Park, which includes some of the largest remaining areas of lowland evergreen rainforest in mainland Southeast Asia. The globally unique forests in this area are rich in biodiversity and remain a critical stronghold for many threatened and endangered species, including large charismatic fauna such as tiger and Asian elephant. We also conducted a rapid assessment survey of the herpetofauna of the proposed national park, which resulted in the discovery of two new species of bent-toed geckos, genus Cyrtodactylus. We describe these new species, C. lenya sp. nov. and C. payarhtanensis sp. nov., which were found in association with karst (i.e., limestone) rock formations within mature lowland wet evergreen forest. The two species were discovered less than 35 km apart and are each known from only a single locality. Because of the isolated nature of the karst formations in the proposed Lenya National Park, these geckos likely have geographical ranges restricted to the proposed protected area and are threatened by approaching deforestation. Although lowland evergreen rainforest has vanished from most of continental Southeast Asia, Myanmar can still take decisive action to preserve one of the most biodiverse places on Earth.

Revision of the genus Cuvierina Boas, 1886 based on integrative taxonomic data, including the description of a new species from the Pacific Ocean (Gastropoda, Thecosomata).

Science.gov (United States)

Burridge, Alice K; Janssen, Arie W; Peijnenburg, Katja T C A

2016-01-01

Shelled pteropods (Gastropoda, Thecosomata, Euthecosomata) are a group of holoplanktonic gastropods that occur predominantly in the surface layers of the world's oceans. Accurate species identifications are essential for tracking changes in species assemblages of planktonic gastropods, because different species are expected to have different sensitivities to ocean changes. The genus Cuvierina has a worldwide warm water distribution pattern between ~36°N and ~39°S. Based on an integrative taxonomic approach combining morphometric, genetic, and biogeographic information, the two subgenera of Cuvierina , Cuvierina s. str. and Urceolarica , are rejected. A new species is introduced: Cuvierina tsudai sp. n. , which has to date been considered the same species as Cuvierina pacifica . Cuvierina tsudai sp. n. is endemic to the Pacific Ocean and is characterised by a shell height of 7.2-8.0 mm, a moderately cylindrical shell shape, the absence of micro-ornamentation and a triangular aperture. Cuvierina pacifica is restricted to the centre of the oligotrophic southern Pacific gyre, has a shell height of 6.6-8.5 mm, a more cylindrical shell shape, no micro-ornamentation and a less triangular aperture than Cuvierina tsudai sp. n.

Economics of ocean ranching: experiences, outlook and theory

National Research Council Canada - National Science Library

Ragnar Arnason

2001-01-01

"The author distinguishes between ocean fish farming and ocean ranching. The distinguishing characteristic of ocean ranching is that the released species are unassisted once released into the ocean...

Differential response of two Mediterranean cold-water coral species to ocean acidification

Science.gov (United States)

Movilla, Juancho; Orejas, Covadonga; Calvo, Eva; Gori, Andrea; López-Sanz, Àngel; Grinyó, Jordi; Domínguez-Carrió, Carlos; Pelejero, Carles

2014-09-01

Cold-water coral (CWC) reefs constitute one of the most complex deep-sea habitats harboring a vast diversity of associated species. Like other tropical or temperate framework builders, these systems are facing an uncertain future due to several threats, such as global warming and ocean acidification. In the case of Mediterranean CWC communities, the effect may be exacerbated due to the greater capacity of these waters to absorb atmospheric CO2 compared to the global ocean. Calcification in these organisms is an energy-demanding process, and it is expected that energy requirements will be greater as seawater pH and the availability of carbonate ions decrease. Therefore, studies assessing the effect of a pH decrease in skeletal growth, and metabolic balance are critical to fully understand the potential responses of these organisms under a changing scenario. In this context, the present work aims to investigate the medium- to long-term effect of a low pH scenario on calcification and the biochemical composition of two CWCs from the Mediterranean, Dendrophyllia cornigera and Desmophyllum dianthus. After 314 d of exposure to acidified conditions, a significant decrease of 70 % was observed in Desmophyllum dianthus skeletal growth rate, while Dendrophyllia cornigera showed no differences between treatments. Instead, only subtle differences between treatments were observed in the organic matter amount, lipid content, skeletal microdensity, or porosity in both species, although due to the high variability of the results, these differences were not statistically significant. Our results also confirmed a heterogeneous effect of low pH on the skeletal growth rate of the organisms depending on their initial weight, suggesting that those specimens with high calcification rates may be the most susceptible to the negative effects of acidification.

Diversity and distribution of symbiodinium associated with seven common coral species in the Chagos Archipelago, central Indian Ocean.

Directory of Open Access Journals (Sweden)

Sung-Yin Yang

Full Text Available The Chagos Archipelago designated as a no-take marine protected area in 2010, lying about 500 km south of the Maldives in the Indian Ocean, has a high conservation priority, particularly because of its fast recovery from the ocean-wide massive coral mortality following the 1998 coral bleaching event. The aims of this study were to examine Symbiodinium diversity and distribution associated with scleractinian corals in five atolls of the Chagos Archipelago, spread over 10,000 km(2. Symbiodinium clade diversity in 262 samples of seven common coral species, Acropora muricata, Isopora palifera, Pocillopora damicornis, P. verrucosa, P. eydouxi, Seriatopora hystrix, and Stylophora pistillata were determined using PCR-SSCP of the ribosomal internal transcribed spacer 1 (ITS1, PCR-DDGE of ITS2, and phylogenetic analyses. The results indicated that Symbiodinium in clade C were the dominant symbiont group in the seven coral species. Our analysis revealed types of Symbiodinium clade C specific to coral species. Types C1 and C3 (with C3z and C3i variants were dominant in Acroporidae and C1 and C1c were the dominant types in Pocilloporidae. We also found 2 novel ITS2 types in S. hystrix and 1 novel ITS2 type of Symbiodinium in A. muricata. Some colonies of A. muricata and I. palifera were also associated with Symbiodinium A1. These results suggest that corals in the Chagos Archipelago host different assemblages of Symbiodinium types then their conspecifics from other locations in the Indian Ocean; and that future research will show whether these patterns in Symbiodinium genotypes may be due to local adaptation to specific conditions in the Chagos.

Holodiscus (K. Koch) Maxim.: ocean-spray

Science.gov (United States)

Nancy L. Shaw; Emerenciana G. Hurd; Peter F. Stickney

2008-01-01

Holodiscus is a taxonomically complex genus including about 6 species of western North America and northern South America (Hitchcock and others 1961; Ley 1943). The 2 generally recognized North American species (table 1) - creambush ocean-spray and gland ocean-spray - are deciduous, multistemmed shrubs with simple, alternate, deciduous, toothed to shallowly lobed,...

A hidden pygmy devil from the Philippines: Arulenus miae sp. nov.-a new species serendipitously discovered in an amateur Facebook post (Tetrigidae: Discotettiginae).

Science.gov (United States)

Skejo, Josip; Caballero, Joy Honezza S

2016-01-21

Arulenus miae Skejo & Caballero sp. nov. is described from Buknidon and Davao, Mindanao, the Philippines. The species was serendipitously found in an amateur photo posted in Orthoptera Facebook group by Leif Gabrielsen. Holotype and paratype are deposited in Nederlands Centrum voor Biodiversiteit in Leiden, the Netherlands. Detailed comparison with Arulenus validispinus Stål, 1877 is given. A new diagnosis of the genus and A. validispinus is given. The paper is part of the revision of the subfamily Discotettiginae. This study provides a good example of how social networks can be used as a modern tool of discovering biodiversity if the regulations of the International Code of the Zoological Nomenclature are followed. A brief insight into habitat and ecology of this rainforest and mountainous species is presented.

Harnessing cross-species alignment to discover SNPs and generate a draft genome sequence of a bighorn sheep (Ovis canadensis).

Science.gov (United States)

Miller, Joshua M; Moore, Stephen S; Stothard, Paul; Liao, Xiaoping; Coltman, David W

2015-05-20

Whole genome sequences (WGS) have proliferated as sequencing technology continues to improve and costs decline. While many WGS of model or domestic organisms have been produced, a growing number of non-model species are also being sequenced. In the absence of a reference, construction of a genome sequence necessitates de novo assembly which may be beyond the ability of many labs due to the large volumes of raw sequence data and extensive bioinformatics required. In contrast, the presence of a reference WGS allows for alignment which is more tractable than assembly. Recent work has highlighted that the reference need not come from the same species, potentially enabling a wide array of species WGS to be constructed using cross-species alignment. Here we report on the creation a draft WGS from a single bighorn sheep (Ovis canadensis) using alignment to the closely related domestic sheep (Ovis aries). Two sequencing libraries on SOLiD platforms yielded over 865 million reads, and combined alignment to the domestic sheep reference resulted in a nearly complete sequence (95% coverage of the reference) at an average of 12x read depth (104 SD). From this we discovered over 15 million variants and annotated them relative to the domestic sheep reference. We then conducted an enrichment analysis of those SNPs showing fixed differences between the reference and sequenced individual and found significant differences in a number of gene ontology (GO) terms, including those associated with reproduction, muscle properties, and bone deposition. Our results demonstrate that cross-species alignment enables the creation of novel WGS for non-model organisms. The bighorn sheep WGS will provide a resource for future resequencing studies or comparative genomics.

The effects of ocean acidification on hemocyte of crab species in Alaska from laboratory experiment studies from 2011-07-01 to 2013-07-06 (NODC Accession 0123400)

Data.gov (United States)

National Oceanic and Atmospheric Administration, Department of Commerce — This archival package contains laboratory experiment data that were collected to examine the effects of ocean acidification on hemocyte of crab species in Alaska....

Large predatory coral trout species unlikely to meet increasing energetic demands in a warming ocean

KAUST Repository

Johansen, J.L.

2015-09-08

Increased ocean temperature due to climate change is raising metabolic demands and energy requirements of marine ectotherms. If productivity of marine systems and fisheries are to persist, individual species must compensate for this demand through increasing energy acquisition or decreasing energy expenditure. Here we reveal that the most important coral reef fishery species in the Indo-west Pacific, the large predatory coral trout Plectropomus leopardus (Serranidae), can behaviourally adjust food intake to maintain body-condition under elevated temperatures, and acclimate over time to consume larger meals. However, these increased energetic demands are unlikely to be met by adequate production at lower trophic levels, as smaller prey species are often the first to decline in response to climate-induced loss of live coral and structural complexity. Consequently, ubiquitous increases in energy consumption due to climate change will increase top-down competition for a dwindling biomass of prey, potentially distorting entire food webs and associated fisheries.

Large predatory coral trout species unlikely to meet increasing energetic demands in a warming ocean

KAUST Repository

Johansen, J.L.; Pratchett, M.S.; Messmer, V.; Coker, Darren James; Tobin, A.J.; Hoey, A.S.

2015-01-01

Increased ocean temperature due to climate change is raising metabolic demands and energy requirements of marine ectotherms. If productivity of marine systems and fisheries are to persist, individual species must compensate for this demand through increasing energy acquisition or decreasing energy expenditure. Here we reveal that the most important coral reef fishery species in the Indo-west Pacific, the large predatory coral trout Plectropomus leopardus (Serranidae), can behaviourally adjust food intake to maintain body-condition under elevated temperatures, and acclimate over time to consume larger meals. However, these increased energetic demands are unlikely to be met by adequate production at lower trophic levels, as smaller prey species are often the first to decline in response to climate-induced loss of live coral and structural complexity. Consequently, ubiquitous increases in energy consumption due to climate change will increase top-down competition for a dwindling biomass of prey, potentially distorting entire food webs and associated fisheries.

International Ocean Symposium (IOS) 1996; Kokusai kaiyo symposium 1996

Energy Technology Data Exchange (ETDEWEB)

NONE

1997-02-18

This is a proceedings of the International Ocean Symposium 1996. On the first day of the symposium, the following were given with a theme `The Ocean, Can She Save Us`: Underwater research and future of mankind as a commemorative speech; The ocean, can she save us -- trying to discover the true figure of the ocean as a keynote speech. Panel discussion was held on The global environment and the infinite potential of the ocean. On the second day, an approach was made mostly from a cultural aspect with a theme `The Ocean and the Japanese.` The following were given: Human links between east and west as a commemorative speech; The ocean and Japanese culture as a keynote speech; Civilization spanning across oceans as a panel discussion. The Japanese have been developing their individual technologies in shipbuilding, shipping, and ocean development, have been raised by Mother Ocean, and have lived together. Ocean has been supplying humans food, water, oxygen, marine routes, and even dream and hope. The environmental pollution is the result of the human greediness. It is fear and friendship between humans and ocean that can save humans and ocean.

Pigment species, depth, and pressure data from bottle and CTD casts in the North Atlantic Ocean as part of the Joint Global Ocean Flux Study / Time Series Site "BATS" (JGOFS/BATS) project, from 1993-10-01 to 1996-12-31 (NODC Accession 9800186)

Data.gov (United States)

National Oceanic and Atmospheric Administration, Department of Commerce — Pigment species, depth, and pressure data were collected using bottle and CTD casts from the R/V WEATHERBIRD in the North Atlantic Ocean from October 1, 1993 to...

New perspectives in ocean acidification research: editor's introduction to the special feature on ocean acidification.

Science.gov (United States)

Munday, Philip L

2017-09-01

Ocean acidification, caused by the uptake of additional carbon dioxide (CO 2 ) from the atmosphere, will have far-reaching impacts on marine ecosystems (Gattuso & Hansson 2011 Ocean acidification Oxford University Press). The predicted changes in ocean chemistry will affect whole biological communities and will occur within the context of global warming and other anthropogenic stressors; yet much of the biological research conducted to date has tested the short-term responses of single species to ocean acidification conditions alone. While an important starting point, these studies may have limited predictive power because they do not account for possible interactive effects of multiple climate change drivers or for ecological interactions with other species. Furthermore, few studies have considered variation in responses among populations or the evolutionary potential within populations. Therefore, our knowledge about the potential for marine organisms to adapt to ocean acidification is extremely limited. In 2015, two of the pioneers in the field, Ulf Riebesell and Jean-Pierre Gattuso, noted that to move forward as a field of study, future research needed to address critical knowledge gaps in three major areas: (i) multiple environmental drivers, (ii) ecological interactions and (iii) acclimation and adaptation (Riebesell and Gattuso 2015 Nat. Clim. Change 5 , 12-14 (doi:10.1038/nclimate2456)). In May 2016, more than 350 researchers, students and stakeholders met at the 4th International Symposium on the Ocean in a High-CO 2 World in Hobart, Tasmania, to discuss the latest advances in understanding ocean acidification and its biological consequences. Many of the papers presented at the symposium reflected this shift in focus from short-term, single species and single stressor experiments towards multi-stressor and multispecies experiments that address knowledge gaps about the ecological impacts of ocean acidification on marine communities. The nine papers in this

Can trans-generational experiments be used to enhance species resilience to ocean warming and acidification?

Science.gov (United States)

Chakravarti, Leela J; Jarrold, Michael D; Gibbin, Emma M; Christen, Felix; Massamba-N'Siala, Gloria; Blier, Pierre U; Calosi, Piero

2016-10-01

Human-assisted, trans-generational exposure to ocean warming and acidification has been proposed as a conservation and/or restoration tool to produce resilient offspring. To improve our understanding of the need for and the efficacy of this approach, we characterized life-history and physiological responses in offspring of the marine polychaete Ophryotrocha labronica exposed to predicted ocean warming (OW: + 3°C), ocean acidification (OA: pH -0.5) and their combination (OWA: + 3°C, pH -0.5), following the exposure of their parents to either control conditions ( within-generational exposure ) or the same conditions ( trans-generational exposure ). Trans-generational exposure to OW fully alleviated the negative effects of within-generational exposure to OW on fecundity and egg volume and was accompanied by increased metabolic activity. While within-generational exposure to OA reduced juvenile growth rates and egg volume, trans-generational exposure alleviated the former but could not restore the latter. Surprisingly, exposure to OWA had no negative impacts within- or trans-generationally. Our results highlight the potential for trans-generational laboratory experiments in producing offspring that are resilient to OW and OA. However, trans-generational exposure does not always appear to improve traits and therefore may not be a universally useful tool for all species in the face of global change.

Ocean acidification

International Nuclear Information System (INIS)

Soubelet, Helene; Veyre, Philippe; Monnoyer-Smith, Laurence

2017-09-01

This brief publication first recalls and outlines that ocean acidification is expected to increase, and will result in severe ecological impacts (more fragile coral reefs, migration of species, and so on), and therefore social and economic impacts. This issue is particularly important for France who possesses the second exclusive maritime area in the world. The various impacts of ocean acidification on living species is described, notably for phytoplankton, coral reefs, algae, molluscs, and fishes. Social and economic impacts are also briefly presented: tourism, protection against risks (notably by coral reefs), shellfish aquaculture and fishing. Issues to be addressed by scientific research are evoked: interaction between elements of an ecosystem and between different ecosystems, multi-stress effects all along organism lifetime, vulnerability and adaptability of human societies

Three new species and the molecular phylogeny of Antipathozoanthus from the Indo-Pacific Ocean (Anthozoa, Hexacorallia, Zoantharia).

Science.gov (United States)

Kise, Hiroki; Fujii, Takuma; Masucci, Giovanni Diego; Biondi, Piera; Reimer, James Davis

2017-01-01

In this study, three new species of macrocnemic zoantharians (Hexacorallia, Zoantharia) are described from localities in the Indo-Pacific Ocean including the Red Sea, the Maldives, Palau, and southern Japan: Antipathozoanthus obscurus sp. n. , A. remengesaui sp. n. , and A. cavernus sp. n. Although the genus Antipathozoanthus is currently restricted to species living on antipatharians, A. obscurus sp. n. is not associated with any living substrate and instead is found on coral reef carbonate substrate within narrow caves or cracks. The two new species that have association with antipatharians, A. remengesaui sp. n. and A. cavernus sp. n. , can be distinguished by their relative coenenchyme development and the antipatharian species that each uses as substrate. Additionally, all new species described in this study have unique nuclear internal transcribed spacer region of ribosomal DNA (ITS-rDNA) sequences. Our results indicate that more phylogenetic studies focusing on increasing the numbers of species examined within each of the genera of Parazoanthidae are required in order to better understand the evolutionary history of substrate specificity within the family Parazoanthidae.

Three new species and the molecular phylogeny of Antipathozoanthus from the Indo-Pacific Ocean (Anthozoa, Hexacorallia, Zoantharia

Directory of Open Access Journals (Sweden)

Hiroki Kise

2017-12-01

Full Text Available In this study, three new species of macrocnemic zoantharians (Hexacorallia, Zoantharia are described from localities in the Indo-Pacific Ocean including the Red Sea, the Maldives, Palau, and southern Japan: Antipathozoanthus obscurus sp. n., A. remengesaui sp. n., and A. cavernus sp. n. Although the genus Antipathozoanthus is currently restricted to species living on antipatharians, A. obscurus sp. n. is not associated with any living substrate and instead is found on coral reef carbonate substrate within narrow caves or cracks. The two new species that have association with antipatharians, A. remengesaui sp. n. and A. cavernus sp. n., can be distinguished by their relative coenenchyme development and the antipatharian species that each uses as substrate. Additionally, all new species described in this study have unique nuclear internal transcribed spacer region of ribosomal DNA (ITS-rDNA sequences. Our results indicate that more phylogenetic studies focusing on increasing the numbers of species examined within each of the genera of Parazoanthidae are required in order to better understand the evolutionary history of substrate specificity within the family Parazoanthidae.

A new species of the remarkable brittle star genus Astrophiura (Echinodermata: Ophiuroidea) from the western Atlantic Ocean.

Science.gov (United States)

Pawson, David L

2018-02-07

Astrophiura caroleae, new species, is described from off Curacao in the southern Caribbean, and from the western Gulf of Mexico, in depths of 244 to 434 meters. This new species, the first in the genus Astrophiura to be described from the Atlantic Ocean, has a distinctive combination of characters, including regularly arranged primary plates, large radial shields whose radial edges are in contact for their entire visible length, and prominent tubercles on central and radial plates. The mottled reddish coloration of the dorsal surface of this species usually contrasts with the color of the substratum, rendering it readily visible in situ, despite its disc diameter of less than 10 mm. Like its congeners, A. caroleae is gonochoric, the gonads of females containing conspicuous masses of bright orange eggs that are approximately 165 µm in diameter. DNA Barcoding data are provided for this new species, these are the first for Astrophiura.

Zoogeography of the Indian Ocean

Digital Repository Service at National Institute of Oceanography (India)

Rao, T.S.S.

The distribution pattern of zooplankton in the Indian Ocean is briefly reviewed on a within and between ocean patterns and is limited to species within a quite restricted sort of groups namely, Copepoda, Chaetognatha, Pteropoda and Euphausiacea...

A new genus and species of deep-sea glass sponge (Porifera, Hexactinellida, Aulocalycidae) from the Indian Ocean

OpenAIRE

Sautya, Sabyasachi; Tabachnick, Konstantin R.; Ingole, Baban

2011-01-01

Abstract New hexactinellid sponges were collected from 2589 m depth on the Carlsberg Ridge in the Indian Ocean during deep-sea dredging. All fragments belong to a new genus and species, Indiella gen. n. ridgenensis sp. n., a representative of the family Aulocalycidae described here. The peculiar features of this sponge, not described earlier for other Aulocalycidae, are: longitudinal strands present in several layers and epirhyses channelization.

A new genus and species of deep-sea glass sponge (Porifera, Hexactinellida, Aulocalycidae) from the Indian Ocean.

Science.gov (United States)

Sautya, Sabyasachi; Tabachnick, Konstantin R; Ingole, Baban

2011-01-01

New hexactinellid sponges were collected from 2589 m depth on the Carlsberg Ridge in the Indian Ocean during deep-sea dredging. All fragments belong to a new genus and species, Indiellagen. n.ridgenensissp. n., a representative of the family Aulocalycidae described here. The peculiar features of this sponge, not described earlier for other Aulocalycidae, are: longitudinal strands present in several layers and epirhyses channelization.

Zooplankton species identification and counts data from drifting station ARLIS II and Fletchers ice island T-3 in the Arctic Ocean from 19521229 to 19680129 (NODC Accession 6900643)

Data.gov (United States)

National Oceanic and Atmospheric Administration, Department of Commerce — These data are counts of 3 copepod species collected during plankton tows in the Arctic Ocean from December 1952 through January 1968 by the University of...

Phylogeography of the crown-of-thorns starfish in the Indian Ocean.

Directory of Open Access Journals (Sweden)

Catherine Vogler

Full Text Available Understanding the limits and population dynamics of closely related sibling species in the marine realm is particularly relevant in organisms that require management. The crown-of-thorns starfish Acanthaster planci, recently shown to be a species complex of at least four closely related species, is a coral predator infamous for its outbreaks that have devastated reefs throughout much of its Indo-Pacific distribution.In this first Indian Ocean-wide genetic study of a marine organism we investigated the genetic structure and inferred the paleohistory of the two Indian Ocean sister-species of Acanthaster planci using mitochondrial DNA sequence analyses. We suggest that the first of two main diversification events led to the formation of a Southern and Northern Indian Ocean sister-species in the late Pliocene-early Pleistocene. The second led to the formation of two internal clades within each species around the onset of the last interglacial. The subsequent demographic history of the two lineages strongly differed, the Southern Indian Ocean sister-species showing a signature of recent population expansion and hardly any regional structure, whereas the Northern Indian Ocean sister-species apparently maintained a constant size with highly differentiated regional groupings that were asymmetrically connected by gene flow.Past and present surface circulation patterns in conjunction with ocean primary productivity were identified as the processes most likely to have shaped the genetic structure between and within the two Indian Ocean lineages. This knowledge will help to understand the biological or ecological differences of the two sibling species and therefore aid in developing strategies to manage population outbreaks of this coral predator in the Indian Ocean.

Preliminary report on the geographical distribution of the species of Carinariidae and Pterotracheidae (Heteropoda, Mollusca) from the International Indian Ocean Expedition

Digital Repository Service at National Institute of Oceanography (India)

Aravindakshan, P.N.

This is a description of the distribution in the Indian Ocean of species belonging to two families of the Heteropoda, the Carinariidae and Pterotracheidae The observations are based on plankton collected by Anton Brunn, Argo, Pionner and Vityaz...

Puget Sound ocean acidification model outputs - Modeling the impacts of ocean acidification on ecosystems and populations

Data.gov (United States)

National Oceanic and Atmospheric Administration, Department of Commerce — The NWFSC OA team will model the effects of ocean acidification on regional marine species and ecosystems using food web models, life-cycle models, and bioenvelope...

An online conserved SSR discovery through cross-species comparison

Directory of Open Access Journals (Sweden)

Tun-Wen Pai

2009-02-01

Full Text Available Tun-Wen Pai1, Chien-Ming Chen1, Meng-Chang Hsiao1, Ronshan Cheng2, Wen-Shyong Tzou3, Chin-Hua Hu31Department of Computer Science and Engineering; 2Department of Aquaculture, 3Institute of Bioscience and Biotechnology, National Taiwan Ocean University, Keelung, Taiwan, Republic of ChinaAbstract: Simple sequence repeats (SSRs play important roles in gene regulation and genome evolution. Although there exist several online resources for SSR mining, most of them only extract general SSR patterns without providing functional information. Here, an online search tool, CG-SSR (Comparative Genomics SSR discovery, has been developed for discovering potential functional SSRs from vertebrate genomes through cross-species comparison. In addition to revealing SSR candidates in conserved regions among various species, it also combines accurate coordinate and functional genomics information. CG-SSR is the first comprehensive and efficient online tool for conserved SSR discovery.Keywords: microsatellites, genome, comparative genomics, functional SSR, gene ontology, conserved region

Temperature, salinity, species identification, nutrient profiles and meteorological data collected by bottle and net in the Northwest Pacific Ocean from 6/10/1975 - 8/5/1975 (NODC Accession 0000194)

Data.gov (United States)

National Oceanic and Atmospheric Administration, Department of Commerce — Temperature profile, nutrients, species identification, and other data were collected using net and bottle casts from the RYOFU MARU in the Northwest Pacific Ocean....

Environmental science: Oceans lose oxygen

Science.gov (United States)

Gilbert, Denis

2017-02-01

Oxygen is essential to most life in the ocean. An analysis shows that oxygen levels have declined by 2% in the global ocean over the past five decades, probably causing habitat loss for many fish and invertebrate species. See Letter p.335

A new genus and species of deep-sea glass sponge (Porifera, Hexactinellida, Aulocalycidae from the Indian Ocean

Directory of Open Access Journals (Sweden)

Sabyasachi Sautya

2011-10-01

Full Text Available New hexactinellid sponges were collected from 2589 m depth on the Carlsberg Ridge in the Indian Ocean during deep-sea dredging. All fragments belong to a new genus and species, Indiella gen. n. ridgenensis sp. n., a representative of the family Aulocalycidae described here. The peculiar features of this sponge, not described earlier for other Aulocalycidae, are: longitudinal strands present in several layers and epirhyses channelization.

Investigations of a novel fauna from hydrothermal vents along the Arctic Mid-Ocean Ridge (AMOR) (Invited)

Science.gov (United States)

Rapp, H.; Schander, C.; Halanych, K. M.; Levin, L. A.; Sweetman, A.; Tverberg, J.; Hoem, S.; Steen, I.; Thorseth, I. H.; Pedersen, R.

2010-12-01

The Arctic deep ocean hosts a variety of habitats ranging from fairly uniform sedimentary abyssal plains to highly variable hard bottoms on mid ocean ridges, including biodiversity hotspots like seamounts and hydrothermal vents. Deep-sea hydrothermal vents are usually associated with a highly specialized fauna, and since their discovery in 1977 more than 400 species of animals have been described. This fauna includes various animal groups of which the most conspicuous and well known are annelids, mollusks and crustaceans. The newly discovered deep sea hydrothermal vents on the Mohns-Knipovich ridge north of Iceland harbour unique biodiversity. The Jan Mayen field consists of two main areas with high-temperature white smoker venting and wide areas with low-temperature seepage, located at 5-700 m, while the deeper Loki Castle vent field at 2400 m depth consists of a large area with high temperature black smokers surrounded by a sedimentary area with more diffuse low-temperature venting and barite chimneys. The Jan Mayen sites show low abundance of specialized hydrothermal vent fauna. Single groups have a few specialized representatives but groups otherwise common in hydrothermal vent areas are absent. Slightly more than 200 macrofaunal species have been identified from this vent area, comprising mainly an assortment of bathyal species known from the surrounding area. Analysis of stable isotope data also indicates that the majority of the species present are feeding on phytodetritus and/or phytoplankton. However, the deeper Loki Castle vent field contains a much more diverse vent endemic fauna with high abundances of specialized polychaetes, gastropods and amphipods. These specializations also include symbioses with a range of chemosynthetic microorganisms. Our data show that the fauna composition is a result of high degree of local specialization with some similarities to the fauna of cold seeps along the Norwegian margin and wood-falls in the abyssal Norwegian Sea

THE PITFALLS OF THE BLUE OCEAN STRATEGY CANVAS

DEFF Research Database (Denmark)

Lindgren, Peter; Saghaug, Kristin Margrethe; Clemmensen, Suberia

2009-01-01

Numerous authors have developed a list of tactics and analyticaltechniques to discover new business or new business models (Markides2008)(Johnson 2008). The Blue Ocean strategy (Kim & Mauborgne 2005)have been one of these - probably one of the most important analyticaltechniques related to the area...... of innovation and new business model (BM)innovation since 2005. Today many consultancies and managersresponsible for innovation use the Blue Ocean framework as one of theirtop 5 innovation tools.Wanting to accentuate the importance of analyzing the strategy canvascarefully, when generating new business models...... - it is important tounderstand the very foundation and construction of the strategy canvas -namely value.This paper addresses the question on How is value defined, measured andfrom which viewed in the Blue Ocean theory and framework. How is valuedefined and used by companies using the Blue Ocean strategy...

Brittle stars (Echinodermata: Ophiuroidea) from seamounts in the Andaman Sea (Indian Ocean): first account, with descriptions of new species

Digital Repository Service at National Institute of Oceanography (India)

Stohr, S.; Sautya, S.; Ingole, B.S.

and it is still the standard reference work on the subject. A recent census counted 319 species of ophiuroid for the Indian Ocean (Stöhr, O'Hara & Thuy, in press), about a quarter of them endemic to the region. By comparison, the same study found 831 species... of the first lateral arm plates. Up to 18 fringe spines in each interradius. Second tentacle pore slit-shaped, opening into the mouth slit, bordered by several low scales. No other tentacle scales along arm. Large round ventral spine articulation...

Plastic debris in the open ocean

KAUST Repository

Cozar, Andres

2014-06-30

There is a rising concern regarding the accumulation of floating plastic debris in the open ocean. However, the magnitude and the fate of this pollution are still open questions. Using data from the Malaspina 2010 circumnavigation, regional surveys, and previously published reports, we show a worldwide distribution of plastic on the surface of the open ocean, mostly accumulating in the convergence zones of each of the five subtropical gyres with comparable density. However, the global load of plastic on the open ocean surface was estimated to be on the order of tens of thousands of tons, far less than expected. Our observations of the size distribution of floating plastic debris point at important size-selective sinks removing millimeter-sized fragments of floating plastic on a large scale. This sink may involve a combination of fast nano-fragmentation of the microplastic into particles of microns or smaller, their transference to the ocean interior by food webs and ballasting processes, and processes yet to be discovered. Resolving the fate of the missing plastic debris is of fundamental importance to determine the nature and significance of the impacts of plastic pollution in the ocean.

Plastic debris in the open ocean.

Science.gov (United States)

Cózar, Andrés; Echevarría, Fidel; González-Gordillo, J Ignacio; Irigoien, Xabier; Ubeda, Bárbara; Hernández-León, Santiago; Palma, Alvaro T; Navarro, Sandra; García-de-Lomas, Juan; Ruiz, Andrea; Fernández-de-Puelles, María L; Duarte, Carlos M

2014-07-15

There is a rising concern regarding the accumulation of floating plastic debris in the open ocean. However, the magnitude and the fate of this pollution are still open questions. Using data from the Malaspina 2010 circumnavigation, regional surveys, and previously published reports, we show a worldwide distribution of plastic on the surface of the open ocean, mostly accumulating in the convergence zones of each of the five subtropical gyres with comparable density. However, the global load of plastic on the open ocean surface was estimated to be on the order of tens of thousands of tons, far less than expected. Our observations of the size distribution of floating plastic debris point at important size-selective sinks removing millimeter-sized fragments of floating plastic on a large scale. This sink may involve a combination of fast nano-fragmentation of the microplastic into particles of microns or smaller, their transference to the ocean interior by food webs and ballasting processes, and processes yet to be discovered. Resolving the fate of the missing plastic debris is of fundamental importance to determine the nature and significance of the impacts of plastic pollution in the ocean.

Plastic debris in the open ocean

Science.gov (United States)

Cózar, Andrés; Echevarría, Fidel; González-Gordillo, J. Ignacio; Irigoien, Xabier; Úbeda, Bárbara; Hernández-León, Santiago; Palma, Álvaro T.; Navarro, Sandra; García-de-Lomas, Juan; Ruiz, Andrea; Fernández-de-Puelles, María L.; Duarte, Carlos M.

2014-01-01

There is a rising concern regarding the accumulation of floating plastic debris in the open ocean. However, the magnitude and the fate of this pollution are still open questions. Using data from the Malaspina 2010 circumnavigation, regional surveys, and previously published reports, we show a worldwide distribution of plastic on the surface of the open ocean, mostly accumulating in the convergence zones of each of the five subtropical gyres with comparable density. However, the global load of plastic on the open ocean surface was estimated to be on the order of tens of thousands of tons, far less than expected. Our observations of the size distribution of floating plastic debris point at important size-selective sinks removing millimeter-sized fragments of floating plastic on a large scale. This sink may involve a combination of fast nano-fragmentation of the microplastic into particles of microns or smaller, their transference to the ocean interior by food webs and ballasting processes, and processes yet to be discovered. Resolving the fate of the missing plastic debris is of fundamental importance to determine the nature and significance of the impacts of plastic pollution in the ocean. PMID:24982135

Comparative study of salinity tolerance of an oceanic sea skater, Halobates micans and its closely related fresh water species, Metrocoris histrio

Czech Academy of Sciences Publication Activity Database

Sekimoto, T.; Osumi, Y.; Shiraki, T.; Kobayashi, A.; Emi, K.; Nakajo, M.; Moku, M.; Košťál, Vladimír; Katagiri, C.; Harada, T.

2014-01-01

Roč. 6, č. 14 (2014), s. 1141-1148 ISSN 2150-4091 Institutional support: RVO:60077344 Keywords : ocean ic sea skaters * fresh water halobatinae species * salinity tolerance Subject RIV: ED - Physiology http://www.scirp.org/journal/PaperInformation.aspx?PaperID=49746

Six new deep-water sternaspid species (Annelida, Sternaspidae from the Pacific Ocean

Directory of Open Access Journals (Sweden)

Sergio Salazar-Vallejo

2013-11-01

Full Text Available Most sternaspid species have been described from shallow water, and Caulleryaspis Sendall & Salazar-Vallejo, 2013 includes one deep water species: C. gudmundssoni Sendall & Salazar-Vallejo, 2013 from Iceland. In Sternaspis Otto, 1821, the most speciose genus, most species were described from shallow water and only three thrive in deep water: S. maior Chamberlin, 1919 from the Gulf of California, S. princeps Selenka, 1885 from New Zealand, and S. riestchi Caullery, 1944 from Indonesia. The study of some deep sea sternaspids from the Pacific Ocean in the collections of six research institutions resulted in the discovery of six undescribed species, and for three of them there were abundant materials showing ventro-caudal shield development. Caulleryaspis fauchaldi sp. n. is described based on specimens from Oregon and California; it differs from the known species because it has a shield with rounded anterior margins and its peg chaetae form thin, small spines. Caulleryaspis nuda sp. n. was collected off Oregon; it is unique because its shield lacks a layer of sediment particles firmly attached, but has instead a thin layer of small particles loosely attached. Four other species are newly described in Sternaspis: S. annenkovae sp. n. was collected east off the northern Kurile Islands in about 4,000 m depth; it differs from other species bya bicolored body, with the introvert darker than the abdomen, and its ventro-caudal shield plates are divergent resulting in a divided fan. The second species, S. maureri sp.n. was found off Peru in 1296–6489 m water depths and in the Southwestern Pacific in 795–3830 m; it resembles S. williamsae sp. n. but differs because its shield has better-developed ribs, the fan has a shallow or indistinct median notch and has lateral notches well-developed. The third species, S. uschakovi sp. n., was found in the Okhotsk Sea in 592–1366 m, off California in 1585 m, Gulf of California in 1200–1274 m, and Western

Six new deep-water sternaspid species (Annelida, Sternaspidae) from the Pacific Ocean.

Science.gov (United States)

Salazar-Vallejo, Sergio I; Buzhinskaja, Galina

2013-01-01

Most sternaspid species have been described from shallow water, and Caulleryaspis Sendall & Salazar-Vallejo, 2013 includes one deep water species: C. gudmundssoni Sendall & Salazar-Vallejo, 2013 from Iceland. In Sternaspis Otto, 1821, the most speciose genus, most species were described from shallow water and only three thrive in deep water: S. maior Chamberlin, 1919 from the Gulf of California, S. princeps Selenka, 1885 from New Zealand, and S. riestchi Caullery, 1944 from Indonesia. The study of some deep sea sternaspids from the Pacific Ocean in the collections of six research institutions resulted in the discovery of six undescribed species, and for three of them there were abundant materials showing ventro-caudal shield development. Caulleryaspis fauchaldi sp. n. is described based on specimens from Oregon and California; it differs from the known species because it has a shield with rounded anterior margins and its peg chaetae form thin, small spines. Caulleryaspis nuda sp. n. was collected off Oregon; it is unique because its shield lacks a layer of sediment particles firmly attached, but has instead a thin layer of small particles loosely attached. Four other species are newly described in Sternaspis: S. annenkovae sp. n. was collected east off the northern Kurile Islands in about 4,000 m depth; it differs from other species by having a bicolored body, with the introvert darker than the abdomen, and its ventro-caudal shield plates are divergent resulting in a divided fan. The second species, S. maureri sp. n. was found off Peru in 1296-6489 m water depths and in the Southwestern Pacific in 795-3830 m; it resembles S. williamsae sp. n. but differs because its shield has better-developed ribs, the fan has a shallow or indistinct median notch and has lateral notches well-developed. The third species, S. uschakovi sp. n., was found in the Okhotsk Sea in 592-1366 m, off California in 1585 m, Gulf of California in 1200-1274 m, and Western Mexico in 2548 m; it

Population differentiation or species formation across the Indian and the Pacific Oceans? An example from the brooding marine hydrozoan Macrorhynchia phoenicea.

Science.gov (United States)

Postaire, Bautisse; Gélin, Pauline; Bruggemann, J Henrich; Pratlong, Marine; Magalon, Hélène

2017-10-01

Assessing population connectivity is necessary to construct effective marine protected areas. This connectivity depends, among other parameters, inherently on species dispersal capacities. Isolation by distance (IBD) is one of the main modes of differentiation in marine species, above all in species presenting low dispersal abilities. This study reports the genetic structuring in the tropical hydrozoan Macrorhynchia phoenicea α ( sensu Postaire et al ., 2016a), a brooding species, from 30 sampling sites in the Western Indian Ocean and the Tropical Southwestern Pacific, using 15 microsatellite loci. At the local scale, genet dispersal relied on asexual propagation at short distance, which was not found at larger scales. Considering one representative per clone, significant positive F IS values (from -0.327*** to 0.411***) were found within almost all sites. Gene flow was extremely low at all spatial scales, among sites within islands (11,000 km distance), with significant pairwise F ST values (from 0.035*** to 0.645***). A general pattern of IBD was found at the Indo-Pacific scale, but also within ecoregions in the Western Indian Ocean province. Clustering and network analyses identified each island as a potential independent population, while analysis of molecular variance indicated that population genetic differentiation was significant at small (within island) and intermediate (among islands within province) spatial scales. As shown by this species, a brooding life cycle might be corollary of the high population differentiation found in some coastal marine species, thwarting regular dispersal at distances more than a few kilometers and probably leading to high cryptic diversity, each island housing independent evolutionary lineages.

Phylogeography of Indo-Pacific reef fishes: sister wrassesCoris gaimardandC. cuvieriin the Red Sea, Indian Ocean and Pacific Ocean

KAUST Repository

Ahti, Pauliina A.; Coleman, Richard R.; DiBattista, Joseph; Berumen, Michael L.; Rocha, Luiz A.; Bowen, Brian W.

2016-01-01

Aim: The aim of this study was to resolve the evolutionary history, biogeographical barriers and population histories for sister species of wrasses, the African Coris (Coris cuvieri) in the Indian Ocean and Red Sea, and the Yellowtail Coris (Coris gaimard) in the Pacific Ocean. Glacial sea level fluctuations during the Pleistocene have shaped the evolutionary trajectories of Indo-Pacific marine fauna, primarily by creating barriers between the Red Sea, Indian Ocean and Pacific Ocean. Here, we evaluate the influence of these episodic glacial barriers on sister species C. cuvieri and C. gaimard. Location: Red Sea, Indian Ocean, Pacific Ocean. Methods: Sequences from mitochondrial DNA cytochrome oxidase c subunit I (COI), and nuclear introns gonadotropin-releasing hormone (GnRH) and ribosomal S7 protein were analysed in 426 individuals from across the range of both species. Median-joining networks, analysis of molecular variance and Bayesian estimates of the time since most recent common ancestor were used to resolve recent population history and connectivity. Results: Cytochrome oxidase c subunit I haplotypes showed a divergence of 0.97% between species, and nuclear alleles were shared between species. No population structure was detected between the Indian Ocean and Red Sea. The strongest signal of population structure was in C. gaimard between the Hawaiian biogeographical province and other Pacific locations (COI ϕ(symbol)ST = 0.040-0.173, P < 0.006; S7 ϕ(symbol)ST = 0.046, P < 0.001; GnRH ϕ(symbol)ST = 0.022, P < 0.005). Time to most recent common ancestor is c. 2.12 Ma for C. cuvieri and 1.76 Ma for C. gaimard. Main conclusions: We demonstrate an Indian-Pacific divergence of c. 2 Myr and high contemporary gene flow between the Red Sea and Indian Ocean, mediated in part by the long pelagic larval stage. The discovery of hybrids at Christmas Island indicates that Indian and Pacific lineages have come into secondary contact after allopatric isolation. Subspecies

Phylogeography of Indo-Pacific reef fishes: sister wrassesCoris gaimardandC. cuvieriin the Red Sea, Indian Ocean and Pacific Ocean

KAUST Repository

Ahti, Pauliina A.

2016-02-01

Aim: The aim of this study was to resolve the evolutionary history, biogeographical barriers and population histories for sister species of wrasses, the African Coris (Coris cuvieri) in the Indian Ocean and Red Sea, and the Yellowtail Coris (Coris gaimard) in the Pacific Ocean. Glacial sea level fluctuations during the Pleistocene have shaped the evolutionary trajectories of Indo-Pacific marine fauna, primarily by creating barriers between the Red Sea, Indian Ocean and Pacific Ocean. Here, we evaluate the influence of these episodic glacial barriers on sister species C. cuvieri and C. gaimard. Location: Red Sea, Indian Ocean, Pacific Ocean. Methods: Sequences from mitochondrial DNA cytochrome oxidase c subunit I (COI), and nuclear introns gonadotropin-releasing hormone (GnRH) and ribosomal S7 protein were analysed in 426 individuals from across the range of both species. Median-joining networks, analysis of molecular variance and Bayesian estimates of the time since most recent common ancestor were used to resolve recent population history and connectivity. Results: Cytochrome oxidase c subunit I haplotypes showed a divergence of 0.97% between species, and nuclear alleles were shared between species. No population structure was detected between the Indian Ocean and Red Sea. The strongest signal of population structure was in C. gaimard between the Hawaiian biogeographical province and other Pacific locations (COI ϕ(symbol)ST = 0.040-0.173, P < 0.006; S7 ϕ(symbol)ST = 0.046, P < 0.001; GnRH ϕ(symbol)ST = 0.022, P < 0.005). Time to most recent common ancestor is c. 2.12 Ma for C. cuvieri and 1.76 Ma for C. gaimard. Main conclusions: We demonstrate an Indian-Pacific divergence of c. 2 Myr and high contemporary gene flow between the Red Sea and Indian Ocean, mediated in part by the long pelagic larval stage. The discovery of hybrids at Christmas Island indicates that Indian and Pacific lineages have come into secondary contact after allopatric isolation. Subspecies

Biogeochemical studies of selenium in the Indian Ocean

International Nuclear Information System (INIS)

Hattori, H.; Nakaguchi, Y.; Hiraki, K.; Kimura, M.; Koike, Y.

1999-01-01

Selenium that is a one of trace essential elements exists mainly in the chemical form of Se(IV), Se(VI) and organic selenium in ocean. Moreover, the monitoring of the selenium species has become a matter of interest as a mean of estimating their influence in biological processes in ocean. In recent works, some investigators reported that Se(IV) shows nutrient-type especially like silica's behavior, Se(VI) shows an approximately constant value, and the biological activities control the distribution of organic selenium. However, these reports were not included the whole world's oceans. It is necessary to research several oceans for the explication of fate on selenium. We investigated at the most interesting area - the Eastern Indian Ocean where should play a key role in global ocean's cycle for acquiring the new knowledge of selenium species at first

Vicariance and Oceanic Barriers Drive Contemporary Genetic Structure of Widespread Mangrove Species Sonneratia alba J. Sm in the Indo-West Pacific

Directory of Open Access Journals (Sweden)

Alison K. S. Wee

2017-12-01

Full Text Available Patterns of genetic structure are essential for a comprehensive understanding of the evolution and biogeography of a species. Here, we investigated the genetic patterns of one of the most widespread and abundant mangrove species in the Indo-West Pacific, Sonneratia alba J. Sm., in order to gain insights into the ecological and evolutionary drivers of genetic structure in mangroves. We employed 11 nuclear microsatellite loci and two chloroplast regions to genotyped 25 S. alba populations. Our objectives were to (1 assess the level of genetic diversity and its geographic distribution; and (2 determine the genetic structure of the populations. Our results revealed significant genetic differentiation among populations. We detected a major genetic break between Indo-Malesia and Australasia, and further population subdivision within each oceanic region in these two major clusters. The phylogeographic patterns indicated a strong influence of vicariance, oceanic barriers and geographic distance on genetic structure. In addition, we found low genetic diversity and high genetic drift at range edge. This study advances the scope of mangrove biogeography by demonstrating a unique scenario whereby a widespread species has limited dispersal and high genetic divergence among populations.

Oceans Past

DEFF Research Database (Denmark)

Based on research for the History of Marine Animal Populations project, Oceans Past examines the complex relationship our forebears had with the sea and the animals that inhabit it. It presents eleven studies ranging from fisheries and invasive species to offshore technology and the study of marine...... environmental history, bringing together the perspectives of historians and marine scientists to enhance understanding of ocean management of the past, present and future. In doing so, it also highlights the influence that changes in marine ecosystems have upon the politics, welfare and culture of human...

Oceanic migration and spawning of anguillid eels.

Science.gov (United States)

Tsukamoto, K

2009-06-01

Many aspects of the life histories of anguillid eels have been revealed in recent decades, but the spawning migrations of their silver eels in the open ocean still remains poorly understood. This paper overviews what is known about the migration and spawning of anguillid species in the ocean. The factors that determine exactly when anguillid eels will begin their migrations are not known, although environmental influences such as lunar cycle, rainfall and river discharge seem to affect their patterns of movement as they migrate towards the ocean. Once in the ocean on their way to the spawning area, silver eels probably migrate in the upper few hundred metres, while reproductive maturation continues. Although involvement of a magnetic sense or olfactory cues seems probable, how they navigate or what routes they take are still a matter of speculation. There are few landmarks in the open ocean to define their spawning areas, other than oceanographic or geological features such as oceanic fronts or seamounts in some cases. Spawning of silver eels in the ocean has never been observed, but artificially matured eels of several species have exhibited similar spawning behaviours in the laboratory. Recent collections of mature adults and newly spawned preleptocephali in the spawning area of the Japanese eel Anguilla japonica have shown that spawning occurs during new moon periods in the North Equatorial Current region near the West Mariana Ridge. These data, however, show that the latitude of the spawning events can change among months and years depending on oceanographic conditions. Changes in spawning location of this and other anguillid species may affect their larval transport and survival, and appear to have the potential to influence recruitment success. A greater understanding of the spawning migration and the choice of spawning locations by silver eels is needed to help conserve declining anguillid species.

