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Sample records for numerical speciation codes

  1. Different nonideality relationships, different databases and their effects on modeling precipitation from concentrated solutions using numerical speciation codes

    Energy Technology Data Exchange (ETDEWEB)

    Brown, L.F.; Ebinger, M.H.

    1996-08-01

    Four simple precipitation problems are solved to examine the use of numerical equilibrium codes. The study emphasizes concentrated solutions, assumes both ideal and nonideal solutions, and employs different databases and different activity-coefficient relationships. The study uses the EQ3/6 numerical speciation codes. The results show satisfactory material balances and agreement between solubility products calculated from free-energy relationships and those calculated from concentrations and activity coefficients. Precipitates show slightly higher solubilities when the solutions are regarded as nonideal than when considered ideal, agreeing with theory. When a substance may precipitate from a solution dilute in the precipitating substance, a code may or may not predict precipitation, depending on the database or activity-coefficient relationship used. In a problem involving a two-component precipitation, there are only small differences in the precipitate mass and composition between the ideal and nonideal solution calculations. Analysis of this result indicates that this may be a frequent occurrence. An analytical approach is derived for judging whether this phenomenon will occur in any real or postulated precipitation situation. The discussion looks at applications of this approach. In the solutes remaining after the precipitations, there seems to be little consistency in the calculated concentrations and activity coefficients. They do not appear to depend in any coherent manner on the database or activity-coefficient relationship used. These results reinforce warnings in the literature about perfunctory or mechanical use of numerical speciation codes.

  2. Numerical Tokamak Project code comparison

    International Nuclear Information System (INIS)

    Waltz, R.E.; Cohen, B.I.; Beer, M.A.

    1994-01-01

    The Numerical Tokamak Project undertook a code comparison using a set of TFTR tokamak parameters. Local radial annulus codes of both gyrokinetic and gyrofluid types were compared for both slab and toroidal case limits assuming ion temperature gradient mode turbulence in a pure plasma with adiabatic electrons. The heat diffusivities were found to be in good internal agreement within ± 50% of the group average over five codes

  3. On the numerical verification of industrial codes

    International Nuclear Information System (INIS)

    Montan, Sethy Akpemado

    2013-01-01

    Numerical verification of industrial codes, such as those developed at EDF R and D, is required to estimate the precision and the quality of computed results, even more for code running in HPC environments where millions of instructions are performed each second. These programs usually use external libraries (MPI, BLACS, BLAS, LAPACK). In this context, it is required to have a tool as non intrusive as possible to avoid rewriting the original code. In this regard, the CADNA library, which implements the Discrete Stochastic Arithmetic, appears to be one of a promising approach for industrial applications. In the first part of this work, we are interested in an efficient implementation of the BLAS routine DGEMM (General Matrix Multiply) implementing Discrete Stochastic Arithmetic. The implementation of a basic algorithm for matrix product using stochastic types leads to an overhead greater than 1000 for a matrix of 1024 * 1024 compared to the standard version and commercial versions of xGEMM. Here, we detail different solutions to reduce this overhead and the results we have obtained. A new routine Dgemm- CADNA have been designed. This routine has allowed to reduce the overhead from 1100 to 35 compare to optimized BLAS implementations (GotoBLAS). Then, we focus on the numerical verification of Telemac-2D computed results. Performing a numerical validation with the CADNA library shows that more than 30% of the numerical instabilities occurring during an execution come from the dot product function. A more accurate implementation of the dot product with compensated algorithms is presented in this work. We show that implementing these kinds of algorithms, in order to improve the accuracy of computed results does not alter the code performance. (author)

  4. Two modified versions of the speciation code PHREEQE for modelling macromolecule-proton/cation interaction

    International Nuclear Information System (INIS)

    Falck, W.E.

    1991-01-01

    There is a growing need to consider the influence of organic macromolecules on the speciation of ions in natural waters. It is recognized that a simple discrete ligand approach to the binding of protons/cations to organic macromolecules is not appropriate to represent heterogeneities of binding site distributions. A more realistic approach has been incorporated into the speciation code PHREEQE which retains the discrete ligand approach but modifies the binding intensities using an electrostatic (surface complexation) model. To allow for different conformations of natural organic material two alternative concepts have been incorporated: it is assumed that (a) the organic molecules form rigid, impenetrable spheres, and (b) the organic molecules form flat surfaces. The former concept will be more appropriate for molecules in the smaller size range, while the latter will be more representative for larger size molecules or organic surface coatings. The theoretical concept is discussed and the relevant changes to the standard PHREEQE code are explained. The modified codes are called PHREEQEO-RS and PHREEQEO-FS for the rigid-sphere and flat-surface models respectively. Improved output facilities for data transfer to other computers, e.g. the Macintosh, are introduced. Examples where the model is tested against literature data are shown and practical problems are discussed. Appendices contain listings of the modified subroutines GAMMA and PTOT, an example input file and an example command procedure to run the codes on VAX computers

  5. Numerical method improvement for a subchannel code

    Energy Technology Data Exchange (ETDEWEB)

    Ding, W.J.; Gou, J.L.; Shan, J.Q. [Xi' an Jiaotong Univ., Shaanxi (China). School of Nuclear Science and Technology

    2016-07-15

    Previous studies showed that the subchannel codes need most CPU time to solve the matrix formed by the conservation equations. Traditional matrix solving method such as Gaussian elimination method and Gaussian-Seidel iteration method cannot meet the requirement of the computational efficiency. Therefore, a new algorithm for solving the block penta-diagonal matrix is designed based on Stone's incomplete LU (ILU) decomposition method. In the new algorithm, the original block penta-diagonal matrix will be decomposed into a block upper triangular matrix and a lower block triangular matrix as well as a nonzero small matrix. After that, the LU algorithm is applied to solve the matrix until the convergence. In order to compare the computational efficiency, the new designed algorithm is applied to the ATHAS code in this paper. The calculation results show that more than 80 % of the total CPU time can be saved with the new designed ILU algorithm for a 324-channel PWR assembly problem, compared with the original ATHAS code.

  6. Rapid installation of numerical models in multiple parent codes

    Energy Technology Data Exchange (ETDEWEB)

    Brannon, R.M.; Wong, M.K.

    1996-10-01

    A set of``model interface guidelines``, called MIG, is offered as a means to more rapidly install numerical models (such as stress-strain laws) into any parent code (hydrocode, finite element code, etc.) without having to modify the model subroutines. The model developer (who creates the model package in compliance with the guidelines) specifies the model`s input and storage requirements in a standardized way. For portability, database management (such as saving user inputs and field variables) is handled by the parent code. To date, NUG has proved viable in beta installations of several diverse models in vectorized and parallel codes written in different computer languages. A NUG-compliant model can be installed in different codes without modifying the model`s subroutines. By maintaining one model for many codes, MIG facilitates code-to-code comparisons and reduces duplication of effort potentially reducing the cost of installing and sharing models.

  7. The aqueous solubility and speciation analysis for uranium, neptunium and selenium by the geochemical code(EQ3/6)

    International Nuclear Information System (INIS)

    Takeda, Seiji; Shima, Shigeki; Kimura, Hideo; Matsuzuru, Hideo

    1995-11-01

    The geochemical condition of a geologic disposal system of HLW controls the solubility and physicochemical forms of dominant aqueous species for elements, which are one of essential information required for safety assessment. Based on the measured compositions of groundwater, the compositions of groundwater in the disposal system were calculated. The solubility and speciation analyses for the polyvalent elements, uranium, neptunium, and selenium, were performed by the geochemical code EQ3/6. The results obtained were compared with the data appeared in the literatures on the solubilities and speciations. The geochemical behaviors of the elements with respect to the solubility and speciation could quantitatively be elucidated for the compositions of the interstitial waters in an engineered barrier and ground water in a natural barrier. In the pH range of neutral to alkali, the solubilities of U and Np tend to increase with an increase of the carbonate concentration in groundwater. This carbonate concentration dependence of the solubility was also estimated. In the engineered barrier the predominant aqueous species were specified, and in the natural barrier the change of aqueous species was also predicted while the chemical compositions changed from the reducing to oxidizing conditions. The dominant aqueous species for the elements, which migrate in and through the disposal system, were determined by the speciation analysis. (author)

  8. Recent developments in KTF. Code optimization and improved numerics

    International Nuclear Information System (INIS)

    Jimenez, Javier; Avramova, Maria; Sanchez, Victor Hugo; Ivanov, Kostadin

    2012-01-01

    The rapid increase of computer power in the last decade facilitated the development of high fidelity simulations in nuclear engineering allowing a more realistic and accurate optimization as well as safety assessment of reactor cores and power plants compared to the legacy codes. Thermal hydraulic subchannel codes together with time dependent neutron transport codes are the options of choice for an accurate prediction of local safety parameters. Moreover, fast running codes with the best physical models are needed for high fidelity coupled thermal hydraulic / neutron kinetic solutions. Hence at KIT, different subchannel codes such as SUBCHANFLOW and KTF are being improved, validated and coupled with different neutron kinetics solutions. KTF is a subchannel code developed for best-estimate analysis of both Pressurized Water Reactor (PWR) and BWR. It is based on the Pennsylvania State University (PSU) version of COBRA-TF (Coolant Boling in Rod Arrays Two Fluids) named CTF. In this paper, the investigations devoted to the enhancement of the code numeric and informatics structure are presented and discussed. By some examples the gain on code speed-up will be demonstrated and finally an outlook of further activities concentrated on the code improvements will be given. (orig.)

  9. Recent developments in KTF. Code optimization and improved numerics

    Energy Technology Data Exchange (ETDEWEB)

    Jimenez, Javier; Avramova, Maria; Sanchez, Victor Hugo; Ivanov, Kostadin [Karlsruhe Institute of Technology (KIT) (Germany). Inst. for Neutron Physics and Reactor Technology (INR)

    2012-11-01

    The rapid increase of computer power in the last decade facilitated the development of high fidelity simulations in nuclear engineering allowing a more realistic and accurate optimization as well as safety assessment of reactor cores and power plants compared to the legacy codes. Thermal hydraulic subchannel codes together with time dependent neutron transport codes are the options of choice for an accurate prediction of local safety parameters. Moreover, fast running codes with the best physical models are needed for high fidelity coupled thermal hydraulic / neutron kinetic solutions. Hence at KIT, different subchannel codes such as SUBCHANFLOW and KTF are being improved, validated and coupled with different neutron kinetics solutions. KTF is a subchannel code developed for best-estimate analysis of both Pressurized Water Reactor (PWR) and BWR. It is based on the Pennsylvania State University (PSU) version of COBRA-TF (Coolant Boling in Rod Arrays Two Fluids) named CTF. In this paper, the investigations devoted to the enhancement of the code numeric and informatics structure are presented and discussed. By some examples the gain on code speed-up will be demonstrated and finally an outlook of further activities concentrated on the code improvements will be given. (orig.)

  10. Numerical computation of molecular integrals via optimized (vectorized) FORTRAN code

    International Nuclear Information System (INIS)

    Scott, T.C.; Grant, I.P.; Saunders, V.R.

    1997-01-01

    The calculation of molecular properties based on quantum mechanics is an area of fundamental research whose horizons have always been determined by the power of state-of-the-art computers. A computational bottleneck is the numerical calculation of the required molecular integrals to sufficient precision. Herein, we present a method for the rapid numerical evaluation of molecular integrals using optimized FORTRAN code generated by Maple. The method is based on the exploitation of common intermediates and the optimization can be adjusted to both serial and vectorized computations. (orig.)

  11. The usage of numerical code FLASH in plasma astrophysics

    OpenAIRE

    BROŽ, Jaroslav

    2013-01-01

    My diploma thesis is focused on the use of numerical computer codes for simulation in plasma astrophysics. They will learn the basic characteristics of the Sun, a closer focus on the solar corona and the solar corona heating problem. The following section is devoted to simulation software in plasma astrophysics, their installing and displaying the results using the visualization software. In the conclusion is demonstrated using this software on a model example and a simulation that performs s...

  12. Canonical momenta and numerical instabilities in particle codes

    International Nuclear Information System (INIS)

    Godfrey, B.B.

    1975-01-01

    A set of warm plasma dispersion relations appropriate to a large class of electromagnetic plasma simulation codes is derived. The numerical Cherenkov instability is shown by analytic and numerical analysis of these dispersion relations to be the most significant nonphysical effect involving transverse electromagnetic waves. The instability arises due to a spurious phase shift between resonant particles and light waves, caused by a basic incompatibility between the Lagrangian treatment of particle positions and the Eulerian treatment of particle velocities characteristic of most PIC--CIC algorithms. It is demonstrated that, through the use of canonical momentum, this mismatch is alleviated sufficiently to completely eliminate the Cherenkov instability. Collateral effects on simulation accuracy and on other numerical instabilities appear to be minor

  13. Numerical analysis and nuclear standard code application to thermal fatigue

    International Nuclear Information System (INIS)

    Merola, M.

    1992-01-01

    The present work describes the Joint Research Centre Ispra contribution to the IAEA benchmark exercise 'Lifetime Behaviour of the First Wall of Fusion Machines'. The results of the numerical analysis of the reference thermal fatigue experiment are presented. Then a discussion on the numerical analysis of thermal stress is tackled, pointing out its particular aspects in view of their influence on the stress field evaluation. As far as the design-allowable number of cycles are concerned the American nuclear code ASME and the French code RCC-MR are applied and the reasons for the different results obtained are investigated. As regards a realistic fatigue lifetime evaluation, the main problems to be solved are brought out. This work, is intended as a preliminary basis for a discussion focusing on the main characteristics of the thermal fatigue problem from both a numerical and a lifetime assessment point of view. In fact the present margin of discretion left to the analyst may cause undue discrepancies in the results obtained. A sensitivity analysis of the main parameters involved is desirable and more precise design procedures should be stated

  14. Parallelization of a numerical simulation code for isotropic turbulence

    International Nuclear Information System (INIS)

    Sato, Shigeru; Yokokawa, Mitsuo; Watanabe, Tadashi; Kaburaki, Hideo.

    1996-03-01

    A parallel pseudospectral code which solves the three-dimensional Navier-Stokes equation by direct numerical simulation is developed and execution time, parallelization efficiency, load balance and scalability are evaluated. A vector parallel supercomputer, Fujitsu VPP500 with up to 16 processors is used for this calculation for Fourier modes up to 256x256x256 using 16 processors. Good scalability for number of processors is achieved when number of Fourier mode is fixed. For small Fourier modes, calculation time of the program is proportional to NlogN which is ideal complexity of calculation for 3D-FFT on vector parallel processors. It is found that the calculation performance decreases as the increase of the Fourier modes. (author)

  15. A Parallel Numerical Micromagnetic Code Using FEniCS

    Science.gov (United States)

    Nagy, L.; Williams, W.; Mitchell, L.

    2013-12-01

    Many problems in the geosciences depend on understanding the ability of magnetic minerals to provide stable paleomagnetic recordings. Numerical micromagnetic modelling allows us to calculate the domain structures found in naturally occurring magnetic materials. However the computational cost rises exceedingly quickly with respect to the size and complexity of the geometries that we wish to model. This problem is compounded by the fact that the modern processor design no longer focuses on the speed at which calculations are performed, but rather on the number of computational units amongst which we may distribute our calculations. Consequently to better exploit modern computational resources our micromagnetic simulations must "go parallel". We present a parallel and scalable micromagnetics code written using FEniCS. FEniCS is a multinational collaboration involving several institutions (University of Cambridge, University of Chicago, The Simula Research Laboratory, etc.) that aims to provide a set of tools for writing scientific software; in particular software that employs the finite element method. The advantages of this approach are the leveraging of pre-existing projects from the world of scientific computing (PETSc, Trilinos, Metis/Parmetis, etc.) and exposing these so that researchers may pose problems in a manner closer to the mathematical language of their domain. Our code provides a scriptable interface (in Python) that allows users to not only run micromagnetic models in parallel, but also to perform pre/post processing of data.

  16. Development of orthogonal 2-dimensional numerical code TFC2D for fluid flow with various turbulence models and numerical schemes

    Energy Technology Data Exchange (ETDEWEB)

    Park, Ju Yeop; In, Wang Kee; Chun, Tae Hyun; Oh, Dong Seok [Korea Atomic Energy Research Institute, Taejeon (Korea)

    2000-02-01

    The development of orthogonal 2-dimensional numerical code is made. The present code contains 9 kinds of turbulence models that are widely used. They include a standard k-{epsilon} model and 8 kinds of low Reynolds number ones. They also include 6 kinds of numerical schemes including 5 kinds of low order schemes and 1 kind of high order scheme such as QUICK. To verify the present numerical code, pipe flow, channel flow and expansion pipe flow are solved by this code with various options of turbulence models and numerical schemes and the calculated outputs are compared to experimental data. Furthermore, the discretization error that originates from the use of standard k-{epsilon} turbulence model with wall function is much more diminished by introducing a new grid system than a conventional one in the present code. 23 refs., 58 figs., 6 tabs. (Author)

  17. Control rod computer code IAMCOS: general theory and numerical methods

    International Nuclear Information System (INIS)

    West, G.

    1982-11-01

    IAMCOS is a computer code for the description of mechanical and thermal behavior of cylindrical control rods for fast breeders. This code version was applied, tested and modified from 1979 to 1981. In this report are described the basic model (02 version), theoretical definitions and computation methods [fr

  18. Three Dimensional Numerical Code for the Expanding Flat Universe

    Directory of Open Access Journals (Sweden)

    Kyoung W. Min

    1987-12-01

    Full Text Available The current distribution of galaxies may contain clues to the condition of the universe when the galaxies condensed and to the nature of the subsequent expansion of the universe. The development of this large scale structure can be studied by employing N-body computer simulations. The present paper describes the code developed for this purpose. The computer code calculates the motion of collisionless matter action under the force of gravity in an expanding flat universe. The test run of the code shows the error less than 0.5% in 100 iterations.

  19. Numerical analysis of alpha spectra using two different codes

    International Nuclear Information System (INIS)

    Hurtado, S.; Jimenez-Ramos, M.C.; Villa, M.; Vioque, I.; Manjon, G.; Garcia-Tenorio, R.

    2008-01-01

    This work presents an intercomparison between commercial software for alpha-particle spectrometry, Genie 2000, and the new free available software, Winalpha, developed by International Atomic Energy Agency (IAEA). In order to compare both codes, different environmental spectra containing plutonium, uranium, thorium and polonium have been analyzed, together with IAEA test alpha spectra. A statistical study was performed in order to evaluate the precision and accuracy in the analyses, and to enhance the confidence in using the software on alpha spectrometric studies

  20. On the theories, techniques, and computer codes used in numerical reactor criticality and burnup calculations

    International Nuclear Information System (INIS)

    El-Osery, I.A.

    1981-01-01

    The purpose of this paper is to discuss the theories, techniques and computer codes that are frequently used in numerical reactor criticality and burnup calculations. It is a part of an integrated nuclear reactor calculation scheme conducted by the Reactors Department, Inshas Nuclear Research Centre. The crude part in numerical reactor criticality and burnup calculations includes the determination of neutron flux distribution which can be obtained in principle as a solution of Boltzmann transport equation. Numerical methods used for solving transport equations are discussed. Emphasis are made on numerical techniques based on multigroup diffusion theory. These numerical techniques include nodal, modal, and finite difference ones. The most commonly known computer codes utilizing these techniques are reviewed. Some of the main computer codes that have been already developed at the Reactors Department and related to numerical reactor criticality and burnup calculations have been presented

  1. Implicit and semi-implicit schemes in the Versatile Advection Code : numerical tests

    NARCIS (Netherlands)

    Tóth, G.; Keppens, R.; Bochev, Mikhail A.

    1998-01-01

    We describe and evaluate various implicit and semi-implicit time integration schemes applied to the numerical simulation of hydrodynamical and magnetohydrodynamical problems. The schemes were implemented recently in the software package Versatile Advection Code, which uses modern shock capturing

  2. Coding strategies in number space : Memory requirements influence spatial-numerical associations

    NARCIS (Netherlands)

    Lindemann, Oliver; Abolafia, Juan M.; Pratt, Jay; Bekkering, Harold

    The tendency to respond faster with the left hand to relatively small numbers and faster with the right hand to relatively large numbers (spatial numerical association of response codes, SNARC effect) has been interpreted as an automatic association of spatial and numerical information. We

  3. Single-phase multi-dimensional thermohydraulics direct numerical simulation code DINUS-3. Input data description

    Energy Technology Data Exchange (ETDEWEB)

    Muramatsu, Toshiharu [Power Reactor and Nuclear Fuel Development Corp., Oarai, Ibaraki (Japan). Oarai Engineering Center

    1998-08-01

    This report explains the numerical methods and the set-up method of input data for a single-phase multi-dimensional thermohydraulics direct numerical simulation code DINUS-3 (Direct Numerical Simulation using a 3rd-order upwind scheme). The code was developed to simulate non-stationary temperature fluctuation phenomena related to thermal striping phenomena, developed at Power Reactor and Nuclear Fuel Development Corporation (PNC). The DINUS-3 code was characterized by the use of a third-order upwind scheme for convection terms in instantaneous Navier-Stokes and energy equations, and an adaptive control system based on the Fuzzy theory to control time step sizes. Author expect this report is very useful to utilize the DINUS-3 code for the evaluation of various non-stationary thermohydraulic phenomena in reactor applications. (author)

  4. Numerical simulation code for combustion of sodium liquid droplet and its verification

    International Nuclear Information System (INIS)

    Okano, Yasushi

    1997-11-01

    The computer programs for sodium leak and burning phenomena had been developed based on mechanistic approach. Direct numerical simulation code for sodium liquid droplet burning had been developed for numerical analysis of droplet combustion in forced convection air flow. Distributions of heat generation and temperature and reaction rate of chemical productions, such as sodium oxide and hydroxide, are calculated and evaluated with using this numerical code. Extended MAC method coupled with a higher-order upwind scheme had been used for combustion simulation of methane-air mixture. In the numerical simulation code for combustion of sodium liquid droplet, chemical reaction model of sodium was connected with the extended MAC method. Combustion of single sodium liquid droplet was simulated in this report for the verification of developed numerical simulation code. The changes of burning rate and reaction product with droplet diameter and inlet wind velocity were investigated. These calculation results were qualitatively and quantitatively conformed to the experimental and calculation observations in combustion engineering. It was confirmed that the numerical simulation code was available for the calculation of sodium liquid droplet burning. (author)

  5. PAREX, a numerical code in the service of La Hague plant operations

    Energy Technology Data Exchange (ETDEWEB)

    Bisson, J.; Huron, P.; Huel, C. [AREVA NC, La Hague Plant, Technical Direction, 50444, Beaumont-Hague (France); Dinh, B. [CEA, Centre de Marcoule, Nuclear Energy Division, Radiochemistry and Process Department, F-30207, Bagnols-sur-Ceze (France)

    2016-07-01

    The PAREX code developed by the CEA is able to simulate the PUREX process in steady or transient state. From an operator point of view, this numerical code for simulation of liquid-liquid extraction operations is an outstanding tool as an aid for plant operation through process flow sheet optimization, troubleshooting and safety analysis calculations. This paper focuses on two examples. The first concerns the evaluation of the available operating margin of the extraction zone of the first purification cycle flowsheet. The second example concerns a uranium-plutonium splitting operation where the code was used to explain a shift of plutonium concentration in the solvent outlet. (authors)

  6. Determination of Solution Accuracy of Numerical Schemes as Part of Code and Calculation Verification

    Energy Technology Data Exchange (ETDEWEB)

    Blottner, F.G.; Lopez, A.R.

    1998-10-01

    This investigation is concerned with the accuracy of numerical schemes for solving partial differential equations used in science and engineering simulation codes. Richardson extrapolation methods for steady and unsteady problems with structured meshes are presented as part of the verification procedure to determine code and calculation accuracy. The local truncation error de- termination of a numerical difference scheme is shown to be a significant component of the veri- fication procedure as it determines the consistency of the numerical scheme, the order of the numerical scheme, and the restrictions on the mesh variation with a non-uniform mesh. Genera- tion of a series of co-located, refined meshes with the appropriate variation of mesh cell size is in- vestigated and is another important component of the verification procedure. The importance of mesh refinement studies is shown to be more significant than just a procedure to determine solu- tion accuracy. It is suggested that mesh refinement techniques can be developed to determine con- sistency of numerical schemes and to determine if governing equations are well posed. The present investigation provides further insight into the conditions and procedures required to effec- tively use Richardson extrapolation with mesh refinement studies to achieve confidence that sim- ulation codes are producing accurate numerical solutions.

  7. A multiscale numerical algorithm for heat transfer simulation between multidimensional CFD and monodimensional system codes

    Science.gov (United States)

    Chierici, A.; Chirco, L.; Da Vià, R.; Manservisi, S.; Scardovelli, R.

    2017-11-01

    Nowadays the rapidly-increasing computational power allows scientists and engineers to perform numerical simulations of complex systems that can involve many scales and several different physical phenomena. In order to perform such simulations, two main strategies can be adopted: one may develop a new numerical code where all the physical phenomena of interest are modelled or one may couple existing validated codes. With the latter option, the creation of a huge and complex numerical code is avoided but efficient methods for data exchange are required since the performance of the simulation is highly influenced by its coupling techniques. In this work we propose a new algorithm that can be used for volume and/or boundary coupling purposes for both multiscale and multiphysics numerical simulations. The proposed algorithm is used for a multiscale simulation involving several CFD domains and monodimensional loops. We adopt the overlapping domain strategy, so the entire flow domain is simulated with the system code. We correct the system code solution by matching averaged inlet and outlet fields located at the boundaries of the CFD domains that overlap parts of the monodimensional loop. In particular we correct pressure losses and enthalpy values with source-sink terms that are imposed in the system code equations. The 1D-CFD coupling is a defective one since the CFD code requires point-wise values on the coupling interfaces and the system code provides only averaged quantities. In particular we impose, as inlet boundary conditions for the CFD domains, the mass flux and the mean enthalpy that are calculated by the system code. With this method the mass balance is preserved at every time step of the simulation. The coupling between consecutive CFD domains is not a defective one since with the proposed algorithm we can interpolate the field solutions on the boundary interfaces. We use the MED data structure as the base structure where all the field operations are

  8. Improved numerical grid generation techniques for the B2 edge plasma code

    International Nuclear Information System (INIS)

    Stotler, D.P.; Coster, D.P.

    1992-06-01

    Techniques used to generate grids for edge fluid codes such as B2 from numerically computed equilibria are discussed. Fully orthogonal, numerically derived grids closely resembling analytically prescribed meshes can be obtained. But, the details of the poloidal field can vary, yielding significantly different plasma parameters in the simulations. The magnitude of these differences is consistent with the predictions of an analytic model of the scrape-off layer. Both numerical and analytic grids are insensitive to changes in their defining parameters. Methods for implementing nonorthogonal boundaries in these meshes are also presented; they differ slightly from those required for fully orthogonal grids

  9. Numerical code to determine the particle trapping region in the LISA machine

    International Nuclear Information System (INIS)

    Azevedo, M.T. de; Raposo, C.C. de; Tomimura, A.

    1984-01-01

    A numerical code is constructed to determine the trapping region in machine like LISA. The variable magnetic field is two deimensional and is coupled to the Runge-Kutta through the Tchebichev polynomial. Various particle orbits including particle interactions were analysed. Beside this, a strong electric field is introduced to see the possible effects happening inside the plasma. (Author) [pt

  10. Numerical simulations of inertial confinement fusion hohlraum with LARED-integration code

    International Nuclear Information System (INIS)

    Li Jinghong; Li Shuanggui; Zhai Chuanlei

    2011-01-01

    In the target design of the Inertial Confinement Fusion (ICF) program, it is common practice to apply radiation hydrodynamics code to study the key physical processes happened in ICF process, such as hohlraum physics, radiation drive symmetry, capsule implosion physics in the radiation-drive approach of ICF. Recently, many efforts have been done to develop our 2D integrated simulation capability of laser fusion with a variety of optional physical models and numerical methods. In order to effectively integrate the existing codes and to facilitate the development of new codes, we are developing an object-oriented structured-mesh parallel code-supporting infrastructure, called JASMIN. Based on two-dimensional three-temperature hohlraum physics code LARED-H and two-dimensional multi-group radiative transfer code LARED-R, we develop a new generation two-dimensional laser fusion code under the JASMIN infrastructure, which enable us to simulate the whole process of laser fusion from the laser beams' entrance into the hohlraum to the end of implosion. In this paper, we will give a brief description of our new-generation two-dimensional laser fusion code, named LARED-Integration, especially in its physical models, and present some simulation results of holhraum. (author)

  11. Incorporation of the capillary hysteresis model HYSTR into the numerical code TOUGH

    International Nuclear Information System (INIS)

    Niemi, A.; Bodvarsson, G.S.; Pruess, K.

    1991-11-01

    As part of the work performed to model flow in the unsaturated zone at Yucca Mountain Nevada, a capillary hysteresis model has been developed. The computer program HYSTR has been developed to compute the hysteretic capillary pressure -- liquid saturation relationship through interpolation of tabulated data. The code can be easily incorporated into any numerical unsaturated flow simulator. A complete description of HYSTR, including a brief summary of the previous hysteresis literature, detailed description of the program, and instructions for its incorporation into a numerical simulator are given in the HYSTR user's manual (Niemi and Bodvarsson, 1991a). This report describes the incorporation of HYSTR into the numerical code TOUGH (Transport of Unsaturated Groundwater and Heat; Pruess, 1986). The changes made and procedures for the use of TOUGH for hysteresis modeling are documented

  12. Monitoring and preventing numerical oscillations in 3D simulations with coupled Monte Carlo codes

    International Nuclear Information System (INIS)

    Kotlyar, D.; Shwageraus, E.

    2014-01-01

    Highlights: • Conventional coupling methods used in all MC codes can be numerically unstable. • Application of new stochastic implicit (SIMP) methods may be required. • The implicit methods require additional computational effort. • Monitoring diagnostic of the numerical stability was developed here. • The procedure allows to create an hybrid explicit–implicit coupling scheme. - Abstract: Previous studies have reported that different schemes for coupling Monte Carlo (MC) neutron transport with burnup and thermal hydraulic feedbacks may potentially be numerically unstable. This issue can be resolved by application of implicit methods, such as the stochastic implicit mid-point (SIMP) methods. In order to assure numerical stability, the new methods do require additional computational effort. The instability issue however, is problem-dependent and does not necessarily occur in all cases. Therefore, blind application of the unconditionally stable coupling schemes, and thus incurring extra computational costs, may not always be necessary. In this paper, we attempt to develop an intelligent diagnostic mechanism, which will monitor numerical stability of the calculations and, if necessary, switch from simple and fast coupling scheme to more computationally expensive but unconditionally stable one. To illustrate this diagnostic mechanism, we performed a coupled burnup and TH analysis of a single BWR fuel assembly. The results indicate that the developed algorithm can be easily implemented in any MC based code for monitoring of numerical instabilities. The proposed monitoring method has negligible impact on the calculation time even for realistic 3D multi-region full core calculations

  13. Preliminary Numerical Analysis of Convective Heat Transfer Loop Using MARS Code

    Energy Technology Data Exchange (ETDEWEB)

    Lee, Yongjae; Seo, Gwang Hyeok; Jeun, Gyoodong; Kim, Sung Joong [Hanyang Univ., Seoul (Korea, Republic of)

    2014-05-15

    The MARS has been developed adopting two major modules: RELAP5/MOD3 (USA) for one-dimensional (1D) two-fluid model for two-phase flows and COBRA-TF code for a three-dimensional (3D), two-fluid, and three-field model. In addition to the MARS code, TRACE (USA) is a modernized thermal-hydraulics code designed to consolidate and extend the capabilities of NRC's 3 legacy safety code: TRAC-P, TRAC-B and RELAP. CATHARE (French) is also thermal-hydraulic system analysis code for Pressurized Water Reactor (PWR) safety. There are several researches on comparing experimental data with simulation results by the MARS code. Kang et al. conducted natural convection heat transfer experiments of liquid gallium loop, and the experimental data were compared to MARS simulations. Bang et al. examined the capability of the MARS code to predict condensation heat transfer experiments with a vertical tube containing a non-condensable gas. Moreover, Lee et al. adopted MELCOR, which is one of the severe accident analysis codes, to evaluate several strategies for the severe accident mitigation. The objective of this study is to conduct the preliminary numerical analysis for the experimental loop at HYU using the MARS code, especially in order to provide relevant information on upcoming experiments for the undergraduate students. In this study, the preliminary numerical analysis for the convective heat transfer loop was carried out using the MARS Code. The major findings from the numerical simulations can be summarized as follows. In the calculations of the outlet and surface temperatures, the several limitations were suggested for the upcoming single-phase flow experiments. The comparison work for the HTCs shows validity for the prepared input model. This input could give useful information on the experiments. Furthermore, the undergraduate students in department of nuclear engineering, who are going to be taken part in the experiments, could prepare the program with the input, and will

  14. Preliminary Numerical Analysis of Convective Heat Transfer Loop Using MARS Code

    International Nuclear Information System (INIS)

    Lee, Yongjae; Seo, Gwang Hyeok; Jeun, Gyoodong; Kim, Sung Joong

    2014-01-01

    The MARS has been developed adopting two major modules: RELAP5/MOD3 (USA) for one-dimensional (1D) two-fluid model for two-phase flows and COBRA-TF code for a three-dimensional (3D), two-fluid, and three-field model. In addition to the MARS code, TRACE (USA) is a modernized thermal-hydraulics code designed to consolidate and extend the capabilities of NRC's 3 legacy safety code: TRAC-P, TRAC-B and RELAP. CATHARE (French) is also thermal-hydraulic system analysis code for Pressurized Water Reactor (PWR) safety. There are several researches on comparing experimental data with simulation results by the MARS code. Kang et al. conducted natural convection heat transfer experiments of liquid gallium loop, and the experimental data were compared to MARS simulations. Bang et al. examined the capability of the MARS code to predict condensation heat transfer experiments with a vertical tube containing a non-condensable gas. Moreover, Lee et al. adopted MELCOR, which is one of the severe accident analysis codes, to evaluate several strategies for the severe accident mitigation. The objective of this study is to conduct the preliminary numerical analysis for the experimental loop at HYU using the MARS code, especially in order to provide relevant information on upcoming experiments for the undergraduate students. In this study, the preliminary numerical analysis for the convective heat transfer loop was carried out using the MARS Code. The major findings from the numerical simulations can be summarized as follows. In the calculations of the outlet and surface temperatures, the several limitations were suggested for the upcoming single-phase flow experiments. The comparison work for the HTCs shows validity for the prepared input model. This input could give useful information on the experiments. Furthermore, the undergraduate students in department of nuclear engineering, who are going to be taken part in the experiments, could prepare the program with the input, and will

  15. Numerical model for two-dimensional hydrodynamics and energy transport. [VECTRA code

    Energy Technology Data Exchange (ETDEWEB)

    Trent, D.S.

    1973-06-01

    The theoretical basis and computational procedure of the VECTRA computer program are presented. VECTRA (Vorticity-Energy Code for TRansport Analysis) is designed for applying numerical simulation to a broad range of intake/discharge flows in conjunction with power plant hydrological evaluation. The code computational procedure is based on finite-difference approximation of the vorticity-stream function partial differential equations which govern steady flow momentum transport of two-dimensional, incompressible, viscous fluids in conjunction with the transport of heat and other constituents.

  16. Plasmator. A numerical code for simulation of plasma transport in Tokamaks

    International Nuclear Information System (INIS)

    Guasp, J.

    1979-01-01

    Plasmator is a flexible monodimensional numerical code for plasma transport in Tokamaks of circular cross-section, it allows neutral particle transport and impurity effects. The code leaves a total freedom in the analytical form of transport coefficients. It has been writen in Fortran-V for the UNIVAC-1100/80 from JEN and allows for the possibility of graphics for radial profiles and temporal evolution of the main plasma magnitudes, as well in three-dimensional as in two-dimensional representation either on a Calcomp plotter or in the printer. (author)

  17. Numerical verification of equilibrium chemistry software within nuclear fuel performance codes

    International Nuclear Information System (INIS)

    Piro, M.H.; Lewis, B.J.; Thompson, W.T.; Simunovic, S.; Besmann, T.M.

    2010-01-01

    A numerical tool is in an advanced state of development to compute the equilibrium compositions of phases and their proportions in multi-component systems of importance to the nuclear industry. The resulting software is being conceived for direct integration into large multi-physics fuel performance codes, particularly for providing transport source terms, material properties, and boundary conditions in heat and mass transport modules. Consequently, any numerical errors produced in equilibrium chemistry computations will be propagated in subsequent heat and mass transport calculations, thus falsely predicting nuclear fuel behaviour. The necessity for a reliable method to numerically verify chemical equilibrium computations is emphasized by the requirement to handle the very large number of elements necessary to capture the entire fission product inventory. A simple, reliable and comprehensive numerical verification method called the Gibbs Criteria is presented which can be invoked by any equilibrium chemistry solver for quality assurance purposes. (author)

  18. On the Measurements of Numerical Viscosity and Resistivity in Eulerian MHD Codes

    Energy Technology Data Exchange (ETDEWEB)

    Rembiasz, Tomasz; Obergaulinger, Martin; Cerdá-Durán, Pablo; Aloy, Miguel-Ángel [Departamento de Astronomía y Astrofísica, Universidad de Valencia, C/Dr. Moliner 50, E-46100 Burjassot (Spain); Müller, Ewald, E-mail: tomasz.rembiasz@uv.es [Max-Planck-Institut für Astrophysik, Karl-Schwarzschild-Str. 1, D-85748 Garching (Germany)

    2017-06-01

    We propose a simple ansatz for estimating the value of the numerical resistivity and the numerical viscosity of any Eulerian MHD code. We test this ansatz with the help of simulations of the propagation of (magneto)sonic waves, Alfvén waves, and the tearing mode (TM) instability using the MHD code Aenus. By comparing the simulation results with analytical solutions of the resistive-viscous MHD equations and an empirical ansatz for the growth rate of TMs, we measure the numerical viscosity and resistivity of Aenus. The comparison shows that the fast magnetosonic speed and wavelength are the characteristic velocity and length, respectively, of the aforementioned (relatively simple) systems. We also determine the dependence of the numerical viscosity and resistivity on the time integration method, the spatial reconstruction scheme and (to a lesser extent) the Riemann solver employed in the simulations. From the measured results, we infer the numerical resolution (as a function of the spatial reconstruction method) required to properly resolve the growth and saturation level of the magnetic field amplified by the magnetorotational instability in the post-collapsed core of massive stars. Our results show that it is most advantageous to resort to ultra-high-order methods (e.g., the ninth-order monotonicity-preserving method) to tackle this problem properly, in particular, in three-dimensional simulations.

  19. Present capabilities and new developments in antenna modeling with the numerical electromagnetics code NEC

    Energy Technology Data Exchange (ETDEWEB)

    Burke, G.J.

    1988-04-08

    Computer modeling of antennas, since its start in the late 1960's, has become a powerful and widely used tool for antenna design. Computer codes have been developed based on the Method-of-Moments, Geometrical Theory of Diffraction, or integration of Maxwell's equations. Of such tools, the Numerical Electromagnetics Code-Method of Moments (NEC) has become one of the most widely used codes for modeling resonant sized antennas. There are several reasons for this including the systematic updating and extension of its capabilities, extensive user-oriented documentation and accessibility of its developers for user assistance. The result is that there are estimated to be several hundred users of various versions of NEC world wide. 23 refs., 10 figs.

  20. HYDRA-II: A hydrothermal analysis computer code: Volume 1, Equations and numerics

    International Nuclear Information System (INIS)

    McCann, R.A.

    1987-04-01

    HYDRA-II is a hydrothermal computer code capable of three-dimensional analysis of coupled conduction, convection, and thermal radiation problems. This code is especially appropriate for simulating the steady-state performance of spent fuel storage systems. The code has been evaluated for this application for the US Department of Energy's Commercial Spent Fuel Management Program. HYDRA-II provides a finite difference solution in Cartesian coordinates to the equations governing the conservation of mass, momentum, and energy. A cylindrical coordinate system may also be used to enclose the Cartesian coordinate system. This exterior coordinate system is useful for modeling cylindrical cask bodies. The difference equations for conservation of momentum are enhanced by the incorporation of directional porosities and permeabilities that aid in modeling solid structures whose dimensions may be smaller than the computational mesh. The equation for conservation of energy permits of modeling of orthotropic physical properties and film resistances. Several automated procedures are available to model radiation transfer within enclosures and from fuel rod to fuel rod. The documentation of HYDRA-II is presented in three separate volumes. This volume, Volume I - Equations and Numerics, describes the basic differential equations, illustrates how the difference equations are formulated, and gives the solution procedures employed. Volume II - User's Manual contains code flow charts, discusses the code structure, provides detailed instructions for preparing an input file, and illustrates the operation of the code by means of a model problem. The final volume, Volume III - Verification/Validation Assessments, presents results of numerical simulations of single- and multiassembly storage systems and comparisons with experimental data. 4 refs

  1. Numerical relativity for D dimensional axially symmetric space-times: Formalism and code tests

    International Nuclear Information System (INIS)

    Zilhao, Miguel; Herdeiro, Carlos; Witek, Helvi; Nerozzi, Andrea; Sperhake, Ulrich; Cardoso, Vitor; Gualtieri, Leonardo

    2010-01-01

    The numerical evolution of Einstein's field equations in a generic background has the potential to answer a variety of important questions in physics: from applications to the gauge-gravity duality, to modeling black hole production in TeV gravity scenarios, to analysis of the stability of exact solutions, and to tests of cosmic censorship. In order to investigate these questions, we extend numerical relativity to more general space-times than those investigated hitherto, by developing a framework to study the numerical evolution of D dimensional vacuum space-times with an SO(D-2) isometry group for D≥5, or SO(D-3) for D≥6. Performing a dimensional reduction on a (D-4) sphere, the D dimensional vacuum Einstein equations are rewritten as a 3+1 dimensional system with source terms, and presented in the Baumgarte, Shapiro, Shibata, and Nakamura formulation. This allows the use of existing 3+1 dimensional numerical codes with small adaptations. Brill-Lindquist initial data are constructed in D dimensions and a procedure to match them to our 3+1 dimensional evolution equations is given. We have implemented our framework by adapting the Lean code and perform a variety of simulations of nonspinning black hole space-times. Specifically, we present a modified moving puncture gauge, which facilitates long-term stable simulations in D=5. We further demonstrate the internal consistency of the code by studying convergence and comparing numerical versus analytic results in the case of geodesic slicing for D=5, 6.

  2. Nuclear Reactor Component Code CUPID-I: Numerical Scheme and Preliminary Assessment Results

    International Nuclear Information System (INIS)

    Cho, Hyoung Kyu; Jeong, Jae Jun; Park, Ik Kyu; Kim, Jong Tae; Yoon, Han Young

    2007-12-01

    A component scale thermal hydraulic analysis code, CUPID (Component Unstructured Program for Interfacial Dynamics), is being developed for the analysis of components of a nuclear reactor, such as reactor vessel, steam generator, containment, etc. It adopted three-dimensional, transient, two phase and three-field model. In order to develop the numerical schemes for the three-field model, various numerical schemes have been examined including the SMAC, semi-implicit ICE, SIMPLE, Row Scheme and so on. Among them, the ICE scheme for the three-field model was presented in the present report. The CUPID code is utilizing unstructured mesh for the simulation of complicated geometries of the nuclear reactor components. The conventional ICE scheme that was applied to RELAP5 and COBRA-TF, therefore, were modified for the application to the unstructured mesh. Preliminary calculations for the unstructured semi-implicit ICE scheme have been conducted for a verification of the numerical method from a qualitative point of view. The preliminary calculation results showed that the present numerical scheme is robust and efficient for the prediction of phase changes and flow transitions due to a boiling and a flashing. These calculation results also showed the strong coupling between the pressure and void fraction changes. Thus, it is believed that the semi-implicit ICE scheme can be utilized for transient two-phase flows in a component of a nuclear reactor

  3. Nuclear Reactor Component Code CUPID-I: Numerical Scheme and Preliminary Assessment Results

    Energy Technology Data Exchange (ETDEWEB)

    Cho, Hyoung Kyu; Jeong, Jae Jun; Park, Ik Kyu; Kim, Jong Tae; Yoon, Han Young

    2007-12-15

    A component scale thermal hydraulic analysis code, CUPID (Component Unstructured Program for Interfacial Dynamics), is being developed for the analysis of components of a nuclear reactor, such as reactor vessel, steam generator, containment, etc. It adopted three-dimensional, transient, two phase and three-field model. In order to develop the numerical schemes for the three-field model, various numerical schemes have been examined including the SMAC, semi-implicit ICE, SIMPLE, Row Scheme and so on. Among them, the ICE scheme for the three-field model was presented in the present report. The CUPID code is utilizing unstructured mesh for the simulation of complicated geometries of the nuclear reactor components. The conventional ICE scheme that was applied to RELAP5 and COBRA-TF, therefore, were modified for the application to the unstructured mesh. Preliminary calculations for the unstructured semi-implicit ICE scheme have been conducted for a verification of the numerical method from a qualitative point of view. The preliminary calculation results showed that the present numerical scheme is robust and efficient for the prediction of phase changes and flow transitions due to a boiling and a flashing. These calculation results also showed the strong coupling between the pressure and void fraction changes. Thus, it is believed that the semi-implicit ICE scheme can be utilized for transient two-phase flows in a component of a nuclear reactor.

  4. Sympatric Speciation in Threespine Stickleback: Why Not?

    Directory of Open Access Journals (Sweden)

    Daniel I. Bolnick

    2011-01-01

    Full Text Available Numerous theoretical models suggest that sympatric speciation is possible when frequency-dependent interactions such as intraspecific competition drive disruptive selection on a trait that is also subject to assortative mating. Here, I review recent evidence that both conditions are met in lake populations of threespine stickleback (Gasterosteus aculeatus. Nonetheless, sympatric speciation appears to be rare or absent in stickleback. If stickleback qualitatively fit the theoretical requirements for sympatric speciation, why do they not undergo sympatric speciation? I present simulations showing that disruptive selection and assortative mating in stickleback, though present, are too weak to drive speciation. Furthermore, I summarize empirical evidence that disruptive selection in stickleback drives other forms of evolutionary diversification (plasticity, increased trait variance, and sexual dimorphism instead of speciation. In conclusion, core assumptions of sympatric speciation theory seem to be qualitatively reasonable for stickleback, but speciation may nevertheless fail because of (i quantitative mismatches with theory and (ii alternative evolutionary outcomes.

  5. Numerical algorithms for intragranular diffusional fission gas release incorporated in the Transuranus code

    International Nuclear Information System (INIS)

    Lassmann, K.

    2002-01-01

    Complicated physical processes govern diffusional fission gas release in nuclear fuels. In addition to the physical problem there exists a numerical problem, as some solutions of the underlying diffusion equation contain numerical errors that by far exceed the physical details. In this paper the two algorithms incorporated in the TRANSURANUS code, the URGAS and the new FORMAS algorithm are compared. The previously reported deficiency of the most elegant and mathematically sound FORMAS algorithm at low release could be overcome. Both algorithms are simple, fast, without numerical problems, insensitive to time step lengths and well balanced over the entire range of fission gas release. They can be made available on request as FORTRAN subroutines. (author)

  6. Integration of the metal ion charge neutralization model for humic acid complexation into the geochemical speciation code EQ3/6

    International Nuclear Information System (INIS)

    Brendler, V.

    2002-01-01

    Geochemical modeling often requires the consideration of humics as major complexing agent and colloid. The metal ion charge neutralization model can handle respective interactions and has therefore been integrated into the speciation software EQ3/6. An application showing the influence of the pH-dependence of the loading capacity on actinide speciation is given. (orig.)

  7. Integrated Numerical Experiments (INEX) and the Free-Electron Laser Physical Process Code (FELPPC)

    International Nuclear Information System (INIS)

    Thode, L.E.; Chan, K.C.D.; Schmitt, M.J.; McKee, J.; Ostic, J.; Elliott, C.J.; McVey, B.D.

    1990-01-01

    The strong coupling of subsystem elements, such as the accelerator, wiggler, and optics, greatly complicates the understanding and design of a free electron laser (FEL), even at the conceptual level. To address the strong coupling character of the FEL the concept of an Integrated Numerical Experiment (INEX) was proposed. Unique features of the INEX approach are consistency and numerical equivalence of experimental diagnostics. The equivalent numerical diagnostics mitigates the major problem of misinterpretation that often occurs when theoretical and experimental data are compared. The INEX approach has been applied to a large number of accelerator and FEL experiments. Overall, the agreement between INEX and the experiments is very good. Despite the success of INEX, the approach is difficult to apply to trade-off and initial design studies because of the significant manpower and computational requirements. On the other hand, INEX provides a base from which realistic accelerator, wiggler, and optics models can be developed. The Free Electron Laser Physical Process Code (FELPPC) includes models developed from INEX, provides coupling between the subsystem models, and incorporates application models relevant to a specific trade-off or design study. In other words, FELPPC solves the complete physical process model using realistic physics and technology constraints. Because FELPPC provides a detailed design, a good estimate for the FEL mass, cost, and size can be made from a piece-part count of the FEL. FELPPC requires significant accelerator and FEL expertise to operate. The code can calculate complex FEL configurations including multiple accelerator and wiggler combinations

  8. Numerical simulation of a short RFQ resonator using the MAFIA codes

    International Nuclear Information System (INIS)

    Wang, H.; Ben-Zvi, I.; Jain, A.; Paul, P.; Lombardi, A.

    1991-01-01

    The electrical characteristics of a short (2βλ=0.4 m) resonator with large modulation (m=4) have been studied using the three dimensional codes, MAFIA. The complete resonator, including the modulated electrodes and a complex support structure, has been simulated using ∼ 350,000 mesh points. Important characteristics studied include the resonant frequency, electric and magnetic fields distributions, quality factor and stored energy. The results of the numerical simulations are compared with the measurements of an actual resonator and analytical approximations. 7 refs., 3 figs., 1 tab

  9. Numerical scheme of WAHA code for simulation of fast transients in piping systems

    International Nuclear Information System (INIS)

    Iztok Tiselj

    2005-01-01

    Full text of publication follows: A research project of the 5. EU program entitled 'Two-phase flow water hammer transients and induced loads on materials and structures of nuclear power plants' (WAHA loads) has been initiated in Fall 2000 and ended in Spring 2004. Numerical scheme used in WAHA code is responsibility of 'Jozef Stefan Institute and is briefly described in the present work. Mathematical model is based on a 6-equation two-fluid model for inhomogeneous non-equilibrium two-phase flow, which can be written in vectorial form as: A δΨ-vector/δt + B δΨ-vector/δx = S-vector. Hyperbolicity of the equations is a prerequisite and is ensured with virtual mass term and interfacial pressure term, however, equations are not unconditionally hyperbolic. Flow-regime map used in WAHA code consists of dispersed, and horizontally stratified flow correlations. The closure laws describe interface heat and mass transfer (condensation model, flashing...), the inter-phase friction, and wall friction. For the modeling of water hammer additional terms due to the pipe elasticity are considered. For the calculation of the thermodynamic state a new set of water properties subroutines was created. Numerical scheme of the WAHA code is based on Godunov characteristic upwind methods. Advanced numerical methods based on high-resolution shock-capturing schemes, which were originally developed for high-speed gas dynamics are used. These schemes produce solutions with a substantially reduced numerical diffusion and allow the accurate modeling of flow discontinuities. Code is using non-conservative variables Ψ-vector = (p, α, ν f , ν g , u f , u g ), however, according to current experience, the non-conservation is not a major problem for the fast transients like water hammers. The following operator splitting is used in the code: 1) Convection and non-relaxation source terms: A δΨ-vector/δt + B δΨ-vector/δx S-vector non relaxation 2) Relaxation (inter-phase exchange) source

  10. Validations of BWR nuclear design code using ABWR MOX numerical benchmark problems

    International Nuclear Information System (INIS)

    Takano, Shou; Sasagawa, Masaru; Yamana, Teppei; Ikehara, Tadashi; Yanagisawa, Naoki

    2017-01-01

    BWR core design code package (the HINES assembly code and the PANACH core simulator), being used for full MOX-ABWR core design, has been benchmarked against the high-fidelity numerical solutions as references, for the purpose of validating its capability of predicting the BWR core design parameters systematically from UO 2 to 100% MOX cores. The reference solutions were created by whole core critical calculations using MCNPs with the precisely modeled ABWR cores both in hot and cold conditions at BOC and EOC of the equilibrium cycle. A Doppler-Broadening Rejection Correction (DCRB) implemented MCNP5-1.4 with ENDF/B-VII.0 was mainly used to evaluate the core design parameters, except for effective delayed neutron fraction (β eff ) and prompt neutron lifetime (l) with MCNP6.1. The discrepancies in the results between the design codes HINES-PANACH and MCNPs for the core design parameters such as the bundle powers, hot pin powers, control rod worth, boron worth, void reactivity, Doppler reactivity, β eff and l, are almost within target accuracy, leading to the conclusion that HINES-PANACH has sufficient fidelity for application to full MOX-ABWR core design. (author)

  11. Numerical spin tracking in a synchrotron computer code Spink: Examples (RHIC)

    International Nuclear Information System (INIS)

    Luccio, A.

    1995-01-01

    In the course of acceleration of polarized protons in a synchrotron, many depolarizing resonances are encountered. They are classified in two categories: Intrinsic resonances that depend on the lattice structure of the ring and arise from the coupling of betatron oscillations with horizontal magnetic fields, and imperfection resonances caused by orbit distortions due to field errors. In general, the spectrum of resonances vs spin tune Gγ(G = 1.7928, the proton gyromagnetic anomaly, and y the proton relativistic energy ratio) for a given lattice tune ν, or vs ν for a given Gγ, contains a multitude of lines with various amplitudes or resonance strengths. The depolarization due to the resonance lines can be studied by numerically tracking protons with spin in a model accelerator. Tracking will allow one to check the strength of resonances, to study the effects of devices like Siberian Snakes, to find safe lattice tune regions where to operate, and finally to study in detail the operation of special devices such as Spin Flippers. A few computer codes exist that calculate resonance strengths E k and perform tracking, for proton and electron machines. Most relevant to our work for the AGS and RHIC machines are the programs Depol and Snake. Depol, calculates the E k 's by Fourier analysis. The input to Depol is the output of a machine model code, such as Synch or Mad, containing all details of the lattice. Snake, does the tracking, starting from a synthetic machine, that contains a certain number of periods, of FODO cells, of Siberian snakes, etc. We believed the complexities of machines like the AGS or RHIC could not be adequately represented by Snake. Then, we decided to write a new code, Spink, that combines some of the features of Depol and Snake. I.E., Spink reads a Mad output like Depol and tracks as Snake does. The structure of the code and examples for RHIC are described in the following

  12. Development of the Monju core safety analysis numerical models by super-COPD code

    International Nuclear Information System (INIS)

    Yamada, Fumiaki; Minami, Masaki

    2010-12-01

    Japan Atomic Energy Agency constructed a computational model for safety analysis of Monju reactor core to be built into a modularized plant dynamics analysis code Super-COPD code, for the purpose of heat removal capability evaluation at the in total 21 defined transients in the annex to the construction permit application. The applicability of this model to core heat removal capability evaluation has been estimated by back to back result comparisons of the constituent models with conventionally applied codes and by application of the unified model. The numerical model for core safety analysis has been built based on the best estimate model validated by the actually measured plant behavior up to 40% rated power conditions, taking over safety analysis models of conventionally applied COPD and HARHO-IN codes, to be capable of overall calculations of the entire plant with the safety protection and control systems. Among the constituents of the analytical model, neutronic-thermal model, heat transfer and hydraulic models of PHTS, SHTS, and water/steam system are individually verified by comparisons with the conventional calculations. Comparisons are also made with the actually measured plant behavior up to 40% rated power conditions to confirm the calculation adequacy and conservativeness of the input data. The unified analytical model was applied to analyses of in total 8 anomaly events; reactivity insertion, abnormal power distribution, decrease and increase of coolant flow rate in PHTS, SHTS and water/steam systems. The resulting maximum values and temporal variations of the key parameters in safety evaluation; temperatures of fuel, cladding, in core sodium coolant and RV inlet and outlet coolant have negligible discrepancies against the existing analysis result in the annex to the construction permit application, verifying the unified analytical model. These works have enabled analytical evaluation of Monju core heat removal capability by Super-COPD utilizing the

  13. Near-fault earthquake ground motion prediction by a high-performance spectral element numerical code

    International Nuclear Information System (INIS)

    Paolucci, Roberto; Stupazzini, Marco

    2008-01-01

    Near-fault effects have been widely recognised to produce specific features of earthquake ground motion, that cannot be reliably predicted by 1D seismic wave propagation modelling, used as a standard in engineering applications. These features may have a relevant impact on the structural response, especially in the nonlinear range, that is hard to predict and to be put in a design format, due to the scarcity of significant earthquake records and of reliable numerical simulations. In this contribution a pilot study is presented for the evaluation of seismic ground-motions in the near-fault region, based on a high-performance numerical code for 3D seismic wave propagation analyses, including the seismic fault, the wave propagation path and the near-surface geological or topographical irregularity. For this purpose, the software package GeoELSE is adopted, based on the spectral element method. The set-up of the numerical benchmark of 3D ground motion simulation in the valley of Grenoble (French Alps) is chosen to study the effect of the complex interaction between basin geometry and radiation mechanism on the variability of earthquake ground motion

  14. The 1963 Vajont landslide (Italy) simulated through a numerical 2D code

    Science.gov (United States)

    Zaniboni, Filippo; Ausilia Paparo, Maria; Elsen, Katharina; Tinti, Stefano

    2013-04-01

    On October 9th, 1963, a huge mass of about 260 million m3 collapsed along Mt. Toc flank into the artificial lake called Vajont and generated a gigantic wave that invested the town of Longarone (North-East Italy, about 100 km north of Venice), provoking about 2000 casualties. The event started a public debate on the responsibilities for the disaster, and also raised crucial issues for the scientific and engineering community, regarding reservoir flank instability and safety of the hydroelectric plant. The peculiar features of the event were immediately evident. The clay layers remained uncovered in the upper part of the detachment niche, supporting the hypothesis of a well-defined pre-existing sliding surface, that could explain the high falling velocity (around 20 m/s as a maximum) and the compactness of the deposit layers that were found to sit almost unperturbed on the bottom of the valley. The numerical study presented here contributes to the understanding of dynamics of the Vajont landslide. It is found that the accurate knowledge of the pre- and post-slide morphology provides tight constraints on the parameters of the numerical model, that are tuned to fit the observed deposit. Numerical simulations are carried out by means of the in-house built code UBO-BLOCK2. The initial sliding body is divided into a mesh of interacting volume-conserving blocks, whose motion is computed numerically. The friction coefficient at the base of the landslide is determined through a best fit search by maximizing the degree of overlapping between the calculated and observed deposits. Our best solution is also able to account for the observed slight easterly rotation of the mass, the different behaviors of the eastern and western part of the sliding surface and the retrogressive motion of the slide that after climbing up the opposite flank of the valley reverted velocity to settle down on the bottom of the valley.

  15. Development of numerical solution techniques in the KIKO3D code

    International Nuclear Information System (INIS)

    Panka, Istvan; Kereszturi, Andras; Hegedus, Csaba

    2005-01-01

    The paper describes the numerical methods applied in KIKO3D three-dimensional reactor dynamics code and present a new, more effective method (Bi-CGSTAB) for accelerating the large sparse matrix equation solution. The convergence characteristics were investigated in a given macro time step of a Control Rod Ejection transient. The results obtained by the old GMRES and new Bi-CGSTAB methods are compared. It is concluded that the real relative errors of the solutions obtained by GMRES or Bi - CGSTAB algorithms are in fact closer together than the estimated relative errors. The KIKO3D-Bi-CGSTAB method converges safely and it is 7-12 % faster than the old KIKO3D-GMRES solution (Authors)

  16. A physiologically-inspired model of numerical classification based on graded stimulus coding

    Directory of Open Access Journals (Sweden)

    John Pearson

    2010-01-01

    Full Text Available In most natural decision contexts, the process of selecting among competing actions takes place in the presence of informative, but potentially ambiguous, stimuli. Decisions about magnitudes—quantities like time, length, and brightness that are linearly ordered—constitute an important subclass of such decisions. It has long been known that perceptual judgments about such quantities obey Weber’s Law, wherein the just-noticeable difference in a magnitude is proportional to the magnitude itself. Current physiologically inspired models of numerical classification assume discriminations are made via a labeled line code of neurons selectively tuned for numerosity, a pattern observed in the firing rates of neurons in the ventral intraparietal area (VIP of the macaque. By contrast, neurons in the contiguous lateral intraparietal area (LIP signal numerosity in a graded fashion, suggesting the possibility that numerical classification could be achieved in the absence of neurons tuned for number. Here, we consider the performance of a decision model based on this analog coding scheme in a paradigmatic discrimination task—numerosity bisection. We demonstrate that a basic two-neuron classifier model, derived from experimentally measured monotonic responses of LIP neurons, is sufficient to reproduce the numerosity bisection behavior of monkeys, and that the threshold of the classifier can be set by reward maximization via a simple learning rule. In addition, our model predicts deviations from Weber Law scaling of choice behavior at high numerosity. Together, these results suggest both a generic neuronal framework for magnitude-based decisions and a role for reward contingency in the classification of such stimuli.

  17. Numerical simulation of fragmentation of hot metal and oxide melts with the computer code IVA3

    International Nuclear Information System (INIS)

    Mussa, S.; Tromm, W.

    1994-01-01

    The phenomena of fragmentation of melts caused by water-inlet from the bottom with the computer code IVA3/11,12,13/ are investigated. With the computer code IVA3 three-component-multiphase flows can be numerically simulated. Two geometrical models are used. Both consist of a cylindrical vessel for water lying beneath a cylindrical vessel for melt. The vessels are connected to each other through a hole. Steel and UO 2 melts are. The following parameters were varied: the type of the melt (steel,UO 2 ), the water supply pressure and the geometry of the hole in the bottom plate through which the water and melt vessels are connected. As results of the numerical simulations temperature and pressure versus time curves are plotted. Additionally the volume flow rates and the volume fractions of the various phases in the vessels and the increase in surface and enthalpy of the melt during the time of simulation are depicted. With steel melts the rate of fragmentation increases with increasing water pressure and melt temperature, whereby stable channels are formed in the melt layer showing a very low flow resistance for steam. With UO 2 the formations of channels are also observed. However, these channels are not so stable that they eventually break apart and lead to the fragmentation of the UO 2 melt in drops. The fragmentation of the steel melt in water vessel is less than that of UO 2 . No essential solidification of the melt is observed in the respective duration of the simulations. However, a small drop in the melt temperature is observed. With a slight or no water pressure the melt flows from the upper vessel into the water vessel via the connecting hole. The processes take place in a very slow manner and with such a low steam production so that despite the occuring pressure peaks no sign of steam explosions could be observed. (orig./HP) [de

  18. Comparison of two numerical modelling codes for hydraulic and transport calculations in the near-field

    International Nuclear Information System (INIS)

    Kalin, J.; Petkovsek, B.; Montarnal, Ph.; Genty, A.; Deville, E.; Krivic, J.; Ratej, J.

    2011-01-01

    In the past years the Slovenian Performance Analysis/Safety Assessment team has performed many generic studies for the future Slovenian low and intermediate level waste repository, most recently a Special Safety Analysis for the Krsko site. The modelling approach was to split the problem into three parts: near-field (detailed model of the repository), far-field (i.e., geosphere) and biosphere. In the Special Safety Analysis the code used to perform the near-field calculations was Hydrus2D. Recently the team has begun a cooperation with the French Commisariat al'Energie Atomique/Saclay (CEA/Saclay) and, as a part of this cooperation, began investigations into using the Alliances numerical platform for near-field calculations in order to compare the overall approach and calculated results. The article presents the comparison between these two codes for a silo-type repository that was considered in the Special Safety Analysis. The physical layout and characteristics of the repository are presented and a hydraulic and transport model of the repository is developed and implemented in Alliances. Some analysis of sensitivity to mesh fineness and to simulation timestep has been preformed and is also presented. The compared quantity is the output flux of radionuclides on the boundary of the model. Finally the results from Hydrus2D and Alliances are compared and the differences and similarities are commented.

  19. Comparison of two numerical modelling codes for hydraulic and transport calculations in the near-field

    Energy Technology Data Exchange (ETDEWEB)

    Kalin, J., E-mail: jan.kalin@zag.s [Slovenian National Building and Civil Engineering Institute, Dimiceva 12, SI-1000 Ljubljana (Slovenia); Petkovsek, B., E-mail: borut.petkovsek@zag.s [Slovenian National Building and Civil Engineering Institute, Dimiceva 12, SI-1000 Ljubljana (Slovenia); Montarnal, Ph., E-mail: philippe.montarnal@cea.f [CEA/Saclay, DM2S/SFME/LSET, Gif-sur-Yvette, 91191 cedex (France); Genty, A., E-mail: alain.genty@cea.f [CEA/Saclay, DM2S/SFME/LSET, Gif-sur-Yvette, 91191 cedex (France); Deville, E., E-mail: estelle.deville@cea.f [CEA/Saclay, DM2S/SFME/LSET, Gif-sur-Yvette, 91191 cedex (France); Krivic, J., E-mail: jure.krivic@geo-zs.s [Geological Survey of Slovenia, Dimiceva 14, SI-1000 Ljubljana (Slovenia); Ratej, J., E-mail: joze.ratej@geo-zs.s [Geological Survey of Slovenia, Dimiceva 14, SI-1000 Ljubljana (Slovenia)

    2011-04-15

    In the past years the Slovenian Performance Analysis/Safety Assessment team has performed many generic studies for the future Slovenian low and intermediate level waste repository, most recently a Special Safety Analysis for the Krsko site. The modelling approach was to split the problem into three parts: near-field (detailed model of the repository), far-field (i.e., geosphere) and biosphere. In the Special Safety Analysis the code used to perform the near-field calculations was Hydrus2D. Recently the team has begun a cooperation with the French Commisariat al'Energie Atomique/Saclay (CEA/Saclay) and, as a part of this cooperation, began investigations into using the Alliances numerical platform for near-field calculations in order to compare the overall approach and calculated results. The article presents the comparison between these two codes for a silo-type repository that was considered in the Special Safety Analysis. The physical layout and characteristics of the repository are presented and a hydraulic and transport model of the repository is developed and implemented in Alliances. Some analysis of sensitivity to mesh fineness and to simulation timestep has been preformed and is also presented. The compared quantity is the output flux of radionuclides on the boundary of the model. Finally the results from Hydrus2D and Alliances are compared and the differences and similarities are commented.

  20. Methods tuned on the physical problem. A way to improve numerical codes

    International Nuclear Information System (INIS)

    Ixaru, L.Gr.

    2010-01-01

    We consider the problem on how the numerical methods tuned on the physical problem can contribute to the enhancement of the performance of the codes. We illustrate this on two simple cases: solution of time independent one-dimensional Schroedinger equation, and the computation of integrals with oscillatory integrands. In both cases the tuned versions bring a massive gain in accuracy at negligible extra cost. We presented two simple problems where successive levels of tuning enhance significantly the accuracy at negligible extra cost. These problems should be seen as representing only some illustrations on how the codes can be improved but we must also mention that in many cases tuned versions still have to be developed. Just for a suggestion, quadrature formulae which involve the integrand and a number of successive derivatives of this exist, but no formula is available when some of these derivatives are missing, for example when we dispose of y and y'' but not of y'. A direct application will be on the case when the integrand involves the solution of the Schrodinger equation by the method of Numerov. (author)

  1. Numerical optimization of the ramp-down phase with the RAPTOR code

    Science.gov (United States)

    Teplukhina, Anna; Sauter, Olivier; Felici, Federico; The Tcv Team; The ASDEX-Upgrade Team; The Eurofusion Mst1 Team

    2017-10-01

    The ramp-down optimization goal in this work is defined as the fastest possible decrease of a plasma current while avoiding any disruptions caused by reaching physical or technical limits. Numerical simulations and preliminary experiments on TCV and AUG have shown that a fast decrease of plasma elongation and an adequate timing of the H-L transition during current ramp-down can help to avoid reaching high values of the plasma internal inductance. The RAPTOR code (F. Felici et al., 2012 PPCF 54; F. Felici, 2011 EPFL PhD thesis), developed for real-time plasma control, has been used for an optimization problem solving. Recently the transport model has been extended to include the ion temperature and electron density transport equations in addition to the electron temperature and current density transport equations, increasing the physical applications of the code. The gradient-based models for the transport coefficients (O. Sauter et al., 2014 PPCF 21; D. Kim et al., 2016 PPCF 58) have been implemented to RAPTOR and tested during this work. Simulations of the AUG and TCV entire plasma discharges will be presented. See the author list of S. Coda et al., Nucl. Fusion 57 2017 102011.

  2. Development of non-orthogonal and 2-dimensional numerical code TFC2D-BFC for fluid flow

    International Nuclear Information System (INIS)

    Park, Ju Yeop; In, Wang Kee; Chun, Tae Hyun; Oh, Dong Seok

    2000-09-01

    The development of algorithm for three dimensional non-orthogonal coordinate system has been made. The algorithm adopts a non-staggered grid system, Cartesian velocity components for independent variables of momentum equations and a SIMPLER algorithm for a pressure correction equation. Except the pressure correction method, the selected grid system and the selected independent variables for momentum equations have been widely used in a commercial code. It is well known that the SIMPLER is superior to the SIMPLE algorithm in the view of convergence rate. Using this algorithm, a two dimensional non-orthogonal numerical code has been completed. The code adopts a structured single square block in a computational domain with a uniform mesh interval. Consequently, any solid body existing in a flow field can be implemented in the numerical code through a blocked-off method which was devised by Patankar

  3. Numerical Simulations of Slow Stick Slip Events with PFC, a DEM Based Code

    Science.gov (United States)

    Ye, S. H.; Young, R. P.

    2017-12-01

    Nonvolcanic tremors around subduction zone have become a fascinating subject in seismology in recent years. Previous studies have shown that the nonvolcanic tremor beneath western Shikoku is composed of low frequency seismic waves overlapping each other. This finding provides direct link between tremor and slow earthquakes. Slow stick slip events are considered to be laboratory scaled slow earthquakes. Slow stick slip events are traditionally studied with direct shear or double direct shear experiment setup, in which the sliding velocity can be controlled to model a range of fast and slow stick slips. In this study, a PFC* model based on double direct shear is presented, with a central block clamped by two side blocks. The gauge layers between the central and side blocks are modelled as discrete fracture networks with smooth joint bonds between pairs of discrete elements. In addition, a second model is presented in this study. This model consists of a cylindrical sample subjected to triaxial stress. Similar to the previous model, a weak gauge layer at a 45 degrees is added into the sample, on which shear slipping is allowed. Several different simulations are conducted on this sample. While the confining stress is maintained at the same level in different simulations, the axial loading rate (displacement rate) varies. By varying the displacement rate, a range of slipping behaviour, from stick slip to slow stick slip are observed based on the stress-strain relationship. Currently, the stick slip and slow stick slip events are strictly observed based on the stress-strain relationship. In the future, we hope to monitor the displacement and velocity of the balls surrounding the gauge layer as a function of time, so as to generate a synthetic seismogram. This will allow us to extract seismic waveforms and potentially simulate the tremor-like waves found around subduction zones. *Particle flow code, a discrete element method based numerical simulation code developed by

  4. MIG version 0.0 model interface guidelines: Rules to accelerate installation of numerical models into any compliant parent code

    Energy Technology Data Exchange (ETDEWEB)

    Brannon, R.M.; Wong, M.K.

    1996-08-01

    A set of model interface guidelines, called MIG, is presented as a means by which any compliant numerical material model can be rapidly installed into any parent code without having to modify the model subroutines. Here, {open_quotes}model{close_quotes} usually means a material model such as one that computes stress as a function of strain, though the term may be extended to any numerical operation. {open_quotes}Parent code{close_quotes} means a hydrocode, finite element code, etc. which uses the model and enforces, say, the fundamental laws of motion and thermodynamics. MIG requires the model developer (who creates the model package) to specify model needs in a standardized but flexible way. MIG includes a dictionary of technical terms that allows developers and parent code architects to share a common vocabulary when specifying field variables. For portability, database management is the responsibility of the parent code. Input/output occurs via structured calling arguments. As much model information as possible (such as the lists of required inputs, as well as lists of precharacterized material data and special needs) is supplied by the model developer in an ASCII text file. Every MIG-compliant model also has three required subroutines to check data, to request extra field variables, and to perform model physics. To date, the MIG scheme has proven flexible in beta installations of a simple yield model, plus a more complicated viscodamage yield model, three electromechanical models, and a complicated anisotropic microcrack constitutive model. The MIG yield model has been successfully installed using identical subroutines in three vectorized parent codes and one parallel C++ code, all predicting comparable results. By maintaining one model for many codes, MIG facilitates code-to-code comparisons and reduces duplication of effort, thereby reducing the cost of installing and sharing models in diverse new codes.

  5. Synthesis of the scientific French speaking days on numerical codes in radiation protection, in radio physics and in dosimetry

    International Nuclear Information System (INIS)

    Paul, D.; Makovicka, L.; Ricard, M.

    2005-01-01

    Synthesis of the scientific French speaking days on numerical codes in radiation protection, in radio-physics and in dosimetry. The paper carries the title of 'French speaking' scientific days co-organized on October 2-3, 2003 in Sochaux by the SFRP, SFPM and FIRAM societies. It has for objective to establish the scientific balance sheet of this international event, to give the synthesis of current tendencies in the field of the development and of the use of the numerical codes in radiation protection, in radio-physics and in dosimetry. (author)

  6. Numerical verification/validation of the theory of coupled reactors for deuterium critical assembly, using MCNP5 and Serpent codes

    International Nuclear Information System (INIS)

    Hussein, M.S; Lewis, B.J.; Bonin, H.W.

    2013-01-01

    The theory of multipoint coupled reactors developed by multi-group transport is verified by using the probabilistic transport code MCNP5 and the continuous-energy Monte Carlo reactor physics burnup calculation Serpent code. The verification was performed by calculating the multiplication factors (or criticality factors) and coupling coefficients for a two-region test reactor known as the Deuterium Critical Assembly, DCA. The multiplication factors k eff calculated numerically and independently from simulations of the DCA by MCNP5 and Serpent codes are compared with the multiplication factors k eff calculated based on the coupled reactor theory. Excellent agreement was obtained between the multiplication factors k eff calculated with the Serpent code, with MCNP5, and from the coupled reactor theory. This analysis demonstrates that the Serpent code is valid for the multipoint coupled reactor calculations. (author)

  7. Numerical verification/validation of the theory of coupled reactors for deuterium critical assembly, using MCNP5 and Serpent codes

    Energy Technology Data Exchange (ETDEWEB)

    Hussein, M.S, E-mail: mohamed.hussein@rmc.ca [Royal Military College of Canada, Dept. of Chemistry and Chemical Engineering, Kingston, Ontario (Canada); Lewis, B.J., E-mail: Brent.Lewis@uoit.ca [Univ. of Ontario Inst. of Technology, Faculty of Energy Systems and Nuclear Science, Oshawa, Ontario (Canada); Bonin, H.W., E-mail: bonin-h@rmc.ca [Royal Military College of Canada, Dept. of Chemistry and Chemical Engineering, Kingston, Ontario (Canada)

    2013-07-01

    The theory of multipoint coupled reactors developed by multi-group transport is verified by using the probabilistic transport code MCNP5 and the continuous-energy Monte Carlo reactor physics burnup calculation Serpent code. The verification was performed by calculating the multiplication factors (or criticality factors) and coupling coefficients for a two-region test reactor known as the Deuterium Critical Assembly, DCA. The multiplication factors k{sub eff} calculated numerically and independently from simulations of the DCA by MCNP5 and Serpent codes are compared with the multiplication factors k{sub eff} calculated based on the coupled reactor theory. Excellent agreement was obtained between the multiplication factors k{sub eff} calculated with the Serpent code, with MCNP5, and from the coupled reactor theory. This analysis demonstrates that the Serpent code is valid for the multipoint coupled reactor calculations. (author)

  8. The property investigation of the numerical code TIGER for the uncertain analysis

    International Nuclear Information System (INIS)

    Ebina, Takanori; Ohi, Takao

    2008-03-01

    In order to obtain the information concerning the safety of the geological disposal under various geological environments, the sensitivity analysis that considers the uncertainty of parameters resulting from the insufficiency of knowledge and information plays an important role. The numerical code TIGER allows the physical and chemical properties within the system to vary with time in the radionuclide migration analysis from vitrified glass to rock and these function is useful for understanding the effect of the property change of each barrier in such sensitivity analysis. Therefore, at this study, some typical processing methods with the engineered barrier system and the host rock were developed at fast, and through the comparison with the calculation time, the step of preprocessing and postprocessing, the most suitable method was considered. After this consideration, the interrelation between the calculation accuracy and the calculation time at the most suitable method was examined for the purpose of using this method to the uncertain analysis. In addition, the STRIDER that was the program to make the input file for the uncertain analysis with setting random parameter and do the preprocessing and the postprocessing, was improved for the uncertain analysis. Through this consideration, the information of the best processing method, the calculation accuracy, and the analysis tool was arranged for an uncertain analysis using TIGER. (author)

  9. Numerical modelling of pressure suppression pools with CFD and FEM codes

    Energy Technology Data Exchange (ETDEWEB)

    Paettikangas, T.; Niemi, J.; Timperi, A. (VTT Technical Research Centre of Finland (Finland))

    2011-06-15

    Experiments on large-break loss-of-coolant accident for BWR is modeled with computational fluid (CFD) dynamics and finite element calculations. In the CFD calculations, the direct-contact condensation in the pressure suppression pool is studied. The heat transfer in the liquid phase is modeled with the Hughes-Duffey correlation based on the surface renewal model. The heat transfer is proportional to the square root of the turbulence kinetic energy. The condensation models are implemented with user-defined functions in the Euler-Euler two-phase model of the Fluent 12.1 CFD code. The rapid collapse of a large steam bubble and the resulting pressure source is studied analytically and numerically. Pressure source obtained from simplified calculations is used for studying the structural effects and FSI in a realistic BWR containment. The collapse results in volume acceleration, which induces pressure loads on the pool walls. In the case of a spherical bubble, the velocity term of the volume acceleration is responsible of the largest pressure load. As the amount of air in the bubble is decreased, the peak pressure increases. However, when the water compressibility is accounted for, the finite speed of sound becomes a limiting factor. (Author)

  10. Numerical simulation of Ge solar cells using D-AMPS-1D code

    Energy Technology Data Exchange (ETDEWEB)

    Barrera, Marcela, E-mail: barrera@tandar.cnea.gov.ar [Comision Nacional de Energia Atomica, Avenida General Paz 1499, San Martin 1650, Buenos Aires (Argentina); Consejo Nacional de Investigaciones Cientificas y Tecnicas (CONICET) (Argentina); Rubinelli, Francisco [Instituto de Desarrollo Tecnologico para la Industria Quimica (INTEC)-CONICET, Gueemes 3450, Santa Fe 3000 (Argentina); Rey-Stolle, Ignacio [Instituto de Energia Solar, Universidad Politecnica de Madrid, Avenida Complutense 30, Madrid 28040 (Spain); Pla, Juan [Comision Nacional de Energia Atomica, Avenida General Paz 1499, San Martin 1650, Buenos Aires (Argentina); Consejo Nacional de Investigaciones Cientificas y Tecnicas (CONICET) (Argentina)

    2012-08-15

    A solar cell is a solid state device that converts the energy of sunlight directly into electricity by the photovoltaic effect. When light with photon energies greater than the band gap is absorbed by a semiconductor material, free electrons and free holes are generated by optical excitation in the material. The main characteristic of a photovoltaic device is the presence of internal electric field able to separate the free electrons and holes so they can pass out of the material to the external circuit before they recombine. Numerical simulation of photovoltaic devices plays a crucial role in their design, performance prediction, and comprehension of the fundamental phenomena ruling their operation. The electrical transport and the optical behavior of the solar cells discussed in this work were studied with the simulation code D-AMPS-1D. This software is an updated version of the one-dimensional (1D) simulation program Analysis of Microelectronic and Photonic Devices (AMPS) that was initially developed at The Penn State University, USA. Structures such as homojunctions, heterojunctions, multijunctions, etc., resulting from stacking layers of different materials can be studied by appropriately selecting characteristic parameters. In this work, examples of cells simulation made with D-AMPS-1D are shown. Particularly, results of Ge photovoltaic devices are presented. The role of the InGaP buffer on the device was studied. Moreover, a comparison of the simulated electrical parameters with experimental results was performed.

  11. Numerical simulation of Ge solar cells using D-AMPS-1D code

    International Nuclear Information System (INIS)

    Barrera, Marcela; Rubinelli, Francisco; Rey-Stolle, Ignacio; Plá, Juan

    2012-01-01

    A solar cell is a solid state device that converts the energy of sunlight directly into electricity by the photovoltaic effect. When light with photon energies greater than the band gap is absorbed by a semiconductor material, free electrons and free holes are generated by optical excitation in the material. The main characteristic of a photovoltaic device is the presence of internal electric field able to separate the free electrons and holes so they can pass out of the material to the external circuit before they recombine. Numerical simulation of photovoltaic devices plays a crucial role in their design, performance prediction, and comprehension of the fundamental phenomena ruling their operation. The electrical transport and the optical behavior of the solar cells discussed in this work were studied with the simulation code D-AMPS-1D. This software is an updated version of the one-dimensional (1D) simulation program Analysis of Microelectronic and Photonic Devices (AMPS) that was initially developed at The Penn State University, USA. Structures such as homojunctions, heterojunctions, multijunctions, etc., resulting from stacking layers of different materials can be studied by appropriately selecting characteristic parameters. In this work, examples of cells simulation made with D-AMPS-1D are shown. Particularly, results of Ge photovoltaic devices are presented. The role of the InGaP buffer on the device was studied. Moreover, a comparison of the simulated electrical parameters with experimental results was performed.

  12. Numerical simulation of the floods in Villahermosa Mexico using the IBER code

    Directory of Open Access Journals (Sweden)

    J.C. González-Aguirre

    2016-10-01

    Full Text Available Floods are a problem that may occur in many parts of the world, but in certain places it happens more frequently, for example in Villahermosa, Mexico, which can be confirmed with the floods of 2000, 2007, 2009 and 2010. In this work the IBER code is used (freely available at http://www.iberaula.es to recreate the scenarios occurred in October 2007, and the numerical results are compared with data provided/collected by CONAGUA in the Hydrometeorological station Gaviotas. The scenarios of the 1st October, 30th October and 31st October were simulated. A steady state was obtained in the simulation of the 1st October, this state was used as initial condition for the simulation of the 30th October, in which are reproduced the conditions of the 31st October. In addition, a sensibility analysis was carried out for the wetting drying parameter and the Courant number.