A new species of brooding Psolidae (Echinodermata: Holothuroidea) from deep-sea off Argentina, Southwestern Atlantic Ocean

Science.gov (United States)

Martinez, Mariano I.; Penchaszadeh, Pablo E.

2017-12-01

This paper describes a new species of Psolus (Holothuroidea, Echinodermata), P. lawrencei sp. nov., (19 specimens) found in the deep sea (308-1398 m) in the Southwestern Atlantic Ocean (SWAO) (around 38°S-54°W) with brooders (up to 3.15 mm) in the tentacles of females and a penis-like genital papilla on males. The presence of dorsal scales, the concave shape of the ossicles with a bridge, the distribution of podia on the dorsal side and the absence of large and conspicuous oral and anal valves are unique for this species. Furthermore, this is the first species of this genus found outside Antarctica that broods between its tentacles. The paper also reviews the reproductive, brooding development and morphological characteristics of P. lawrencei sp. nov. and compares them with those of several members of the family Psolidae. Finally, a possible connectivity between the deep-sea populations in the SWAO and in Antarctica is considered based on the appearance of a similar reproductive pattern in populations found in both areas, which suggests a past or present connection between these regions.

Ocean Futures Under Ocean Acidification, Marine Protection, and Changing Fishing Pressures Explored Using a Worldwide Suite of Ecosystem Models

Directory of Open Access Journals (Sweden)

Erik Olsen

2018-03-01

Full Text Available Ecosystem-based management (EBM of the ocean considers all impacts on and uses of marine and coastal systems. In recent years, there has been a heightened interest in EBM tools that allow testing of alternative management options and help identify tradeoffs among human uses. End-to-end ecosystem modeling frameworks that consider a wide range of management options are a means to provide integrated solutions to the complex ocean management problems encountered in EBM. Here, we leverage the global advances in ecosystem modeling to explore common opportunities and challenges for ecosystem-based management, including changes in ocean acidification, spatial management, and fishing pressure across eight Atlantis (atlantis.cmar.csiro.au end-to-end ecosystem models. These models represent marine ecosystems from the tropics to the arctic, varying in size, ecology, and management regimes, using a three-dimensional, spatially-explicit structure parametrized for each system. Results suggest stronger impacts from ocean acidification and marine protected areas than from altering fishing pressure, both in terms of guild-level (i.e., aggregations of similar species or groups biomass and in terms of indicators of ecological and fishery structure. Effects of ocean acidification were typically negative (reducing biomass, while marine protected areas led to both “winners” and “losers” at the level of particular species (or functional groups. Changing fishing pressure (doubling or halving had smaller effects on the species guilds or ecosystem indicators than either ocean acidification or marine protected areas. Compensatory effects within guilds led to weaker average effects at the guild level than the species or group level. The impacts and tradeoffs implied by these future scenarios are highly relevant as ocean governance shifts focus from single-sector objectives (e.g., sustainable levels of individual fished stocks to taking into account competing

A New Desalination Pump Helps Define the pH of Ocean Worlds

Science.gov (United States)

Levi, A.; Sasselov, D.

2018-04-01

We study ocean exoplanets, for which the global surface ocean is separated from the rocky interior by a high-pressure ice mantle. We describe a mechanism that can pump salts out of the ocean, resulting in oceans of very low salinity. Here we focus on the H2O–NaCl system, though we discuss the application of this pump to other salts as well. We find our ocean worlds to be acidic, with a pH in the range of 2–4. We discuss and compare between the conditions found within our studied oceans and the conditions in which polyextremophiles were discovered. This work focuses on exoplanets in the super-Earth mass range (∼2 M ⊕), with water composing at least a few percent of their mass. However, the principle of the desalination pump might extend beyond this mass range.

The diversity of Indian Ocean Heterotardigrada

Directory of Open Access Journals (Sweden)

Roberto SANDULLI

2007-09-01

Full Text Available Information about Indian Ocean tardigrades is quite scarce and in most cases refers to species in coastal coralline sediment and occasionally in abyssal mud. The present data concern species found in the intertidal sand of Coco and La Digue Islands in the Seychelles, previously unsampled for tardigrades, as well as species in subtidal sediment found at depths ranging between 1 and 60 m off the shores of the Maldive Atolls. These sediments are all very similar and consist of heterogeneous coralline sand, moderately or scarcely sorted. Sixteen species (three new to science were found in the Seychelles, belonging to Renaudarctidae, Stygarctidae, Halechiniscidae, Batillipedidae and Echiniscoididae. Diversity and evenness data are also interesting, with maximum values of H' = 2.59 and of J = 0.97. In the Maldives 25 species were found (two new to science belonging to Neostygarctidae, Stygarctidae, Halechiniscidae and Batillipedidae. Such a number of species, despite the low percentage of tardigrade fauna (only 0.6% of the total meiofauna, contributes to the high values of both diversity and evenness, with H' ranging between 1.5 and 2.6 and J between 0.6 and 1. The Indian Ocean tardigrade fauna currently numbers 31 species of Arthrotardigrada and 2 species of Echiniscoidida. In the present study, Arthrotardigrada are the most abundant and all the families are present except Neoarctidae. Halechiniscidae is present with all the sub-families (except Euclavartinae, thus contributing to the high diversity values. Furthermore, 18 species, representing more than 50% of the total marine tardigrade fauna, are new records for the Indian Ocean, including five species new to science.

On a grain of sand - a microhabitat for the opportunistic agglutinated foraminifera Hemisphaerammina apta n. sp., from the early Eocene Arctic Ocean

Science.gov (United States)

McNeil, David H.; Neville, Lisa A.

2018-02-01

Hemisphaerammina apta n. sp. is an attached monothalamous agglutinated foraminifera discovered in shelf sediments of the early Eocene Arctic Ocean. It is a simple yet distinctive component of the endemic agglutinated foraminiferal assemblage that colonized the Arctic Ocean after the microfaunal turnover caused by the Paleocene-Eocene Thermal Maximum. Associated foraminifera are characterized by a high percentage of monothalamous species (up to 60 %) and are entirely agglutinated indicating a brackish (mesohaline) early Eocene Arctic Ocean. Hemisphaerammina apta occurs exclusively as individuals attached to fine detrital grains (0.2 to 1.8 mm) of sediment. It is a small species (0.06 to 0.2 mm in diameter), fine-grained, with a low hemispherical profile, no floor across the attachment area, no substantive marginal flange, no internal structures, and no aperture. Lacking an aperture, it apparently propagated and fed through minute (micrometre-sized) interstitial pores in the test wall. Attachment surfaces vary from concave to convex and rough to smooth. Grains for attachment are diverse in shape and type but are predominantly of quartz and chert. The presence of H. apta in the early Eocene was an opportunistic response to an environment with an active hydrological system (storm events). Attachment to grains of sand would provide a more stable base on a sea floor winnowed by storm-generated currents. Active transport is indicated by the relative abundance of reworked foraminifera mixed with in situ species. Contemporaneous reworking and colonization by H. apta is suggested by its attachment to a reworked specimen of Cretaceous foraminifera.

Molecular signatures of transgenerational response to ocean acidification in a species of reef fish

KAUST Repository

Schunter, Celia Marei; Welch, Megan J.; Ryu, Tae Woo; Zhang, Huoming; Berumen, Michael L.; Nilsson, Gö ran E.; Munday, Philip L.; Ravasi, Timothy

2016-01-01

The impact of ocean acidification on marine ecosystems will depend on species capacity to adapt. Recent studies show that the behaviour of reef fishes is impaired at projected CO levels; however, individual variation exists that might promote adaptation. Here, we show a clear signature of parental sensitivity to high CO in the brain molecular phenotype of juvenile spiny damselfish, Acanthochromis polyacanthus, primarily driven by circadian rhythm genes. Offspring of CO -tolerant and CO -sensitive parents were reared at near-future CO (754 μatm) or present-day control levels (414 μatm). By integrating 33 brain transcriptomes and proteomes with a de novo assembled genome we investigate the molecular responses of the fish brain to increased CO and the expression of parental tolerance to high CO in the offspring molecular phenotype. Exposure to high CO resulted in differential regulation of 173 and 62 genes and 109 and 68 proteins in the tolerant and sensitive groups, respectively. Importantly, the majority of differences between offspring of tolerant and sensitive parents occurred in high CO conditions. This transgenerational molecular signature suggests that individual variation in CO sensitivity could facilitate adaptation of fish populations to ocean acidification.

Molecular signatures of transgenerational response to ocean acidification in a species of reef fish

KAUST Repository

Schunter, Celia Marei

2016-07-29

The impact of ocean acidification on marine ecosystems will depend on species capacity to adapt. Recent studies show that the behaviour of reef fishes is impaired at projected CO levels; however, individual variation exists that might promote adaptation. Here, we show a clear signature of parental sensitivity to high CO in the brain molecular phenotype of juvenile spiny damselfish, Acanthochromis polyacanthus, primarily driven by circadian rhythm genes. Offspring of CO -tolerant and CO -sensitive parents were reared at near-future CO (754 μatm) or present-day control levels (414 μatm). By integrating 33 brain transcriptomes and proteomes with a de novo assembled genome we investigate the molecular responses of the fish brain to increased CO and the expression of parental tolerance to high CO in the offspring molecular phenotype. Exposure to high CO resulted in differential regulation of 173 and 62 genes and 109 and 68 proteins in the tolerant and sensitive groups, respectively. Importantly, the majority of differences between offspring of tolerant and sensitive parents occurred in high CO conditions. This transgenerational molecular signature suggests that individual variation in CO sensitivity could facilitate adaptation of fish populations to ocean acidification.

Historical baselines and the future of shell calcification for a foundation species in a changing ocean

Science.gov (United States)

Pfister, Catherine A.; Roy, Kaustuv; Wootton, Timothy J.; McCoy, Sophie J.; Paine, Robert T.; Suchanek, Tom; Sanford, Eric

2016-01-01

Seawater pH and the availability of carbonate ions are decreasing due to anthropogenic carbon dioxide emissions, posing challenges for calcifying marine species. Marine mussels are of particular concern given their role as foundation species worldwide. Here, we document shell growth and calcification patterns in Mytilus californianus, the California mussel, over millennial and decadal scales. By comparing shell thickness across the largest modern shells, the largest mussels collected in the 1960s–1970s and shells from two Native American midden sites (∼1000–2420 years BP), we found that modern shells are thinner overall, thinner per age category and thinner per unit length. Thus, the largest individuals of this species are calcifying less now than in the past. Comparisons of shell thickness in smaller individuals over the past 10–40 years, however, do not show significant shell thinning. Given our sampling strategy, these results are unlikely to simply reflect within-site variability or preservation effects. Review of environmental and biotic drivers known to affect shell calcification suggests declining ocean pH as a likely explanation for the observed shell thinning. Further future decreases in shell thickness could have significant negative impacts on M. californianus survival and, in turn, negatively impact the species-rich complex that occupies mussel beds..

Species-environment interactions changed by introduced herbivores in an oceanic high-mountain ecosystem.

Science.gov (United States)

Seguí, Jaume; López-Darias, Marta; Pérez, Antonio J; Nogales, Manuel; Traveset, Anna

2017-01-05

Summit areas of oceanic islands constitute some of the most isolated ecosystems on earth, highly vulnerable to climate change and introduced species. Within the unique high-elevation communities of Tenerife (Canary Islands), reproductive success and thus long-term survival of species may depend on environmental suitability as well as threat by introduced herbivores. By experimentally modifying the endemic and vulnerable species Viola cheiranthifolia along its entire altitudinal occurrence range, we studied plant performance, autofertility, pollen limitation and visitation rate and the interactive effect of grazing by non-native rabbits on them. We assessed the grazing effects by recording (1) the proportion of consumed plants and flowers along the gradient, (2) comparing fitness traits of herbivore-excluded plants along the gradient, and (3) comparing fitness traits, autofertility and pollen limitation between plants excluded from herbivores with unexcluded plants at the same locality. Our results showed that V. cheiranthifolia performance is mainly affected by inter-annual and microhabitat variability along the gradient, especially in the lowest edge. Despite the increasingly adverse environmental conditions, the plant showed no pollen limitation with elevation, which is attributed to the increase in autofertility levels (≥ 50% of reproductive output) and decrease in competition for pollinators at higher elevations. Plant fitness is, however, extremely reduced owing to the presence of non-native rabbits in the area (consuming more than 75% of the individuals in some localities), which in turn change plant trait-environment interactions along the gradient. Taken together, these findings indicate that the elevational variation found on plant performance results from the combined action of non-native rabbits with the microhabitat variability, exerting intricate ecological influences that threaten the survival of this violet species. Published by Oxford University

Niche separation and reproduction of Clausocalanus species (Copepoda, Calanoida) in the Atlantic Ocean

Science.gov (United States)

Peralba, Àurea; Mazzocchi, Maria Grazia; Harris, Roger P.

2017-11-01

The distribution and reproductive traits of copepods of the genus Clausocalanus were investigated during the Atlantic Meridional Transect cruise AMT-15, in September-October 2004 to estimate their ecological niches and secondary production in the epipelagic layer along a latitudinal cline (48°N-40°S). The distribution patterns of selected environmental parameters, i.e., temperature, salinity and chlorophyll a concentration, enabled eco-provinces to be identified as described by Longhurst (2006). Clausocalanus represented on average 34% of total copepod abundance, with a large predominance of adult females and copepodites over males. Among the eleven Clausocalanus species found during the survey, eight species showed a wide distributional range, i.e.,C. paululus, C. pergens, C. furcatus, C. arcuicornis, C. jobei, C. parapergens, C. lividus, and C. mastigophorus, while C. ingens, C. brevipes, and C. laticeps were recorded only in the South Atlantic. The smallest C. furcatus, C. paululus, and C. pergens together accounted for 85% of total Clausocalanus adult abundance. The ecological niches were clearly separated among congeners of similar size and largely overlapped in congeners whose size differed. The small- and medium-sized species, which are egg-sac-spawners, had smaller clutch size and lower egg-production rate than the larger broadcaster congeners. Nevertheless, embryo viability was lower in broadcasters, which may explain their low abundance in terms of lower recruitment. A sex ratio largely skewed toward females in all Clausocalanus species and the observation of viable eggs in successive clutches from isolated females seem to indicate that re-mating is not necessary in this genus. Broadcast-spawners showed the highest weight-specific fecundity rates in the genus but similar secondary production to sac-spawners despite the fact that they never occurred at high abundance. In light of their abundant occurrence in oceanic waters and well-defined ecological

Intraspecific variations in responses to ocean acidification in two branching coral species.

Science.gov (United States)

Sekizawa, Ayami; Uechi, Hikaru; Iguchi, Akira; Nakamura, Takashi; Kumagai, Naoki H; Suzuki, Atsushi; Sakai, Kazuhiko; Nojiri, Yukihiro

2017-09-15

Ocean acidification is widely recognised to have a negative impact on marine calcifying organisms by reducing calcifications, but controversy remains over whether such organisms could cope with ocean acidification within a range of phenotypic plasticity and/or adapt to future acidifying ocean. We performed a laboratory rearing experiment using clonal fragments of the common branching corals Montipora digitata and Porites cylindrica under control and acidified seawater (lower pH) conditions (approximately 400 and 900μatm pCO 2 , respectively) and evaluated the intraspecific variations in their responses to ocean acidification. Intra- and interspecific variations in calcification and photosynthetic efficiency were evident according to both pCO 2 conditions and colony, indicating that responses to acidification may be individually variable at the colony level. Our results suggest that some corals may cope with ocean acidification within their present genotypic composition by adaptation through phenotypic plasticity, while others may be placed under selective pressures resulting in population alteration. Copyright © 2017 Elsevier Ltd. All rights reserved.

Species identification and other data collected from visual observation and other data from AIRCRAFT in the North Pacific Ocean and Puget Sound from 30 November 1977 to 04 October 1978 (NODC Accession 7800394)

Data.gov (United States)

National Oceanic and Atmospheric Administration, Department of Commerce — Species identification and other data were collected using visual observation and other instruments from AIRCRAFT in the Puget Sound and North Pacific Ocean. Data...

The Ocean: Our Future

Science.gov (United States)

Independent World Commission On The Oceans; Soares, Mario

1998-09-01

The Ocean, Our Future is the official report of the Independent World Commission on the Oceans, chaired by Mário Soares, former President of Portugal. Its aim is to summarize the very real problems affecting the ocean and its future management, and to provide imaginative solutions to these various and interlocking problems. The oceans have traditionally been taken for granted as a source of wealth, opportunity and abundance. Our growing understanding of the oceans has fundamentally changed this perception. We now know that in some areas, abundance is giving way to real scarcity, resulting in severe conflicts. Territorial disputes that threaten peace and security, disruptions to global climate, overfishing, habitat destruction, species extinction, indiscriminate trawling, pollution, the dumping of hazardous and toxic wastes, piracy, terrorism, illegal trafficking and the destruction of coastal communities are among the problems that today form an integral part of the unfolding drama of the oceans. Based on the deliberations, experience and input of more than 100 specialists from around the world, this timely volume provides a powerful overview of the state of our water world.

Carboniferous and Permian evolutionary records for the Paleo-Tethys Ocean constrained by newly discovered Xiangtaohu ophiolites from central Qiangtang, central Tibet

Science.gov (United States)

Zhang, Xiu-Zheng; Dong, Yong-Sheng; Wang, Qiang; Dan, Wei; Zhang, Chunfu; Deng, Ming-Rong; Xu, Wang; Xia, Xiao-Ping; Zeng, Ji-Peng; Liang, He

2016-07-01

Reconstructing the evolutionary history of the Paleo-Tethys Ocean remains at the center of debates over the linkage between Gondwana dispersion and Asian accretion. Identifying the remnants of oceanic lithosphere (ophiolites) has very important implications for identifying suture zones, unveiling the evolutionary history of fossil oceans, and reconstructing the amalgamation history between different blocks. Here we report newly documented ophiolite suites from the Longmu Co-Shuanghu Suture zone (LSSZ) in the Xiangtaohu area, central Qiangtang block, Tibet. Detailed geological investigations and zircon U-Pb dating reveal that the Xiangtaohu ophiolites are composed of a suite of Permian (281-275 Ma) ophiolites with a nearly complete Penrose sequence and a suite of Early Carboniferous (circa 350 Ma) ophiolite remnants containing only part of the lower oceanic crust. Geochemical and Sr-Nd-O isotopic data show that the Permian and Carboniferous ophiolites in this study were derived from an N-mid-ocean ridge basalts-like mantle source with varied suprasubduction-zone (SSZ) signatures and were characterized by crystallization sequences from wet magmas, suggesting typical SSZ-affinity ophiolites. Permian and Carboniferous SSZ ophiolites in the central Qiangtang provide robust evidence for the existence and evolution of an ancient ocean basin. Combining with previous studies on high-pressure metamorphic rocks and pelagic radiolarian cherts, and with tectonostratigraphic and paleontological data, we support the LSSZ as representing the main suture of the Paleo-Tethys Ocean which probably existed and evolved from Devonian to Triassic. The opening and demise of the Paleo-Tethys Ocean dominated the formation of the major framework for the East and/or Southeast Asia.

Being There & Getting Back Again: Half a Century of Deep Ocean Research & Discovery with the Human Occupied Vehicle "Alvin"

Science.gov (United States)

German, C. R.; Fornari, D. J.; Fryer, P.; Girguis, P. R.; Humphris, S. E.; Kelley, D. S.; Tivey, M.; Van Dover, C. L.; Von Damm, K.

2012-12-01

In 2013, Alvin returns to service after significant observational and operational upgrades supported by the NSF, NAVSEA & NOAA. Here we review highlights of the first half-century of deep submergence science conducted by Alvin, describe some of the most significant improvements for the new submarine and discuss the importance of these new capabilities for 21st century ocean science and education. Alvin has a long history of scientific exploration, discovery and intervention at the deep seafloor: in pursuit of hypothesis-driven research and in response to human impacts. One of Alvin's earliest achievements, at the height of the Cold War, was to help locate & recover an H-bomb in the Mediterranean, while the last dives completed, just ahead of the current refit, were to investigate the impacts of the Deep Water Horizon oil spill. Alvin has excelled in supporting a range of Earth & Life Science programs including, in the late 1970s, first direct observations and sampling of deep-sea hydrothermal vents and the unusual fauna supported by microbial chemosynthesis. The 1980s saw expansion of Alvin's dive areas to newly discovered hot-springs in the Atlantic & NE Pacific, Alvin's first dives to the wreck of RMS Titanic and its longest excursions away from WHOI yet, via Loihi Seamount (Hawaii) to the Mariana Trench. The 1990s saw Alvin's first event-response dives to sites where volcanic eruptions had just occurred at the East Pacific Rise & Juan de Fuca Ridge while the 2000s saw Alvin discover novel off-axis venting at Lost City. Observations from these dives fundamentally changed our views of volcanic and microbial processes within young ocean crust and even the origins of life! In parallel, new deep submergence capabilities, including manipulative experiments & sensor development, relied heavily on testing using Alvin. Recently, new work has focused on ocean margins where fluid flow from the seafloor results in the release of hydrocarbons and other chemical species that

Endangered Species Act

Data.gov (United States)

National Oceanic and Atmospheric Administration, Department of Commerce — The purpose of the Endangered Species Act (ESA) is to protect and recover imperiled species and the ecosystems upon which they depend. The U.S. Fish and Wildlife...

Checklist of Recent thecideoid brachiopods from the Indian Ocean and Red Sea, with a description of a new species of Thecidellina from Europa Island and a re-description of T. blochmanni Dall from Christmas Island.

Science.gov (United States)

Logan, Alan; Hoffmann, Jana; Lüter, Carsten

2015-09-08

Compilation of a checklist of Recent thecideoid brachiopods from the Indian Ocean and Red Sea indicates that members of this superfamily are represented by a small number of species. The subfamily Lacazellinae is represented by Ospreyella maldiviana from the Maldive Islands but the presence of Lacazella cannot yet be confirmed in the Indian Ocean as the holotype of Lacazella mauritiana from Mauritius is lost. The subfamily Thecidellininae is represented by Thecidellina blochmanni from Christmas Island in the eastern Indian Ocean and the Red Sea while a new species T. europa is here described from Europa Island in the Mozambique Channel. The subfamily Minutellinae is represented by Minutella minuta from Samper Bank and Walters Bank in the south-western Indian Ocean and in the Red Sea. Since the holotype of Thecidellina blochmanni from Flying Fish Cove, Christmas Island is also lost, this species is re-described and illustrated mainly from topotypes in the Museum für Naturkunde, Berlin, from which a suggested neotype has been selected.

Pleurolucina from the western Atlantic and eastern Pacific Oceans: a new intertidal species from Curaçao with unusual shell microstructure (Mollusca, Bivalvia, Lucinidae

Directory of Open Access Journals (Sweden)

Emily A. Glover

2016-09-01

Full Text Available A new shallow water species of the lucinid bivalve Pleurolucina is described from Curaçao in the southern Caribbean Sea and compared with known species of the genus from the western Atlantic and eastern Pacific Oceans. Although confused with the Floridian species P. leucocyma, it is most similar to the eastern Pacific P. undata. As in all studied lucinids, the new species possesses symbiotic bacteria housed in the ctenidia. The shell microstructure is unusual with repeated and intercalated conchiolin layers that have sublayers of ‘tulip-shaped’ calcareous spherules. Predatory drillings by naticid gastropods frequently terminate at the conchiolin layers.

Restricted regions of enhanced growth of Antarctic krill in the circumpolar Southern Ocean.

Science.gov (United States)

Murphy, Eugene J; Thorpe, Sally E; Tarling, Geraint A; Watkins, Jonathan L; Fielding, Sophie; Underwood, Philip

2017-07-31

Food webs in high-latitude oceans are dominated by relatively few species. Future ocean and sea-ice changes affecting the distribution of such species will impact the structure and functioning of whole ecosystems. Antarctic krill (Euphausia superba) is a key species in Southern Ocean food webs, but there is little understanding of the factors influencing its success throughout much of the ocean. The capacity of a habitat to maintain growth will be crucial and here we use an empirical relationship of growth rate to assess seasonal spatial variability. Over much of the ocean, potential for growth is limited, with three restricted oceanic regions where seasonal conditions permit high growth rates, and only a few areas around the Scotia Sea and Antarctic Peninsula suitable for growth of the largest krill (>60 mm). Our study demonstrates that projections of impacts of future change need to account for spatial and seasonal variability of key ecological processes within ocean ecosystems.

Ocean plankton. Structure and function of the global ocean microbiome.

Science.gov (United States)

Sunagawa, Shinichi; Coelho, Luis Pedro; Chaffron, Samuel; Kultima, Jens Roat; Labadie, Karine; Salazar, Guillem; Djahanschiri, Bardya; Zeller, Georg; Mende, Daniel R; Alberti, Adriana; Cornejo-Castillo, Francisco M; Costea, Paul I; Cruaud, Corinne; d'Ovidio, Francesco; Engelen, Stefan; Ferrera, Isabel; Gasol, Josep M; Guidi, Lionel; Hildebrand, Falk; Kokoszka, Florian; Lepoivre, Cyrille; Lima-Mendez, Gipsi; Poulain, Julie; Poulos, Bonnie T; Royo-Llonch, Marta; Sarmento, Hugo; Vieira-Silva, Sara; Dimier, Céline; Picheral, Marc; Searson, Sarah; Kandels-Lewis, Stefanie; Bowler, Chris; de Vargas, Colomban; Gorsky, Gabriel; Grimsley, Nigel; Hingamp, Pascal; Iudicone, Daniele; Jaillon, Olivier; Not, Fabrice; Ogata, Hiroyuki; Pesant, Stephane; Speich, Sabrina; Stemmann, Lars; Sullivan, Matthew B; Weissenbach, Jean; Wincker, Patrick; Karsenti, Eric; Raes, Jeroen; Acinas, Silvia G; Bork, Peer

2015-05-22

Microbes are dominant drivers of biogeochemical processes, yet drawing a global picture of functional diversity, microbial community structure, and their ecological determinants remains a grand challenge. We analyzed 7.2 terabases of metagenomic data from 243 Tara Oceans samples from 68 locations in epipelagic and mesopelagic waters across the globe to generate an ocean microbial reference gene catalog with >40 million nonredundant, mostly novel sequences from viruses, prokaryotes, and picoeukaryotes. Using 139 prokaryote-enriched samples, containing >35,000 species, we show vertical stratification with epipelagic community composition mostly driven by temperature rather than other environmental factors or geography. We identify ocean microbial core functionality and reveal that >73% of its abundance is shared with the human gut microbiome despite the physicochemical differences between these two ecosystems. Copyright © 2015, American Association for the Advancement of Science.

Anthopleura radians, a new species of sea anemone (Cnidaria: Actiniaria: Actiniidae from northern Chile, with comments on other species of the genus from the South Pacific Ocean

Directory of Open Access Journals (Sweden)

Carlos Spano

2017-05-01

Full Text Available A new species of sea anemone, Anthopleura radians n. sp., is described from the intertidal zone of northern Chile and the taxonomic status of the other Anthopleura species from the South Pacific are discussed. A. radians n. sp. is characterized by a yellow-whitish and brown checkerboard-like pattern on the oral disc, adhesive verrucae along the entire column and a series of marginal projections, each bearing a brightly-colored acrorhagus on the oral surface. This is the seventh species of Anthopleura described from the South Pacific Ocean; each one distinguished by a particular combination of differences related to their coloration pattern, presence of zooxanthellae, cnidae, and mode of reproduction. Some of these species have not been reported since their original description and thus require to be taxonomically validated. A. hermaphroditica and A. aureoradiata are synonyms considering the lack of differences seen between live specimens, museum collections and published records. A. radians could also be a junior synonym of A. minima, however, no type material was found for testing this hypothesis. Furthermore, it is crucial to designate neotypes for A. inconspicua, A. rosea and A. minima since there are no name-bearing types reported for these species.

Distribution of Oxycephalidae (Hyperiidea-Amphipoda) in the Indian Ocean- A statistical study

Digital Repository Service at National Institute of Oceanography (India)

Nair, K.K.C.; Jayalakshmy, K.V.

Statistical analysis of oxycephalids on coexistence of the species showed two clusters of high affinity in the Arabian Sea, four in the Bay of Bengal, one in the South East Indian Ocean and three in the South West Indian Ocean. Species occurring...

Mediterranean climate change and Indian Ocean warming

International Nuclear Information System (INIS)

Hoerling, M.; Eischeid, J.; Hurrel, J.

2006-01-01

General circulation model (GCM) responses to 20. century changes in sea surface temperatures (SSTs) and greenhouse gases are diagnosed, with emphasis on their relationship to observed regional climate change over the Mediterranean region. A major question is whether the Mediterranean region's drying trend since 1950 can be understood as a consequence of the warming trend in tropical SSTs. We focus on the impact of Indian Ocean warming, which is itself the likely result of increasing greenhouse gases. It is discovered that a strong projection onto the positive polarity of the North Atlantic Oscillation (NAO) index characterizes the atmospheric response structure to the 1950-1999 warming of Indian Ocean SSTs. This influence appears to be robust in so far as it is reproduced in ensembles of experiments using three different GCMs. Both the equilibrium and transient responses to Indian Ocean warming are examined. Under each scenario, the latitude of prevailing mid latitude westerlies shifts poleward during the November-April period. The consequence is a drying of the Mediterranean region, whereas northern Europe and Scandinavia receive increased precipitation in concert with the poleward shift of storminess. The IPCC (TAR) 20. century coupled ocean-atmosphere simulations forced by observed greenhouse gas changes also yield a post-1950 drying trend over the Mediterranean. We argue that this feature of human-induced regional climate change is the outcome of a dynamical feedback, one involving Indian Ocean warming and a requisite adjustment of atmospheric circulation systems to such ocean warming

77 FR 58812 - Endangered Species; File No. 17316

Science.gov (United States)

2012-09-24

..., importing, and exporting of endangered and threatened species (50 CFR 222-226). The applicant proposes to... DEPARTMENT OF COMMERCE National Oceanic and Atmospheric Administration RIN 0648-XC252 Endangered Species; File No. 17316 AGENCY: National Marine Fisheries Service (NMFS), National Oceanic and Atmospheric...

Postrelease survival, vertical and horizontal movements, and thermal habitats of five species of pelagic sharks in the central Pacific Ocean

DEFF Research Database (Denmark)

Musyl, Michael K.; Brill, Richard W.; Curran, Daniel S.

2011-01-01

]) in the central Pacific Ocean to determine speciesspecific movement patterns and survival rates after release from longline fishing gear. Only a single postrelease mortality could be unequivocally documented: a male blue shark which succumbed seven days after release. Meta-analysis of published reports......From 2001 to 2006, 71 pop-up satellite archival tags (PSATs) were deployed on five species of pelagic shark (blue shark [Prionace glauca]; shortfin mako [Isurus oxyrinchus]; silky shark [Carcharhinus falciformis]; oceanic whitetip shark [C. longimanus]; and bigeye thresher [Alopias superciliosus...... and the current study (n=78 reporting PSATs) indicated that the summary effect of postrelease mortality for blue sharks was 15% (95% CI, 8.5-25.1%) and suggested that catch-and-release in longline fisheries can be a viable management tool to protect parental biomass in shark populations. Pelagic sharks displayed...

75 FR 67682 - Endangered Species; File No. 15566

Science.gov (United States)

2010-11-03

... permit is requested under the authority of the Endangered Species Act of 1973, as amended (ESA; 16 U.S.C... DEPARTMENT OF COMMERCE National Oceanic and Atmospheric Administration RIN 0648-XA013 Endangered Species; File No. 15566 AGENCY: National Marine Fisheries Service (NMFS), National Oceanic and Atmospheric...

Increased exposure of Southern Ocean phytoplankton to ultraviolet radiation

Science.gov (United States)

Lubin, Dan; Arrigo, Kevin R.; van Dijken, Gert L.

2004-05-01

Satellite remote sensing of both surface solar ultraviolet radiation (UVR) and chlorophyll over two decades shows that biologically significant ultraviolet radiation increases began to occur over the Southern Ocean three years before the ozone ``hole'' was discovered. Beginning in October 1983, the most frequent occurrences of enhanced UVR over phytoplankton-rich waters occurred in the Weddell Sea and Indian Ocean sectors of the Southern Ocean, impacting 60% of the surface biomass by the late 1990s. These results suggest two reasons why more serious impacts to the base of the marine food web may not have been detected by field experiments: (1) the onset of UVR increases several years before dedicated field work began may have impacted the most sensitive organisms long before such damage could be detected, and (2) most biological field work has so far not taken place in Antarctic waters most extensively subjected to enhanced UVR.

The enigmatic SAR202 cluster up close: shedding light on a globally distributed dark ocean lineage involved in sulfur cycling.

Science.gov (United States)

Mehrshad, Maliheh; Rodriguez-Valera, Francisco; Amoozegar, Mohammad Ali; López-García, Purificación; Ghai, Rohit

2018-03-01

The dark ocean microbiota represents the unknown majority in the global ocean waters. The SAR202 cluster belonging to the phylum Chloroflexi was the first microbial lineage discovered to specifically inhabit the aphotic realm, where they are abundant and globally distributed. The absence of SAR202 cultured representatives is a significant bottleneck towards understanding their metabolic capacities and role in the marine environment. In this work, we use a combination of metagenome-assembled genomes from deep-sea datasets and publicly available single-cell genomes to construct a genomic perspective of SAR202 phylogeny, metabolism and biogeography. Our results suggest that SAR202 cluster members are medium sized, free-living cells with a heterotrophic lifestyle, broadly divided into two distinct clades. We present the first evidence of vertical stratification of these microbes along the meso- and bathypelagic ocean layers. Remarkably, two distinct species of SAR202 cluster are highly abundant in nearly all deep bathypelagic metagenomic datasets available so far. SAR202 members metabolize multiple organosulfur compounds, many appear to be sulfite-oxidizers and are predicted to play a major role in sulfur turnover in the dark water column. This concomitantly suggests an unsuspected availability of these nutrient sources to allow for the high abundance of these microbes in the deep sea.

Two new species of Syndesmis (Platyhelminthes, Rhabdocoela, Umagillidae from the sea urchin Pseudechinus magellanicus (Echinodermata, Echinoidea in the Southwestern Atlantic Ocean

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Francisco Brusa

2017-08-01

Full Text Available In this paper, we describe two new species of Syndesmis living in Pseudechinus magellanicus in the Southwest Atlantic Ocean. The new species have a long stylet in the male reproductive system, which is different from that of the known species of the genus. Specimens of Syndesmis selknami n. sp. have a ∼220-μm-long stylet (∼1/3 of the body length, 0.69 mm. This ratio is unique because only four species (Syndesmis echinorum, Syndesmis rubida, Syndesmis inconspicua and Syndesmis echiniacuti have similar stylet lengths but are larger in body sizes (3–5 mm. Specimens of Syndesmis aonikenki n. sp. have a ∼148-μm-long stylet (∼1/10 of the body length, 1.11 mm. Syndesmis pallida has a similar ratio but the uterus is located posteriorly, and the filament glands are very small and located in the posterior region of the body. These are the first flatworms reported parasitizing Pseudechinus magellanicus.

Scientists and Educators: Joining Forces to Enhance Ocean Science Literacy

Science.gov (United States)

Keener-Chavis, P.

2004-12-01

The need for scientists to work with educators to enhance the general public's understanding of science has been addressed for years in reports like Science for All Americans (1990), NSF in a Changing World (1995), Turning to the Sea: America's Ocean Future (1999), Discovering the Earth's Final Frontier, A U.S. Strategy for Ocean Exploration (2000), and most recently, the U.S. Commission on Ocean Policy Report (2004). As reported in The National Science Foundation's Center for Ocean Science Education Excellence (COSEE) Workshop Report (2000), "The Ocean Sciences community did not answer (this) call, even though their discovery that the ocean was a more critical driving force in the natural environment than previously thought possessed great educational significance." It has been further acknowledged that "rapid and extensive improvement of science education is unlikely to occur until it becomes clear to scientists that they have an obligation to become involved in elementary- and secondary-level science (The Role of Scientists in the Professional Development of Science Teachers, National Research Council, 1996.) This presentation will focus on teachers' perceptions of how scientists conduct research, scientists' perceptions of how teachers should teach, and some misconceptions between the two groups. Criteria for high-quality professional development for teachers working with scientists will also be presented, along with a brief overview of the National Oceanic and Atmospheric Administration's Ocean Exploration program efforts to bring teachers and ocean scientists together to further ocean science literacy at the national level through recommendations put forth in the U.S. Commission on Ocean Policy Report (2004).

Larval and postlarval stages of Atypopenaeus Alcock (Decapoda, Penaeidae: Penaeinae) from Indian Ocean

Digital Repository Service at National Institute of Oceanography (India)

Paulinose, V.T.

Two of the early mysis stages and an early postlarva of a species of Atypopenaeus are described here for the first time. A total of 15 specimens were obtained from the Indian Ocean during the International Indian Ocean Expedition (IIOE). The species...

76 FR 58471 - Endangered Species; File No. 16306

Science.gov (United States)

2011-09-21

... requested under the authority of the Endangered Species Act of 1973, as amended (ESA; 16 U.S.C. 1531 et seq... DEPARTMENT OF COMMERCE National Oceanic and Atmospheric Administration RIN 0648-XA712 Endangered Species; File No. 16306 AGENCY: National Marine Fisheries Service (NMFS), National Oceanic and Atmospheric...

78 FR 29114 - Endangered Species; File No. 17304

Science.gov (United States)

2013-05-17

... requested under the authority of the Endangered Species Act of 1973, as amended (ESA; 16 U.S.C. 1531 et seq... DEPARTMENT OF COMMERCE National Oceanic and Atmospheric Administration RIN 0648-XC667 Endangered Species; File No. 17304 AGENCY: National Marine Fisheries Service (NMFS), National Oceanic and Atmospheric...

Discover the Atlantic Ocean: An Exciting Coloring Book of Fish and Shellfish.

Science.gov (United States)

Flick, George J.

This coloring book contains pictures of more than 79 fish and shellfish found on the Atlantic Coast. Captions give information on habitats, behavior, or commercial uses of the species pictured. Indexes of both common and scientific names are given. (BB)

A biologically relevant method for considering patterns of oceanic retention in the Southern Ocean

Science.gov (United States)

Mori, Mao; Corney, Stuart P.; Melbourne-Thomas, Jessica; Klocker, Andreas; Sumner, Michael; Constable, Andrew

2017-12-01

Many marine species have planktonic forms - either during a larval stage or throughout their lifecycle - that move passively or are strongly influenced by ocean currents. Understanding these patterns of movement is important for informing marine ecosystem management and for understanding ecological processes generally. Retention of biological particles in a particular area due to ocean currents has received less attention than transport pathways, particularly for the Southern Ocean. We present a method for modelling retention time, based on the half-life for particles in a particular region, that is relevant for biological processes. This method uses geostrophic velocities at the ocean surface, derived from 23 years of satellite altimetry data (1993-2016), to simulate the advection of passive particles during the Southern Hemisphere summer season (from December to March). We assess spatial patterns in the retention time of passive particles and evaluate the processes affecting these patterns for the Indian sector of the Southern Ocean. Our results indicate that the distribution of retention time is related to bathymetric features and the resulting ocean dynamics. Our analysis also reveals a moderate level of consistency between spatial patterns of retention time and observations of Antarctic krill (Euphausia superba) distribution.

Predicting the Response of Molluscs to the Impact of Ocean Acidification

Directory of Open Access Journals (Sweden)

John M. Wright

2013-04-01

Full Text Available Elevations in atmospheric carbon dioxide (CO2 are anticipated to acidify oceans because of fundamental changes in ocean chemistry created by CO2 absorption from the atmosphere. Over the next century, these elevated concentrations of atmospheric CO2 are expected to result in a reduction of the surface ocean waters from 8.1 to 7.7 units as well as a reduction in carbonate ion (CO32− concentration. The potential impact that this change in ocean chemistry will have on marine and estuarine organisms and ecosystems is a growing concern for scientists worldwide. While species-specific responses to ocean acidification are widespread across a number of marine taxa, molluscs are one animal phylum with many species which are particularly vulnerable across a number of life-history stages. Molluscs make up the second largest animal phylum on earth with 30,000 species and are a major producer of CaCO3. Molluscs also provide essential ecosystem services including habitat structure and food for benthic organisms (i.e., mussel and oyster beds, purification of water through filtration and are economically valuable. Even sub lethal impacts on molluscs due to climate changed oceans will have serious consequences for global protein sources and marine ecosystems.

Predicting the Response of Molluscs to the Impact of Ocean Acidification

Science.gov (United States)

Parker, Laura M.; Ross, Pauline M.; O’Connor, Wayne A.; Pörtner, Hans O.; Scanes, Elliot; Wright, John M.

2013-01-01

Elevations in atmospheric carbon dioxide (CO2) are anticipated to acidify oceans because of fundamental changes in ocean chemistry created by CO2 absorption from the atmosphere. Over the next century, these elevated concentrations of atmospheric CO2 are expected to result in a reduction of the surface ocean waters from 8.1 to 7.7 units as well as a reduction in carbonate ion (CO32−) concentration. The potential impact that this change in ocean chemistry will have on marine and estuarine organisms and ecosystems is a growing concern for scientists worldwide. While species-specific responses to ocean acidification are widespread across a number of marine taxa, molluscs are one animal phylum with many species which are particularly vulnerable across a number of life-history stages. Molluscs make up the second largest animal phylum on earth with 30,000 species and are a major producer of CaCO3. Molluscs also provide essential ecosystem services including habitat structure and food for benthic organisms (i.e., mussel and oyster beds), purification of water through filtration and are economically valuable. Even sub lethal impacts on molluscs due to climate changed oceans will have serious consequences for global protein sources and marine ecosystems. PMID:24832802

Ocean acidification increases cadmium accumulation in marine bivalves: a potential threat to seafood safety.

Science.gov (United States)

Shi, Wei; Zhao, Xinguo; Han, Yu; Che, Zhumei; Chai, Xueliang; Liu, Guangxu

2016-01-21

To date, the effects of ocean acidification on toxic metals accumulation and the underlying molecular mechanism remains unknown in marine bivalve species. In the present study, the effects of the realistic future ocean pCO2 levels on the cadmium (Cd) accumulation in the gills, mantle and adductor muscles of three bivalve species, Mytilus edulis, Tegillarca granosa, and Meretrix meretrix, were investigated. The results obtained suggested that all species tested accumulated significantly higher Cd (p ocean acidification-induced increase in Cd accumulation may have occurred due to (i) the ocean acidification increased the concentration of Cd and the Cd(2+)/Ca(2+) in the seawater, which in turn increased the Cd influx through Ca channel; (ii) the acidified seawater may have brought about epithelia damage, resulting in easier Cd penetration; and (iii) ocean acidification hampered Cd exclusion.

Endangered Species Act Critical Habitat

Data.gov (United States)

National Oceanic and Atmospheric Administration, Department of Commerce — Critical habitat (CH) is designated for the survival and recovery of species listed as threatened or endangered under the Endangered Species Act (ESA). Critical...

75 FR 78974 - Endangered Species

Science.gov (United States)

2010-12-17

...-XA086 Endangered Species AGENCY: National Marine Fisheries Service (NMFS), National Oceanic and... the Endangered Species Act of 1973, as amended (16 U.S.C. 1531 et seq.) and the regulations governing the taking, importing, and exporting of endangered and threatened species (50 CFR 222-226). Permit...

Temperature, salinity, species identification, nutrient profiles and meteorological data collected by bottle, CTD, and plankton net on multiple cruises in the Pacific Ocean and South China Sea from 10/15/1970 - 02/13/1987 (NODC Accession 0000088)

Data.gov (United States)

National Oceanic and Atmospheric Administration, Department of Commerce — Temperature, species identification, and other data were collected from XIANG YANG HONG 14 and other platforms using net, bottle, and CTD casts in the Pacific Ocean...

Surface ocean metabarcoding confirms limited diversity in planktonic foraminifera but reveals unknown hyper-abundant lineages.

Science.gov (United States)

Morard, Raphaël; Garet-Delmas, Marie-José; Mahé, Frédéric; Romac, Sarah; Poulain, Julie; Kucera, Michal; de Vargas, Colomban

2018-02-07

Since the advent of DNA metabarcoding surveys, the planktonic realm is considered a treasure trove of diversity, inhabited by a small number of abundant taxa, and a hugely diverse and taxonomically uncharacterized consortium of rare species. Here we assess if the apparent underestimation of plankton diversity applies universally. We target planktonic foraminifera, a group of protists whose known morphological diversity is limited, taxonomically resolved and linked to ribosomal DNA barcodes. We generated a pyrosequencing dataset of ~100,000 partial 18S rRNA foraminiferal sequences from 32 size fractioned photic-zone plankton samples collected at 8 stations in the Indian and Atlantic Oceans during the Tara Oceans expedition (2009-2012). We identified 69 genetic types belonging to 41 morphotaxa in our metabarcoding dataset. The diversity saturated at local and regional scale as well as in the three size fractions and the two depths sampled indicating that the diversity of foraminifera is modest and finite. The large majority of the newly discovered lineages occur in the small size fraction, neglected by classical taxonomy. These unknown lineages dominate the bulk [>0.8 µm] size fraction, implying that a considerable part of the planktonic foraminifera community biomass has its origin in unknown lineages.

Ecological niches of open ocean phytoplankton taxa

DEFF Research Database (Denmark)

Brun, Philipp Georg; Vogt, Meike; Payne, Mark

2015-01-01

We characterize the realized ecological niches of 133 phytoplankton taxa in the open ocean based on observations from the MAREDAT initiative and a statistical species distribution model (MaxEnt). The models find that the physical conditions (mixed layer depth, temperature, light) govern large...... conditions in the open ocean. Our estimates of the realized niches roughly match the predictions of Reynolds' C-S-R model for the global ocean, namely that taxa classified as nutrient stress tolerant have niches at lower nutrient and higher irradiance conditions than light stress tolerant taxa. Yet...

Endangered Species & Biodiversity: A Classroom Project & Theme

Science.gov (United States)

Lauro, Brook

2012-01-01

Students discover the factors contributing to species losses worldwide by conducting a project about endangered species as a component of a larger classroom theme of biodiversity. Groups conduct research using online endangered- species databases and present results to the class using PowerPoint. Students will improve computer research abilities…

Life in the salinity gradient: Discovering mechanisms behind a new biodiversity pattern

Science.gov (United States)

Telesh, Irena; Schubert, Hendrik; Skarlato, Sergei

2013-12-01

A recently discovered paradoxical maximum of planktonic protistan species in the salinity gradient of the Baltic Sea revealed an inverse trend of species number/salinity relation in comparison to the previously accepted species-minimum model for macrozoobenthos. Here, we review long-term data on organisms of different size classes and ecological groups to show that eukaryotic and prokaryotic microbes in plankton demonstrate a maximum species richness in the challenging zone of the critical salinity 5-8, where the large-bodied bottom dwellers (macrozoobenthos, macroalgae and aquatic higher plants) experience large-scale salinity stress which leads to an impoverished diversity. We propose a new conceptual model to explain why the diversity of small, fast-developing, rapidly evolving unicellular plankton organisms benefits from relative vacancy of brackish-water ecological niches and impaired competitiveness therein. The ecotone theory, Hutchinson's Ecological Niche Concept, species-area relationships and the Intermediate Disturbance Hypothesis are considered as a theoretical framework for understanding extinctions, speciation and variations in the evolution rates of different aquatic species in ecosystems with the pronounced salinity gradient.

76 FR 2348 - Endangered Species

Science.gov (United States)

2011-01-13

.... 15596] Endangered Species AGENCY: National Marine Fisheries Service (NMFS), National Oceanic and... requested permit has been issued under the authority of the Endangered Species Act of 1973, as amended (ESA... endangered and threatened species (50 CFR parts 222-226). The North Carolina Aquarium at Fort Fisher has been...