  13. Numerical study of the ITER divertor plasma with the B2-EIRENE code package

    Energy Technology Data Exchange (ETDEWEB)

    Kotov, V.; Reiter, D. [Forschungszentrum Juelich (DE). Inst. fuer Energieforschung (IEF), Plasmaphysik (IEF-4); Kukushkin, A.S. [ITER International Team, Cadarache (France)

    2007-11-15

    The problem of plasma-wall interaction and impurity control is one of the remaining critical issues for development of an industrial energy source based on nuclear fusion of light isotopes. In this field sophisticated integrated numerical tools are widely used both for the analysis of current experiments and for predictions guiding future device design. The present work is dedicated to the numerical modelling of the edge plasma region in divertor configurations of large-scale tokamak fusion devices. A well established software tool for this kind of modelling is the B2-EIRENE code. It was originally developed for a relatively hot (>> 10 eV) ''high recycling divertor''. It did not take into account a number of physical effects which can be potentially important for ''detached conditions'' (cold, - several eV, - high density, - {approx} 10{sup 21} m{sup -3}, - plasma) typical for large tokamak devices. This is especially critical for the modelling of the divertor plasma of ITER: an international project of an experimental tokamak fusion reactor to be built in Cadarache, France by 2016. This present work is devoted to a major upgrade of the B2-EIRENE package, which is routinely used for ITER modelling, essentially with a significantly revised version of EIRENE: the Monte-Carlo neutral transport code. The main part of the thesis address three major groups of the new physical effects which have been added to the model in frame of this work: the neutral-neutral collisions, the up-to date hydrogen molecular reaction kinetics and the line radiation transport. The impact of the each stage of the upgrade on the self-consistent (between plasma, the neutral gas and the radiation field) solution for the reference ITER case is analysed. The strongest effect is found to be due to the revised molecular collision kinetics, in particular due to hitherto neglected elastic collisions of hydrogen molecules with ions. The newly added non

  14. Numerical study of the ITER divertor plasma with the B2-EIRENE code package

    International Nuclear Information System (INIS)

    Kotov, V.; Reiter, D.; Kukushkin, A.S.

    2007-11-01

    The problem of plasma-wall interaction and impurity control is one of the remaining critical issues for development of an industrial energy source based on nuclear fusion of light isotopes. In this field sophisticated integrated numerical tools are widely used both for the analysis of current experiments and for predictions guiding future device design. The present work is dedicated to the numerical modelling of the edge plasma region in divertor configurations of large-scale tokamak fusion devices. A well established software tool for this kind of modelling is the B2-EIRENE code. It was originally developed for a relatively hot (>> 10 eV) ''high recycling divertor''. It did not take into account a number of physical effects which can be potentially important for ''detached conditions'' (cold, - several eV, - high density, - ∼ 10 21 m -3 , - plasma) typical for large tokamak devices. This is especially critical for the modelling of the divertor plasma of ITER: an international project of an experimental tokamak fusion reactor to be built in Cadarache, France by 2016. This present work is devoted to a major upgrade of the B2-EIRENE package, which is routinely used for ITER modelling, essentially with a significantly revised version of EIRENE: the Monte-Carlo neutral transport code. The main part of the thesis address three major groups of the new physical effects which have been added to the model in frame of this work: the neutral-neutral collisions, the up-to date hydrogen molecular reaction kinetics and the line radiation transport. The impact of the each stage of the upgrade on the self-consistent (between plasma, the neutral gas and the radiation field) solution for the reference ITER case is analysed. The strongest effect is found to be due to the revised molecular collision kinetics, in particular due to hitherto neglected elastic collisions of hydrogen molecules with ions. The newly added non-linear effects (neutral-neutral collisions, radiation opacity

  15. Numerical investigations on pressurized AL-composite vessel response to hypervelocity impacts: Comparison between experimental works and a numerical code

    Directory of Open Access Journals (Sweden)

    Mespoulet Jérôme

    2015-01-01

    Full Text Available Response of pressurized composite-Al vessels to hypervelocity impact of aluminum spheres have been numerically investigated to evaluate the influence of initial pressure on the vulnerability of these vessels. Investigated tanks are carbon-fiber overwrapped prestressed Al vessels. Explored internal air pressure ranges from 1 bar to 300 bar and impact velocity are around 4400 m/s. Data obtained from experiments (Xray radiographies, particle velocity measurement and post-mortem vessels have been compared to numerical results given from LS-DYNA ALE-Lagrange-SPH full coupling models. Simulations exhibit an under estimation in term of debris cloud evolution and shock wave propagation in pressurized air but main modes of damage/rupture on the vessels given by simulations are coherent with post-mortem recovered vessels from experiments. First results of this numerical work are promising and further simulation investigations with additional experimental data will be done to increase the reliability of the simulation model. The final aim of this crossed work is to numerically explore a wide range of impact conditions (impact angle, projectile weight, impact velocity, initial pressure that cannot be explore experimentally. Those whole results will define a rule of thumbs for the definition of a vulnerability analytical model for a given pressurized vessel.

  16. Preliminary Study of 1D Thermal-Hydraulic System Analysis Code Using the Higher-Order Numerical Scheme

    Energy Technology Data Exchange (ETDEWEB)

    Lee, Won Woong; Lee, Jeong Ik [KAIST, Daejeon (Korea, Republic of)

    2016-05-15

    The existing nuclear system analysis codes such as RELAP5, TRAC, MARS and SPACE use the first-order numerical scheme in both space and time discretization. However, the first-order scheme is highly diffusive and less accurate due to the first order of truncation error. So, the numerical diffusion problem which makes the gradients to be smooth in the regions where the gradients should be steep can occur during the analysis, which often predicts less conservatively than the reality. Therefore, the first-order scheme is not always useful in many applications such as boron solute transport. RELAP7 which is an advanced nuclear reactor system safety analysis code using the second-order numerical scheme in temporal and spatial discretization is being developed by INL (Idaho National Laboratory) since 2011. Therefore, for better predictive performance of the safety of nuclear reactor systems, more accurate nuclear reactor system analysis code is needed for Korea too to follow the global trend of nuclear safety analysis. Thus, this study will evaluate the feasibility of applying the higher-order numerical scheme to the next generation nuclear system analysis code to provide the basis for the better nuclear system analysis code development. The accuracy is enhanced in the spatial second-order scheme and the numerical diffusion problem is alleviated while indicates significantly lower maximum Courant limit and the numerical dispersion issue which produces spurious oscillation and non-physical results in the higher-order scheme. If the spatial scheme is the first order scheme then the temporal second-order scheme provides almost the same result with the temporal firstorder scheme. However, when the temporal second order scheme and the spatial second-order scheme are applied together, the numerical dispersion can occur more severely. For the more in-depth study, the verification and validation of the NTS code built in MATLAB will be conducted further and expanded to handle two

  17. Bad-good constraints on a polarity correspondence account for the spatial-numerical association of response codes (SNARC) and markedness association of response codes (MARC) effects.

    Science.gov (United States)

    Leth-Steensen, Craig; Citta, Richie

    2016-01-01

    Performance in numerical classification tasks involving either parity or magnitude judgements is quicker when small numbers are mapped onto a left-sided response and large numbers onto a right-sided response than for the opposite mapping (i.e., the spatial-numerical association of response codes or SNARC effect). Recent research by Gevers et al. [Gevers, W., Santens, S., Dhooge, E., Chen, Q., Van den Bossche, L., Fias, W., & Verguts, T. (2010). Verbal-spatial and visuospatial coding of number-space interactions. Journal of Experimental Psychology: General, 139, 180-190] suggests that this effect also arises for vocal "left" and "right" responding, indicating that verbal-spatial coding has a role to play in determining it. Another presumably verbal-based, spatial-numerical mapping phenomenon is the linguistic markedness association of response codes (MARC) effect whereby responding in parity tasks is quicker when odd numbers are mapped onto left-sided responses and even numbers onto right-sided responses. A recent account of both the SNARC and MARC effects is based on the polarity correspondence principle [Proctor, R. W., & Cho, Y. S. (2006). Polarity correspondence: A general principle for performance of speeded binary classification tasks. Psychological Bulletin, 132, 416-442]. This account assumes that stimulus and response alternatives are coded along any number of dimensions in terms of - and + polarities with quicker responding when the polarity codes for the stimulus and the response correspond. In the present study, even-odd parity judgements were made using either "left" and "right" or "bad" and "good" vocal responses. Results indicated that a SNARC effect was indeed present for the former type of vocal responding, providing further evidence for the sufficiency of the verbal-spatial coding account for this effect. However, the decided lack of an analogous SNARC-like effect in the results for the latter type of vocal responding provides an important

  18. Dosimetric reconstruction of radiological accident by numerical simulations by means associating an anthropomorphic model and a Monte Carlo computation code

    International Nuclear Information System (INIS)

    Courageot, Estelle

    2010-01-01

    After a description of the context of radiological accidents (definition, history, context, exposure types, associated clinic symptoms of irradiation and contamination, medical treatment, return on experience) and a presentation of dose assessment in the case of external exposure (clinic, biological and physical dosimetry), this research thesis describes the principles of numerical reconstruction of a radiological accident, presents some computation codes (Monte Carlo code, MCNPX code) and the SESAME tool, and reports an application to an actual case (an accident which occurred in Equator in April 2009). The next part reports the developments performed to modify the posture of voxelized phantoms and the experimental and numerical validations. The last part reports a feasibility study for the reconstruction of radiological accidents occurring in external radiotherapy. This work is based on a Monte Carlo simulation of a linear accelerator, with the aim of identifying the most relevant parameters to be implemented in SESAME in the case of external radiotherapy

  19. Modeling an HF NVIS Towel-Bar Antenna on a Coast Guard Patrol Boat. A Comparison of WIPL-D and the Numerical Electromagnetics Code (NEC)

    National Research Council Canada - National Science Library

    Mora, Darla; Weiser, Christopher; McKaughan, Michael

    2005-01-01

    A Coast Guard patrol boat high-frequency (HF) near-vertical incident skywave (NVIS) antenna is selected as a test case to compare the electromagnetic modeling programs Numerical Electromagnetics Code, NEC and WIPL-D code...

  20. ANALYSIS OF EXISTING AND PROSPECTIVE TECHNICAL CONTROL SYSTEMS OF NUMERIC CODES AUTOMATIC BLOCKING

    Directory of Open Access Journals (Sweden)

    A. M. Beznarytnyy

    2013-09-01

    Full Text Available Purpose. To identify the characteristic features of the engineering control measures system of automatic block of numeric code, identifying their advantages and disadvantages, to analyze the possibility of their use in the problems of diagnosing status of the devices automatic block and setting targets for the development of new diagnostic systems. Methodology. In order to achieve targets the objective theoretical and analytical method and the method of functional analysis have been used. Findings. The analysis of existing and future facilities of the remote control and diagnostics automatic block devices had shown that the existing systems of diagnosis were not sufficiently informative, designed primarily to control the discrete parameters, which in turn did not allow them to construct a decision support subsystem. In developing of new systems of technical diagnostics it was proposed to use the principle of centralized distributed processing of diagnostic data, to include a subsystem support decision-making in to the diagnostics system, it will reduce the amount of work to maintain the devices blocking and reduce recovery time after the occurrence injury. Originality. As a result, the currently existing engineering controls facilities of automatic block can not provide a full assessment of the state distillation alarms and locks. Criteria for the development of new systems of technical diagnostics with increasing amounts of diagnostic information and its automatic analysis were proposed. Practical value. These results of the analysis can be used in practice in order to select the technical control of automatic block devices, as well as the further development of diagnostic systems automatic block that allows for a gradual transition from a planned preventive maintenance service model to the actual state of the monitored devices.

  1. Numerical analysis of reflood simulation based on a mechanistic, best-estimate, approach by KREWET code

    International Nuclear Information System (INIS)

    Chun, Moon-Hyun; Jeong, Eun-Soo

    1983-01-01

    A new computer code entitled KREWET has been developed in an effort to improve the accuracy and applicability of the existing reflood heat transfer simulation computer code. Sample calculations for temperature histories and heat transfer coefficient are made using KREWET code and the results are compared with the predictions of REFLUX, QUEN1D, and the PWR-FLECHT data for various conditions. These show favourable agreement in terms of clad temperature versus time. For high flooding rates (5-15cm/sec) and high pressure (∼413 Kpa), reflood predictions are reasonably well predicted by KREWET code as well as with other codes. For low flooding rates (less than ∼4cm/sec) and low pressure (∼138Kpa), predictions show considerable error in evaluating the rewet position versus time. This observation is common to all the codes examined in the present work

  2. Numerical analysis for reflood simulation based on a mechanistic, best-estimate, approach by KREWET code

    International Nuclear Information System (INIS)

    Chun, M.-H.; Jeong, E.-S.

    1983-01-01

    A new computer code entitled KREWET has been developed in an effort to improve the accuracy and applicability of the existing reflood heat transfer simulation computer code. Sample calculations for temperature histories and heat transfer coefficient are made using KREWET code and the results are compared with the predictions of REFLUX, QUENID, and the PWR-FLECHT data for various conditions. These show favorable agreement in terms of clad temperature versus time. For high flooding rates (5-15cm/sec) and high pressure (approx. =413 Kpa), reflood predictions are reasonably well predicted by KREWET code as well as with other codes. For low flooding rates (less than approx. =4cm/sec) and low pressure (approx. =138 Kpa), predictions show considerable error in evaluating the rewet position versus time. This observation is common to all the codes examined in the present work

  3. Numerical experiments in finite element analysis of thermoelastoplastic behaviour of materials. Further developments of the PLASTEF code

    International Nuclear Information System (INIS)

    Basombrio, F.G.; Sarmiento, G.S.

    1980-01-01

    In a previous paper the finite element code PLASTEF for the numerical simulation of thermoelastoplastic behaviour of materials was presented in its general outline. This code employs an initial stress incremental procedure for given histories of loads and temperature. It has been formulated for medium sized computers. The present work is an extension of the previous paper to consider additional aspects of the variable temperature case. Non-trivial tests of this type of situation are described. Finally, details are given of some concrete applications to the prediction of thermoelastoplastic collapse of nuclear fuel element cladding. (author)

  4. Numerical Analysis of Diaphragm Wall Model Executed in Poznań Clay Formation Applying Selected Fem Codes

    Directory of Open Access Journals (Sweden)

    Superczyńska M.

    2016-09-01

    Full Text Available The paper presents results of numerical calculations of a diaphragm wall model executed in Poznań clay formation. Two selected FEM codes were applied, Plaxis and Abaqus. Geological description of Poznań clay formation in Poland as well as geotechnical conditions on construction site in Warsaw city area were presented. The constitutive models of clay implemented both in Plaxis and Abaqus were discussed. The parameters of the Poznań clay constitutive models were assumed based on authors’ experimental tests. The results of numerical analysis were compared taking into account the measured values of horizontal displacements.

  5. Finite element circuit theory of the numerical code EDDYMULT for solving eddy current problems in a multi-torus system

    International Nuclear Information System (INIS)

    Nakamura, Yukiharu; Ozeki, Takahisa

    1986-07-01

    The finite element circuit theory is extended to the general eddy current problem in a multi-torus system, which consists of various torus conductors and axisymmetric coil systems. The numerical procedures are devised to avoid practical restrictions of computer storage and computing time, that is, the reduction technique of eddy current eigen modes to save storage and the introduction of shape function into the double area integral of mode coupling to save time. The numerical code EDDYMULT based on the theory is developed to use in designing tokamak device from the viewpoints of the evaluation of electromagnetic loading on the device components and the control analysis of tokamak equilibrium. (author)

  6. Numerical code for fitting radial emission profile of a shell supernova remnant: Application

    Directory of Open Access Journals (Sweden)

    Opsenica Slobodan

    2011-01-01

    Full Text Available We present IDL (Interactive Data Language codes for fitting a theoretical emission profile of a shell supernova remnant (SNR to the mean profile of an SNR obtained from radio observations. Two considered theoretical models are: 1 a shell with constant emissivity and 2 a synchrotron shell with radially aligned magnetic field. The codes were applied to several observed supernova remnants. Good results are obtained in five considered cases, which justify the use of our code for remnants that are bright (so that observational errors are not large and spherically symmetric enough.

  7. RAYIC - a numerical code for the study of ion cyclotron heating of large Tokamak plasmas

    International Nuclear Information System (INIS)

    Brambilla, M.

    1984-02-01

    The code RAYIC models coupling, propagation and absorption of e.m. waves in large axisymmetric plasmas in the ion cyclotron frequency domain. It can be used both to investigate the waves behaviour, and as a source of the power deposition profiles for use in transport codes. The present user manual, after a brief summary of the physical model, presents the structure of RAYIC, the complete list of input-output variables (calling sequence), and some examples of the output which can be obtained from the code. (orig.)

  8. Numerical analysis on ingress-of-coolant events in fusion reactors with TRAC-PF1 code

    International Nuclear Information System (INIS)

    Ose, Yasuo; Takase, Kazuyuki; Akimoto, Hajime

    2000-01-01

    As for accident events related with thermal-hydraulics, in a fusion experimental reactor an ingress-of-coolant event (ICE) and a loss-of-vacuum-accident event (LOVA) should be considered. An integrated ICE/LOVA test apparatus is under planning in order to estimate quantitatively heat transfer and fluid flow characteristics under ICE and LOVA events. This study was carried out to predict numerically the thermal-hydraulic characteristics in fusion reactors at the ICE events before construction of the integrated ICE/LOVA test apparatus. The TRAC-PF1 code, which was originally developed for the thermal-hydraulic safety analysis in light water reactors, was used. The numerical analyses were performed for two kinds of system configuration with/without a pressure-suppression tank:the former for is investigation of the pressure rise characteristics and two-phase flow behavior; the latter for estimation of an effect of the pressure reduction due to the pressure-suppression tank. From the present analytical results, effects of the ingress water flow rate and vessel temperatures on the pressure rise ware clarified quantitatively. Furthermore, the pressure-rise suppression effect due to the vapor condensation in the pressure-suppression tank was predicted numerically. In addition, the useful information regarding to the design of the integrated ICE/LOVA test apparatus and the knowledge with respect to the effective usage of the TRAC-PF1 code were obtained through the present numerical study. (author)

  9. Contributions to multiple element speciation in vegetable plants: Studies on the type of bonding of numerous elements, particularly zinc and cadmium

    International Nuclear Information System (INIS)

    Guenther, K.

    1997-03-01

    In the first part of the study, the total contents and the solubility characteristics of Zn, Cd, Fe, Mn, Cu, Ca, Sr, K and Rb in 26 different vegetable plants, the majority of them commercially available, are reported, obtained by post-decomposition analyses. The data are given for avocados, bananas, cauliflower, chicory, Chinese cabbage, dill, ice lettuce (two specimens), endive, field salad, cucumbers, kohlrabi, lettuce, chard beet, carrots, peppers, leek, radish, red cabbage, loose leaved lettuce, celery (two specimens), spinach, topinambur, white cabbage, and parsley. Cell decomposition was done by treatment of the plant material with an electric dispersing apparatus (Ultra-Turrax) in buffer solution (liquid shearing). The homogenates were separated into supernatants (cytosoles)and pellets by means of centrifugation. Cell decomposition of the plants by crushing with quartz sand after lyophilization (solid shearing) required much more technical effort and for some elements created problems with the blind values. At least 50% on the average of the elements Zn, Cd, Rb, and K could be transferred to the solutions by the dispersing treatment with Ultra-Turrax. In many cases, the cytosole-borne detectable contents of these 5 elements were above 70%. The solubility of Zn and Cd was more strongly dependent on the plant species than that of Cu, Rb, and K. All five elements thus can be analysed by conventional methods for further enhanced speciation. Mn, Ca, and especially Fe and Sr for the most part were found to be bonded to solid cell constituents. However, the solubility characteristics of Ca and Mn and Sr in particular was very homogeneous. In some plants, the contents of Mn and Sr in the cytosoles was approx. 90%, so that comprehensive speciation of these elements is possible. (orig./AJ) [de

  10. On the adequacy of numerical codes for the simulation of vapour cloud explosions

    International Nuclear Information System (INIS)

    Wingerden, G.J.M.v.; Berg, A.C.v.d.

    1984-01-01

    Three spherically symmetric blast simulation codes have been evaluated: a low-flame-speed model (Piston model) and two gasdynamic blast simulation codes (BLAST and CLOUD). Self-similar flow fields in front of constant velocity flames and large- and small-scale spherically symmetric explosions experiments were simulated. The Piston model can be used for the simulation of spherically symmetric explosions at flame speeds -1 whereas BLAST and CLOUD are adequate for flame speeds exceeding 100 ms -1 . An adapted Piston code has been investigated with respect to the capability of simulating blast due to explosions of pancake-shaped clouds. Comparison to an acoustic approach showed that the Piston model can be regarded as an acoustic model with the possibility of handling every imaginable flame path. The research was part of the indirect action research programme on LWR Safety of the Commission of the European Communities. (project 12B, contract 008 SRN)

  11. On the numerical dispersion of electromagnetic particle-in-cell code: Finite grid instability

    International Nuclear Information System (INIS)

    Meyers, M.D.; Huang, C.-K.; Zeng, Y.; Yi, S.A.; Albright, B.J.

    2015-01-01

    The Particle-In-Cell (PIC) method is widely used in relativistic particle beam and laser plasma modeling. However, the PIC method exhibits numerical instabilities that can render unphysical simulation results or even destroy the simulation. For electromagnetic relativistic beam and plasma modeling, the most relevant numerical instabilities are the finite grid instability and the numerical Cherenkov instability. We review the numerical dispersion relation of the Electromagnetic PIC model. We rigorously derive the faithful 3-D numerical dispersion relation of the PIC model, for a simple, direct current deposition scheme, which does not conserve electric charge exactly. We then specialize to the Yee FDTD scheme. In particular, we clarify the presence of alias modes in an eigenmode analysis of the PIC model, which combines both discrete and continuous variables. The manner in which the PIC model updates and samples the fields and distribution function, together with the temporal and spatial phase factors from solving Maxwell's equations on the Yee grid with the leapfrog scheme, is explicitly accounted for. Numerical solutions to the electrostatic-like modes in the 1-D dispersion relation for a cold drifting plasma are obtained for parameters of interest. In the succeeding analysis, we investigate how the finite grid instability arises from the interaction of the numerical modes admitted in the system and their aliases. The most significant interaction is due critically to the correct representation of the operators in the dispersion relation. We obtain a simple analytic expression for the peak growth rate due to this interaction, which is then verified by simulation. We demonstrate that our analysis is readily extendable to charge conserving models

  12. On the numerical dispersion of electromagnetic particle-in-cell code: Finite grid instability

    Science.gov (United States)

    Meyers, M. D.; Huang, C.-K.; Zeng, Y.; Yi, S. A.; Albright, B. J.

    2015-09-01

    The Particle-In-Cell (PIC) method is widely used in relativistic particle beam and laser plasma modeling. However, the PIC method exhibits numerical instabilities that can render unphysical simulation results or even destroy the simulation. For electromagnetic relativistic beam and plasma modeling, the most relevant numerical instabilities are the finite grid instability and the numerical Cherenkov instability. We review the numerical dispersion relation of the Electromagnetic PIC model. We rigorously derive the faithful 3-D numerical dispersion relation of the PIC model, for a simple, direct current deposition scheme, which does not conserve electric charge exactly. We then specialize to the Yee FDTD scheme. In particular, we clarify the presence of alias modes in an eigenmode analysis of the PIC model, which combines both discrete and continuous variables. The manner in which the PIC model updates and samples the fields and distribution function, together with the temporal and spatial phase factors from solving Maxwell's equations on the Yee grid with the leapfrog scheme, is explicitly accounted for. Numerical solutions to the electrostatic-like modes in the 1-D dispersion relation for a cold drifting plasma are obtained for parameters of interest. In the succeeding analysis, we investigate how the finite grid instability arises from the interaction of the numerical modes admitted in the system and their aliases. The most significant interaction is due critically to the correct representation of the operators in the dispersion relation. We obtain a simple analytic expression for the peak growth rate due to this interaction, which is then verified by simulation. We demonstrate that our analysis is readily extendable to charge conserving models.

  13. Development and implementation of a set of numerical quadratures SQN and EQN type in the transport code AZTRAN

    International Nuclear Information System (INIS)

    Chepe P, M.; Xolocostli M, J. V.; Gomez T, A. M.; Del Valle G, E.

    2015-09-01

    The deterministic transport codes for analysis of nuclear reactors have been used for several years already, these codes have evolved in terms of the methodology used and the degree of accuracy, because at the present time has more computer power. In this paper, the transport code used considers the classical technique of multi-group for discretization energy, for space discretization uses the nodal methods, while for the angular discretization the discrete ordinates method is used; so that presents the development and implementation of a set of numerical quadratures of SQ N type symmetrical with the same weight for each angular direction and these are compared with the quadratures of EQ N type. The two sets of numerical quadratures were implemented in the program AZTRAN to a problem with isotropic medium in XYZ geometry, in steady state using the nodal method RTN-0 (Raviart-Thomas-Nedelec). The analyzed results correspond to the effective multiplication factor k eff and neutron angular flux with approximations from S 4 to S 16 . (Author)

  14. VINE-A NUMERICAL CODE FOR SIMULATING ASTROPHYSICAL SYSTEMS USING PARTICLES. II. IMPLEMENTATION AND PERFORMANCE CHARACTERISTICS

    International Nuclear Information System (INIS)

    Nelson, Andrew F.; Wetzstein, M.; Naab, T.

    2009-01-01

    We continue our presentation of VINE. In this paper, we begin with a description of relevant architectural properties of the serial and shared memory parallel computers on which VINE is intended to run, and describe their influences on the design of the code itself. We continue with a detailed description of a number of optimizations made to the layout of the particle data in memory and to our implementation of a binary tree used to access that data for use in gravitational force calculations and searches for smoothed particle hydrodynamics (SPH) neighbor particles. We describe the modifications to the code necessary to obtain forces efficiently from special purpose 'GRAPE' hardware, the interfaces required to allow transparent substitution of those forces in the code instead of those obtained from the tree, and the modifications necessary to use both tree and GRAPE together as a fused GRAPE/tree combination. We conclude with an extensive series of performance tests, which demonstrate that the code can be run efficiently and without modification in serial on small workstations or in parallel using the OpenMP compiler directives on large-scale, shared memory parallel machines. We analyze the effects of the code optimizations and estimate that they improve its overall performance by more than an order of magnitude over that obtained by many other tree codes. Scaled parallel performance of the gravity and SPH calculations, together the most costly components of most simulations, is nearly linear up to at least 120 processors on moderate sized test problems using the Origin 3000 architecture, and to the maximum machine sizes available to us on several other architectures. At similar accuracy, performance of VINE, used in GRAPE-tree mode, is approximately a factor 2 slower than that of VINE, used in host-only mode. Further optimizations of the GRAPE/host communications could improve the speed by as much as a factor of 3, but have not yet been implemented in VINE

  15. Applicability of numerical simulation code TPFIT to two-phase flow in Venturi scrubber

    International Nuclear Information System (INIS)

    Horiguchi, Naoki; Kanagawa, Tetsuya; Kaneko, Akiko; Abe, Yutaka; Yoshida, Hiroyuki

    2015-01-01

    As one of the filtered venting devices for light water reactor, Venturi scrubber can operate with effective decontamination efficiency because dispersed flow is formed in the Venturi scrubber by pressure difference between inside and outside of holes for liquid suction. Droplet diameter and its distribution in cross-section area are important for the decontamination. However, they are changed by hydraulic behavior of suctioned liquid until atomized, and kinds of atomization phenomena. In this report, to understand the hydraulic behavior of the liquid in detail for the filtered venting, we performed visualized observation experimentally and numerical simulation by TPFIT. Then the numerical simulation result was validated by the experimental data. (author)

  16. The use of CFD code for numerical simulation study on the air/water countercurrent flow limitation in nuclear reactors

    Energy Technology Data Exchange (ETDEWEB)

    Morghi, Youssef; Mesquita, Amir Zacarias; Santos, Andre Augusto Campagnole dos; Vasconcelos, Victor, E-mail: ymo@cdtn.br, E-mail: amir@cdtn.br, E-mail: aacs@cdtn.br, E-mail: vitors@cdtn.br [Centro de Desenvolvimento da Tecnologia Nuclear (CDTN/CNEN-MG), Belo Horizonte, MG (Brazil)

    2015-07-01

    For the experimental study on the air/water countercurrent flow limitation in Nuclear Reactors, were built at CDTN an acrylic test sections with the same geometric shape of 'hot leg' of a Pressurized Water Reactor (PWR). The hydraulic circuit is designed to be used with air and water at pressures near to atmospheric and ambient temperature. Due to the complexity of the CCFL experimental, the numerical simulation has been used. The aim of the numerical simulations is the validation of experimental data. It is a global trend, the use of computational fluid dynamics (CFD) modeling and prediction of physical phenomena related to heat transfer in nuclear reactors. The most used CFD codes are: FLUENT®, STAR- CD®, Open Foam® and CFX®. In CFD, closure models are required that must be validated, especially if they are to be applied to nuclear reactor safety. The Thermal- Hydraulics Laboratory of CDTN offers computing infrastructure and license to use commercial code CFX®. This article describes a review about CCFL and the use of CFD for numerical simulation of this phenomenal for Nuclear Rector. (author)

  17. The use of CFD code for numerical simulation study on the air/water countercurrent flow limitation in nuclear reactors

    International Nuclear Information System (INIS)

    Morghi, Youssef; Mesquita, Amir Zacarias; Santos, Andre Augusto Campagnole dos; Vasconcelos, Victor

    2015-01-01

    For the experimental study on the air/water countercurrent flow limitation in Nuclear Reactors, were built at CDTN an acrylic test sections with the same geometric shape of 'hot leg' of a Pressurized Water Reactor (PWR). The hydraulic circuit is designed to be used with air and water at pressures near to atmospheric and ambient temperature. Due to the complexity of the CCFL experimental, the numerical simulation has been used. The aim of the numerical simulations is the validation of experimental data. It is a global trend, the use of computational fluid dynamics (CFD) modeling and prediction of physical phenomena related to heat transfer in nuclear reactors. The most used CFD codes are: FLUENT®, STAR- CD®, Open Foam® and CFX®. In CFD, closure models are required that must be validated, especially if they are to be applied to nuclear reactor safety. The Thermal- Hydraulics Laboratory of CDTN offers computing infrastructure and license to use commercial code CFX®. This article describes a review about CCFL and the use of CFD for numerical simulation of this phenomenal for Nuclear Rector. (author)

  18. From the direct numerical simulation to system codes-perspective for the multi-scale analysis of LWR thermal hydraulics

    International Nuclear Information System (INIS)

    Bestion, D.

    2010-01-01

    A multi-scale analysis of water-cooled reactor thermal hydraulics can be used to take advantage of increased computer power and improved simulation tools, including Direct Numerical Simulation (DNS), Computational Fluid Dynamics (CFD) (in both open and porous mediums), and system thermalhydraulic codes. This paper presents a general strategy for this procedure for various thermalhydraulic scales. A short state of the art is given for each scale, and the role of the scale in the overall multi-scale analysis process is defined. System thermalhydraulic codes will remain a privileged tool for many investigations related to safety. CFD in porous medium is already being frequently used for core thermal hydraulics, either in 3D modules of system codes or in component codes. CFD in open medium allows zooming on some reactor components in specific situations, and may be coupled to the system and component scales. Various modeling approaches exist in the domain from DNS to CFD which may be used to improve the understanding of flow processes, and as a basis for developing more physically based models for macroscopic tools. A few examples are given to illustrate the multi-scale approach. Perspectives for the future are drawn from the present state of the art and directions for future research and development are given

  19. Jet formation and equatorial superrotation in Jupiter's atmosphere: Numerical modelling using a new efficient parallel code

    Science.gov (United States)

    Rivier, Leonard Gilles

    Using an efficient parallel code solving the primitive equations of atmospheric dynamics, the jet structure of a Jupiter like atmosphere is modeled. In the first part of this thesis, a parallel spectral code solving both the shallow water equations and the multi-level primitive equations of atmospheric dynamics is built. The implementation of this code called BOB is done so that it runs effectively on an inexpensive cluster of workstations. A one dimensional decomposition and transposition method insuring load balancing among processes is used. The Legendre transform is cache-blocked. A "compute on the fly" of the Legendre polynomials used in the spectral method produces a lower memory footprint and enables high resolution runs on relatively small memory machines. Performance studies are done using a cluster of workstations located at the National Center for Atmospheric Research (NCAR). BOB performances are compared to the parallel benchmark code PSTSWM and the dynamical core of NCAR's CCM3.6.6. In both cases, the comparison favors BOB. In the second part of this thesis, the primitive equation version of the code described in part I is used to study the formation of organized zonal jets and equatorial superrotation in a planetary atmosphere where the parameters are chosen to best model the upper atmosphere of Jupiter. Two levels are used in the vertical and only large scale forcing is present. The model is forced towards a baroclinically unstable flow, so that eddies are generated by baroclinic instability. We consider several types of forcing, acting on either the temperature or the momentum field. We show that only under very specific parametric conditions, zonally elongated structures form and persist resembling the jet structure observed near the cloud level top (1 bar) on Jupiter. We also study the effect of an equatorial heat source, meant to be a crude representation of the effect of the deep convective planetary interior onto the outer atmospheric layer. We

  20. The development of high performance numerical simulation code for transient groundwater flow and reactive solute transport problems based on local discontinuous Galerkin method

    International Nuclear Information System (INIS)

    Suzuki, Shunichi; Motoshima, Takayuki; Naemura, Yumi; Kubo, Shin; Kanie, Shunji

    2009-01-01

    The authors develop a numerical code based on Local Discontinuous Galerkin Method for transient groundwater flow and reactive solute transport problems in order to make it possible to do three dimensional performance assessment on radioactive waste repositories at the earliest stage possible. Local discontinuous Galerkin Method is one of mixed finite element methods which are more accurate ones than standard finite element methods. In this paper, the developed numerical code is applied to several problems which are provided analytical solutions in order to examine its accuracy and flexibility. The results of the simulations show the new code gives highly accurate numeric solutions. (author)

  1. Numerical solution of conservation equations in the transient model for the system thermal - hydraulics in the Korsar computer code

    International Nuclear Information System (INIS)

    Yudov, Y.V.

    2001-01-01

    The functional part of the KORSAR computer code is based on the computational unit for the reactor system thermal-hydraulics and other thermal power systems with water cooling. The two-phase flow dynamics of the thermal-hydraulic network is modelled by KORSAR in one-dimensional two-fluid (non-equilibrium and nonhomogeneous) approximation with the same pressure of both phases. Each phase is characterized by parameters averaged over the channel sections, and described by the conservation equations for mass, energy and momentum. The KORSAR computer code relies upon a novel approach to mathematical modelling of two-phase dispersed-annular flows. This approach allows a two-fluid model to differentiate the effects of the liquid film and droplets in the gas core on the flow characteristics. A semi-implicit numerical scheme has been chosen for deriving discrete analogs the conservation equations in KORSAR. In the semi-implicit numerical scheme, solution of finite-difference equations is reduced to the problem of determining the pressure field at a new time level. For the one-channel case, the pressure field is found from the solution of a system of linear algebraic equations by using the tri-diagonal matrix method. In the branched network calculation, the matrix of coefficients in the equations describing the pressure field is no longer tri-diagonal but has a sparseness structure. In this case, the system of linear equations for the pressure field can be solved with any of the known classical methods. Such an approach is implemented in the existing best-estimate thermal-hydraulic computer codes (TRAC, RELAP5, etc.) For the KORSAR computer code, we have developed a new non-iterative method for calculating the pressure field in the network of any topology. This method is based on the tri-diagonal matrix method and performs well when solving the thermal-hydraulic network problems. (author)

  2. Quasi-optical converters for high-power gyrotrons: a brief review of physical models, numerical methods and computer codes

    International Nuclear Information System (INIS)

    Sabchevski, S; Zhelyazkov, I; Benova, E; Atanassov, V; Dankov, P; Thumm, M; Arnold, A; Jin, J; Rzesnicki, T

    2006-01-01

    Quasi-optical (QO) mode converters are used to transform electromagnetic waves of complex structure and polarization generated in gyrotron cavities into a linearly polarized, Gaussian-like beam suitable for transmission. The efficiency of this conversion as well as the maintenance of low level of diffraction losses are crucial for the implementation of powerful gyrotrons as radiation sources for electron-cyclotron-resonance heating of fusion plasmas. The use of adequate physical models, efficient numerical schemes and up-to-date computer codes may provide the high accuracy necessary for the design and analysis of these devices. In this review, we briefly sketch the most commonly used QO converters, the mathematical base they have been treated on and the basic features of the numerical schemes used. Further on, we discuss the applicability of several commercially available and free software packages, their advantages and drawbacks, for solving QO related problems

  3. U.F.F.A.: A numerical procedure for fatigue analysis according to ASME code

    International Nuclear Information System (INIS)

    Bellettato, W.; Ticozzi, C.; Zucchini, C.

    1981-01-01

    A new procedure is developed, which employs some already used methodologies and brings some new concepts. The computer code UFFA employs the so obtained procedure. This paper in the first part describes the methodology used for the usage factor calculation, in the second part carries a general description of the code and in the third part shows some example and their respective results. We suppose an elastic behaviour of the materials and we do not consider the effect of the application order of the loads. Moreover, we suppose valid the hypothesis of cumulative damage, that is we apply the Miner's rule. One of the problems in the nuclear components fatigue analysis is that in the load histories there is a high number of operational cycles for which we cannot specify a succession in the time. Therefore, it was introduced the concept of 'level' (or steady working status) by which we can approximate the load conditions in realistic way. As regard the problem of multiaxial cases, it is possible to show that it is not right, an neither conservative, to make a distinguished analysis of the 3 stress differences and then take the maximum of the 3 compuoted usage factors as component usage factor. Indeed, as the stresses act on the structure at the same time, it is necessary a contemporary analysis of the 3 stress difference curves. The computer code can deal as well with the case of sher stresses (varying principal stress directions) through the ASME 'normalization' procedure. The results of the UFFA program, compared with the results of other programs used at present, come up to the expectations. (orig./HP)

  4. Numeral series hidden in the distribution of atomic mass of amino acids to codon domains in the genetic code.

    Science.gov (United States)

    Wohlin, Åsa

    2015-03-21

    The distribution of codons in the nearly universal genetic code is a long discussed issue. At the atomic level, the numeral series 2x(2) (x=5-0) lies behind electron shells and orbitals. Numeral series appear in formulas for spectral lines of hydrogen. The question here was if some similar scheme could be found in the genetic code. A table of 24 codons was constructed (synonyms counted as one) for 20 amino acids, four of which have two different codons. An atomic mass analysis was performed, built on common isotopes. It was found that a numeral series 5 to 0 with exponent 2/3 times 10(2) revealed detailed congruency with codon-grouped amino acid side-chains, simultaneously with the division on atom kinds, further with main 3rd base groups, backbone chains and with codon-grouped amino acids in relation to their origin from glycolysis or the citrate cycle. Hence, it is proposed that this series in a dynamic way may have guided the selection of amino acids into codon domains. Series with simpler exponents also showed noteworthy correlations with the atomic mass distribution on main codon domains; especially the 2x(2)-series times a factor 16 appeared as a conceivable underlying level, both for the atomic mass and charge distribution. Furthermore, it was found that atomic mass transformations between numeral systems, possibly interpretable as dimension degree steps, connected the atomic mass of codon bases with codon-grouped amino acids and with the exponent 2/3-series in several astonishing ways. Thus, it is suggested that they may be part of a deeper reference system. Copyright © 2015 The Author. Published by Elsevier Ltd.. All rights reserved.

  5. Development and Validation of a Momentum Integral Numerical Analysis Code for Liquid Metal Fast Reactor

    International Nuclear Information System (INIS)

    Chen, Xiangyi; Suh, Kune Y.

    2016-01-01

    In this work, this benchmark problem is conducted to assess the precision of the upgraded in-house code MINA. Comparison of the results from different best estimate codes employed by various grid spacer pressure drop correlations is carried out to suggest the best one. By modifying In's method, it presents good agreement with the experiment data which is shown in Figure 7. The reason for the failure of the prediction in previous work is caused by the utilization of Rehme's method which is categorized into four groups according to different fitting strategy. Through comparison of drag coefficients calculated by four groups of Rheme's method, equivalent drag coefficient calculated by In's method and experiment data shown in Figure 8, we can conclude that Rehme's method considerably underestimate the drag coefficients in grid spacers used in HELIOS and In's method give a reasonable prediction. Starting from the core inlet, the accumulated pressure losses are presented in figure 9 along the accumulated length of the forced convection flow path; the good agreement of the prediction from MINA with the experiment result shows MINA has very good capability in integrated momentum analysis makes it robust in the future design scoping method development of LFR.

  6. Development and Validation of a Momentum Integral Numerical Analysis Code for Liquid Metal Fast Reactor

    Energy Technology Data Exchange (ETDEWEB)

    Chen, Xiangyi; Suh, Kune Y. [KAERI, Daejeon (Korea, Republic of)

    2016-05-15

    In this work, this benchmark problem is conducted to assess the precision of the upgraded in-house code MINA. Comparison of the results from different best estimate codes employed by various grid spacer pressure drop correlations is carried out to suggest the best one. By modifying In's method, it presents good agreement with the experiment data which is shown in Figure 7. The reason for the failure of the prediction in previous work is caused by the utilization of Rehme's method which is categorized into four groups according to different fitting strategy. Through comparison of drag coefficients calculated by four groups of Rheme's method, equivalent drag coefficient calculated by In's method and experiment data shown in Figure 8, we can conclude that Rehme's method considerably underestimate the drag coefficients in grid spacers used in HELIOS and In's method give a reasonable prediction. Starting from the core inlet, the accumulated pressure losses are presented in figure 9 along the accumulated length of the forced convection flow path; the good agreement of the prediction from MINA with the experiment result shows MINA has very good capability in integrated momentum analysis makes it robust in the future design scoping method development of LFR.

  7. Numerical

    Directory of Open Access Journals (Sweden)

    M. Boumaza

    2015-07-01

    Full Text Available Transient convection heat transfer is of fundamental interest in many industrial and environmental situations, as well as in electronic devices and security of energy systems. Transient fluid flow problems are among the more difficult to analyze and yet are very often encountered in modern day technology. The main objective of this research project is to carry out a theoretical and numerical analysis of transient convective heat transfer in vertical flows, when the thermal field is due to different kinds of variation, in time and space of some boundary conditions, such as wall temperature or wall heat flux. This is achieved by the development of a mathematical model and its resolution by suitable numerical methods, as well as performing various sensitivity analyses. These objectives are achieved through a theoretical investigation of the effects of wall and fluid axial conduction, physical properties and heat capacity of the pipe wall on the transient downward mixed convection in a circular duct experiencing a sudden change in the applied heat flux on the outside surface of a central zone.

  8. Numerical simulation of L.E.L. in Compton regime. Part II, GONDOLE, a three-dimensional code

    International Nuclear Information System (INIS)

    Deck, D.

    1992-07-01

    In the first part of this report, the BIWI two-dimensional numerical simulation code of L.E.L. in Compton regime has been described; the question was to simulate L.E.L. experiments in 'optical mode', that is to say for wavelengths of the order of one micron. The axisymmetric cylindrical geometry (r,z) of the BIWI code is adapted to these experiments. However, the increasingly frequent use of L.E.L. in the regime of microwaves requires the presence of a waveguide within the inverter, which breaks the cylindrical symmetry and forces us to adopt another geometry. On the other hand, the desire to take into account fields of inverters having a gradient in the direction transverse to the direction of propagation of the beam, and thus allowing various focalizations (quadrupole, parabolic, etc.), leads to work in Cartesian geometry. For these reasons (and for others that will appear later), the GONDOLE code has been written and is described in this note. The Gondole code is three-dimensional (x, y, z) and allows to simulate a large variety of L.E.L experiences. Then, all the inverter fields that the GONDOLE code takes into account are introduced. These fields are responsible for the existence of a current J(vector) perpendicular to the Z axis of propagation, and source of radiation. The dynamics of the electrons is then deduced, which derives directly from these fields, and it is shown to which equations of propagation of the laser wave each different J(vector) is coupling [fr

  9. Numerical Analyses of a single-phase natural convection system for Molten Flibe using MARS-FLIBE code

    Energy Technology Data Exchange (ETDEWEB)

    Kang, Sarah; Bang, In Cheol [Ulsan National Institute of Science and Technology, Ulsan (Korea, Republic of)

    2014-10-15

    These advantages make the MSR attractive and to be one of the six candidates for the Generation IV Reactor. Therefore, the researches related to the MSR are being conducted. To analyze the molten salt-cooled systems in the laboratory, this study generated the properties of molten salt using MARS-LMR. In this research, the implemented salts were Flibe (LiF-BeF{sub 2}) in a molar mixture that is 66% LiF and 34% BeF{sub 2}, respectively. Table 1 indicates the comparison of thermal properties of various coolants in nuclear power plants. Molten salt was added to the MARS-LMR code to support the analysis of Flibe-cooled systems. The molten salt includes LiF-BeF{sub 2} in a molar mixture that is 66% LiF and 34% BeF{sub 2}, respectively. MARS-LMR code for liquid metals uses the soft sphere model based on Monte Carlo calculations for particles interacting with pair potentials. Although MARS was originally intended for a safety analysis of light water reactor, Flibe properties were newly added to this code as so-called MARS-FLIBE which is applicable for Flibe-cooled systems. By using this thermodynamic property table file, the thermal hydraulic systems of Flibe can be simulated for numerical and parametric studies. In this study, the natural convection phenomena in the rectangular natural convection loop and IVR-ERVC in APR 1400 were simulated. Through the simulations in Flibe-cooled systems, the temperature distribution and mass flowrate of Flibe can be calculated and the heat transfer coefficients of Flibe in natural convection loop will be calculated by adding the related heat transfer correlations in the MARS-FLIBE code. MARS-FLIBE code will be used to predict and design of Flibe-cooled systems.

  10. Numerical approach of multi-field two-phase flow models in the OVAP code

    International Nuclear Information System (INIS)

    Anela Kumbaro

    2005-01-01

    Full text of publication follows: A significant progress has been made in modeling the complexity of vapor-liquid two-phase flow. Different three-dimensional models exist in order to simulate the evolution of parameters which characterize a two-phase model. These models can be classified into various groups depending on the inter-field coupling. A hierarchy of increasing physical complexity can be defined. The simplest group corresponds to the homogeneous mixture models where no interactions are taken into account. Another group is constituted by the two-fluid models employing physically important interfacial forces between two-phases, liquid, and water. The last group is multi-field modeling where inter-field couplings can be taken into account at different degrees, such as the MUltiple Size Group modeling [2], the consideration of separate equations for the transport and generation of mass and momentum for each field under the assumption of the same energy for all the fields of the same phase, and a full multi-field two-phase model [1]. The numerical approach of the general three-dimensional two-phase flow is by complexity of the phenomena a very challenging task; the ideal numerical method should be at the same time simple in order to apply to any model, from equilibrium to multi-field model and conservative in order to respect the fundamental conservation physical laws. The approximate Riemann solvers have the good properties of conservation of mass, momentum and energy balance and have been extended successfully to two-fluid models [3]- [5]. But, the up-winding of the flux is based on the Eigen-decomposition of the two-phase flow model and the computation of the Eigen-structure of a multi-field model can be a high cost procedure. Our contribution will present a short review of the above two-phase models, and show numerical results obtained for some of them with an approximate Riemann solver and with lower-complexity alternative numerical methods that do not

  11. The numerical comparison of fire combustion model and water-mist suppression with experiments by FDS code

    International Nuclear Information System (INIS)

    Li Hsuennien; Ferng Yuhming; Shih Chunkuan; Hsu Wensheng

    2007-01-01

    FDS [1] code numerically solves a form of the Navier-Stokes equations appropriate for low-speed, thermally driven flow with an emphasis on smoke and heat transport from fires. FDS uses a mixture fraction combustion model. The mixture fraction is a conserved scalar quantity that is defined as the fraction of fuel gas at a given point in the flow field. The model assumes that combustion is mixing-controlled, and that the reaction of fuel and oxygen is infinitely fast. In FDS, Lagrangian particles are used to simulate smoke movement and sprinkling water-mist discharge. In order to evaluate the combustion model and water-mist suppression function of the code, FDS analyses are conducted to simulate two enclosure fire cases available in the literature. Comparisons with other combustion models are also made. For fires suppression by water-mist in FDS, parametric studies are performed to compare various water-mist injection characteristics for maximum suppression. Numerical results indicate that the flame suppression is closely related to characteristics of the water mist, such as droplet diameter, mist injection velocity, injection density. Our present investigations show that the combustion model and water-mist suppression in FDS can provide simulation results that are comparable with the experiments. (author)

  12. A numerical study of the influence of the void drift model on the predictions of the assert subchannel code

    International Nuclear Information System (INIS)

    Tye, P.; Teyssedou, A.; Troche, N.; Kiteley, J.

    1996-01-01

    One of the factors which is important in order to ensure the continued safe operation of nuclear reactors is the ability to accurately predict the 'Critical Heat Flux' (CHF) throughout the rod bundles in the fuel channel. One method currently used by the Canadian nuclear industry to predict the CHF in the fuel bundles of CANDU reactors is to use the ASSERT subchannel code to predict the local thermal-hydraulic conditions prevailing at each axial location in each subchannel in conjunction with appropriate correlations or the CHF look-up table. The successful application of the above methods depends greatly on the ability of ASSERT to accurately predict the local flow conditions throughout the fuel channel. In this paper, full range qualitative verification tests, using the ASSERT subchannel code are presented which show the influence of the void drift model on the predictions of the local subchannel quality. For typical cases using a 7 rod subset of a full 37 element rod bundle taken from the ASSERT validation database, it will be shown that the void drift term can significantly influence the calculated distribution of the quality in the rod bundle. In order to isolate, as much as possible, the influence of the void drift term this first numerical study is carried out with the rod bundle oriented both vertically and horizontally. Subsequently, additional numerical experiments will be presented which show the influence that the void drift model has on the predicted CHF locations. (author)

  13. COLLAGE 2: a numerical code for radionuclide migration through a fractured geosphere in aqueous and colloidal phases

    International Nuclear Information System (INIS)

    Grindrod, P.; Cooper, N.

    1993-05-01

    In previous work, the COLLAGE code was developed to model the impacts of mobile and immobile colloidal material upon the dispersal and migration of a radionuclide species within a saturated planer fracture surrounded by porous media. The adsorption of radionuclides to colloid surfaces was treated as instantaneous and reversible. In this report we present a new version of the code, COLLAGE 2. Here the adsorption of radionuclides to the colloidal material is treated via first order kinetics. The flow and geometry of the fracture remain as in the previous model. The major effect of colloids upon the radionuclide species is to adsorb them within the fracture space and thus exclude them from the surrounding porous medium. Thus the matrix diffusion process, a strongly retarding effect, is exchanged for a colloid capture/release process by which adsorbed nuclides are also retarded. The effects of having a colloid-radionuclide kinetic interaction include the phenomena of double pulse breakthrough (the pseudo colloid population followed by the solute plume) in cases where the desorption process is slow and the pseudo colloids are highly mobile. Some example calculations are given and some verification examples are discussed. Finally a complete listing of the code is presented as an appendix, including the subroutines allowing for the numerical inversion of the Laplace transformed solution via Talbot's method. 6 figs

  14. COLLAGE 2: a numerical code for radionuclide migration through a fractured geosphere in aqueous and colloidal phases

    Energy Technology Data Exchange (ETDEWEB)

    Grindrod, P.; Cooper, N. [Intera Information Technologies Ltd., Henley-on-Thames (United Kingdom)

    1993-05-01

    In previous work, the COLLAGE code was developed to model the impacts of mobile and immobile colloidal material upon the dispersal and migration of a radionuclide species within a saturated planer fracture surrounded by porous media. The adsorption of radionuclides to colloid surfaces was treated as instantaneous and reversible. In this report we present a new version of the code, COLLAGE 2. Here the adsorption of radionuclides to the colloidal material is treated via first order kinetics. The flow and geometry of the fracture remain as in the previous model. The major effect of colloids upon the radionuclide species is to adsorb them within the fracture space and thus exclude them from the surrounding porous medium. Thus the matrix diffusion process, a strongly retarding effect, is exchanged for a colloid capture/release process by which adsorbed nuclides are also retarded. The effects of having a colloid-radionuclide kinetic interaction include the phenomena of double pulse breakthrough (the pseudo colloid population followed by the solute plume) in cases where the desorption process is slow and the pseudo colloids are highly mobile. Some example calculations are given and some verification examples are discussed. Finally a complete listing of the code is presented as an appendix, including the subroutines allowing for the numerical inversion of the Laplace transformed solution via Talbot`s method. 6 figs.

  15. Ion cyclotron emission calculations using a 2D full wave numerical code

    International Nuclear Information System (INIS)

    Batchelor, D.B.; Jaeger, E.F.; Colestock, P.L.

    1987-01-01

    Measurement of radiation in the HF band due to cyclotron emission by energetic ions produced by fusion reactions or neutral beam injection promises to be a useful diagnostic on large devices which are entering the reactor regime of operation. A number of complications make the modelling and interpretation of such measurements difficult using conventional geometrical optics methods. In particular the long wavelength and lack of high directivity of antennas in this frequency regime make observation of a single path across the plasma into a viewing dump impractical. Pickup antennas effectively see the whole plasma and wall reflection effects are important. We have modified our 2D full wave ICRH code 2 to calculate wave fields due to a distribution of energetic ions in tokamak geometry. The radiation is modeled as due to an ensemble of localized source currents distributed in space. The spatial structure of the coherent wave field is then calculated including cyclotron harmonic damping as compared to the usual procedure of incoherently summing powers of individual radiators. This method has the advantage that phase information from localized radiating currents is globally retained so the directivity of the pickup antennas is correctly represented. Also standing waves and wall reflections are automatically included

  16. L’Application des Codes de Costas et des Codes a Congruences Quadratiques a la Compression d’Impulsion Numerique (The Application of Cost, Codes and Quadratic Congruence Codes to the Compression of Numeric Impulsion)

    Science.gov (United States)

    1991-12-01

    de produire des diagrammes d’ambigult& en forme de punaise avec de faibles lobes...particularit& de produire des diagrammes d’ambiguiLt6 en forme de punaise tout en ayant de faibles lobes secondaires. Ce rapport traite des diff6rentes m6thodes...les codes de Costas, les r~sultats obtenus mantrent que les codes de Golomb of frent de mains bonnes possibi- lit ~s que les codes de Welch pour

  17. Numerical evaluation of the bispectrum in multiple field inflation—the transport approach with code

    Energy Technology Data Exchange (ETDEWEB)

    Dias, Mafalda; Frazer, Jonathan [Theory Group, Deutsches Elektronen-Synchrotron, DESY, D-22603, Hamburg (Germany); Mulryne, David J. [School of Physics and Astronomy, Queen Mary University of London, Mile End Road, London E1 4NS (United Kingdom); Seery, David, E-mail: mafalda.dias@desy.de, E-mail: jonathan.frazer@desy.de, E-mail: d.mulryne@qmul.ac.uk, E-mail: D.Seery@sussex.ac.uk [Astronomy Centre, University of Sussex, Falmer, Brighton BN1 9QH (United Kingdom)

    2016-12-01

    We present a complete framework for numerical calculation of the power spectrum and bispectrum in canonical inflation with an arbitrary number of light or heavy fields. Our method includes all relevant effects at tree-level in the loop expansion, including (i) interference between growing and decaying modes near horizon exit; (ii) correlation and coupling between species near horizon exit and on superhorizon scales; (iii) contributions from mass terms; and (iv) all contributions from coupling to gravity. We track the evolution of each correlation function from the vacuum state through horizon exit and the superhorizon regime, with no need to match quantum and classical parts of the calculation; when integrated, our approach corresponds exactly with the tree-level Schwinger or 'in-in' formulation of quantum field theory. In this paper we give the equations necessary to evolve all two- and three-point correlation functions together with suitable initial conditions. The final formalism is suitable to compute the amplitude, shape, and scale dependence of the bispectrum in models with | f {sub NL}| of order unity or less, which are a target for future galaxy surveys such as Euclid, DESI and LSST. As an illustration we apply our framework to a number of examples, obtaining quantitatively accurate predictions for their bispectra for the first time. Two accompanying reports describe publicly-available software packages that implement the method.

  18. Numerical evaluation of the bispectrum in multiple field inflation—the transport approach with code

    International Nuclear Information System (INIS)

    Dias, Mafalda; Frazer, Jonathan; Mulryne, David J.; Seery, David

    2016-01-01

    We present a complete framework for numerical calculation of the power spectrum and bispectrum in canonical inflation with an arbitrary number of light or heavy fields. Our method includes all relevant effects at tree-level in the loop expansion, including (i) interference between growing and decaying modes near horizon exit; (ii) correlation and coupling between species near horizon exit and on superhorizon scales; (iii) contributions from mass terms; and (iv) all contributions from coupling to gravity. We track the evolution of each correlation function from the vacuum state through horizon exit and the superhorizon regime, with no need to match quantum and classical parts of the calculation; when integrated, our approach corresponds exactly with the tree-level Schwinger or 'in-in' formulation of quantum field theory. In this paper we give the equations necessary to evolve all two- and three-point correlation functions together with suitable initial conditions. The final formalism is suitable to compute the amplitude, shape, and scale dependence of the bispectrum in models with | f NL | of order unity or less, which are a target for future galaxy surveys such as Euclid, DESI and LSST. As an illustration we apply our framework to a number of examples, obtaining quantitatively accurate predictions for their bispectra for the first time. Two accompanying reports describe publicly-available software packages that implement the method.

  19. Numerical evaluation of the bispectrum in multiple field inflation. The transport approach with code

    International Nuclear Information System (INIS)

    Dias, Mafalda; Mulryne, David J.; Seery, David

    2016-09-01

    We present a complete framework for numerical calculation of the power spectrum and bispectrum in canonical inflation with an arbitrary number of light or heavy fields. Our method includes all relevant effects at tree-level in the loop expansion, including (i) interference between growing and decaying modes near horizon exit; (ii) correlation and coupling between species near horizon exit and on superhorizon scales; (iii) contributions from mass terms; and (iv) all contributions from coupling to gravity. We track the evolution of each correlation function from the vacuum state through horizon exit and the superhorizon regime, with no need to match quantum and classical parts of the calculation; when integrated, our approach corresponds exactly with the tree-level Schwinger or 'in-in' formulation of quantum field theory. In this paper we give the equations necessary to evolve all two- and three-point correlation functions together with suitable initial conditions. The final formalism is suitable to compute the amplitude, shape, and scale dependence of the bispectrum in models with vertical stroke f_N_L vertical stroke of order unity or less, which are a target for future galaxy surveys such as Euclid, DESI and LSST. As an illustration we apply our framework to a number of examples, obtaining quantitatively accurate predictions for their bispectra for the first time. Two accompanying reports describe publicly-available software packages that implement the method.

  20. Numerical simulation of AP1000 LBLOCA with SCDAP/RELAP 4.0 code

    International Nuclear Information System (INIS)

    Xie Heng

    2017-01-01

    The risk of large-break loss of coolant accident (LBLOCA) is that core will be exposed once the accident occurs, and may cause core damages. New phenomena may occur in LBLOCA due to passive safety injection adopted by AP1000. This paper used SCDAP/RELAP5 4.0 to build the numerical model of AP1000 and double-end guillotine of cold leg is simulated. Reactor coolant system and passive core cooling system were modeled by RELAP5 modular. HEAT STRUCTURE component of RELAP5 was used to simulate the fuel rod. The reflood option in RELAP5 was chosen to be activated or not to study the effect of axial heat conduction. Results show that the axial heat conduction plays an important role in the reflooding phase and can effectively shorten reflood process. An alternative core model is built by SCDAP modular. It is found that the SCDAP model predicts higher maximum peak cladding temperature and longer reflood process than RELAP5 model. Analysis shows that clad oxidation heat plays a key role in the reflood. From the simulation results, it can be concluded that the cladding will keep intact and fission product will not be released from fuel to coolant in LBLOCA. (author)

  1. Numerical evaluation of the bispectrum in multiple field inflation. The transport approach with code

    Energy Technology Data Exchange (ETDEWEB)

    Dias, Mafalda [Deutsches Elektronen-Synchrotron (DESY), Hamburg (Germany). Theory Group; Sussex Univ., Brighton (United Kingdom). Astronomy Centre; Frazer, Jonathan [Deutsches Elektronen-Synchrotron (DESY), Hamburg (Germany). Theory Group; Basque Country Univ., Bilbao (Spain). Dept. of Theoretical Physics; IKERBASQUE, Basque Foundation for Science, Bilbao (Spain); Mulryne, David J. [Queen Mary Univ., London (United Kingdom). School of Physics and Astronomy; Seery, David [Sussex Univ., Brighton (United Kingdom). Astronomy Centre

    2016-09-15

    We present a complete framework for numerical calculation of the power spectrum and bispectrum in canonical inflation with an arbitrary number of light or heavy fields. Our method includes all relevant effects at tree-level in the loop expansion, including (i) interference between growing and decaying modes near horizon exit; (ii) correlation and coupling between species near horizon exit and on superhorizon scales; (iii) contributions from mass terms; and (iv) all contributions from coupling to gravity. We track the evolution of each correlation function from the vacuum state through horizon exit and the superhorizon regime, with no need to match quantum and classical parts of the calculation; when integrated, our approach corresponds exactly with the tree-level Schwinger or 'in-in' formulation of quantum field theory. In this paper we give the equations necessary to evolve all two- and three-point correlation functions together with suitable initial conditions. The final formalism is suitable to compute the amplitude, shape, and scale dependence of the bispectrum in models with vertical stroke f{sub NL} vertical stroke of order unity or less, which are a target for future galaxy surveys such as Euclid, DESI and LSST. As an illustration we apply our framework to a number of examples, obtaining quantitatively accurate predictions for their bispectra for the first time. Two accompanying reports describe publicly-available software packages that implement the method.

  2. The influence of time units on the flexibility of the spatial numerical association of response codes effect.

    Science.gov (United States)

    Zhao, Tingting; He, Xianyou; Zhao, Xueru; Huang, Jianrui; Zhang, Wei; Wu, Shuang; Chen, Qi

    2018-05-01

    The Spatial Numerical/Temporal Association of Response Codes (SNARC/STEARC) effects are considered evidence of the association between number or time and space, respectively. As the SNARC effect was proposed by Dehaene, Bossini, and Giraux in 1993, several studies have suggested that different tasks and cultural factors can affect the flexibility of the SNARC effect. This study explored the influence of time units on the flexibility of the SNARC effect via materials with Arabic numbers, which were suffixed with time units and subjected to magnitude comparison tasks. Experiment 1 replicated the SNARC effect for numbers and the STEARC effect for time units. Experiment 2 explored the flexibility of the SNARC effect when numbers were attached to time units, which either conflicted with the numerical magnitude or in which the time units were the same or different. Experiment 3 explored whether the SNARC effect of numbers was stable when numbers were near the transition of two adjacent time units. The results indicate that the SNARC effect was flexible when the numbers were suffixed with time units: Time units influenced the direction of the SNARC effect in a way which could not be accounted for by the mathematical differences between the time units and numbers. This suggests that the SNARC effect is not obligatory and can be easily adapted or inhibited based on the current context. © 2017 The Authors. British Journal of Psychology published by John Wiley & Sons Ltd on behalf of British Psychological Society.

  3. A study on the numerical instability of COBRA-series subchannel analysis codes at low-pressure and low-flow conditions

    International Nuclear Information System (INIS)

    Yoo, Y. J.; Hwnag, T. H.; Kim, K. K.; Ji, S. K.

    2001-01-01

    The numerical instability at low-pressure and low-flow conditions has been confirmed to be the common problem of the existing COBRA-series subchannel analysis codes. In addition, the range of operating conditions at which the analyses by the codes are impossible has been evaluated. To evaluate the MATRA's inapplicable range of operating conditions of the SMART core that is to be operated at the low flow condition, i.e. about 30% of the flow of the existing commercial pressurized water reactors at the steady-state condition, the analyses of various operating conditions were performed by using several representative COBRA-series subchannel analysis codes including MATRA. TORC of CE, COBRA3CP of Siemens/KWU, COBRA4I of PNL, and MATRA of KAERI were chosen as the subchannel analysis codes to be evaluated. The various operating conditions used in the CHF tests carried out at the Winfrith Establishment of UKAEA were chosen as the conditions to be analyzed. As the result, the numerical instabilities at low-pressure and low-flow conditions occurred in the analyses by all of the codes. It was revealed that the MATRA code, which numerically more stable thatn the other codes, was not able to analyze the conditions of the pressure not more than 100 bar and the mass velocity not more than 300 kg/sec-m 2 . Hereafter it is required to find out the exact reason for the numerical instability of the existing COBRA-series subchannel analysis codes at low-pressure and low-flow conditions and to devise the new method to get over that numerical problem

  4. Large-scale thermal convection of viscous fluids in a faulted system: 3D test case for numerical codes

    Science.gov (United States)

    Magri, Fabien; Cacace, Mauro; Fischer, Thomas; Kolditz, Olaf; Wang, Wenqing; Watanabe, Norihiro

    2017-04-01

    In contrast to simple homogeneous 1D and 2D systems, no appropriate analytical solutions exist to test onset of thermal convection against numerical models of complex 3D systems that account for variable fluid density and viscosity as well as permeability heterogeneity (e.g. presence of faults). Owing to the importance of thermal convection for the transport of energy and minerals, the development of a benchmark test for density/viscosity driven flow is crucial to ensure that the applied numerical models accurately simulate the physical processes at hands. The presented study proposes a 3D test case for the simulation of thermal convection in a faulted system that accounts for temperature dependent fluid density and viscosity. The linear stability analysis recently developed by Malkovsky and Magri (2016) is used to estimate the critical Rayleigh number above which thermal convection of viscous fluids is triggered. The numerical simulations are carried out using the finite element technique. OpenGeoSys (Kolditz et al., 2012) and Moose (Gaston et al., 2009) results are compared to those obtained using the commercial software FEFLOW (Diersch, 2014) to test the ability of widely applied codes in matching both the critical Rayleigh number and the dynamical features of convective processes. The methodology and Rayleigh expressions given in this study can be applied to any numerical model that deals with 3D geothermal processes in faulted basins as by example the Tiberas Basin (Magri et al., 2016). References Kolditz, O., Bauer, S., Bilke, L., Böttcher, N., Delfs, J. O., Fischer, T., U. J. Görke, T. Kalbacher, G. Kosakowski, McDermott, C. I., Park, C. H., Radu, F., Rink, K., Shao, H., Shao, H.B., Sun, F., Sun, Y., Sun, A., Singh, K., Taron, J., Walther, M., Wang,W., Watanabe, N., Wu, Y., Xie, M., Xu, W., Zehner, B., 2012. OpenGeoSys: an open-source initiative for numerical simulation of thermo-hydro-mechanical/chemical (THM/C) processes in porous media. Environmental

  5. OCENER, a one-dimensional computer code for the numerical simulation of the mechanical effects of peaceful underground nuclear explosions in rocks

    International Nuclear Information System (INIS)

    Gupta, S.C.; Sikka, S.K.; Chidambaram, R.

    1979-01-01

    An account is given of a one-dimensional spherical symmetric computer code for the numerical simulation of the effects of peaceful underground nuclear explosions in rocks (OCENER). In the code, the nature of the stress field and response of the medium to this field are modelled numerically by finite difference form of the laws of continuum mechanics and the constitutive relations of the rock medium in which the detonation occurs. It enables to approximate well the cavity growth and fracturing of the surrounding rock for contained explosions and the events upto the time the spherical symmetry is valid for cratering-type explosions. (auth.)

  6. Numerical analysis on the calandria tubes in the moderator of a heavy water reactor using OpenFOAM and other codes

    International Nuclear Information System (INIS)

    Chang, S.M.; Kim, H.T.

    2013-01-01

    CANDU, a prototype of heavy water reactor is modeled for the moderator system with porous media buoyancy-effect heat-transfer turbulence model. OpenFOAM, a set of C++ classes and libraries developed under the object-oriented concept, is selected as the tool of numerical analysis. The result from this computational code is compared with experiments and other commercial code data through ANSYS-CFX and COMSOL Multi-physics. The three-dimensional code concerning buoyancy force, turbulence, and heat transfer is tested and shown to be successful for the analysis of thermo-hydraulic system of heavy water reactors. (authors)

  7. Physical models, cross sections, and numerical approximations used in MCNP and GEANT4 Monte Carlo codes for photon and electron absorbed fraction calculation.

    Science.gov (United States)

    Yoriyaz, Hélio; Moralles, Maurício; Siqueira, Paulo de Tarso Dalledone; Guimarães, Carla da Costa; Cintra, Felipe Belonsi; dos Santos, Adimir

    2009-11-01

    Radiopharmaceutical applications in nuclear medicine require a detailed dosimetry estimate of the radiation energy delivered to the human tissues. Over the past years, several publications addressed the problem of internal dose estimate in volumes of several sizes considering photon and electron sources. Most of them used Monte Carlo radiation transport codes. Despite the widespread use of these codes due to the variety of resources and potentials they offered to carry out dose calculations, several aspects like physical models, cross sections, and numerical approximations used in the simulations still remain an object of study. Accurate dose estimate depends on the correct selection of a set of simulation options that should be carefully chosen. This article presents an analysis of several simulation options provided by two of the most used codes worldwide: MCNP and GEANT4. For this purpose, comparisons of absorbed fraction estimates obtained with different physical models, cross sections, and numerical approximations are presented for spheres of several sizes and composed as five different biological tissues. Considerable discrepancies have been found in some cases not only between the different codes but also between different cross sections and algorithms in the same code. Maximum differences found between the two codes are 5.0% and 10%, respectively, for photons and electrons. Even for simple problems as spheres and uniform radiation sources, the set of parameters chosen by any Monte Carlo code significantly affects the final results of a simulation, demonstrating the importance of the correct choice of parameters in the simulation.

  8. Development of a numerical code for the prediction of the long-term behavior of the underground facilities for the high-level radioactive waste disposal

    International Nuclear Information System (INIS)

    Sawada, Masataka; Okada, Tetsuji; Hasegawa, Takuma

    2006-01-01

    Complicated phenomena originated by thermo-hydro-mechanical coupling behavior will occur in the near-field of geological disposal of nuclear waste. Development of a numerical evaluation method for such phenomena is important in order to make a reasonable repository design and a safety assessment. In order to achieve the objective above, a numerical model using the equations which can evaluate the swelling characteristics of buffer materials based on the diffusive double layer theory is proposed, and a numerical scheme for the thermo-hydro-mechanical coupled analysis including the swelling model is constructed. The proposed swelling model can reproduce the behavior observed during both swelling pressure tests and swelling deformation tests. When the developed numerical code is applied to the laboratory heater test using a bentonite specimen, it can reproduce the thermal gradient, the distribution of saturation rate and the variation of porosity. The developed numerical code will be applied to well-controlled laboratory tests and full-scale in-situ tests in the future work. In order to apply to the various geochemical conditions around the engineered barrier, chemical component will be coupled to the present numerical code. (author)

  9. A numerical similarity approach for using retired Current Procedural Terminology (CPT) codes for electronic phenotyping in the Scalable Collaborative Infrastructure for a Learning Health System (SCILHS).

    Science.gov (United States)

    Klann, Jeffrey G; Phillips, Lori C; Turchin, Alexander; Weiler, Sarah; Mandl, Kenneth D; Murphy, Shawn N

    2015-12-11

    Interoperable phenotyping algorithms, needed to identify patient cohorts meeting eligibility criteria for observational studies or clinical trials, require medical data in a consistent structured, coded format. Data heterogeneity limits such algorithms' applicability. Existing approaches are often: not widely interoperable; or, have low sensitivity due to reliance on the lowest common denominator (ICD-9 diagnoses). In the Scalable Collaborative Infrastructure for a Learning Healthcare System (SCILHS) we endeavor to use the widely-available Current Procedural Terminology (CPT) procedure codes with ICD-9. Unfortunately, CPT changes drastically year-to-year - codes are retired/replaced. Longitudinal analysis requires grouping retired and current codes. BioPortal provides a navigable CPT hierarchy, which we imported into the Informatics for Integrating Biology and the Bedside (i2b2) data warehouse and analytics platform. However, this hierarchy does not include retired codes. We compared BioPortal's 2014AA CPT hierarchy with Partners Healthcare's SCILHS datamart, comprising three-million patients' data over 15 years. 573 CPT codes were not present in 2014AA (6.5 million occurrences). No existing terminology provided hierarchical linkages for these missing codes, so we developed a method that automatically places missing codes in the most specific "grouper" category, using the numerical similarity of CPT codes. Two informaticians reviewed the results. We incorporated the final table into our i2b2 SCILHS/PCORnet ontology, deployed it at seven sites, and performed a gap analysis and an evaluation against several phenotyping algorithms. The reviewers found the method placed the code correctly with 97 % precision when considering only miscategorizations ("correctness precision") and 52 % precision using a gold-standard of optimal placement ("optimality precision"). High correctness precision meant that codes were placed in a reasonable hierarchal position that a reviewer

  10. Arsenic speciation results

    Data.gov (United States)

    U.S. Environmental Protection Agency — Linear combination fitting results of synchrotron data to determine arsenic speciation in soil samples. This dataset is associated with the following publication:...

  11. Chemical Speciation - General Information

    Science.gov (United States)

    This page includes general information about the Chemical Speciation Network that is not covered on the main page. Commonly visited documents, including calendars, site lists, and historical files for the program are listed here

  12. Searching for speciation genes

    DEFF Research Database (Denmark)

    Holt, Benjamin George; Côté, Isabelle M; Emerson, Brent C

    2011-01-01

    Closely related species that show clear phenotypic divergence, but without obvious geographic barriers, can provide opportunities to study how diversification can occur when opportunities for allopatric speciation are limited. We examined genetic divergence in the coral reef fish genus Hypoplectrus...

  13. CONCAWE effluent speciation project

    Energy Technology Data Exchange (ETDEWEB)

    Leonards, P.; Comber, M.; Forbes, S.; Whale, G.; Den Haan, K.

    2010-09-15

    In preparation for the implementation of the EU REACH regulation, a project was undertaken to transfer the high-resolution analytical method for determining hydrocarbon blocks in petroleum products by comprehensive two-dimensional gas chromatography (GCxGC) to a laboratory external to the petroleum industry (Institute for Environmental Studies (IVM) of the VU University of Amsterdam). The method was validated and used for the analysis of petroleum hydrocarbons extracted from refinery effluents. The report describes the technology transfer and the approaches used to demonstrate the successful transfer and application of the GCxGC methodology from analysing petroleum products to the quantitative determination of hydrocarbon blocks in refinery effluents. The report describes all the methods used for all the determinations on the effluent samples along with an overview of the results obtained which are presented in summary tables and graphs. These data have significantly improved CONCAWE's knowledge of what refineries emit in their effluents. A total of 111 Effluent Discharge Samples from 105 CONCAWE refineries in Europe were obtained in the period June 2008 to March 2009. These effluents were analysed for metals, standard effluent parameters (including COD, BOD), oil in water, BTEX and volatile organic compounds. The hydrocarbon speciation determinations and other hydrocarbon analyses are also reported. The individual refinery analytical results are included into this report, coded as per the CONCAWE system. These data will be, individually, communicated to companies and refineries. The report demonstrates that it is feasible to conduct a research programme to investigate the fate and effects of hydrocarbon blocks present in discharged refinery effluents.

  14. Uranium speciation in plants

    International Nuclear Information System (INIS)

    Guenther, A.; Bernhard, G.; Geipel, G.; Reich, T.; Rossberg, A.; Nitsche, H.

    2003-01-01

    Detailed knowledge of the nature of uranium complexes formed after the uptake by plants is an essential prerequisite to describe the migration behavior of uranium in the environment. This study focuses on the determination of uranium speciation after uptake of uranium by lupine plants. For the first time, time-resolved laser-induced fluorescence spectroscopy and X-ray absorption spectroscopy were used to determine the chemical speciation of uranium in plants. Differences were detected between the uranium speciation in the initial solution (hydroponic solution and pore water of soil) and inside the lupine plants. The oxidation state of uranium did not change and remained hexavalent after it was taken up by the lupine plants. The chemical speciation of uranium was identical in the roots, shoot axis, and leaves and was independent of the uranium speciation in the uptake solution. The results indicate that the uranium is predominantly bound as uranyl(VI) phosphate to the phosphoryl groups. Dandelions and lamb's lettuce showed uranium speciation identical to lupine plants. (orig.)

  15. Numerical simulation of self-priming phenomena in venturi scrubber by two-phase flow simulation code TPFIT

    International Nuclear Information System (INIS)

    Horiguchi, Naoki; Kanagawa, Tetsuya; Kaneko, Akiko; Abe, Yutaka; Yoshida, Hiroyuki

    2015-01-01

    In the wake of Fukushima Daiichi nuclear disaster, reviews of the safety of nuclear facilities have been conducted in the world beginning with Japan. Countermeasures against severe accidents in nuclear power plants are an urgent need. In particular, from the viewpoint of protecting containment and suppressing diffusion of the radioactive materials, it is important to install filtered venting devices to release high pressure pollutant gas to the atmosphere with elimination radioactive materials in the gas. One of the devices for the filtered venting is a Multi venturi scrubber system (MVSS), which is used to realize filtered venting without any power supply in European reactors. The MVSS is composed of a “venturi Scrubbers” part, in which there are hundreds of the venturi scrubbers, and a “bubble column” part. In the MVSS, all of the venturi scrubbers is branched off from a vent line which connect between the containment and the MVSS. In an operation mode of the MVSS, the radioactive materials are eliminated through the gas-liquid interface from the pollutant gas to the liquid phase of a dispersed flow in the venturi scrubber and a bubbly flow in the bubble column part. The dispersed flow is formed from the liquid, which is suctioned from around the venturi scrubber through the hole for suction (called self-priming). In previous studies, an evaluation method for the scrubbing performance of the venturi scrubber was developed. However, actual hydraulic behavior in it is too complicated, the previous evaluation was not validated the hydraulic behavior and studied the effect of differences between the simulated hydraulic behavior and an actual one on the performance of the venturi scrubber. To develop a validated evaluation method for the scrubbing performance, it is important to develop detailed evaluation method for the hydraulic behavior in the venturi scrubber. To simulate the complicated hydraulic behavior, we consider to use analysis code TPFIT. Then, the

  16. Coupling calculation of CFD-ACE computational fluid dynamics code and DeCART whole-core neutron transport code for development of numerical reactor

    International Nuclear Information System (INIS)

    Shin, Chang Hwan; Seo, Kyong Won; Chun, Tae Hyun; Kim, Kang Seog

    2005-03-01

    Code coupling activities have so far focused on coupling the neutronics modules with the CFD module. An interface module for the CFD-ACE/DeCART coupling was established as an alternative to the original STAR-CD/DeCART interface. The interface module for DeCART/CFD-ACE was validated by single-pin model. The optimized CFD mesh was decided through the calculation of multi-pin model. It was important to consider turbulent mixing of subchannels for calculation of fuel temperature. For the parallel calculation, the optimized decompose process was necessary to reduce the calculation costs and setting of the iteration and convergence criterion for each code was important, too

  17. Coupling calculation of CFD-ACE computational fluid dynamics code and DeCART whole-core neutron transport code for development of numerical reactor

    Energy Technology Data Exchange (ETDEWEB)

    Shin, Chang Hwan; Seo, Kyong Won; Chun, Tae Hyun; Kim, Kang Seog

    2005-03-15

    Code coupling activities have so far focused on coupling the neutronics modules with the CFD module. An interface module for the CFD-ACE/DeCART coupling was established as an alternative to the original STAR-CD/DeCART interface. The interface module for DeCART/CFD-ACE was validated by single-pin model. The optimized CFD mesh was decided through the calculation of multi-pin model. It was important to consider turbulent mixing of subchannels for calculation of fuel temperature. For the parallel calculation, the optimized decompose process was necessary to reduce the calculation costs and setting of the iteration and convergence criterion for each code was important, too.

  18. Numerical, Analytical, Experimental Study of Fluid Dynamic Forces in Seals Volume 6: Description of Scientific CFD Code SCISEAL

    Science.gov (United States)

    Athavale, Mahesh; Przekwas, Andrzej

    2004-01-01

    The objectives of the program were to develop computational fluid dynamics (CFD) codes and simpler industrial codes for analyzing and designing advanced seals for air-breathing and space propulsion engines. The CFD code SCISEAL is capable of producing full three-dimensional flow field information for a variety of cylindrical configurations. An implicit multidomain capability allow the division of complex flow domains to allow optimum use of computational cells. SCISEAL also has the unique capability to produce cross-coupled stiffness and damping coefficients for rotordynamic computations. The industrial codes consist of a series of separate stand-alone modules designed for expeditious parametric analyses and optimization of a wide variety of cylindrical and face seals. Coupled through a Knowledge-Based System (KBS) that provides a user-friendly Graphical User Interface (GUI), the industrial codes are PC based using an OS/2 operating system. These codes were designed to treat film seals where a clearance exists between the rotating and stationary components. Leakage is inhibited by surface roughness, small but stiff clearance films, and viscous pumping devices. The codes have demonstrated to be a valuable resource for seal development of future air-breathing and space propulsion engines.

  19. MicroHH 1.0: a computational fluid dynamics code for direct numerical simulation and large-eddy simulation of atmospheric boundary layer flows

    Science.gov (United States)

    van Heerwaarden, Chiel C.; van Stratum, Bart J. H.; Heus, Thijs; Gibbs, Jeremy A.; Fedorovich, Evgeni; Mellado, Juan Pedro

    2017-08-01

    This paper describes MicroHH 1.0, a new and open-source (www.microhh.org) computational fluid dynamics code for the simulation of turbulent flows in the atmosphere. It is primarily made for direct numerical simulation but also supports large-eddy simulation (LES). The paper covers the description of the governing equations, their numerical implementation, and the parameterizations included in the code. Furthermore, the paper presents the validation of the dynamical core in the form of convergence and conservation tests, and comparison of simulations of channel flows and slope flows against well-established test cases. The full numerical model, including the associated parameterizations for LES, has been tested for a set of cases under stable and unstable conditions, under the Boussinesq and anelastic approximations, and with dry and moist convection under stationary and time-varying boundary conditions. The paper presents performance tests showing good scaling from 256 to 32 768 processes. The graphical processing unit (GPU)-enabled version of the code can reach a speedup of more than an order of magnitude for simulations that fit in the memory of a single GPU.

  20. Numerical relativity

    International Nuclear Information System (INIS)

    Piran, T.

    1982-01-01

    There are many recent developments in numerical relativity, but there remain important unsolved theoretical and practical problems. The author reviews existing numerical approaches to solution of the exact Einstein equations. A framework for classification and comparison of different numerical schemes is presented. Recent numerical codes are compared using this framework. The discussion focuses on new developments and on currently open questions, excluding a review of numerical techniques. (Auth.)

  1. Polarographic validation of chemical speciation models

    International Nuclear Information System (INIS)

    Duffield, J.R.; Jarratt, J.A.

    2001-01-01

    It is well established that the chemical speciation of an element in a given matrix, or system of matrices, is of fundamental importance in controlling the transport behaviour of the element. Therefore, to accurately understand and predict the transport of elements and compounds in the environment it is a requirement that both the identities and concentrations of trace element physico-chemical forms can be ascertained. These twin requirements present the analytical scientist with considerable challenges given the labile equilibria, the range of time scales (from nanoseconds to years) and the range of concentrations (ultra-trace to macro) that may be involved. As a result of this analytical variability, chemical equilibrium modelling has become recognised as an important predictive tool in chemical speciation analysis. However, this technique requires firm underpinning by the use of complementary experimental techniques for the validation of the predictions made. The work reported here has been undertaken with the primary aim of investigating possible methodologies that can be used for the validation of chemical speciation models. However, in approaching this aim, direct chemical speciation analyses have been made in their own right. Results will be reported and analysed for the iron(II)/iron(III)-citrate proton system (pH 2 to 10; total [Fe] = 3 mmol dm -3 ; total [citrate 3- ] 10 mmol dm -3 ) in which equilibrium constants have been determined using glass electrode potentiometry, speciation is predicted using the PHREEQE computer code, and validation of predictions is achieved by determination of iron complexation and redox state with associated concentrations. (authors)

  2. Validation of Numerical Schemes in a Thermal-Hydraulic Analysis Code for a Natural Convection Heat Transfer of a Molten Pool

    International Nuclear Information System (INIS)

    Kim, Jong Tae; Ha, Kwang Soon; Kim, Hwan Yeol; Park, Rae Joon; Song, Jin Ho

    2010-01-01

    , unsteady turbulence models based on filtered or volume-averaged governing equations have been applied for the turbulent natural convection heat transfer. Tran et al. used large eddy simulation (LES) for the analysis of molten corium coolability. The numerical instability is related to a gravitational force of the molten corium. A staggered grid method on an orthogonal structured grid is used to prohibit a pressure oscillation in the numerical solution. But it is impractical to use the structured grid for a partially filled spherical pool, a cone-type pool or triangular pool. An unstructured grid is an alternative for the nonrectangular pools. In order to remove the checkerboard- like pressure oscillation on the unstructured grid, some special interpolation scheme is required. In order to evaluate in-vessel coolability of the molten corium for a pressurized water reactor (PWR), thermo-hydraulic analysis code LILAC had been developed. LILAC has a capability of multi-layered conjugate heat transfer with melt solidification. A solution domain can be 2-dimensional, axisymmetric, and 3-dimensional. LILAC is based on the unstructured mesh technology to discretized non-rectangular pool geometry. Because of too limited man-power to maintain the code, it becomes more and more difficult to implement new physical and numerical models in the code along with increased complication of the code. Recently, open source CFD code OpenFOAM has been released and applied to many academic and engineering areas. OpenFOAM is based on the very similar numerical schemes to the LILAC code. It has many physical and numerical models for multi-physics analysis. And because it is based on object-oriented programming, it is known that new models can be easily implemented and is very fast with a lower possibility of coding errors. This is a very attractive feature for the development, validation and maintenance of an analysis code. On the contrary to commercial CFD codes, it is possible to modify and add

  3. Implementation and use of Gaussian process meta model for sensitivity analysis of numerical models: application to a hydrogeological transport computer code

    International Nuclear Information System (INIS)

    Marrel, A.