Assessing species boundaries using multilocus species delimitation in a morphologically conserved group of neotropical freshwater fishes, the Poecilia sphenops species complex (Poeciliidae.

Directory of Open Access Journals (Sweden)

Justin C Bagley

Full Text Available Accurately delimiting species is fundamentally important for understanding species diversity and distributions and devising effective strategies to conserve biodiversity. However, species delimitation is problematic in many taxa, including 'non-adaptive radiations' containing morphologically cryptic lineages. Fortunately, coalescent-based species delimitation methods hold promise for objectively estimating species limits in such radiations, using multilocus genetic data. Using coalescent-based approaches, we delimit species and infer evolutionary relationships in a morphologically conserved group of Central American freshwater fishes, the Poecilia sphenops species complex. Phylogenetic analyses of multiple genetic markers (sequences of two mitochondrial DNA genes and five nuclear loci from 10/15 species and genetic lineages recognized in the group support the P. sphenops species complex as monophyletic with respect to outgroups, with eight mitochondrial 'major-lineages' diverged by ≥2% pairwise genetic distances. From general mixed Yule-coalescent models, we discovered (conservatively 10 species within our concatenated mitochondrial DNA dataset, 9 of which were strongly supported by subsequent multilocus Bayesian species delimitation and species tree analyses. Results suggested species-level diversity is underestimated or overestimated by at least ~15% in different lineages in the complex. Nonparametric statistics and coalescent simulations indicate genealogical discordance among our gene tree results has mainly derived from interspecific hybridization in the nuclear genome. However, mitochondrial DNA show little evidence for introgression, and our species delimitation results appear robust to effects of this process. Overall, our findings support the utility of combining multiple lines of genetic evidence and broad phylogeographical sampling to discover and validate species using coalescent-based methods. Our study also highlights the

Comparative analysis of the corps en cerise in several species of Laurencia (Ceramiales, Rhodophyta from the Atlantic Ocean

Directory of Open Access Journals (Sweden)

Mutue T. Fujii

2012-08-01

Full Text Available Different species of Laurencia have proven to be a rich source of natural products yielding interesting bioactive halogenated secondary metabolites, such as terpenoids and acetogenins. It is shown that such compounds are accumulated in the spherical, reniform to claviform refractive inclusions called corps en cerise (CC, which are intensively osmiophilic and located mainly in the cortical cells of the thalli and also in trichoblast cells. Up to now, it was believed that CC were present only in these two kinds of cells. Recently, however, a species of Laurencia, L. marilzae, with CC in all cells of the thallus, i.e., cortical, medullary, including the pericentral and axial cells, as well as in the trichoblasts, was described from the Canary Islands, and subsequently also reported to Brazil and Mexico. Within the Laurencia complex, only Laurencia species produce CC. Since the species of Laurencia are targets of interest for the prospection of bioactive substances due to their potential antibacterial, antifungal, anticholinesterasic, antileishmanial, cytotoxic, and antioxidant activities, the present paper carries out a comparative analysis of the corps en cerise in several species of Laurencia from the Atlantic Ocean to obtain basic information that can support natural product bioprospection projects. Our results show that the number and size of the CC are constant within a species, independent of the geographical distribution, corroborating their use for taxonomical purposes to differentiate groups of species that present a lower number from those that have a higher number. In this regard, there was a tendency for the number of CC to be higher in some species of Laurencia from the Canary Islands. The presence of CC can also be used to distinguish species in which these organelles are present in all cells of the thallus from those in which CC are restricted to the cortical cells. Among the species analyzed, L. viridis displayed the most varied

U.S. ocean acidification researchers: First national meeting

Science.gov (United States)

Cooley, Sarah R.; Kleypas, Joan; Benway, Heather

2011-09-01

Ocean Carbon and Biogeochemistry Program Ocean Acidification Principal Investigators' Meeting; Woods Hole, Massachusetts, 22-24 March 2011 ; Ocean acidification (OA) is the progressive decrease in seawater pH and change in inorganic carbon chemistry caused by uptake of anthropogenic carbon dioxide (CO2). Marine species respond to OA in multiple ways that could profoundly alter ocean ecosystems and the goods and services they provide to human communities. With major support from the National Oceanic and Atmospheric Administration (NOAA) and the U.S. National Science Foundation (NSF) and additional support from the U.S. Environmental Protection Agency (EPA), the Naval Postgraduate School, and the U.S. Geological Survey (USGS), the Ocean Carbon and Biogeochemistry (OCB) Project Office and Ocean Acidification Subcommittee (http://www.us-ocb.org/about/subcommittees.html) held the first multidisciplinary workshop for U.S. OA researchers at the Woods Hole Oceanographic Institution. The 112 attendees included ecologists, paleoceanographers, instrumentation specialists, chemists, biologists, economists, ocean and ecosystem modelers, and communications specialists.

Octocoral Species Assembly and Coexistence in Caribbean Coral Reefs.

Science.gov (United States)

Velásquez, Johanna; Sánchez, Juan A

2015-01-01

What are the determinant factors of community assemblies in the most diverse ecosystem in the ocean? Coral reefs can be divided in continental (i.e., reefs that develop on the continental shelf, including siliciclastic reefs) and oceanic (i.e., far off the continental shelf, usually on volcanic substratum); whether or not these habitat differences impose community-wide ecological divergence or species exclusion/coexistence with evolutionary consequences, is unknown. Studying Caribbean octocorals as model system, we determined the phylogenetic community structure in a coral reef community, making emphasis on species coexistence evidenced on trait evolution and environmental feedbacks. Forty-nine species represented in five families constituted the species pool from which a phylogenetic tree was reconstructed using mtDNA. We included data from 11 localities in the Western Caribbean (Colombia) including most reef types. To test diversity-environment and phenotype-environment relationships, phylogenetic community structure and trait evolution we carried out comparative analyses implementing ecological and evolutionary approaches. Phylogenetic inferences suggest clustering of oceanic reefs (e.g., atolls) contrasting with phylogenetic overdispersion of continental reefs (e.g., reefs banks). Additionally, atolls and barrier reefs had the highest species diversity (Shannon index) whereas phylogenetic diversity was higher in reef banks. The discriminant component analysis supported this differentiation between oceanic and continental reefs, where continental octocoral species tend to have greater calyx apertures, thicker branches, prominent calyces and azooxanthellate species. This analysis also indicated a clear separation between the slope and the remaining habitats, caused by the presence or absence of Symbiodinium. K statistic analysis showed that this trait is conserved as well as the branch shape. There was strong octocoral community structure with opposite diversity

Octocoral Species Assembly and Coexistence in Caribbean Coral Reefs.

Directory of Open Access Journals (Sweden)

Johanna Velásquez

Full Text Available What are the determinant factors of community assemblies in the most diverse ecosystem in the ocean? Coral reefs can be divided in continental (i.e., reefs that develop on the continental shelf, including siliciclastic reefs and oceanic (i.e., far off the continental shelf, usually on volcanic substratum; whether or not these habitat differences impose community-wide ecological divergence or species exclusion/coexistence with evolutionary consequences, is unknown.Studying Caribbean octocorals as model system, we determined the phylogenetic community structure in a coral reef community, making emphasis on species coexistence evidenced on trait evolution and environmental feedbacks. Forty-nine species represented in five families constituted the species pool from which a phylogenetic tree was reconstructed using mtDNA. We included data from 11 localities in the Western Caribbean (Colombia including most reef types. To test diversity-environment and phenotype-environment relationships, phylogenetic community structure and trait evolution we carried out comparative analyses implementing ecological and evolutionary approaches.Phylogenetic inferences suggest clustering of oceanic reefs (e.g., atolls contrasting with phylogenetic overdispersion of continental reefs (e.g., reefs banks. Additionally, atolls and barrier reefs had the highest species diversity (Shannon index whereas phylogenetic diversity was higher in reef banks. The discriminant component analysis supported this differentiation between oceanic and continental reefs, where continental octocoral species tend to have greater calyx apertures, thicker branches, prominent calyces and azooxanthellate species. This analysis also indicated a clear separation between the slope and the remaining habitats, caused by the presence or absence of Symbiodinium. K statistic analysis showed that this trait is conserved as well as the branch shape.There was strong octocoral community structure with opposite

Finding uncontested markets for European Fruit and Vegetables through applying the Blue Ocean Strategy

NARCIS (Netherlands)

Wubben, E.F.M.; Düsseldorf, S.; Batterink, M.H.

2012-01-01

Purpose – The purpose of this paper is to discover an uncontested market space in the European fruit and vegetables industry (EFVI), and thereby assess the ex-ante applicability of the Blue Ocean Strategy of Kim and Mauborgne. Design/methodology/approach – The search for an untapped market space

More losers than winners in a century of future Southern Ocean seafloor warming

Science.gov (United States)

Griffiths, Huw J.; Meijers, Andrew J. S.; Bracegirdle, Thomas J.

2017-10-01

The waters of the Southern Ocean are projected to warm over the coming century, with potential adverse consequences for native cold-adapted organisms. Warming waters have caused temperate marine species to shift their ranges poleward. The seafloor animals of the Southern Ocean shelf have long been isolated by the deep ocean surrounding Antarctica and the Antarctic Circumpolar Current, with little scope for southward migration. How these largely endemic species will react to future projected warming is unknown. By considering 963 invertebrate species, we show that within the current century, warming temperatures alone are unlikely to result in wholesale extinction or invasion affecting Antarctic seafloor life. However, 79% of Antarctica's endemic species do face a significant reduction in suitable temperature habitat (an average 12% reduction). Our findings highlight the species and regions most likely to respond significantly (negatively and positively) to warming and have important implications for future management of the region.

New species of millipedes occurring in the Czech Republic: species discovered in the period 2003-2017

Czech Academy of Sciences Publication Activity Database

Kocourek, P.; Tajovský, Karel; Dolejší, P.

2017-01-01

Roč. 6, December (2017), s. 27-30 ISSN 1861-0366 Institutional support: RVO:60077344 Keywords : Chordeumatida * Diplopoda * distribution * faunistics * Glomerida * Polydesmida * threatened species Subject RIV: EG - Zoology OBOR OECD: Zoology

Multi-scale sampling to evaluate assemblage dynamics in an oceanic marine reserve.

Science.gov (United States)

Thompson, Andrew R; Watson, William; McClatchie, Sam; Weber, Edward D

2012-01-01

To resolve the capacity of Marine Protected Areas (MPA) to enhance fish productivity it is first necessary to understand how environmental conditions affect the distribution and abundance of fishes independent of potential reserve effects. Baseline fish production was examined from 2002-2004 through ichthyoplankton sampling in a large (10,878 km(2)) Southern Californian oceanic marine reserve, the Cowcod Conservation Area (CCA) that was established in 2001, and the Southern California Bight as a whole (238,000 km(2) CalCOFI sampling domain). The CCA assemblage changed through time as the importance of oceanic-pelagic species decreased between 2002 (La Niña) and 2003 (El Niño) and then increased in 2004 (El Niño), while oceanic species and rockfishes displayed the opposite pattern. By contrast, the CalCOFI assemblage was relatively stable through time. Depth, temperature, and zooplankton explained more of the variability in assemblage structure at the CalCOFI scale than they did at the CCA scale. CalCOFI sampling revealed that oceanic species impinged upon the CCA between 2002 and 2003 in association with warmer offshore waters, thus explaining the increased influence of these species in the CCA during the El Nino years. Multi-scale, spatially explicit sampling and analysis was necessary to interpret assemblage dynamics in the CCA and likely will be needed to evaluate other focal oceanic marine reserves throughout the world.

The White Ocean hypothesis: a late Pleistocene Southern Ocean governed by Coccolithophores and driven by phosphorus

Directory of Open Access Journals (Sweden)

Jose Abel Flores

2012-07-01

Full Text Available Paleoproductivity is a critical component in past ocean biogeochemistry, but accurate reconstructions of productivity are often hindered by limited integration of proxies. Here, we integrate geochemical (phosphorus and micropaleontological proxies at millennial timescales, revealing that the coccolithophore record in the Subantarctic zone of the South Atlantic Ocean is driven largely by variations in marine phosphorus availability. A quantitative micropaleontological and geochemical analysis carried out in sediments retrieved from ODP Site 1089 (Subantarctic Zone reveals that most of the export productivity in this region over the last 0.5 my was due to coccolithophores. Glacial periods were generally intervals of high productivity, with productivity reaching a peak at terminations. Particularly high productivity was observed at Termination V and Termination IV, events that are characterized by high abundance of coccolithophores and maxima in the phosphorus/titanium and strontium/titanium records. We link the increase in productivity both to regional oceanographic phenomena, i.e., the northward displacement of the upwelling cell of the Antarctic divergence when the ice-sheet expanded, and to the increase in the inventory of phosphorus in the ocean due to enhanced transfer of this nutrient from continental margins during glacial lowstands in sea level. The Mid-Brunhes interval stands out from the rest of the record, being dominated by the small and highly-calcified species Gephyrocapsa caribbeanica that provides most of the carbonate in these sediments. This likely represents higher availability of phosphorus in the surface ocean, especially in mesotrophic and oligotrophic zones. Under these condition, some coccolithophore species developed an r-strategy (opportunistic species; growth rate maximized resulting in the bloom of G. caribbeanica. These seasonal blooms of may have inducedwhite tides similar to those observed today in Emiliania huxleyi.

Effects of near-future ocean acidification, fishing, and marine protection on a temperate coastal ecosystem.

Science.gov (United States)

Cornwall, Christopher E; Eddy, Tyler D

2015-02-01

Understanding ecosystem responses to global and local anthropogenic impacts is paramount to predicting future ecosystem states. We used an ecosystem modeling approach to investigate the independent and cumulative effects of fishing, marine protection, and ocean acidification on a coastal ecosystem. To quantify the effects of ocean acidification at the ecosystem level, we used information from the peer-reviewed literature on the effects of ocean acidification. Using an Ecopath with Ecosim ecosystem model for the Wellington south coast, including the Taputeranga Marine Reserve (MR), New Zealand, we predicted ecosystem responses under 4 scenarios: ocean acidification + fishing; ocean acidification + MR (no fishing); no ocean acidification + fishing; no ocean acidification + MR for the year 2050. Fishing had a larger effect on trophic group biomasses and trophic structure than ocean acidification, whereas the effects of ocean acidification were only large in the absence of fishing. Mortality by fishing had large, negative effects on trophic group biomasses. These effects were similar regardless of the presence of ocean acidification. Ocean acidification was predicted to indirectly benefit certain species in the MR scenario. This was because lobster (Jasus edwardsii) only recovered to 58% of the MR biomass in the ocean acidification + MR scenario, a situation that benefited the trophic groups lobsters prey on. Most trophic groups responded antagonistically to the interactive effects of ocean acidification and marine protection (46%; reduced response); however, many groups responded synergistically (33%; amplified response). Conservation and fisheries management strategies need to account for the reduced recovery potential of some exploited species under ocean acidification, nonadditive interactions of multiple factors, and indirect responses of species to ocean acidification caused by declines in calcareous predators. © 2014 Society for Conservation Biology.

Barcoding snakeheads (Teleostei, Channidae) revisited: Discovering greater species diversity and resolving perpetuated taxonomic confusions

Science.gov (United States)

Conte-Grand, Cecilia; Britz, Ralf; Dahanukar, Neelesh; Raghavan, Rajeev; Pethiyagoda, Rohan; Tan, Heok Hui; Hadiaty, Renny K.; Yaakob, Norsham S.

2017-01-01

Snakehead fishes of the family Channidae are predatory freshwater teleosts from Africa and Asia comprising 38 valid species. Snakeheads are important food fishes (aquaculture, live food trade) and have been introduced widely with several species becoming highly invasive. A channid barcode library was recently assembled by Serrao and co-workers to better detect and identify potential and established invasive snakehead species outside their native range. Comparing our own recent phylogenetic results of this taxonomically confusing group with those previously reported revealed several inconsistencies that prompted us to expand and improve on previous studies. By generating 343 novel snakehead coxI sequences and combining them with an additional 434 coxI sequences from GenBank we highlight several problems with previous efforts towards the assembly of a snakehead reference barcode library. We found that 16.3% of the channid coxI sequences deposited in GenBank are based on misidentifications. With the inclusion of our own data we were, however, able to solve these cases of perpetuated taxonomic confusion. Different species delimitation approaches we employed (BIN, GMYC, and PTP) were congruent in suggesting a potentially much higher species diversity within snakeheads than currently recognized. In total, 90 BINs were recovered and within a total of 15 currently recognized species multiple BINs were identified. This higher species diversity is mostly due to either the incorporation of undescribed, narrow range, endemics from the Eastern Himalaya biodiversity hotspot or the incorporation of several widespread species characterized by deep genetic splits between geographically well-defined lineages. In the latter case, over-lumping in the past has deflated the actual species numbers. Further integrative approaches are clearly needed for providing a better taxonomic understanding of snakehead diversity, new species descriptions and taxonomic revisions of the group. PMID

Ocean climate indicators: A monitoring inventory and plan for tracking climate change in the north-central California coast and ocean region

Science.gov (United States)

Duncan, Benet; Higgason, Kelley; Suchanek, Tom; Largier, John; Stachowicz, Jay; Allen, Sarah; Bograd, Steven; Breen, R.; Gellerman, Holly; Hill, Tessa; Jahncke, Jaime; Johnson, Rebecca L.; Lonhart, Steve I.; Morgan, Steven; Wilkerson, Frances; Roletto, Jan

2013-01-01

The impacts of climate change, defined as increasing atmospheric and oceanic carbon dioxide and associated increases in average global temperature and oceanic acidity, have been observed both globally and on regional scales, such as in the North-central California coast and ocean, a region that extends from Point Arena to Point Año Nuevo and includes the Pacific coastline of the San Francisco Bay Area. Because of the high economic and ecological value of the region’s marine environment, the Gulf of the Farallones National Marine Sanctuary (GFNMS) and other agencies and organizations have recognized the need to evaluate and plan for climate change impacts. Climate change indicators can be developed on global, regional, and site-specific spatial scales, and they provide information about the presence and potential impacts of climate change. While indicators exist for the nation and for the state of California as a whole, no system of ocean climate indicators exist that specifically consider the unique characteristics of the California coast and ocean region. To that end, GFNMS collaborated with over 50 regional, federal, and state natural resource managers, research scientists, and other partners to develop a set of 2 ocean climate indicators specific to this region. A smaller working group of 13 regional partners developed monitoring goals, objectives, strategies, and activities for the indicators and recommended selected species for biological indicators, resulting in the Ocean Climate Indicators Monitoring Inventory and Plan. The working group considered current knowledge of ongoing monitoring, feasibility of monitoring, costs, and logistics in selecting monitoring activities and selected species.

Estuary-ocean connectivity: fast physics, slow biology.

Science.gov (United States)

Raimonet, Mélanie; Cloern, James E

2017-06-01

Estuaries are connected to both land and ocean so their physical, chemical, and biological dynamics are influenced by climate patterns over watersheds and ocean basins. We explored climate-driven oceanic variability as a source of estuarine variability by comparing monthly time series of temperature and chlorophyll-a inside San Francisco Bay with those in adjacent shelf waters of the California Current System (CCS) that are strongly responsive to wind-driven upwelling. Monthly temperature fluctuations inside and outside the Bay were synchronous, but their correlations weakened with distance from the ocean. These results illustrate how variability of coastal water temperature (and associated properties such as nitrate and oxygen) propagates into estuaries through fast water exchanges that dissipate along the estuary. Unexpectedly, there was no correlation between monthly chlorophyll-a variability inside and outside the Bay. However, at the annual scale Bay chlorophyll-a was significantly correlated with the Spring Transition Index (STI) that sets biological production supporting fish recruitment in the CCS. Wind forcing of the CCS shifted in the late 1990s when the STI advanced 40 days. This shift was followed, with lags of 1-3 years, by 3- to 19-fold increased abundances of five ocean-produced demersal fish and crustaceans and 2.5-fold increase of summer chlorophyll-a in the Bay. These changes reflect a slow biological process of estuary-ocean connectivity operating through the immigration of fish and crustaceans that prey on bivalves, reduce their grazing pressure, and allow phytoplankton biomass to build. We identified clear signals of climate-mediated oceanic variability in this estuary and discovered that the response patterns vary with the process of connectivity and the timescale of ocean variability. This result has important implications for managing nutrient inputs to estuaries connected to upwelling systems, and for assessing their responses to changing

Tracking macroalgae introductions in North Atlantic oceanic islands

Science.gov (United States)

Micael, Joana; Parente, Manuela I.; Costa, Ana C.

2014-06-01

The Azores archipelago was selected as a case study since there are few studies on macroalgae introduction in oceanic islands. While at a global scale, around 3 % of macroalgae are considered non-indigenous; in the remote oceanic islands of the Azores, over 6 % of the marine algal flora is non-indigenous. The taxa distribution pattern of non-indigenous species in the Azores is significantly different from the distribution pattern in the globe. The most representative group was Rhodophyta species, being 84 % of the total non-indigenous macroalgae, mainly introduced via maritime traffic. This study highlights the vulnerability of remote islands to the introduction of macroalgae and the need to develop further studies on other archipelagos to understand whether the observed vulnerability is generally characteristic of oceanic islands. The development of local monitoring and mitigation programs and the necessity of regulatory and preventive measures for the maritime traffic vector are strongly suggested.

The Oceans 2015 Initiative, Part I - An updated synthesis of the observed and projected impacts of climate change on physical and biological processes in the oceans

International Nuclear Information System (INIS)

Howes, Ella L.; Joos, Fortunat; Eakin, Mark; Gattuso, Jean-Pierre

2015-01-01

The oceans have absorbed approximately 93% of the excess heat caused by global warming. Warming increases stratification, limiting the circulation of nutrients from deep waters to the surface. There is evidence that enhanced stratification and increasing temperature are causing a decline in dissolved oxygen concentration and expanding existing oxygen minimum zones (OMZs). Approximately 26% of anthropogenic CO 2 is absorbed by the oceans, resulting in a reduction in pH and carbonate ion concentration, termed ocean acidification. Anthropogenic CO 2 has caused global ocean pH to decrease by 0.1 units since the start of the Industrial Revolution. The ocean ecosystems are responding to the changing environment, but at different rates and magnitudes and with interspecific and geographic variation in responses. Warming causes shifts in species' geographic distribution, abundance, migration patterns and phenology. Organisms that produce shells and skeletons from calcium carbonate are at most risk from ocean acidification as it lowers the saturation state of the mineral, favouring a dissolution reaction. To date, there are few observations of ocean acidification effects in natural communities; however, experimental evidence suggests that the risk to ecosystems will increase over the coming decades. Decreasing dissolved oxygen concentrations and expanding OMZs will favour anaerobic metabolisers such as bacteria and small microbes whilst reducing habitat for larger, oxygen dependent organisms. The interaction of multiple drivers can amplify or alleviate each other's effects. It is likely that marine organisms will experience a combination of warming, acidification and declining oxygen concentrations as well as regionally specific local stressors. This makes it difficult to predict the responses of individual species to multiple drivers, and species interactions make ecosystem- based projections challenging. Using the available evidence, projections have been

76 FR 65700 - Atlantic Highly Migratory Species; Advisory Panel for Atlantic Highly Migratory Species Southeast...

Science.gov (United States)

2011-10-24

.... Virgin Islands and Puerto Rico, and each of the constituent interstate commissions: the Atlantic States... DEPARTMENT OF COMMERCE National Oceanic and Atmospheric Administration RIN 0648-XA776 Atlantic Highly Migratory Species; Advisory Panel for Atlantic Highly Migratory Species Southeast Data, Assessment...

Ocean warming ameliorates the negative effects of ocean acidification on Paracentrotus lividus larval development and settlement.

Science.gov (United States)

García, Eliseba; Clemente, Sabrina; Hernández, José Carlos

2015-09-01

Ocean warming and acidification both impact marine ecosystems. All organisms have a limited body temperature range, outside of which they become functionally constrained. Beyond the absolute extremes of this range, they cannot survive. It is hypothesized that some stressors can present effects that interact with other environmental variables, such as ocean acidification (OA) that have the potential to narrow the thermal range where marine species are functional. An organism's response to ocean acidification can therefore be highly dependent on thermal conditions. This study evaluated the combined effects of predicted ocean warming conditions and acidification, on survival, development, and settlement, of the sea urchin Paracentrotus lividus. Nine combined treatments of temperature (19.0, 20.5 and 22.5 °C) and pH (8.1, 7.7 and 7.4 units) were carried out. All of the conditions tested were either within the current natural ranges of seawater pH and temperature or are within the ranges that have been predicted for the end of the century, in the sampling region (Canary Islands). Our results indicated that the negative effects of low pH on P. lividus larval development and settlement will be mitigated by a rise in seawater temperature, up to a thermotolerance threshold. Larval development and settlement performance of the sea urchin P. lividus was enhanced by a slight increase in temperature, even under lowered pH conditions. However, the species did show negative responses to the levels of ocean warming and acidification that have been predicted for the turn of the century. Copyright © 2015 Elsevier Ltd. All rights reserved.

Impetus and barriers to teaching ocean literacy: A perspective from landlocked middle school science teachers

Science.gov (United States)

Gillan, Amy Larrison

The demand for a more ocean literate citizenry is growing rapidly in response to an ocean increasingly in peril. Discovering how to include students far removed from the ocean in our teaching about the ocean is imperative to meeting that charge. The purpose of the present study was to investigate the extent to which middle school science teachers in landlocked states addressed important ocean literacy concepts and what they perceived to be barriers and motivators to their doing so. This descriptive study was based on a nation-wide survey of middle school science teachers and content analyses of their most commonly used science textbooks and their state science standards. Data was analyzed quantitatively. Results indicated that landlocked and coastal teachers are similar in terms of their infrequency of teaching about the ocean, yet a number of their perceptions of barriers and motivators to do so vary. The barrier most often mentioned was middle school state science standards, which characteristically ignore the ocean sciences. The results are discussed in terms of their impact on ocean literacy professional development providers, science textbook publishers, and state science standards revision committees.

Discovering Hands - México

OpenAIRE

Salamanca Cárdenas, Daniela; Castelblanco Domínguez, Junio Andrés; Aguilar Ardila, Laura Andrea

2016-01-01

El modelo de Discovering Hands ha sido reconocido internacionalmente como un proyecto innovador que se ha expandido por diferentes países del mundo, como Austria, y se ha empezado a estudiar la propuesta en países como República Checa, India y Colombia. (Discovering Hands, 2016). Esto se debe a que no solo mejora el tratamiento de cáncer de mama, sino que también reduce los costos totales de tratamiento de la enfermedad y aumenta la fuerza laborar de los países donde esté presente. Al represe...

Mercury Biogeochemical Cycling in the Ocean and Policy Implications

OpenAIRE

Mason, Robert P.; Choi, Anna L.; Fitzgerald, William F.; Hammerschmidt, Chad R.; Lamborg, Carl H.; Soerensen, Anne L.; Sunderland, Elsie M.

2012-01-01

Anthropogenic activities have enriched mercury in the biosphere by at least a factor of three, leading to increases in total mercury (Hg) in the surface ocean. However, the impacts on ocean fish and associated trends in human exposure as a result of such changes are less clear. Here we review our understanding of global mass budgets for both inorganic and methylated Hg species in ocean seawater. We consider external inputs from atmospheric deposition and rivers as well as internal production ...

Diversity and distribution of hyperiid amphipods along a latitudinal transect in the Atlantic Ocean

Science.gov (United States)

Burridge, Alice K.; Tump, Marloes; Vonk, Ronald; Goetze, Erica; Peijnenburg, Katja T. C. A.

2017-11-01

As commensals and parasitoids of gelatinous plankton, hyperiid amphipods play unique and important ecological roles in pelagic food webs. Because the diversity and biogeography of this group in oceanic waters is poorly known, we examined diversity and distribution patterns of hyperiids along a basin-scale meridional transect in the Atlantic Ocean (Atlantic Meridional Transect cruise 22). Hyperiids were collected from epipelagic and upper mesopelagic depths at 27 stations between 39°N and 45°S. A total of 70 species in 36 genera and 17 families were identified, the majority of which belonged to the epipelagic Physocephalata infraorder. We observed maximum species and genus richness in the equatorial upwelling region (up to 35 species, 27 genera per station; 7°N-8°S), which appeared largely driven by increased diversity in the superfamily Platysceloidea, as well as a significant and positive relationship between species richness and sea surface temperature. Cluster analyses of hyperiid species assemblages along the transect broadly supported a division into gyral, equatorial, transitional, and subantarctic assemblages, congruent with Longhurst's biogeochemical provinces. Steepest transitions in hyperiid species composition occurred at the southern subtropical convergence zone (34-38°S). The majority of zooplankton groups show maximal diversity in subtropical waters, and our observations of equatorial maxima in species and genus richness for hyperiids suggest that the mechanisms controlling diversity in this group are distinct from other zooplanktonic taxa. These patterns may be driven by the distribution and diversity of gelatinous hosts for hyperiids, which remain poorly characterized at ocean basin scales. The data reported here provide new distributional records for epipelagic and upper mesopelagic hyperiids across six major oceanic provinces in the Atlantic Ocean.

Multi-scale sampling to evaluate assemblage dynamics in an oceanic marine reserve.

Directory of Open Access Journals (Sweden)

Andrew R Thompson

Full Text Available To resolve the capacity of Marine Protected Areas (MPA to enhance fish productivity it is first necessary to understand how environmental conditions affect the distribution and abundance of fishes independent of potential reserve effects. Baseline fish production was examined from 2002-2004 through ichthyoplankton sampling in a large (10,878 km(2 Southern Californian oceanic marine reserve, the Cowcod Conservation Area (CCA that was established in 2001, and the Southern California Bight as a whole (238,000 km(2 CalCOFI sampling domain. The CCA assemblage changed through time as the importance of oceanic-pelagic species decreased between 2002 (La Niña and 2003 (El Niño and then increased in 2004 (El Niño, while oceanic species and rockfishes displayed the opposite pattern. By contrast, the CalCOFI assemblage was relatively stable through time. Depth, temperature, and zooplankton explained more of the variability in assemblage structure at the CalCOFI scale than they did at the CCA scale. CalCOFI sampling revealed that oceanic species impinged upon the CCA between 2002 and 2003 in association with warmer offshore waters, thus explaining the increased influence of these species in the CCA during the El Nino years. Multi-scale, spatially explicit sampling and analysis was necessary to interpret assemblage dynamics in the CCA and likely will be needed to evaluate other focal oceanic marine reserves throughout the world.

Altered neurotransmitter function in CO2-exposed stickleback (Gasterosteus aculeatus): a temperate model species for ocean acidification research.

Science.gov (United States)

Lai, Floriana; Jutfelt, Fredrik; Nilsson, Göran E

2015-01-01

Studies on the consequences of ocean acidification for the marine ecosystem have revealed behavioural changes in coral reef fishes exposed to sustained near-future CO2 levels. The changes have been linked to altered function of GABAergic neurotransmitter systems, because the behavioural alterations can be reversed rapidly by treatment with the GABAA receptor antagonist gabazine. Characterization of the molecular mechanisms involved would be greatly aided if these can be examined in a well-characterized model organism with a sequenced genome. It was recently shown that CO2-induced behavioural alterations are not confined to tropical species, but also affect the three-spined stickleback, although an involvement of the GABAA receptor was not examined. Here, we show that loss of lateralization in the stickleback can be restored rapidly and completely by gabazine treatment. This points towards a worrying universality of disturbed GABAA function after high-CO2 exposure in fishes from tropical to temperate marine habitats. Importantly, the stickleback is a model species with a sequenced and annotated genome, which greatly facilitates future studies on underlying molecular mechanisms.

Vulnerability of teleosts caught by the pelagic tuna longline fleets in South Atlantic and Western Indian Oceans

Science.gov (United States)

Lucena-Frédou, Flávia; Kell, Laurie; Frédou, Thierry; Gaertner, Daniel; Potier, Michel; Bach, Pascal; Travassos, Paulo; Hazin, Fábio; Ménard, Frédéric

2017-06-01

Productivity and Susceptibility Analysis (PSA) is a methodology for evaluating the vulnerability of a stock based on its biological productivity and susceptibility to fishing. In this study, we evaluated the vulnerability of 60 stocks of tuna, billfishes and other teleosts caught by the tuna longline fleets operating in the South Atlantic and Indian Ocean using a semi-quantitative PSA. We (a) evaluated the vulnerability of the species in the study areas; (b) compared the vulnerability of target and non-target species and oceans; (c) analyzed the sensitivity of data entry; and (d) compared the results of the PSA to other fully quantitative assessment methods. Istiophoridae exhibited the highest scores for vulnerability. The top 10 species at risk were: Atlantic Istiophorus albicans; Indian Ocean Istiompax indica; Atlantic Makaira nigricans and Thunnus alalunga; Indian Ocean Xiphias gladius; Atlantic T. albacares, Gempylus serpens, Ranzania laevis and X. gladius; and Indian Ocean T. alalunga. All species considered at high risk were targeted or were commercialized bycatch, except for the Atlantic G. serpens and R. laevis which were discarded, and may be considered as a false positive. Those species and others at high risk should be prioritized for further assessment and/or data collection. Most species at moderate risk were bycatch species kept for sale. Conversely, species classified at low risk were mostly discarded. Overall, species at high risk were overfished and/or subjected to overfishing. Moreover, all species considered to be within extinction risk (Critically Endangered, Endangered and Vulnerable) were in the high-risk category. The good concordance between approaches corroborates the results of our analysis. PSA is not a replacement for traditional stock assessments, where a stock is assessed at regular intervals to provide management advice. It is of importance, however, where there is uncertainty about catches and life history parameters, since it can

Blue ocean leadership.

Science.gov (United States)

Kim, W Chan; Mauborgne, Renée

2014-05-01

Ten years ago, two INSEAD professors broke ground by introducing "blue ocean strategy," a new model for discovering uncontested markets that are ripe for growth. In this article, they apply their concepts and tools to what is perhaps the greatest challenge of leadership: closing the gulf between the potential and the realized talent and energy of employees. Research indicates that this gulf is vast: According to Gallup, 70% of workers are disengaged from their jobs. If companies could find a way to convert them into engaged employees, the results could be transformative. The trouble is, managers lack a clear understanding of what changes they could make to bring out the best in everyone. Here, Kim and Mauborgne offer a solution to that problem: a systematic approach to uncovering, at each level of the organization, which leadership acts and activities will inspire employees to give their all, and a process for getting managers throughout the company to start doing them. Blue ocean leadership works because the managers' "customers"-that is, the people managers oversee and report to-are involved in identifying what's effective and what isn't. Moreover, the approach doesn't require leaders to alter who they are, just to undertake a different set of tasks. And that kind of change is much easier to implement and track than changes to values and mind-sets.

Novel Pestivirus Species in Pigs, Austria, 2015.

Science.gov (United States)

Lamp, Benjamin; Schwarz, Lukas; Högler, Sandra; Riedel, Christiane; Sinn, Leonie; Rebel-Bauder, Barbara; Weissenböck, Herbert; Ladinig, Andrea; Rümenapf, Till

2017-07-01

A novel pestivirus species was discovered in a piglet-producing farm in Austria during virologic examinations of congenital tremor cases. The emergence of this novel pestivirus species, provisionally termed Linda virus, in domestic pigs may have implications for classical swine fever virus surveillance and porcine health management.

78 FR 65974 - Atlantic Highly Migratory Species; Advisory Panel for Atlantic Highly Migratory Species Southeast...

Science.gov (United States)

2013-11-04

... Management Councils, the 18 states in the Atlantic and Gulf of Mexico, both the U.S. Virgin Islands and... DEPARTMENT OF COMMERCE National Oceanic and Atmospheric Administration RIN 0648-XC935 Atlantic Highly Migratory Species; Advisory Panel for Atlantic Highly Migratory Species Southeast Data, Assessment...

Differential tolerances to ocean acidification by parasites that share the same host.

Science.gov (United States)

MacLeod, C D; Poulin, R

2015-06-01

Ocean acidification is predicted to cause major changes in marine ecosystem structure and function over the next century, as species-specific tolerances to acidified seawater may alter previously stable relationships between coexisting organisms. Such differential tolerances could affect marine host-parasite associations, as either host or parasite may prove more susceptible to the stressors associated with ocean acidification. Despite their important role in many ecological processes, parasites have not been studied in the context of ocean acidification. We tested the effects of low pH seawater on the cercariae and, where possible, the metacercariae of four species of marine trematode parasite. Acidified seawater (pH 7.6 and 7.4, 12.5 °C) caused a 40-60% reduction in cercarial longevity and a 0-78% reduction in metacercarial survival. However, the reduction in longevity and survival varied distinctly between parasite taxa, indicating that the effects of reduced pH may be species-specific. These results suggest that ocean acidification has the potential to reduce the transmission success of many trematode species, decrease parasite abundance and alter the fundamental regulatory role of multi-host parasites in marine ecosystems. Copyright © 2015 Australian Society for Parasitology Inc. Published by Elsevier Ltd. All rights reserved.

NWFSC OA facility water chemistry - Ocean acidification species exposure experimental facility

Data.gov (United States)

National Oceanic and Atmospheric Administration, Department of Commerce — We have developed a unique facility for conducting high-quality experiments on marine organisms in seawater with controlled carbon chemistry conditions. The...

Oceanic, Latitudinal, and Sex-Specific Variation in Demography of a Tropical Deepwater Snapper across the Indo-Pacific Region

Directory of Open Access Journals (Sweden)

Ashley J. Williams

2017-12-01

Full Text Available Deepwater tropical fisheries provide an important source of income and protein to Pacific and Indian Ocean coastal communities who are highly dependent on fish for food security. The development of quantitative assessments and management strategies for these deepwater fisheries has been hindered by insufficient biological and fisheries data. We examine the age-specific demography of the pygmy ruby snapper Etelis carbunculus, an important target species in tropical deepwater fisheries, across 90° of longitude and 20° of latitude in the Pacific and Indian Oceans. Our results show that growth of E. carbunculus varies significantly between oceans and sexes and across latitudes in both oceans. Estimates of natural and fishing mortality were similar between oceans, but higher for females than males in both oceans. Evidence of greater fishing pressure on females than males is likely due to the larger size-at-age of females compared to males, assuming that selectivity of the fishing gear is related directly to fish size. Sex ratios were significantly female biased in both oceans despite this species being gonochoristic, and maturity schedules were similar between sexes in the Pacific Ocean. This species exhibits a protracted spawning season from mid-spring to autumn (i.e., October to May in the Pacific Ocean. These results represent the first estimates of age-specific demographic parameters for E. carbunculus, and provide the foundation for the development of the first species-specific assessment models and harvest strategies for the species. Future stock assessment models for E. carbunculus should consider sex-specific demographic parameters and spatial variation in demography. Our results reveal substantial differences in biology between E. carbunculus and the giant ruby snapper E. sp., a cryptic congeneric species, and thus contribute to greater clarity in managing fisheries that are dependent on these two species. Furthermore, the improved

Towards accounting for dissolved iron speciation in global ocean models

Directory of Open Access Journals (Sweden)

A. Tagliabue

2011-10-01

Full Text Available The trace metal iron (Fe is now routinely included in state-of-the-art ocean general circulation and biogeochemistry models (OGCBMs because of its key role as a limiting nutrient in regions of the world ocean important for carbon cycling and air-sea CO₂ exchange. However, the complexities of the seawater Fe cycle, which impact its speciation and bioavailability, are simplified in such OGCBMs due to gaps in understanding and to avoid high computational costs. In a similar fashion to inorganic carbon speciation, we outline a means by which the complex speciation of Fe can be included in global OGCBMs in a reasonably cost-effective manner. We construct an Fe speciation model based on hypothesised relationships between rate constants and environmental variables (temperature, light, oxygen, pH, salinity and assumptions regarding the binding strengths of Fe complexing organic ligands and test hypotheses regarding their distributions. As a result, we find that the global distribution of different Fe species is tightly controlled by spatio-temporal environmental variability and the distribution of Fe binding ligands. Impacts on bioavailable Fe are highly sensitive to assumptions regarding which Fe species are bioavailable and how those species vary in space and time. When forced by representations of future ocean circulation and climate we find large changes to the speciation of Fe governed by pH mediated changes to redox kinetics. We speculate that these changes may exert selective pressure on phytoplankton Fe uptake strategies in the future ocean. In future work, more information on the sources and sinks of ocean Fe ligands, their bioavailability, the cycling of colloidal Fe species and kinetics of Fe-surface coordination reactions would be invaluable. We hope our modeling approach can provide a means by which new observations of Fe speciation can be tested against hypotheses of the processes present in governing the ocean Fe cycle in an

76 FR 74778 - Endangered Species

Science.gov (United States)

2011-12-01

.... 16439] Endangered Species AGENCY: National Marine Fisheries Service (NMFS), National Oceanic and... has been issued under the authority of the Endangered Species Act of 1973, as amended (ESA; 16 U.S.C. 1531 et seq.) and the regulations governing the taking, importing, and exporting of endangered and...

Green Ships: Keeping Oceans Blue

Science.gov (United States)

Katsioloudis, Petros J.

2010-01-01

The marine transport sector contributes significantly to air and water pollution, particularly in coastal areas. In the oceans, the threat to marine life comes in various forms, such as overexploitation and harvesting, dumping of waste, pollution, alien species, land reclamation, dredging, and global climate change. A congressional research report…

Invasive species unchecked by climate - response

DEFF Research Database (Denmark)

Burrows, Michael T.; Schoeman, David S.; Duarte, Carlos M.

2012-01-01

environments. This may be particularly true in the world's boreal oceans as melting sea ice facilitates new migratory passages between the Atlantic and Pacific Oceans. Moreover, as the ebb and flow of biodiversity intensifies under anthropogenic climate change, novel climates and communities of species......Hulme points out that observed rates of range expansion by invasive alien species are higher than the median speed of isotherm movement over the past 50 years, which in turn has outpaced the rates of climate-associated range changes of marine and terrestrial species. This is not surprising, given...... of climate-change-induced range shifts between native and alien species are meaningful only after the initial invasive spread has reached a stable range boundary. A focus on regions with high velocities of climate change, and on regions such as the tropics where novel thermal niches are being created, should...

New and interesting species of the genus Muelleria (Bacillariophyta) from the Antarctic region and South Africa

Science.gov (United States)

Van De Vijver, B.; Mataloni, G.; Stanish, L.; Spaulding, S.A.

2010-01-01

During a survey of the terrestrial diatom flora of some sub-Antarctic islands in the southern Indian and Atlantic Oceans and of the Antarctic continent, more than 15 taxa belonging to the genus Muelleria were observed. Nine of these taxa are described as new species using light and scanning electron microscopy. Comments are made on their systematic position and how they are distinguished from other species in the genus. Additionally, two previously unrecognized taxa within the genus were discovered in samples from South Africa. One of these, Muelleria taylorii Van de Vijver & Cocquyt sp. nov., is new to science; the other, Muelleria vandermerwei (Cholnoky) Van de Vijver & Cocquyt nov. comb., had been included in the genus Diploneis. The large number of new Muelleria taxa on the (sub)-Antarctic locations is not surprising. Species in Muelleria occur rarely in collections; in many habitats, it is unusual to find more than 1-2 valves in any slide preparation. As a result, records are scarce. The practice of "force-fitting" (shoehorning) specimens into descriptions from common taxonomic keys (and species drift) results in European species, such as M. gibbula and M. linearis, being applied to Antarctic forms in ecological studies. Finally, the typical terrestrial habitats of soils, mosses and ephemeral water bodies of most of these taxa have been poorly studied in the past.

New species of the genera Havelockia and Thyone (Echinodermata: Holothuroidea) and first record of T. crassidisca from the southwestern Atlantic Ocean.

Science.gov (United States)

Martins, Luciana; Tavares, Marcos

2018-04-12

Two new species in the genera Thyone and Havelockia are described and illustrated based upon specimens collected from off the southeastern Brazilian coast. Thyone florianoi sp. nov. is characterized by having two pillared body wall tables with four-holed discs and introvert with multilocular tables. Thyone crassidisca is recorded herein for the first time from the South Atlantic Ocean (Brazil). Havelockia mansoae sp. nov. is distinctive in having two pillared body wall tables with four-holed discs and introvert with plates. This is the first record of the genus Havelockia from Brazilian waters.

Ocean warming and acidification synergistically increase coral mortality

Science.gov (United States)

Prada, F.; Caroselli, E.; Mengoli, S.; Brizi, L.; Fantazzini, P.; Capaccioni, B.; Pasquini, L.; Fabricius, K. E.; Dubinsky, Z.; Falini, G.; Goffredo, S.

2017-01-01

Organisms that accumulate calcium carbonate structures are particularly vulnerable to ocean warming (OW) and ocean acidification (OA), potentially reducing the socioeconomic benefits of ecosystems reliant on these taxa. Since rising atmospheric CO2 is responsible for global warming and increasing ocean acidity, to correctly predict how OW and OA will affect marine organisms, their possible interactive effects must be assessed. Here we investigate, in the field, the combined temperature (range: 16-26 °C) and acidification (range: pHTS 8.1-7.4) effects on mortality and growth of Mediterranean coral species transplanted, in different seasonal periods, along a natural pH gradient generated by a CO2 vent. We show a synergistic adverse effect on mortality rates (up to 60%), for solitary and colonial, symbiotic and asymbiotic corals, suggesting that high seawater temperatures may have increased their metabolic rates which, in conjunction with decreasing pH, could have led to rapid deterioration of cellular processes and performance. The net calcification rate of the symbiotic species was not affected by decreasing pH, regardless of temperature, while in the two asymbiotic species it was negatively affected by increasing acidification and temperature, suggesting that symbiotic corals may be more tolerant to increasing warming and acidifying conditions compared to asymbiotic ones.

Contrasting physiological responses to future ocean acidification among Arctic copepod populations

DEFF Research Database (Denmark)

Thor, Peter; Bailey, Allison; Dupont, Sam

2018-01-01

Widespread ocean acidification (OA) is modifying the chemistry of the global ocean, and the Arctic is recognised as the region where the changes will progress at the fastest rate. Moreover, Arctic species show lower capacity for cellular homeostasis and acid-base regulation rendering them...

Ocean sunfish as indicators for the 'rise of slime'.

Science.gov (United States)

Grémillet, David; White, Craig R; Authier, Matthieu; Dorémus, Ghislain; Ridoux, Vincent; Pettex, Emeline

2017-12-04

Overfishing and ocean warming are drastically altering the community composition and size structure of marine ecosystems, eliminating large bodied species [1]. Against a backdrop of such environmental change, the heaviest of all bony fish, the ocean sunfish (Mola mola), seems an improbable survivor. Indeed this indolent giant is killed globally as bycatch, and is listed as 'Vulnerable'[2]. We undertook the most extensive aerial surveys of sunfish ever conducted and found surprisingly high abundances off the Atlantic and Mediterranean coasts of Western Europe. With up to 475 individuals per 100 km 2 , these figures are one order of magnitude higher than abundance estimates for other areas [3-5]. Using bioenergetic modelling, we estimate that each sunfish requires 71 kg day -1 of jellyfish, a biomass intake more than an order of magnitude greater than predicted for a similarly sized teleost. Scaled up to the population level, this equates to a remarkable 20,774 tonnes day -1 of predated jellyfish across our study area in summer. Sunfish abundance may be facilitated by overfishing and ocean warming, which together cause reduced predation of sunfish by sharks and elevated jellyfish biomass. Our combined survey and bioenergetic data provide the first-ever estimate of spatialized ocean sunfish daily food requirements, and stress the importance of this species as a global indicator for the 'rise of slime'. This hypothesis posits that, in an overfished world ocean exposed to global warming, gelatinous zooplankton should flourish, to the detriment of other mesotrophic species such as small pelagic fish, causing irreversible trophic cascades as well as a series of other environmental and economic issues. Copyright © 2017 Elsevier Ltd. All rights reserved.

Ocean acidification alters fish populations indirectly through habitat modification

Science.gov (United States)

Nagelkerken, Ivan; Russell, Bayden D.; Gillanders, Bronwyn M.; Connell, Sean D.

2016-01-01

Ocean ecosystems are predicted to lose biodiversity and productivity from increasing ocean acidification. Although laboratory experiments reveal negative effects of acidification on the behaviour and performance of species, more comprehensive predictions have been hampered by a lack of in situ studies that incorporate the complexity of interactions between species and their environment. We studied CO2 vents from both Northern and Southern hemispheres, using such natural laboratories to investigate the effect of ocean acidification on plant-animal associations embedded within all their natural complexity. Although we substantiate simple direct effects of reduced predator-avoidance behaviour by fishes, as observed in laboratory experiments, we here show that this negative effect is naturally dampened when fish reside in shelter-rich habitats. Importantly, elevated CO2 drove strong increases in the abundance of some fish species through major habitat shifts, associated increases in resources such as habitat and prey availability, and reduced predator abundances. The indirect effects of acidification via resource and predator alterations may have far-reaching consequences for population abundances, and its study provides a framework for a more comprehensive understanding of increasing CO2 emissions as a driver of ecological change.

Feedback interactions between trace metal nutrients and phytoplankton in the ocean

Directory of Open Access Journals (Sweden)

William eSunda

2012-06-01

Full Text Available In addition to control by major nutrient elements (nitrogen, phosphorus, and silicon the productivity and species composition of marine phytoplankton communities are affected by a number of trace metal nutrients (iron, zinc, cobalt, manganese, copper, and cadmium. Of these, iron exerts the greatest limiting influence on carbon fixation rates and has the greatest effect on algal species diversity. It also plays an important role in limiting di-nitrogen (N2 fixation rates, and thus exerts an important influence on ocean inventories of biologically available fixed nitrogen. Because of these effects, iron is thought to play a key role in controlling the biological cycles of carbon and nitrogen in the ocean, including the biological transfer of carbon to the deep sea, the so-called biological CO2 pump, which helps regulate atmospheric CO2 levels and CO2-linked global warming. Other trace metal nutrients (zinc, cobalt, copper, and manganese have a lesser effect on productivity; but may exert an important influence on the species composition of algal communities because of large differences in metal requirements among algal species. The interactions between trace metals and ocean plankton are reciprocal: not only do the metals affect the plankton, but the plankton regulate the distributions, chemical speciation, and cycling of these metals through cellular uptake and regeneration processes, downward flux of biogenic particles, cellular release of organic chelators, and mediation of redox reactions. This two way interaction has influenced not only the biology and chemistry of the modern ocean, but has had a profound influence on biogeochemistry of the ocean and earth system as a whole, and on the evolution marine and terrestrial biology over geologic history.

Deep-Sea Corals: A New Oceanic Archive

National Research Council Canada - National Science Library

Adkins, Jess

1998-01-01

Deep-sea corals are an extraordinary new archive of deep ocean behavior. The species Desmophyllum cristagalli is a solitary coral composed of uranium rich, density banded aragonite that I have calibrated for several paleoclimate tracers...

Did the ancient egyptians discover Algol?

Science.gov (United States)

Jetsu, L.; Porceddu, S.; Porceddu, S.; Lyytinen, J.; Kajatkari, P.; Markkanen, T.; Toivari-Viitala, J.

2013-02-01

Fabritius discovered the first variable star, Mira, in 1596. Holwarda determined the 11 months period of Mira in 1638. Montanari discovered the next variable star, Algol, in 1669. Its period, 2.867 days, was determined by Goodricke (178). Algol was associated with demon-like creatures, "Gorgon" in ancient Greek and "ghoul" in ancient Arab mythology. This indicates that its variability was discovered much before 1669 (Wilk 1996), but this mythological evidence is ambiguous (Davis 1975). For thousands of years, the Ancient Egyptian Scribes (AES) observed stars for timekeeping in a region, where there are nearly 300 clear nights a year. We discovered a significant periodicity of 2.850 days in their calendar for lucky and unlucky days dated to 1224 BC, "the Cairo Calendar". Several astrophysical and astronomical tests supported our conclusion that this was the period of Algol three millennia ago. The "ghoulish habits" of Algol could explain this 0.017 days period increase (Battersby 2012).

SIS - Species and Stock Administrative Data Set

Data.gov (United States)

National Oceanic and Atmospheric Administration, Department of Commerce — The Species and Stock Administrative data set within the Species Information System (SIS) defines entities within the database that serve as the basis for recording...

78 FR 38672 - Ocean Dumping; Sabine-Neches Waterway (SNWW) Ocean Dredged Material Disposal Site Designation

Science.gov (United States)

2013-06-27

... potential aquatic and non-aquatic (i.e., land-based) alternatives and the consequences of not designating a... uses of the ocean, that they would not be human pathogens, and would not be non-indigenous species. The... Department of Natural Resources (LDNR) and the Texas General Land Office (TGLO), the agencies implementing...

Predicting interactions among fishing, ocean warming, and ocean acidification in a marine system with whole-ecosystem models.

Science.gov (United States)

Griffith, Gary P; Fulton, Elizabeth A; Gorton, Rebecca; Richardson, Anthony J

2012-12-01

An important challenge for conservation is a quantitative understanding of how multiple human stressors will interact to mitigate or exacerbate global environmental change at a community or ecosystem level. We explored the interaction effects of fishing, ocean warming, and ocean acidification over time on 60 functional groups of species in the southeastern Australian marine ecosystem. We tracked changes in relative biomass within a coupled dynamic whole-ecosystem modeling framework that included the biophysical system, human effects, socioeconomics, and management evaluation. We estimated the individual, additive, and interactive effects on the ecosystem and for five community groups (top predators, fishes, benthic invertebrates, plankton, and primary producers). We calculated the size and direction of interaction effects with an additive null model and interpreted results as synergistic (amplified stress), additive (no additional stress), or antagonistic (reduced stress). Individually, only ocean acidification had a negative effect on total biomass. Fishing and ocean warming and ocean warming with ocean acidification had an additive effect on biomass. Adding fishing to ocean warming and ocean acidification significantly changed the direction and magnitude of the interaction effect to a synergistic response on biomass. The interaction effect depended on the response level examined (ecosystem vs. community). For communities, the size, direction, and type of interaction effect varied depending on the combination of stressors. Top predator and fish biomass had a synergistic response to the interaction of all three stressors, whereas biomass of benthic invertebrates responded antagonistically. With our approach, we were able to identify the regional effects of fishing on the size and direction of the interacting effects of ocean warming and ocean acidification. ©2012 Society for Conservation Biology.

Serendipitous discovery of Wolbachia genomes in multiple Drosophila species.

Science.gov (United States)

Salzberg, Steven L; Dunning Hotopp, Julie C; Delcher, Arthur L; Pop, Mihai; Smith, Douglas R; Eisen, Michael B; Nelson, William C

2005-01-01

The Trace Archive is a repository for the raw, unanalyzed data generated by large-scale genome sequencing projects. The existence of this data offers scientists the possibility of discovering additional genomic sequences beyond those originally sequenced. In particular, if the source DNA for a sequencing project came from a species that was colonized by another organism, then the project may yield substantial amounts of genomic DNA, including near-complete genomes, from the symbiotic or parasitic organism. By searching the publicly available repository of DNA sequencing trace data, we discovered three new species of the bacterial endosymbiont Wolbachia pipientis in three different species of fruit fly: Drosophila ananassae, D. simulans, and D. mojavensis. We extracted all sequences with partial matches to a previously sequenced Wolbachia strain and assembled those sequences using customized software. For one of the three new species, the data recovered were sufficient to produce an assembly that covers more than 95% of the genome; for a second species the data produce the equivalent of a 'light shotgun' sampling of the genome, covering an estimated 75-80% of the genome; and for the third species the data cover approximately 6-7% of the genome. The results of this study reveal an unexpected benefit of depositing raw data in a central genome sequence repository: new species can be discovered within this data. The differences between these three new Wolbachia genomes and the previously sequenced strain revealed numerous rearrangements and insertions within each lineage and hundreds of novel genes. The three new genomes, with annotation, have been deposited in GenBank.

How will ocean acidification affect Baltic sea ecosystems? an assessment of plausible impacts on key functional groups.

Science.gov (United States)

Havenhand, Jonathan N

2012-09-01

Increasing partial pressure of atmospheric CO₂ is causing ocean pH to fall-a process known as 'ocean acidification'. Scenario modeling suggests that ocean acidification in the Baltic Sea may cause a ≤ 3 times increase in acidity (reduction of 0.2-0.4 pH units) by the year 2100. The responses of most Baltic Sea organisms to ocean acidification are poorly understood. Available data suggest that most species and ecologically important groups in the Baltic Sea food web (phytoplankton, zooplankton, macrozoobenthos, cod and sprat) will be robust to the expected changes in pH. These conclusions come from (mostly) single-species and single-factor studies. Determining the emergent effects of ocean acidification on the ecosystem from such studies is problematic, yet very few studies have used multiple stressors and/or multiple trophic levels. There is an urgent need for more data from Baltic Sea populations, particularly from environmentally diverse regions and from controlled mesocosm experiments. In the absence of such information it is difficult to envision the likely effects of future ocean acidification on Baltic Sea species and ecosystems.

New Species of Orchids from Vietnam

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Leonid V. Averyanov

2007-12-01

Full Text Available Identification of herbarium specimens collected in course of field exploration works in Vietnam during 2005-2007 revealed ten species of orchids new for science. Illustrated descriptions are provided for each discovered species, which are named as Anoectochilus papillosus, Arundina caespitosa, Bulbophyllum paraemarginatum, B. sinhoënse, Cheirostylis foliosa, Goodyera rhombodoides, Liparis rivularis, Oberonia multidentata, O. trichophora and Sunipia nigricans.

Foraging behavior and success of a mesopelagic predator in the northeast Pacific Ocean: insights from a data-rich species, the northern elephant seal.

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Patrick W Robinson

Full Text Available The mesopelagic zone of the northeast Pacific Ocean is an important foraging habitat for many predators, yet few studies have addressed the factors driving basin-scale predator distributions or inter-annual variability in foraging and breeding success. Understanding these processes is critical to reveal how conditions at sea cascade to population-level effects. To begin addressing these challenging questions, we collected diving, tracking, foraging success, and natality data for 297 adult female northern elephant seal migrations from 2004 to 2010. During the longer post-molting migration, individual energy gain rates were significant predictors of pregnancy. At sea, seals focused their foraging effort along a narrow band corresponding to the boundary between the sub-arctic and sub-tropical gyres. In contrast to shallow-diving predators, elephant seals target the gyre-gyre boundary throughout the year rather than follow the southward winter migration of surface features, such as the Transition Zone Chlorophyll Front. We also assessed the impact of added transit costs by studying seals at a colony near the southern extent of the species' range, 1,150 km to the south. A much larger proportion of seals foraged locally, implying plasticity in foraging strategies and possibly prey type. While these findings are derived from a single species, the results may provide insight to the foraging patterns of many other meso-pelagic predators in the northeast Pacific Ocean.

Dianthus aticii, a new species from Turkey (Caryophyllaceae

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Ergin Hamzaoğlu

2015-04-01

Full Text Available During the taxonomic revision of the Turkish Dianthus species, specimens collected from Bilecik, Seben (Bolu, and Nallıhan (Ankara were discovered that represent a new species. Its description, images, chorology, ecology, and threat category are provided. It was compared with a closely related species, D. zonatus, and differences are based on its general morphology and seed micromorphology.

Dianthus aticii, a new species from Turkey (Caryophyllaceae)

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Hamzaoğlu, Ergin; Koç, Murat; Aksoy, Ahmet

2015-01-01

Abstract During the taxonomic revision of the Turkish Dianthus species, specimens collected from Bilecik, Seben (Bolu), and Nallıhan (Ankara) were discovered that represent a new species. Its description, images, chorology, ecology, and threat category are provided. It was compared with a closely related species, Dianthus zonatus, and differences are based on its general morphology and seed micromorphology. PMID:25931971

Bythaelurus bachi n. sp., a new deep-water catshark (Carcharhiniformes, Scyliorhinidae) from the southwestern Indian Ocean, with a review of Bythaelurus species and a key to their identification.

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Weigmann, Simon; Ebert, David A; Clerkin, Paul J; Stehmann, Matthias F W; Naylor, Gavin J P

2016-12-19

A new deep-water catshark, Bythaelurus bachi, is described based on 44 specimens caught on the southern Madagascar Ridge in the southwestern Indian Ocean. The new species is the only stout-bodied Bythaelurus with oral papillae in the region and is distinguished from all congeners by the plain beige to light gray-brown coloration, high diversity in dermal denticle morphology, and presence of composite oral papillae. Despite resemblance in body shape, Bythaelurus bachi n. sp. is distinguished from its closest congener, B. naylori Ebert & Clerkin, 2015, by the presence of numerous large, partially composite papillae on the tongue and roof of the mouth (vs. papillae lacking), plain light coloration (vs. medium to dark brown ground color, light fin edges and a distinctly dark dusky-colored snout), only slightly enlarged dermal denticles on the anterior upper caudal-fin margin (vs. dermal denticles distinctly enlarged), a higher diversity in dermal denticle morphology in general, and smaller maximum size and size at maturity. The distinction of both species is also supported by molecular results. The new species differs from all other congeners in the western Indian Ocean in the stout body shape of large specimens, coloration, larger size, as well as several morphometrics, including larger claspers, longer eyes and dorsal fins, and shorter pelvic-anal and pelvic-caudal spaces. The genus is reviewed, a key to its species given.

Discovering the Solar System

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Jones, Barrie W.

1999-04-01

Discovering the Solar System Barrie W. Jones The Open University, Milton Keynes, UK Discovering the Solar System is a comprehensive, up-to-date account of the Solar System and of the ways in which the various bodies have been investigated and modelled. The approach is thematic, with sequences of chapters on the interiors of planetary bodies, on their surfaces, and on their atmospheres. Within each sequence there is a chapter on general principles and processes followed by one or two chapters on specific bodies. There is also an introductory chapter, a chapter on the origin of the Solar System, and a chapter on asteroids, comets and meteorites. Liberally illustrated with diagrams, black and white photographs and colour plates, Discovering the Solar System also features: * tables of essential data * question and answers within the text * end of section review questions with answers and comments Discovering the Solar System is essential reading for all undergraduate students for whom astronomy or planetary science are components of their degrees, and for those at a more advanced level approaching the subject for the first time. It will also be of great interest to non-specialists with a keen interest in astronomy. A small amount of scientific knowledge is assumed plus familiarity with basic algebra and graphs. There is no calculus. Praise for this book includes: ".certainly qualifies as an authoritative text. The author clearly has an encyclopedic knowledge of the subject." Meteorics and Planetary Science ".liberally doused with relevant graphs, tables, and black and white figures of good quality." EOS, Transactions of the American Geophysical Union ".one of the best books on the Solar System I have seen. The general accuracy and quality of the content is excellent." Journal of the British Astronomical Association

Polychaeta Orbiniidae from Antarctica, the Southern Ocean, the Abyssal Pacific Ocean, and off South America.

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Blake, James A

2017-01-12

The orbiniid polychaetes chiefly from Antarctic and subantarctic seas and off South America are described based on collections of the National Museum of Natural History and new material from surveys conducted by the United States Antarctic Program and other federal and privately funded sources as well as participation in international programs. A total of 44 species of Orbiniidae distributed in 10 genera are reported from the Pacific Ocean and waters off South America and Antarctica. Twenty-one species are new to science; one species is renamed. Berkeleyia heroae n. sp., B. abyssala n. sp., B. weddellia n. sp.; B. hadala n. sp., Leitoscoloplos simplex n. sp., L. plataensis n. sp., L. nasus n. sp., L. eltaninae n. sp., L. phyllobranchus n. sp., L. rankini n. sp., Scoloplos bathytatus n. sp., S. suroestense n. sp., Leodamas hyphalos n. sp., L. maciolekae n. sp., L. perissobranchiatus n. sp., Califia bilamellata n. sp., Orbinia orensanzi n. sp., Naineris antarctica n. sp., N. argentiniensis n. sp., Orbiniella spinosa n. sp., and O. landrumae n. sp. are new to science. A new name, Naineris furcillata, replaces N. chilensis Carrasco, 1977, a junior homonym of N. dendtritica chilensis Hartmann‑Schröder, 1965, which is raised to full species status. Leodamas cochleatus (Ehlers, 1900) is removed from synonymy and redescribed. A neotype is established for Leodamas verax Kinberg, 1966, the type species. A general overview of Leodamas species is provided. The Leitoscoloplos kerguelensis (McIntosh, 1885) complex is reviewed and partially revised. Definitions of the genera of the Orbiniidae are updated to conform to recently described taxa. Several new synonymies are proposed following a reexamination of previously described type specimens. The morphological characters used to identify and classify orbiniids are reviewed. The biogeographic and bathymetric distributions of the South American and Southern Ocean orbiniid fauna are reviewed.

Ocean acidification: the other CO2 problem.

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Doney, Scott C; Fabry, Victoria J; Feely, Richard A; Kleypas, Joan A

2009-01-01

Rising atmospheric carbon dioxide (CO2), primarily from human fossil fuel combustion, reduces ocean pH and causes wholesale shifts in seawater carbonate chemistry. The process of ocean acidification is well documented in field data, and the rate will accelerate over this century unless future CO2 emissions are curbed dramatically. Acidification alters seawater chemical speciation and biogeochemical cycles of many elements and compounds. One well-known effect is the lowering of calcium carbonate saturation states, which impacts shell-forming marine organisms from plankton to benthic molluscs, echinoderms, and corals. Many calcifying species exhibit reduced calcification and growth rates in laboratory experiments under high-CO2 conditions. Ocean acidification also causes an increase in carbon fixation rates in some photosynthetic organisms (both calcifying and noncalcifying). The potential for marine organisms to adapt to increasing CO2 and broader implications for ocean ecosystems are not well known; both are high priorities for future research. Although ocean pH has varied in the geological past, paleo-events may be only imperfect analogs to current conditions.

Phenotypic plasticity of southern ocean diatoms: key to success in the sea ice habitat?

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Olivia Sackett

Full Text Available Diatoms are the primary source of nutrition and energy for the Southern Ocean ecosystem. Microalgae, including diatoms, synthesise biological macromolecules such as lipids, proteins and carbohydrates for growth, reproduction and acclimation to prevailing environmental conditions. Here we show that three key species of Southern Ocean diatom (Fragilariopsis cylindrus, Chaetoceros simplex and Pseudo-nitzschia subcurvata exhibited phenotypic plasticity in response to salinity and temperature regimes experienced during the seasonal formation and decay of sea ice. The degree of phenotypic plasticity, in terms of changes in macromolecular composition, was highly species-specific and consistent with each species' known distribution and abundance throughout sea ice, meltwater and pelagic habitats, suggesting that phenotypic plasticity may have been selected for by the extreme variability of the polar marine environment. We argue that changes in diatom macromolecular composition and shifts in species dominance in response to a changing climate have the potential to alter nutrient and energy fluxes throughout the Southern Ocean ecosystem.

Ocean acidification alters temperature and salinity preferences in larval fish.

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Pistevos, Jennifer C A; Nagelkerken, Ivan; Rossi, Tullio; Connell, Sean D

2017-02-01

Ocean acidification alters the way in which animals perceive and respond to their world by affecting a variety of senses such as audition, olfaction, vision and pH sensing. Marine species rely on other senses as well, but we know little of how these might be affected by ocean acidification. We tested whether ocean acidification can alter the preference for physicochemical cues used for dispersal between ocean and estuarine environments. We experimentally assessed the behavioural response of a larval fish (Lates calcarifer) to elevated temperature and reduced salinity, including estuarine water of multiple cues for detecting settlement habitat. Larval fish raised under elevated CO 2 concentrations were attracted by warmer water, but temperature had no effect on fish raised in contemporary CO 2 concentrations. In contrast, contemporary larvae were deterred by lower salinity water, where CO 2 -treated fish showed no such response. Natural estuarine water-of higher temperature, lower salinity, and containing estuarine olfactory cues-was only preferred by fish treated under forecasted high CO 2 conditions. We show for the first time that attraction by larval fish towards physicochemical cues can be altered by ocean acidification. Such alterations to perception and evaluation of environmental cues during the critical process of dispersal can potentially have implications for ensuing recruitment and population replenishment. Our study not only shows that freshwater species that spend part of their life cycle in the ocean might also be affected by ocean acidification, but that behavioural responses towards key physicochemical cues can also be negated through elevated CO 2 from human emissions.

The role of temperature in determining species' vulnerability to ocean acidification: a case study using Mytilus galloprovincialis.

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Kristy J Kroeker

Full Text Available Ocean acidification (OA is occurring across a backdrop of concurrent environmental changes that may in turn influence species' responses to OA. Temperature affects many fundamental biological processes and governs key reactions in the seawater carbonate system. It therefore has the potential to offset or exacerbate the effects of OA. While initial studies have examined the combined impacts of warming and OA for a narrow range of climate change scenarios, our mechanistic understanding of the interactive effects of temperature and OA remains limited. Here, we use the blue mussel, Mytilus galloprovincialis, as a model species to test how OA affects the growth of a calcifying invertebrate across a wide range of temperatures encompassing their thermal optimum. Mussels were exposed in the laboratory to a factorial combination of low and high pCO2 (400 and 1200 µatm CO2 and temperatures (12, 14, 16, 18, 20, and 24°C for one month. Results indicate that the effects of OA on shell growth are highly dependent on temperature. Although high CO2 significantly reduced mussel growth at 14°C, this effect gradually lessened with successive warming to 20°C, illustrating how moderate warming can mediate the effects of OA through temperature's effects on both physiology and seawater geochemistry. Furthermore, the mussels grew thicker shells in warmer conditions independent of CO2 treatment. Together, these results highlight the importance of considering the physiological and geochemical interactions between temperature and carbonate chemistry when interpreting species' vulnerability to OA.

[Helminthic fauna of commercial fishes from the Saya-de-Malya bank (Indian Ocean)].

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Parukhin, A M

1988-01-01

The data on infestation of 8 species of commercial fishes from Saya-de-Malya bank (the Indian Ocean) are presented. 43 helminth species were identified: 10 Monogenea species, 18 trematode, 7 cestode and 8 nematode species. The mature worms are observed to be related to a certain host, whereas the nematode and cestode larvae have wide specificity. High infestation degree by Anisakis larvae is found in fishes, especially in Carangidae. At the bank area fishes are found to be free from Acanthocephala while those Acanthocephala are found in fishes from other areas of the Indian Ocean which may be attributed to the specific diet at the Saya-de-Malya bank. On the whole the helminth fauna of fishes examined at the Saya-de-Malya bank does not demonstrate the endemic pattern. The most specific helminth species were found in some fish species.

Individual and population-level responses to ocean acidification.

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Harvey, Ben P; McKeown, Niall J; Rastrick, Samuel P S; Bertolini, Camilla; Foggo, Andy; Graham, Helen; Hall-Spencer, Jason M; Milazzo, Marco; Shaw, Paul W; Small, Daniel P; Moore, Pippa J

2016-01-29

Ocean acidification is predicted to have detrimental effects on many marine organisms and ecological processes. Despite growing evidence for direct impacts on specific species, few studies have simultaneously considered the effects of ocean acidification on individuals (e.g. consequences for energy budgets and resource partitioning) and population level demographic processes. Here we show that ocean acidification increases energetic demands on gastropods resulting in altered energy allocation, i.e. reduced shell size but increased body mass. When scaled up to the population level, long-term exposure to ocean acidification altered population demography, with evidence of a reduction in the proportion of females in the population and genetic signatures of increased variance in reproductive success among individuals. Such increased variance enhances levels of short-term genetic drift which is predicted to inhibit adaptation. Our study indicates that even against a background of high gene flow, ocean acidification is driving individual- and population-level changes that will impact eco-evolutionary trajectories.

Temporal variability of dissolved iron species in the mesopelagic zone at Ocean Station PAPA

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Schallenberg, Christina; Ross, Andrew R. S.; Davidson, Ashley B.; Stewart, Gillian M.; Cullen, Jay T.

2017-08-01

Deposition of atmospheric aerosols to the surface ocean is considered an important mechanism for the supply of iron (Fe) to remote ocean regions, but direct observations of the oceanic response to aerosol deposition are sparse. In the high nutrient, low chlorophyll (HNLC) subarctic Pacific Ocean we observed a dissolved Fe and Fe(II) anomaly at depth that is best explained as the result of aerosol deposition from Siberian forest fires in May 2012. Interestingly, there was no evidence of enhanced dFe concentrations in surface waters, nor was there a detectable phytoplankton bloom in response to the suspected aerosol deposition. Dissolved Fe (dFe) and Fe(II) showed the strongest enhancement in the subsurface oxygen deficient zone (ODZ), where oxygen concentrations <50 μmol kg-1 are prevalent. In the upper 200 m, dFe concentrations were at or below historic background levels, consistent with a short residence time of aerosol particles in surface waters and possible scavenging loss of dFe. Aerosol toxicity and/or dominance of particle scavenging over dissolution of Fe in the upper water column may have contributed to the lack of a strong phytoplankton response.

Okamejei ornata n. sp., a new deep-water skate (Elasmobranchii, Rajidae) from the northwestern Indian Ocean off Socotra Islands

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Weigmann, Simon; Stehmann, Matthias F. W.; Thiel, Ralf

2015-05-01

A new species of the Indo-Pacific skate genus Okamejei is described based on 10 specimens caught around the Socotra Islands (northwestern Indian Ocean). The type series of Okamejei ornata n. sp. was sampled during cruise 17 of RV 'Vityaz' along the deep western Indian Ocean in 1988/89. The new species represents the fifth species of Okamejei in the western Indian Ocean and differs from its congeners in having a unique dorsal pattern of variable dark brown spots encircled with beige pigment and arranged into rosettes. The dorsal ground color is ocher, but the anterior snout is dusky. Compared to congeners in the western Indian Ocean, the new species has a shorter preorbital snout length, a greater orbit diameter, fewer pectoral radials, an intermediate distance between first gill slits, and an intermediate number of upper jaw tooth rows.

Freshwater paths across the ocean: molecular phylogeny of the frog Ptychadena newtoni gives insights into amphibian colonization of oceanic islands

OpenAIRE

Measey, John G.; Vences, M.; Drewes, R. C.; Chiari, Y.; Melo, M.; Bourlès, Bernard

2007-01-01

Aim Amphibians are a model group for studies of the biogeographical origins of salt-intolerant taxa on oceanic islands. We used the Gulf of Guinea islands to explore the biogeographical origins of island endemism of one species of frog, and used this to gain insights into potential colonization mechanisms. Location Sao Tome and Principe, two of the four major islands in the Gulf of Guinea, West Africa, are truly oceanic and have an exceptionally high biodiversity. Methods Mitochondrial DNA is...

Ocean acidification ameliorates harmful effects of warming in primary consumer.

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Pedersen, Sindre Andre; Hanssen, Anja Elise

2018-01-01

Climate change-induced warming and ocean acidification are considered two imminent threats to marine biodiversity and current ecosystem structures. Here, we have for the first time examined an animal's response to a complete life cycle of exposure to co-occurring warming (+3°C) and ocean acidification (+1,600 μatm CO 2 ), using the key subarctic planktonic copepod, Calanus finmarchicus , as a model species. The animals were generally negatively affected by warming, which significantly reduced the females' energy status and reproductive parameters (respectively, 95% and 69%-87% vs. control). Unexpectedly, simultaneous acidification partially offset the negative effect of warming in an antagonistic manner, significantly improving reproductive parameters and hatching success (233%-340% improvement vs. single warming exposure). The results provide proof of concept that ocean acidification may partially offset negative effects caused by warming in some species. Possible explanations and ecological implications for the observed antagonistic effect are discussed.

Scutellaria hsiehii (Lamiaceae, a New Species from Taiwan

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Tsung-Hsin Hsieh

2013-12-01

Full Text Available Two new species of Ophiopogon (O. rupestris, O. tristylatus and one species of Peliosanthes (P. cambodiana of Asparagaceae (Convallariaceae s. str. discovered recently in southern Cambodia and in Vietnam are described and illustrated. All described species are probably local endemics with a restricted distribution. Data reported for each described species comprise a standard citation of type specimens, description, list of available paratypes, proposed species epithet etymology, data on ecology, phenology and distribution, as well as short taxonomic remarks.

Coccolithophore growth and calcification in a changing ocean

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Krumhardt, Kristen M.; Lovenduski, Nicole S.; Iglesias-Rodriguez, M. Debora; Kleypas, Joan A.

2017-12-01

Coccolithophores are the most abundant calcifying phytoplankton in the ocean. These tiny primary producers have an important role in the global carbon cycle, substantially contributing to global ocean calcification, ballasting organic matter to the deep sea, forming part of the marine food web base, and influencing ocean-atmosphere CO2 exchange. Despite these important impacts, coccolithophores are not explicitly simulated in most marine ecosystem models and, therefore, their impacts on carbon cycling are not represented in most Earth system models. Here, we compile field and laboratory data to synthesize overarching, across-species relationships between environmental conditions and coccolithophore growth rates and relative calcification (reported as a ratio of particulate inorganic carbon to particulate organic carbon in coccolithophore biomass, PIC/POC). We apply our relationships in a generalized coccolithophore model, estimating current surface ocean coccolithophore growth rates and relative calcification, and projecting how these may change over the 21st century using output from the Community Earth System Model large ensemble. We find that average increases in sea surface temperature of ∼ 2-3 ° C lead to faster coccolithophore growth rates globally (> 10% increase) and increased calcification at high latitudes. Roughly an ubiquitous doubling of surface ocean pCO2 by the end of the century has the potential to moderately stimulate coccolithophore growth rates, but leads to reduced calcification (∼ 25% decrease). Decreasing nutrient availability (from warming-induced increases in stratification) produces increases in relative calcification, but leads to ∼ 25% slower growth rates. With all drivers combined, we observe decreases in calcification and growth in most low and mid latitude regions, with possible increases in both of these responses in most high latitude regions. Major limitations of our coccolithophore model stem from a lack of conclusive

Ocean Acidification | Smithsonian Ocean Portal

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Natural History Blog For Educators At The Museum Media Archive Ocean Life & Ecosystems Mammals Sharks Mangroves Poles Census of Marine Life Planet Ocean Tides & Currents Waves & Storms The Seafloor ocean is affected. Such a relatively quick change in ocean chemistry doesn't give marine life, which

Plasticity of trophic interactions among sharks from the oceanic south-western Indian Ocean revealed by stable isotope and mercury analyses

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Kiszka, Jeremy J.; Aubail, Aurore; Hussey, Nigel E.; Heithaus, Michael R.; Caurant, Florence; Bustamante, Paco

2015-02-01

Sharks are a major component of the top predator guild in oceanic ecosystems, but the trophic relationships of many populations remain poorly understood. We examined chemical tracers of diet and habitat (δ15N and δ13C, respectively) and total mercury (Hg) concentrations in muscle tissue of seven pelagic sharks: blue shark (Prionace glauca), short-fin mako shark (Isurus oxyrinchus), oceanic whitetip shark (Carcharhinus longimanus), scalloped hammerhead shark (Sphyrna lewini), pelagic thresher shark (Alopias pelagicus), crocodile shark (Pseudocarcharias kamoharai) and silky shark (Carcharhinus falciformis), from the data poor south-western tropical Indian Ocean. Minimal interspecific variation in mean δ15N values and a large degree of isotopic niche overlap - driven by high intraspecific variation in δ15N values - was observed among pelagic sharks. Similarly, δ13C values of sharks overlapped considerably for all species with the exception of P. glauca, which had more 13C-depleted values indicating possibly longer residence times in purely pelagic waters. Geographic variation in δ13C, δ15N and Hg were observed for P. glauca and I. oxyrinchus. Mean Hg levels were similar among species with the exception of P. kamoharai which had significantly higher Hg concentrations likely related to mesopelagic feeding. Hg concentrations increased with body size in I. oxyrinchus, P. glauca and C. longimanus. Values of δ15N and δ13C varied with size only in P. glauca, suggesting ontogenetic shifts in diets or habitats. Together, isotopic data indicate that - with few exceptions - variance within species in trophic interactions or foraging habitats is greater than differentiation among pelagic sharks in the south-western Indian Ocean. Therefore, it is possible that this group exhibits some level of trophic redundancy, but further studies of diets and fine-scale habitat use are needed to fully test this hypothesis.

Copper-containing plastocyanin used for electron transport by an oceanic diatom.

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Peers, Graham; Price, Neil M

2006-05-18

The supply of some essential metals to pelagic ecosystems is less than the demand, so many phytoplankton have slow rates of photosynthetic production and restricted growth. The types and amounts of metals required by phytoplankton depends on their evolutionary history and on their adaptations to metal availability, which varies widely among ocean habitats. Diatoms, for example, need considerably less iron (Fe) to grow than chlorophyll-b-containing taxa, and the oceanic species demand roughly one-tenth the amount of coastal strains. Like Fe, copper (Cu) is scarce in the open sea, but notably higher concentrations of it are required for the growth of oceanic than of coastal isolates. Here we report that the greater Cu requirement in an oceanic diatom, Thalassiosira oceanica, is entirely due to a single Cu-containing protein, plastocyanin, which--until now--was only known to exist in organisms with chlorophyll b and cyanobacteria. Algae containing chlorophyll c, including the closely related coastal species T. weissflogii, are thought to lack plastocyanin and contain a functionally equivalent Fe-containing homologue, cytochrome c6 (ref. 9). Copper deficiency in T. oceanica inhibits electron transport regardless of Fe status, implying a constitutive role for plastocyanin in the light reactions of photosynthesis in this species. The results suggest that selection pressure imposed by Fe limitation has resulted in the use of a Cu protein for photosynthesis in an oceanic diatom. This biochemical switch reduces the need for Fe and increases the requirement for Cu, which is relatively more abundant in the open sea.

Red coral extinction risk enhanced by ocean acidification.

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Cerrano, Carlo; Cardini, Ulisse; Bianchelli, Silvia; Corinaldesi, Cinzia; Pusceddu, Antonio; Danovaro, Roberto

2013-01-01

The red coral Corallium rubrum is a habitat-forming species with a prominent and structural role in mesophotic habitats, which sustains biodiversity hotspots. This precious coral is threatened by both over-exploitation and temperature driven mass mortality events. We report here that biocalcification, growth rates and polyps' (feeding) activity of Corallium rubrum are significantly reduced at pCO2 scenarios predicted for the end of this century (0.2 pH decrease). Since C. rubrum is a long-living species (>200 years), our results suggest that ocean acidification predicted for 2100 will significantly increases the risk of extinction of present populations. Given the functional role of these corals in the mesophotic zone, we predict that ocean acidification might have cascading effects on the functioning of these habitats worldwide.

The genus Litophyton Forskål, 1775 (Octocorallia, Alcyonacea, Nephtheidae) in the Red Sea and the western Indian Ocean

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van Ofwegen, Leen P.

2016-01-01

Abstract The Litophyton species of the Red Sea and the western Indian Ocean are revised, which includes species previously belonging to the genus Nephthea, which is synonymized with Litophyton. A neotype for both Litophyton arboreum, the type species of Litophyton, and Nephthea chabrolii, the type species of Nephthea, are designated. The new species Litophyton curvum sp. n. is described and depicted, and a key to all Litophyton species is provided. Of the 26 species previously described from the western Indian Ocean and Red Sea, 13 species are considered valid and 13 have been synonymized or placed in other genera. PMID:27103869

Hydrogen isotopic fractionation during crystallization of the terrestrial magma ocean

Science.gov (United States)

Pahlevan, K.; Karato, S. I.

2016-12-01

Models of the Moon-forming giant impact extensively melt and partially vaporize the silicate Earth and deliver a substantial mass of metal to the Earth's core. The subsequent evolution of the terrestrial magma ocean and overlying vapor atmosphere over the ensuing 105-6 years has been largely constrained by theoretical models with remnant signatures from this epoch proving somewhat elusive. We have calculated equilibrium hydrogen isotopic fractionation between the magma ocean and overlying steam atmosphere to determine the extent to which H isotopes trace the evolution during this epoch. By analogy with the modern silicate Earth, the magma ocean-steam atmosphere system is often assumed to be chemically oxidized (log fO2 QFM) with the dominant atmospheric vapor species taken to be water vapor. However, the terrestrial magma ocean - having held metallic droplets in suspension - may also exhibit a much more reducing character (log fO2 IW) such that equilibration with the overlying atmosphere renders molecular hydrogen the dominant H-bearing vapor species. This variable - the redox state of the magma ocean - has not been explicitly included in prior models of the coupled evolution of the magma ocean-steam atmosphere system. We find that the redox state of the magma ocean influences not only the vapor speciation and liquid-vapor partitioning of hydrogen but also the equilibrium isotopic fractionation during the crystallization epoch. The liquid-vapor isotopic fractionation of H is substantial under reducing conditions and can generate measurable D/H signatures in the crystallization products but is largely muted in an oxidizing magma ocean and steam atmosphere. We couple equilibrium isotopic fractionation with magma ocean crystallization calculations to forward model the behavior of hydrogen isotopes during this epoch and find that the distribution of H isotopes in the silicate Earth immediately following crystallization represents an oxybarometer for the terrestrial

Interactive influences of bioactive trace metals on biological production in oceanic waters

International Nuclear Information System (INIS)

Bruland, K.W.; Donat, J.R.; Hutchins, D.A.

1991-01-01

The authors present an overview of the oceanic chemistries of the bioactive trace metals, Mn, Fe, Co, Ni, Cu, and Zn; the authors combine field data with results from laboratory phytoplankton culture-trace metal studies and speculate on the potential influences of these trace metals on oceanic plankton production and species composition. Most field studies have focused on the effects of single metals. However, they propose that synergistic and antagonistic interactions between multiple trace metals could be very important in the oceans. Trace metal antagonisms that may prove particularly important are those between Cu and the potential biolimiting metals Fe, Mn, and Zn. These antagonistic interactions could have the greatest influence on biological productivity in areas of the open ocean isolated from terrestrial inputs, such as the remote high nutrient regions of the Pacific and Antarctic Oceans. The emerging picture of trace metal-biota interactions in these oceanic areas is one in which biology strongly influences distribution and chemical speciation of all these bioactive trace metals. It also seems likely that many of these bioactive trace metals and their speciation may influence levels of primary productivity, species composition, and trophic structure. Future investigations should give more complete consideration to the interactive effects of biologically important trace metals

Zooplankton species identities and other data from the KNORR and other platforms as part of the International Decade of Ocean Exploration (IDOE) from 01 September 1969 to 01 December 1971 (NODC Accession 7300577)

Data.gov (United States)

National Oceanic and Atmospheric Administration, Department of Commerce — Zooplankton species identities and other data were collected from the KNORR and other platforms the from 01 September 1969 to 01 December 1971. Data were collected...

Description of a newly discovered Triatoma infestans (Hemiptera: Reduviidae Foci in Ibipeba, State of Bahia, Brazil

Directory of Open Access Journals (Sweden)

Renato Freitas Araújo

2014-07-01

Full Text Available Introduction Chagas disease transmitted by the Triatoma infestans was eradicated from Brazil in 2006. However, reports of triatomine foci threaten the control of Chagas disease. The goal of this study was to determine T. infestans foci in the City of Ibipeba, State of Bahia. Methods Triatominae specimens were collected in Ibipeba and entomologic indicators were calculated using indices of domiciliary infestation, density, and colonization. Results T. infestans foci was discovery in Ibipeba, State of Bahia. Approximately 95% of the specimens were discovered inside dwellings, of which 34% were T. infestans. This species was also discovered forming a colony in tree bark in the peridomicile. Conclusions Triatoma infestans foci in peridomestic ecotopes in Ibipeba, BA, indicate increased the risk of transmission Chagas disease.

Species identification and other data collected from visual observation and other data from the COMMONWEALTH and other platforms in the North Pacific Ocean from 01 October 1950 to 01 August 1963 (NODC Accession 7200709)

Data.gov (United States)

National Oceanic and Atmospheric Administration, Department of Commerce — Species identification and other data were collected using visual observation, net, and photograph from the COMMONWEALTH and other platforms in the North Pacific...

The Arctic Ocean marine carbon cycle: evaluation of air-sea CO2 exchanges, ocean acidification impacts and potential feedbacks

Directory of Open Access Journals (Sweden)

N. R. Bates

2009-11-01

Full Text Available At present, although seasonal sea-ice cover mitigates atmosphere-ocean gas exchange, the Arctic Ocean takes up carbon dioxide (CO2 on the order of −66 to −199 Tg C year−1 (1012 g C, contributing 5–14% to the global balance of CO2 sinks and sources. Because of this, the Arctic Ocean has an important influence on the global carbon cycle, with the marine carbon cycle and atmosphere-ocean CO2 exchanges sensitive to Arctic Ocean and global climate change feedbacks. In the near-term, further sea-ice loss and increases in phytoplankton growth rates are expected to increase the uptake of CO2 by Arctic Ocean surface waters, although mitigated somewhat by surface warming in the Arctic. Thus, the capacity of the Arctic Ocean to uptake CO2 is expected to alter in response to environmental changes driven largely by climate. These changes are likely to continue to modify the physics, biogeochemistry, and ecology of the Arctic Ocean in ways that are not yet fully understood. In surface waters, sea-ice melt, river runoff, cooling and uptake of CO2 through air-sea gas exchange combine to decrease the calcium carbonate (CaCO3 mineral saturation states (Ω of seawater while seasonal phytoplankton primary production (PP mitigates this effect. Biological amplification of ocean acidification effects in subsurface waters, due to the remineralization of organic matter, is likely to reduce the ability of many species to produce CaCO3 shells or tests with profound implications for Arctic marine ecosystems

Thick-shelled, grazer-protected diatoms decouple ocean carbon and silicon cycles in the iron-limited Antarctic Circumpolar Current

Science.gov (United States)

Assmy, Philipp; Smetacek, Victor; Montresor, Marina; Klaas, Christine; Henjes, Joachim; Strass, Volker H.; Arrieta, Jesús M.; Bathmann, Ulrich; Berg, Gry M.; Breitbarth, Eike; Cisewski, Boris; Friedrichs, Lars; Fuchs, Nike; Herndl, Gerhard J.; Jansen, Sandra; Krägefsky, Sören; Latasa, Mikel; Peeken, Ilka; Röttgers, Rüdiger; Scharek, Renate; Schüller, Susanne E.; Steigenberger, Sebastian; Webb, Adrian; Wolf-Gladrow, Dieter

2013-01-01

Diatoms of the iron-replete continental margins and North Atlantic are key exporters of organic carbon. In contrast, diatoms of the iron-limited Antarctic Circumpolar Current sequester silicon, but comparatively little carbon, in the underlying deep ocean and sediments. Because the Southern Ocean is the major hub of oceanic nutrient distribution, selective silicon sequestration there limits diatom blooms elsewhere and consequently the biotic carbon sequestration potential of the entire ocean. We investigated this paradox in an in situ iron fertilization experiment by comparing accumulation and sinking of diatom populations inside and outside the iron-fertilized patch over 5 wk. A bloom comprising various thin- and thick-shelled diatom species developed inside the patch despite the presence of large grazer populations. After the third week, most of the thinner-shelled diatom species underwent mass mortality, formed large, mucous aggregates, and sank out en masse (carbon sinkers). In contrast, thicker-shelled species, in particular Fragilariopsis kerguelensis, persisted in the surface layers, sank mainly empty shells continuously, and reduced silicate concentrations to similar levels both inside and outside the patch (silica sinkers). These patterns imply that thick-shelled, hence grazer-protected, diatom species evolved in response to heavy copepod grazing pressure in the presence of an abundant silicate supply. The ecology of these silica-sinking species decouples silicon and carbon cycles in the iron-limited Southern Ocean, whereas carbon-sinking species, when stimulated by iron fertilization, export more carbon per silicon. Our results suggest that large-scale iron fertilization of the silicate-rich Southern Ocean will not change silicon sequestration but will add carbon to the sinking silica flux. PMID:24248337

Climate change and the oceans--what does the future hold?

Science.gov (United States)

Bijma, Jelle; Pörtner, Hans-O; Yesson, Chris; Rogers, Alex D

2013-09-30

The ocean has been shielding the earth from the worst effects of rapid climate change by absorbing excess carbon dioxide from the atmosphere. This absorption of CO2 is driving the ocean along the pH gradient towards more acidic conditions. At the same time ocean warming is having pronounced impacts on the composition, structure and functions of marine ecosystems. Warming, freshening (in some areas) and associated stratification are driving a trend in ocean deoxygenation, which is being enhanced in parts of the coastal zone by upwelling of hypoxic deep water. The combined impact of warming, acidification and deoxygenation are already having a dramatic effect on the flora and fauna of the oceans with significant changes in distribution of populations, and decline of sensitive species. In many cases, the impacts of warming, acidification and deoxygenation are increased by the effects of other human impacts, such as pollution, eutrophication and overfishing. The interactive effects of this deadly trio mirrors similar events in the Earth's past, which were often coupled with extinctions of major species' groups. Here we review the observed impacts and, using past episodes in the Earth's history, set out what the future may hold if carbon emissions and climate change are not significantly reduced with more or less immediate effect. Copyright © 2013. Published by Elsevier Ltd.

Zooplankton species identities and other data from the KNORR and other platforms as part of the International Decade of Ocean Exploration (IDOE) from 01 June 1969 to 01 December 1971 (NCEI Accession 7200735)

Data.gov (United States)

National Oceanic and Atmospheric Administration, Department of Commerce — Zooplankton species identities and other data were collected from the KNORR and other platforms from 01 June 1969 to 01 December 1971. Data were collected by the...

Warm mid-Cretaceous high-latitude sea-surface temperatures from the southern Tethys Ocean and cool high-latitude sea-surface temperatures from the Arctic Ocean: asymmetric worldwide distribution of dinoflagellates

Science.gov (United States)

Masure, Edwige; Desmares, Delphine; Vrielynck, Bruno

2014-05-01

Dealing with 87 articles and using a Geographical Information System, Masure and Vrielynck (2009) have mapped worldwide biogeography of 38 Late Albian dinoflagellate cysts and have demonstrated Cretaceous oceanic bioclimatic belts. For comparison 30 Aptian species derived from 49 studies (Masure et al., 2013) and 49 Cenomanian species recorded from 33 articles have been encountered. Tropical, Subtropical, Boreal, Austral, bipolar and cosmopolitan species have been identified and Cretaceous dinoflagellate biomes are introduced. Asymmetric distribution of Aptian and Late Albian/Cenomanian subtropical Tethyan species, from 40°N to 70°S, demonstrates asymmetric Aptian and Late Albian/Cenomanian Sea Surface Temperature (SST) gradients with warm water masses in high latitudes of Southern Ocean. The SST gradients were stronger in the Northern Hemisphere than in the Southern Hemisphere. We note that Aptian and Late Albian/Cenomanian dinoflagellates restricted to subtropical and subpolar latitudes met and mixed at 35-40°N, while they mixed from 30°S to 70°S and from 50°S to 70°S respectively in the Southern Hemisphere. Mixing belts extend on 5° in the Northern Hemisphere and along 40° (Aptian) and 20° (Late Albian/Cenomanian) in the Southern one. The board southern mixing belt of Tethyan and Austral dinoflagellates suggest co-occurrence of warm and cold currents. We record climatic changes such as the Early Aptian cooler period and Late Aptian and Albian warming through the poleward migration of species constrained to cool water masses. These species sensitive to temperature migrated from 35°N to 55°N through the shallow Greenland-Norwergian Seaway connecting the Central Atlantic and the Arctic Ocean. While Tethyan species did not migrate staying at 40°N. We suggest that the Greenland-Norwergian Seaway might has been a barrier until Late Albian/Cenomanian for oceanic Tethyan dinoflagellates stopped either by the shallow water column or temperature and salinity

After continents divide: Comparative phylogeography of reef fishes from the Red Sea and Indian Ocean

KAUST Repository

Dibattista, Joseph D.; Berumen, Michael L.; Gaither, Michelle R.; Rocha, Luiz A.; Eble, Jeff A.; Choat, John Howard; Craig, Matthew T.; Skillings, Derek J.; Bowen, Brian W.