    2008-01-01

    In the studies of environmental transfer and risk assessment, numerical models are used to simulate, understand and predict the transfer of pollutant. These computer codes can depend on a high number of uncertain input parameters (geophysical variables, chemical parameters, etc.) and can be often too computer time expensive. To conduct uncertainty propagation studies and to measure the importance of each input on the response variability, the computer code has to be approximated by a meta model which is build on an acceptable number of simulations of the code and requires a negligible calculation time. We focused our research work on the use of Gaussian process meta model to make the sensitivity analysis of the code. We proposed a methodology with estimation and input selection procedures in order to build the meta model in the case of a high number of inputs and with few simulations available. Then, we compared two approaches to compute the sensitivity indices with the meta model and proposed an algorithm to build prediction intervals for these indices. Afterwards, we were interested in the choice of the code simulations. We studied the influence of different sampling strategies on the predictiveness of the Gaussian process meta model. Finally, we extended our statistical tools to a functional output of a computer code. We combined a decomposition on a wavelet basis with the Gaussian process modelling before computing the functional sensitivity indices. All the tools and statistical methodologies that we developed were applied to the real case of a complex hydrogeological computer code, simulating radionuclide transport in groundwater. (author) [fr

  4. PLASTEF: a code for the numerical simulation of thermoelastoplastic behaviour of materials using the finite element method

    International Nuclear Information System (INIS)

    Basombrio, F.G.; Sanchez Sarmiento, G.

    1978-01-01

    A general code for solving two-dimensional thermo-elastoplastic problems in geometries of arbitrary shape using the finite element method, is presented. The initial stress incremental procedure was adopted, for given histories of load and temperature. Some classical applications are included. (Auth.)

  5. Benchmarking numerical codes for tracer transport with the aid of laboratory-scale experiments in 2D heterogeneous porous media.

    Science.gov (United States)

    Maina, Fadji Hassane; Ackerer, Philippe; Younes, Anis; Guadagnini, Alberto; Berkowitz, Brian

    2017-06-07

    We present a combined experimental and numerical modeling study that addresses two principal questions: (i) is any particular Eulerian-based method used to solve the classical advection-dispersion equation (ADE) clearly superior (relative to the others), in terms of yielding solutions that reproduce BTCs of the kind that are typically sampled at the outlet of a laboratory cell? and (ii) in the presence of matches of comparable quality against such BTCs, do any of these methods render different (or similar) numerical BTCs at locations within the domain? To address these questions, we obtained measurements from carefully controlled laboratory experiments, and employ them as a reference against which numerical results are benchmarked and compared. The experiments measure solute transport breakthrough curves (BTCs) through a square domain containing various configurations of coarse, medium, and fine quartz sand. The approaches to solve the ADE involve Eulerian-Lagrangian and Eulerian (finite volume, finite elements, mixed and discontinuous finite elements) numerical methods. Model calibration is not examined; permeability and porosity of each sand were determined previously through separate, standard laboratory tests, while dispersivities are assigned values proportional to mean grain size. We find that the spatial discretization of the flow field is of critical importance, due to the non-uniformity of the domain. Although simulated BTCs at the system outlet are observed to be very similar for these various numerical methods, computed local (point-wise, inside the domain) BTCs can be very different. We find that none of the numerical methods is able to fully reproduce the measured BTCs. The impact of model parameter uncertainty on the calculated BTCs is characterized through a set of numerical Monte Carlo simulations; in cases where the impact is significant, assessment of simulation matches to the experimental data can be ambiguous. Copyright © 2017 Elsevier B.V. All

  6. Code-experiment comparison on wall condensation tests in the presence of non-condensable gases-Numerical calculations for containment studies

    Energy Technology Data Exchange (ETDEWEB)

    Malet, J., E-mail: jeanne.malet@irsn.fr [Institut de Radioprotection et de Surete Nucleaire (IRSN), PSN-RES, SCA, BP 68, 91192 Gif-sur-Yvette (France); Porcheron, E.; Dumay, F.; Vendel, J. [Institut de Radioprotection et de Surete Nucleaire (IRSN), PSN-RES, SCA, BP 68, 91192 Gif-sur-Yvette (France)

    2012-12-15

    Highlights: Black-Right-Pointing-Pointer Steam condensation on walls has been investigated in the TOSQAN vessel. Black-Right-Pointing-Pointer Experiments on 7 different tests have been performed. Black-Right-Pointing-Pointer Different steam injections and wall temperatures are used. Black-Right-Pointing-Pointer Simulations are performed in 2D using the TONUS code. Black-Right-Pointing-Pointer Code-experiments comparisons at many different locations show a good agreement. - Abstract: During the course of a severe Pressurized Water Reactor accident, pressurization of the containment occurs and hydrogen can be produced by the reactor core oxidation and distributed in the containment according to convection flows and wall condensation. Filmwise wall condensation in the presence of non-condensable gases is a subject of many interests and extensive studies have been performed in the past. Some empirical correlations have demonstrated their limit for extrapolation under different thermal-hydraulic conditions and at different geometries/scales. The French Institute for Radiological Protection and Nuclear Safety (IRSN) has developed a numerical tool and an experimental facility in order to investigate free convection flows in the presence of condensation. The objective of this paper is to present numerical results obtained on different wall condensation tests in 7 m{sup 3} volume vessel (TOSQAN facility), and to compare them with the experimental ones. Over eight tests are considered here, and code-experiment comparison is performed on many different locations, giving an extensive insight of the code assessment for air-steam mixture flows involving wall condensation in the presence of non-condensable gases.

  7. Arsenic Speciation in Groundwater: Role of Thioanions

    Science.gov (United States)

    The behavior of arsenic in groundwater environments is fundamentally linked to its speciation. Understanding arsenic speciation is important because chemical speciation impacts reactivity, bioavailability, toxicity, and transport and fate processes. In aerobic environments arsen...

  8. Simulation of guided-wave ultrasound propagation in composite laminates: Benchmark comparisons of numerical codes and experiment.

    Science.gov (United States)

    Leckey, Cara A C; Wheeler, Kevin R; Hafiychuk, Vasyl N; Hafiychuk, Halyna; Timuçin, Doğan A

    2018-03-01

    Ultrasonic wave methods constitute the leading physical mechanism for nondestructive evaluation (NDE) and structural health monitoring (SHM) of solid composite materials, such as carbon fiber reinforced polymer (CFRP) laminates. Computational models of ultrasonic wave excitation, propagation, and scattering in CFRP composites can be extremely valuable in designing practicable NDE and SHM hardware, software, and methodologies that accomplish the desired accuracy, reliability, efficiency, and coverage. The development and application of ultrasonic simulation approaches for composite materials is an active area of research in the field of NDE. This paper presents comparisons of guided wave simulations for CFRP composites implemented using four different simulation codes: the commercial finite element modeling (FEM) packages ABAQUS, ANSYS, and COMSOL, and a custom code executing the Elastodynamic Finite Integration Technique (EFIT). Benchmark comparisons are made between the simulation tools and both experimental laser Doppler vibrometry data and theoretical dispersion curves. A pristine and a delamination type case (Teflon insert in the experimental specimen) is studied. A summary is given of the accuracy of simulation results and the respective computational performance of the four different simulation tools. Published by Elsevier B.V.

  9. Numerical modeling of the Linac4 negative ion source extraction region by 3D PIC-MCC code ONIX

    CERN Document Server

    Mochalskyy, S; Minea, T; Lifschitz, AF; Schmitzer, C; Midttun, O; Steyaert, D

    2013-01-01

    At CERN, a high performance negative ion (NI) source is required for the 160 MeV H- linear accelerator Linac4. The source is planned to produce 80 mA of H- with an emittance of 0.25 mm mradN-RMS which is technically and scientifically very challenging. The optimization of the NI source requires a deep understanding of the underling physics concerning the production and extraction of the negative ions. The extraction mechanism from the negative ion source is complex involving a magnetic filter in order to cool down electrons’ temperature. The ONIX (Orsay Negative Ion eXtraction) code is used to address this problem. The ONIX is a selfconsistent 3D electrostatic code using Particles-in-Cell Monte Carlo Collisions (PIC-MCC) approach. It was written to handle the complex boundary conditions between plasma, source walls, and beam formation at the extraction hole. Both, the positive extraction potential (25kV) and the magnetic field map are taken from the experimental set-up, in construction at CERN. This contrib...

  10. Development and experimental assessment of a numerical modelling code to aid the design of profile extrusion cooling tools

    Science.gov (United States)

    Carneiro, O. S.; Rajkumar, A.; Fernandes, C.; Ferrás, L. L.; Habla, F.; Nóbrega, J. M.

    2017-10-01

    On the extrusion of thermoplastic profiles, upon the forming stage that takes place in the extrusion die, the profile must be cooled in a metallic calibrator. This stage must be done at a high rate, to assure increased productivity, but avoiding the development of high temperature gradients, in order to minimize the level of induced thermal residual stresses. In this work, we present a new coupled numerical solver, developed in the framework of the OpenFOAM® computational library, that computes the temperature distribution in both domains simultaneously (metallic calibrator and plastic profile), whose implementation aimed the minimization of the computational time. The new solver was experimentally assessed with an industrial case study.

  11. Numerical simulation on the screw pinch by 2-D MHD pinch code 'topics' including impurities and neutrals effects

    International Nuclear Information System (INIS)

    Nagata, A.; Ashida, H.; Okamoto, M.; Hirano, K.

    1981-03-01

    Two dimentional fluid simulation code ''TOPICS'' is developed for the STP-2, the shock heated screw pinch at Nagoya. It involves the effects of impurity ions and neutral atoms. In order to estimate the radiation losses, the impurity continuity equations with ionizations and recombinations are solved simultaneously with the plasma fluid equations. The results are compared with the coronal equilibrium model. It is found that the coronal equilibrium model underestimates the radiation losses from shock heated pinch plasmas in its initial dynamic phase. The present calculations including impurities and neutrals show the importance of the radiation losses from the plasma of the STP-2. Introducing the anomalous resistivity caused by the ion acoustic instability, the observed magnetic field penetration is explained fairly well. (author)

  12. Comparisons of numerical simulations with ASTRID code against experimental results in rod bundle geometry for boiling flows

    International Nuclear Information System (INIS)

    Larrauri, D.; Briere, E.

    1997-12-01

    After different validation simulations of flows through cylindrical and annular channels, a subcooled boiling flow through a rod bundle has been simulated with ASTRID Steam-Water of software. The experiment simulated is called Poseidon. It is a vertical rectangular channel with three heating rods inside. The thermohydraulic conditions of the simulated flow were close to the DNB conditions. The simulation results were analysed and compared against the available measurements of liquid and wall temperatures. ASTRID Steam-Water produced satisfactory results. The wall and the liquid temperatures were well predicted in the different parts of the flow. The void fraction reached 40 % in the vicinity of the heating rods. The distribution of the different calculated variables showed that a three-dimensional simulation gives essential information for the analysis of the physical phenomena involved in this kind of flow. The good results obtained in Poseidon geometry will encourage future rod bundle flow simulations and analyses with ASTRID Steam-Water code. (author)

  13. The FlatModel: a 2D numerical code to evaluate debris flow dynamics. Eastern Pyrenees basins application.

    Science.gov (United States)

    Bateman, A.; Medina, V.; Hürlimann, M.

    2009-04-01

    Debris flows are present in every country where a combination of high mountains and flash floods exists. In the northern part of the Iberian Peninsula, at the Pyrenees, sporadic debris events occur. We selected two different events. The first one was triggered at La Guingueta by the big exceptional flood event that produced many debris flows in 1982 which were spread all over the Catalonian Pyrenees. The second, more local event occurred in 2000 at the mountain Montserrat at the Pre-litoral mountain chain. We present here some results of the FLATModel, entirely developed at the Research Group in Sediment Transport of the Hydraulic, Marine and Environmental Engineering Department (GITS-UPC). The 2D FLATModel is a Finite Volume method that uses the Godunov scheme. Some numerical arranges have been made to analyze the entrainment process during the events, the Stop & Go phenomena and the final deposit of the material. The material rheology implemented is the Voellmy approach, because it acts very well evaluating the frictional and turbulent behavior. The FLATModel uses a GIS environment that facilitates the data analysis as the comparison between field and numerical data. The two events present two different characteristics, one is practically a one dimensional problem of 1400 m in length and the other has a more two dimensional behavior that forms a big fan.

  14. A rational method to evaluate tornado-borne missile speed in nuclear power plants. Validation of a numerical code based on Fujita's tornado model

    International Nuclear Information System (INIS)

    Eguchi, Yuzuru; Sugimoto, Soichiro; Hattori, Yasuo; Hirakuchi, Hiromaru

    2015-01-01

    Explanation is given about a rational method to evaluate tornado-borne missile speed, flight distance and flight height to be used for safety design of a nuclear power plant. In the method, the authors employed Fujita's DBT-77 model as a tornado wind model to take the near-ground tornado wind profile into account. A liftoff model of an object on the ground was developed by conservatively modeling the lift force due to ground effect. The wind field model and the liftoff model have been compiled together with a conventional flight model into a computer code, named TONBOS. In this study, especially, the code is verified for one- and two-dimensional free-fall problems as well as a case of 1957 Dallas tornado wind field model, whose solutions are theoretically or numerically known. Finally, the code is validated by typical car behaviors characterized by tornado wind speeds of the enhanced Fujita scale, as well as by an actual event where a truck was blown away by a tornado which struck a part of the town of Saroma, Hokkaido in November, 2006. (author)

  15. LSENS: A General Chemical Kinetics and Sensitivity Analysis Code for homogeneous gas-phase reactions. Part 1: Theory and numerical solution procedures

    Science.gov (United States)

    Radhakrishnan, Krishnan

    1994-01-01

    LSENS, the Lewis General Chemical Kinetics and Sensitivity Analysis Code, has been developed for solving complex, homogeneous, gas-phase chemical kinetics problems and contains sensitivity analysis for a variety of problems, including nonisothermal situations. This report is part 1 of a series of three reference publications that describe LENS, provide a detailed guide to its usage, and present many example problems. Part 1 derives the governing equations and describes the numerical solution procedures for the types of problems that can be solved. The accuracy and efficiency of LSENS are examined by means of various test problems, and comparisons with other methods and codes are presented. LSENS is a flexible, convenient, accurate, and efficient solver for chemical reaction problems such as static system; steady, one-dimensional, inviscid flow; reaction behind incident shock wave, including boundary layer correction; and perfectly stirred (highly backmixed) reactor. In addition, the chemical equilibrium state can be computed for the following assigned states: temperature and pressure, enthalpy and pressure, temperature and volume, and internal energy and volume. For static problems the code computes the sensitivity coefficients of the dependent variables and their temporal derivatives with respect to the initial values of the dependent variables and/or the three rate coefficient parameters of the chemical reactions.

  16. Brayton Cycle Numerical Modeling using the RELAP5-3D code, version 4.3.4

    Energy Technology Data Exchange (ETDEWEB)

    Longhini, Eduardo P.; Lobo, Paulo D.C.; Guimarães, Lamartine N.F.; Filho, Francisco A.B.; Ribeiro, Guilherme B., E-mail: edu_longhini@yahoo.com.br [Instituto de Estudos Avançados (IEAv), São José dos Campos, SP (Brazil). Divisão de Energia Nuclear

    2017-07-01

    This work contributes to enable and develop technologies to mount fast micro reactors, to generate heat and electric energy, for the purpose to warm and to supply electrically spacecraft equipment and, also, the production of nuclear space propulsion effect. So, for this purpose, the Brayton Cycle demonstrates to be an optimum approach for space nuclear power. The Brayton thermal cycle gas has as characteristic to be a closed cycle, with two adiabatic processes and two isobaric processes. The components performing the cycle's processes are compressor, turbine, heat source, cold source and recuperator. Therefore, the working fluid's mass flow runs the thermal cycle that converts thermal energy into electrical energy, able to use in spaces and land devices. The objective is numerically to model the Brayton thermal cycle gas on nominal operation with one turbomachine composed for a radial-inflow compressor and turbine of a 40.8 kWe Brayton Rotating Unit (BRU). The Brayton cycle numerical modeling is being performed with the program RELAP5-3D, version 4.3.4. The nominal operation uses as working fluid a mixture 40 g/mole He-Xe with a flow rate of 1.85 kg/s, shaft rotational speed of 45 krpm, compressor and turbine inlet temperature of 400 K and 1149 K, respectively, and compressor exit pressure 0.931 MPa. Then, the aim is to get physical corresponding data to operate each cycle component and the general cycle on this nominal operation. (author)

  17. Brayton Cycle Numerical Modeling using the RELAP5-3D code, version 4.3.4

    International Nuclear Information System (INIS)

    Longhini, Eduardo P.; Lobo, Paulo D.C.; Guimarães, Lamartine N.F.; Filho, Francisco A.B.; Ribeiro, Guilherme B.

    2017-01-01

    This work contributes to enable and develop technologies to mount fast micro reactors, to generate heat and electric energy, for the purpose to warm and to supply electrically spacecraft equipment and, also, the production of nuclear space propulsion effect. So, for this purpose, the Brayton Cycle demonstrates to be an optimum approach for space nuclear power. The Brayton thermal cycle gas has as characteristic to be a closed cycle, with two adiabatic processes and two isobaric processes. The components performing the cycle's processes are compressor, turbine, heat source, cold source and recuperator. Therefore, the working fluid's mass flow runs the thermal cycle that converts thermal energy into electrical energy, able to use in spaces and land devices. The objective is numerically to model the Brayton thermal cycle gas on nominal operation with one turbomachine composed for a radial-inflow compressor and turbine of a 40.8 kWe Brayton Rotating Unit (BRU). The Brayton cycle numerical modeling is being performed with the program RELAP5-3D, version 4.3.4. The nominal operation uses as working fluid a mixture 40 g/mole He-Xe with a flow rate of 1.85 kg/s, shaft rotational speed of 45 krpm, compressor and turbine inlet temperature of 400 K and 1149 K, respectively, and compressor exit pressure 0.931 MPa. Then, the aim is to get physical corresponding data to operate each cycle component and the general cycle on this nominal operation. (author)

  18. Hitchhiking to speciation.

    Directory of Open Access Journals (Sweden)

    Daven C Presgraves

    Full Text Available The modern evolutionary synthesis codified the idea that species exist as distinct entities because intrinsic reproductive barriers prevent them from merging together. Understanding the origin of species therefore requires understanding the evolution and genetics of reproductive barriers between species. In most cases, speciation is an accident that happens as different populations adapt to different environments and, incidentally, come to differ in ways that render them reproductively incompatible. As with other reproductive barriers, the evolution and genetics of interspecific hybrid sterility and lethality were once also thought to evolve as pleiotripic side effects of adaptation. Recent work on the molecular genetics of speciation has raised an altogether different possibility-the genes that cause hybrid sterility and lethality often come to differ between species not because of adaptation to the external ecological environment but because of internal evolutionary arms races between selfish genetic elements and the genes of the host genome. Arguably one of the best examples supporting a role of ecological adaptation comes from a population of yellow monkey flowers, Mimulus guttatus, in Copperopolis, California, which recently evolved tolerance to soil contaminants from copper mines and simultaneously, as an incidental by-product, hybrid lethality in crosses with some off-mine populations. However, in new work, Wright and colleagues show that hybrid lethality is not a pleiotropic consequence of copper tolerance. Rather, the genetic factor causing hybrid lethality is tightly linked to copper tolerance and spread to fixation in Copperopolis by genetic hitchhiking.

  19. Speciation analysis of radionuclides

    International Nuclear Information System (INIS)

    Salbu, B.

    2010-01-01

    Full text: Naturally occurring and artificially produced radionuclides in the environment can be present in different physico-chemical forms (i. e. radionuclide species) varying in size (nominal molecular mass), charge properties and valence, oxidation state, structure and morphology, density, complexing ability etc. Low molecular mass (LMM) species are believed to be mobile and potentially bioavailable, while high molecular mass (HMM) species such as colloids, polymers, pseudocolloids and particles are considered inert. Due to time dependent transformation processes such as mobilization of radionuclide species from solid phases or interactions of mobile and reactive radionuclide species with components in soils and sediments, however, the original distribution of radionuclides deposited in ecosystems will change over time and influence the ecosystem behaviour. To assess the environmental impact from radionuclide contamination, information on radionuclide species deposited, interactions within affected ecosystems and the time-dependent distribution of radionuclide species influencing mobility and biological uptake is essential. The development of speciation techniques to characterize radionuclide species in waters, soils and sediments should therefore be essential for improving the prediction power of impact and risk assessment models. The present paper reviews fractionation techniques which should be utilised for radionuclide speciation purposes. (author)

  20. Three-dimensional numerical investigation of a Molten Salt reactor concept with the code CFX-5.5

    International Nuclear Information System (INIS)

    Yamaji, B.; Csom, G.; Aszodi, A.

    2002-01-01

    Partitioning and transmutation of actinides and long-lived fission products is a promising option to extend the possibilities and enhance the environmentally acceptable capabilities of nuclear energy. Also the possible implementation of the thorium cycle is considered as a way to reduce the problem of energy resources in the future. For both objectives different molten salt reactor concepts were proposed mainly based on the Molten Salt Reactor Experiment of the Oak Ridge National Laboratory. Not only critical reactors but also accelerator-driven subcritical systems (ADSs) have advantages worth considering for those aims, especially those ones with liquid fuel, such as molten salts. By using liquid fuel which is the coolant medium, too, a basically different thermalhydraulic behavior is expected than in the case of solid fuel and water coolant. In this work our purpose is to present the possible use of Computational Fluid Dynamics (CFD) technology in molten salt thermal hydraulics. The simulations were performed with the three-dimensional code CFX-5.5.(author)

  1. Numerical simulation of the direct contact condensation phenomena for PTS-related in single and combined-effect thermal hydraulic test facilities using TransAT CMFD code

    Energy Technology Data Exchange (ETDEWEB)

    Kadi, Rabah, E-mail: kadi.rkhaled@hotmail.com [Laboratory for Thermal-Hydraulics, Nuclear Research Center of Birine (Algeria); Aissani, Slimane [Hydrocarbons and Chemistry Faculty, University of Boumerdes (Algeria); Bouam, Abdellah [Laboratory for Thermal-Hydraulics, Nuclear Research Center of Birine (Algeria)

    2015-11-15

    Highlights: • TransAT CMFD code application to DCC phenomenon. • LEIS methodology to predict the condensing steam flow rate. • Validation of interfacial phase-change heat transfer and turbulence models. • Correction of damping function at the free surface region. • Numerical validation of previous models using LIM and KAERI & KAIST test facilities. - Abstract: The use of CFD for the industrial studies related to PTS, including DCC is already possible; improvements of the two-phase modeling capabilities have to be undertaken to qualify the codes for the simulation of such flows. The DCC in horizontally stratified flow regime constitutes very considerable challenge exercises for a computational fluid dynamics (CFD) simulation of the thermal hydraulics PTS phenomenon because the interplay between turbulence and interfacial heat and mass transfer problem. The main purpose of our study is to investigate numerically the DCC in horizontally stratified steam water flow in a 2D and 3D channel using TransAT CMFD code. The new methodology known as Large-Eddy & Interface (LEIS) have been implemented for treatment of turbulence combined with interface tracking ITM (level set approach). Among of the so-called ‘coarse-grained’ ITM's models, the modified original surface divergence has been chosen as well as the treatment of the turbulence by URANS and VLES. This contribution addressed on the validation of interfacial phase-change heat transfer and turbulence models with special correction of the damping function at the free surface for single and combined-effect thermal hydraulic studies for LIM and KAERI & KAIST test facilities. The LIES methodology was found to apply successfully to predict the condensing steam flow rate in the all cases of the LIM test case involving a Smooth to Wavy turbulent, concurrent stratified steam-water flow in a 2D channel. The CMFD TransAT code predicting capability is analyzed, comparing the liquid temperature and to much the

  2. Speciation needs in relation with environmental and biological purposes

    International Nuclear Information System (INIS)

    Moulin, V.; Ansoborlo, E.; Bion, L.; Doizi, D.; Moulin, C.; Cote, G.; Madic, C.; Van Der Lee, J.

    2004-01-01

    Radionuclides can occur in the environment either through chronic releases of nuclear facilities, or due to incidents or accidents. In order to study their behaviour in the environment (migration, retention, transfer, and in human organisms (metabolism, retention, excretion), it is of prime importance to know their solution chemistry, and more particularly thermodynamic constants, which will allow to determine their speciation. In fact, speciation governs the migration, the bioavailability and the toxicity of elements. Moreover, this knowledge is also of great interest for decorporation or decontamination purposes. In this framework, a CEA working group on speciation has been created in order to share data both on thermodynamic constants and on speciation analytical methods, interesting chemists, environmentalists and biologists. It has been focused, in a first time, on actinides, namely Th, U, Pu, Am, Np, taking into account their most important oxidation states occurring in environmental or biological environments: Th(IV), U(IV, VI), Pu(III, IV, VI), Am(III), Np(IV, V). A particular attention was devoted to the choice of ligands (inorganic and organic) for being the most representative of environmental and biological media. The thermodynamic database used is BASSIST for Base Applied to Speciation in Solution and at Interfaces and Solubility (developed by CEA), in interaction with the code JCHESS. Different examples will be then presented on the selection of data (thermodynamic constants, ligands of interest) through benchmark exercises (case of U(VI), Am(III), Pu(IV)) which will show the lacks or weakness of knowledge. Speciation diagrams will support these discussions. Moreover, analytical methods to determine thermodynamic constants or direct speciation will also be presented and discussed. (author)

  3. Numerical Recipes in C++: The Art of Scientific Computing (2nd edn). Numerical Recipes Example Book (C++) (2nd edn). Numerical Recipes Multi-Language Code CD ROM with LINUX or UNIX Single-Screen License Revised Version

    International Nuclear Information System (INIS)

    Borcherds, P

    2003-01-01

    The two Numerical Recipes books are marvellous. The principal book, The Art of Scientific Computing, contains program listings for almost every conceivable requirement, and it also contains a well written discussion of the algorithms and the numerical methods involved. The Example Book provides a complete driving program, with helpful notes, for nearly all the routines in the principal book. The first edition of Numerical Recipes: The Art of Scientific Computing was published in 1986 in two versions, one with programs in Fortran, the other with programs in Pascal. There were subsequent versions with programs in BASIC and in C. The second, enlarged edition was published in 1992, again in two versions, one with programs in Fortran (NR(F)), the other with programs in C (NR(C)). In 1996 the authors produced Numerical Recipes in Fortran 90: The Art of Parallel Scientific Computing as a supplement, called Volume 2, with the original (Fortran) version referred to as Volume 1. Numerical Recipes in C++ (NR(C++)) is another version of the 1992 edition. The numerical recipes are also available on a CD ROM: if you want to use any of the recipes, I would strongly advise you to buy the CD ROM. The CD ROM contains the programs in all the languages. When the first edition was published I bought it, and have also bought copies of the other editions as they have appeared. Anyone involved in scientific computing ought to have a copy of at least one version of Numerical Recipes, and there also ought to be copies in every library. If you already have NR(F), should you buy the NR(C++) and, if not, which version should you buy? In the preface to Volume 2 of NR(F), the authors say 'C and C++ programmers have not been far from our minds as we have written this volume, and we think that you will find that time spent in absorbing its principal lessons will be amply repaid in the future as C and C++ eventually develop standard parallel extensions'. In the preface and introduction to NR

  4. Numerical modelling of the long-term evolution of EDZ. Development of material models, implementation in finite-element codes, and validation

    International Nuclear Information System (INIS)

    Pudewills, A.

    2005-11-01

    Construction of deep underground structures disturbs the initial stress field in the surrounding rock. This effect can generate microcracks and alter the hydromechanical properties of the rock salt around the excavations. For the long-term performance of an underground repository in rock salt, the evolution of the 'Excavation Disturbed Zone' (EDZ) and the hydromechanical behaviour of this zone represent important issues with respect to the integrity of the geological and technical barriers. Within the framework of the NF-PRO project, WP 4.4, attention focuses on the mathematical modelling of the development and evolution of the EDZ in the rock near a disposal drift due to its relevance on the integrity of the geological and technical barriers. To perform this task, finite-element codes containing a set of time- and temperature-dependent constitutive models have been improved. A new viscoplastic constitutive model for rock salt that can describe the damage of the rock has been implemented in the finite-element codes available. The model parameters were evaluated based on experimental results. Additionally, the long-term evolution of the EDZ around a gallery in a salt mine at about 700 m below the surface was analysed and the numerical results were compared with in-situ measurements. The calculated room closure, stress distribution and the increase of rock permeability in the EDZ were compared with in-situ data, thus providing confidence in the model used. (orig.)

  5. Study on in-vessel thermohydraulics phenomena of sodium-cooled fast reactors. 4. Numerical analysis of 1/10 scaled water experiment with the AQUA code

    International Nuclear Information System (INIS)

    Muramatu, Toshiharu; Yamaguchi, Akira

    2004-01-01

    A large-scale sodium-cooled fast breeder reactor in the feasibility studies on commercialized fast reactors has a feature of consideration of thorough simplified and compacted systems and components design to realize drastic economical improvements. Therefore, special attentions should be paid to thermohydraulic designs for gas entrainment behavior from free surface, flow-induced vibration of in-vessel components, thermal stratification in the plenum, thermal shock for various structures due to high-speed coolant flows, nonsymmetrical coolant flows, etc. in the reactor vessel. A numerical analysis was carried out with a multi-dimensional code AQUA to confirm an applicability to the evaluations for the in-vessel thermohydraulic phenomena using a 1/10 scaled water experiment simulating the large-scale fast breeder reactor in the feasibility studies. From the analysis, the following results were obtained. (1) In-vessel thermohydraulics characterized by a radiated flow pattern to the reactor vessel wall and a strong upward flow through a slit of the upper core structures were evaluated. These characteristics agreed approximately with the water experiment. (2) The upward velocity values at the slit agreed well with the experimental data under a condition of γ z = 0.3 and ξ z = 0.5, though overall evaluations of the in-vessel thermohydraulics were failed to predict quantitatively. (3) The AQUA code is applicable to the in-vessel thermohydraulics evaluations in the feasibility studies, though it is necessary to make further modifications of the calculational models for accurate evaluations. On the one hand, it was confirmed that calculated results for the 1/10 water experimental model and the 1/1 actual-scaled model agreed quantitatively for the in-vessel thermohydraulics characteristics indicated above. (author)

  6. X exceptionalism in Caenorhabditis speciation.

    Science.gov (United States)

    Cutter, Asher D

    2017-11-13

    Speciation genetics research in diverse organisms shows the X-chromosome to be exceptional in how it contributes to "rules" of speciation. Until recently, however, the nematode phylum has been nearly silent on this issue, despite the model organism Caenorhabditis elegans having touched most other topics in biology. Studies of speciation with Caenorhabditis accelerated with the recent discovery of species pairs showing partial interfertility. The resulting genetic analyses of reproductive isolation in nematodes demonstrate key roles for the X-chromosome in hybrid male sterility and inviability, opening up new understanding of the genetic causes of Haldane's rule, Darwin's corollary to Haldane's rule, and enabling tests of the large-X effect hypothesis. Studies to date implicate improper chromatin regulation of the X-chromosome by small RNA pathways as integral to hybrid male dysfunction. Sexual transitions in reproductive mode to self-fertilizing hermaphroditism inject distinctive molecular evolutionary features into the speciation process for some species. Caenorhabditis also provides unique opportunities for analysis in a system with XO sex determination that lacks a Y-chromosome, sex chromosome-dependent sperm competition differences and mechanisms of gametic isolation, exceptional accessibility to the development process and rapid experimental evolution. As genetic analysis of reproductive isolation matures with investigation of multiple pairs of Caenorhabditis species and new species discovery, nematodes will provide a powerful complement to more established study organisms for deciphering the genetic basis of and rules to speciation. © 2017 John Wiley & Sons Ltd.

  7. CHURCH, Category, and Speciation

    Directory of Open Access Journals (Sweden)

    Rinderknecht Jakob Karl

    2018-01-01

    Full Text Available The Roman Catholic definition of “church”, especially as applied to groups of Protestant Christians, creates a number of well-known difficulties. The similarly complex category, “species,” provides a model for applying this term so as to neither lose the centrality of certain examples nor draw a hard boundary to rule out border cases. In this way, it can help us to more adequately apply the complex ecclesiology of the Second Vatican Council. This article draws parallels between the understanding of speciation and categorization and the definition of Church since the council. In doing so, it applies the work of cognitive linguists, including George Lakoff, Zoltan Kovecses, Giles Fauconnier and Mark Turner on categorization. We tend to think of categories as containers into which we sort objects according to essential criteria. However, categories are actually built inductively by making associations between objects. This means that natural categories, including species, are more porous than we assume, but nevertheless bear real meaning about the natural world. Taxonomists dispute the border between “zebras” and “wild asses,” but this distinction arises out of genetic and evolutionary reality; it is not merely arbitrary. Genetic descriptions of species has also led recently to the conviction that there are four species of giraffe, not one. This engagement will ground a vantage point from which the Council‘s complex ecclesiology can be more easily described so as to authentically integrate its noncompetitive vision vis-a-vis other Christians with its sense of the unique place held by Catholic Church.

  8. Cancer: beyond speciation.

    Science.gov (United States)

    Vincent, Mark D

    2011-01-01

    A good account of the nature of cancer should provide not only a description of its consistent features, but also how they arise, how they are maintained, why conventional chemotherapy succeeds, and fails, and where to look for better targets. Cancer was once regarded as enigmatic and inexplicable; more recently, the "mutation theory," based on random alterations in a relatively small set of proto-oncogenes and tumor suppressor genes, has enjoyed widespread acceptance. The "mutation theory," however, is noticeable for its failure to explain the basis of differential chemosensitivity, for providing a paucity of targets, especially druggable ones, and for justifying the development of targeted therapies with, in general, disappointingly abbreviated clinical benefit. Furthermore, this theory has mistakenly predicted a widespread commonality of consistent genetic abnormalities across the range of cancers, whereas the opposite, that is, roiling macrogenomic instability, is generally the rule. In contrast, concerning what actually is consistent, that is, the suite of metabolic derangements common to virtually all, especially aggressive, cancers, the "Mutation Theory" has nothing to say. Other hypotheses merit serious consideration "aneuploidy theories" posit whole-genome instability and imbalance as causally responsible for the propagation of the tumor. Another approach, that is, "derepression atavism," suggests cancer results from the release of an ancient survival program, characterized by the emergence of remarkably primitive features such as unicellularity, fermentation, and immortality; existential goals are served by heuristic genomic instability coupled with host-to-tumor biomass interconversion, mediated by the Warburg effect, a major component of the program. Carcinogenesis is here seen as a process of de-speciation; however, genomic nonrestabilization raises issues as to where on the tree of life cancers belong, as a genuinely alternative modus vivendi

  9. Numerical modelling of the processes in the WWER-1000 containment building during cold leg LOCA using the CONTEMPT-LT/026 code

    International Nuclear Information System (INIS)

    Kolev, N.I.; Sybotinov, L.S.

    1984-01-01

    The CONTEMPT-LT/026 code has been used to produce numerical results for the processes in a WWER-1000 containment building during cold leg LOCA with break at the reactor vessel. The objective of the analysis is to estimate the maximal loads on the containment in case of LOCA. Available design data for the geometry and for the operational characteristics of the low-pressure ECC system and the sprinkler system have been used. Boundary conditions such as mass flow and enthalpies at the breach are given by a RELAP4/MOD6 computation. Hydrogen explosions in the containment are not considered. It is found that in case of normal functioning of the low-pressure ECC system the maximal pressure is 3,26±0,44 bar. In the case of malfunctioning of the low-pressure ECC system, the predicted maximal pressure is 4±0,44 bar, when: a) only 50% of the heat transfer surface of the heat exchanger is effectively used due to pollution; b) the main pipeline of the sprinkler is broken; c) the pipeline to the heat exchanger is partially broken so that the mass flow through the exchanger is only 50% of the nominal; and d) ECC low-pressure ECC system attains its maximal efficiency within 3 min, the predicted maximal pressure is 4±0,44 bar

  10. Separate mechanisms for magnitude and order processing in the spatial-numerical association of response codes (SNARC) effect: The strange case of musical note values.

    Science.gov (United States)

    Prpic, Valter; Fumarola, Antonia; De Tommaso, Matteo; Luccio, Riccardo; Murgia, Mauro; Agostini, Tiziano

    2016-08-01

    The spatial-numerical association of response codes (SNARC) effect is considered an evidence of the association between numbers and space, with faster left key-press responses to small numbers and faster right key-press responses to large numbers. We examined whether visually presented note values produce a SNARC-like effect. Differently from numbers, note values are represented as a decreasing left-to-right progression, allowing us to disambiguate the contribution of order and magnitude in determining the direction of the effect. Musicians with formal education performed a note value comparison in Experiment 1 (direct task), a line orientation judgment in Experiment 2 (indirect task), and a detection task in Experiment 3 (indirect task). When note values were task relevant (direct task), participants responded faster to large note values with the left key-press, and vice versa. Conversely, when note values were task irrelevant (indirect tasks), the direction of this association was reversed. This evidence suggests the existence of separate mechanisms underlying the SNARC effect. Namely, an Order-Related Mechanism (ORM) and a Magnitude-Related Mechanism (MRM) that are revealed by different task demands. Indeed, according to a new model we proposed, ordinal and magnitude related information appears to be preferentially involved in direct and indirect tasks, respectively. (PsycINFO Database Record (c) 2016 APA, all rights reserved).

  11. Numerical study of effects of the beam tube on laser fields with a three-dimensional simulation code using the finite element method

    CERN Document Server

    Sobajima, M; Yamazaki, T; Yoshikawa, K; Ohnishi, M; Toku, H; Masuda, K; Kitagaki, J; Nakamura, T

    1999-01-01

    In January 1997, the Beijing FEL observed large laser amplification at 8-18 mu m. However, through the collaborative work, it was found from both experiments and numerical simulations that the laser loss on the beam tube wall was not negligible, and that the saturation was not seen in the relatively long wavelength range because of this loss. This calls for further investigation on the effects of the beam tube of finite size. In order to include such effects self-consistently, we have developed a new three-dimensional code that can solve equations with the boundary conditions of the beam tube by using the Finite Element Method. Results show that the beam tube effects are dominant in deriving higher laser modes in the tube, compared with the optical guiding effects, and consequently reduced gain especially in the longer wavelength range, where the beam tube effects are greatly emphasized. It is also found that TEM sub 0 sub 2 mode is the most dominant higher mode in the beam tube, and is also the main cause of...

  12. Complementary arsenic speciation methods: A review

    Energy Technology Data Exchange (ETDEWEB)

    Nearing, Michelle M., E-mail: michelle.nearing@rmc.ca; Koch, Iris, E-mail: koch-i@rmc.ca; Reimer, Kenneth J., E-mail: reimer-k@rmc.ca

    2014-09-01

    The toxicity of arsenic greatly depends on its chemical form and oxidation state (speciation) and therefore accurate determination of arsenic speciation is a crucial step in understanding its chemistry and potential risk. High performance liquid chromatography with inductively coupled mass spectrometry (HPLC–ICP-MS) is the most common analysis used for arsenic speciation but it has two major limitations: it relies on an extraction step (usually from a solid sample) that can be incomplete or alter the arsenic compounds; and it provides no structural information, relying on matching sample peaks to standard peaks. The use of additional analytical methods in a complementary manner introduces the ability to address these disadvantages. The use of X-ray absorption spectroscopy (XAS) with HPLC–ICP-MS can be used to identify compounds not extracted for HPLC–ICP-MS and provide minimal processing steps for solid state analysis that may help preserve labile compounds such as those containing arsenic-sulfur bonds, which can degrade under chromatographic conditions. On the other hand, HPLC–ICP-MS is essential in confirming organoarsenic compounds with similar white line energies seen by using XAS, and identifying trace arsenic compounds that are too low to be detected by XAS. The complementary use of electrospray mass spectrometry (ESI–MS) with HPLC–ICP-MS provides confirmation of arsenic compounds identified during the HPLC–ICP-MS analysis, identification of unknown compounds observed during the HPLC–ICP-MS analysis and further resolves HPLC–ICP-MS by identifying co-eluting compounds. In the complementary use of HPLC–ICP-MS and ESI–MS, HPLC–ICP-MS helps to focus the ESI–MS selection of ions. Numerous studies have shown that the information obtained from HPLC–ICP-MS analysis can be greatly enhanced by complementary approaches. - Highlights: • HPLC–ICP-MS is the most common method used for arsenic speciation. • HPLC limitations include

  13. Complementary arsenic speciation methods: A review

    International Nuclear Information System (INIS)

    Nearing, Michelle M.; Koch, Iris; Reimer, Kenneth J.

    2014-01-01

    The toxicity of arsenic greatly depends on its chemical form and oxidation state (speciation) and therefore accurate determination of arsenic speciation is a crucial step in understanding its chemistry and potential risk. High performance liquid chromatography with inductively coupled mass spectrometry (HPLC–ICP-MS) is the most common analysis used for arsenic speciation but it has two major limitations: it relies on an extraction step (usually from a solid sample) that can be incomplete or alter the arsenic compounds; and it provides no structural information, relying on matching sample peaks to standard peaks. The use of additional analytical methods in a complementary manner introduces the ability to address these disadvantages. The use of X-ray absorption spectroscopy (XAS) with HPLC–ICP-MS can be used to identify compounds not extracted for HPLC–ICP-MS and provide minimal processing steps for solid state analysis that may help preserve labile compounds such as those containing arsenic-sulfur bonds, which can degrade under chromatographic conditions. On the other hand, HPLC–ICP-MS is essential in confirming organoarsenic compounds with similar white line energies seen by using XAS, and identifying trace arsenic compounds that are too low to be detected by XAS. The complementary use of electrospray mass spectrometry (ESI–MS) with HPLC–ICP-MS provides confirmation of arsenic compounds identified during the HPLC–ICP-MS analysis, identification of unknown compounds observed during the HPLC–ICP-MS analysis and further resolves HPLC–ICP-MS by identifying co-eluting compounds. In the complementary use of HPLC–ICP-MS and ESI–MS, HPLC–ICP-MS helps to focus the ESI–MS selection of ions. Numerous studies have shown that the information obtained from HPLC–ICP-MS analysis can be greatly enhanced by complementary approaches. - Highlights: • HPLC–ICP-MS is the most common method used for arsenic speciation. • HPLC limitations include

  14. Numerical Modeling and Investigation of Fluid-Driven Fracture Propagation in Reservoirs Based on a Modified Fluid-Mechanically Coupled Model in Two-Dimensional Particle Flow Code

    Directory of Open Access Journals (Sweden)

    Jian Zhou

    2016-09-01

    Full Text Available Hydraulic fracturing is a useful tool for enhancing rock mass permeability for shale gas development, enhanced geothermal systems, and geological carbon sequestration by the high-pressure injection of a fracturing fluid into tight reservoir rocks. Although significant advances have been made in hydraulic fracturing theory, experiments, and numerical modeling, when it comes to the complexity of geological conditions knowledge is still limited. Mechanisms of fluid injection-induced fracture initiation and propagation should be better understood to take full advantage of hydraulic fracturing. This paper presents the development and application of discrete particle modeling based on two-dimensional particle flow code (PFC2D. Firstly, it is shown that the modeled value of the breakdown pressure for the hydraulic fracturing process is approximately equal to analytically calculated values under varied in situ stress conditions. Furthermore, a series of simulations for hydraulic fracturing in competent rock was performed to examine the influence of the in situ stress ratio, fluid injection rate, and fluid viscosity on the borehole pressure history, the geometry of hydraulic fractures, and the pore-pressure field, respectively. It was found that the hydraulic fractures in an isotropic medium always propagate parallel to the orientation of the maximum principal stress. When a high fluid injection rate is used, higher breakdown pressure is needed for fracture propagation and complex geometries of fractures can develop. When a low viscosity fluid is used, fluid can more easily penetrate from the borehole into the surrounding rock, which causes a reduction of the effective stress and leads to a lower breakdown pressure. Moreover, the geometry of the fractures is not particularly sensitive to the fluid viscosity in the approximate isotropic model.

  15. Numerical prediction of pressure loss in tight-lattice rod bundle by use of 3-dimensional two-fluid model simulation code ACE-3D

    International Nuclear Information System (INIS)

    Yoshida, Hiroyuki; Takase, Kazuyuki; Suzuki, Takayuki

    2009-01-01

    Two-fluid model can simulate two-phase flow by computational cost less than detailed two-phase flow simulation method such as interface tracking method or particle interaction method. Therefore, two-fluid model is useful for thermal hydraulic analysis in large-scale domain such as a rod bundle. Japan Atomic Energy Agency (JAEA) develops three dimensional two-fluid model analysis code ACE-3D that adopts boundary fitted coordinate system in order to simulate complex shape flow channel. In this paper, boiling two-phase flow analysis in a tight-lattice rod bundle was performed by the ACE-3D. In the results, the void fraction, which distributes in outermost region of rod bundle, is lower than that in center region of rod bundle. The tendency of void fraction distribution agreed with the measurement results by neutron radiography qualitatively. To evaluate effects of two-phase flow model used in the ACE-3D, numerical simulation of boiling two-phase in tight-lattice rod bundle with no lift force model was also performed. In the results, the lift force model has direct effects on void fraction concentration in gap region, and pressure distribution in horizontal plane induced by void fraction distribution cause of bubble movement from the gap region to the subchannel region. The predicted pressure loss in the section that includes no spacer accorded with experimental results with around 10% of differences. The predicted friction pressure loss was underestimated around 20% of measured values, and the effect of the turbulence model is considered as one of the causes of this underestimation. (author)

  16. Neutral Models with Generalised Speciation

    NARCIS (Netherlands)

    Haegeman, Bart; Etienne, Rampal S.

    Hubbell's neutral theory claims that ecological patterns such as species abundance distributions can be explained by a stochastic model based on simple assumptions. One of these assumptions, the point mutation assumption, states that every individual has the same probability to speciate. Etienne et

  17. Empirical validation of the triple-code model of numerical processing for complex math operations using functional MRI and group Independent Component Analysis of the mental addition and subtraction of fractions.

    Science.gov (United States)

    Schmithorst, Vincent J; Brown, Rhonda Douglas

    2004-07-01

    The suitability of a previously hypothesized triple-code model of numerical processing, involving analog magnitude, auditory verbal, and visual Arabic codes of representation, was investigated for the complex mathematical task of the mental addition and subtraction of fractions. Functional magnetic resonance imaging (fMRI) data from 15 normal adult subjects were processed using exploratory group Independent Component Analysis (ICA). Separate task-related components were found with activation in bilateral inferior parietal, left perisylvian, and ventral occipitotemporal areas. These results support the hypothesized triple-code model corresponding to the activated regions found in the individual components and indicate that the triple-code model may be a suitable framework for analyzing the neuropsychological bases of the performance of complex mathematical tasks. Copyright 2004 Elsevier Inc.

  18. Genomic islands of divergence are not affected by geography of speciation in sunflowers.

    Science.gov (United States)

    Renaut, S; Grassa, C J; Yeaman, S; Moyers, B T; Lai, Z; Kane, N C; Bowers, J E; Burke, J M; Rieseberg, L H

    2013-01-01

    Genomic studies of speciation often report the presence of highly differentiated genomic regions interspersed within a milieu of weakly diverged loci. The formation of these speciation islands is generally attributed to reduced inter-population gene flow near loci under divergent selection, but few studies have critically evaluated this hypothesis. Here, we report on transcriptome scans among four recently diverged pairs of sunflower (Helianthus) species that vary in the geographical context of speciation. We find that genetic divergence is lower in sympatric and parapatric comparisons, consistent with a role for gene flow in eroding neutral differences. However, genomic islands of divergence are numerous and small in all comparisons, and contrary to expectations, island number and size are not significantly affected by levels of interspecific gene flow. Rather, island formation is strongly associated with reduced recombination rates. Overall, our results indicate that the functional architecture of genomes plays a larger role in shaping genomic divergence than does the geography of speciation.

  19. Aspects of speciation in foodstuffs

    International Nuclear Information System (INIS)

    Crews, Helen M.

    2001-01-01

    Food is the primary source of trace elements for humans and it is now generally accepted that the bioavailability of a given element and its behaviour in the body depends upon its chemical form. This point was illustrated with the example of arsenic speciation in fish in which bioaccumulation takes place in the marine food chain, however, the species of arsenic ingested by man when the fish is consumed are not toxic. It was pointed out that species information will be vital in deciding upon realistic average dietary requirements for trace elements, particularly because both deficiency or excess of an element can have detrimental consequences on an individual's health. Two examples of speciation studies with food (Cd and Se) were presented and the importance of the use of label technology which will allow studies of target analytes at physiological levels, was stressed

  20. MODELING MONOMETHYLMERCURY AND TRIBUTYLTIN SPECIATION WITH EPA'S GEOCHEMICAL SPECIATION MODEL MINTEQA2

    Science.gov (United States)

    Given the complexity of the various, simultaneous (and competing) equilibrium reactions governing the speciation of ionic species in aquatic systems, EPA has developed and distributed the geochemical speciation model MINTEQA2 (Brown and Allison, 1987, Allison et al., 1991; Hydrog...

  1. Study of atmospheric stratification influence on pollutants dispersion using a numerical fluid mechanics model. Code-Saturne validation with the Prairie Grass experiment/Study of atmospheric stratification influence on pollutants dispersion using a numerical fluid mechanics software

    International Nuclear Information System (INIS)

    Coulon, Fanny

    2010-09-01

    A validation of Code-Saturne, a computational fluids dynamics model developed by EDF, is proposed for stable conditions. The goal is to guarantee the performance of the model in order to use it for impacts study. A comparison with the Prairie Grass data field experiment and with two Gaussian plume models will be done [fr

  2. Uranium speciation in Fernald soils

    International Nuclear Information System (INIS)

    Morris, D.E.; Conradson, S.D.; Tait, C.D.; Chisholm-Brause, C.J.; Berg, J.; Musgrave, J.

    1992-01-01

    This report details progress made from January 1 to May 31, 1992 in this analytical support task to determine the speciation of uranium in contaminated soil samples from the Fernald Environmental Management Project site under the auspices of the Uranium in Soils Integrated Demonstration funded through the US DOE's Office of Technology Development. The authors' efforts have focused on characterization of soil samples collected by S.Y. Lee (Oak Ridge National Laboratory) from five locales at the Fernald site. These were chosen to sample a broad range of uranium source terms. On the basis of x-ray absorption spectroscopy data, they have determined that the majority of uranium (> 80--90%) exists in the hexavalent oxidation state for all samples examined. This is a beneficial finding from the perspective of remediation, because U(VI) species are more soluble in general than uranium species in other oxidation states. Optical luminescence data from many of the samples show the characteristic structured yellow-green emission from the uranyl (UO 2 2+ ) moiety. The luminescence data also suggest that much of the uranium in these soils is present as well-crystallized UO 2 2+ species. Some clear spectroscopic distinctions have been noted for several samples that illustrate significant differences in the speciation (1) from site to site, (2) within different horizons at the same site, and (3) within different size fractions of the soils in the same horizon at the same site. This marked heterogeneity in uranyl speciation suggests that several soil washing strategies may be necessary to reduce the total uranium concentrations within these soils to regulatory limits

  3. Speciation of Pb in industrially polluted soils

    DEFF Research Database (Denmark)

    Jensen, Pernille Erland; Ottosen, Lisbeth M.; Pedersen, Anne Juul

    2006-01-01

    This study was aimed at elucidating the importance of original Pb-speciation versus soil-characteristics to mobility and distribution of Pb in industrially polluted soils. Ten industrially polluted Danish surface soils were characterized and Pb speciation was evaluated through SEM-EDX studies...

  4. How common is ecological speciation in plant-feeding insects? A 'Higher' Nematinae perspective

    Directory of Open Access Journals (Sweden)

    Nyman Tommi

    2010-09-01

    Full Text Available Abstract Background Ecological speciation is a process in which a transiently resource-polymorphic species divides into two specialized sister lineages as a result of divergent selection pressures caused by the use of multiple niches or environments. Ecology-based speciation has been studied intensively in plant-feeding insects, in which both sympatric and allopatric shifts onto novel host plants could speed up diversification. However, while numerous examples of species pairs likely to have originated by resource shifts have been found, the overall importance of ecological speciation in relation to other, non-ecological speciation modes remains unknown. Here, we apply phylogenetic information on sawflies belonging to the 'Higher' Nematinae (Hymenoptera: Tenthredinidae to infer the frequency of niche shifts in relation to speciation events. Results Phylogenetic trees reconstructed on the basis of DNA sequence data show that the diversification of higher nematines has involved frequent shifts in larval feeding habits and in the use of plant taxa. However, the inferred number of resource shifts is considerably lower than the number of past speciation events, indicating that the majority of divergences have occurred by non-ecological allopatric speciation; based on a time-corrected analysis of sister species, we estimate that a maximum of c. 20% of lineage splits have been triggered by a change in resource use. In addition, we find that postspeciational changes in geographic distributions have led to broad sympatry in many species having identical host-plant ranges. Conclusion Our analysis indicates that the importance of niche shifts for the diversification of herbivorous insects is at present implicitly and explicitly overestimated. In the case of the Higher Nematinae, employing a time correction for sister-species comparisons lowered the proportion of apparent ecology-based speciation events from c. 50-60% to around 20%, but such corrections are

  5. Advances in Ecological Speciation: an integrative approach.

    Science.gov (United States)

    Faria, Rui; Renaut, Sebastien; Galindo, Juan; Pinho, Catarina; Melo-Ferreira, José; Melo, Martim; Jones, Felicity; Salzburger, Walter; Schluter, Dolph; Butlin, Roger

    2014-02-01

    The role of natural selection in promoting reproductive isolation has received substantial renewed interest within the last two decades. As a consequence, the study of ecological speciation has become an extremely productive research area in modern evolutionary biology. Recent innovations in sequencing technologies offer an unprecedented opportunity to study the mechanisms involved in ecological speciation. Genome scans provide significant insights but have some important limitations; efforts are needed to integrate them with other approaches to make full use of the sequencing data deluge. An international conference 'Advances in Ecological Speciation' organized by the University of Porto (Portugal) aimed to review current progress in ecological speciation. Using some of the examples presented at the conference, we highlight the benefits of integrating ecological and genomic data and discuss different mechanisms of parallel evolution. Finally, future avenues of research are suggested to advance our knowledge concerning the role of natural selection in the establishment of reproductive isolation during ecological speciation. © 2013 John Wiley & Sons Ltd.

  6. Effects of pH on the speciation of radionuclides in groundwater of beishan area, gansu province, China

    International Nuclear Information System (INIS)

    Zhanshi, Zhang; Wenbin, Zhou; Xianhua, Fan

    2002-01-01

    Speciation of radioactive nuclides is one of the most important factors in the study of migration and precipitation of the nuclides related to deep geological disposal of high level radwastes (HLW). Theoretical speciation analysis with thermodynamic equilibrium codes is an effective method. The authors have employed the EQ3NR, a computer program for geochemical aqueous speciation-solubility calculation, to evaluate the speciation of the key nuclides in the groundwater of Beishan Area, a potential area for hosting the HLW Repository of China. The calculated results showed that pH value as well as chemical composition of the water had a great impact on the speciation of key nuclides, such as Np, Pu, Am, U and Th, which would be released from HLW to the groundwater of Beishan Area. In addition, it was found that the speciation of nuclides varied from one to another. However, under alkaline conditions, the speciations were relatively simpler and hydroxyl complexes and carbonate complexes were dominant. (author)

  7. Speciation analysis of radionuclides in the environment. NKS-B speciation project report 2007

    Energy Technology Data Exchange (ETDEWEB)

    Xiaolin Hou (Technical Univ. of Denmark, Risoe National Lab. for Sustainable Energy, Roskilde (Denmark)); Aldahan, A. (Uppsala Univ., Dept. of Earth Science, Uppsala (Sweden)); Possnert, G. (Uppsala Univ., Tandem Lab., Uppsala (Sweden)); Lujaniene, G. (Institute of Physics, Vilnius (Lithuania)); Lehto, J. (Univ. of Helsinki, Dept. of Chemistry, Helsinki (Finland)); Salbu, B. (Norwegian Univ. of Life Sciences (UMB), AAs (Norway))

    2008-07-15

    This report describes the work carried out under the NUK-B project SPECIATION 2007. In 2007, the project partners had two meeting in April and November, organized a NUK seminar on speciation and hot particles. SPECIATION 2007 t mainly focused on two issues on speciation (1) further development of speciation methods for radionuclides, and (2) investigation of speciation of radionuclides in environment. The report summarized the work done in partners labs, which includes: (1) Further development on the speciation of 129I and 127I in water samples; (2) Speciation method for 129I and 127I in air; (3) Dynamic system for fractionation of Pu and Am in soil and sediment; (4) Investigation on Re-absorption of Pu during the fractionation of Pu in soil and sediment; (5) Speciation of 129I in North Sea surface water; (6) Partition of 137Cs and 129I in the Nordic lake sediment, pore-water and lake water; (7) Sequential extraction of Pu in soil, sediment and concrete samples, (8) Pu sorption to Mn and Fe oxides in the geological materials, (10) Investigation of the adsorbed species of lanthanides and actinides on clays surfaces. In addition, two review articles on the speciation of plutonium and iodine in environmental are planned to be submitted to an international journal for publication. (au)

  8. Speciation analysis of radionuclides in the environment. NKS-B speciation project report 2007

    International Nuclear Information System (INIS)

    Hou, Xiaolin; Aldahan, A.; Possnert, G.; Lujaniene, G.; Lehto, J.; Salbu, B.

    2008-07-01

    This report describes the work carried out under the NUK-B project SPECIATION 2007. In 2007, the project partners had two meeting in April and November, organized a NUK seminar on speciation and hot particles. SPECIATION 2007 t mainly focused on two issues on speciation (1) further development of speciation methods for radionuclides, and (2) investigation of speciation of radionuclides in environment. The report summarized the work done in partners labs, which includes: (1) Further development on the speciation of 129I and 127I in water samples; (2) Speciation method for 129I and 127I in air; (3) Dynamic system for fractionation of Pu and Am in soil and sediment; (4) Investigation on Re-absorption of Pu during the fractionation of Pu in soil and sediment; (5) Speciation of 129I in North Sea surface water; (6) Partition of 137Cs and 129I in the Nordic lake sediment, pore-water and lake water; (7) Sequential extraction of Pu in soil, sediment and concrete samples, (8) Pu sorption to Mn and Fe oxides in the geological materials, (10) Investigation of the adsorbed species of lanthanides and actinides on clays surfaces. In addition, two review articles on the speciation of plutonium and iodine in environmental are planned to be submitted to an international journal for publication. (au)

  9. US EPA's SPECIATE 4.4 Database: Development and Uses

    Science.gov (United States)

    SPECIATE is the U.S. Environmental Protection Agency’s (EPA) repository of volatile organic gas and particulate matter (PM) speciation profiles of air pollution sources. EPA released SPECIATE 4.4 in early 2014 and, in total, the SPECIATE 4.4 database includes 5,728 PM, volatile o...

  10. Development of a numerical code for the analysis of the linear stability of the U1 and U2 reactors of the CNLV

    International Nuclear Information System (INIS)

    Espinosa P, G.; Estrada P, C.E.; Nunez C, A.; Amador G, R.

    2001-01-01

    The computer code ANESLI-1 developed by the CNSNS and UAM-I, has the main goal of making stability analysis of nuclear reactors of the BWR type, more specifically, the reactors of the U1 and U2 of the CNLV. However it can be used for another kind of applications. Its capacity of real time simulator, allows the prediction of operational transients, and conditions of dynamic steady states. ANESLI-1 was developed under a modular scheme, which allows to extend or/and to improve its scope. The lineal stability analysis predicts the instabilities produced by the wave density phenomenon. (Author)

  11. Speciation Analysis of Radionuclides in the Environment - NSK-B SPECIATION project report 2009

    DEFF Research Database (Denmark)

    Hou, Xiaolin; Aldahan, Ala; Possnert, Göran

    . Speciation of radionuclides in soils and sediments includes: Sequential extraction of radionuclides in sediments and of trace elements in soil samples. Sequential extraction of radionuclides in aerosols and particles has also been performed. Further-more, sorption experiments have been performed......, sediments, particles); and (3) Intercomparison excise for speciation analysis of radionu-clides in soil and sediment. This report summarizes the work completed in the project partners’ laboratories, Method developments include: Development of an rapid and in-suit separation method for the speciation...... analysis of 129I in seawater samples; Development of a simple method for the speciation analysis of 129I in fresh water and seawater samples; Development of an on-line HPLC-ICP-MS method for the direct speciation analysis of 127I in water and leachate samples; Speciation of radionuclides in water includes...

  12. Numerical Tests for the Problem of U-Pu Fuel Burnup in Fuel Rod and Polycell Models Using the MCNP Code

    Science.gov (United States)

    Muratov, V. G.; Lopatkin, A. V.

    An important aspect in the verification of the engineering techniques used in the safety analysis of MOX-fuelled reactors, is the preparation of test calculations to determine nuclide composition variations under irradiation and analysis of burnup problem errors resulting from various factors, such as, for instance, the effect of nuclear data uncertainties on nuclide concentration calculations. So far, no universally recognized tests have been devised. A calculation technique has been developed for solving the problem using the up-to-date calculation tools and the latest versions of nuclear libraries. Initially, in 1997, a code was drawn up in an effort under ISTC Project No. 116 to calculate the burnup in one VVER-1000 fuel rod, using the MCNP Code. Later on, the authors developed a computation technique which allows calculating fuel burnup in models of a fuel rod, or a fuel assembly, or the whole reactor. It became possible to apply it to fuel burnup in all types of nuclear reactors and subcritical blankets.

  13. Speciation analysis of radionuclides in the environment - NSK-B SPECIATION project report 2009

    International Nuclear Information System (INIS)

    Hou, X.; Aldahan, A.; Possnert, G.; Lujaniene, G.; Lehto, J.; Skipperud, L.; Lind, O.C.; Salbu, B.

    2009-10-01

    The second stage of the NKS-B project SPECIATION was complemented in 2008-2009, which mainly focus on three aspects: (1) Further improvement and development of methods for speciation analysis of radionuclides; (2) Investigation of speciation of some radionuclides in the environment (water, sediments, particles); and (3) Intercomparison excise for speciation analysis of radionuclides in soil and sediment. This report summarizes the work completed in the project partners' laboratories. Method developments include: Development of an rapid and in-suit separation method for the speciation analysis of 129I in seawater samples; Development of a simple method for the speciation analysis of 129I in fresh water and seawater samples; Development of an on-line HPLC-ICP-MS method for the direct speciation analysis of 127I in water and leachate samples; Speciation of radionuclides in water includes: Speciation of 129I and 127I in time-series precipitation samples collected in Denmark 2001-2006 and its application for the investigation of geochemistry and atmospheric chemistry of iodine, Speciation of radionuclides in Ob and Yenisey Rivers, and Speciation of 129I and 127I in Lake Heimdalen water. Speciation of radionuclides in soils and sediments includes: Sequential extraction of radionuclides in sediments and of trace elements in soil samples. Sequential extraction of radionuclides in aerosols and particles has also been performed. Furthermore, sorption experiments have been performed to investigate the association of Pu, Am and Cs with different geological materials. The intercomparison exercises included sequential extraction of Pu, 137Cs, U, Th, and 129I in one soil and one sediment standard reference materials (NIST-4354, IAEA-375) and Pu in sediment collected from the Lake Heimdalen, Norway. (author)

  14. Speciation analysis of radionuclides in the environment - NSK-B SPECIATION project report 2009

    Energy Technology Data Exchange (ETDEWEB)

    Hou, X. (Technical Univ. of Denmark, Risoe National Lab. for Sustainable Energy, Roskilde (Denmark)); Aldahan, A. (Uppsala Univ., Dept. of Earth Science (Sweden)); Possnert, G. (Uppsala Univ., Tandem Lab. (Sweden)); Lujaniene, G. (Univ. of Helsinki, Lab. of Radiochemistry (Finland)); Lehto, J. (Institute of Physics (Lithuania)); Skipperud, L.; Lind, O.C.; Salbu, B. (Norwegian Univ. of Life Sciences, Isotope Lab., AAs (Norway))

    2009-10-15

    The second stage of the NKS-B project SPECIATION was complemented in 2008-2009, which mainly focus on three aspects: (1) Further improvement and development of methods for speciation analysis of radionuclides; (2) Investigation of speciation of some radionuclides in the environment (water, sediments, particles); and (3) Intercomparison excise for speciation analysis of radionuclides in soil and sediment. This report summarizes the work completed in the project partners' laboratories. Method developments include: Development of an rapid and in-suit separation method for the speciation analysis of 129I in seawater samples; Development of a simple method for the speciation analysis of 129I in fresh water and seawater samples; Development of an on-line HPLC-ICP-MS method for the direct speciation analysis of 127I in water and leachate samples; Speciation of radionuclides in water includes: Speciation of 129I and 127I in time-series precipitation samples collected in Denmark 2001-2006 and its application for the investigation of geochemistry and atmospheric chemistry of iodine, Speciation of radionuclides in Ob and Yenisey Rivers, and Speciation of 129I and 127I in Lake Heimdalen water. Speciation of radionuclides in soils and sediments includes: Sequential extraction of radionuclides in sediments and of trace elements in soil samples. Sequential extraction of radionuclides in aerosols and particles has also been performed. Furthermore, sorption experiments have been performed to investigate the association of Pu, Am and Cs with different geological materials. The intercomparison exercises included sequential extraction of Pu, 137Cs, U, Th, and 129I in one soil and one sediment standard reference materials (NIST-4354, IAEA-375) and Pu in sediment collected from the Lake Heimdalen, Norway. (author)

  15. Numerical investigation of the vortex-induced vibration of an elastically mounted circular cylinder at high Reynolds number (Re = 104 and low mass ratio using the RANS code.

    Directory of Open Access Journals (Sweden)

    Niaz Bahadur Khan

    Full Text Available This study numerically investigates the vortex-induced vibration (VIV of an elastically mounted rigid cylinder by using Reynolds-averaged Navier-Stokes (RANS equations with computational fluid dynamic (CFD tools. CFD analysis is performed for a fixed-cylinder case with Reynolds number (Re = 104 and for a cylinder that is free to oscillate in the transverse direction and possesses a low mass-damping ratio and Re = 104. Previously, similar studies have been performed with 3-dimensional and comparatively expensive turbulent models. In the current study, the capability and accuracy of the RANS model are validated, and the results of this model are compared with those of detached eddy simulation, direct numerical simulation, and large eddy simulation models. All three response branches and the maximum amplitude are well captured. The 2-dimensional case with the RANS shear-stress transport k-w model, which involves minimal computational cost, is reliable and appropriate for analyzing the characteristics of VIV.

  16. Radionuclide speciation in the environment: a review

    International Nuclear Information System (INIS)

    Moulin, V.; Moulin, C.

    2001-01-01

    Speciation determination is of prime importance to explain and evaluate the mobility, the toxicity and the risk resulting from the presence of trace elements in natural systems, in particular in the case of radionuclides, in the framework of environment and waste management purposes. The present paper will then focus more specifically on the physico-chemical speciation of radionuclides, and more particularly of actinides, in the environment, with emphasis on the behavior in solution: from a chemical point of view (with important ligands including colloidal phases) using experimental data and speciation calculations, as well as from a more technical point of view (with analytical methods for in situ speciation determination and thermodynamic data determination). A review of recent papers (mainly from CEA) is presented. (orig.)

  17. Pb speciation results in amended soils

    Data.gov (United States)

    U.S. Environmental Protection Agency — The dataset shows the distribution of Pb phases resulting from various amendments to change Pb speciation. This dataset is associated with the following publication:...

  18. Speciation of radionuclides in the environment

    International Nuclear Information System (INIS)

    Gunten, H.R. von; Benes, P.

    1994-02-01

    Methods for the determination of the speciation of radionuclides in aerosols, in aquatic solutions, in sediments, soils and rocks are reviewed. At present, most of the results about speciation are deduced from model calculations, model experiments, and separation of species (forms) of radionuclides, e.g., by sequential extraction procedures. Methods of direct determination of speciation of radionuclides (e.g. by laser induced spectroscopy) are in general not yet sensitive enough for a measurement of the very low concentrations of radionuclides in the environment. The methodological part of this paper is followed by a review of the very abundant literature about speciation of important radionuclides in the environment, i.e. in the atmosphere, hydrosphere and lithosphere. The review does not include the biosphere. Literature up to spring 1993 is included (with a few more recent additions). (author)

  19. Evolution: sympatric speciation the eusocial way

    DEFF Research Database (Denmark)

    Boomsma, Jacobus Jan; Nash, David Richard

    2014-01-01

    Sympatric speciation normally requires particular conditions of ecological niche differentiation. However, ant social parasites have been suspected to arise sympatrically, because (dis)loyalty to eusocial kin-structures induces disruptive selection for dispersal and inbreeding. A new study docume...

  20. Dearborn GC-MS organic speciation data

    Data.gov (United States)

    U.S. Environmental Protection Agency — Ambient particulate matter organic speciation data from July - August, 2011. This dataset is associated with the following publication: Lynam, M., T. Dvonch, J....

  1. Aerosol Chemical Speciation Monitor (ACSM) Instrument Handbook

    Energy Technology Data Exchange (ETDEWEB)

    Watson, Thomas B. [Brookhaven National Lab. (BNL), Upton, NY (United States)

    2017-08-15

    The Aerodyne Aerosol Chemical Speciation Monitor (ACSM) measures particle mass loading and chemical composition in real time for non-refractory sub-micron aerosol particles. The ACSM is designed for long-term unattended deployment and routine monitoring applications.

  2. Code Cactus; Code Cactus

    Energy Technology Data Exchange (ETDEWEB)

    Fajeau, M; Nguyen, L T; Saunier, J [Commissariat a l' Energie Atomique, Centre d' Etudes Nucleaires de Saclay, 91 - Gif-sur-Yvette (France)

    1966-09-01

    This code handles the following problems: -1) Analysis of thermal experiments on a water loop at high or low pressure; steady state or transient behavior; -2) Analysis of thermal and hydrodynamic behavior of water-cooled and moderated reactors, at either high or low pressure, with boiling permitted; fuel elements are assumed to be flat plates: - Flowrate in parallel channels coupled or not by conduction across plates, with conditions of pressure drops or flowrate, variable or not with respect to time is given; the power can be coupled to reactor kinetics calculation or supplied by the code user. The code, containing a schematic representation of safety rod behavior, is a one dimensional, multi-channel code, and has as its complement (FLID), a one-channel, two-dimensional code. (authors) [French] Ce code permet de traiter les problemes ci-dessous: 1. Depouillement d'essais thermiques sur boucle a eau, haute ou basse pression, en regime permanent ou transitoire; 2. Etudes thermiques et hydrauliques de reacteurs a eau, a plaques, a haute ou basse pression, ebullition permise: - repartition entre canaux paralleles, couples on non par conduction a travers plaques, pour des conditions de debit ou de pertes de charge imposees, variables ou non dans le temps; - la puissance peut etre couplee a la neutronique et une representation schematique des actions de securite est prevue. Ce code (Cactus) a une dimension d'espace et plusieurs canaux, a pour complement Flid qui traite l'etude d'un seul canal a deux dimensions. (auteurs)

  3. Research on the chemical speciation of actinides

    International Nuclear Information System (INIS)

    Jung, Euo Chang; Park, K. K.; Cho, H. R.

    2012-04-01

    A demand for the safe and effective management of spent nuclear fuel and radioactive waste generated from nuclear power plant draws increasing attention with the growth of nuclear power industry. The objective of this project is to establish the basis of research on the actinide chemistry by using highly sensitive and advanced laser-based spectroscopic systems. Researches on the chemical speciation of actinides are prerequisite for the development of technologies related to nuclear fuel cycles, especially, such as the safe management of high level radioactive wastes and the chemical examination of irradiated nuclear fuels. For supporting these technologies, laser-based spectroscopies have been applied for the chemical speciation of actinide in aqueous solutions and the quantitative analysis of actinide isotopes in spent nuclear fuels. In this report, results on the following subjects have been summarized. Development of TRLFS technology for the chemical speciation of actinides, Development of laser-induced photo-acoustic spectroscopy (LPAS) system, Application of LIBD technology to investigate dynamic behaviors of actinides dissolution reactions, Development of nanoparticle analysis technology in groundwater using LIBD, Chemical speciation of plutonium complexes by using a LWCC system, Development of LIBS technology for the quantitative analysis of actinides, Evaluation on the chemical reactions between actinides and humic substances, Spectroscopic speciation of uranium-ligand complexes in aqueous solution, Chemical speciation of actinides adsorbed on metal oxides surfaces

  4. Research on the chemical speciation of actinides

    International Nuclear Information System (INIS)

    Jung, Euo Chang; Park, K. K.; Cho, H. R.

    2010-04-01

    A demand for the safe and effective management of spent nuclear fuel and radioactive waste generated from nuclear power plant draws increasing attention with the growth of nuclear power industry. The objective of this project is to establish the basis of research on the actinide chemistry by using advanced laser-based highly sensitive spectroscopic systems. Researches on the chemical speciation of actinides are prerequisite for the development of technologies related to nuclear fuel cycles, especially, such as the safe management of high level radioactive wastes and the chemical examination of irradiated nuclear fuels. For supporting these technologies, laser-based spectroscopies have been performed for the chemical speciation of actinide in an aqueous solutions and the quantitative analysis of actinide isotopes in spent nuclear fuels. In this report, results on the following subjects have been summarized. (1) Development of TRLFS technology for chemical speciation of actinides, (2) Development of LIBD technology for measuring solubility of actinides, (3) Chemical speciation of plutonium complexes by using a LWCC system, (4) Development of LIBS technology for the quantitative analysis of actinides, (5) Development of technology for the chemical speciation of actinides by CE, (6) Evaluation on the chemical reactions between actinides and humic substances, (7) Chemical speciation of actinides adsorbed on metal oxides surfaces, (8) Determination of actinide source terms of spent nuclear fuel

  5. Long-term landscape evolution of the Poços de Caldas Plateau revealed by thermokinematic numerical modeling using the software code Pecube, SE- Brazil

    Science.gov (United States)

    Doranti Tiritan, Carolina; Hackspacher, Peter C.; Glasmacher, Ulrich A.

    2014-05-01

    The Poços de Caldas Plateau in the southeastern Brazil, and it is characterized by a high relief topography supported by the pre-Cambrian crystalline rocks and by the Poços de Caldas Alkaline Massif (PCAM). Ulbrich et al (2002) determine that the ages for the predominant PCAM intermediate rocks were constrained ~83Ma. In addition, geologic observations indicates the phonolites, tinguaites and nepheline syenites were emplaced in a continuous and rapid sequence lasting between 1 to 2 Ma. The topography is characterized by dissected plateau with irregular topographic ridges and peaks with elevations between 900 and 1300m (a.s.l.) on the metamorphic basement and from 1300 to 1700m (a.s.l) on the PCAM region. Therefore, the aim of the work was quantify the main processes that were responsible for the evolution of the landscape by using methods as the low temperature thermochronology and the 3D thermokinematic modeling, for obtaining data of uplift and erosion rates and to correlate them with the thermal gradients of the region. The 3D thermokinematic modeling was obtained using the software code PECUBE (Braun 2003).

  6. A workflow for handling heterogeneous 3D models with the TOUGH2 family of codes: Applications to numerical modeling of CO 2 geological storage

    Science.gov (United States)

    Audigane, Pascal; Chiaberge, Christophe; Mathurin, Frédéric; Lions, Julie; Picot-Colbeaux, Géraldine

    2011-04-01

    This paper is addressed to the TOUGH2 user community. It presents a new tool for handling simulations run with the TOUGH2 code with specific application to CO 2 geological storage. This tool is composed of separate FORTRAN subroutines (or modules) that can be run independently, using input and output files in ASCII format for TOUGH2. These modules have been developed specifically for modeling of carbon dioxide geological storage and their use with TOUGH2 and the Equation of State module ECO2N, dedicated to CO 2-water-salt mixture systems, with TOUGHREACT, which is an adaptation of TOUGH2 with ECO2N and geochemical fluid-rock interactions, and with TOUGH2 and the EOS7C module dedicated to CO 2-CH 4 gas mixture is described. The objective is to save time for the pre-processing, execution and visualization of complex geometry for geological system representation. The workflow is rapid and user-friendly and future implementation to other TOUGH2 EOS modules for other contexts (e.g. nuclear waste disposal, geothermal production) is straightforward. Three examples are shown for validation: (i) leakage of CO 2 up through an abandoned well; (ii) 3D reactive transport modeling of CO 2 in a sandy aquifer formation in the Sleipner gas Field, (North Sea, Norway); and (iii) an estimation of enhanced gas recovery technology using CO 2 as the injected and stored gas to produce methane in the K12B Gas Field (North Sea, Denmark).

  7. Numeric implementation of a nucleation, growth and transport model for helium bubbles in lead-lithium HCLL breeding blanket channels: Theory and code development

    Energy Technology Data Exchange (ETDEWEB)

    Batet, L., E-mail: lluis.batet@upc.edu [Technical University of Catalonia (UPC), Energy and Radiation Studies Research Group (GREENER), Technology for Fusion T4F, Barcelona (Spain); UPC, Department of Physics and Nuclear Engineering (DFEN), ETSEIB, Av. Diagonal 647, 08028 Barcelona (Spain); Fradera, J. [Technical University of Catalonia (UPC), Energy and Radiation Studies Research Group (GREENER), Technology for Fusion T4F, Barcelona (Spain); UPC, Department of Physics and Nuclear Engineering (DFEN), ETSEIB, Av. Diagonal 647, 08028 Barcelona (Spain); Valls, E. Mas de les [Technical University of Catalonia (UPC), Energy and Radiation Studies Research Group (GREENER), Technology for Fusion T4F, Barcelona (Spain); UPC, Department of Heat Engines (DMMT), ETSEIB, Av. Diagonal 647, 08028 Barcelona (Spain); Sedano, L.A. [EURATOM-CIEMAT Association, Fusion Technology Division, Av. Complutense 22, 28040 Madrid (Spain)

    2011-06-15

    Large helium (He) production rates in liquid metal breeding blankets of a DT fusion reactor might have a significant influence in the system design. Low He solubility together with high local concentrations may create the conditions for He cavitation, which would have an impact in the components performance. The paper states that such a possibility is not remote in a helium cooled lithium-lead breeding blanket design. A model based on the Classical Nucleation Theory (CNT) has been developed and implemented in order to have a specific tool able to simulate HCLL systems and identify the key parameters and sensitivities. The nucleation and growth model has been implemented in the open source CFD code OpenFOAM so that transport of dissolved atomic He and nucleated He bubbles can be simulated. At the current level of development it is assumed that void fraction is small enough not to affect either the hydrodynamics or the properties of the liquid metal; thus, bubbles can be represented by means of a passive scalar. He growth and transport has been implemented using the mean radius approach in order to save computational time. Limitations and capabilities of the model are shown by means of zero-dimensional simulation and sensitivity analysis under HCLL breeding unit conditions.

  8. Genetic evidence for hybrid trait speciation in heliconius butterflies.

    Directory of Open Access Journals (Sweden)

    Camilo Salazar

    2010-04-01

    Full Text Available Homoploid hybrid speciation is the formation of a new hybrid species without change in chromosome number. So far, there has been a lack of direct molecular evidence for hybridization generating novel traits directly involved in animal speciation. Heliconius butterflies exhibit bright aposematic color patterns that also act as cues in assortative mating. Heliconius heurippa has been proposed as a hybrid species, and its color pattern can be recreated by introgression of the H. m. melpomene red band into the genetic background of the yellow banded H. cydno cordula. This hybrid color pattern is also involved in mate choice and leads to reproductive isolation between H. heurippa and its close relatives. Here, we provide molecular evidence for adaptive introgression by sequencing genes across the Heliconius red band locus and comparing them to unlinked wing patterning genes in H. melpomene, H. cydno, and H. heurippa. 670 SNPs distributed among 29 unlinked coding genes (25,847bp showed H. heurippa was related to H. c. cordula or the three species were intermixed. In contrast, among 344 SNPs distributed among 13 genes in the red band region (18,629bp, most showed H. heurippa related with H. c. cordula, but a block of around 6,5kb located in the 3' of a putative kinesin gene grouped H. heurippa with H. m. melpomene, supporting the hybrid introgression hypothesis. Genealogical reconstruction showed that this introgression occurred after divergence of the parental species, perhaps around 0.43Mya. Expression of the kinesin gene is spatially restricted to the distal region of the forewing, suggesting a mechanism for pattern regulation. This gene therefore constitutes the first molecular evidence for adaptive introgression during hybrid speciation and is the first clear candidate for a Heliconius wing patterning locus.

  9. Selfish X chromosomes and speciation.

    Science.gov (United States)

    Patten, Manus M

    2017-12-27

    In two papers published at about the same time almost thirty years ago, Frank (Evolution, 45, 1991a, 262) and Hurst and Pomiankowski (Genetics, 128, 1991, 841) independently suggested that divergence of meiotic drive systems-comprising genes that cheat meiosis and genes that suppress this cheating-might provide a general explanation for Haldane's rule and the large X-effect in interspecific hybrids. Although at the time, the idea was met with skepticism and a conspicuous absence of empirical support, the tide has since turned. Some of the clearest mechanistic explanations we have for hybrid male sterility involve meiotic drive systems, and several other cases of hybrid sterility are suggestive of a role for meiotic drive. In this article, I review these ideas and their descendants and catalog the current evidence for the meiotic drive model of speciation. In addition, I suggest that meiotic drive is not the only intragenomic conflict to involve the X chromosome and contribute to hybrid incompatibility. Sexually and parentally antagonistic selection pressures can also pit the X chromosome and autosomes against each other. The resulting intragenomic conflicts should lead to co-evolution within populations and divergence between them, thus increasing the likelihood of incompatibilities in hybrids. I provide a sketch of these ideas and interpret some empirical patterns in the light of these additional X-autosome conflicts. © 2017 John Wiley & Sons Ltd.