2013-01-01

Aim: The Red Sea is a biodiversity hotspot characterized by a unique marine fauna and high endemism. This sea began forming c. 24 million years ago with the separation of the African and Arabian plates, and has been characterized by periods of desiccation, hypersalinity and intermittent connection to the Indian Ocean. We aim to evaluate the impact of these events on the genetic architecture of the Red Sea reef fish fauna. Location: Red Sea and Western Indian Ocean. Methods: We surveyed seven reef fish species from the Red Sea and adjacent Indian Ocean using mitochondrial DNA cytochrome c oxidase subunit I and cytochrome b sequences. To assess genetic variation and evolutionary connectivity within and between these regions, we estimated haplotype diversity (h) and nucleotide diversity (π), reconstructed phylogenetic relationships among haplotypes, and estimated gene flow and time of population separation using Bayesian coalescent-based methodology. Results: Our analyses revealed a range of scenarios from shallow population structure to diagnostic differences that indicate evolutionary partitions and possible cryptic species. Conventional molecular clocks and coalescence analyses indicated time-frames for divergence between these bodies of water ranging from 830,000 years to contemporary exchange or recent range expansion. Colonization routes were bidirectional, with some species moving from the Indian Ocean to the Red Sea compared with expansion out of the Red Sea for other species. Main conclusions: We conclude that: (1) at least some Red Sea reef fauna survived multiple salinity crises; (2) endemism is higher in the Red Sea than previously reported; and (3) the Red Sea is an evolutionary incubator, occasionally contributing species to the adjacent Indian Ocean. The latter two conclusions - elevated endemism and species export - indicate a need for enhanced conservation priorities for the Red Sea. © 2013 Blackwell Publishing Ltd.

After continents divide: Comparative phylogeography of reef fishes from the Red Sea and Indian Ocean

KAUST Repository

Dibattista, Joseph D.

2013-01-07

Aim: The Red Sea is a biodiversity hotspot characterized by a unique marine fauna and high endemism. This sea began forming c. 24 million years ago with the separation of the African and Arabian plates, and has been characterized by periods of desiccation, hypersalinity and intermittent connection to the Indian Ocean. We aim to evaluate the impact of these events on the genetic architecture of the Red Sea reef fish fauna. Location: Red Sea and Western Indian Ocean. Methods: We surveyed seven reef fish species from the Red Sea and adjacent Indian Ocean using mitochondrial DNA cytochrome c oxidase subunit I and cytochrome b sequences. To assess genetic variation and evolutionary connectivity within and between these regions, we estimated haplotype diversity (h) and nucleotide diversity (π), reconstructed phylogenetic relationships among haplotypes, and estimated gene flow and time of population separation using Bayesian coalescent-based methodology. Results: Our analyses revealed a range of scenarios from shallow population structure to diagnostic differences that indicate evolutionary partitions and possible cryptic species. Conventional molecular clocks and coalescence analyses indicated time-frames for divergence between these bodies of water ranging from 830,000 years to contemporary exchange or recent range expansion. Colonization routes were bidirectional, with some species moving from the Indian Ocean to the Red Sea compared with expansion out of the Red Sea for other species. Main conclusions: We conclude that: (1) at least some Red Sea reef fauna survived multiple salinity crises; (2) endemism is higher in the Red Sea than previously reported; and (3) the Red Sea is an evolutionary incubator, occasionally contributing species to the adjacent Indian Ocean. The latter two conclusions - elevated endemism and species export - indicate a need for enhanced conservation priorities for the Red Sea. © 2013 Blackwell Publishing Ltd.

Assessment of cadmium, copper and lead in marine species of the atlantic and pacific oceans of Guatemala by voltametry techniques

International Nuclear Information System (INIS)

Chun, Evelyn

2000-01-01

In this thesis results of measurements of cooper, lead, and cadmium were made using voltametry. Three points in the pacific ocean and one in the atlantic were selected to obtain samples of fish and shrimp as species that are contaminated with toxic metals. The samples were treated by physical and chemical methods to turn soluble the metals and the chemical determination could be done using voltametry or differential polarography of pulse. The results shown that copper, lead and cadmium are present in the samples in traces level. The precision of measurements was verified measuring certified by the National Institute of Standard and Technology NIST of the Commerce Departmento of the United States

Diversity and abundance of pteropods and heteropods along a latitudinal gradient across the Atlantic Ocean

Science.gov (United States)

Burridge, Alice K.; Goetze, Erica; Wall-Palmer, Deborah; Le Double, Serena L.; Huisman, Jef; Peijnenburg, Katja T. C. A.

2017-11-01

Shelled pteropods and heteropods are two independent groups of holoplanktonic gastropods that are potentially good indicators of the effects of ocean acidification. Although insight into their ecology and biogeography is important for predicting species-specific sensitivities to ocean change, the species abundances and biogeographical distributions of pteropods and heteropods are still poorly known. Here, we examined abundance and distribution patterns of pteropods (euthecosomes, pseudothecosomes, gymnosomes) and heteropods at 31 stations along a transect from 46°N to 46°S across the open waters of the Atlantic Ocean (Atlantic Meridional Transect cruise AMT24). We collected a total of 7312 pteropod specimens belonging to at least 31 species. Pteropod abundances were low north of 40°N with 4000 ind./1000 m3 just south of 40°S. This accounted for an estimated biomass of 3.2 mg m-3 south of 40°S and an average of 0.49 mg m-3 along the entire transect. Species richness of pteropods was highest in the stratified (sub)tropical waters between 30°N and 30°S, with a maximum of 15 species per station. The biogeographical distribution of pteropod assemblages inferred by cluster analysis was largely congruent with the distribution of Longhurst's biogeochemical provinces. Some pteropod species distributions were limited to particular oceanographic provinces, for example, subtropical gyres (e.g. Styliola subula) or warm equatorial waters (e.g. Creseis virgula). Other species showed much broader distributions between ∼35°N and ∼35°S (e.g. Limacina bulimoides and Heliconoides inflatus). We collected 1812 heteropod specimens belonging to 18 species. Highest heteropod abundances and species richness were found between 30°N and 20°S, with up to ∼700 ind./1000 m3 and a maximum of 14 species per station. Heteropods were not restricted to tropical and subtropical waters, however, as some taxa were also relatively abundant in subantarctic waters. Given the variation in

Discovering workflow nets using integer linear programming

NARCIS (Netherlands)

van Zelst, S.J.; van Dongen, B.F.; van der Aalst, W.M.P.; Verbeek, H.M.W.

Process mining is concerned with the analysis, understanding and improvement of business processes. Process discovery, i.e. discovering a process model based on an event log, is considered the most challenging process mining task. State-of-the-art process discovery algorithms only discover local

Underappreciated species in ecology: "ugly fish" in the northwest Atlantic Ocean.

Science.gov (United States)

Link, Jason S

2007-10-01

Species shifts and replacements are common in ecological studies. Observations thereof serve as the impetus for many ecological endeavors. Many of the species now known to dominate ecosystem functioning were largely ignored until studies of those underappreciated species elucidated their critical roles. Recognizing the potential importance of underappreciated species has implications for functional redundancies in ecosystems and should alter our approach to long-term monitoring. One example of an applied ecological system containing species shifts, underappreciated species, and potential changes in functional redundancies is the topic of fisheries. The demersal component of many fish communities usually consists of high-profile and commercially valuable species that are targets of fisheries, plus a diverse group of lesser known species that have minimal commercial value and focus. Yet ecologically these traditionally nontargeted species are often a major biomass sink in marine ecosystems and can also be critical in the functioning of bentho-demersal food webs. I examined the biomass trajectories of several species of skates, cottids, lophiids, anarhichadids, zooarcids, and similar species in the northeast U.S. Atlantic ecosystem to determine whether their relative abundance has changed across the past four decades. Distribution and stomach contents of these species were also evaluated over time to further elucidate the relative importance of these species. Landings of these underappreciated bentho-demersal fish were also examined in comparison to those species that historically have been commercially targeted. Of particular emphasis was the evaluation of evidence for sequential stock depletion and the ramifications for functional redundancy for this ecosystem. Results indicate that some of these fish species are now the dominant piscivores, benthivores, and scavengers in this ecosystem. These formerly under-studied species generally have either maintained a

Phase Two Protected Species Valuation

Data.gov (United States)

National Oceanic and Atmospheric Administration, Department of Commerce — Nonmarket valuation research has produced economic value estimates for a variety of threatened, endangered, and rare species around the world. Although over 40 value...

Phase One Protected Species Valuation

Data.gov (United States)

National Oceanic and Atmospheric Administration, Department of Commerce — Nonmarket valuation research has produced economic value estimates for a variety of threatened, endangered, and rare species around the world. Although over 40 value...

Five decades of N2 fixation research in the North Atlantic Ocean

Directory of Open Access Journals (Sweden)

Mar eBenavides

2015-06-01

Full Text Available Dinitrogen (N2 fixation (the reduction of atmospheric N2 to ammonium by specialized prokaryotic microbes, represents an important input of fixed nitrogen and contributes significantly to primary productivity in the oceans. Marine N2 fixation was discovered in the North Atlantic Ocean (NA in the 1960s. Ever since, the NA has been subject to numerous studies that have looked into the diversity and abundance of N2-fixing microbes (diazotrophs, the spatial and temporal variability of N2 fixation rates, and the range of physical and chemical variables that control them. The NA provides 10-25% of the globally fixed N2, ranking as the third basin with the largest N2 fixation inputs in the world’s oceans. This basin suffers a chronic depletion in phosphorus availability, more aeolian dust deposition than any other basin in the world’s oceans, and significant nutrient inputs from important rivers like the Amazon and the Congo. These characteristics make it unique in comparison with other oceanic basins. After five decades of intensive research, here we present a comprehensive review of our current understanding of diazotrophic activity in the NA from both a geochemical and biological perspective. We discuss the advantages and disadvantages of current methods, future perspectives, and questions which remain to be answered.

Newly Discovered Ebola Virus Associated with Hemorrhagic Fever Outbreak in Uganda

Science.gov (United States)

Towner, Jonathan S.; Sealy, Tara K.; Khristova, Marina L.; Albariño, César G.; Conlan, Sean; Reeder, Serena A.; Quan, Phenix-Lan; Lipkin, W. Ian; Downing, Robert; Tappero, Jordan W.; Okware, Samuel; Lutwama, Julius; Bakamutumaho, Barnabas; Kayiwa, John; Comer, James A.; Rollin, Pierre E.; Ksiazek, Thomas G.; Nichol, Stuart T.

2008-01-01

Over the past 30 years, Zaire and Sudan ebolaviruses have been responsible for large hemorrhagic fever (HF) outbreaks with case fatalities ranging from 53% to 90%, while a third species, Côte d'Ivoire ebolavirus, caused a single non-fatal HF case. In November 2007, HF cases were reported in Bundibugyo District, Western Uganda. Laboratory investigation of the initial 29 suspect-case blood specimens by classic methods (antigen capture, IgM and IgG ELISA) and a recently developed random-primed pyrosequencing approach quickly identified this to be an Ebola HF outbreak associated with a newly discovered ebolavirus species (Bundibugyo ebolavirus) distantly related to the Côte d'Ivoire ebolavirus found in western Africa. Due to the sequence divergence of this new virus relative to all previously recognized ebolaviruses, these findings have important implications for design of future diagnostic assays to monitor Ebola HF disease in humans and animals, and ongoing efforts to develop effective antivirals and vaccines. PMID:19023410

Discovering Diabetes Complications: an Ontology Based Model.

Science.gov (United States)

Daghistani, Tahani; Shammari, Riyad Al; Razzak, Muhammad Imran

2015-12-01

Diabetes is a serious disease that spread in the world dramatically. The diabetes patient has an average of risk to experience complications. Take advantage of recorded information to build ontology as information technology solution will help to predict patients who have average of risk level with certain complication. It is helpful to search and present patient's history regarding different risk factors. Discovering diabetes complications could be useful to prevent or delay the complications. We designed ontology based model, using adult diabetes patients' data, to discover the rules of diabetes with its complications in disease to disease relationship. Various rules between different risk factors of diabetes Patients and certain complications generated. Furthermore, new complications (diseases) might be discovered as new finding of this study, discovering diabetes complications could be useful to prevent or delay the complications. The system can identify the patients who are suffering from certain risk factors such as high body mass index (obesity) and starting controlling and maintaining plan.

Recommendations on Future Science and Engineering Studies for Ocean Color

Science.gov (United States)

Mannino, Antonio

2015-01-01

The Ocean Health Index measured Ecological Integrity as the relative condition of assessed species in a given location. This was calculated as the weighted sum of the International Union for Conservation of Natures (IUCN) assessments of species. Weights used were based on the level of extinction risk following Butchart et al.2007: EX (extinct) 0.0, CR (critically endangered) 0.2, EN (endangered) 0.5, VU (vulnerable) 0.7, NT (not threatened) 0.9, and LC (least concern) 0.99. For primarily coastal goals, the spatial average of these per pixel scores was based on a 3nmi buffer; for goals derived from all ocean waters, the spatial average was computed for the entire EEZ.

Plasmid Transfer in the Ocean – A Case Study from the Roseobacter Group

Directory of Open Access Journals (Sweden)

Jörn Petersen

2017-07-01

Full Text Available Plasmid mediated horizontal gene transfer (HGT has been speculated to be one of the prime mechanisms for the adaptation of roseobacters (Rhodobacteraceae to their ecological niches in the marine habitat. Their plasmids contain ecologically crucial functional modules of up to ∼40-kb in size, e.g., for aerobic anoxygenic photosynthesis, flagellar formation and the biosynthesis of the antibiotic tropodithietic acid. Furthermore, the widely present type four secretion system (T4SS of roseobacters has been shown to mediate conjugation across genus barriers, albeit in the laboratory. Here we discovered that Confluentimicrobium naphthalenivorans NS6T, a tidal flat bacterium isolated in Korea, carries a 185-kb plasmid, which exhibits a long-range synteny with the conjugative 126-kb plasmid of Dinoroseobacter shibae DFL12T. Both replicons are stably maintained by RepABC operons of the same compatibility group (-2 and they harbor a homologous T4SS. Principal component analysis of the codon usage shows a large similarity between the two plasmids, while the chromosomes are very distinct, showing that neither of the two bacterial species represents the original host of those RepABC-2 type plasmids. The two species do not share a common habitat today and they are phylogenetically only distantly related. Our finding demonstrates the first clear-cut evidence for conjugational plasmid transfer across biogeographical and phylogenetic barriers in Rhodobacteraceae and documents the importance of conjugative HGT in the ocean.

Grass Roots Design for the Ocean Science of Tomorrow

Science.gov (United States)

Jul, S.; Peach, C. L.; Kilb, D. L.; Schofield, O.; Fisher, C.; Quintana, C.; Keen, C. S.

2010-12-01

Current technologies offer the opportunity for ocean science to expand its traditional expeditionary base by embracing e-science methods of continuous interactive real-time research. The Ocean Observatories Initiative Cyberinfrastructure (OOI CI) is an NSF-funded effort to develop a national cyberinfrastructure that will allow researchers, educators and others to share in this new type of oceanography. The OOI is an environmental observatory spanning coastal waters to the deep ocean, enabled by the CI to offer scientists continuous interactive access to instruments in the ocean, and allow them to search, subscribe to and access real-time or archival data streams. It will also supply interactive analysis and visualization tools, and a virtual social environment for discovering and realizing collaborative opportunities. Most importantly, it provides an extensible open-access cyberinfrastructure that supports integration of new technologies and observatories, and which will allow adoption of its tools elsewhere, such as by the Integrated Ocean Observing System (IOOS). The eventual success of such a large and flexible system requires the input of a large number of people, and user-centered design has been a driving philosophy of the OOI CI from its beginning. Support for users’ real needs cannot be designed as an add-on or casual afterthought, but must be deeply embedded in all aspects of a project, from inception through architecture, implementation, and deployment. The OOI CI strategy is to employ the skills and knowledge of a small number of user experience professionals to channel and guide a very large collective effort to deliver tools, interfaces and interactions that are intellectually stimulating, scientifically productive, and conducive to innovation. Participation from all parts of the user community early in the design process is vital to meeting these goals. The OOI user experience team will be on hand to meet members of the Earth and ocean sciences

Distribution of pelagic harpacticoid copepods from the Indian ocean

Digital Repository Service at National Institute of Oceanography (India)

Haridas, P.; Rao, T.S.S.

Pelagic harpacticoid copepods have been studied from the International Indian Ocean Expedition collections. Macrosetella gracilis and Miracia efferata were the most common species of harpacticoids with high densities near land masses. Other three...

Impact of ocean acidification and warming on the productivity of a rock pool community.

Science.gov (United States)

Legrand, Erwann; Riera, Pascal; Bohner, Olivier; Coudret, Jérôme; Schlicklin, Ferdinand; Derrien, Marie; Martin, Sophie

2018-05-01

This study examined experimentally the combined effect of ocean acidification and warming on the productivity of rock pool multi-specific assemblages, composed of coralline algae, fleshy algae, and grazers. Natural rock pool communities experience high environmental fluctuations. This may confer physiological advantage to rock pool communities when facing predicted acidification and warming. The effect of ocean acidification and warming have been assessed at both individual and assemblage level to examine the importance of species interactions in the response of assemblages. We hypothesized that rock pool assemblages have physiological advantage when facing predicted ocean acidification and warming. Species exhibited species-specific responses to increased temperature and pCO 2 . Increased temperature and pCO 2 have no effect on assemblage photosynthesis, which was mostly influenced by fleshy algal primary production. The response of coralline algae to ocean acidification and warming depended on the season, which evidenced the importance of physiological adaptations to their environment in their response to climate change. We suggest that rock pool assemblages are relatively robust to changes in temperature and pCO 2 , in terms of primary production. Copyright © 2018 Elsevier Ltd. All rights reserved.

Transgenerational acclimation of fishes to climate change and ocean acidification

OpenAIRE

Munday, Philip L.

2014-01-01

There is growing concern about the impacts of climate change and ocean acidification on marine organisms and ecosystems, yet the potential for acclimation and adaptation to these threats is poorly understood. Whereas many short-term experiments report negative biological effects of ocean warming and acidification, new studies show that some marine species have the capacity to acclimate to warmer and more acidic environments across generations. Consequently, transgenerational plasticity may be...

76 FR 14923 - Endangered and Threatened Species; Take of Anadromous Fish

Science.gov (United States)

2011-03-18

... and Threatened Species; Take of Anadromous Fish AGENCY: National Marine Fisheries Service (NMFS... knowledge of species listed under the Endangered Species Act (ESA) and help guide management and... harvested groundfish species. The survey would collect data on 90+ fish species in the ocean to fulfill the...

Dive and Discover: Bringing Oceanographic Research into the Classroom and to the General Public

Science.gov (United States)

Fornari, D. J.; Fino, D.; Humphris, S. E.; Fruth, L. L.; Dean, S.

2001-12-01

We have developed the "Dive and Discover" web site for use in classrooms and for the general public to provide near real-time, daily access to oceanographic research expeditions, particularly those using deep submergence vehicles operated by Woods Hole Oceanographic Institution. The site was one of five science sites nominated for a 2001 Webby Award, was selected by Scientific American as one of the top five sites in the category of earth and environmental science, and was one of Eisenhower National Clearinghouse's "digital dozen" for science resources. The web site consists of two major components. A series of educational modules provide both general educational information about the oceans and the people that study them, as well as cruise-specific information about the natural systems being studied, the participating scientists, and the data and sample-collecting methodologies and technologies being used. The second component consists of modules that allow access to near real-time updates of the progress of the cruise, images of seafloor features and animals, samples of data being collected and used on board, and general information about life on board. In addition, a Mail Buoy provides e-mail access for students to ask questions of the scientists on board the ship during the course of the expedition. COSI Toledo have a linked Educator's Companion that gives access to COSI project management tips, background information, activities, correlations to national science education standards, assessment tools, and a vast array of resources to assist educators in using the web site. We have worked with teachers and students from all over the United States to test, evaluate, and refine the web site during five cruises in the Pacific and Indian Oceans over the last two years. These cruises focused on various problems associated with mid-ocean ridge volcanism, and the chemical, physical and biological processes associated with seafloor hydrothermal activity. Our intention

Zoogeography of Elasmobranchs in the Colombian Pacific Ocean and Caribbean Sea

Directory of Open Access Journals (Sweden)

Andrés Felipe Navia

Full Text Available ABSTRACT In order to investigate zoogeographical patterns of the marine elasmobranch species of Colombia, species richness of the Pacific and Caribbean and their subareas (Coastal Pacific, Oceanic Pacific, Coastal Caribbean, Oceanic Caribbean was analyzed. The areas shared 10 families, 10 genera and 16 species of sharks, and eight families, three genera and four species of batoids. Carcharhinidae had the highest contribution to shark richness, whereas Rajidae and Urotrygonidae had the greatest contribution to batoid richness in the Caribbean and Pacific, respectively. Most elasmobranchs were associated with benthic and coastal habitats. The similarity analysis allowed the identification of five groups of families, which characterize the elasmobranch richness in both areas. Beta diversity indicated that most species turnover occurred between the Coastal Pacific and the two Caribbean subareas. The difference in species richness and composition between areas may be due to vicariant events such as the emergence of the Isthmus of Panama. It is unlikely that the Colombian elasmobranch diversity originated from a single colonization event. Local diversification/speciation, dispersal from the non-tropical regions of the Americas, a Pacific dispersion and an Atlantic dispersion are origin possibilities without any of them excluding the others.

Reviews and Syntheses: Responses of coccolithophores to ocean acidification: a meta-analysis

Science.gov (United States)

Meyer, J.; Riebesell, U.

2015-03-01

Concerning their sensitivity to ocean acidification, coccolithophores, a group of calcifying single-celled phytoplankton, are one of the best-studied groups of marine organisms. However, in spite of the large number of studies investigating coccolithophore physiological responses to ocean acidification, uncertainties still remain due to variable and partly contradictory results. In the present study we have used all existing data in a meta-analysis to estimate the effect size of future pCO2 changes on the rates of calcification and photosynthesis and the ratio of particulate inorganic to organic carbon (PIC / POC) in different coccolithophore species. Our results indicate that ocean acidification has a negative effect on calcification and the cellular PIC / POC ratio in the two most abundant coccolithophore species: Emiliania huxleyi and Gephyrocapsa oceanica. In contrast, the more heavily calcified species Coccolithus braarudii did not show a distinct response when exposed to elevated pCO2/reduced pH. Photosynthesis in Gephyrocapsa oceanica was positively affected by high CO2, while no effect was observed for the other coccolithophore species. There was no indication that the method of carbonate chemistry manipulation was responsible for the inconsistent results regarding observed responses in calcification and the PIC / POC ratio. The perturbation method, however, appears to affect photosynthesis, as responses varied significantly between total alkalinity (TA) and dissolved inorganic carbon (DIC) manipulations. These results emphasize that coccolithophore species respond differently to ocean acidification, both in terms of calcification and photosynthesis. Where negative effects occur, they become evident at CO2 levels in the range projected for this century in the case of unabated CO2 emissions. As the data sets used in this meta-analysis do not account for adaptive responses, ecological fitness and ecosystem interactions, the question remains as to how these

Discovering Wavelets

CERN Document Server

Aboufadel, Edward

1999-01-01

An accessible and practical introduction to wavelets. With applications in image processing, audio restoration, seismology, and elsewhere, wavelets have been the subject of growing excitement and interest over the past several years. Unfortunately, most books on wavelets are accessible primarily to research mathematicians. Discovering Wavelets presents basic and advanced concepts of wavelets in a way that is accessible to anyone with only a fundamental knowledge of linear algebra. The basic concepts of wavelet theory are introduced in the context of an explanation of how the FBI uses wavelets

The growth of finfish in global open-ocean aquaculture under climate change.

Science.gov (United States)

Klinger, Dane H; Levin, Simon A; Watson, James R

2017-10-11

Aquaculture production is projected to expand from land-based operations to the open ocean as demand for seafood grows and competition increases for inputs to land-based aquaculture, such as freshwater and suitable land. In contrast to land-based production, open-ocean aquaculture is constrained by oceanographic factors, such as current speeds and seawater temperature, which are dynamic in time and space, and cannot easily be controlled. As such, the potential for offshore aquaculture to increase seafood production is tied to the physical state of the oceans. We employ a novel spatial model to estimate the potential of open-ocean finfish aquaculture globally, given physical, biological and technological constraints. Finfish growth potential for three common aquaculture species representing different thermal guilds-Atlantic salmon ( Salmo salar ), gilthead seabream ( Sparus aurata ) and cobia ( Rachycentron canadum )-is compared across species and regions and with climate change, based on outputs of a high-resolution global climate model. Globally, there are ample areas that are physically suitable for fish growth and potential expansion of the nascent aquaculture industry. The effects of climate change are heterogeneous across species and regions, but areas with existing aquaculture industries are likely to see increases in growth rates. In areas where climate change results in reduced growth rates, adaptation measures, such as selective breeding, can probably offset potential production losses. © 2017 The Author(s).

Effects of hypoxia and ocean acidification on the upper thermal niche boundaries of coral reef fishes.

Science.gov (United States)

Ern, Rasmus; Johansen, Jacob L; Rummer, Jodie L; Esbaugh, Andrew J

2017-07-01

Rising ocean temperatures are predicted to cause a poleward shift in the distribution of marine fishes occupying the extent of latitudes tolerable within their thermal range boundaries. A prevailing theory suggests that the upper thermal limits of fishes are constrained by hypoxia and ocean acidification. However, some eurythermal fish species do not conform to this theory, and maintain their upper thermal limits in hypoxia. Here we determine if the same is true for stenothermal species. In three coral reef fish species we tested the effect of hypoxia on upper thermal limits, measured as critical thermal maximum (CT max ). In one of these species we also quantified the effect of hypoxia on oxygen supply capacity, measured as aerobic scope (AS). In this species we also tested the effect of elevated CO 2 (simulated ocean acidification) on the hypoxia sensitivity of CT max We found that CT max was unaffected by progressive hypoxia down to approximately 35 mmHg, despite a substantial hypoxia-induced reduction in AS. Below approximately 35 mmHg, CT max declined sharply with water oxygen tension ( P w O 2 ). Furthermore, the hypoxia sensitivity of CT max was unaffected by elevated CO 2 Our findings show that moderate hypoxia and ocean acidification do not constrain the upper thermal limits of these tropical, stenothermal fishes. © 2017 The Author(s).

Oceanic rafting by a coastal community.

Science.gov (United States)

Fraser, Ceridwen I; Nikula, Raisa; Waters, Jonathan M

2011-03-07

Oceanic rafting is thought to play a fundamental role in assembling the biological communities of isolated coastal ecosystems. Direct observations of this key ecological and evolutionary process are, however, critically lacking. The importance of macroalgal rafting as a dispersal mechanism has remained uncertain, largely owing to lack of knowledge about the capacity of fauna to survive long voyages at sea and successfully make landfall and establish. Here, we directly document the rafting of a diverse assemblage of intertidal organisms across several hundred kilometres of open ocean, from the subantarctic to mainland New Zealand. Multispecies analyses using phylogeographic and ecological data indicate that 10 epifaunal invertebrate species rafted on six large bull kelp specimens for several weeks from the subantarctic Auckland and/or Snares Islands to the Otago coast of New Zealand, a minimum distance of some 400-600 km. These genetic data are the first to demonstrate that passive rafting can enable simultaneous trans-oceanic transport and landfall of numerous coastal taxa.

Projected range contractions of European protected oceanic montane plant communities: focus on climate change impacts is essential for their future conservation.

Science.gov (United States)

Hodd, Rory L; Bourke, David; Skeffington, Micheline Sheehy

2014-01-01

Global climate is rapidly changing and while many studies have investigated the potential impacts of this on the distribution of montane plant species and communities, few have focused on those with oceanic montane affinities. In Europe, highly sensitive bryophyte species reach their optimum occurrence, highest diversity and abundance in the north-west hyperoceanic regions, while a number of montane vascular plant species occur here at the edge of their range. This study evaluates the potential impact of climate change on the distribution of these species and assesses the implications for EU Habitats Directive-protected oceanic montane plant communities. We applied an ensemble of species distribution modelling techniques, using atlas data of 30 vascular plant and bryophyte species, to calculate range changes under projected future climate change. The future effectiveness of the protected area network to conserve these species was evaluated using gap analysis. We found that the majority of these montane species are projected to lose suitable climate space, primarily at lower altitudes, or that areas of suitable climate will principally shift northwards. In particular, rare oceanic montane bryophytes have poor dispersal capacity and are likely to be especially vulnerable to contractions in their current climate space. Significantly different projected range change responses were found between 1) oceanic montane bryophytes and vascular plants; 2) species belonging to different montane plant communities; 3) species categorised according to different biomes and eastern limit classifications. The inclusion of topographical variables in addition to climate, significantly improved the statistical and spatial performance of models. The current protected area network is projected to become less effective, especially for specialised arctic-montane species, posing a challenge to conserving oceanic montane plant communities. Conservation management plans need significantly

Projected range contractions of European protected oceanic montane plant communities: focus on climate change impacts is essential for their future conservation.

Directory of Open Access Journals (Sweden)

Rory L Hodd

Full Text Available Global climate is rapidly changing and while many studies have investigated the potential impacts of this on the distribution of montane plant species and communities, few have focused on those with oceanic montane affinities. In Europe, highly sensitive bryophyte species reach their optimum occurrence, highest diversity and abundance in the north-west hyperoceanic regions, while a number of montane vascular plant species occur here at the edge of their range. This study evaluates the potential impact of climate change on the distribution of these species and assesses the implications for EU Habitats Directive-protected oceanic montane plant communities. We applied an ensemble of species distribution modelling techniques, using atlas data of 30 vascular plant and bryophyte species, to calculate range changes under projected future climate change. The future effectiveness of the protected area network to conserve these species was evaluated using gap analysis. We found that the majority of these montane species are projected to lose suitable climate space, primarily at lower altitudes, or that areas of suitable climate will principally shift northwards. In particular, rare oceanic montane bryophytes have poor dispersal capacity and are likely to be especially vulnerable to contractions in their current climate space. Significantly different projected range change responses were found between 1 oceanic montane bryophytes and vascular plants; 2 species belonging to different montane plant communities; 3 species categorised according to different biomes and eastern limit classifications. The inclusion of topographical variables in addition to climate, significantly improved the statistical and spatial performance of models. The current protected area network is projected to become less effective, especially for specialised arctic-montane species, posing a challenge to conserving oceanic montane plant communities. Conservation management plans need

Warm ocean processes and carbon cycling in the Eocene.

Science.gov (United States)

John, Eleanor H; Pearson, Paul N; Coxall, Helen K; Birch, Heather; Wade, Bridget S; Foster, Gavin L

2013-10-28

Sea surface and subsurface temperatures over large parts of the ocean during the Eocene epoch (55.5-33.7 Ma) exceeded modern values by several degrees, which must have affected a number of oceanic processes. Here, we focus on the effect of elevated water column temperatures on the efficiency of the biological pump, particularly in relation to carbon and nutrient cycling. We use stable isotope values from exceptionally well-preserved planktonic foraminiferal calcite from Tanzania and Mexico to reconstruct vertical carbon isotope gradients in the upper water column, exploiting the fact that individual species lived and calcified at different depths. The oxygen isotope ratios of different species' tests are used to estimate the temperature of calcification, which we converted to absolute depths using Eocene temperature profiles generated by general circulation models. This approach, along with potential pitfalls, is illustrated using data from modern core-top assemblages from the same area. Our results indicate that, during the Early and Middle Eocene, carbon isotope gradients were steeper (and larger) through the upper thermocline than in the modern ocean. This is consistent with a shallower average depth of organic matter remineralization and supports previously proposed hypotheses that invoke high metabolic rates in a warm Eocene ocean, leading to more efficient recycling of organic matter and reduced burial rates of organic carbon.

From laboratory manipulations to Earth system models: scaling calcification impacts of ocean acidification

Directory of Open Access Journals (Sweden)

J. R. Young

2009-11-01

Full Text Available The observed variation in the calcification responses of coccolithophores to changes in carbonate chemistry paints a highly incoherent picture, particularly for the most commonly cultured "species", Emiliania huxleyi. The disparity between magnitude and potentially even sign of the calcification change under simulated end-of-century ocean surface chemical changes (higher pCO₂, lower pH and carbonate saturation, raises challenges to quantifying future carbon cycle impacts and feedbacks because it introduces significant uncertainty in parameterizations used for global models. Here we compile the results of coccolithophore carbonate chemistry manipulation experiments and review how ocean carbon cycle models have attempted to bridge the gap from experiments to global impacts. Although we can rule out methodological differences in how carbonate chemistry is altered as introducing an experimental bias, the absence of a consistent calcification response implies that model parameterizations based on small and differing subsets of experimental observations will lead to varying estimates for the global carbon cycle impacts of ocean acidification. We highlight two pertinent observations that might help: (1 the degree of coccolith calcification varies substantially, both between species and within species across different genotypes, and (2 the calcification response across mesocosm and shipboard incubations has so-far been found to be relatively consistent. By analogy to descriptions of plankton growth rate vs. temperature, such as the "Eppley curve", which seek to encapsulate the net community response via progressive assemblage change rather than the response of any single species, we posit that progressive future ocean acidification may drive a transition in dominance from more to less heavily calcified coccolithophores. Assemblage shift may be more important to integrated community calcification response than species

Genes Suggest Ancestral Colour Polymorphisms Are Shared across Morphologically Cryptic Species in Arctic Bumblebees.

Directory of Open Access Journals (Sweden)

Paul H Williams

Full Text Available Our grasp of biodiversity is fine-tuned through the process of revisionary taxonomy. If species do exist in nature and can be discovered with available techniques, then we expect these revisions to converge on broadly shared interpretations of species. But for the primarily arctic bumblebees of the subgenus Alpinobombus of the genus Bombus, revisions by some of the most experienced specialists are unusual for bumblebees in that they have all reached different conclusions on the number of species present. Recent revisions based on skeletal morphology have concluded that there are from four to six species, while variation in colour pattern of the hair raised questions as to whether at least seven species might be present. Even more species are supported if we accept the recent move away from viewing species as morphotypes to viewing them instead as evolutionarily independent lineages (EILs using data from genes. EILs are recognised here in practice from the gene coalescents that provide direct evidence for their evolutionary independence. We show from fitting both general mixed Yule/coalescent (GMYC models and Poisson-tree-process (PTP models to data for the mitochondrial COI gene that there is support for nine species in the subgenus Alpinobombus. Examination of the more slowly evolving nuclear PEPCK gene shows further support for a previously unrecognised taxon as a new species in northwestern North America. The three pairs of the most morphologically similar sister species are separated allopatrically and prevented from interbreeding by oceans. We also find that most of the species show multiple shared colour patterns, giving the appearance of mimicry among parts of the different species. However, reconstructing ancestral colour-pattern states shows that speciation is likely to have cut across widespread ancestral polymorphisms, without or largely without convergence. In the particular case of Alpinobombus, morphological, colour-pattern, and

National Oceanic and Atmospheric Administration's Cetacean and Sound Mapping Effort: Continuing Forward with an Integrated Ocean Noise Strategy.

Science.gov (United States)

Harrison, Jolie; Ferguson, Megan; Gedamke, Jason; Hatch, Leila; Southall, Brandon; Van Parijs, Sofie

2016-01-01

To help manage chronic and cumulative impacts of human activities on marine mammals, the National Oceanic and Atmospheric Administration (NOAA) convened two working groups, the Underwater Sound Field Mapping Working Group (SoundMap) and the Cetacean Density and Distribution Mapping Working Group (CetMap), with overarching effort of both groups referred to as CetSound, which (1) mapped the predicted contribution of human sound sources to ocean noise and (2) provided region/time/species-specific cetacean density and distribution maps. Mapping products were presented at a symposium where future priorities were identified, including institutionalization/integration of the CetSound effort within NOAA-wide goals and programs, creation of forums and mechanisms for external input and funding, and expanded outreach/education. NOAA is subsequently developing an ocean noise strategy to articulate noise conservation goals and further identify science and management actions needed to support them.

Solutions for ecosystem-level protection of ocean systems under climate change.

Science.gov (United States)

Queirós, Ana M; Huebert, Klaus B; Keyl, Friedemann; Fernandes, Jose A; Stolte, Willem; Maar, Marie; Kay, Susan; Jones, Miranda C; Hamon, Katell G; Hendriksen, Gerrit; Vermard, Youen; Marchal, Paul; Teal, Lorna R; Somerfield, Paul J; Austen, Melanie C; Barange, Manuel; Sell, Anne F; Allen, Icarus; Peck, Myron A

2016-12-01

The Paris Conference of Parties (COP21) agreement renewed momentum for action against climate change, creating the space for solutions for conservation of the ocean addressing two of its largest threats: climate change and ocean acidification (CCOA). Recent arguments that ocean policies disregard a mature conservation research field and that protected areas cannot address climate change may be oversimplistic at this time when dynamic solutions for the management of changing oceans are needed. We propose a novel approach, based on spatial meta-analysis of climate impact models, to improve the positioning of marine protected areas to limit CCOA impacts. We do this by estimating the vulnerability of ocean ecosystems to CCOA in a spatially explicit manner and then co-mapping human activities such as the placement of renewable energy developments and the distribution of marine protected areas. We test this approach in the NE Atlantic considering also how CCOA impacts the base of the food web which supports protected species, an aspect often neglected in conservation studies. We found that, in this case, current regional conservation plans protect areas with low ecosystem-level vulnerability to CCOA, but disregard how species may redistribute to new, suitable and productive habitats. Under current plans, these areas remain open to commercial extraction and other uses. Here, and worldwide, ocean conservation strategies under CCOA must recognize the long-term importance of these habitat refuges, and studies such as this one are needed to identify them. Protecting these areas creates adaptive, climate-ready and ecosystem-level policy options for conservation, suitable for changing oceans. © 2016 John Wiley & Sons Ltd.

Divergent ecosystem responses within a benthic marine community to ocean acidification.

Science.gov (United States)

Kroeker, Kristy J; Micheli, Fiorenza; Gambi, Maria Cristina; Martz, Todd R

2011-08-30

Ocean acidification is predicted to impact all areas of the oceans and affect a diversity of marine organisms. However, the diversity of responses among species prevents clear predictions about the impact of acidification at the ecosystem level. Here, we used shallow water CO(2) vents in the Mediterranean Sea as a model system to examine emergent ecosystem responses to ocean acidification in rocky reef communities. We assessed in situ benthic invertebrate communities in three distinct pH zones (ambient, low, and extreme low), which differed in both the mean and variability of seawater pH along a continuous gradient. We found fewer taxa, reduced taxonomic evenness, and lower biomass in the extreme low pH zones. However, the number of individuals did not differ among pH zones, suggesting that there is density compensation through population blooms of small acidification-tolerant taxa. Furthermore, the trophic structure of the invertebrate community shifted to fewer trophic groups and dominance by generalists in extreme low pH, suggesting that there may be a simplification of food webs with ocean acidification. Despite high variation in individual species' responses, our findings indicate that ocean acidification decreases the diversity, biomass, and trophic complexity of benthic marine communities. These results suggest that a loss of biodiversity and ecosystem function is expected under extreme acidification scenarios.

Impacts of Ocean Acidification

Energy Technology Data Exchange (ETDEWEB)

Bijma, Jelle (Alfred Wegener Inst., D-27570 Bremerhaven (Germany)) (and others)

2009-08-15

There is growing scientific evidence that, as a result of increasing anthropogenic carbon dioxide (CO{sub 2}) emissions, absorption of CO{sub 2} by the oceans has already noticeably increased the average oceanic acidity from pre-industrial levels. This global threat requires a global response. According to the Intergovernmental Panel on Climate Change (IPCC), continuing CO{sub 2} emissions in line with current trends could make the oceans up to 150% more acidic by 2100 than they were at the beginning of the Anthropocene. Acidification decreases the ability of the ocean to absorb additional atmospheric CO{sub 2}, which implies that future CO{sub 2} emissions are likely to lead to more rapid global warming. Ocean acidification is also problematic because of its negative effects on marine ecosystems, especially marine calcifying organisms, and marine resources and services upon which human societies largely depend such as energy, water, and fisheries. For example, it is predicted that by 2100 around 70% of all cold-water corals, especially those in the higher latitudes, will live in waters undersaturated in carbonate due to ocean acidification. Recent research indicates that ocean acidification might also result in increasing levels of jellyfish in some marine ecosystems. Aside from direct effects, ocean acidification together with other global change-induced impacts such as marine and coastal pollution and the introduction of invasive alien species are likely to result in more fragile marine ecosystems, making them more vulnerable to other environmental impacts resulting from, for example, coastal deforestation and widescale fisheries. The Marine Board-ESF Position Paper on the Impacts of Climate Change on the European Marine and Coastal Environment - Ecosystems indicated that presenting ocean acidification issues to policy makers is a key issue and challenge. Indeed, as the consequences of ocean acidification are expected to emerge rapidly and drastically, but are

The influence of historical climate changes on Southern Ocean marine predator populations: a comparative analysis.

Science.gov (United States)

Younger, Jane L; Emmerson, Louise M; Miller, Karen J

2016-02-01

The Southern Ocean ecosystem is undergoing rapid physical and biological changes that are likely to have profound implications for higher-order predators. Here, we compare the long-term, historical responses of Southern Ocean predators to climate change. We examine palaeoecological evidence for changes in the abundance and distribution of seabirds and marine mammals, and place these into context with palaeoclimate records in order to identify key environmental drivers associated with population changes. Our synthesis revealed two key factors underlying Southern Ocean predator population changes; (i) the availability of ice-free ground for breeding and (ii) access to productive foraging grounds. The processes of glaciation and sea ice fluctuation were key; the distributions and abundances of elephant seals, snow petrels, gentoo, chinstrap and Adélie penguins all responded strongly to the emergence of new breeding habitat coincident with deglaciation and reductions in sea ice. Access to productive foraging grounds was another limiting factor, with snow petrels, king and emperor penguins all affected by reduced prey availability in the past. Several species were isolated in glacial refugia and there is evidence that refuge populations were supported by polynyas. While the underlying drivers of population change were similar across most Southern Ocean predators, the individual responses of species to environmental change varied because of species specific factors such as dispersal ability and environmental sensitivity. Such interspecific differences are likely to affect the future climate change responses of Southern Ocean marine predators and should be considered in conservation plans. Comparative palaeoecological studies are a valuable source of long-term data on species' responses to environmental change that can provide important insights into future climate change responses. This synthesis highlights the importance of protecting productive foraging grounds

A Combined Bioinformatics and Functional Metagenomics Approach to Discovering Lipolytic Biocatalysts

Directory of Open Access Journals (Sweden)

Thorsten eMasuch

2015-10-01

Full Text Available The majority of protein sequence data published today is of metagenomic origin. However, our ability to assign functions to these sequences is often hampered by our general inability to cultivate the larger part of microbial species and the sheer amount of sequence data generated in these projects. Here we present a combination of bioinformatics, synthetic biology and Escherichia coli genetics to discover biocatalysts in metagenomic datasets. We created a subset of the Global Ocean Sampling dataset, the largest metagenomic project published to date, by removing all proteins that matched Hidden Markov Models of known protein families from PFAM and TIGRFAM with high confidence (e-value > 10-5. This essentially left us with proteins with low or no homology to known protein families, still encompassing ~1.7 million different sequences. In this subset, we then identified protein families de novo with a Markov clustering algorithm. For each protein family, we defined a single representative based on its phylogenetic relationship to all other members in that family. This reduced the dataset to ~17,000 representatives of protein families with more than 10 members. Based on conserved regions typical for lipases and esterases, we selected a representative gene from a family of 27 members for synthesis. This protein, when expressed in E. coli, showed lipolytic activity towards para-nitrophenyl (pNP esters. The Km value of the enzyme was 66.68 µM for pNP-butyrate and 68.08 µM for pNP-palmitate with kcat/Km values at 3.4 x 106 and 6.6 x 105 M-1s-1, respectively. Hydrolysis of model substrates showed enantiopreference for the R-form. Reactions yielded 43% and 61% enantiomeric excess of products with ibuprofen methyl ester and 2-phenylpropanoic acid ethyl ester, respectively. The enzyme retains 50 % of its maximum activity at temperatures as low as 10 °C, its activity is enhanced in artificial seawater and buffers with higher salt concentrations with an

The discovery of deep-water seagrass meadows in a pristine Indian Ocean wilderness revealed by tracking green turtles.

Science.gov (United States)

Esteban, N; Unsworth, R K F; Gourlay, J B Q; Hays, G C

2018-03-21

Our understanding of global seagrass ecosystems comes largely from regions characterized by human impacts with limited data from habitats defined as notionally pristine. Seagrass assessments also largely focus on shallow-water coastal habitats with comparatively few studies on offshore deep-water seagrasses. We satellite tracked green turtles (Chelonia mydas), which are known to forage on seagrasses, to a remote, pristine deep-water environment in the Western Indian Ocean, the Great Chagos Bank, which lies in the heart of one of the world's largest marine protected areas (MPAs). Subsequently we used in-situ SCUBA and baited video surveys to survey the day-time sites occupied by turtles and discovered extensive monospecific seagrass meadows of Thalassodendron ciliatum. At three sites that extended over 128 km, mean seagrass cover was 74% (mean range 67-88% across the 3 sites at depths to 29 m. The mean species richness of fish in seagrass meadows was 11 species per site (mean range 8-14 across the 3 sites). High fish abundance (e.g. Siganus sutor: mean MaxN.site -1  = 38.0, SD = 53.7, n = 5) and large predatory shark (Carcharhinus amblyrhynchos) (mean MaxN.site -1  = 1.5, SD = 0.4, n = 5) were recorded at all sites. Such observations of seagrass meadows with large top predators, are limited in the literature. Given that the Great Chagos Bank extends over approximately 12,500 km 2 and many other large deep submerged banks exist across the world's oceans, our results suggest that deep-water seagrass may be far more abundant than previously suspected. Copyright © 2018 The Author(s). Published by Elsevier Ltd.. All rights reserved.

75 FR 18778 - Safety Zone; Ocean City Air Show 2010, Atlantic Ocean, Ocean City, MD

Science.gov (United States)

2010-04-13

...-AA00 Safety Zone; Ocean City Air Show 2010, Atlantic Ocean, Ocean City, MD AGENCY: Coast Guard, DHS... zone on the Atlantic Ocean in the vicinity of Ocean City, Maryland to support the Ocean City Air Show. This action is intended to restrict vessel traffic movement on the Atlantic Ocean to protect mariners...

Modeling the influence from ocean transport, mixing and grazing on phytoplankton diversity

DEFF Research Database (Denmark)

Adjou, Mohamed; Bendtsen, Jørgen; Richardson, Katherine

2012-01-01

Phytoplankton diversity, whether defined on the basis of functional groups or on the basis of numbers of individual species, is known to be heterogeneous throughout the global ocean. The factors regulating this diversity are generally poorly understood, although access to limiting nutrients...... in generating and maintaining diversity, we apply the model to quantify the potential role of zooplankton grazing and ocean transport for the coexistence of competing species and phytoplankton diversity. We analyze the sensitivity of phytoplankton biomass distributions to different types of grazing functional...... responses and show that preferential grazing on abundant species, for example as formulated by the Holling type III grazing function, is a key factor for maintaining species’ coexistence. Mixing and large-scale advection are shown to potentially have a significant impact on the distribution of phytoplankton...

Diversity and abundance of pteropods and heteropods along a latitudinal gradient across the Atlantic Ocean

NARCIS (Netherlands)

Burridge, A.K.; Goetze, E.; Wall-Palmer, D.; Le Double, S.L.; Huisman, J.; Peijnenburg, K.T.C.A.

2017-01-01

Shelled pteropods and heteropods are two independent groups of holoplanktonic gastropods that are potentially good indicators of the effects of ocean acidification. Although insight into their ecology and biogeography is important for predicting species-specific sensitivities to ocean change, the

Bythaelurus vivaldii, a new deep-water catshark (Carcharhiniformes, Scyliorhinidae) from the northwestern Indian Ocean off Somalia.

Science.gov (United States)

Weigmann, Simon; Kaschner, Carina Julia

2017-05-08

A new very small deep-water catshark, Bythaelurus vivaldii, is described based on two female specimens caught off Somalia in the northwestern Indian Ocean during the German 'Valdivia' expedition in 1899. It is morphologically closest to the recently described B. bachi, which is the only other Bythaelurus species in the western Indian Ocean that shares a stout body of large specimens and the presence of oral papillae. It further resembles B. vivaldii in the broad mouth and broad posterior head, but differs in the presence of composite oral papillae and a higher diversity in dermal denticle morphology. Additionally, the new species differs from all congeners in the western Indian Ocean in a larger pre-second dorsal fin length, a longer head, a larger interdorsal space, a larger intergill length, a longer pectoral-fin posterior margin, a shorter caudal fin, an intermediate caudal fin preventral margin, and a larger internarial width. Furthermore, the second dorsal fin of the new species is smaller than in its congeners in the western Indian Ocean except for B. lutarius, which is easily distinguished by the slender body and virtual absence of oral papillae, as well as the aforementioned further characters. An updated key to all valid species of Bythaelurus is provided.

76 FR 19052 - Endangered Species; File No. 14344

Science.gov (United States)

2011-04-06

...-named organization. The requested permit has been issued under the authority of the Endangered Species..., importing, and exporting of endangered and threatened species (50 CFR parts 222-226). The permit authorizes... DEPARTMENT OF COMMERCE National Oceanic and Atmospheric Administration RIN 0648-XA340 Endangered...

76 FR 51945 - Endangered Species; File No. 16548

Science.gov (United States)

2011-08-19

.... SUPPLEMENTARY INFORMATION: The subject permit is requested under the authority of the Endangered Species Act of... exporting of endangered and threatened species (50 CFR parts 222-226). The Springfield Science Museum is... DEPARTMENT OF COMMERCE National Oceanic and Atmospheric Administration RIN 0648-XA648 Endangered...

76 FR 45230 - Endangered Species; File No. 15802

Science.gov (United States)

2011-07-28

... INFORMATION: The subject permit is requested under the authority of the Endangered Species Act of 1973, as... of endangered and threatened species (50 CFR 222-226). The applicant proposes to monitor smalltooth... DEPARTMENT OF COMMERCE National Oceanic and Atmospheric Administration RIN 0648-XA603 Endangered...

78 FR 57132 - Endangered Species; File No. 16230

Science.gov (United States)

2013-09-17

... authorization for incidental take of sea turtles listed under the Endangered Species Act (ESA) associated with..., importing, and exporting of endangered and threatened species (50 CFR parts 222-226). This permit authorizes... DEPARTMENT OF COMMERCE National Oceanic and Atmospheric Administration RIN 0648-XC289 Endangered...

77 FR 30261 - Endangered Species; File No. 16306

Science.gov (United States)

2012-05-22

..., importing, and exporting of endangered and threatened species (50 CFR parts 222-226). The Maine Department... to the disadvantage of such endangered or threatened species, and (3) is consistent with the purposes... DEPARTMENT OF COMMERCE National Oceanic and Atmospheric Administration RIN 0648-XA712 Endangered...

Patterns of coral species richness and reef connectivity in Malaysia

NARCIS (Netherlands)

Waheed, Z.

2016-01-01

Much remains to be discovered about the biodiversity of coral reefs in Malaysia, making this area a priority for coral reef research. This thesis aims to provide insights into the patterns of reef coral species richness and the degree of reef connectivity across Malaysia. For the species richness

The potential of the ILC for discovering new particles

Energy Technology Data Exchange (ETDEWEB)

Fujii, Keisuke [High Energy Accelerator Research Organization (KEK), Ibaraki (Japan); Grojean, Christophe [DESY, Hamburg (Germany); Humboldt-Univ., Berlin (Germany). Inst. fuer Physik; ICREA, Barcelona (Spain); Peskin, Michael E. [Stanford Univ., Menlo Park, CA (United States). SLAC; Collaboration: LCC Physics Working Group; and others

2017-02-15

This paper addresses the question of whether the International Linear Collider has the capability of discovering new particles that have not already been discovered at the CERN Large Hadron Collider. We summarize the various paths to discovery offered by the ILC, and discuss them in the context of three different scenarios: 1. LHC does not discover any new particles, 2. LHC discovers some new low mass states and 3. LHC discovers new heavy particles. We will show that in each case, ILC plays a critical role in discovery of new phenomena and in pushing forward the frontiers of high-energy physics as well as our understanding of the universe in a manner which is highly complementary to that of LHC. For the busy reader, a two-page executive summary is provided at the beginning of the document.

The potential of the ILC for discovering new particles

International Nuclear Information System (INIS)

Fujii, Keisuke; Grojean, Christophe; Peskin, Michael E.

2017-02-01

This paper addresses the question of whether the International Linear Collider has the capability of discovering new particles that have not already been discovered at the CERN Large Hadron Collider. We summarize the various paths to discovery offered by the ILC, and discuss them in the context of three different scenarios: 1. LHC does not discover any new particles, 2. LHC discovers some new low mass states and 3. LHC discovers new heavy particles. We will show that in each case, ILC plays a critical role in discovery of new phenomena and in pushing forward the frontiers of high-energy physics as well as our understanding of the universe in a manner which is highly complementary to that of LHC. For the busy reader, a two-page executive summary is provided at the beginning of the document.

Phocine Distemper Virus in Northern Sea Otters in the Pacific Ocean, Alaska, USA

Science.gov (United States)

Mazet, Jonna A.K.; Gill, Verena A.; Doroff, Angela M.; Burek, Kathy A.; Hammond, John A.

2009-01-01

Phocine distemper virus (PDV) has caused 2 epidemics in harbor seals in the Atlantic Ocean but had never been identified in any Pacific Ocean species. We found that northern sea otters in Alaska are infected with PDV, which has created a disease threat to several sympatric and decreasing Pacific marine mammals. PMID:19523293

Genetic mapping of species differences via in vitro crosses in mouse embryonic stem cells

NARCIS (Netherlands)

Lazzarano, S. (Stefano); Kučka, M. (Marek); Castro, J.P.L. (João P. L.); Naumann, R. (Ronald); Medina, P. (Paloma); Fletcher, M.N.C. (Michael N. C.); Wombacher, R. (Rebecka); J.H. Gribnau (Joost); Hochepied, T. (Tino); Van Montagu, M. (Marc); C. Libert; Chan, Y.F. (Yingguang Frank)

2018-01-01

textabstractDiscovering the genetic changes underlying species differences is a central goal in evolutionary genetics. However, hybrid crosses between species in mammals often suffer from hybrid sterility, greatly complicating genetic mapping of trait variation across species. Here, we describe a

78 FR 43145 - Endangered and Threatened Species; Take of Anadromous Fish

Science.gov (United States)

2013-07-19

... DEPARTMENT OF COMMERCE National Oceanic and Atmospheric Administration RIN 0648-XC767 Endangered and Threatened Species; Take of Anadromous Fish AGENCY: National Marine Fisheries Service (NMFS), National Oceanic and Atmospheric Administration, Commerce. ACTION: Notice of availability. SUMMARY: This...

Diversity of Tanaidacea (Crustacea: Peracarida in the world's oceans--how far have we come?

Directory of Open Access Journals (Sweden)

Magdalena Blazewicz-Paszkowycz

Full Text Available Tanaidaceans are small peracarid crustaceans which occur in all marine habitats, over the full range of depths, and rarely into fresh waters. Yet they have no obligate dispersive phase in their life-cycle. Populations are thus inevitably isolated, and allopatric speciation and high regional diversity are inevitable; cosmopolitan distributions are considered to be unlikely or non-existent. Options for passive dispersion are discussed. Tanaidaceans appear to have first evolved in shallow waters, the region of greatest diversification of the Apseudomorpha and some tanaidomorph families, while in deeper waters the apseudomorphs have subsequently evolved two or three distinct phyletic lines. The Neotanaidomorpha has evolved separately and diversified globally in deep waters, and the Tanaidomorpha has undergone the greatest evolution, diversification and adaptation, to the point where some of the deep-water taxa are recolonizing shallow waters. Analysis of their geographic distribution shows some level of regional isolation, but suffers from inclusion of polyphyletic taxa and a general lack of data, particularly for deep waters. It is concluded that the diversity of the tanaidomorphs in deeper waters and in certain ocean regions remains to be discovered; that the smaller taxa are largely understudied; and that numerous cryptic species remain to be distinguished. Thus the number of species currently recognized is likely to be an order of magnitude too low, and globally the Tanaidacea potentially rival the Amphipoda and Isopoda in diversity.

Geoengineering impact of open ocean dissolution of olivine on atmospheric CO2, surface ocean pH and marine biology

International Nuclear Information System (INIS)

Köhler, Peter; Abrams, Jesse F; Völker, Christoph; Hauck, Judith; Wolf-Gladrow, Dieter A

2013-01-01

Ongoing global warming induced by anthropogenic emissions has opened the debate as to whether geoengineering is a ‘quick fix’ option. Here we analyse the intended and unintended effects of one specific geoengineering approach, which is enhanced weathering via the open ocean dissolution of the silicate-containing mineral olivine. This approach would not only reduce atmospheric CO 2 and oppose surface ocean acidification, but would also impact on marine biology. If dissolved in the surface ocean, olivine sequesters 0.28 g carbon per g of olivine dissolved, similar to land-based enhanced weathering. Silicic acid input, a byproduct of the olivine dissolution, alters marine biology because silicate is in certain areas the limiting nutrient for diatoms. As a consequence, our model predicts a shift in phytoplankton species composition towards diatoms, altering the biological carbon pumps. Enhanced olivine dissolution, both on land and in the ocean, therefore needs to be considered as ocean fertilization. From dissolution kinetics we calculate that only olivine particles with a grain size of the order of 1 μm sink slowly enough to enable a nearly complete dissolution. The energy consumption for grinding to this small size might reduce the carbon sequestration efficiency by ∼30%. (letter)

Dynamic patterns and ecological impacts of declining ocean pH in a high-resolution multi-year dataset.

Science.gov (United States)

Wootton, J Timothy; Pfister, Catherine A; Forester, James D

2008-12-02

Increasing global concentrations of atmospheric CO(2) are predicted to decrease ocean pH, with potentially severe impacts on marine food webs, but empirical data documenting ocean pH over time are limited. In a high-resolution dataset spanning 8 years, pH at a north-temperate coastal site declined with increasing atmospheric CO(2) levels and varied substantially in response to biological processes and physical conditions that fluctuate over multiple time scales. Applying a method to link environmental change to species dynamics via multispecies Markov chain models reveals strong links between in situ benthic species dynamics and variation in ocean pH, with calcareous species generally performing more poorly than noncalcareous species in years with low pH. The models project the long-term consequences of these dynamic changes, which predict substantial shifts in the species dominating the habitat as a consequence of both direct effects of reduced calcification and indirect effects arising from the web of species interactions. Our results indicate that pH decline is proceeding at a more rapid rate than previously predicted in some areas, and that this decline has ecological consequences for near shore benthic ecosystems.

78 FR 34653 - Endangered and Threatened Species; Take of Anadromous Fish

Science.gov (United States)

2013-06-10

... DEPARTMENT OF COMMERCE National Oceanic and Atmospheric Administration RIN 0648-XC717 Endangered and Threatened Species; Take of Anadromous Fish AGENCY: National Marine Fisheries Service (NMFS), National Oceanic and Atmospheric Administration, Commerce. ACTION: Notice of decision and availability of...

Genetic Isolation among the Northwestern, Southwestern and Central-Eastern Indian Ocean Populations of the Pronghorn Spiny Lobster Panulirus penicillatus

Directory of Open Access Journals (Sweden)

Muhamad Fadry Abdullah

2014-05-01

Full Text Available The pronghorn spiny lobster Panulirus penicillatus is a highly valuable species which is widely distributed in Indo-West Pacific and Eastern Pacific regions. Mitochondrial DNA control region sequences (566–571 bp were determined to investigate the population genetic structure of this species in the Indian Ocean. In total, 236 adult individuals of Panulirus penicillatus were collected from five locations in the Indian Ocean region. Almost all individuals had a unique haplotype. Intrapopulation haplotype (h and nucleotide (π diversities were high for each locality, ranging from h = 0.9986–1.0000 and π = 0.031593–0.043441. We observed distinct genetic isolation of population located at the northwestern and southwestern edge of the species range. Gene flow was found within localities in the central and eastern region of the Indian Ocean, probably resulting from an extended planktonic larval stage and prevailing ocean currents.

Ocean currents modify the coupling between climate change and biogeographical shifts.

Science.gov (United States)

García Molinos, J; Burrows, M T; Poloczanska, E S

2017-05-02

Biogeographical shifts are a ubiquitous global response to climate change. However, observed shifts across taxa and geographical locations are highly variable and only partially attributable to climatic conditions. Such variable outcomes result from the interaction between local climatic changes and other abiotic and biotic factors operating across species ranges. Among them, external directional forces such as ocean and air currents influence the dispersal of nearly all marine and many terrestrial organisms. Here, using a global meta-dataset of observed range shifts of marine species, we show that incorporating directional agreement between flow and climate significantly increases the proportion of explained variance. We propose a simple metric that measures the degrees of directional agreement of ocean (or air) currents with thermal gradients and considers the effects of directional forces in predictions of climate-driven range shifts. Ocean flows are found to both facilitate and hinder shifts depending on their directional agreement with spatial gradients of temperature. Further, effects are shaped by the locations of shifts in the range (trailing, leading or centroid) and taxonomic identity of species. These results support the global effects of climatic changes on distribution shifts and stress the importance of framing climate expectations in reference to other non-climatic interacting factors.

Fisheries and Oceans Canada - habitat management program in Ontario

Energy Technology Data Exchange (ETDEWEB)

NONE

2011-07-01

On May 5, 2011, the Ontario Waterpower Association hosted the emergent hydro workshop in Peterborough. In the course of the workshop, Fisheries and Oceans Canada presented the habitat management program in Ontario. Fisheries and Oceans Canada explained that their role is to protect water resources. The Fisheries Act was passed to manage fisheries and fish habitats in Canada and to protect them from harmful alteration, disruption or destruction. The policy for the management of fish was written to interpret the Fisheries Act and enhance the productive capacity of fish habitats. In addition, two other Acts were passed, the Species at Risk Act and the Canadian Environmental Assessment Act, designed to protect species from extinction and improve coordination of, and public access to EA information. This presentation highlighted the different existing policies aimed at protecting fisheries and fish habitats in Canada.

75 FR 13256 - Endangered Species; File No. 14176

Science.gov (United States)

2010-03-19

.... SUPPLEMENTARY INFORMATION: The subject permit is requested under the authority of the Endangered Species Act of..., and exporting of endangered and threatened species (50 CFR 222-226). The applicant is seeking a five... DEPARTMENT OF COMMERCE National Oceanic and Atmospheric Administration RIN 0648-XV28 Endangered...

78 FR 17355 - Endangered Species; File No. 17787

Science.gov (United States)

2013-03-21

.... SUPPLEMENTARY INFORMATION: The subject permit is requested under the authority of the Endangered Species Act of... exporting of endangered and threatened species (50 CFR parts 222-226). The applicant proposes to gather life... DEPARTMENT OF COMMERCE National Oceanic and Atmospheric Administration RIN 0648-XC576 Endangered...

76 FR 40699 - Endangered Species; File No. 16229

Science.gov (United States)

2011-07-11

.... SUPPLEMENTARY INFORMATION: The subject permit is requested under the authority of the Endangered Species Act of... exporting of endangered and threatened species (50 CFR 222-226). The North Carolina Zoo [File No. 16229] is... DEPARTMENT OF COMMERCE National Oceanic and Atmospheric Administration RIN 0648-XA516 Endangered...

78 FR 3882 - Endangered Species; File No. 13543

Science.gov (United States)

2013-01-17

... requested under the authority of the Endangered Species Act of 1973, as amended (16 U.S.C. 1531 et seq.) and the regulations governing the taking, importing, and exporting of endangered and threatened species... DEPARTMENT OF COMMERCE National Oceanic and Atmospheric Administration RIN 0648-XJ40 Endangered...

77 FR 58812 - Endangered Species; File No. 16733

Science.gov (United States)

2012-09-24

.... SUPPLEMENTARY INFORMATION: The subject permit is requested under the authority of the Endangered Species Act of... exporting of endangered and threatened species (50 CFR 222-226). The SEFSC requests a five-year permit to... DEPARTMENT OF COMMERCE National Oceanic and Atmospheric Administration RIN 0648-XC253 Endangered...

77 FR 31586 - Endangered Species; File No. 16556

Science.gov (United States)

2012-05-29

.... SUPPLEMENTARY INFORMATION: The subject permit is requested under the authority of the Endangered Species Act of... exporting of endangered and threatened species (50 CFR parts 222-226). The NEFSC requests a five-year permit... DEPARTMENT OF COMMERCE National Oceanic and Atmospheric Administration RIN 0648-XC037 Endangered...

78 FR 39258 - Endangered Species; File No. 18069

Science.gov (United States)

2013-07-01

.... SUPPLEMENTARY INFORMATION: The subject permit is requested under the authority of the Endangered Species Act of... exporting of endangered and threatened species (50 CFR parts 222-226). The applicant requests a five-year... DEPARTMENT OF COMMERCE National Oceanic and Atmospheric Administration RIN 0648-XC725 Endangered...

78 FR 4834 - Endangered and Threatened Species; Take of Anadromous Fish

Science.gov (United States)

2013-01-23

... DEPARTMENT OF COMMERCE National Oceanic and Atmospheric Administration RIN 0648-XC444 Endangered and Threatened Species; Take of Anadromous Fish AGENCY: National Marine Fisheries Service (NMFS... species. Dated: January 16, 2013. Angela Somma, Chief, Endangered Species Division, Office of Protected...

Tsunami-driven rafting: Transoceanic species dispersal and implications for marine biogeography.

Science.gov (United States)

Carlton, James T; Chapman, John W; Geller, Jonathan B; Miller, Jessica A; Carlton, Deborah A; McCuller, Megan I; Treneman, Nancy C; Steves, Brian P; Ruiz, Gregory M

2017-09-29

The 2011 East Japan earthquake generated a massive tsunami that launched an extraordinary transoceanic biological rafting event with no known historical precedent. We document 289 living Japanese coastal marine species from 16 phyla transported over 6 years on objects that traveled thousands of kilometers across the Pacific Ocean to the shores of North America and Hawai'i. Most of this dispersal occurred on nonbiodegradable objects, resulting in the longest documented transoceanic survival and dispersal of coastal species by rafting. Expanding shoreline infrastructure has increased global sources of plastic materials available for biotic colonization and also interacts with climate change-induced storms of increasing severity to eject debris into the oceans. In turn, increased ocean rafting may intensify species invasions. Copyright © 2017 The Authors, some rights reserved; exclusive licensee American Association for the Advancement of Science. No claim to original U.S. Government Works.

Illigera elegans (Hernandiaceae), a ner species from Christmas Island, Indian Ocean

NARCIS (Netherlands)

Duyfjes, B.E.E.

1994-01-01

Illigera elegans (Hernandiaceae) is described as a new species. The species is remarkable because it has uncleft staminal appendages, a condition up till now only found in two other species, from New Guinea and East Africa (Madagascar, Tanzania), respectively.

Confronting species distribution model predictions with species functional traits.

Science.gov (United States)

Wittmann, Marion E; Barnes, Matthew A; Jerde, Christopher L; Jones, Lisa A; Lodge, David M

2016-02-01

Species distribution models are valuable tools in studies of biogeography, ecology, and climate change and have been used to inform conservation and ecosystem management. However, species distribution models typically incorporate only climatic variables and species presence data. Model development or validation rarely considers functional components of species traits or other types of biological data. We implemented a species distribution model (Maxent) to predict global climate habitat suitability for Grass Carp (Ctenopharyngodon idella). We then tested the relationship between the degree of climate habitat suitability predicted by Maxent and the individual growth rates of both wild (N = 17) and stocked (N = 51) Grass Carp populations using correlation analysis. The Grass Carp Maxent model accurately reflected the global occurrence data (AUC = 0.904). Observations of Grass Carp growth rate covered six continents and ranged from 0.19 to 20.1 g day(-1). Species distribution model predictions were correlated (r = 0.5, 95% CI (0.03, 0.79)) with observed growth rates for wild Grass Carp populations but were not correlated (r = -0.26, 95% CI (-0.5, 0.012)) with stocked populations. Further, a review of the literature indicates that the few studies for other species that have previously assessed the relationship between the degree of predicted climate habitat suitability and species functional traits have also discovered significant relationships. Thus, species distribution models may provide inferences beyond just where a species may occur, providing a useful tool to understand the linkage between species distributions and underlying biological mechanisms.

Europa's Compositional Evolution and Ocean Salinity

Science.gov (United States)

Vance, S.; Glein, C.; Bouquet, A.; Cammarano, F.; McKinnon, W. B.

2017-12-01

Europa's ocean depth and composition have likely evolved through time, in step with the temperature of its mantle, and in concert with the loss of water and hydrogen to space and accretion of water and other chemical species from comets, dust, and Io's volcanism. A key aspect to understanding the consequences of these processes is combining internal structure models with detailed calculations of ocean composition, which to date has not been done. This owes in part to the unavailability of suitable thermodynamic databases for aqueous chemistry above 0.5 GPa. Recent advances in high pressure aqueous chemistry and water-rock interactions allow us to compute the equilibrium ionic conditions and pH everywhere in Europa's interior. In this work, we develop radial structure and composition models for Europa that include self-consistent thermodynamics of all materials, developed using the PlanetProfile software. We will describe the potential hydration states and porosity of the rocky interior, and the partitioning of primordial sulfur between this layer, an underlying metallic core, and the ocean above. We will use these results to compute the ocean's salinity by extraction from the upper part of the rocky layer. In this context, we will also consider the fluxes of reductants from Europa's interior due to high-temperature hydrothermalism, serpentinization, and endogenic radiolysis.

Mercury biogeochemical cycling in the ocean and policy implications.

Science.gov (United States)

Mason, Robert P; Choi, Anna L; Fitzgerald, William F; Hammerschmidt, Chad R; Lamborg, Carl H; Soerensen, Anne L; Sunderland, Elsie M

2012-11-01

Anthropogenic activities have enriched mercury in the biosphere by at least a factor of three, leading to increases in total mercury (Hg) in the surface ocean. However, the impacts on ocean fish and associated trends in human exposure as a result of such changes are less clear. Here we review our understanding of global mass budgets for both inorganic and methylated Hg species in ocean seawater. We consider external inputs from atmospheric deposition and rivers as well as internal production of monomethylmercury (CH₃Hg) and dimethylmercury ((CH₃)₂Hg). Impacts of large-scale ocean circulation and vertical transport processes on Hg distribution throughout the water column and how this influences bioaccumulation into ocean food chains are also discussed. Our analysis suggests that while atmospheric deposition is the main source of inorganic Hg to open ocean systems, most of the CH₃Hg accumulating in ocean fish is derived from in situ production within the upper waters (ocean basins are changing at different rates due to differences in atmospheric loading and that the deeper waters of the oceans are responding slowly to changes in atmospheric Hg inputs. Most biological exposures occur in the upper ocean and therefore should respond over years to decades to changes in atmospheric mercury inputs achieved by regulatory control strategies. Migratory pelagic fish such as tuna and swordfish are an important component of CH₃Hg exposure for many human populations and therefore any reduction in anthropogenic releases of Hg and associated deposition to the ocean will result in a decline in human exposure and risk. Copyright © 2012 Elsevier Inc. All rights reserved.

Digestion in sea urchin larvae impaired under ocean acidification

Science.gov (United States)

Stumpp, Meike; Hu, Marian; Casties, Isabel; Saborowski, Reinhard; Bleich, Markus; Melzner, Frank; Dupont, Sam

2013-12-01

Larval stages are considered as the weakest link when a species is exposed to challenging environmental changes. Reduced rates of growth and development in larval stages of calcifying invertebrates in response to ocean acidification might be caused by energetic limitations. So far no information exists on how ocean acidification affects digestive processes in marine larval stages. Here we reveal alkaline (~pH 9.5) conditions in the stomach of sea urchin larvae. Larvae exposed to decreased seawater pH suffer from a drop in gastric pH, which directly translates into decreased digestive efficiencies and triggers compensatory feeding. These results suggest that larval digestion represents a critical process in the context of ocean acidification, which has been overlooked so far.

Statistical Research on the Bioactivity of New Marine Natural Products Discovered during the 28 Years from 1985 to 2012

Science.gov (United States)

Hu, Yiwen; Chen, Jiahui; Hu, Guping; Yu, Jianchen; Zhu, Xun; Lin, Yongcheng; Chen, Shengping; Yuan, Jie

2015-01-01

Every year, hundreds of new compounds are discovered from the metabolites of marine organisms. Finding new and useful compounds is one of the crucial drivers for this field of research. Here we describe the statistics of bioactive compounds discovered from marine organisms from 1985 to 2012. This work is based on our database, which contains information on more than 15,000 chemical substances including 4196 bioactive marine natural products. We performed a comprehensive statistical analysis to understand the characteristics of the novel bioactive compounds and detail temporal trends, chemical structures, species distribution, and research progress. We hope this meta-analysis will provide useful information for research into the bioactivity of marine natural products and drug development. PMID:25574736

Discovering the Unknown: Improving Detection of Novel Species and Genera from Short Reads

Directory of Open Access Journals (Sweden)

Gail L. Rosen

2011-01-01

“unknown” class and show that the modified version of PhymmBL has similar or better overall classification performance than the other modified algorithms, especially for the species-level and ultrashort reads. Finally, we evaluate theperformance of several algorithms on a real acid mine drainage dataset.

Sulfur isotope homogeneity of oceanic DMSP and DMS.

Science.gov (United States)

Amrani, Alon; Said-Ahmad, Ward; Shaked, Yeala; Kiene, Ronald P

2013-11-12

Oceanic emissions of volatile dimethyl sulfide (DMS) represent the largest natural source of biogenic sulfur to the global atmosphere, where it mediates aerosol dynamics. To constrain the contribution of oceanic DMS to aerosols we established the sulfur isotope ratios ((34)S/(32)S ratio, δ(34)S) of DMS and its precursor, dimethylsulfoniopropionate (DMSP), in a range of marine environments. In view of the low oceanic concentrations of DMS/P, we applied a unique method for the analysis of δ(34)S at the picomole level in individual compounds. Surface water DMSP collected from six different ocean provinces revealed a remarkable consistency in δ(34)S values ranging between +18.9 and +20.3‰. Sulfur isotope composition of DMS analyzed in freshly collected seawater was similar to δ(34)S of DMSP, showing that the in situ fractionation between these species is small (DMS to the atmosphere results in a relatively small fractionation (-0.5 ± 0.2‰) compared with the seawater DMS pool. Because δ(34)S values of oceanic DMS closely reflect that of DMSP, we conclude that the homogenous δ(34)S of DMSP at the ocean surface represents the δ(34)S of DMS emitted to the atmosphere, within +1‰. The δ(34)S of oceanic DMS flux to the atmosphere is thus relatively constant and distinct from anthropogenic sources of atmospheric sulfate, thereby enabling estimation of the DMS contribution to aerosols.

76 FR 77781 - Endangered Species; File No. 15802

Science.gov (United States)

2011-12-14

.... SUPPLEMENTARY INFORMATION: The subject permit is requested under the authority of the Endangered Species Act of... exporting of endangered and threatened species (50 CFR 222-226). On July 28, 2011 (76 FR 45230), notice was... DEPARTMENT OF COMMERCE National Oceanic and Atmospheric Administration RIN 0648-XA603 Endangered...

75 FR 26715 - Endangered Species; File No. 1596

Science.gov (United States)

2010-05-12

... 29, 2009 (74 FR 38585), is requested under the authority of the Endangered Species Act of 1973, as... endangered and threatened species (50 CFR 222-226). Permit No. 1596-02 authorizes the SWFSC to capture... DEPARTMENT OF COMMERCE National Oceanic and Atmospheric Administration RIN 0648-XW36 Endangered...

78 FR 5779 - Endangered Species; File No. 16248

Science.gov (United States)

2013-01-28

... Endangered Species Act of 1973, as amended (ESA; 16 U.S.C. 1531 et seq.) and the regulations governing the taking, importing, and exporting of endangered and threatened species (50 CFR parts 222-226). The... DEPARTMENT OF COMMERCE National Oceanic and Atmospheric Administration RIN 0648-XC322 Endangered...

76 FR 48146 - Endangered Species; File No. 1551

Science.gov (United States)

2011-08-08

... subject modification to Permit No. 1551- 02 is requested under the authority of the Endangered Species Act... exporting of endangered and threatened species (50 CFR 222-226). Permit No. 1551, issued on July 24, 2008... DEPARTMENT OF COMMERCE National Oceanic and Atmospheric Administration RIN 0648-XA620 Endangered...

78 FR 38013 - Endangered Species; File No. 15661

Science.gov (United States)

2013-06-25

... authority of the Endangered Species Act of 1973, as amended (16 U.S.C. 1531 et seq.) and the regulations governing the taking, importing, and exporting of endangered and threatened species (50 CFR 222-226). Permit... DEPARTMENT OF COMMERCE National Oceanic and Atmospheric Administration RIN 0648-XA425 Endangered...

76 FR 18725 - Endangered Species; File No. 16174

Science.gov (United States)

2011-04-05

... the authority of the Endangered Species Act of 1973, as amended (ESA; 16 U.S.C. 1531 et seq.) and the regulations governing the taking, importing, and exporting of endangered and threatened species (50 CFR 222... DEPARTMENT OF COMMERCE National Oceanic and Atmospheric Administration RIN 0648-XA348 Endangered...

76 FR 45781 - Endangered Species; File No. 15552

Science.gov (United States)

2011-08-01

... Endangered Species Act of 1973, as amended (ESA; 16 U.S.C. 1531 et seq.) and the regulations governing the taking, importing, and exporting of endangered and threatened species (50 CFR parts 222-226). The five... DEPARTMENT OF COMMERCE National Oceanic and Atmospheric Administration RIN 0648-XA601 Endangered...

77 FR 65673 - Endangered Species; File No. 16248

Science.gov (United States)

2012-10-30

... subject permit is requested under the authority of the Endangered Species Act of 1973, as amended (ESA; 16... endangered and threatened species (50 CFR 222-226). The Riverbanks Zoo and Garden is requesting a permit to... DEPARTMENT OF COMMERCE National Oceanic and Atmospheric Administration RIN 0648-XC322 Endangered...

78 FR 50396 - Endangered Species; File No. 17405

Science.gov (United States)

2013-08-19

... permit has been issued under the authority of the Endangered Species Act of 1973, as amended (ESA; 16 U.S... to the disadvantage of such endangered or threatened species, and (3) is consistent with the purposes... DEPARTMENT OF COMMERCE National Oceanic and Atmospheric Administration RIN 0648-XC519 Endangered...

A Tri-Oceanic Perspective: DNA Barcoding Reveals Geographic Structure and Cryptic Diversity in Canadian Polychaetes

Science.gov (United States)

Carr, Christina M.; Hardy, Sarah M.; Brown, Tanya M.; Macdonald, Tara A.; Hebert, Paul D. N.

2011-01-01

Background Although polychaetes are one of the dominant taxa in marine communities, their distributions and taxonomic diversity are poorly understood. Recent studies have shown that many species thought to have broad distributions are actually a complex of allied species. In Canada, 12% of polychaete species are thought to occur in Atlantic, Arctic, and Pacific Oceans, but the extent of gene flow among their populations has not been tested. Methodology/Principal Findings Sequence variation in a segment of the mitochondrial cytochrome c oxidase I (COI) gene was employed to compare morphological versus molecular diversity estimates, to examine gene flow among populations of widespread species, and to explore connectivity patterns among Canada's three oceans. Analysis of 1876 specimens, representing 333 provisional species, revealed 40 times more sequence divergence between than within species (16.5% versus 0.38%). Genetic data suggest that one quarter of previously recognized species actually include two or more divergent lineages, indicating that richness in this region is currently underestimated. Few species with a tri-oceanic distribution showed genetic cohesion. Instead, large genetic breaks occur between Pacific and Atlantic-Arctic lineages, suggesting their long-term separation. High connectivity among Arctic and Atlantic regions and low connectivity with the Pacific further supports the conclusion that Canadian polychaetes are partitioned into two distinct faunas. Conclusions/Significance Results of this study confirm that COI sequences are an effective tool for species identification in polychaetes, and suggest that DNA barcoding will aid the recognition of species overlooked by the current taxonomic system. The consistent geographic structuring within presumed widespread species suggests that historical range fragmentation during the Pleistocene ultimately increased Canadian polychaete diversity and that the coastal British Columbia fauna played a minor

A tri-oceanic perspective: DNA barcoding reveals geographic structure and cryptic diversity in Canadian polychaetes.

Directory of Open Access Journals (Sweden)

Christina M Carr

Full Text Available Although polychaetes are one of the dominant taxa in marine communities, their distributions and taxonomic diversity are poorly understood. Recent studies have shown that many species thought to have broad distributions are actually a complex of allied species. In Canada, 12% of polychaete species are thought to occur in Atlantic, Arctic, and Pacific Oceans, but the extent of gene flow among their populations has not been tested.Sequence variation in a segment of the mitochondrial cytochrome c oxidase I (COI gene was employed to compare morphological versus molecular diversity estimates, to examine gene flow among populations of widespread species, and to explore connectivity patterns among Canada's three oceans. Analysis of 1876 specimens, representing 333 provisional species, revealed 40 times more sequence divergence between than within species (16.5% versus 0.38%. Genetic data suggest that one quarter of previously recognized species actually include two or more divergent lineages, indicating that richness in this region is currently underestimated. Few species with a tri-oceanic distribution showed genetic cohesion. Instead, large genetic breaks occur between Pacific and Atlantic-Arctic lineages, suggesting their long-term separation. High connectivity among Arctic and Atlantic regions and low connectivity with the Pacific further supports the conclusion that Canadian polychaetes are partitioned into two distinct faunas.Results of this study confirm that COI sequences are an effective tool for species identification in polychaetes, and suggest that DNA barcoding will aid the recognition of species overlooked by the current taxonomic system. The consistent geographic structuring within presumed widespread species suggests that historical range fragmentation during the Pleistocene ultimately increased Canadian polychaete diversity and that the coastal British Columbia fauna played a minor role in Arctic recolonization following deglaciation

Persistent organochlorines in 13 shark species from offshore and coastal waters of Korea: Species-specific accumulation and contributing factors.

Science.gov (United States)

Lee, Hyun-Kyung; Jeong, Yunsun; Lee, Sunggyu; Jeong, Woochang; Choy, Eun-Jung; Kang, Chang-Keun; Lee, Won-Chan; Kim, Sang-Jo; Moon, Hyo-Bang

2015-05-01

Data on persistent organochlorines (OCs) in sharks are scarce. Concentrations of OCs such as polychlorinated biphenyls (PCBs) and organochlorine pesticides (OCPs) were determined in the muscle tissue of 13 shark species (n=105) collected from offshore (Indian and Pacific Oceans) and coastal waters of Korea, to investigate species-specific accumulation of OCs and to assess the potential health risks associated with consumption of shark meat. Overall OC concentrations were highly variable not only among species but also within the same species of shark. The concentrations of PCBs, DDTs, chlordanes, hexachlorobenzene, and heptachlor in all shark species ranged from shark in our study were relatively lower than those reported in other studies. Aggressive shark species and species inhabiting the Indian Ocean had the highest levels of OCs. Inter-species differences in the concentrations and accumulation profiles of OCs among shark species could be explained by differences in feeding habit and sampling locations. Several confounding factors such as growth velocity, trophic position, and regional contamination status may affect the bioaccumulation of OCs in sharks. Hazard ratios of non-cancer risk for all the OCs were below one, whereas the hazard ratios of lifetime cancer risks of PCBs and DDTs exceeded one, implying potential carcinogenic effects in the general population in Korea. This is the first report to document the occurrence of OCs in sharks from Korea. Copyright © 2015 Elsevier Inc. All rights reserved.

Optimal control of an invasive species with imperfect information about the level of infestation

Science.gov (United States)

Robert G. Haight; Stephen. Polasky

2010-01-01

The presence of invasive species is often not realized until well after the species becomes established. Discovering the location and extent of infestation before the invasive species causes widespread damage typically requires intensive monitoring efforts. In this paper, we analyze the problem of controlling an invasive species when there is imperfect information...

Revision of the genus Verilus (Perciformes: Acropomatidae) with a description of a new species.

Science.gov (United States)

Yamanoue, Y

2016-11-01

The acropomatid genus Verilus is redescribed as a senior synonym of Apogonops and Neoscombrops with description of a new species and a taxonomic revision of the five species that were formerly classified in these genera. This genus is characterized by the following combination of characters: a canine tooth (rarely two) near symphysis of premaxilla of upper jaw but lacking a row of conical teeth on anterior part of outer premaxillary margin; a canine tooth (rarely two) near symphysis of dentary with only villiform or a row of conical teeth posteriorly; three anal-fin spines; 10 dorsal-fin spines; pelvic-fin spine smooth; luminous organ absent. This genus comprises six species: Verilus sordidus (type species, western Atlantic Ocean); Verilus anomalus (off southern and eastern coast of Australia); Verilus atlanticus (western Atlantic Ocean); Verilus cynodon (south-western Indian Ocean); Verilus pacificus (north-western and central Pacific Ocean); Verilus starnesi sp. nov. (Coral Sea off Chesterfield Islands, New Caledonia). These species are distinguishable from one another by dentition on the lower jaw, numbers of pectoral-fin rays, gill rakers and lateral-line scales, features of the proximal-middle radial of the first anal-fin pterygiophore, presence or absence of basioccipital fossa and body depth. © 2016 The Fisheries Society of the British Isles.

Marine Biodiversity, Climate Change, and Governance of the Oceans

OpenAIRE

Craig, Robin Kundis

2012-01-01

Governance of marine biodiversity has long suffered from lack of adequate information about the ocean’s many species and ecosystems. Nevertheless, even as we are learning much more about the ocean’s biodiversity and the impacts to it from stressors such as overfishing, habitat destruction, and marine pollution, climate change is imposing new threats and exacerbating existing threats to marine species and ecosystems. Coastal nations could vastly improve their fragmented approaches to ocean gov...

Ocean acidification impairs crab foraging behaviour.

Science.gov (United States)

Dodd, Luke F; Grabowski, Jonathan H; Piehler, Michael F; Westfield, Isaac; Ries, Justin B

2015-07-07

Anthropogenic elevation of atmospheric CO2 is driving global-scale ocean acidification, which consequently influences calcification rates of many marine invertebrates and potentially alters their susceptibility to predation. Ocean acidification may also impair an organism's ability to process environmental and biological cues. These counteracting impacts make it challenging to predict how acidification will alter species interactions and community structure. To examine effects of acidification on consumptive and behavioural interactions between mud crabs (Panopeus herbstii) and oysters (Crassostrea virginica), oysters were reared with and without caged crabs for 71 days at three pCO2 levels. During subsequent predation trials, acidification reduced prey consumption, handling time and duration of unsuccessful predation attempt. These negative effects of ocean acidification on crab foraging behaviour more than offset any benefit to crabs resulting from a reduction in the net rate of oyster calcification. These findings reveal that efforts to evaluate how acidification will alter marine food webs should include quantifying impacts on both calcification rates and animal behaviour. © 2015 The Author(s) Published by the Royal Society. All rights reserved.

Extant diversity and estimated number of Gracillariidae (Lepidoptera species yet to be discovered in the Neotropical region

Directory of Open Access Journals (Sweden)

Rosângela Brito

Full Text Available ABSTRACT Gracillariidae (Lepidoptera are commonly known by the leaf miner habit found in the larval stage of most species. By using worldwide, public databases on species diversity and DNA sequences available for extant gracillariid species, we determined changes in the rate of taxonomic species descriptions through time, mapped their spatial distributions, examined their phylogenetic diversification, and estimated the number of species yet to be described for the family in the Neotropics. We recovered 185 species, a number that is smaller than that found in any other biogeographic region. However, it was estimated that at least 3875 additional species remain to be described in the region. Phylogenetic diversification showed a pattern of expanding diversity. A few entomologists have been involved with gracillariid taxonomy in the Neotropics, having 39% of the species been described by a single taxonomist. In most of such cases, descriptions were based on the adults only. A few species have been described from biomes known to have some of the greatest diversity on earth, such as the Atlantic Forest. Thus, such a scenario results from low sampling and scarce taxonomic activity that has prevailed for this family of moths in the Neotropics. It may also be associated with their small body size and to the fact that gracillariids do not seem to be attracted to light traps as much as other moths, which make their collection and identification by non experts difficult. We also suggested scientific and political actions that could be adopted to overcome such an unfavorable scenario.

Phylogeography of Rattus norvegicus in the South Atlantic Ocean

Directory of Open Access Journals (Sweden)

Melanie Hingston

2016-12-01

Full Text Available Norway rats are a globally distributed invasive species, which have colonized many islands around the world, including in the South Atlantic Ocean. We investigated the phylogeography of Norway rats across the South Atlantic Ocean and bordering continental countries. We identified haplotypes from 517 bp of the hypervariable region I of the mitochondrial D-loop and constructed a Bayesian consensus tree and median-joining network incorporating all other publicly available haplotypes via an alignment of 364 bp. Three Norway rat haplotypes are present across the islands of the South Atlantic Ocean, including multiple haplotypes separated by geographic barriers within island groups. All three haplotypes have been previously recorded from European countries. Our results support the hypothesis of rapid Norway rat colonization of South Atlantic Ocean islands by sea-faring European nations from multiple European ports of origin. This seems to have been the predominant pathway for repeated Norway rat invasions of islands, even within the same archipelago, rather than within-island dispersal across geographic barriers.

Ocean Data Interoperability Platform (ODIP): using regional data systems for global ocean research

Science.gov (United States)

Schaap, D.; Thijsse, P.; Glaves, H.

2017-12-01

Ocean acidification, loss of coral reefs, sustainable exploitation of the marine environment are just a few of the challenges researchers around the world are currently attempting to understand and address. However, studies of these ecosystem level challenges are impossible unless researchers can discover and re-use the large volumes of interoperable multidisciplinary data that are currently only accessible through regional and global data systems that serve discreet, and often discipline specific, user communities. The plethora of marine data systems currently in existence are also using different standards, technologies and best practices making re-use of the data problematic for those engaged in interdisciplinary marine research. The Ocean Data Interoperability Platform (ODIP) is responding to this growing demand for discoverable, accessible and reusable data by establishing the foundations for a common global framework for marine data management. But creation of such an infrastructure is a major undertaking, and one that needs to be achieved in part by establishing different levels of interoperability across existing regional and global marine e-infrastructures. Workshops organised by ODIP II facilitate dialogue between selected regional and global marine data systems in an effort to identify potential solutions that integrate these marine e-infrastructures. The outcomes of these discussions have formed the basis for a number of prototype development tasks that aim to demonstrate effective sharing of data across multiple data systems, and allow users to access data from more than one system through a single access point. The ODIP II project is currently developing four prototype solutions that are establishing interoperability between selected regional marine data management infrastructures in Europe, the USA, Canada and Australia, and with the global POGO, IODE Ocean Data Portal (ODP) and GEOSS systems. The potential impact of implementing these solutions for

77 FR 57559 - Endangered Species; File No. 13330

Science.gov (United States)

2012-09-18

... been granted under the authority of the Endangered Species Act of 1973, as amended (ESA; 16 U.S.C. 1531... endangered or threatened species, and (3) is consistent with the purposes and policies set forth in section 2... DEPARTMENT OF COMMERCE National Oceanic and Atmospheric Administration RIN 0648-XB144 Endangered...

76 FR 77780 - Endangered Species; File No. 10022

Science.gov (United States)

2011-12-14

... been granted under the authority of the Endangered Species Act of 1973, as amended (ESA; 16 U.S.C. 1531... endangered or threatened species, and (3) is consistent with the purposes and policies set forth in section 2... DEPARTMENT OF COMMERCE National Oceanic and Atmospheric Administration RIN 0648-XA867 Endangered...

Complex patterns of speciation in cosmopolitan "rock posy" lichens--discovering and delimiting cryptic fungal species in the lichen-forming Rhizoplaca melanophthalma species-complex (Lecanoraceae, Ascomycota).

Science.gov (United States)

Leavitt, Steven D; Fankhauser, Johnathon D; Leavitt, Dean H; Porter, Lyndon D; Johnson, Leigh A; St Clair, Larry L

2011-06-01

A growing body of evidence indicates that in some cases morphology-based species circumscription of lichenized fungi misrepresents the number of existing species. The cosmopolitan "rock posy" lichen (Rhizoplaca melanophthalma) species-complex includes a number of morphologically distinct species that are both geographically and ecologically widespread, providing a model system to evaluate speciation in lichen-forming ascomycetes. In this study, we assembled multiple lines of evidence from nuclear DNA sequence data, morphology, and biochemistry for species delimitation in the R. melanophthalma species-complex. We identify a total of ten candidate species in this study, four of which were previously recognized as distinct taxa and six previously unrecognized lineages found within what has been thus far considered a single species. Candidate species are supported using inferences from multiple empirical operational criteria. Multiple instances of sympatry support the view that these lineages merit recognition as distinct taxa. Generally, we found little corroboration between morphological and chemical characters, and previously unidentified lineages were morphologically polymorphic. However, secondary metabolite data supported one cryptic saxicolous lineage, characterized by orsellinic-derived gyrophoric and lecanoric acids, which we consider to be taxonomically significant. Our study of the R. melanophthalma species-complex indicates that the genus Rhizoplaca, as presently circumscribed, is more diverse in western North American than originally perceived, and we present our analyses as a working example of species delimitation in morphologically cryptic and recently diverged lichenized fungi. Copyright © 2011 Elsevier Inc. All rights reserved.

New species of Prolachesilla Mockford & Sullivan (Psocodea: 'Psocoptera': Lachesillidae: Graphocaeciliini) from Bolivia and Mexico.

Science.gov (United States)

Arango, Stephania Sandoval; Obando, Ranulfo González; Aldrete, Alfonso Neri García

2017-03-20

The genus Prolachesilla Mockford & Sullivan presently includes nine species, all described when the genus was erected; since then, no other species have been discovered. Here, we describe and illustrate one Bolivian and three Mexican species. This is the first record of Prolachesilla from Bolivia. A key to the species of the genus is included.

Biological review of 82 species of coral petitioned to be included in the Endangered Species Act

Science.gov (United States)

Brainard, Russell E.; Birkeland, Charles; Eakin, C. Mark; McElhany, Paul; Miller, Margaret W.; Patterson, Matt; Piniak, G.A.

2011-01-01

list 83 coral species as threatened or endangered under the U.S. Endangered Species Act. The petition was based on a predicted decline in available habitat for the species, citing anthropogenic climate change and ocean acidification as the lead factors among the various stressors responsible for the potential decline. The NMFS identified 82 of the corals as candidate species, finding that the petition provided substantive information for a potential listing of these species. The NMFS established a Biological Review Team (BRT) to prepare this Status Review Report that examines the status of these 82 candidate coral species and evaluates extinction risk for each of them. This document makes no recommendations for listing, as that is a separate evaluation to be conducted by the NMFS.

Rajella paucispinosa n. sp., a new deep-water skate (Elasmobranchii, Rajidae) from the western Indian Ocean off South Mozambique, and a revised generic diagnosis.

Science.gov (United States)

Weigmann, Simon; Stehmann, Matthias F W; Thiel, Ralf

2014-08-08

A new species of the widely in temperate and tropical latitudes distributed skate genus Rajella is described based on an almost adult male specimen from the western Indian Ocean off South Mozambique. The holotype of R. paucispinosa n. sp. was caught during cruise 17 of RV 'Vityaz' along the deep western Indian Ocean in 1988/89. It is the northernmost record of a Rajella specimen in the western Indian Ocean. The new species is the 18th valid species of the genus and the fifth species in the western Indian Ocean. It differs from its congeners in the small maximal total length of about 50 cm and only few thorns on the dorsal surface. The new species has only two thorns on each orbit, one nuchal thorn, one right scapular thorn (left one not detectable, abraded), and one median row of tail thorns. Other species of Rajella typically have half rings of thorns on orbital rims, a triangle of thorns on nape-shoulder region, and at least three rows of tail thorns. Another conspicuous feature of the new species is the almost completely white dorsal and ventral coloration. 

Allopatric origin of cryptic butterfly species that were discovered feeding on distinct host plants in sympatry.

NARCIS (Netherlands)

McBride, L.C.; Velzen, van R.; Larsen, T.B.

2009-01-01

Surveys of tropical insects are increasingly uncovering cryptic species ¿ morphologically similar yet reproductively isolated taxa once thought to comprise a single interbreeding entity. The vast majority of such species are described from a single location. This leaves us with little information on

GraphTeams: a method for discovering spatial gene clusters in Hi-C sequencing data.