  10. Numerical simulation of cracks and interfaces with cohesive zone models in the extended finite element method, with EDF R and D software Code Aster

    International Nuclear Information System (INIS)

    Ferte, Guilhem

    2014-01-01

    In order to assess the harmfulness of detected defects in some nuclear power plants, EDF Group is led to develop advanced simulation tools. Among the targeted mechanisms are 3D non-planar quasi-static crack propagation, but also dynamic transients during unstable phases. In the present thesis, quasi-brittle crack growth is simulated based on the combination of the XFEM and cohesive zone models. These are inserted over large potential crack surfaces, so that the cohesive law will naturally separate adherent and de-bonding zones, resulting in an implicit update of the crack front, which makes the originality of the approach. This requires a robust insertion of non-smooth interface laws in the XFEM, which is achieved in quasi-statics with the use of XFEM-suited multiplier spaces in a consistent formulation, block-wise diagonal interface operators and an augmented Lagrangian formalism to write the cohesive law. Based on this concept and a novel directional criterion appealing to cohesive integrals, a propagation procedure over non-planar crack paths is proposed and compared with literature benchmarks. As for dynamics, an initially perfectly adherent cohesive law is implicitly treated within an explicit time-stepping scheme, resulting in an analytical determination of interface tractions if appropriate discrete spaces are used. Implementation is validated on a tapered DCB test. Extension to quadratic elements is then investigated. For stress-free cracks, it was found that a subdivision into quadratic sub-cells is needed for optimality. Theory expects enriched quadrature to be necessary for distorted sub-cells, but this could not be observed in practice. For adherent interfaces, a novel discrete multiplier space was proposed which has both numerical stability and produces quadratic convergence if used along with quadratic sub-cells. (author)

  11. Reactor lattice codes

    International Nuclear Information System (INIS)

    Kulikowska, T.

    1999-01-01

    The present lecture has a main goal to show how the transport lattice calculations are realised in a standard computer code. This is illustrated on the example of the WIMSD code, belonging to the most popular tools for reactor calculations. Most of the approaches discussed here can be easily modified to any other lattice code. The description of the code assumes the basic knowledge of reactor lattice, on the level given in the lecture on 'Reactor lattice transport calculations'. For more advanced explanation of the WIMSD code the reader is directed to the detailed descriptions of the code cited in References. The discussion of the methods and models included in the code is followed by the generally used homogenisation procedure and several numerical examples of discrepancies in calculated multiplication factors based on different sources of library data. (author)

  12. How Facilitation May Interfere with Ecological Speciation

    Directory of Open Access Journals (Sweden)

    P. Liancourt

    2012-01-01

    Full Text Available Compared to the vast literature linking competitive interactions and speciation, attempts to understand the role of facilitation for evolutionary diversification remain scarce. Yet, community ecologists now recognize the importance of positive interactions within plant communities. Here, we examine how facilitation may interfere with the mechanisms of ecological speciation. We argue that facilitation is likely to (1 maintain gene flow among incipient species by enabling cooccurrence of adapted and maladapted forms in marginal habitats and (2 increase fitness of introgressed forms and limit reinforcement in secondary contact zones. Alternatively, we present how facilitation may favour colonization of marginal habitats and thus enhance local adaptation and ecological speciation. Therefore, facilitation may impede or pave the way for ecological speciation. Using a simple spatially and genetically explicit modelling framework, we illustrate and propose some first testable ideas about how, when, and where facilitation may act as a cohesive force for ecological speciation. These hypotheses and the modelling framework proposed should stimulate further empirical and theoretical research examining the role of both competitive and positive interactions in the formation of incipient species.

  13. Speciation of zinc in contaminated soils

    International Nuclear Information System (INIS)

    Stephan, Chadi H.; Courchesne, Francois; Hendershot, William H.; McGrath, Steve P.; Chaudri, Amar M.; Sappin-Didier, Valerie; Sauve, Sebastien

    2008-01-01

    The chemical speciation of zinc in soil solutions is critical to the understanding of its bioavailability and potential toxic effects. We studied the speciation of Zn in soil solution extracts from 66 contaminated soils representative of a wide range of field conditions in both North America and Europe. Within this dataset, we evaluated the links among the dissolved concentrations of zinc and the speciation of Zn 2+ , soil solution pH, total soil Zn, dissolved organic matter (DOM), soil organic matter (SOM) and the concentrations of different inorganic anions. The solid-liquid partitioning coefficient (K d ) for Zn ranged from 17 to 13,100 L kg -1 soil. The fraction of dissolved Zn bound to DOM varied from 60% to 98% and the soil solution free Zn 2+ varied from 40% to 60% of the labile Zn. Multiple regression equations to predict free Zn 2+ , dissolved Zn and the solid-liquid partitioning of Zn are given for potential use in environmental fate modeling and risk assessment. The multiple regressions also highlight some of the most important soil properties controlling the solubility and chemical speciation of zinc in contaminated soils. - We studied the relationships among the chemical speciation of Zn in soil solution extracts from 66 contaminated soils and various physicochemical properties of the soils

  14. Speciation by Symbiosis: the Microbiome and Behavior.

    Science.gov (United States)

    Shropshire, J Dylan; Bordenstein, Seth R

    2016-03-31

    Species are fundamental units of comparison in biology. The newly discovered importance and ubiquity of host-associated microorganisms are now stimulating work on the roles that microbes can play in animal speciation. We previously synthesized the literature and advanced concepts of speciation by symbiosis with notable attention to hybrid sterility and lethality. Here, we review recent studies and relevant data on microbes as players in host behavior and behavioral isolation, emphasizing the patterns seen in these analyses and highlighting areas worthy of additional exploration. We conclude that the role of microbial symbionts in behavior and speciation is gaining exciting traction and that the holobiont and hologenome concepts afford an evolving intellectual framework to promote research and intellectual exchange between disciplines such as behavior, microbiology, genetics, symbiosis, and speciation. Given the increasing centrality of microbiology in macroscopic life, microbial symbiosis is arguably the most neglected aspect of animal and plant speciation, and studying it should yield a better understanding of the origin of species. Copyright © 2016 Shropshire and Bordenstein.

  15. Some actinide speciation using laser induced photoacoustic spectroscopy

    International Nuclear Information System (INIS)

    Pollard, P.M.; McMillan, J.W.; Phillips, G.; Thomason, H.P.; Ewart, F.T.

    1988-01-01

    Laser induced photoacoustic spectroscopy is an attractive method for the speciation of actinides in solutions from nuclear disposal studies because it is essentially non-invasive and has a reasonably high sensitivity, down to ca 10 -8 M. A novel true dual beam system has been constructed and commissioned at Harwell with a performance at least equal to any others in existence. It is based on a XeCl excimer laser and a dye laser, beam splitter, two laser power monitors and photoacoustic cells. The wavelength scanning, data collection, and spectra processing and display are controlled by an Apricot computer. The sample and reference cells are housed in an inert atmosphere glove box. Early applications of the equipment described include measurements of Am and Np species under varying conditions of pH, Eh and carbonate concentration. The observations show some correlation with predictions made using the geochemical modelling code PHREEQE. (orig.)

  16. Chemval project report on stage 1: verification of speciation models

    International Nuclear Information System (INIS)

    Read, D.; Broyd, T.W.

    1989-01-01

    CHEMVAL is an international geochemical exercise, which aims at applicating and validating predictive computer programmes describing the chemistry of radionuclides in the geosphere. As a component of the CEC project MIRAGE- second phase (on migration of radionuclides in the geosphere), CHEMVAL is carried out in the framework of the third community R and D programme of radioactive waste management and storage. The present report is the first of a series devoted to the verification and validation of aqueous speciation and coupled chemical transport codes. Five cases systems are studied, namely, cement, clay, sandstore, granite and limestone. Overall, good agreement was obtained. Reasons for divergence in results have been explored and recommendations are made at the appropriate stages for enhancement of the thermodynamic data base. A listing of the preliminary CHEMVAL Project Data Base is provided

  17. Numerical computation of MHD equilibria

    International Nuclear Information System (INIS)

    Atanasiu, C.V.

    1982-10-01

    A numerical code for a two-dimensional MHD equilibrium computation has been carried out. The code solves the Grad-Shafranov equation in its integral form, for both formulations: the free-boundary problem and the fixed boundary one. Examples of the application of the code to tokamak design are given. (author)

  18. Speciation from photon to ion detection

    International Nuclear Information System (INIS)

    Moulin, C.

    2001-01-01

    New analytical techniques allowing to perform speciation in the framework of the nuclear fuel cycle are more and more needed. Among them, several laser-based analytical techniques present several advantages (non intrusive). Hence, Thermal Lensing (TL)/Photoacoustic (LIPAS), Time Resolved selective, sensitive Laser-Induced Fluorescence (TRLIF) have been used for actinides/lanthanides interaction and speciation studies in inorganic and organic matrices, Laser Ablation-Optical Emission Spectroscopy (LA-OES or LIBS) for direct studies on solids, liquids,... where in situ measurements (elemental or isotopic) are mandatory. In complementary to these photon-based methods, new ion detection methods such as ElectroSpray-Mass Spectrometry (ES-MS) seems promising for speciation studies. Principle, advantages and limitations as well as results obtained and trends for these different methods will be presented. (author)

  19. Anaerobic Digestion Alters Copper and Zinc Speciation.

    Science.gov (United States)

    Legros, Samuel; Levard, Clément; Marcato-Romain, Claire-Emmanuelle; Guiresse, Maritxu; Doelsch, Emmanuel

    2017-09-19

    Anaerobic digestion is a widely used organic waste treatment process. However, little is known on how it could alter the speciation of contaminants in organic waste. This study was focused on determining the influence of anaerobic digestion on the speciation of copper and zinc, two metals that generally occur at high concentration in organic waste. Copper and zinc speciation was investigated by X-ray absorption spectroscopy in four different raw organic wastes (predigestion) and their digested counterparts (postdigestion, i.e., digestates). The results highlighted an increase in the digestates of the proportion of amorphous or nanostructured copper sulfides as well as amorphous or nanostructured zinc sulfides and zinc phosphate as compared to raw waste. We therefore suggest that the environmental fate of these elements would be different when spreading either digestates or raw waste on cropland.

  20. Loss of speciation rate will impoverish future diversity

    OpenAIRE

    Rosenzweig, Michael L.

    2001-01-01

    Human activities have greatly reduced the amount of the earth's area available to wild species. As the area they have left declines, so will their rates of speciation. This loss of speciation will occur for two reasons: species with larger geographical ranges speciate faster; and loss of area drives up extinction rates, thus reducing the number of species available for speciation. Theory predicts steady states in species diversity, and fossils suggest that these have t...

  1. The development of chemical speciation analysis

    International Nuclear Information System (INIS)

    Martin, R.; Santana, J.L.; Lima, L.; De La Rosa, D.; Melchor, K.

    2003-01-01

    The knowledge of many metals species on the environmental, its bioaccumulation, quantification and its effect in human body has been studied by a wide researchers groups in the last two decades. The development of speciation analysis has an vertiginous advance close to the developing of novel analytical techniques. Separation and quantification at low level is a problem that's has been afford by a coupling of high resolution chromatographic techniques like HPLC and HRGC with a specific method of detection (ICP-MS or CV-AAS). This methodological approach make possible the success in chemical speciation nowadays

  2. Incidence and Speciation of Candida Species among Non-gravid ...

    African Journals Online (AJOL)

    This study investigated the incidence and speciation of Candida species among non-gravid young females, using commercially available chromogenic Candida speciation media (CHROM agar) for the identification/speciation of medically important yeast and yeastlike organisms in a routine clinical mycology laboratory.

  3. EPAs SPECIATE 4.4 Database: Development and Uses

    Science.gov (United States)

    SPECIATE is the U.S. Environmental Protection Agency’s (EPA) repository of source category-specific particulate matter (PM), volatile organic gas, and other gas speciation profiles of air pollutant emissions. Abt Associates, Inc. developed SPECIATE 4.4 through a collaborat...

  4. Actinide speciation in the environment

    International Nuclear Information System (INIS)

    Choppin, G.R.

    2007-01-01

    Nuclear test explosions and nuclear reactor wastes and accidents have released large amounts of radioactivity into the environment. Actinide ions in waters often are not in a state of thermodynamic equilibrium and their solubility and migration behavior is related to the form in which the nuclides are introduced into the aquatic system. Chemical speciation, oxidation state, redox reactions, and sorption characteristics are necessary in predicting solubility of the different actinides, their migration behaviors and their potential effects on marine biota. The most significant of these variables is the oxidation state of the metal ion as the simultaneous presence of more than one oxidation state for some actinides in a solution complicates actinide environmental behavior. Both Np(V)O 2 + and Pu(V)O 2 + , the most significant soluble states in natural oxic waters, are relatively noncomplexing and resistant to hydrolysis and subsequent precipitation. The solubility of NpO 2 + can be as high as 10 -4 M while that of PuO 2 + is much more limited by reduction to the insoluble tetravalent species, Pu(OH) 4 , (pK sp ≥56) but which can be present in the pentavalent form in aqautic phases as colloidal material. The solubility of hexavalent UO 2 2+ in sea water is relatively high due to formation of carbonate complexes. The insoluble trivalent americium hydroxocarbonate, Am(OH)(CO 3 ) is the limiting species for the solubility of Am(III) in sea water. Thorium(IV) is present as Th(OH) 4 , in colloidal form. The chemistry of actinide ions in the environment is reviewed to show the spectrum of reactions that can occur in natural waters which must be considered in assessing the environmental behavior of actinides. Much is understood about sorption of actinides on surfaces, the mode of migration of actinides in such waters and the potential effects of these radioactive species on marine biota, but much more understanding of the behavior of the actinides in the environment is

  5. Arsenic speciation in solids using X-ray absorption spectroscopy

    Science.gov (United States)

    Foster, Andrea L.; Kim, Chris S.

    2014-01-01

    Synchrotron-based X-ray absorption spectroscopy (XAS) is an in situ, minimally-destructive, element-specific, molecular-scale structural probe that has been employed to study the chemical forms (species) of arsenic (As) in solid and aqueous phases (including rocks, soils, sediment, synthetic compounds, and numerous types of biota including humans) for more than 20 years. Although several excellent reviews of As geochemistry and As speciation in the environment have been published previously (including recent contributions in this volume), the explosion of As-XAS studies over the past decade (especially studies employing microfocused X-ray beams) warrants this new review of the literature and of data analysis methods.

  6. Electrochemical metal speciation in colloidal dispersions

    NARCIS (Netherlands)

    Wonders, J.H.A.M.

    1995-01-01

    The term "heavy metals" is connected with toxicity. They form strong complexes with enzymes, other proteins and DNA in living organisms, which causes dysfunctioning and hence poisoning. In combination with the uptake mechanism of the organism, speciation of heavy metal determines the

  7. ARSENIC SPECIATION ANALYSIS IN HUMAN SALIVA

    Science.gov (United States)

    Background: Determination of arsenic species in human saliva is potentially useful for biomonitoring of human exposure to arsenic and for studying arsenic metabolism. However, there is no report on the speciation analysis of arsenic in saliva. Methods: Arsenic species in saliva ...

  8. Magic cues versus magic preferences in speciation

    NARCIS (Netherlands)

    Maan, Martine E.; Seehausen, Ole

    Question: How does divergent natural selection lead to divergence in mating traits and the evolution of reproductive isolation? Background: Ecological speciation of non-allopatric taxa usually requires the evolution of an association between selective mating and the traits underlying ecological

  9. Biogeochemical speciation of Fe in ocean water

    NARCIS (Netherlands)

    Hiemstra, T.; Riemsdijk, van W.H.

    2006-01-01

    The biogeochemical speciation of Fe in seawater has been evaluated using the consistent Non-Ideal Competitive Adsorption model (NICA¿Donnan model). Two types of data sets were used, i.e. Fe-hydroxide solubility data and competitive ligand equilibration/cathodic stripping voltammetry (CLE/CSV) Fe

  10. Biosensor for metal analysis and speciation

    Science.gov (United States)

    Aiken, Abigail M.; Peyton, Brent M.; Apel, William A.; Petersen, James N.

    2007-01-30

    A biosensor for metal analysis and speciation is disclosed. The biosensor comprises an electron carrier immobilized to a surface of an electrode and a layer of an immobilized enzyme adjacent to the electrode. The immobilized enzyme comprises an enzyme having biological activity inhibited by a metal to be detected by the biosensor.

  11. The speciation of iodine in the environment

    International Nuclear Information System (INIS)

    Bulman, R.A.

    1986-01-01

    The speciation of iodine in the environment is discussed under the following topics: (i) sea surface to atmosphere, (ii) chemistry in bulk seawater, (iii) iodine in rocks, (iv) iodine in soils, (v) iodine in plants and (vi) iodine in solidified wastes. (author)

  12. Insurance billing and coding.

    Science.gov (United States)

    Napier, Rebecca H; Bruelheide, Lori S; Demann, Eric T K; Haug, Richard H

    2008-07-01

    The purpose of this article is to highlight the importance of understanding various numeric and alpha-numeric codes for accurately billing dental and medically related services to private pay or third-party insurance carriers. In the United States, common dental terminology (CDT) codes are most commonly used by dentists to submit claims, whereas current procedural terminology (CPT) and International Classification of Diseases, Ninth Revision, Clinical Modification (ICD.9.CM) codes are more commonly used by physicians to bill for their services. The CPT and ICD.9.CM coding systems complement each other in that CPT codes provide the procedure and service information and ICD.9.CM codes provide the reason or rationale for a particular procedure or service. These codes are more commonly used for "medical necessity" determinations, and general dentists and specialists who routinely perform care, including trauma-related care, biopsies, and dental treatment as a result of or in anticipation of a cancer-related treatment, are likely to use these codes. Claim submissions for care provided can be completed electronically or by means of paper forms.

  13. Numerical semigroups and applications

    CERN Document Server

    Assi, Abdallah

    2016-01-01

    This work presents applications of numerical semigroups in Algebraic Geometry, Number Theory, and Coding Theory. Background on numerical semigroups is presented in the first two chapters, which introduce basic notation and fundamental concepts and irreducible numerical semigroups. The focus is in particular on free semigroups, which are irreducible; semigroups associated with planar curves are of this kind. The authors also introduce semigroups associated with irreducible meromorphic series, and show how these are used in order to present the properties of planar curves. Invariants of non-unique factorizations for numerical semigroups are also studied. These invariants are computationally accessible in this setting, and thus this monograph can be used as an introduction to Factorization Theory. Since factorizations and divisibility are strongly connected, the authors show some applications to AG Codes in the final section. The book will be of value for undergraduate students (especially those at a higher leve...

  14. Transport theory and codes

    International Nuclear Information System (INIS)

    Clancy, B.E.

    1986-01-01

    This chapter begins with a neutron transport equation which includes the one dimensional plane geometry problems, the one dimensional spherical geometry problems, and numerical solutions. The section on the ANISN code and its look-alikes covers problems which can be solved; eigenvalue problems; outer iteration loop; inner iteration loop; and finite difference solution procedures. The input and output data for ANISN is also discussed. Two dimensional problems such as the DOT code are given. Finally, an overview of the Monte-Carlo methods and codes are elaborated on

  15. Hybridization and genome evolution I: The role of contingency during hybrid speciation

    Directory of Open Access Journals (Sweden)

    Fabrice EROUKHMANOFF, Richard I. BAILEY, Glenn-Peter SæTRE

    2013-10-01

    Full Text Available Homoploid hybrid speciation (HHS involves the recombination of two differentiated genomes into a novel, functional one without a change in chromosome number. Theoretically, there are numerous ways for two parental genomes to recombine. Hence, chance may play a large role in the formation of a hybrid species. If these genome combinations can evolve rapidly following hybridization and sympatric situations are numerous, recurrent homoploid hybrid speciation is a possibility. We argue that three different, but not mutually exclusive, types of contingencies could influence this process. First, many of these “hopeful monsters” of recombinant parent genotypes would likely have low fitness. Only specific combinations of parental genomic contributions may produce viable, intra-fertile hybrid species able to accommodate potential constraints arising from intragenomic conflict. Second, ecological conditions (competition, geography of the contact zones or the initial frequency of both parent species might favor different outcomes ranging from sympatric coexistence to the formation of hybrid swarms and ultimately hybrid speciation. Finally, history may also play an important role in promoting or constraining recurrent HHS if multiple hybridization events occur sequentially and parental divergence or isolation differs along this continuum. We discuss under which conditions HHS may occur multiple times in parallel and to what extent recombination and selection may fuse the parent genomes in the same or different ways. We conclude by examining different approaches that might help to solve this intriguing evolutionary puzzle [Current Zoology 59 (5: 667-674, 2013]. 

  16. Coding Partitions

    Directory of Open Access Journals (Sweden)

    Fabio Burderi

    2007-05-01

    Full Text Available Motivated by the study of decipherability conditions for codes weaker than Unique Decipherability (UD, we introduce the notion of coding partition. Such a notion generalizes that of UD code and, for codes that are not UD, allows to recover the ``unique decipherability" at the level of the classes of the partition. By tacking into account the natural order between the partitions, we define the characteristic partition of a code X as the finest coding partition of X. This leads to introduce the canonical decomposition of a code in at most one unambiguouscomponent and other (if any totally ambiguouscomponents. In the case the code is finite, we give an algorithm for computing its canonical partition. This, in particular, allows to decide whether a given partition of a finite code X is a coding partition. This last problem is then approached in the case the code is a rational set. We prove its decidability under the hypothesis that the partition contains a finite number of classes and each class is a rational set. Moreover we conjecture that the canonical partition satisfies such a hypothesis. Finally we consider also some relationships between coding partitions and varieties of codes.

  17. Trace element speciation in the environment

    International Nuclear Information System (INIS)

    Heumann, Klaus G.

    2001-01-01

    The production of methylated heavy metal species in the ocean was reviewed and shown to be correlated with biological parameters demonstrating them to be of biogenic origin. Methods for the determination of the species were discussed. The potential for the use of isotopic spiking either in 'species specific' or 'non-species specific' formats was identified as a valuable tool in the struggle for accuracy, specificity and precision in speciation analysis. The value of using a size exclusion chromatographic method in conjunction with non-species specific spiking IDMS was highlighted with an example illustrating the molecular mass fractions associated with halogenated species from a humic sample. Additional recommendations that the Agency might wish to consider when evaluating its potential role as a service to Member States engaged in speciation activities are also given

  18. Speciation and zoogeography of amphibian in Sundaland

    Directory of Open Access Journals (Sweden)

    Nia Kurniawan

    2015-12-01

    Full Text Available Sundaland is an interesting area to be explored based on its geological history, topography, and climate. Sundaland consists of Penisular Malaysia, Sumatra, Borneo, and Java which experienced some emergence and submergence process in the past. During 1981-2015, most of research in Sundaland found that amphibian family in Sundaland was dominated by Bufonidae, Ranidae, Microhylidae, Megophrydae, Rachophoridae, and Dicroglossidae which experienced lot of speciation in its history. Among of 4 major islands in Sundaland, Borneo has the highest number of species diversity, then Peninsular Malaysia, Sumatra, and Java. During those years, Sumatra and Java got least concern by researcher. Therefore, it is suggested for further study to explore more in Sumatra and Java. Keywords: Sundaland, amphibian, speciation, zoogeography.

  19. Speciation studies of cobalt in sea water

    International Nuclear Information System (INIS)

    Toteja, R.S.D.; Sudersanan, M.; Iyer, R.K.

    1995-01-01

    Recent results on the speciation of cobalt in simulated and actual sea water is reported using ion exchangers. The influence of magnesium ions in affecting the composition of ion exchangers and subsequent interpretation of the results is discussed. The results indicated that Co +2 may predominate in both the simulated and actual sea water and the presence of other constituents in sea water does not affect the nature of complex species present. (author). 2 refs., 3 tabs., 1 fig

  20. Tungsten Speciation in Firing Range Soils

    Science.gov (United States)

    2011-01-01

    satisfactorily, such as: which tungsten mineral phase is present in soil and to what extent is adsorption important in regu- lating soil solution concentrations... soil solution rather than discrete mineral phases. Information provided in this report will assist the following organizations in future decision...the soil solution ERDC TR-11-1 43 must affect tungsten speciation in other ways. The precipitation of soil minerals also would limit tungsten

  1. The genetics of speciation by reinforcement.

    Directory of Open Access Journals (Sweden)

    Daniel Ortiz-Barrientos

    2004-12-01

    Full Text Available Reinforcement occurs when natural selection strengthens behavioral discrimination to prevent costly interspecies matings, such as when matings produce sterile hybrids. This evolutionary process can complete speciation, thereby providing a direct link between Darwin's theory of natural selection and the origin of new species. Here, by examining a case of speciation by reinforcement in Drosophila,we present the first high-resolution genetic study of variation within species for female mating discrimination that is enhanced by natural selection. We show that reinforced mating discrimination is inherited as a dominant trait, exhibits variability within species, and may be influenced by a known set of candidate genes involved in olfaction. Our results show that the genetics of reinforced mating discrimination is different from the genetics of mating discrimination between species, suggesting that overall mating discrimination might be a composite phenomenon, which in Drosophila could involve both auditory and olfactory cues. Examining the genetics of reinforcement provides a unique opportunity for both understanding the origin of new species in the face of gene flow and identifying the genetic basis of adaptive female species preferences, two major gaps in our understanding of speciation.

  2. First passage time to allopatric speciation.

    Science.gov (United States)

    Yamaguchi, Ryo; Iwasa, Yoh

    2013-12-06

    Allopatric speciation is a mechanism to evolve reproductive isolation; it is caused by the accumulation of genetic differences between populations while they are geographically isolated. Here, we studied a simple stochastic model for the time until speciation caused by geographical isolation in fragmented populations that experience recurrent but infrequent migration between subpopulations. We assumed that mating incompatibility is controlled by a number of loci that behave as neutral characters in the accumulation of novel mutations within each population. Genetic distance between populations was defined as the number of incompatibility-controlling loci that differ between them. Genetic distance increases through the separate accumulation of mutations in different populations, but decreases after a successful migration event followed by genetic mixing between migrants and residents. We calculated the time to allopatric speciation, which occurs when the genetic distance exceeds a specified threshold. If the number of invasive individuals relative to the resident population is not very large, diffusion approximation provides an accurate prediction. There is an intermediate optimal rate of migration that maximizes the rate of species creation by recurrent invasion and diversification. We also examined cases that involved more than two populations.

  3. Arsenic speciation and sorption in natural environments

    Science.gov (United States)

    Campbell, Kate M.; Nordstrom, D. Kirk

    2014-01-01

    Aqueous arsenic speciation, or the chemical forms in which arsenic exists in water, is a challenging, interesting, and complicated aspect of environmental arsenic geochemistry. Arsenic has the ability to form a wide range of chemical bonds with carbon, oxygen, hydrogen, and sulfur, resulting in a large variety of compounds that exhibit a host of chemical and biochemical properties. Besides the intriguing chemical diversity, arsenic also has the rare capacity to capture our imaginations in a way that few elements can duplicate: it invokes images of foul play that range from sinister to comedic (e.g., “inheritance powder” and arsenic-spiked elderberry wine). However, the emergence of serious large-scale human health problems from chronic arsenic exposure in drinking water has placed a high priority on understanding environmental arsenic mobility, toxicity, and bioavailability, and chemical speciation is key to these important questions. Ultimately, the purpose of arsenic speciation research is to predict future occurrences, mitigate contamination, and provide successful management of water resources.

  4. Nuclear safety code study

    Energy Technology Data Exchange (ETDEWEB)

    Hu, H.H.; Ford, D.; Le, H.; Park, S.; Cooke, K.L.; Bleakney, T.; Spanier, J.; Wilburn, N.P.; O' Reilly, B.; Carmichael, B.

    1981-01-01

    The objective is to analyze an overpower accident in an LMFBR. A simplified model of the primary coolant loop was developed in order to understand the instabilities encountered with the MELT III and SAS codes. The computer programs were translated for switching to the IBM 4331. Numerical methods were investigated for solving the neutron kinetics equations; the Adams and Gear methods were compared. (DLC)

  5. Thermodynamics proposes, kinetics decides, speciation dares: speciation of actinides in biological media

    International Nuclear Information System (INIS)

    Ansoborlo, E.

    2005-06-01

    After having recalled the content and purpose of his research thesis, the author proposes a detailed overview of the research works he performed thereafter in the field of the speciation of actinides at the level of the organism entry gates and in target tissues. These works therefore concern four important areas of research in radioprotection: bio-kinetic, toxicology, decorporation, and dosimetry studies. The author outlines how speciation studies can be useful for these different areas, and to better understand and describe, and therefore foresee, the biokinetics and toxicity of radionuclides

  6. Electrospray mass spectrometry for actinides and lanthanide speciation

    International Nuclear Information System (INIS)

    Moulin, C.; Amekraz, B.; Colette, S.; Doizi, D.; Jacopin, C.; Lamouroux, C.; Plancque, G.

    2006-01-01

    Electrospray mass spectrometry (ES-MS) is a new speciation technique that has the great interest to be able to probe the element, the ligand and the complex in order to reach the speciation. This paper will focus on the use of ES-MS for the speciation of actinides/lanthanides on several systems of interest in various fields such as the interaction between DTPA (decorporant) and europium, HEBP and uranium, BTP (new extracting agent) and lanthanides with comparison with known chemistry as well as whenever possible with other speciation techniques

  7. Numerical analysis

    CERN Document Server

    Khabaza, I M

    1960-01-01

    Numerical Analysis is an elementary introduction to numerical analysis, its applications, limitations, and pitfalls. Methods suitable for digital computers are emphasized, but some desk computations are also described. Topics covered range from the use of digital computers in numerical work to errors in computations using desk machines, finite difference methods, and numerical solution of ordinary differential equations. This book is comprised of eight chapters and begins with an overview of the importance of digital computers in numerical analysis, followed by a discussion on errors in comput

  8. Numerical relativity

    CERN Document Server

    Shibata, Masaru

    2016-01-01

    This book is composed of two parts: First part describes basics in numerical relativity, that is, the formulations and methods for a solution of Einstein's equation and general relativistic matter field equations. This part will be helpful for beginners of numerical relativity who would like to understand the content of numerical relativity and its background. The second part focuses on the application of numerical relativity. A wide variety of scientific numerical results are introduced focusing in particular on the merger of binary neutron stars and black holes.

  9. Contributions to multiple element speciation in vegetable plants: Studies on the type of bonding of numerous elements, particularly zinc and cadmium; Beitraege zur Multielement-Speziation in pflanzlichen Lebensmitteln: Studien zur Bindungsform zahlreicher Elemente unter besonderer Beruecksichtigung von Zink und Cadmium

    Energy Technology Data Exchange (ETDEWEB)

    Guenther, K.

    1997-03-01

    In the first part of the study, the total contents and the solubility characteristics of Zn, Cd, Fe, Mn, Cu, Ca, Sr, K and Rb in 26 different vegetable plants, the majority of them commercially available, are reported, obtained by post-decomposition analyses. The data are given for avocados, bananas, cauliflower, chicory, Chinese cabbage, dill, ice lettuce (two specimens), endive, field salad, cucumbers, kohlrabi, lettuce, chard beet, carrots, peppers, leek, radish, red cabbage, loose leaved lettuce, celery (two specimens), spinach, topinambur, white cabbage, and parsley. Cell decomposition was done by treatment of the plant material with an electric dispersing apparatus (Ultra-Turrax) in buffer solution (liquid shearing). The homogenates were separated into supernatants (cytosoles)and pellets by means of centrifugation. Cell decomposition of the plants by crushing with quartz sand after lyophilization (solid shearing) required much more technical effort and for some elements created problems with the blind values. At least 50% on the average of the elements Zn, Cd, Rb, and K could be transferred to the solutions by the dispersing treatment with Ultra-Turrax. In many cases, the cytosole-borne detectable contents of these 5 elements were above 70%. The solubility of Zn and Cd was more strongly dependent on the plant species than that of Cu, Rb, and K. All five elements thus can be analysed by conventional methods for further enhanced speciation. Mn, Ca, and especially Fe and Sr for the most part were found to be bonded to solid cell constituents. However, the solubility characteristics of Ca and Mn and Sr in particular was very homogeneous. In some plants, the contents of Mn and Sr in the cytosoles was approx. 90%, so that comprehensive speciation of these elements is possible. (orig./AJ) [Deutsch] Im ersten Teil dieser Studie wurden die Gesamtgehalte und das Loeslichkeitsverhalten von Zn, Cd, Fe, Mn, Cu, Ca, Sr, K und Rb in 26 verschiedenen - ueberwiegend

  10. Rapid allopatric speciation in logperch darters (Percidae: Percina).

    Science.gov (United States)

    Near, Thomas J; Benard, Michael F

    2004-12-01

    Theory predicts that clades diversifying via sympatric speciation will exhibit high diversification rates. However, the expected rate of diversification in clades characterized by allopatric speciation is less clear. Previous studies have documented significantly higher speciation rates in freshwater fish clades diversifying via sympatric versus allopatric modes, leading to suggestions that the geographic pattern of speciation can be inferred solely from knowledge of the diversification rate. We tested this prediction using an example from darters, a clade of approximately 200 species of freshwater fishes endemic to eastern North America. A resolved phylogeny was generated using mitochondrial DNA gene sequences for logperches, a monophyletic group of darters composed of 10 recognized species. Divergence times among logperch species were estimated using a fossil calibrated molecular clock in centrarchid fishes, and diversification rates in logperches were estimated using several methods. Speciation events in logperches are recent, extending from 4.20 +/- 1.06 million years ago (mya) to 0.42 +/- 0.22 mya, with most speciation events occurring in the Pleistocene. Diversification rates are high in logperches, at some nodes exceeding rates reported for well-studied adaptive radiations such as Hawaiian silverswords. The geographic pattern of speciation in logperches was investigated by examining the relationship between degree of sympatry and the absolute age of the contrast, with the result that diversification in logperches appears allopatric. The very high diversification rate observed in the logperch phylogeny is more similar to freshwater fish clades thought to represent examples of sympatric speciation than to clades representing allopatric speciation. These results demonstrate that the geographic mode of speciation for a clade cannot be inferred from the diversification rate. The empirical observation of high diversification rates in logperches demonstrates that

  11. Plutonium Speciation, Solubilization and Migration in Soils

    International Nuclear Information System (INIS)

    Neu, M.; Runde, W.

    1999-01-01

    This report summarizes research completed in the first half of a three-year project. As outlined in the authors' proposal they are focusing on (1) characterizing the plutonium at an actinide contaminated site, RFETS, including determining the origin, dispersion, and speciation of the plutonium, (2) studying environmentally important plutonium complexes, primarily hydroxides and carbonates, and (3) examining the interactions of plutonium species with manganese minerals. In the first year the authors focused on site based studies. This year they continue to characterize samples from the RFETS, study the formation and structural and spectroscopic features of environmentally relevant Pu species, and begin modeling the environmental behavior of plutonium

  12. Speciation of arsenic in biological samples.

    Science.gov (United States)

    Mandal, Badal Kumar; Ogra, Yasumitsu; Anzai, Kazunori; Suzuki, Kazuo T

    2004-08-01

    Speciation of arsenicals in biological samples is an essential tool to gain insight into its distribution in tissues and its species-specific toxicity to target organs. Biological samples (urine, hair, fingernail) examined in the present study were collected from 41 people of West Bengal, India, who were drinking arsenic (As)-contaminated water, whereas 25 blood and urine samples were collected from a population who stopped drinking As contaminated water 2 years before the blood collection. Speciation of arsenicals in urine, water-methanol extract of freeze-dried red blood cells (RBCs), trichloroacetic acid treated plasma, and water extract of hair and fingernail was carried out by high-performance liquid chromatography (HPLC)-inductively coupled argon plasma mass spectrometry (ICP MS). Urine contained arsenobetaine (AsB, 1.0%), arsenite (iAs(III), 11.3), arsenate (iAs(V), 10.1), monomethylarsonous acid (MMA(III), 6.6), monomethylarsonic acid (MMA(V), 10.5), dimethylarsinous acid (DMA(III), 13.0), and dimethylarsinic acid (DMA(V), 47.5); fingernail contained iAs(III) (62.4%), iAs(V) (20.2), MMA(V) (5.7), DMA(III) (8.9), and DMA(V) (2.8); hair contained iAs(III) (58.9%), iAs(V) (34.8), MMA(V) (2.9), and DMA(V) (3.4); RBCs contained AsB (22.5%) and DMA(V) (77.5); and blood plasma contained AsB (16.7%), iAs(III) (21.1), MMA(V) (27.1), and DMA(V) (35.1). MMA(III), DMA(III), and iAs(V) were not found in any plasma and RBCs samples, but urine contained all of them. Arsenic in urine, fingernails, and hair are positively correlated with water As, suggesting that any of these measurements could be considered as a biomarker to As exposure. Status of urine and exogenous contamination of hair urgently need speciation of As in these samples, but speciation of As in nail is related to its total As (tAs) concentration. Therefore, total As concentrations of nails could be considered as biomarker to As exposure in the endemic areas.

  13. Speciation of arsenic in biological samples

    International Nuclear Information System (INIS)

    Mandal, Badal Kumar; Ogra, Yasumitsu; Anzai, Kazunori; Suzuki, Kazuo T.

    2004-01-01

    Speciation of arsenicals in biological samples is an essential tool to gain insight into its distribution in tissues and its species-specific toxicity to target organs. Biological samples (urine, hair, fingernail) examined in the present study were collected from 41 people of West Bengal, India, who were drinking arsenic (As)-contaminated water, whereas 25 blood and urine samples were collected from a population who stopped drinking As contaminated water 2 years before the blood collection. Speciation of arsenicals in urine, water-methanol extract of freeze-dried red blood cells (RBCs), trichloroacetic acid treated plasma, and water extract of hair and fingernail was carried out by high-performance liquid chromatography (HPLC)-inductively coupled argon plasma mass spectrometry (ICP MS). Urine contained arsenobetaine (AsB, 1.0%), arsenite (iAs III , 11.3), arsenate (iAs V , 10.1), monomethylarsonous acid (MMA III , 6.6), monomethylarsonic acid (MMA V , 10.5), dimethylarsinous acid (DMA III , 13.0), and dimethylarsinic acid (DMA V , 47.5); fingernail contained iAs III (62.4%), iAs V (20.2), MMA V (5.7), DMA III (8.9), and DMA V (2.8); hair contained iAs III (58.9%), iAs V (34.8), MMA V (2.9), and DMA V (3.4); RBCs contained AsB (22.5%) and DMA V (77.5); and blood plasma contained AsB (16.7%), iAs III (21.1), MMA V (27.1), and DMA V (35.1). MMA III , DMA III , and iAs V were not found in any plasma and RBCs samples, but urine contained all of them. Arsenic in urine, fingernails, and hair are positively correlated with water As, suggesting that any of these measurements could be considered as a biomarker to As exposure. Status of urine and exogenous contamination of hair urgently need speciation of As in these samples, but speciation of As in nail is related to its total As (tAs) concentration. Therefore, total As concentrations of nails could be considered as biomarker to As exposure in the endemic areas

  14. Dynamic speciation analysis and bioavailability of metals in aquatic systems

    NARCIS (Netherlands)

    Leeuwen, van H.P.; Town, R.M.; Buffle, J.; Cleven, R.F.M.J.; Davison, W.; Puy, J.; Riemsdijk, van W.H.; Sigg, L.

    2005-01-01

    Dynamic metal speciation analysis in aquatic ecosystems is emerging as a powerful basis for development of predictions of bioavailability and reliable risk assessment strategies. A given speciation sensor is characterized by an effective time scale or kinetic window that defines the measurable metal

  15. Parasites Promote and When Might They Constrain Ecological Speciation?

    Directory of Open Access Journals (Sweden)

    Anssi Karvonen

    2012-01-01

    Full Text Available Research on speciation and adaptive radiation has flourished during the past decades, yet factors underlying initiation of reproductive isolation often remain unknown. Parasites represent important selective agents and have received renewed attention in speciation research. We review the literature on parasite-mediated divergent selection in context of ecological speciation and present empirical evidence for three nonexclusive mechanisms by which parasites might facilitate speciation: reduced viability or fecundity of immigrants and hybrids, assortative mating as a pleiotropic by-product of host adaptation, and ecologically-based sexual selection. We emphasise the lack of research on speciation continuums, which is why no study has yet made a convincing case for parasite driven divergent evolution to initiate the emergence of reproductive isolation. We also point interest towards selection imposed by single versus multiple parasite species, conceptually linking this to strength and multifariousness of selection. Moreover, we discuss how parasites, by manipulating behaviour or impairing sensory abilities of hosts, may change the form of selection that underlies speciation. We conclude that future studies should consider host populations at variable stages of the speciation process, and explore recurrent patterns of parasitism and resistance that could pinpoint the role of parasites in imposing the divergent selection that initiates ecological speciation.

  16. Self-consistent approach for neutral community models with speciation

    NARCIS (Netherlands)

    Haegeman, Bart; Etienne, Rampal S.

    Hubbell's neutral model provides a rich theoretical framework to study ecological communities. By incorporating both ecological and evolutionary time scales, it allows us to investigate how communities are shaped by speciation processes. The speciation model in the basic neutral model is

  17. The neutral theory of biodiversity with random fission speciation

    NARCIS (Netherlands)

    Etienne, Rampal S.; Haegeman, Bart

    The neutral theory of biodiversity and biogeography emphasizes the importance of dispersal and speciation to macro-ecological diversity patterns. While the influence of dispersal has been studied quite extensively, the effect of speciation has not received much attention, even though it was already

  18. What do we need to know about speciation?

    NARCIS (Netherlands)

    Butlin, Roger; Debelle, Allan; Kerth, Claudius; Snook, Rhonda R.; Beukeboom, Leo W.; Castillo Cajas, Ruth; Diao, Wenwen; Maan, Martine E.; Paolucci, Silvia; Weissing, Franz J.; van de Zande, Louis; Hoikkala, Anneli; Geuverink, Elzemiek; Jennings, Jackson; Kankare, Maaria; Knott, K. Emily; Tyukmaeva, Venera I.; Zoumadakis, Christos; Ritchie, Michael G.; Barker, Daniel; Immonen, Elina; Kirkpatrick, Mark; Noor, Mohamed; Macias Garcia, Constantino; Schmitt, Thomas; Schilthuizen, Menno

    Speciation has been a major focus of evolutionary biology research in recent years, with many important advances. However, some of the traditional organising principles of the subject area no longer provide a satisfactory framework, such as the classification of speciation mechanisms by geographical

  19. Speaking Code

    DEFF Research Database (Denmark)

    Cox, Geoff

    Speaking Code begins by invoking the “Hello World” convention used by programmers when learning a new language, helping to establish the interplay of text and code that runs through the book. Interweaving the voice of critical writing from the humanities with the tradition of computing and software...