Science.gov (United States)

Schulz, Tizian; Stoye, Jens; Doerr, Daniel

2018-05-08

Hi-C sequencing offers novel, cost-effective means to study the spatial conformation of chromosomes. We use data obtained from Hi-C experiments to provide new evidence for the existence of spatial gene clusters. These are sets of genes with associated functionality that exhibit close proximity to each other in the spatial conformation of chromosomes across several related species. We present the first gene cluster model capable of handling spatial data. Our model generalizes a popular computational model for gene cluster prediction, called δ-teams, from sequences to graphs. Following previous lines of research, we subsequently extend our model to allow for several vertices being associated with the same label. The model, called δ-teams with families, is particular suitable for our application as it enables handling of gene duplicates. We develop algorithmic solutions for both models. We implemented the algorithm for discovering δ-teams with families and integrated it into a fully automated workflow for discovering gene clusters in Hi-C data, called GraphTeams. We applied it to human and mouse data to find intra- and interchromosomal gene cluster candidates. The results include intrachromosomal clusters that seem to exhibit a closer proximity in space than on their chromosomal DNA sequence. We further discovered interchromosomal gene clusters that contain genes from different chromosomes within the human genome, but are located on a single chromosome in mouse. By identifying δ-teams with families, we provide a flexible model to discover gene cluster candidates in Hi-C data. Our analysis of Hi-C data from human and mouse reveals several known gene clusters (thus validating our approach), but also few sparsely studied or possibly unknown gene cluster candidates that could be the source of further experimental investigations.

Genomic DNA Enrichment Using Sequence Capture Microarrays: a Novel Approach to Discover Sequence Nucleotide Polymorphisms (SNP) in Brassica napus L

Science.gov (United States)

Clarke, Wayne E.; Parkin, Isobel A.; Gajardo, Humberto A.; Gerhardt, Daniel J.; Higgins, Erin; Sidebottom, Christine; Sharpe, Andrew G.; Snowdon, Rod J.; Federico, Maria L.; Iniguez-Luy, Federico L.

2013-01-01

Targeted genomic selection methodologies, or sequence capture, allow for DNA enrichment and large-scale resequencing and characterization of natural genetic variation in species with complex genomes, such as rapeseed canola (Brassica napus L., AACC, 2n=38). The main goal of this project was to combine sequence capture with next generation sequencing (NGS) to discover single nucleotide polymorphisms (SNPs) in specific areas of the B. napus genome historically associated (via quantitative trait loci –QTL– analysis) to traits of agronomical and nutritional importance. A 2.1 million feature sequence capture platform was designed to interrogate DNA sequence variation across 47 specific genomic regions, representing 51.2 Mb of the Brassica A and C genomes, in ten diverse rapeseed genotypes. All ten genotypes were sequenced using the 454 Life Sciences chemistry and to assess the effect of increased sequence depth, two genotypes were also sequenced using Illumina HiSeq chemistry. As a result, 589,367 potentially useful SNPs were identified. Analysis of sequence coverage indicated a four-fold increased representation of target regions, with 57% of the filtered SNPs falling within these regions. Sixty percent of discovered SNPs corresponded to transitions while 40% were transversions. Interestingly, fifty eight percent of the SNPs were found in genic regions while 42% were found in intergenic regions. Further, a high percentage of genic SNPs was found in exons (65% and 64% for the A and C genomes, respectively). Two different genotyping assays were used to validate the discovered SNPs. Validation rates ranged from 61.5% to 84% of tested SNPs, underpinning the effectiveness of this SNP discovery approach. Most importantly, the discovered SNPs were associated with agronomically important regions of the B. napus genome generating a novel data resource for research and breeding this crop species. PMID:24312619

Breeding sites and species association of the main Bluetongue and Schmallenberg virus vectors, the Culicoides species (Diptera: Ceratopogonidae), in northern Europe

OpenAIRE

Zimmer, Jean-Yves; Losson, Bertrand; Saegerman, Claude; Haubruge, Eric; Francis, Frédéric

2013-01-01

Several species of Culicoides (Diptera: Ceratopogonidae) biting midges are biological vectors of bluetongue virus (BTV) and, as recently discovered, Schmallenberg virus (SBV) in northern Europe. Since their recent emergence in this part of the continent, these diseases that affect domestic and wild ruminants have caused considerable economic losses to the sheep and cattle industries. The substrates that are suitable for larval development of the main vector species are still relatively unknow...

76 FR 66042 - Endangered Species; File No. 1551

Science.gov (United States)

2011-10-25

... granted under the authority of the Endangered Species Act of 1973, as amended (ESA; 16 U.S.C. 1531 et seq... endangered or threatened species, and (3) is consistent with the purposes and policies set forth in section 2... DEPARTMENT OF COMMERCE National Oceanic and Atmospheric Administration RIN 0648-XA785 Endangered...

Millennial-scale isotope records from a wide-ranging predator show evidence of recent human impact to oceanic food webs

DEFF Research Database (Denmark)

Wiley, A.E.; Ostrom, P.H.; Welch, A.J.

2013-01-01

Human exploitation of marine ecosystems is more recent in oceanic than near shore regions, yet our understanding of human impacts on oceanic food webs is comparatively poor. Few records of species that live beyond the continental shelves date back more than 60 y, and the sheer size of oceanic reg...

Five new species of jawfishes (Opistognathus: Opistognathidae) from the western Atlantic Ocean

Science.gov (United States)

Smith-Vaniz, W.F.

1997-01-01

Synonymies, diagnoses, descriptions, illustrations, and spot distribution maps are given for ten species of Opistognathus, including all western Atlantic species that have a cirrus on their anterior nostrils. Three deep-water species lacking nasal cirri are also treated, including O. leprocarus n. sp. (Bahamas and Lesser Antilles), O. melachasme (Yucatan), and O. nothus n. sp. (North Carolina, Gulf of Mexico and Cuba); the latter two species were originally thought to represent different sexes of the same species. The O. macrognathus species group is diagnosed primarily by having sexually dimorphic jaws and sexually dichromatic maxillary markings, and includes the eastern Pacific O. scops and the following five western Atlantic species: O. macrognathus (Florida, Gulf of Mexico, and Bahamas to northern South America), O. brasiliensis n. sp. (southern Brazil), O. cuverii (southern Brazil), O. robinsi n. sp. (South Carolina, Florida, Bahamas, and Gulf of Mexico), and O. signatus n. sp. (Nicaragua, Panama, and northern South America). Opistognathus robinsi and O. signatus are very similar morphologically and here recognized as allopatric sister-species but the possibility exists that their disjunct continental distributions may be a collecting artifact. The broadly distributed and shallow-water species Opistognathus whitehurstii and O. maxillosus are superficially similar to some members of the O. macrognathus species group, including having cirri on their anterior nostrils, but differ most obviously in having non-sexually dimorphic jaws and more numerous cephalic sensory pores. An identification key is provided for all known western Atlantic species of Opistognathus.

Was ocean acidification responsible for history's greatest extinction?

Science.gov (United States)

Schultz, Colin

2011-11-01

Two hundred fifty million years ago, the world suffered the greatest recorded extinction of all time. More than 90% of marine animals and a majority of terrestrial species disappeared, yet the cause of the Permian-Triassic boundary (PTB) dieoff remains unknown. Various theories abound, with most focusing on rampant Siberian volcanism and its potential consequences: global warming, carbon dioxide poisoning, ocean acidification, or the severe drawdown of oceanic dissolved oxygen levels, also known as anoxia. To narrow the range of possible causes, Montenegro et al. ran climate simulations for PTB using the University of Victoria Earth System Climate Model, a carbon cycle-climate coupled general circulation model.

NSF Workshop Report: Discovering General Principles of Nervous System Organization by Comparing Brain Maps across Species

Science.gov (United States)

Striedter, Georg F.; Belgard, T. Grant; Chen, Chun-Chun; Davis, Fred P.; Finlay, Barbara L.; Güntürkün, Onur; Hale, Melina E.; Harris, Julie A.; Hecht, Erin E.; Hof, Patrick R.; Hofmann, Hans A.; Holland, Linda Z.; Iwaniuk, Andrew N.; Jarvis, Erich D.; Karten, Harvey J.; Katz, Paul S.; Kristan, William B.; Macagno, Eduardo R.; Mitra, Partha P.; Moroz, Leonid L.; Preuss, Todd M.; Ragsdale, Clifton W.; Sherwood, Chet C.; Stevens, Charles F.; Stüttgen, Maik C.; Tsumoto, Tadaharu; Wilczynski, Walter

2014-01-01

Efforts to understand nervous system structure and function have received new impetus from the federal Brain Research through Advancing Innovative Neurotechnologies (BRAIN) Initiative. Comparative analyses can contribute to this effort by leading to the discovery of general principles of neural circuit design, information processing, and gene-structure-function relationships that are not apparent from studies on single species. We here propose to extend the comparative approach to nervous system ‘maps’ comprising molecular, anatomical, and physiological data. This research will identify which neural features are likely to generalize across species, and which are unlikely to be broadly conserved. It will also suggest causal relationships between genes, development, adult anatomy, physiology, and, ultimately, behavior. These causal hypotheses can then be tested experimentally. Finally, insights from comparative research can inspire and guide technological development. To promote this research agenda, we recommend that teams of investigators coalesce around specific research questions and select a set of ‘reference species’ to anchor their comparative analyses. These reference species should be chosen not just for practical advantages, but also with regard for their phylogenetic position, behavioral repertoire, well-annotated genome, or other strategic reasons. We envision that the nervous systems of these reference species will be mapped in more detail than those of other species. The collected data may range from the molecular to the behavioral, depending on the research question. To integrate across levels of analysis and across species, standards for data collection, annotation, archiving, and distribution must be developed and respected. To that end, it will help to form networks or consortia of researchers and centers for science, technology, and education that focus on organized data collection, distribution, and training. These activities could be

Identification and diversity of Fusarium species isolated from tomato fruits

Directory of Open Access Journals (Sweden)

Murad Nur Baiti Abd

2016-07-01

Full Text Available Fruit rot of tomato is a serious disease caused by Fusarium species. Sampling was conducted throughout Selangor, Malaysia and fungal species identification was conducted based on morphological and gene encoding translation elongation factor 1-α (tef1-α sequence analysis. Five species of Fusarium were discovered namely F. oxysporum (including F. oxysporum f. sp. lycopersici, F. solani, F. equiseti, F. proliferatum and F. verticillioides. Our results provide additional information regarding the diversity of Fusarium species associated with fruit rot disease of tomato.

Uncloaking a cryptic, threatened rail with molecular markers: origins, connectivity and demography of a recently-discovered population

Science.gov (United States)

Girard, Philippe; Takekawa, John Y.; Beissinger, Steven R.

2010-01-01

The threatened California Black Rail lives under dense marsh vegetation, is rarely observed, flies weakly and has a highly disjunct distribution. The largest population of rails is found in 8–10 large wetlands in San Francisco Bay (SF Bay), but a population was recently discovered in the foothills of the Sierra Nevada Mountains (Foothills), within a wetland network comprised of over 200 small marshes. Using microsatellite and mitochondrial analyses, our objectives were to determine the origins, connectivity and demography of this recently-discovered population. Analyses of individuals from the Foothills (n = 31), SF Bay (n = 31), the Imperial Valley (n = 6) and the East Coast (n = 3), combined with rigorous power evaluations, provided valuable insights into past history and current dynamics of the species in Northern California that challenge conventional wisdom about the species. The Foothills and SF Bay populations have diverged strongly from the Imperial Valley population, even more strongly than from individuals of the East Coast subspecies. The data also suggest a historical presence of the species in the Foothills. The SF Bay and Foothills populations had similar estimated effective population size over the areas sampled and appeared linked by a strongly asymmetrical migration pattern, with a greater probability of movement from the Foothills to SF Bay than vice versa. Random mating was inferred in the Foothills, but local substructure among marshes and inbreeding were detected in SF Bay, suggesting different dispersal patterns within each location. The unexpected dimensions of Black Rail demography and population structure suggested by these analyses and their potential importance for management are discussed.

Invasive species: Ocean ecosystem case studies for earth systems and environmental sciences

Science.gov (United States)

Schofield, Pam; Brown, Mary E.

2016-01-01

Marine species are increasingly transferred from areas where they are native to areas where they are not. Some nonnative species become invasive, causing undesirable impacts to environment, economy and/or human health. Nonnative marine species can be introduced through a variety of vectors, including shipping, trade, inland corridors (such as canals), and others. Effects of invasive marine species can be dramatic and irreversible. Case studies of four nonnative marine species are given (green crab, comb jelly, lionfish and Caulerpa algae).

Modern and ancient geochemical constraints on Proterozoic atmosphere-ocean redox evolution

Science.gov (United States)

Hardisty, D. S.; Horner, T. J.; Wankel, S. D.; Lu, Z.; Lyons, T.; Nielsen, S.

2017-12-01

A detailed understanding of the spatiotemporal oxygenation of Earth's atmosphere-ocean system through the Precambrian has important implications for the environments capable of sustaining early eukaryotic life and the evolving oxidant budget of subducted sediments. Proxy records suggest an anoxic Fe-rich deep ocean through much of the Precambrian and atmospheric and surface-ocean oxygenation that started in earnest at the Paleoproterozoic Great Oxidation Event (GOE). The marine photic zone represented the initial site of oxygen production and accumulation via cyanobacteria, yet our understanding of surface-ocean oxygen contents and the extent and timing of oxygen propagation and exchange between the atmosphere and deeper ocean are limited. Here, we present an updated perspective of the constraints on atmospheric, surface-ocean, and deep-ocean oxygen contents starting at the GOE. Our research uses the iodine content of Proterozoic carbonates as a tracer of dissolved iodate in the shallow ocean, a redox-sensitive species quantitatively reduced in modern oxygen minimum zones. We supplement our understanding of the ancient record with novel experiments examining the rates of iodate production from oxygenated marine environments based on seawater incubations. Combining new data from iodine with published shallow marine (Ce anomaly, N isotopes) and atmospheric redox proxies, we provide an integrated view of the vertical redox structure of the atmosphere and ocean across the Proterozoic.

A new bee species that excavates sandstone nests

Science.gov (United States)

Many wonder why animals act in seemingly injurious ways. Understanding the behavior of pollinators such as bees is especially important because of the necessary ecosystem service they provide. The new species Anthophora pueblo, discovered excavating sandstone nests, provides a model system for addre...

Pteropods in Southern Ocean ecosystems

Science.gov (United States)

Hunt, B. P. V.; Pakhomov, E. A.; Hosie, G. W.; Siegel, V.; Ward, P.; Bernard, K.

2008-09-01

To date, little research has been carried out on pelagic gastropod molluscs (pteropods) in Southern Ocean ecosystems. However, recent predictions are that, due to acidification resulting from a business as usual approach to CO 2 emissions (IS92a), Southern Ocean surface waters may begin to become uninhabitable for aragonite shelled thecosome pteropods by 2050. To gain insight into the potential impact that this would have on Southern Ocean ecosystems, we have here synthesized available data on pteropod distributions and densities, assessed current knowledge of pteropod ecology, and highlighted knowledge gaps and directions for future research on this zooplankton group. Six species of pteropod are typical of the Southern Ocean south of the Sub-Tropical Convergence, including the four Thecosomes Limacina helicina antarctica, Limacina retroversa australis, Clio pyramidata, and Clio piatkowskii, and two Gymnosomes Clione limacina antarctica and Spongiobranchaea australis. Limacina retroversa australis dominated pteropod densities north of the Polar Front (PF), averaging 60 ind m -3 (max = 800 ind m -3) and 11% of total zooplankton at the Prince Edward Islands. South of the PF L. helicina antarctica predominated, averaging 165 ind m -3 (max = 2681 ind m -3) and up to >35% of total zooplankton at South Georgia, and up to 1397 ind m -3 and 63% of total zooplankton in the Ross Sea. Combined pteropods contributed 40% of community grazing impact. Further research is required to quantify diet selectivity, the effect of phytoplankton composition on growth and reproductive success, and the role of carnivory in thecosomes. Life histories are a significant knowledge gap for Southern Ocean pteropods, a single study having been completed for L. retroversa australis, making population studies a priority for this group. Pteropods appear to be important in biogeochemical cycling, thecosome shells contributing >50% to carbonate flux in the deep ocean south of the PF. Pteropods may also

AFSC/ABL: Juvenile rockfish DNA species identification

Data.gov (United States)

National Oceanic and Atmospheric Administration, Department of Commerce — Many pelagic juvenile rockfish (Sebastes) were collected in juvenile salmonid surveys in the Gulf of Alaska (GOA) from 1998 to 2002. Often species identification of...

Biogeochemical Reactions Under Simulated Europa Ocean Conditions

Science.gov (United States)

Amashukeli, X.; Connon, S. A.; Gleeson, D. F.; Kowalczyk, R. S.; Pappalardo, R. T.

2007-12-01

Galileo data have demonstrated the probable presence of a liquid water ocean on Europa, and existence of salts and carbon dioxide in the satellite's surface ice (e.g., Carr et al., 1998; McCord et al., 1999, Pappalardo et al., 1999; Kivelson et al., 2000). Subsequently, the discovery of chemical signatures of extinct or extant life in Europa's ocean and on its surface became a distinct possibility. Moreover, understanding of Europa's potential habitability is now one of the major goals of the Europa Orbiter Flagship mission. It is likely, that in the early stages of Europa's ocean formation, moderately alkaline oceanic sulfate-carbonate species and a magnetite-silicate mantel could have participated in low-temperature biogeochemical sulfur, iron and carbon cycles facilitated by primitive organisms (Zolotov and Shock, 2004). If periodic supplies of fresh rock and sulfate-carbonate ions are available in Europa's ocean, then an exciting prospect exists that life may be present in Europa's ocean today. In our laboratory, we began the study of the plausible biogeochemical reactions under conditions appropriate to Europa's ocean using barophilic psychrophilic organisms that thrive under anaerobic conditions. In the near absence of abiotic synthetic pathways due to low Europa's temperatures, the biotic synthesis may present a viable opportunity for the formation of the organic and inorganic compounds under these extreme conditions. This work is independent of assumptions regarding hydrothermal vents at Europa's ocean floor or surface-derived oxidant sources. For our studies, we have fabricated a high-pressure (5,000 psi) reaction vessel that simulates aqueous conditions on Europa. We were also successful at reviving barophilic psychrophilic strains of Shewanella bacterium, which serve as test organisms in this investigation. Currently, facultative barophilic psychrophilic stains of Shewanella are grown in the presence of ferric food source; the strains exhibiting iron

Is plate tectonics needed to evolve technological species on exoplanets?

Directory of Open Access Journals (Sweden)

Robert J. Stern

2016-07-01

Full Text Available As we continue searching for exoplanets, we wonder if life and technological species capable of communicating with us exists on any of them. As geoscientists, we can also wonder how important is the presence or absence of plate tectonics for the evolution of technological species. This essay considers this question, focusing on tectonically active rocky (silicate planets, like Earth, Venus, and Mars. The development of technological species on Earth provides key insights for understanding evolution on exoplanets, including the likely role that plate tectonics may play. An Earth-sized silicate planet is likely to experience several tectonic styles over its lifetime, as it cools and its lithosphere thickens, strengthens, and becomes denser. These include magma ocean, various styles of stagnant lid, and perhaps plate tectonics. Abundant liquid water favors both life and plate tectonics. Ocean is required for early evolution of diverse single-celled organisms, then colonies of cells which specialized further to form guts, appendages, and sensory organisms up to the complexity of fish (central nervous system, appendages, eyes. Large expanses of dry land also begin in the ocean, today produced above subduction zones in juvenile arcs and by their coalescence to form continents, although it is not clear that plate tectonics was required to create continental crust on Earth. Dry land of continents is required for further evolution of technological species, where modification of appendages for grasping and manipulating, and improvement of eyes and central nervous system could be perfected. These bioassets allowed intelligent creatures to examine the night sky and wonder, the beginning of abstract thinking, including religion and science. Technology arises from the exigencies of daily living such as tool-making, agriculture, clothing, and weapons, but the pace of innovation accelerates once it is allied with science. Finally, the importance of plate

The importance of novel and agricultural habitats for the avifauna of an oceanic island

DEFF Research Database (Denmark)

Dallimer, Martin; Parnell, Mark; Bicknell, Jake E.

2012-01-01

Conservation management can no longer rely on protecting pristine habitats, but must consider the wider landscape. This is especially true on oceanic islands where endemic species are believed to be particularly susceptible to the extinction risks that accompany land conversion. Despite this......, there is a paucity of studies examining how endemic communities on oceanic islands may be distributed across such human-modified habitats. Taking Principe Island in West Africa as a case study, we investigate how avian communities vary across the habitats (primary forest, secondary forest, agricultural areas......, more diverse and held higher overall abundances of birds than those within primary forest. This was true for both the entire avian assemblage and the endemic species alone. Nevertheless, two IUCN-listed species were restricted to primary forest, and many other endemics occurred at higher densities...

Late Cretaceous seasonal ocean variability from the Arctic.

Science.gov (United States)

Davies, Andrew; Kemp, Alan E S; Pike, Jennifer

2009-07-09

The modern Arctic Ocean is regarded as a barometer of global change and amplifier of global warming and therefore records of past Arctic change are critical for palaeoclimate reconstruction. Little is known of the state of the Arctic Ocean in the greenhouse period of the Late Cretaceous epoch (65-99 million years ago), yet records from such times may yield important clues to Arctic Ocean behaviour in near-future warmer climates. Here we present a seasonally resolved Cretaceous sedimentary record from the Alpha ridge of the Arctic Ocean. This palaeo-sediment trap provides new insight into the workings of the Cretaceous marine biological carbon pump. Seasonal primary production was dominated by diatom algae but was not related to upwelling as was previously hypothesized. Rather, production occurred within a stratified water column, involving specially adapted species in blooms resembling those of the modern North Pacific subtropical gyre, or those indicated for the Mediterranean sapropels. With increased CO(2) levels and warming currently driving increased stratification in the global ocean, this style of production that is adapted to stratification may become more widespread. Our evidence for seasonal diatom production and flux testify to an ice-free summer, but thin accumulations of terrigenous sediment within the diatom ooze are consistent with the presence of intermittent sea ice in the winter, supporting a wide body of evidence for low temperatures in the Late Cretaceous Arctic Ocean, rather than recent suggestions of a 15 degrees C mean annual temperature at this time.

Ocean control of the breeding regime of the sooty tern in the southwest Indian Ocean

Science.gov (United States)

Jaquemet, S.; Le Corre, M.; Quartly, G. D.

2007-01-01

Food availability, which is often seasonal, is regarded as a key factor in the breeding success of seabirds. In oceanic tropical areas, the resources are mostly patchy and ephemeral at the surface, and the seasonality is less marked than at higher latitudes. Such a situation influences greatly the breeding strategies of the oceanic seabird species. We conducted a comparative study of the breeding phenology of the sooty tern ( Sterna fuscata) in relation to the local and regional oceanographic conditions around the four major colonies (Europa, Juan de Nova, Lys and Bird Islands) of the southwest Indian Ocean. Over the 1997-2003 period, around all the studied locations, the sea-surface temperature (SST) and the chlorophyll concentration in the Mozambique Channel and the Seychelles area showed clear seasonal differences related to the southern climate and the monsoon phenomena. The breeding activity is synchronized at each studied colony, but the timings are very different. Seasonal reproduction occurs in austral winter at Europa and Bird Island and in austral summer at Juan de Nova; at Lys Island the reproduction is non-seasonal. For the seasonal colonies, there is a large monthly change in SST just before the beginning of reproduction, which is a proxy indicating the annual phytoplankton bloom. This variation is accompanied by the development of oceanic features such as fronts that favour aggregation of prey, and may also play an important role in the presence of schools of surface tuna, which are very important for the foraging success of sooty terns. Conversely, around Lys Island the seasonal variations of the marine environment do not lead to pronounced development of oceanic structures, and consequently, the longer-lasting phytoplankton bloom could explain the non-seasonal breeding regime there. Further studies will help discern the advantages and disadvantages of seasonal and non-seasonal reproduction regime in response to unpredictable fluctuations of the

Diet Composition and Trophic Ecology of Northeast Pacific Ocean Sharks.

Science.gov (United States)

Bizzarro, Joseph J; Carlisle, Aaron B; Smith, Wade D; Cortés, Enric

Although there is a general perception of sharks as large pelagic, apex predators, most sharks are smaller, meso- and upper-trophic level predators that are associated with the seafloor. Among 73 shark species documented in the eastern North Pacific (ENP), less than half reach maximum lengths >200cm, and 78% occur in demersal or benthic regions of the continental shelf or slope. Most small (≤200cm) species (e.g., houndsharks) and demersal, nearshore juveniles of larger species (e.g., requiem sharks) consume small teleosts and decapod crustaceans, whereas large species in pelagic coastal and oceanic environments feed on large teleosts and squids. Several large, pelagic apex predator species occur in the ENP, but the largest species (i.e., Basking Shark, Whale Shark) consume zooplankton or small nekton. Size-based dietary variability is substantial for many species, and segregation of juvenile and adult foraging habitats also is common (e.g., Horn Shark, Shortfin Mako). Temporal dietary differences are most pronounced for temperate, nearshore species with wide size ranges, and least pronounced for smaller species in extreme latitudes and deep-water regions. Sympatric sharks often occupy various trophic positions, with resource overlap differing by space and time and some sharks serving as prey to other species. Most coastal species remain in the same general region over time and feed opportunistically on variable prey inputs (e.g., season migrations, spawning, or recruitment events), whereas pelagic, oceanic species actively seek hot spots of prey abundance that are spatiotemporally variable. The influence of sharks on ecosystem structure and regulation has been downplayed compared to that of large teleosts species with higher per capita consumption rates (e.g., tunas, billfishes). However, sharks also exert indirect influences on prey populations by causing behavioural changes that may result in restricted ranges and reduced fitness. Except for food web modelling

Changes in Ocean Circulation with an Ice-Free Arctic: Reconstructing Early Holocene Arctic Ocean Circulation Using Geochemical Signals from Individual Neogloboquadrina pachyderma (sinistral) Shells

Science.gov (United States)

Livsey, C.; Spero, H. J.; Kozdon, R.

2016-12-01

The impacts of sea ice decrease and consequent hydrologic changes in the Arctic Ocean will be experienced globally as ocean and atmospheric temperatures continue to rise, though it is not evident to what extent. Understanding the structure of the Arctic water column during the early/mid Holocene sea ice minimum ( 6-10 kya), a post-glacial analogue of a seasonally ice-free Arctic, will help us to predict what the changes we can expect as the Earth warms over the next century. Neogloboquadrina pachyderma (sinistral; Nps) is a species of planktonic foraminifera that dominates assemblages in the polar oceans. This species grows its chambers (ontogenetic calcite) in the surface waters and subsequently descends through the water column to below the mixed layer where it quickly adds a thick crust of calcite (Kohfeld et al., 1996). Therefore, geochemical signals from both the surface waters and sub-mixed layer depths are captured within single Nps shells. We were able to target ion mass spectrometry (SIMS), therefore capturing signals from both the ontogenetic and crust calcite in single Nps shells. This data was combined with laser ablation- inductively coupled mass spectrometry (LA-ICPMS) Mg/Ca profiles of trace metals through the two layers of calcite of the same shells, to determine the thermal structure of the water column. Combining δ18O, temperature, and salinity gradients from locations across the Arctic basin allow us to reconstruct the hydrography of the early Holocene Arctic sea ice minimum. These results will be compared with modern Arctic water column characteristics in order to develop a conceptual model of Arctic Ocean oceanographic change due to global warming. Kohfeld, K.E., Fairbanks, R.G., Smith, S.L., Walsh, I.D., 1996. Neogloboquadrina pachyderma(sinistral coiling) as paleoceanographic tracers in polar oceans: Evidence from northeast water polynya plankton tows, sediment traps, and surface sediments. Paleoceanography 11, 679-699.

Multistressor impacts of warming and acidification of the ocean on marine invertebrates' life histories.

Science.gov (United States)

Byrne, Maria; Przeslawski, Rachel

2013-10-01

Benthic marine invertebrates live in a multistressor world where stressor levels are, and will continue to be, exacerbated by global warming and increased atmospheric carbon dioxide. These changes are causing the oceans to warm, decrease in pH, become hypercapnic, and to become less saturated in carbonate minerals. These stressors have strong impacts on biological processes, but little is known about their combined effects on the development of marine invertebrates. Increasing temperature has a stimulatory effect on development, whereas hypercapnia can depress developmental processes. The pH, pCO2, and CaCO3 of seawater change simultaneously with temperature, challenging our ability to predict future outcomes for marine biota. The need to consider both warming and acidification is reflected in the recent increase in cross-factorial studies of the effects of these stressors on development of marine invertebrates. The outcomes and trends in these studies are synthesized here. Based on this compilation, significant additive or antagonistic effects of warming and acidification of the ocean are common (16 of 20 species studied), and synergistic negative effects also are reported. Fertilization can be robust to near-future warming and acidification, depending on the male-female mating pair. Although larvae and juveniles of some species tolerate near-future levels of warming and acidification (+2°C/pH 7.8), projected far-future conditions (ca. ≥4°C/ ≤pH 7.6) are widely deleterious, with a reduction in the size and survival of larvae. It appears that larvae that calcify are sensitive both to warming and acidification, whereas those that do not calcify are more sensitive to warming. Different sensitivities of life-history stages and species have implications for persistence and community function in a changing ocean. Some species are more resilient than others and may be potential "winners" in the climate-change stakes. As the ocean will change more gradually over

Chitons (Mollusca: Polyplacophora) from the Seychelles with description of a new species

NARCIS (Netherlands)

Kaast, P.

1996-01-01

Notes are given on nine chiton species, collected mainly during the 'Oceanic Reefs' Expedition to the Seychelles (1992-1993), with some biogeographical observations. Ischnochiton goudi (family Ischnochitonidae) is described as a new species.

Four newly recorded species with a note on insect fauna from the Dokdo Islands, Korea

Directory of Open Access Journals (Sweden)

Do-Un Hwang

2017-12-01

Full Text Available Dokdo is a group of Korean oceanic islands located in the East Sea along with the island of Ulleungdo. It is of geological and biological interest due to oceanic islands that were formed earlier than other volcanic islands in the region, such as Jejudo and Ulleungdo. To date, the 156 species found on Dokdo have been classified into 75 families within 10 orders (with the exception of Entomobryomorpha and unidentified species. In this study, we report the discovery of four insect species unrecorded in the Dokdo Islands, thereby taking the total insect fauna of these islands to 160 species in 76 families within 10 orders. Keywords: Dokdo, insect fauna, unrecorded species of Dokdo

Ocean acidification has little effect on developmental thermal windows of echinoderms from Antarctica to the tropics.

Science.gov (United States)

Karelitz, Sam E; Uthicke, Sven; Foo, Shawna A; Barker, Mike F; Byrne, Maria; Pecorino, Danilo; Lamare, Miles D

2017-02-01

As the ocean warms, thermal tolerance of developmental stages may be a key driver of changes in the geographical distributions and abundance of marine invertebrates. Additional stressors such as ocean acidification may influence developmental thermal windows and are therefore important considerations for predicting distributions of species under climate change scenarios. The effects of reduced seawater pH on the thermal windows of fertilization, embryology and larval morphology were examined using five echinoderm species: two polar (Sterechinus neumayeri and Odontaster validus), two temperate (Fellaster zelandiae and Patiriella regularis) and one tropical (Arachnoides placenta). Responses were examined across 12-13 temperatures ranging from -1.1 °C to 5.7 °C (S. neumayeri), -0.5 °C to 10.7 °C (O. validus), 5.8 °C to 27 °C (F. zelandiae), 6.0 °C to 27.1 °C (P. regularis) and 13.9 °C to 34.8 °C (A. placenta) under present-day and near-future (2100+) ocean acidification conditions (-0.3 pH units) and for three important early developmental stages 1) fertilization, 2) embryo (prehatching) and 3) larval development. Thermal windows for fertilization were broad and were not influenced by a pH decrease. Embryological development was less thermotolerant. For O. validus, P. regularis and A. placenta, low pH reduced normal development, albeit with no effect on thermal windows. Larval development in all five species was affected by both temperature and pH; however, thermal tolerance was not reduced by pH. Results of this study suggest that in terms of fertilization and development, temperature will remain as the most important factor influencing species' latitudinal distributions as the ocean continues to warm and decrease in pH, and that there is little evidence of a synergistic effect of temperature and ocean acidification on the thermal control of species ranges. © 2016 John Wiley & Sons Ltd.

Ocean acidification impact on copepod swimming and mating behavior: consequences for population dynamics

Science.gov (United States)

Seuront, L.

2010-12-01

There is now ample evidence that ocean acidification caused by the uptake of additional carbon dioxide from the atmosphere at the ocean surface will severely impact on marine ecosystem structure and function. To date, most research effort has focused on the impact of ocean acidification on calcifying marine organisms. These include the dissolution of calcifying plankton, reduced growth and shell thickness in gastropods and echinoderms and declining growth of reef-building corals. The effects of increasing the partial pressure in carbon dioxide and decreasing carbonate concentrations on various aspects of phytoplankton biology and ecology have received some attention. It has also recently been shown that the ability of fish larvae to discriminate between the olfactory cues of different habitat types at settlement and to detect predator olfactory cues are impaired at the level of ocean acidification predicted to occur around 2100 on a business-as-usual scenario of CO2 emissions. Average ocean pH has decreased by 0.1 units since the pre-industrial times, and it is predicted to decline another 0.3-0.4 units by 2100, which nearly corresponds to a doubling PCO2. In addition, some locations are expected to exhibit an even greater than predicted rate of decline. In this context, understanding the direct and indirect links between ocean acidification and the mortality of marine species is critical, especially for minute planktonic organisms such as copepods at the base of the ocean food chains. In this context, this work tested if ocean acidification could affect copepod swimming behavior, and subsequently affect, and ultimately disrupt, the ability of male copepods to detect and follow the pheromone plume produced by conspecific females. To ensure the generality and the ecological relevance of the present work, the species used for the experimentation are two of the most common zooplankton species found in estuarine and coastal waters of the Northern Hemisphere, the

77 FR 31835 - Endangered and Threatened Species; Take of Anadromous Fish

Science.gov (United States)

2012-05-30

... DEPARTMENT OF COMMERCE National Oceanic and Atmospheric Administration RIN 0648-XC049 Endangered and Threatened Species; Take of Anadromous Fish AGENCY: National Marine Fisheries Service (NMFS..., 2012. Angela Somma, Chief, Endangered Species Division, Office of Protected Resources, National Marine...

76 FR 49735 - Endangered and Threatened Species; Take of Anadromous Fish

Science.gov (United States)

2011-08-11

... DEPARTMENT OF COMMERCE National Oceanic and Atmospheric Administration RIN 0648-XA631 Endangered and Threatened Species; Take of Anadromous Fish AGENCY: National Marine Fisheries Service (NMFS.... Therese Conant, Acting Chief, Endangered Species Division, Office of Protected Resources, National Marine...

Carnivorous sponges (Cladorhizidae) of the deep Weddell Sea, with descriptions of two new species

Science.gov (United States)

Dressler-Allame, Melina; Göcke, Christian; Kersken, Daniel; Plotkin, Alexander; Janussen, Dorte

2017-03-01

This paper presents 29 sponges of the family Cladorhizidae Dendy, 1922 sampled at 18 different stations in the Weddell Sea, Antarctic during two expeditions of RV Polarstern, PS61 ANT-XIX/2 ANDEEP 2 in 2002 and PS67 ANT-XXII/3 ANDEEP 3 in 2005. Fourteen species from four genera have been registered - one species of Asbestopluma Topsent, 1901, five species of Chondrocladia Thomson, 1873, three species of Cladorhiza Sars, 1872 and five species of Lycopodina Lundbeck, 1905. Six species are endemics of the Southern Ocean. Four species were previously only known from the areas north of the Antarctic and our records of them are thereby new for this region. Two species of Lycopodina, Lycopodina rhabdostylophora sp. nov. and Lycopodina pediculifera sp. nov., are new to science. Our study has considerably expanded the data on diversity of Cladorhizidae in the Southern Ocean. About 27 cladorhizid species (18-19% of global cladorhizid diversity) are now recorded for this region, of which 56% are endemics.

Measuring Ocean Literacy: What teens understand about the ocean using the Survey of Ocean Literacy and Engagement (SOLE)

Science.gov (United States)

Greely, T. M.; Lodge, A.

2009-12-01

Ocean issues with conceptual ties to science and global society have captured the attention, imagination, and concern of an international audience. Climate change, over fishing, marine pollution, freshwater shortages and alternative energy sources are a few ocean issues highlighted in our media and casual conversations. The ocean plays a role in our life in some way everyday, however, disconnect exists between what scientists know and the public understands about the ocean as revealed by numerous ocean and coastal literacy surveys. While the public exhibits emotive responses through care, concern and connection with the ocean, there remains a critical need for a baseline of ocean knowledge. However, knowledge about the ocean must be balanced with understanding about how to apply ocean information to daily decisions and actions. The present study analyzed underlying factors and patterns contributing to ocean literacy and reasoning within the context of an ocean education program, the Oceanography Camp for Girls. The OCG is designed to advance ocean conceptual understanding and decision making by engagement in a series of experiential learning and stewardship activities from authentic research settings in the field and lab. The present study measured a) what understanding teens currently hold about the ocean (content), b) how teens feel toward the ocean environment (environmental attitudes and morality), and c) how understanding and feelings are organized when reasoning about ocean socioscientific issues (e.g. climate change, over fishing, energy). The Survey of Ocean Literacy and Engagement (SOLE), was used to measure teens understanding about the ocean. SOLE is a 57-item survey instrument aligned with the Essential Principles and Fundamental Concepts of Ocean Literacy (NGS, 2007). Rasch analysis was used to refine and validate SOLE as a reasonable measure of ocean content knowledge (reliability, 0.91). Results revealed that content knowledge and environmental

Barcode of life: Advancing species identification and discovery

Digital Repository Service at National Institute of Oceanography (India)

Chandramohan, D.

-based identification systems and the dwindling pool of taxonomists highlight the need for alternate methods for species identification which should be quick, cost effective and efficient. DNA barcoding emerges as a most favoured alternate method by the researchers..., electronics and computer science. The mission of the CBOL is to develop DNA barcoding as a global standard in taxonomy, rapidly accelerate compiling of DNA barcodes of known and newly discovered plant and animal species, establish a public library...

75 FR 25205 - Endangered and Threatened Species; Take of Anadromous Fish

Science.gov (United States)

2010-05-07

... DEPARTMENT OF COMMERCE National Oceanic and Atmospheric Administration RIN 0648-XW33 Endangered and Threatened Species; Take of Anadromous Fish AGENCY: NOAA's National Marine Fisheries Service (NMFS... permit. Dated: May 4, 2010. Therese Conant, Acting Chief, Endangered Species Division, Office of...

Pollination, biogeography and phylogeny of oceanic island bellflowers (Campanulaceae)

DEFF Research Database (Denmark)

Olesen, Jens Mogens; Alarcón, M.; Ehlers, Bodil

2012-01-01

. These examples of vertebrate pollination evolved independently on each island or archipelago. We discuss if these pollination systems have an island or mainland origin and when they may have evolved, and finally, we attempt to reconstruct the pollinator-interaction history of each species.......We studied the pollination biology of nine island Campanulaceae species: Azorina vidalii, Musschia aurea, M. wollastonii, Canarina canariensis, Campanula jacobaea, Nesocodon mauritianus, and three species of Heterochaenia. In addition, we compared C. canariensis to its two African mainland...... relatives C. eminii and C. abyssinica. We asked to what extent related species converge in their floral biology and pollination in related habitats, i.e. oceanic islands. Study islands were the Azores, Madeira, Canary Islands, Cape Verde, Mauritius, and Réunion. Information about phylogenetic relationships...

Two new species of Chaetognatha from the Andaman Sea, Indian Ocean

Digital Repository Service at National Institute of Oceanography (India)

Nair, V.R.; Panampunnayil, S.U.; Pillai, H.U.K.; Gireesh, R.

fins and smaller size. S. meenakshiae has distinct characters, such as a small size, lower tail percentage, lower meristic counts and a difference in eye pigmentation as compared with three related species. The two new species appear to be endemic...

Comparative evaluation of sea-urchin larval stage sensitivity to ocean acidification.

Science.gov (United States)

Passarelli, M C; Cesar, A; Riba, I; DelValls, T A

2017-10-01

Changes in the marine carbonate system may affect various calcifying organisms. This study is aimed to compare the sensitivity of embryo-larval development of two species of sea urchins (Paracentrutos lividus and Lytechinus variegatus) collected and exposed to samples from different coastal zone (Spain and Brazil) to ocean acidification. The results showed that the larval stages are very sensitive to small changes in the seawater's pH. The larvae from P. lividus species showed to be more sensitive to acidified elutriate sediments than larvae from L. variegatus sea urchin. Furthermore, this study has demonstrated that the CO 2 enrichment in aquatic ecosystems cause changes on the mobility of the metals: Zn, Cu, Fe, Al and As, which was presented different behavior among them. Although an increase on the mobility of metals was found, the results using the principal component analysis showed that the pH reduction show the highest correlations with the toxicity and is the main cause of embryo-larval development inhibition. In this comparative study it is demonstrated that both species are able to assess potential effects of the ocean acidification related to CO 2 enrichment by both near future scenarios and the risk associated with CO 2 leakages in the Carbon Capture and Storage (CCS) process, and the importance of comparative studies in different zones to improve the understanding of the impacts caused by ocean acidification. Copyright © 2017 Elsevier Ltd. All rights reserved.

Ocean acidification research in the 'post-genomic' era: Roadmaps from the purple sea urchin Strongylocentrotus purpuratus.

Science.gov (United States)

Evans, Tyler G; Padilla-Gamiño, Jacqueline L; Kelly, Morgan W; Pespeni, Melissa H; Chan, Francis; Menge, Bruce A; Gaylord, Brian; Hill, Tessa M; Russell, Ann D; Palumbi, Stephen R; Sanford, Eric; Hofmann, Gretchen E

2015-07-01

Advances in nucleic acid sequencing technology are removing obstacles that historically prevented use of genomics within ocean change biology. As one of the first marine calcifiers to have its genome sequenced, purple sea urchins (Strongylocentrotus purpuratus) have been the subject of early research exploring genomic responses to ocean acidification, work that points to future experiments and illustrates the value of expanding genomic resources to other marine organisms in this new 'post-genomic' era. This review presents case studies of S. purpuratus demonstrating the ability of genomic experiments to address major knowledge gaps within ocean acidification. Ocean acidification research has focused largely on species vulnerability, and studies exploring mechanistic bases of tolerance toward low pH seawater are comparatively few. Transcriptomic responses to high pCO₂ seawater in a population of urchins already encountering low pH conditions have cast light on traits required for success in future oceans. Secondly, there is relatively little information on whether marine organisms possess the capacity to adapt to oceans progressively decreasing in pH. Genomics offers powerful methods to investigate evolutionary responses to ocean acidification and recent work in S. purpuratus has identified genes under selection in acidified seawater. Finally, relatively few ocean acidification experiments investigate how shifts in seawater pH combine with other environmental factors to influence organism performance. In S. purpuratus, transcriptomics has provided insight into physiological responses of urchins exposed simultaneously to warmer and more acidic seawater. Collectively, these data support that similar breakthroughs will occur as genomic resources are developed for other marine species. Copyright © 2015 Elsevier Inc. All rights reserved.

"The Oceans" not Withstanding: Scripps Geological-Geophysical Expeditions of the Golden Age

Science.gov (United States)

Fisher, R. L.

2002-12-01

"The Oceans: Their Physics, Chemistry, and General Biology," fully recognized and promoted the inherent unity of oceanography, the field itself, and of all components of the oceanic world. It covered well the wet pieces. However, except for sedimentary studies of the California borderland and reconnaissances of the Arctic, Mediterranean, and the South Atlantic, little was presented that could be parent to today's portrayals of marine geology and geophysics. The advances in those areas in the 1950's, 1960's, and early 1970's, by SIO scientists and those of several other institutions resulted from extended expeditionary studies, essential on-the-job field training of confident very young chief scientists, dogged pushing of traditional rough sampling methods to their limits, and the invention and lateral prompt application of precise electronic timing and sensing devices to shipboard observation of deep ocean seafloor/crustal elements. SIO's multifaceted expeditions of those years were conceived, planned and often lead by graduate students making thesis observations, assisted by their fellows as "warm bodies," perhaps with more senior staff scientists making specific collections at key localities. Education was real-time: discovering--reflection--discussion, and mutual tutoring. The principal factor that made such operation scientifically and educationally successful was SIO's then Director, Roger Revelle, a benevolent and trusting, but very perceptive, godfather.

Sex ratio of five species of pelagic copepods from Indian Ocean

Digital Repository Service at National Institute of Oceanography (India)

Saraswathy, M.; Santhakumari, V.

Sex ratio in five species from south and southeast coast of India varied remarkably. Five species were selected for the present investigation. Range in the percentage of males was from 8 to 121 in @iUndinula vulgaris@@ (Dana), 16-425 in @i...

Climate change in the sea: the implications of increasing the carbon dioxide inputs to the surface ocean

Energy Technology Data Exchange (ETDEWEB)

Pfister, Cathy [University of Chicago

2012-12-23

The oceans are estimated to be absorbing one-third of the fossil fuel carbon released into the atmosphere, a process that is expected to change ocean carbon chemistry. I will present data from the Washington coast showing ocean pH declines and changes to the shell chemistry of bivalves. I will discuss implications of carbon cycle changes for marine species, including insights from a coastal area where I have worked for more than 24 years. I will summarize what we know to date about this process of “ocean acidification”.

Evaluation of two novel barcodes for species recognition of opportunistic pathogens in Fusarium.

Science.gov (United States)

Al-Hatmi, Abdullah M S; Van Den Ende, A H G Gerrits; Stielow, J Benjamin; Van Diepeningen, Anne D; Seifert, Keith A; McCormick, Wayne; Assabgui, Rafik; Gräfenhan, Tom; De Hoog, G Sybren; Levesque, C André

2016-02-01

The genus Fusarium includes more than 200 species of which 73 have been isolated from human infections. Fusarium species are opportunistic human pathogens with variable aetiology. Species determination is best made with the combined phylogeny of protein-coding genes such as elongation factor (TEF1), RNA polymerase (RPB2) and the partial β-tubulin (BT2) gene. The internal transcribed spacers 1, 2 and 5.8S rRNA gene (ITS) have also been used, however, ITS cannot discriminate several closely related species and has nonorthologous copies in Fusarium. Currently, morphological approaches and tree-building methods are in use to define species and to discover hitherto undescribed species. Aftter a species is defined, DNA barcoding approaches can be used to identify species by the presence or absence of discrete nucleotide characters. We demonstrate the potential of two recently discovered DNA barcode loci, topoisomerase I (TOP1) and phosphoglycerate kinase (PGK), in combination with other routinely used markers such as TEF1, in an analysis of 144 Fusarium strains belonging to 52 species. Our barcoding study using TOP1 and PKG provided concordance of molecular data with TEF1. The currently accepted Fusarium species sampled were well supported in phylogenetic trees of both new markers. Copyright © 2015 The British Mycological Society. Published by Elsevier Ltd. All rights reserved.

The hydromedusae and water masses of the Indian Ocean

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D. Navas-Pereira

1991-01-01

Full Text Available This analysis of distribution and abundance of species of Hydromedusae completes a report (Vannucci & Navas, 1973b on the ecology of Indian Ocean Hydromedusae based on the zooplankton collected during the International Indian Ocean Expedition (IIOE. Distribution and abundance are taken here to be the ecological expression of variability of species in space and time. The aim was to identify the biological signature of below surface water masses that cannot be identified by remote sensing techniques. Selected species were taken as biological units, the oceanic water masses as defined by their T-S and T-O2 diagrammes were taken as the non biological units. Taken together they define different ecosystems of the Indian Ocean. About 45,000 specimens of hydromedusae taken at 480 stations were sorted from 900 plankton samples and all specimens were determined and counted. Several hauls, mostly stratified, were taken with closing nets, but not all contained hydromedusae. The distribution of each species was studied in relation to water salinity, temperature and dissolved oxygen; the limits of ecological tolerance and preference were defined by the environmental characteristics of the layers sampled by the nets and are given for each species. These can be grouped as follows: 1. Deep water species, cold tolerant, often eurytopic; 2. Antarctic species, cold loving, usually stenothermal with preference for low salinity; 3. Indian Ocean Central Water species, with preference for temperature lower than 19ºC and salinity not much higher than 35%o, usually found at sub-surface or intermediate depths, they may spread into the Arabian Sea and Bay of Bengal in surface layers; 4. Indian Ocean Equatorial System species, warm tolerant, usually prefer comparatively low salinity, high temperature and high oxygen content; 5. Bay of Bengal Surface Water species, found in surface layers of the Bay, with preference for low salinity, high temperature and high oxygen content

The Old World species of Boehmeria (Urticaceae, tribus Boehmerieae)

DEFF Research Database (Denmark)

Wilmot-Dear, Christine Melanie; Friis, Ib

2013-01-01

This is the second part of a world-wide revision of the genus Boehmeria, the previously-published part having dealt with the New World species. The Old World species are widely distributed in the tropics and subtropics from West Africa to islands in the Pacific Ocean and from Japan and China...... to Southern Africa, Madagascar and Australia, with the highest species richness in the Himalayas and their extension into China and Indochina. No indigenous species is common to both the Old and New World. The species represent taxonomic units of very different complexity: most species exhibit little...

76 FR 78242 - Endangered and Threatened Species; Take of Anadromous Fish

Science.gov (United States)

2011-12-16

... DEPARTMENT OF COMMERCE National Oceanic and Atmospheric Administration RIN 0648-XA866 Endangered and Threatened Species; Take of Anadromous Fish AGENCY: National Marine Fisheries Service (NMFS... Endangered Species Act (ESA) and to help guide management and conservation efforts. The application may be...

78 FR 23222 - Endangered and Threatened Species; Take of Anadromous Fish

Science.gov (United States)

2013-04-18

... DEPARTMENT OF COMMERCE National Oceanic and Atmospheric Administration RIN 0648-XC630 Endangered and Threatened Species; Take of Anadromous Fish AGENCY: NOAA's National Marine Fisheries Service (NMFS... CFR parts 222-226) governing listed fish and wildlife permits. Species Covered in This Notice This...

The monitoring of atmospheric mercury species in the Southern Indian Ocean at Amsterdam Island (38°S

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Barret M.

2013-04-01

Full Text Available The role of oceans in the global cycle of mercury is still poorly characterized, mainly because of a lack a long-term data on atmospheric mercury concentrations in the remote Southern Ocean. In the frame of GMOS (Global Mercury Observation System, we present here the first results from a new monitoring station at Amsterdam Island in the Southern Indian Ocean. For the period January to April 2012, we recorded mean concentration of gaseous elemental mercury (GEM, reactive gaseous mercury (RGM and particulate-bounded mercury (PHg of 1.03 ng m−3, 0.37 and 0.34 pg m−3 respectively. While GEM concentrations showed little variations, RGM and PHg exhibited fast variations with alternation of value below the instrumental detection limit and maximum values up to 4 pg m−3.

Shearwater foraging in the Southern Ocean: the roles of prey availability and winds.

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Ben Raymond

Full Text Available BACKGROUND: Sooty (Puffinus griseus and short-tailed (P. tenuirostris shearwaters are abundant seabirds that range widely across global oceans. Understanding the foraging ecology of these species in the Southern Ocean is important for monitoring and ecosystem conservation and management. METHODOLOGY/PRINCIPAL FINDINGS: Tracking data from sooty and short-tailed shearwaters from three regions of New Zealand and Australia were combined with at-sea observations of shearwaters in the Southern Ocean, physical oceanography, near-surface copepod distributions, pelagic trawl data, and synoptic near-surface winds. Shearwaters from all three regions foraged in the Polar Front zone, and showed particular overlap in the region around 140 degrees E. Short-tailed shearwaters from South Australia also foraged in Antarctic waters south of the Polar Front. The spatial distribution of shearwater foraging effort in the Polar Front zone was matched by patterns in large-scale upwelling, primary production, and abundances of copepods and myctophid fish. Oceanic winds were found to be broad determinants of foraging distribution, and of the flight paths taken by the birds on long foraging trips to Antarctic waters. CONCLUSIONS/SIGNIFICANCE: The shearwaters displayed foraging site fidelity and overlap of foraging habitat between species and populations that may enhance their utility as indicators of Southern Ocean ecosystems. The results highlight the importance of upwellings due to interactions of the Antarctic Circumpolar Current with large-scale bottom topography, and the corresponding localised increases in the productivity of the Polar Front ecosystem.

Penguins as bioindicators of mercury contamination in the Southern Ocean: Birds from the Kerguelen Islands as a case study

International Nuclear Information System (INIS)

Carravieri, Alice; Bustamante, Paco; Churlaud, Carine; Cherel, Yves

2013-01-01

Seabirds have been used extensively as bioindicators of mercury (Hg) contamination in the marine environment, although information on flightless species like penguins remains limited. In order to assess the use of penguins as bioindicators of Hg contamination in subantarctic and Antarctic marine ecosystems, Hg concentrations were evaluated in the feathers of the four species that breed on the Kerguelen Islands in the southern Indian Ocean. Compared to other seabirds, adult Kerguelen penguins had low to moderate feather Hg concentrations, with an average ranging from 1.96 ± 0.41 μg g −1 dry weight in the southern rockhopper penguin to 5.85 ± 3.00 μg g −1 dry weight in the gentoo penguin. The species was a major determinant of Hg contamination, with feather Hg concentrations being lower in the oceanic species (king and crested penguins) than in the coastal one (gentoo penguin). In all species however, feather Hg concentrations were higher in adults than in chicks, reflecting the different periods of Hg bioaccumulation in the internal tissues of the two age classes. The relationship between adult penguin trophic ecology and Hg burdens was investigated using stable isotopes. Feeding habits (reflected by δ 15 N values) had a greater effect on adult feather Hg concentrations when compared to foraging habitats (reflected by δ 13 C values), indicating Hg biomagnification in Kerguelen neritic and oceanic waters. Dietary preferences were crucial in explaining individual feather Hg concentrations, as highlighted by intra-specific variation in Hg levels of gentoo penguins sampled at two different breeding sites of the archipelago. Penguins appear to reflect Hg bioavailability reliably in their foraging environment and could serve as efficient bioindicators of Hg contamination in the Southern Ocean on different spatial and temporal scales. - Highlights: • Hg contamination was evaluated in 4 species of penguins at the Kerguelen Islands. • Adults displayed

Penguins as bioindicators of mercury contamination in the Southern Ocean: Birds from the Kerguelen Islands as a case study

Energy Technology Data Exchange (ETDEWEB)

Carravieri, Alice, E-mail: carravieri@cebc.cnrs.fr [Centre d' Etudes Biologiques de Chizé, UPR 1934 du Centre National de la Recherche Scientifique, BP 14, 79360 Villiers-en-Bois (France); Littoral Environnement et Sociétés (LIENSs), UMRi 7266 CNRS-Université de la Rochelle, 2 rue Olympe de Gouges, 17000 La Rochelle (France); Bustamante, Paco, E-mail: pbustama@univ-lr.fr [Littoral Environnement et Sociétés (LIENSs), UMRi 7266 CNRS-Université de la Rochelle, 2 rue Olympe de Gouges, 17000 La Rochelle (France); Churlaud, Carine [Littoral Environnement et Sociétés (LIENSs), UMRi 7266 CNRS-Université de la Rochelle, 2 rue Olympe de Gouges, 17000 La Rochelle (France); Cherel, Yves [Centre d' Etudes Biologiques de Chizé, UPR 1934 du Centre National de la Recherche Scientifique, BP 14, 79360 Villiers-en-Bois (France)

2013-06-01

Seabirds have been used extensively as bioindicators of mercury (Hg) contamination in the marine environment, although information on flightless species like penguins remains limited. In order to assess the use of penguins as bioindicators of Hg contamination in subantarctic and Antarctic marine ecosystems, Hg concentrations were evaluated in the feathers of the four species that breed on the Kerguelen Islands in the southern Indian Ocean. Compared to other seabirds, adult Kerguelen penguins had low to moderate feather Hg concentrations, with an average ranging from 1.96 ± 0.41 μg g{sup −1} dry weight in the southern rockhopper penguin to 5.85 ± 3.00 μg g{sup −1} dry weight in the gentoo penguin. The species was a major determinant of Hg contamination, with feather Hg concentrations being lower in the oceanic species (king and crested penguins) than in the coastal one (gentoo penguin). In all species however, feather Hg concentrations were higher in adults than in chicks, reflecting the different periods of Hg bioaccumulation in the internal tissues of the two age classes. The relationship between adult penguin trophic ecology and Hg burdens was investigated using stable isotopes. Feeding habits (reflected by δ{sup 15}N values) had a greater effect on adult feather Hg concentrations when compared to foraging habitats (reflected by δ{sup 13}C values), indicating Hg biomagnification in Kerguelen neritic and oceanic waters. Dietary preferences were crucial in explaining individual feather Hg concentrations, as highlighted by intra-specific variation in Hg levels of gentoo penguins sampled at two different breeding sites of the archipelago. Penguins appear to reflect Hg bioavailability reliably in their foraging environment and could serve as efficient bioindicators of Hg contamination in the Southern Ocean on different spatial and temporal scales. - Highlights: • Hg contamination was evaluated in 4 species of penguins at the Kerguelen Islands. • Adults

Assessing physiological tipping points in response to ocean acidification

Science.gov (United States)

Dupont, S. T.; Dorey, N.; Lançon, P.; Thorndyke, M. S.

2011-12-01

Impact of near-future ocean acidification on marine invertebrates was mostly assessed in single-species perturbation experiment. Moreover, most of these experiments are short-term, only consider one life-history stage and one or few parameters. They do not take into account important processes such as natural variability and acclimation and evolutionary processes. In many studies published so far, there is a clear lack between the observed effects and individual fitness, most of the deviation from the control being considered as potentially negative for the tested species. However, individuals are living in a fluctuating world and changes can also be interpreted as phenotypic plasticity and may not translate into negative impact on fitness. For example, a vent mussel can survive for decades in very acidic waters despite a significantly reduced calcification compare to control (Tunnicliffe et al. 2009). This is possible thanks to the absence of predatory crabs as a result of acidic conditions that may also inhibit carapace formation. This illustrates the importance to take into account ecological interactions when interpreting single-species experiments and to consider the relative fitness between interacting species. To understand the potential consequence of ocean acidification on any given ecosystem, it is then critical to consider the relative impact on fitness for every interactive species and taking into account the natural fluctuation in environment (e.g. pH, temperature, food concentration, abundance) and discriminate between plasticity with no direct impact on fitness and teratology with direct consequence on survival. In this presentation, we will introduce the concept of "physiological tipping point" in the context of ocean acidification. This will be illustrated by some work done on sea urchin development. Embryos and larvae of the sea urchin Strongylocentrotus droebachiensis were exposed to a range of pH from 8.1 to 6.5. When exposed to low pH, growth

Species distribution models of tropical deep-sea snappers.

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Céline Gomez

Full Text Available Deep-sea fisheries provide an important source of protein to Pacific Island countries and territories that are highly dependent on fish for food security. However, spatial management of these deep-sea habitats is hindered by insufficient data. We developed species distribution models using spatially limited presence data for the main harvested species in the Western Central Pacific Ocean. We used bathymetric and water temperature data to develop presence-only species distribution models for the commercially exploited deep-sea snappers Etelis Cuvier 1828, Pristipomoides Valenciennes 1830, and Aphareus Cuvier 1830. We evaluated the performance of four different algorithms (CTA, GLM, MARS, and MAXENT within the BIOMOD framework to obtain an ensemble of predicted distributions. We projected these predictions across the Western Central Pacific Ocean to produce maps of potential deep-sea snapper distributions in 32 countries and territories. Depth was consistently the best predictor of presence for all species groups across all models. Bathymetric slope was consistently the poorest predictor. Temperature at depth was a good predictor of presence for GLM only. Model precision was highest for MAXENT and CTA. There were strong regional patterns in predicted distribution of suitable habitat, with the largest areas of suitable habitat (> 35% of the Exclusive Economic Zone predicted in seven South Pacific countries and territories (Fiji, Matthew & Hunter, Nauru, New Caledonia, Tonga, Vanuatu and Wallis & Futuna. Predicted habitat also varied among species, with the proportion of predicted habitat highest for Aphareus and lowest for Etelis. Despite data paucity, the relationship between deep-sea snapper presence and their environments was sufficiently strong to predict their distribution across a large area of the Pacific Ocean. Our results therefore provide a strong baseline for designing monitoring programs that balance resource exploitation and

Silent oceans: ocean acidification impoverishes natural soundscapes by altering sound production of the world's noisiest marine invertebrate.

Science.gov (United States)

Rossi, Tullio; Connell, Sean D; Nagelkerken, Ivan

2016-03-16

Soundscapes are multidimensional spaces that carry meaningful information for many species about the location and quality of nearby and distant resources. Because soundscapes are the sum of the acoustic signals produced by individual organisms and their interactions, they can be used as a proxy for the condition of whole ecosystems and their occupants. Ocean acidification resulting from anthropogenic CO2 emissions is known to have profound effects on marine life. However, despite the increasingly recognized ecological importance of soundscapes, there is no empirical test of whether ocean acidification can affect biological sound production. Using field recordings obtained from three geographically separated natural CO2 vents, we show that forecasted end-of-century ocean acidification conditions can profoundly reduce the biological sound level and frequency of snapping shrimp snaps. Snapping shrimp were among the noisiest marine organisms and the suppression of their sound production at vents was responsible for the vast majority of the soundscape alteration observed. To assess mechanisms that could account for these observations, we tested whether long-term exposure (two to three months) to elevated CO2 induced a similar reduction in the snapping behaviour (loudness and frequency) of snapping shrimp. The results indicated that the soniferous behaviour of these animals was substantially reduced in both frequency (snaps per minute) and sound level of snaps produced. As coastal marine soundscapes are dominated by biological sounds produced by snapping shrimp, the observed suppression of this component of soundscapes could have important and possibly pervasive ecological consequences for organisms that use soundscapes as a source of information. This trend towards silence could be of particular importance for those species whose larval stages use sound for orientation towards settlement habitats. © 2016 The Author(s).

Transgenerational exposure of North Atlantic bivalves to ocean acidification renders offspring more vulnerable to low pH and additional stressors.

Science.gov (United States)

Griffith, Andrew W; Gobler, Christopher J

2017-09-12

While early life-stage marine bivalves are vulnerable to ocean acidification, effects over successive generations are poorly characterized. The objective of this work was to assess the transgenerational effects of ocean acidification on two species of North Atlantic bivalve shellfish, Mercenaria mercenaria and Argopecten irradians. Adults of both species were subjected to high and low pCO 2 conditions during gametogenesis. Resultant larvae were exposed to low and ambient pH conditions in addition to multiple, additional stressors including thermal stress, food-limitation, and exposure to a harmful alga. There were no indications of transgenerational acclimation to ocean acidification during experiments. Offspring of elevated pCO 2 -treatment adults were significantly more vulnerable to acidification as well as the additional stressors. Our results suggest that clams and scallops are unlikely to acclimate to ocean acidification over short time scales and that as coastal oceans continue to acidify, negative effects on these populations may become compounded and more severe.

Climate change and Southern Ocean ecosystems I: how changes in physical habitats directly affect marine biota.

Science.gov (United States)

Constable, Andrew J; Melbourne-Thomas, Jessica; Corney, Stuart P; Arrigo, Kevin R; Barbraud, Christophe; Barnes, David K A; Bindoff, Nathaniel L; Boyd, Philip W; Brandt, Angelika; Costa, Daniel P; Davidson, Andrew T; Ducklow, Hugh W; Emmerson, Louise; Fukuchi, Mitsuo; Gutt, Julian; Hindell, Mark A; Hofmann, Eileen E; Hosie, Graham W; Iida, Takahiro; Jacob, Sarah; Johnston, Nadine M; Kawaguchi, So; Kokubun, Nobuo; Koubbi, Philippe; Lea, Mary-Anne; Makhado, Azwianewi; Massom, Rob A; Meiners, Klaus; Meredith, Michael P; Murphy, Eugene J; Nicol, Stephen; Reid, Keith; Richerson, Kate; Riddle, Martin J; Rintoul, Stephen R; Smith, Walker O; Southwell, Colin; Stark, Jonathon S; Sumner, Michael; Swadling, Kerrie M; Takahashi, Kunio T; Trathan, Phil N; Welsford, Dirk C; Weimerskirch, Henri; Westwood, Karen J; Wienecke, Barbara C; Wolf-Gladrow, Dieter; Wright, Simon W; Xavier, Jose C; Ziegler, Philippe

2014-10-01

Antarctic and Southern Ocean (ASO) marine ecosystems have been changing for at least the last 30 years, including in response to increasing ocean temperatures and changes in the extent and seasonality of sea ice; the magnitude and direction of these changes differ between regions around Antarctica that could see populations of the same species changing differently in different regions. This article reviews current and expected changes in ASO physical habitats in response to climate change. It then reviews how these changes may impact the autecology of marine biota of this polar region: microbes, zooplankton, salps, Antarctic krill, fish, cephalopods, marine mammals, seabirds, and benthos. The general prognosis for ASO marine habitats is for an overall warming and freshening, strengthening of westerly winds, with a potential pole-ward movement of those winds and the frontal systems, and an increase in ocean eddy activity. Many habitat parameters will have regionally specific changes, particularly relating to sea ice characteristics and seasonal dynamics. Lower trophic levels are expected to move south as the ocean conditions in which they are currently found move pole-ward. For Antarctic krill and finfish, the latitudinal breadth of their range will depend on their tolerance of warming oceans and changes to productivity. Ocean acidification is a concern not only for calcifying organisms but also for crustaceans such as Antarctic krill; it is also likely to be the most important change in benthic habitats over the coming century. For marine mammals and birds, the expected changes primarily relate to their flexibility in moving to alternative locations for food and the energetic cost of longer or more complex foraging trips for those that are bound to breeding colonies. Few species are sufficiently well studied to make comprehensive species-specific vulnerability assessments possible. Priorities for future work are discussed. © 2014 John Wiley & Sons Ltd.

To brood or not to brood: Are marine invertebrates that protect their offspring more resilient to ocean acidification?

Science.gov (United States)

Lucey, Noelle Marie; Lombardi, Chiara; Demarchi, Lucia; Schulze, Anja; Gambi, Maria Cristina; Calosi, Piero

2015-07-01

Anthropogenic atmospheric carbon dioxide (CO2) is being absorbed by seawater resulting in increasingly acidic oceans, a process known as ocean acidification (OA). OA is thought to have largely deleterious effects on marine invertebrates, primarily impacting early life stages and consequently, their recruitment and species’ survival. Most research in this field has been limited to short-term, single-species and single-life stage studies, making it difficult to determine which taxa will be evolutionarily successful under OA conditions. We circumvent these limitations by relating the dominance and distribution of the known polychaete worm species living in a naturally acidic seawater vent system to their life history strategies. These data are coupled with breeding experiments, showing all dominant species in this natural system exhibit parental care. Our results provide evidence supporting the idea that long-term survival of marine species in acidic conditions is related to life history strategies where eggs are kept in protected maternal environments (brooders) or where larvae have no free swimming phases (direct developers). Our findings are the first to formally validate the hypothesis that species with life history strategies linked to parental care are more protected in an acidifying ocean compared to their relatives employing broadcast spawning and pelagic larval development.

Biotic interactions overrule plant responses to climate, depending on the species' biogeography.

Directory of Open Access Journals (Sweden)

Astrid Welk

Full Text Available This study presents an experimental approach to assess the relative importance of climatic and biotic factors as determinants of species' geographical distributions. We asked to what extent responses of grassland plant species to biotic interactions vary with climate, and to what degree this variation depends on the species' biogeography. Using a gradient from oceanic to continental climate represented by nine common garden transplant sites in Germany, we experimentally tested whether congeneric grassland species of different geographic distribution (oceanic vs. continental plant range type responded differently to combinations of climate, competition and mollusc herbivory. We found the relative importance of biotic interactions and climate to vary between the different components of plant performance. While survival and plant height increased with precipitation, temperature had no effect on plant performance. Additionally, species with continental plant range type increased their growth in more benign climatic conditions, while those with oceanic range type were largely unable to take a similar advantage of better climatic conditions. Competition generally caused strong reductions of aboveground biomass and growth. In contrast, herbivory had minor effects on survival and growth. Against expectation, these negative effects of competition and herbivory were not mitigated under more stressful continental climate conditions. In conclusion we suggest variation in relative importance of climate and biotic interactions on broader scales, mediated via species-specific sensitivities and factor-specific response patterns. Our results have important implications for species distribution models, as they emphasize the large-scale impact of biotic interactions on plant distribution patterns and the necessity to take plant range types into account.

Sea Cucumber (Holothuroidea Species of Turkey

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Mehmet AYDIN

2016-11-01

Full Text Available There are nearly 1200 sea cucumber species in the world oceans, while only 37 species from Holothuroidea class lives in the Mediterranean Sea. This preliminary study aims identification sea cucumbers species of the Turkish waters. The sea cucumber samples used in this study were obtained from a series of different studies between the years of 2008 and 2014. Identification of the species are mainly based on the morphometric characteristics while some of species are determined from their calcareous spicules. Eight sea species were identified in this research which are; Holothuria tubulosa, Holothuria polii, Holothuria mammata, Holothuria (Platyperona sanctori, Holothuria forskali, Stichopus regalis, Synaptula reciprocans and Stereoderma kirschbergi. There are limited number of studies in the literature focusing on the identification of the sea cucumber species spread in our seas. Therefore, this study is believed to play an important role in guiding future researches.

Biogeography of seabirds within a high-latitude ecosystem: Use of a data-assimilative ocean model to assess impacts of mesoscale oceanography

Science.gov (United States)

Santora, Jarrod A.; Eisner, Lisa B.; Kuletz, Kathy J.; Ladd, Carol; Renner, Martin; Hunt, George L., Jr.

2018-02-01

We assessed the biogeography of seabirds within the Bering Sea Large Marine Ecosystem (LME), a highly productive and extensive continental shelf system that supports important fishing grounds. Our objective was to investigate how physical ocean conditions impact distribution of seabirds along latitudinal gradients. We tested the hypothesis that seabird biogeographic patterns reflect differences in ocean conditions relating to the boundary between northern and southern shelf ecosystems. We used a grid-based approach to develop spatial means (1975-2014) of summertime seabird species' abundance, species' richness, and a multivariate seabird assemblage index to examine species composition. Seabird indices were linked to ocean conditions derived from a data-assimilative oceanographic model to quantify relationships between physics (e.g., temperature, salinity, and current velocity), bathymetry and seabirds along latitudinal gradients. Species assemblages reflected two main sources of variation, a mode for elevated richness and abundance, and a mode related to partitioning of inner/middle shelf species from outer shelf-slope species. Overall, species richness and abundance increased markedly at higher latitudes. We found that latitudinal changes in species assemblages, richness and abundance indicates a major shift around 59-60°N within inner and middle shelf regions, but not in the outer shelf. Within the middle shelf, latitudinal shifts in seabird assemblages strongly related to hydrographic structure, as opposed to the inner and outer shelf waters. As expected, elevated species richness and abundance was associated with major breeding colonies and within important coastal foraging areas. Our study also indicates that seabird observations supported the conclusion that the oceanographic model captured mesoscale variability of ocean conditions important for understanding seabird distributions and represents an important step for evaluating modeling and empirical studies

Pollination, biogeography and phylogeny of oceanic island bellflowers (Campanulaceae)

DEFF Research Database (Denmark)

Olesen, Jens Mogens; Alarcón, M.; Ehlers, Bodil

2012-01-01

relatives C. eminii and C. abyssinica. We asked to what extent related species converge in their floral biology and pollination in related habitats, i.e. oceanic islands. Study islands were the Azores, Madeira, Canary Islands, Cape Verde, Mauritius, and Réunion. Information about phylogenetic relationships....... These examples of vertebrate pollination evolved independently on each island or archipelago. We discuss if these pollination systems have an island or mainland origin and when they may have evolved, and finally, we attempt to reconstruct the pollinator-interaction history of each species....

Agaricus chionodermus Pilát, a species new to Bulgaria

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Maria Nikolova Lacheva

2014-12-01

Full Text Available The article presents the first record of Agaricus chionoderma Pilát in Bulgaria. Basidiomata of the species were found on June 2004, September 2010, and September 2011 in the Thracian Lowland floristic region. The article brings closer taxonomic profile, ecological requirements and distribution pattern of the species. Differences from similar species are discussed. It also describes macroscopic and microscopic characteristics of the discovered specimens and presents the specification of habitat the fungus concerned. The species are described and illustrated by photographs of macroscopic and microscopic features on the basis of Bulgarian specimens.

Carcharhinus humani sp. nov., a new whaler shark (Carcharhiniformes:Carcharhinidae) from the western Indian Ocean.

Science.gov (United States)

White, William T; Weigmann, Simon

2014-06-19

A new species of whaler shark, Carcharhinus humani sp. nov., is described based on five type specimens from the western Indian Ocean near the Socotra Islands, off Kuwait, Mozambique, and South Africa. The new species represents the fifth species of the C. dussumieri/sealei group and the third species of the C. sealei subgroup. The new species is the only species of the C. sealei subgroup known from the western Indian Ocean. Within the C. sealei subgroup, C. humani differs from C. sealei in having a sharply demarcated black apical marking on the second dorsal fin which does not extend onto body surface (vs. black marking diffuse-edged and usually extending onto upper sides of trunk), a longer horizontal prenarial length (4.1-4.7 vs. 3.4-4.2% TL), and a longer preoral length (6.8-7.6 vs. 5.7-6.5% TL); C. humani differs from C. coatesi in having a taller second dorsal fin (its height 4.0-4.5 vs. 2.9-3.6% TL), a shorter first dorsal fin (its length 13.4-14.6 vs. 14.8-17.3% TL), and more vertebrae (total centra 152-167 vs. 134-147).

Ocean acidification effects on Caribbean scleractinian coral calcification using a recirculating system: a novel approach to OA research

Science.gov (United States)

Projected increases in ocean pCO2 levels are likely to affect calcifying organisms more rapidly and to a greater extent than any other marine organisms. The effects of ocean acidification (OA) has been documented in numerous species of corals in both laboratory and field studies....

Host resistance in potato to three Globodera species

Science.gov (United States)

Potato cyst nematodes (PCN) under quarantine in the U.S. and Canada are the pale cyst nematode (Globodera pallida) and the golden cyst nematode (G. rostochiensis). A new species, G. ellingtonae was discovered in Oregon and Idaho in 2008 and is not currently a quarantine pest. In 2006 detection of ...

Thalassiosira spp. community composition shifts in response to chemical and physical forcing in the northeast Pacific Ocean.

Directory of Open Access Journals (Sweden)

Phoebe Dreux Chappell

2013-09-01

Full Text Available Diatoms are genetically diverse unicellular photosynthetic eukaryotes that are key primary producers in the ocean. Many of the over 100 extant diatom species in the cosmopolitan genus Thalassiosira are difficult to distinguish in mixed populations using light microscopy. Here we examine shifts in Thalassiosira spp. composition along a coastal to open ocean transect that encountered a three-month-old Haida eddy in the northeast Pacific Ocean. To quantify shifts in Thalassiosira species composition, we developed a targeted automated ribosomal intergenic spacer analysis (ARISA method to identify Thalassiosira spp. in environmental samples. As many specific fragment lengths are indicative of individual Thalassiosira spp., the ARISA method is a useful screening tool to identify changes in the relative abundance and distribution of specific species. The method also enabled us to assess changes in Thalassiosira community composition in response to chemical and physical forcing. Thalassiosira spp. community composition in the core of a three-month-old Haida eddy remained largely (>80% similar over a two-week period, despite moving 24 km southwestward. Shifts in Thalassiosira species correlated with changes in dissolved iron (Fe and temperature throughout the sampling period. Simultaneously tracking community composition and relative abundance of Thalassiosira species within the physical and chemical context they occurred allowed us to identify quantitative linkages between environmental conditions and community response.

Zooplankton species identities, zooplankton species number per sample, and zooplankton abundance collected using zooplankton net as part of the California Cooperative Fisheries Investigation (CALCOFI) project, for 1994-03-01 (NODC Accession 9700104)

Data.gov (United States)

National Oceanic and Atmospheric Administration, Department of Commerce — Zooplankton species identities, zooplankton species number per sample, and zooplankton abundance were collected from March 1, 1994 to March 1, 1994. Data were...

Enterobius vermicularis Eggs Discovered in Coprolites from a Medieval Korean Mummy

Science.gov (United States)

Shin, Dong Hoon; Oh, Chang Seok; Chai, Jong-Yil; Lee, Hye-Jung

2011-01-01

While the presence of pinworm eggs in archaeological samples has been reported by many researchers in the New World, those have been detected very scarcely in the Old World, especially in East Asian countries. In fact, many parasite species were recovered from the archeological remains in Korea, eggs of Enterobius vermicularis had not been found. Recently, a female mummy buried in the 17th century was discovered in the Joseon tomb from Dangjin-gun, Chungcheongnam-do, Korea. After rehydration process for 12 days, investigations were carried on the luminal surface of the colon. From them, 3 eggs of E. vermicularis were recovered. They were elliptical, transparent with a thin egg shell, 50.3±5.2 µm (length) and 28.2±3.9 µm (width) in size. This is the first discovery of E. vermicularis eggs in East Asia. PMID:22072838

Tiger sharks can connect equatorial habitats and fisheries across the Atlantic Ocean basin.

Directory of Open Access Journals (Sweden)

André S Afonso

Full Text Available Increasing our knowledge about the spatial ecology of apex predators and their interactions with diverse habitats and fisheries is necessary for understanding the trophic mechanisms that underlie several aspects of marine ecosystem dynamics and for guiding informed management policies. A preliminary assessment of tiger shark (Galeocerdo cuvier population structure off the oceanic insular system of Fernando de Noronha (FEN and the large-scale movements performed by this species in the equatorial Atlantic Ocean was conducted using longline and handline fishing gear and satellite telemetry. A total of 25 sharks measuring 175-372 cm in total length (TL were sampled. Most sharks were likely immature females ranging between 200 and 260 cm TL, with few individuals < 200 cm TL being caught. This contrasts greatly with the tiger shark size-distribution previously reported for coastal waters off the Brazilian mainland, where most individuals measured < 200 cm TL. Also, the movements of 8 individuals measuring 202-310 cm TL were assessed with satellite transmitters for a combined total of 757 days (mean = 94.6 days∙shark-1; SD = 65.6. These sharks exhibited a considerable variability in their horizontal movements, with three sharks showing a mostly resident behavior around FEN during the extent of the respective tracks, two sharks traveling west to the South American continent, and two sharks moving mostly along the middle of the oceanic basin, one of which ending up in the northern hemisphere. Moreover, one shark traveled east to the African continent, where it was eventually caught by fishers from Ivory Coast in less than 474 days at liberty. The present results suggest that young tiger sharks measuring < 200 cm TL make little use of insular oceanic habitats from the western South Atlantic Ocean, which agrees with a previously-hypothesized ontogenetic habitat shift from coastal to oceanic habitats experienced by juveniles of this species in this region

Interactive effects of ocean acidification and nitrogen limitation on two bloom-forming dinoflagellate species

NARCIS (Netherlands)

Eberlein, T.; Van de Waal, D.B.; Brandenburg, Karen M.; John, U.; Voss, M.; Achterberg, E.P.; Rost, B.

2016-01-01

Global climate change involves an increase in oceanic CO2 concentrations as well as thermal stratification of the water column, thereby reducing nutrient supply from deep to surface waters. Changes in inorganic carbon (C) or nitrogen (N) availability have been shown to affect marine primary

Vertical distribution and migration of euphausiid species in the Red Sea

KAUST Repository

Wiebe, Peter H.

2016-06-01

We addressed how the extreme environmental conditions of the Red Sea impact or alter patterns of vertical distribution and vertical migration of five euphausiid species that are known from other oceans. Euphausia diomedeae was abundant and performed diel vertical migration (DVM) from >200 m in daytime to <100 m at night, similar to its pattern in other ocean regions. Euphausia sibogae and Euphausia sanzoi also showed consistent patterns of DVM across their ranges in the Red Sea and elsewhere. Two species, Stylocheiron affine and Stylocheiron abbreviatum, did not exhibit DVM. DNA barcode sequences for mitochondrial cytochrome oxidase I (COI) were used to confirm species identifications for four species (no previous barcode data exist for E. sanzoi). COI sequence differences averaged 2.8% (SD 3.1%) within species and 16.6% (SD 0.7%) between species, similar to previous studies of euphausiids. Red Sea specimens of S. affine matched morphological descriptions of a western equatorial form and differed 14% from Atlantic and Pacific specimens, suggesting possible cryptic species-level variation within this taxon. Widely distributed species of zooplankton may exhibit broad tolerance ranges for key environmental variables, and have considerable potential to adapt to variable and changing conditions across their geographic range.

Marine oxygen holes as a consequence of oceanic acidification

Science.gov (United States)

Hofmann, M.; Schellnhuber, H.-J.

2009-04-01

An increase of atmospheric CO2 levels will not only drive future global mean temperatures towards values unprecedented during the whole Quaternary, but will also lead to an acidification of sea water which could harm the marine biota. Here we assess possible impacts of elevated atmospheric CO2 concentrations on the marine biological carbon pump by utilizing a business-as-usual emission scenario of anthropogenic CO2. A corresponding release of 4075 Petagrams of Carbon in total has been applied to simulate the current millennium by employing an Earth System Model of Intermediate Complexity (EMIC). This work is focused on studying the implications of reduced biogenic calcification caused by an increasing degree of oceanic acidification on the marine biological carbon pump. The attenuation of biogenic calcification imposes a small negative feedback on rising atmospheric pCO2 levels, tending to stabilize the Earth's climate. Since mineral ballast, notably particulate CaCO3, plays a dominant role in carrying organic matter through the water column, a reduction of its export fluxes weakens the strength of the biological carbon pump. There is, however, a dramatic effect discovered in our model world with severe consequences: since organic matter is oxidized in shallow waters when mineral-ballast fluxes weaken, oxygen holes (hypoxic zones) start to expand considerably in the oceans with potentially harmful impacts on a variety of marine ecosystems. Our study indicates that unbridled ocean acidification would exacerbate the observed hypoxia trends due to various environmental factors as reported in recent empirical studies.

Utilizing NASA DISCOVER-AQ Data to Examine Spatial Gradients in Complex Emission Environments

Science.gov (United States)

Buzanowicz, M. E.; Moore, W.; Crawford, J. H.; Schroeder, J.

2017-12-01

Although many regulations have been enacted with the goal of improving air quality, many parts of the US are still classified as `non-attainment areas' because they frequently violate federal air quality standards. Adequately monitoring the spatial distribution of pollutants both within and outside of non-attainment areas has been an ongoing challenge for regulators. Observations of near-surface pollution from space-based platforms would provide an unprecedented view of the spatial distribution of pollution, but this goal has not yet been realized due to fundamental limitations of satellites, specifically because the footprint size of satellite measurements may not be sufficiently small enough to capture true gradients in pollution, and rather represents an average over a large area. NASA's DISCOVER-AQ was a multi-year field campaign aimed at improving our understanding of the role that remote sensing, including satellite-based remote sensing, could play in air quality monitoring systems. DISCOVER-AQ data will be utilized to create a metric to examine spatial gradients and how satellites can capture those gradients in areas with complex emission environments. Examining horizontal variability within a vertical column is critical to understanding mixing within the atmosphere. Aircraft spirals conducted during DISCOVER-AQ were divided into octants, and averages of a given a species were calculated, with certain points receiving a flag. These flags were determined by calculating gradients between subsequent octants. Initial calculations have shown that over areas with large point source emissions, such as Platteville and Denver-La Casa in Colorado, and Essex, Maryland, satellite retrievals may not adequately capture spatial variability in the atmosphere, thus complicating satellite inversion techniques and limiting our ability to understand human exposure on sub-grid scales. Further calculations at other locations and for other trace gases are necessary to determine

Studying ocean acidification in the Arctic Ocean

Science.gov (United States)

Robbins, Lisa

2012-01-01

The U.S. Geological Survey (USGS) partnership with the U.S. Coast Guard Ice Breaker Healey and its United Nations Convention Law of the Sea (UNCLOS) cruises has produced new synoptic data from samples collected in the Arctic Ocean and insights into the patterns and extent of ocean acidification. This framework of foundational geochemical information will help inform our understanding of potential risks to Arctic resources due to ocean acidification.

Plastic pellets as oviposition site and means of dispersal for the ocean-skater insect Halobates.

Science.gov (United States)

Majer, A P; Vedolin, M C; Turra, A

2012-06-01

Microplastics are omnipresent in the oceans and generally have negative impacts on the biota. However, flotsam may increase the availability of hard substrates, which are considered a limiting resource for some oceanic species, e.g. as oviposition sites for the ocean insect Halobates. This study describes the use of plastic pellets as an oviposition site for Halobates micans and discusses possible effects on its abundance and dispersion. Inspection of egg masses on stranded particles on beaches revealed that a mean of 24% (from 0% to 62%) of the pellets bore eggs (mean of 5 and max. of 48 eggs per pellet). Most eggs (63%) contained embryos, while 37% were empty egg shells. This shows that even small plastic particles are used as oviposition site by H. micans, and that marine litter may have a positive effect over the abundance and dispersion of this species. Copyright © 2012 Elsevier Ltd. All rights reserved.

Calcification in Caribbean reef-building corals at high pCO2 levels in a recirculating ocean acidification exposure system

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Projected increases in ocean pCO2 levels are anticipated to affect calcifying organisms more rapidly and to a greater extent than other marine organisms. The effects of ocean acidification (OA) have been documented in numerous species of corals in laboratory studies, largely test...

NOAA Office of Ocean Exploration and Research'sOkeanos Explorer Program 2014 Discoveries - U.S. Atlantic Continental Margin and Gulf of Mexico

Science.gov (United States)

Lobecker, E.; McKenna, L.; Sowers, D.; Elliott, K.; Kennedy, B.

2014-12-01

NOAA ShipOkeanos Explorer, the only U.S. federal vessel dedicated to global ocean exploration, made several important discoveries in U.S. waters of the North Atlantic Ocean and Gulf of Mexico during the 2014 field season. Based on input received from a broad group ofmarine scientists and resource managers, over 100,000 square kilometers of seafloor and associated water column were systematically explored using advanced mapping sonars. 39 ROV diveswere conducted, leading to new discoveries that will further ourunderstanding of biologic, geologic, and underwater-cultural heritage secrets hidden withinthe oceans. In the Atlantic, season highlights include completion of a multi-year submarine canyons mapping effort of the continental shelf break from North Carolina to the U.S.-Canada maritime border;new information on the ephemerality of recently discovered and geographically extensive cold water seeps; and continued exploration of the New England Seamount chain; and mapping of two potential historically significant World War II wreck sites. In the Gulf of Mexico, season highlights includecompletion of a multi-year mapping effort of the West Florida Escarpment providing new insight into submarine landslides and detachment zones;the discovery of at least two asphalt volcanoes, or 'tar lilies'; range extensions of deep-sea corals; discovery of two potential new species of crinoids; identification of at least 300 potential cold water seeps; and ROV exploration of three historically significant19th century shipwrecks. In both regions, high-resolution mapping led to new insight into the geological context in which deep sea corals develop,while ROV dives provided valuable observations of deep sea coral habitats and their associated organisms, and chemosynthetic habitats. All mapping and ROV data is freely available to the public in usable data formats and maintained in national geophysical and oceanographic data archives.

Coralline algae elevate pH at the site of calcification under ocean acidification.

Science.gov (United States)

Cornwall, Christopher E; Comeau, Steeve; McCulloch, Malcolm T

2017-10-01

Coralline algae provide important ecosystem services but are susceptible to the impacts of ocean acidification. However, the mechanisms are uncertain, and the magnitude is species specific. Here, we assess whether species-specific responses to ocean acidification of coralline algae are related to differences in pH at the site of calcification within the calcifying fluid/medium (pH cf ) using δ 11 B as a proxy. Declines in δ 11 B for all three species are consistent with shifts in δ 11 B expected if B(OH) 4 - was incorporated during precipitation. In particular, the δ 11 B ratio in Amphiroa anceps was too low to allow for reasonable pH cf values if B(OH) 3 rather than B(OH) 4 - was directly incorporated from the calcifying fluid. This points towards δ 11 B being a reliable proxy for pH cf for coralline algal calcite and that if B(OH) 3 is present in detectable proportions, it can be attributed to secondary postincorporation transformation of B(OH) 4 - . We thus show that pH cf is elevated during calcification and that the extent is species specific. The net calcification of two species of coralline algae (Sporolithon durum, and Amphiroa anceps) declined under elevated CO 2 , as did their pH cf . Neogoniolithon sp. had the highest pH cf , and most constant calcification rates, with the decrease in pH cf being ¼ that of seawater pH in the treatments, demonstrating a control of coralline algae on carbonate chemistry at their site of calcification. The discovery that coralline algae upregulate pH cf under ocean acidification is physiologically important and should be included in future models involving calcification. © 2017 John Wiley & Sons Ltd.

Decision mining revisited - Discovering overlapping rules

NARCIS (Netherlands)

Mannhardt, Felix; De Leoni, Massimiliano; Reijers, Hajo A.; Van Der Aalst, Wil M P

2016-01-01

Decision mining enriches process models with rules underlying decisions in processes using historical process execution data. Choices between multiple activities are specified through rules defined over process data. Existing decision mining methods focus on discovering mutually-exclusive rules,

Decision Mining Revisited - Discovering Overlapping Rules

NARCIS (Netherlands)

Mannhardt, F.; De Leoni, M.; Reijers, H.A.; van der Aalst, W.M.P.; Nurcan, S.; Soffer, P.; Bajec, M.; Eder, J.

2016-01-01

Decision mining enriches process models with rules underlying decisions in processes using historical process execution data. Choices between multiple activities are specified through rules defined over process data. Existing decision mining methods focus on discovering mutually-exclusive rules,

The contribution of migratory mesopelagic fishes to neuston fish assemblages across the Atlantic, Indian and Pacific Oceans

KAUST Repository

Olivar, M. Pilar

2015-08-27

Surface waters are an attractive foraging ground for small fish in the open ocean. This study aims to determine the importance of vertically migrating species in the neuston of oceanic waters across the Atlantic, Indian and Pacific Oceans and to ascertain the influence of environmental variables on their distribution patterns. Neustonic fish assemblages were primarily controlled by light. They were dominated by late-larvae and juveniles of Exocoetidae, Hemiramphidae and Scomberesocidae during the day. At night, the vertical migration of mesopelagic species changed the dominance pattern in favour of Myctophidae and Scomberesocidae. The neustonic families\\' distribution was primarily related to sea surface temperatures, whereas environmental variables at deeper layers were related to mesopelagic migrating families. Canonical correspondence analysis showed a low but statistically significant contribution of several environmental variables to myctophid species composition (10%), with minimum oxygen concentrations ranking first in variance explanation followed by maximum fluorescence, sea surface temperature and 400-m temperature. Spatial autocorrelation also explained 17% of the variance, indicating the influence of other factors such as historical, demographic and dispersal constraints. The low number of myctophid species in the North Pacific Equatorial Countercurrent appears to be related to the low oxygen concentrations observed in this province.

The contribution of migratory mesopelagic fishes to neuston fish assemblages across the Atlantic, Indian and Pacific Oceans

KAUST Repository

Olivar, M. Pilar; Gonzá lez-Gordillo, J. Ignacio; Salat, Jordi; Chust, Guillem; Có zar, André s; Herná ndez-Leó n, Santiago; Ferná ndez de Puelles, M. Luz; Irigoien, Xabier

2015-01-01

Surface waters are an attractive foraging ground for small fish in the open ocean. This study aims to determine the importance of vertically migrating species in the neuston of oceanic waters across the Atlantic, Indian and Pacific Oceans and to ascertain the influence of environmental variables on their distribution patterns. Neustonic fish assemblages were primarily controlled by light. They were dominated by late-larvae and juveniles of Exocoetidae, Hemiramphidae and Scomberesocidae during the day. At night, the vertical migration of mesopelagic species changed the dominance pattern in favour of Myctophidae and Scomberesocidae. The neustonic families' distribution was primarily related to sea surface temperatures, whereas environmental variables at deeper layers were related to mesopelagic migrating families. Canonical correspondence analysis showed a low but statistically significant contribution of several environmental variables to myctophid species composition (10%), with minimum oxygen concentrations ranking first in variance explanation followed by maximum fluorescence, sea surface temperature and 400-m temperature. Spatial autocorrelation also explained 17% of the variance, indicating the influence of other factors such as historical, demographic and dispersal constraints. The low number of myctophid species in the North Pacific Equatorial Countercurrent appears to be related to the low oxygen concentrations observed in this province.

Sibling species of copepods in association with Mediterranean gorgorians

Directory of Open Access Journals (Sweden)

Mercedes Conradi

2004-03-01

Full Text Available Hitherto a single species of Doridicola Leydig (Poecilostomatoida: Rhynchomolgidae has been found reported in association with gorgonians in Europe: Doridicola botulosus (Stock and Kleeton, 1963, living on the Mediterranean gorgonian Eunicella singularis (Esper, 1791. During a survey along the Iberian Mediterranean coast, several specimens of D. botulosus were collected from its reported host. Furthermore, an undescribed species of Doridicola was discovered living in association with Paramuricea clavata (Risso, 1826, a Mediterranean gorgonian usually living in overlaps with that of E. singularis. Although the new species is close to D. botulosus, they differ in the oral appendages. A common origin of these two species was suggested. This is a good example of sibling species produced by the colonisation of two hosts with overlapping habitats

Ocean tides

Science.gov (United States)

Hendershott, M. C.

1975-01-01

A review of recent developments in the study of ocean tides and related phenomena is presented. Topics briefly discussed include: the mechanism by which tidal dissipation occurs; continental shelf, marginal sea, and baroclinic tides; estimation of the amount of energy stored in the tide; the distribution of energy over the ocean; the resonant frequencies and Q factors of oceanic normal modes; the relationship of earth tides and ocean tides; and numerical global tidal models.

77 FR 20774 - Endangered and Threatened Species; Proposed Threatened Status for Distinct Population Segments of...

Science.gov (United States)

2012-04-06

... DEPARTMENT OF COMMERCE National Oceanic and Atmospheric Administration 50 CFR Part 223 RIN 0648-XZ58 Endangered and Threatened Species; Proposed Threatened Status for Distinct Population Segments of the Bearded Seal AGENCY: National Marine Fisheries Service (NMFS), National Oceanic and Atmospheric...

Response of Halimeda to ocean acidification: Field and laboratory evidence

Science.gov (United States)

Robbins, L.L.; Knorr, P.O.; Hallock, P.

2009-01-01

Rising atmospheric pCO2 levels are changing ocean chemistry more dramatically now than in the last 20 million years. In fact, pHvalues of the open ocean have decreased by 0.1 since the 1800s and are predicted to decrease 0.1-0.4 globally in the next 90 years. Ocean acidification will affect fundamental geochemical and biological processes including calcification and carbonate sediment production. The west Florida shelf is a natural laboratory to examine the effects of ocean acidification on aragonite production by calcareous green algae. Scanning electron microscopy (SEM) of crystal morphology of calcifying organisms reveals ultrastructural details of calcification that occurred at different saturation states. Comparison of archived and recent specimens of calcareous green alga Halimeda spp. from the west Florida shelf, demonstrates crystal changes in shape and abundance over a 40+ year time span. Halimeda crystal data from apical sections indicate that increases in crystal concentration and decreases in crystal width occurred over the last 40+ years. Laboratory experiments using living specimens of Halimeda grown in environments with known pH values were used to constrain historical observations. Percentages of organic and inorganic carbon per sample weight of pooled species did not significantly change. However, individual species showed decreased inorganic carbon and increased organic carbon in more recent samples, although the sample sizes were limited. These results indicate that the effect of increased pCO 2 and decreased pH on calcification is reflected in the crystal morphology of this organism. More data are needed to confirm the observed changes in mass of crystal and organic carbon. ?? Author(s) 2009.

Signature of ocean warming in global fisheries catch.

Science.gov (United States)

Cheung, William W L; Watson, Reg; Pauly, Daniel