  20. Speciation imperatives for waste management and environmental pollution

    International Nuclear Information System (INIS)

    Wymer, R.G.

    2001-01-01

    This paper addresses speciation requirements in the context of problems produced by nuclear energy and nuclear weapons production. These problems are primarily in the areas of waste management, material contamination, and environmental pollution. They pose difficult and important measurement and speciation challenges. Examples of speciation requirements in the context of national and international regulations are presented to exemplify and make quantitative the types of problems posed by waste management, material contamination, and environmental pollution. The importance of identifying species present in the natural environment as well as in wastes from chemical and physical processing and from waste management activities and accidental releases is addressed. Differing speciation requirements for macro and micro concentrations of species are discussed. The role of speciation in modelling studies is discussed. (author)

  1. Introduction of SCIENCE code package

    International Nuclear Information System (INIS)

    Lu Haoliang; Li Jinggang; Zhu Ya'nan; Bai Ning

    2012-01-01

    The SCIENCE code package is a set of neutronics tools based on 2D assembly calculations and 3D core calculations. It is made up of APOLLO2F, SMART and SQUALE and used to perform the nuclear design and loading pattern analysis for the reactors on operation or under construction of China Guangdong Nuclear Power Group. The purpose of paper is to briefly present the physical and numerical models used in each computation codes of the SCIENCE code pack age, including the description of the general structure of the code package, the coupling relationship of APOLLO2-F transport lattice code and SMART core nodal code, and the SQUALE code used for processing the core maps. (authors)

  2. The rate test of speciation: estimating the likelihood of non-allopatric speciation from reproductive isolation rates in Drosophila.

    Science.gov (United States)

    Yukilevich, Roman

    2014-04-01

    Among the most debated subjects in speciation is the question of its mode. Although allopatric (geographical) speciation is assumed the null model, the importance of parapatric and sympatric speciation is extremely difficult to assess and remains controversial. Here I develop a novel approach to distinguish these modes of speciation by studying the evolution of reproductive isolation (RI) among taxa. I focus on the Drosophila genus, for which measures of RI are known. First, I incorporate RI into age-range correlations. Plots show that almost all cases of weak RI are between allopatric taxa whereas sympatric taxa have strong RI. This either implies that most reproductive isolation (RI) was initiated in allopatry or that RI evolves too rapidly in sympatry to be captured at incipient stages. To distinguish between these explanations, I develop a new "rate test of speciation" that estimates the likelihood of non-allopatric speciation given the distribution of RI rates in allopatry versus sympatry. Most sympatric taxa were found to have likely initiated RI in allopatry. However, two putative candidate species pairs for non-allopatric speciation were identified (5% of known Drosophila). In total, this study shows how using RI measures can greatly inform us about the geographical mode of speciation in nature. © 2013 The Author(s). Evolution © 2013 The Society for the Study of Evolution.

  3. Hybrid undulator numerical optimization

    Energy Technology Data Exchange (ETDEWEB)

    Hairetdinov, A.H. [Kurchatov Institute, Moscow (Russian Federation); Zukov, A.A. [Solid State Physics Institute, Chernogolovka (Russian Federation)

    1995-12-31

    3D properties of the hybrid undulator scheme arc studied numerically using PANDIRA code. It is shown that there exist two well defined sets of undulator parameters which provide either maximum on-axis field amplitude or minimal higher harmonics amplitude of the basic undulator field. Thus the alternative between higher field amplitude or pure sinusoidal field exists. The behavior of the undulator field amplitude and harmonics structure for a large set of (undulator gap)/(undulator wavelength) values is demonstrated.

  4. Relative Bioavailability and Bioaccessability and Speciation of ...

    Science.gov (United States)

    Background: Assessment of soil arsenic (As) bioavailability may profoundly affect the extent of remediation required at contaminated sites by improving human exposure estimates. Because small adjustments in soil As bioavailability estimates can significantly alter risk assessments and remediation goals, convenient, rapid, reliable, and inexpensive tools are needed to determine soil As bioavailability. Objectives: We evaluated inexpensive methods for assessing As bioavailability in soil as a means to improve human exposure estimates and potentially reduce remediation costs. Methods: Nine soils from residential sites affected by mining or smelting activity and two National Institute of Standards and Technology standard reference materials were evaluated for As bioavailability, bioaccessibility, and speciation. Arsenic bioavailability was determined using an in vivo mouse model, and As bioaccessibility was determined using the Solubility/Bioavailability Research Consortium in vitro assay. Arsenic speciation in soil and selected soil physicochemical properties were also evaluated to determine whether these parameters could be used as predictors of As bio¬availability and bioaccessibility. Results: In the mouse assay, we compared bioavailabilities of As in soils with that for sodium arsenate. Relative bioavailabilities (RBAs) of soil As ranged from 11% to 53% (mean, 33%). In vitro soil As bioaccessibility values were strongly correlated with soil As RBAs (R

  5. Uranium(VI) speciation by spectroscopy

    International Nuclear Information System (INIS)

    Meinrath, G.

    1997-01-01

    The application of UV-Vis and time-resolved laser-induced fluorescence (TRLF) spectroscopies to direct of uranium(VI) in environmental samples offers various prospects that have, however, serious limitations. While UV-Vis spectroscopy is probably not sensitive enough to detect uranium(VI) species in the majority of environmental samples, TRLFS is principially able to speciate uranium(VI) at very low concentration levels in the nanomol range. Speciation by TRLFS can be based on three parameters: excitation spectrum, emission spectrum and lifetime of the fluorescence emission process. Due to quenching effects, the lifetime may not be expected to be as characteristics as, e.g., the emission spectrum. Quenching of U(VI) fluorescence by reaction with organic substances, inorganic ions and formation of carbonate radicals is one important limiting factor in the application of U(VI) fluorescence spectroscopy. Fundamental photophysical criteria are illustrated using UV-Vis and fluorescence spectra of U(VI) hydrolysis and carbonato species as examples. (author)

  6. Resolving uncertainty in chemical speciation determinations

    Science.gov (United States)

    Smith, D. Scott; Adams, Nicholas W. H.; Kramer, James R.

    1999-10-01

    Speciation determinations involve uncertainty in system definition and experimentation. Identification of appropriate metals and ligands from basic chemical principles, analytical window considerations, types of species and checking for consistency in equilibrium calculations are considered in system definition uncertainty. A systematic approach to system definition limits uncertainty in speciation investigations. Experimental uncertainty is discussed with an example of proton interactions with Suwannee River fulvic acid (SRFA). A Monte Carlo approach was used to estimate uncertainty in experimental data, resulting from the propagation of uncertainties in electrode calibration parameters and experimental data points. Monte Carlo simulations revealed large uncertainties present at high (>9-10) and low (monoprotic ligands. Least-squares fit the data with 21 sites, whereas linear programming fit the data equally well with 9 sites. Multiresponse fitting, involving simultaneous fluorescence and pH measurements, improved model discrimination. Deconvolution of the excitation versus emission fluorescence surface for SRFA establishes a minimum of five sites. Diprotic sites are also required for the five fluorescent sites, and one non-fluorescent monoprotic site was added to accommodate the pH data. Consistent with greater complexity, the multiresponse method had broader confidence limits than the uniresponse methods, but corresponded better with the accepted total carboxylic content for SRFA. Overall there was a 40% standard deviation in total carboxylic content for the multiresponse fitting, versus 10% and 1% for least-squares and linear programming, respectively.

  7. Chromium fractionation and speciation in natural waters.

    Science.gov (United States)

    Pereira, Catarinie Diniz; Techy, João Gabriel; Ganzarolli, Edgard Moreira; Quináia, Sueli Pércio

    2012-05-01

    It is common for leather industries to dump chromium-contaminated effluent into rivers and other bodies of water. Thus, it is crucial to know the impacts caused by this practice to the environment. A study on chromium partitioning and speciation, with determination at trace levels, was carried out in a potentially contaminated creek. Chromium fractionation and speciation was performed using a flow-injection preconcentration system and detection by flame atomic absorption spectrometry. High levels of this element were found in the particulate material (449-9320 mg kg(-1)), which indicates its compatibility with this fraction. The concentration of Cr(iii) in the water samples collected ranged from 5.2-105.2 μg L(-1). Cr(vi) was always below of the DL (0.3 μg L(-1)). Chromium accumulation observed in the sediment (873-1691 mg kg(-1)) may confirm contamination due to the long term release of contaminated effluents in the creek.

  8. Speciation of animal fat: Needs and challenges.

    Science.gov (United States)

    Hsieh, Yun-Hwa Peggy; Ofori, Jack Appiah

    2017-05-24

    The use of pork fat is a concern for Muslims and Jews, who for religious reasons avoid consuming anything that is pig-derived. The use of bovine materials, including beef fat, is prohibited in Hinduism and may also pose a risk of carrying the infectious agent for bovine spongiform encephalopathy. Vegetable oils are sometimes adulterated with animal fat or pork fat with beef fat for economic gain. The development of methods to determine the species origin of fat has therefore become a priority due to the complex and global nature of the food trade, which creates opportunities for the fraudulent use of these animal fats as food ingredients. However, determining the species origin of fats in processed foods or composite blends is an arduous task as the adulterant has a composition that is very similar to that of the original fat or oil. This review examines some of the methods that have been developed for fat speciation, including both fat-based and DNA-based methods, their shortcomings, and the need for additional alternatives. Protein-based methods, specifically immunoassays targeting residual proteins in adipose tissue, that are being explored by researchers as a new tool for fat speciation will also be discussed.

  9. Numerical Development

    Science.gov (United States)

    Siegler, Robert S.; Braithwaite, David W.

    2016-01-01

    In this review, we attempt to integrate two crucial aspects of numerical development: learning the magnitudes of individual numbers and learning arithmetic. Numerical magnitude development involves gaining increasingly precise knowledge of increasing ranges and types of numbers: from non-symbolic to small symbolic numbers, from smaller to larger…

  10. Hindi Numerals.

    Science.gov (United States)

    Bright, William

    In most languages encountered by linguists, the numerals, considered as a paradigmatic set, constitute a morpho-syntactic problem of only moderate complexity. The Indo-Aryan language family of North India, however, presents a curious contrast. The relatively regular numeral system of Sanskrit, as it has developed historically into the modern…

  11. Geochemical computer codes. A review

    International Nuclear Information System (INIS)

    Andersson, K.

    1987-01-01

    In this report a review of available codes is performed and some code intercomparisons are also discussed. The number of codes treating natural waters (groundwater, lake water, sea water) is large. Most geochemical computer codes treat equilibrium conditions, although some codes with kinetic capability are available. A geochemical equilibrium model consists of a computer code, solving a set of equations by some numerical method and a data base, consisting of thermodynamic data required for the calculations. There are some codes which treat coupled geochemical and transport modeling. Some of these codes solve the equilibrium and transport equations simultaneously while other solve the equations separately from each other. The coupled codes require a large computer capacity and have thus as yet limited use. Three code intercomparisons have been found in literature. It may be concluded that there are many codes available for geochemical calculations but most of them require a user that us quite familiar with the code. The user also has to know the geochemical system in order to judge the reliability of the results. A high quality data base is necessary to obtain a reliable result. The best results may be expected for the major species of natural waters. For more complicated problems, including trace elements, precipitation/dissolution, adsorption, etc., the results seem to be less reliable. (With 44 refs.) (author)

  12. Numerical analysis

    CERN Document Server

    Rao, G Shanker

    2006-01-01

    About the Book: This book provides an introduction to Numerical Analysis for the students of Mathematics and Engineering. The book is designed in accordance with the common core syllabus of Numerical Analysis of Universities of Andhra Pradesh and also the syllabus prescribed in most of the Indian Universities. Salient features: Approximate and Numerical Solutions of Algebraic and Transcendental Equation Interpolation of Functions Numerical Differentiation and Integration and Numerical Solution of Ordinary Differential Equations The last three chapters deal with Curve Fitting, Eigen Values and Eigen Vectors of a Matrix and Regression Analysis. Each chapter is supplemented with a number of worked-out examples as well as number of problems to be solved by the students. This would help in the better understanding of the subject. Contents: Errors Solution of Algebraic and Transcendental Equations Finite Differences Interpolation with Equal Intervals Interpolation with Unequal Int...

  13. PEAR code review

    International Nuclear Information System (INIS)

    De Wit, R.; Jamieson, T.; Lord, M.; Lafortune, J.F.

    1997-07-01

    As a necessary component in the continuous improvement and refinement of methodologies employed in the nuclear industry, regulatory agencies need to periodically evaluate these processes to improve confidence in results and ensure appropriate levels of safety are being achieved. The independent and objective review of industry-standard computer codes forms an essential part of this program. To this end, this work undertakes an in-depth review of the computer code PEAR (Public Exposures from Accidental Releases), developed by Atomic Energy of Canada Limited (AECL) to assess accidental releases from CANDU reactors. PEAR is based largely on the models contained in the Canadian Standards Association (CSA) N288.2-M91. This report presents the results of a detailed technical review of the PEAR code to identify any variations from the CSA standard and other supporting documentation, verify the source code, assess the quality of numerical models and results, and identify general strengths and weaknesses of the code. The version of the code employed in this review is the one which AECL intends to use for CANDU 9 safety analyses. (author)

  14. LJUNGSKILE 1.0 A Computer Program for Investigation of Uncertainties in Chemical Speciation

    International Nuclear Information System (INIS)

    Ekberg, Christian; Oedegaard-Jensen, Arvid

    2002-11-01

    In analysing the long-term safety of nuclear waste disposal, there is a need to investigate uncertainties in chemical speciation calculations. Chemical speciation is of importance in evaluating the solubility of radionuclides, the chemical degradation of engineering materials, and chemical processes controlling groundwater composition. The uncertainties in chemical speciation may for instance be related to uncertainties in thermodynamic data, the groundwater composition, or the extrapolation to the actual temperature and ionic strength. The magnitude of such uncertainties and its implications are seldom explicitly evaluated in any detail. Commonly available chemical speciation programmes normally do not have a build-in option to include uncertainty ranges. The program developed within this project has the capability of incorporating uncertainty ranges in speciation calculations and can be used for graphical presentation of uncertainty ranges for dominant species. The program should be regarded as a starting point for assessing uncertainties in chemical speciation, since it is not yet comprehensive in its capabilities. There may be limitations in its usefulness to address various geochemical problems. The LJUNGSKILE code allows the user to select two approaches: the Monte Carlo (MC) approach and the Latin Hypercube Sampling (LHS). LHS allows to produce a satisfactory statistics with a minimum of CPU time. It is, in general, possible to do a simple theoretical speciation calculation within seconds. There are, admittedly, alternatives to LHS and there is criticism towards the uncritical use of LHS output because commonly correlation between some of the input variables exists. LHS, like MC, is not capable to take these correlations into account. Such a correlation can, i.e. exist between the pH of a solution and the partial pressure of CO 2 : higher pH solutions may absorb larger amounts of CO 2 and can reduce the CO 2 partial pressure. It is therefore of advantage to

  15. Arsenic, Antimony, Chromium, and Thallium Speciation in Water and Sediment Samples with the LC-ICP-MS Technique

    Directory of Open Access Journals (Sweden)

    Magdalena Jabłońska-Czapla

    2015-01-01

    Full Text Available Chemical speciation is a very important subject in the environmental protection, toxicology, and chemical analytics due to the fact that toxicity, availability, and reactivity of trace elements depend on the chemical forms in which these elements occur. Research on low analyte levels, particularly in complex matrix samples, requires more and more advanced and sophisticated analytical methods and techniques. The latest trends in this field concern the so-called hyphenated techniques. Arsenic, antimony, chromium, and (underestimated thallium attract the closest attention of toxicologists and analysts. The properties of those elements depend on the oxidation state in which they occur. The aim of the following paper is to answer the question why the speciation analytics is so important. The paper also provides numerous examples of the hyphenated technique usage (e.g., the LC-ICP-MS application in the speciation analysis of chromium, antimony, arsenic, or thallium in water and bottom sediment samples. An important issue addressed is the preparation of environmental samples for speciation analysis.

  16. Coding Labour

    Directory of Open Access Journals (Sweden)

    Anthony McCosker

    2014-03-01

    Full Text Available As well as introducing the Coding Labour section, the authors explore the diffusion of code across the material contexts of everyday life, through the objects and tools of mediation, the systems and practices of cultural production and organisational management, and in the material conditions of labour. Taking code beyond computation and software, their specific focus is on the increasingly familiar connections between code and labour with a focus on the codification and modulation of affect through technologies and practices of management within the contemporary work organisation. In the grey literature of spreadsheets, minutes, workload models, email and the like they identify a violence of forms through which workplace affect, in its constant flux of crisis and ‘prodromal’ modes, is regulated and governed.

  17. High resolution microprofiling, fractionation and speciation at sediment water interfaces

    Science.gov (United States)

    Fabricius, Anne-Lena; Duester, Lars; Ecker, Dennis; Ternes, Thomas A.

    2016-04-01

    Within aquatic environments, the exchange between the sediment and the overlaying water is often driven by steep gradients of, e.g., the oxygen concentration, the redox potential or the pH value at the sediment water interface (SWI). Important transport processes at the SWI are sedimentation and resuspension of particulate matter and diffusional fluxes of dissolved substances. To gain a better understanding of the key factors and processes determining the fate of substances at the SWI, methods with a spatial high resolution are required that enable the investigation of several sediment parameters in parallel to different analytes of interest in the sediment pore water. Moreover, beside the total content, questions concerning the speciation and fractionation are of concern in studying the different (transport) processes. Due to the availability of numerous micro-sensors and -electrodes (e.g., O2, redox potential, pH value, H2S, N2O) and the development of methods for pore water sampling [1], the toolbox to study the heterogeneous and often dynamic conditions at the SWI at a sub-millimetre scale were considerably improved. Nevertheless, the methods available for pore water sampling often require the installation of the sampling devices at the sampling site and/or intensive preparation procedures that may influence the conditions at the area studied and/or the characteristics of the samples taken. By combination of a micro profiling system with a new micro filtration probe head connected to a pump and a fraction collector, a micro profiling and micro sampling system ("missy") was developed that enables for the first time a direct, automate and low invasive sampling of small volumes (content of metal(loid)s, but also their fractionation (size dependent and micelle mediated) or speciation related distributions along sediment depth profiles in parallel to different sediment parameters (O2, redox and pH). Together with the results of missy-experiments, the results of

  18. EPA’s SPECIATE 4.4 Database:Development and Uses

    Science.gov (United States)

    SPECIATE is the U.S. Environmental Protection Agency's (EPA)repository of volatile organic gas and particulate matter (PM) speciation profiles for air pollution sources. EPA released SPECIATE 4.4 in early 2014 and, in total, the SPECIATE 4.4 database includes 5,728 PM, VOC, total...

  19. Sexual selection and magic traits in speciation with gene flow

    Directory of Open Access Journals (Sweden)

    Maria R. SERVEDIO, Michael KOPP

    2012-06-01

    Full Text Available The extent to which sexual selection is involved in speciation with gene flow remains an open question and the subject of much research. Here, we propose that some insight can be gained from considering the concept of magic traits (i.e., traits involved in both reproductive isolation and ecological divergence. Both magic traits and other, “non-magic”, traits can contribute to speciation via a number of specific mechanisms. We argue that many of these mechanisms are likely to differ widely in the extent to which they involve sexual selection. Furthermore, in some cases where sexual selection is present, it may be prone to inhibit rather than drive speciation. Finally, there are a priori reasons to believe that certain categories of traits are much more effective than others in driving speciation. The combination of these points suggests a classification of traits that may shed light on the broader role of sexual selection in speciation with gene flow. In particular, we suggest that sexual selection can act as a driver of speciation in some scenarios, but may play a negligible role in potentially common categories of magic traits, and may be likely to inhibit speciation in common categories of non-magic traits [Current Zoology 58 (3: 507–513, 2012].

  20. Numerical analysis

    CERN Document Server

    Scott, L Ridgway

    2011-01-01

    Computational science is fundamentally changing how technological questions are addressed. The design of aircraft, automobiles, and even racing sailboats is now done by computational simulation. The mathematical foundation of this new approach is numerical analysis, which studies algorithms for computing expressions defined with real numbers. Emphasizing the theory behind the computation, this book provides a rigorous and self-contained introduction to numerical analysis and presents the advanced mathematics that underpin industrial software, including complete details that are missing from most textbooks. Using an inquiry-based learning approach, Numerical Analysis is written in a narrative style, provides historical background, and includes many of the proofs and technical details in exercises. Students will be able to go beyond an elementary understanding of numerical simulation and develop deep insights into the foundations of the subject. They will no longer have to accept the mathematical gaps that ex...

  1. Speciation issues in food control - are we ready?

    International Nuclear Information System (INIS)

    Sloth, J.J.; Hedegaard, R.V.; Julshamn, K.; Trier, X.T.; Larsen, E.H.

    2009-01-01

    Full text: Our understanding of the mechanisms of biological activities and biotransformation of trace elements has improved during recent years with the help of chemical speciation studies. However, the most important practical application of elemental speciation is in the area of toxicology. Toxicological knowledge on the individual chemical elemental species should lead to more specific legislation of hazardous substances. Presently, European legislation concerning food safety is based on total element concentrations expressed as maximum limits. The lecture focuses on the present situation for speciation in food control and discusses the latest and expected future developments within this area. (author)

  2. NICKEL SPECIATION OF URBAN PARTICULATE MATTER

    Energy Technology Data Exchange (ETDEWEB)

    Kevin C. Galbreath; Charlene R. Crocker; Carolyn M. Nyberg; Frank E. Huggins; Gerald P. Huffman

    2003-10-01

    A four-step sequential Ni extraction method, summarized in Table AB-1, was evaluated for identifying and quantifying the Ni species occurring in urban total suspended particulate (TSP) matter and fine particulate matter (<10 {micro}m [PM{sub 10}] and <2.5 {micro}m [PM{sub 2.5}] in aerodynamic diameter). The extraction method was originally developed for quantifying soluble, sulfidic, elemental, and oxidic forms of Ni that may occur in industrial atmospheres. X-ray diffraction (XRD) and x-ray absorption fine structure (XAFS) spectroscopy were used to evaluate the Ni species selectivity of the extraction method. Uncertainties in the chemical speciation of Ni in urban PM{sub 10} and PM{sub 2.5} greatly affect inhalation health risk estimates, primarily because of the large variability in acute, chronic, and cancer-causing effects for different Ni compounds.

  3. Selenium speciation from farm to faeces

    International Nuclear Information System (INIS)

    Larsen, E.H.; Kapolna, E.; Hillestroem, P.R.; Laursen, K.; Budek, A.; Husted, S.; Buegel, S.

    2009-01-01

    Full text:The content and speciation of Se were studied in food crops originating from organic and conventional cultivation schemes. Additionally, carrots and onions were biofortified and intrinsically labelled using foliar spraying with isotopically enriched 77 SeO 3 -2 . HPLC-ICPMS and HPLC-ESIMS/MS analysis revealed that Se was mainly metabolized to 77 SeMet and to Me 77 SeCys, also in carrot. The 77 Se plants were processed to food (50 μg 77 Se/d) for a human intervention study. The isotopic enrichment by 77 Se as well as 67 Zn and 65 Cu in urine and faeces was determined by ICP(DRC)MS and the mineral absorption rates estimated. (author)

  4. Chemical speciation of radionuclides migrating in groundwaters

    International Nuclear Information System (INIS)

    Robertson, D.; Schilk, A.; Abel, K.; Lepel, E.; Thomas, C.; Pratt, S.; Cooper, E.; Hartwig, P.; Killey, R.

    1994-04-01

    In order to more accurately predict the rates and mechanisms of radionuclide migration from low-level waste disposal facilities via groundwater transport, ongoing studies are being conducted at field sites at Chalk River Laboratories to identify and characterize the chemical speciation of mobile, long-lived radionuclides migrating in groundwaters. Large-volume water sampling techniques are being utilized to separate and concentrate radionuclides into particular, cationic, anionic, and nonionic chemical forms. Most radionuclides are migrating as soluble, anionic species that appear to be predominantly organoradionuclide complexes. Laboratory studies utilizing anion exchange chromatography have separated several anionically complexed radionuclides, e.g., 60 Co and 106 Ru, into a number of specific compounds or groups of compounds. Further identification of the anionic organoradionuclide complexes is planned utilizing high resolution mass spectrometry. Large-volume ultra-filtration experiments are characterizing the particulate forms of radionuclides being transported in these groundwaters

  5. Sex chromosomes and speciation in Drosophila

    Science.gov (United States)

    Presgraves, Daven C.

    2010-01-01

    Two empirical rules suggest that sex chromosomes play a special role in speciation. The first is Haldane's rule— the preferential sterility and inviability of species hybrids of the heterogametic (XY) sex. The second is the disproportionately large effect of the X chromosome in genetic analyses of hybrid sterility. Whereas the causes of Haldane's rule are well established, the causes of the ‘large X-effect’ have remained controversial. New genetic analyses in Drosophila confirm that the X is a hotspot for hybrid male sterility factors, providing a proximate explanation for the large X-effect. Several other new findings— on faster X evolution, X chromosome meiotic drive, and the regulation of the X chromosome in the male-germline— provide plausible evolutionary explanations for the large X-effect. PMID:18514967

  6. Speciation of actinides in marine waters

    International Nuclear Information System (INIS)

    Roberts, R.A.

    1984-01-01

    The oxidation state distribution of plutonium in seawater, pore water from marine sediments, and a series of model solutions similar to seawater was measured using a TTA solvent extraction technique and α liquid scintillation counting methods. Electromigration was used to compare migration behavior of americium in 0.7M NaCl solutions (pH 6.5 to 8.0) with the behavior calculated from predicted speciation. In all pH 8 solutions studied, Pu(VI) was rapidly reduced to Pu(V). In 0.7M NaCl, pH 8.0, and artifical seawater (no organics), the Pu(V) formed was stable. In real seawater (with organic components), a rapid reduction of Pu(VI) to Pu(IV) was also observed. The Pu(V) formed in seawater was metastable; a very slow reduction to Pu(IV) occurred. This reduction was catalyzed by light. Humic acid (obtained from marine sediments from the Bahama Islands), was added to 0.7M NaCl, pH 8.0 solutions to determine its effect on Pu redox reactions. The effect was similar to the reductions in seawater. Increasing the humic acid concentration decreased the amount of Pu(V) which was formed and favored the IV state. The americium electromigration experiments showed a +0.12 net charge for the Am complexes formed in 0.7M NaCl solutions from pH 7.0 to 8.0. This value was smaller than the charge of +0.94 calculated from predicted speciation

  7. Speech coding

    Energy Technology Data Exchange (ETDEWEB)

    Ravishankar, C., Hughes Network Systems, Germantown, MD

    1998-05-08

    Speech is the predominant means of communication between human beings and since the invention of the telephone by Alexander Graham Bell in 1876, speech services have remained to be the core service in almost all telecommunication systems. Original analog methods of telephony had the disadvantage of speech signal getting corrupted by noise, cross-talk and distortion Long haul transmissions which use repeaters to compensate for the loss in signal strength on transmission links also increase the associated noise and distortion. On the other hand digital transmission is relatively immune to noise, cross-talk and distortion primarily because of the capability to faithfully regenerate digital signal at each repeater purely based on a binary decision. Hence end-to-end performance of the digital link essentially becomes independent of the length and operating frequency bands of the link Hence from a transmission point of view digital transmission has been the preferred approach due to its higher immunity to noise. The need to carry digital speech became extremely important from a service provision point of view as well. Modem requirements have introduced the need for robust, flexible and secure services that can carry a multitude of signal types (such as voice, data and video) without a fundamental change in infrastructure. Such a requirement could not have been easily met without the advent of digital transmission systems, thereby requiring speech to be coded digitally. The term Speech Coding is often referred to techniques that represent or code speech signals either directly as a waveform or as a set of parameters by analyzing the speech signal. In either case, the codes are transmitted to the distant end where speech is reconstructed or synthesized using the received set of codes. A more generic term that is applicable to these techniques that is often interchangeably used with speech coding is the term voice coding. This term is more generic in the sense that the

  8. Diagonal Eigenvalue Unity (DEU) code for spectral amplitude coding-optical code division multiple access

    Science.gov (United States)

    Ahmed, Hassan Yousif; Nisar, K. S.

    2013-08-01

    Code with ideal in-phase cross correlation (CC) and practical code length to support high number of users are required in spectral amplitude coding-optical code division multiple access (SAC-OCDMA) systems. SAC systems are getting more attractive in the field of OCDMA because of its ability to eliminate the influence of multiple access interference (MAI) and also suppress the effect of phase induced intensity noise (PIIN). In this paper, we have proposed new Diagonal Eigenvalue Unity (DEU) code families with ideal in-phase CC based on Jordan block matrix with simple algebraic ways. Four sets of DEU code families based on the code weight W and number of users N for the combination (even, even), (even, odd), (odd, odd) and (odd, even) are constructed. This combination gives DEU code more flexibility in selection of code weight and number of users. These features made this code a compelling candidate for future optical communication systems. Numerical results show that the proposed DEU system outperforms reported codes. In addition, simulation results taken from a commercial optical systems simulator, Virtual Photonic Instrument (VPI™) shown that, using point to multipoint transmission in passive optical network (PON), DEU has better performance and could support long span with high data rate.

  9. Optimal codes as Tanner codes with cyclic component codes

    DEFF Research Database (Denmark)

    Høholdt, Tom; Pinero, Fernando; Zeng, Peng

    2014-01-01

    In this article we study a class of graph codes with cyclic code component codes as affine variety codes. Within this class of Tanner codes we find some optimal binary codes. We use a particular subgraph of the point-line incidence plane of A(2,q) as the Tanner graph, and we are able to describe ...

  10. Aztheca Code

    International Nuclear Information System (INIS)

    Quezada G, S.; Espinosa P, G.; Centeno P, J.; Sanchez M, H.

    2017-09-01

    This paper presents the Aztheca code, which is formed by the mathematical models of neutron kinetics, power generation, heat transfer, core thermo-hydraulics, recirculation systems, dynamic pressure and level models and control system. The Aztheca code is validated with plant data, as well as with predictions from the manufacturer when the reactor operates in a stationary state. On the other hand, to demonstrate that the model is applicable during a transient, an event occurred in a nuclear power plant with a BWR reactor is selected. The plant data are compared with the results obtained with RELAP-5 and the Aztheca model. The results show that both RELAP-5 and the Aztheca code have the ability to adequately predict the behavior of the reactor. (Author)

  11. Version 4. 00 of the MINTEQ geochemical code

    Energy Technology Data Exchange (ETDEWEB)

    Eary, L.E.; Jenne, E.A.

    1992-09-01

    The MINTEQ code is a thermodynamic model that can be used to calculate solution equilibria for geochemical applications. Included in the MINTEQ code are formulations for ionic speciation, ion exchange, adsorption, solubility, redox, gas-phase equilibria, and the dissolution of finite amounts of specified solids. Since the initial development of the MINTEQ geochemical code, a number of undocumented versions of the source code and data files have come into use at the Pacific Northwest Laboratory (PNL). This report documents these changes, describes source code modifications made for the Aquifer Thermal Energy Storage (ATES) program, and provides comprehensive listings of the data files. A version number of 4.00 has been assigned to the MINTEQ source code and the individual data files described in this report.

  12. Version 4.00 of the MINTEQ geochemical code

    Energy Technology Data Exchange (ETDEWEB)

    Eary, L.E.; Jenne, E.A.

    1992-09-01

    The MINTEQ code is a thermodynamic model that can be used to calculate solution equilibria for geochemical applications. Included in the MINTEQ code are formulations for ionic speciation, ion exchange, adsorption, solubility, redox, gas-phase equilibria, and the dissolution of finite amounts of specified solids. Since the initial development of the MINTEQ geochemical code, a number of undocumented versions of the source code and data files have come into use at the Pacific Northwest Laboratory (PNL). This report documents these changes, describes source code modifications made for the Aquifer Thermal Energy Storage (ATES) program, and provides comprehensive listings of the data files. A version number of 4.00 has been assigned to the MINTEQ source code and the individual data files described in this report.

  13. Vocable Code

    DEFF Research Database (Denmark)

    Soon, Winnie; Cox, Geoff

    2018-01-01

    a computational and poetic composition for two screens: on one of these, texts and voices are repeated and disrupted by mathematical chaos, together exploring the performativity of code and language; on the other, is a mix of a computer programming syntax and human language. In this sense queer code can...... be understood as both an object and subject of study that intervenes in the world’s ‘becoming' and how material bodies are produced via human and nonhuman practices. Through mixing the natural and computer language, this article presents a script in six parts from a performative lecture for two persons...

  14. NSURE code

    International Nuclear Information System (INIS)

    Rattan, D.S.

    1993-11-01

    NSURE stands for Near-Surface Repository code. NSURE is a performance assessment code. developed for the safety assessment of near-surface disposal facilities for low-level radioactive waste (LLRW). Part one of this report documents the NSURE model, governing equations and formulation of the mathematical models, and their implementation under the SYVAC3 executive. The NSURE model simulates the release of nuclides from an engineered vault, their subsequent transport via the groundwater and surface water pathways tot he biosphere, and predicts the resulting dose rate to a critical individual. Part two of this report consists of a User's manual, describing simulation procedures, input data preparation, output and example test cases

  15. Numerical simulation of complex multi-dimensional two-phase flows in nuclear power plant coolant circuits by means of the best-estimate thermal-hydraulic code BAGIRA

    International Nuclear Information System (INIS)

    Kalinichenko, S.D.; Kroshilin, A.E.; Kroshilin, V.E.; Smirnov, A.V.

    2009-01-01

    Recent results are exposed, obtained by applying the best-estimate thermal hydraulic code BAGIRA for three-dimensional modeling complex two-phase flow dynamics inside the vessel of the horizontal steam generator PGV-1000 used in reactor units with VVER-1000. Spatial volumetric void fraction and velocity distributions are calculated and compared with available experimental data. (author)

  16. LFSC - Linac Feedback Simulation Code

    Energy Technology Data Exchange (ETDEWEB)

    Ivanov, Valentin; /Fermilab

    2008-05-01

    The computer program LFSC (Code>) is a numerical tool for simulation beam based feedback in high performance linacs. The code LFSC is based on the earlier version developed by a collective of authors at SLAC (L.Hendrickson, R. McEwen, T. Himel, H. Shoaee, S. Shah, P. Emma, P. Schultz) during 1990-2005. That code was successively used in simulation of SLC, TESLA, CLIC and NLC projects. It can simulate as pulse-to-pulse feedback on timescale corresponding to 5-100 Hz, as slower feedbacks, operating in the 0.1-1 Hz range in the Main Linac and Beam Delivery System. The code LFSC is running under Matlab for MS Windows operating system. It contains about 30,000 lines of source code in more than 260 subroutines. The code uses the LIAR ('Linear Accelerator Research code') for particle tracking under ground motion and technical noise perturbations. It uses the Guinea Pig code to simulate the luminosity performance. A set of input files includes the lattice description (XSIF format), and plane text files with numerical parameters, wake fields, ground motion data etc. The Matlab environment provides a flexible system for graphical output.

  17. saosakwe@yahoo.com Chemical Speciation and Mobility of Some

    African Journals Online (AJOL)

    Michael Horsfall

    ABSTRACT: The mobility of some heavy metals (Fe, Co, Ni and Mn) in soils around ... Sampling and Analysis: Soil samples were collected ..... Speciation Studies of trace elements levels in .... Characterization of Radioactive Particles in the.

  18. Pb Speciation Data to Estimate Lead Bioavailability to Quail

    Data.gov (United States)

    U.S. Environmental Protection Agency — Linear combination fitting data for lead speciation of soil samples evaluated through an in-vivo/in-vitro correlation for quail exposure. This dataset is associated...

  19. Speciation of arsenic and mercury in feed: why and how?

    DEFF Research Database (Denmark)

    Hedegaard, Rikke Susanne Vingborg; Sloth, Jens Jørgen

    2011-01-01

    The understanding of the mechanisms of biological activities and biotransformation of trace elements such as arsenic and mercury has improved during recent years with the help of chemical speciation studies. However, the most important practical application of elemental speciation is in the area ...... in feed as well as initiatives for the establishment of standardized methods for determination of inorganic arsenic and methylmercury are presented.......The understanding of the mechanisms of biological activities and biotransformation of trace elements such as arsenic and mercury has improved during recent years with the help of chemical speciation studies. However, the most important practical application of elemental speciation is in the area...... of toxicology. Toxicological knowledge on the individual trace element species can lead to more specific legislation of hazardous substances found in feed. Examples here are arsenic, where the inorganic forms are the most toxic, and mercury, where the organic form methylmercury is more toxic than inorganic...

  20. Speciation and Persistence of Dimethoate in the Aquatic Environment

    African Journals Online (AJOL)

    Speciation and Persistence of Dimethoate in the Aquatic Environment: Characterization in Terms of a Rate Model that Takes Into Account Hydrolysis, Photolysis, Microbial Degradation and Adsorption of the Pesticide by Colloidal and Sediment Particles.

  1. Speciation and internal dosimetry: from chemical species to dosimetric models

    International Nuclear Information System (INIS)

    Paquet, F.; Frelon, S.; Cote, G.; Madic, C.

    2004-01-01

    Speciation studies refer to the distribution of species in a particular sample or matrix. These studies are necessary to improve the description, understanding and prediction of trace element kinetics and toxicity. In case of internal contamination with radionuclides, speciation studies could help to improve both the biokinetic and dosimetric models for radionuclides. There are different methods to approach the speciation of radionuclide in a biological system, depending on the degree of accuracy needed and the level of uncertainties accepted. Among them, computer modelling and experimental determination are complementary approaches. This paper describes what is known about speciation of actinides in blood, GI-tract, liver and skeleton and of their consequences in terms of internal dosimetry. The conclusion is that such studies provide very valuable data and should be targeted in the future on some specific tissues and biomolecules. (authors)

  2. The contribution of chemical speciation to internal dosimetry

    International Nuclear Information System (INIS)

    Paquet, F.; Frelon, S.; Cote, G.; Madic, C.

    2003-01-01

    Speciation studies refer to the distribution of species in a particular sample or matrix. These studies are necessary to improve the description, understanding and prediction of trace element kinetics and toxicity. In the case of internal contamination with radionuclides, speciation studies could help to improve both the biokinetic and dosimetric models for radionuclides. There are different methods to approach the speciation of radionuclides in a biological system, depending on the degree of accuracy needed and the level of uncertainties accepted. Among them, computer modelling and experimental determination are complementary approaches. This paper describes what is known about speciation of actinides in blood, GI tract, liver and skeleton and of their consequences in terms of internal dosimetry. The conclusion is that such studies provide very valuable data and should be targeted in the future on some specific tissues and biomolecules. (author)

  3. Genomic support for speciation and specificity of baculoviruses

    NARCIS (Netherlands)

    Jakubowska, A.K.

    2010-01-01

    Keywords: baculovirus, insects, speciation, genomics, phylogeny, host specificity

    The Baculoviridae comprise a large family of double-stranded DNA viruses infecting
    arthropods. In this thesis two baculoviruses, Leucoma salicis nucleopolyhedrovirus
    (LesaNPV) and Agrotis

  4. Speciation of long-lived radionuclides in the environment

    Energy Technology Data Exchange (ETDEWEB)

    Xiaolin Hou

    2008-11-15

    This project started in November 2005 and ended in November 2008, the work and research approaches are summarized in this report. This project studied the speciation of radionuclides in environment. A number of speciation analytical methods are developed for determination of species of 129I, 99Tc, isotopes of Pu, and 237Np in seawater, fresh water, soil, sediment, vegetations, and concrete. The developed methods are used for the investigation of the chemical speciation of these radionuclides as well as their environmental behaviours, especially in Danish environment. In addition the speciation of Pu isotopes in waste samples from the decommissioning of Danish nuclear facilities is also investigated. The report summarizes these works completed in this project. Through this research project, a number of research papers have been published in the scientific journals, the research results has also been presented in the Nordic and international conference/meeting and communicated to international colleagues. Some publications are also enclosed to this report. (au)

  5. Chemical speciation of long-lived radionuclides in the environment

    International Nuclear Information System (INIS)

    Xiaolin Hou

    2008-11-01

    This project started in November 2005 and ended in November 2008, the work and research approaches are summarized in this report. This project studied the speciation of radionuclides in environment. A number of speciation analytical methods are developed for determination of species of 129 I, 99 Tc, isotopes of Pu, and 237 Np in seawater, fresh water, soil, sediment, vegetations, and concrete. The developed methods are used for the investigation of the chemical speciation of these radionuclides as well as their environmental behaviours, especially in Danish environment. In addition the speciation of Pu isotopes in waste samples from the decommissioning of Danish nuclear facilities is also investigated. The report summarizes these works completed in this project. Through this research project, a number of research papers have been published in the scientific journals, the research results has also been presented in the Nordic and international conference/meeting and communicated to international colleagues. Some publications are also enclosed to this report. (au)

  6. Numerical analysis

    CERN Document Server

    Brezinski, C

    2012-01-01

    Numerical analysis has witnessed many significant developments in the 20th century. This book brings together 16 papers dealing with historical developments, survey papers and papers on recent trends in selected areas of numerical analysis, such as: approximation and interpolation, solution of linear systems and eigenvalue problems, iterative methods, quadrature rules, solution of ordinary-, partial- and integral equations. The papers are reprinted from the 7-volume project of the Journal of Computational and Applied Mathematics on '/homepage/sac/cam/na2000/index.html<

  7. The reality and importance of founder speciation in evolution.

    Science.gov (United States)

    Templeton, Alan R

    2008-05-01

    A founder event occurs when a new population is established from a small number of individuals drawn from a large ancestral population. Mayr proposed that genetic drift in an isolated founder population could alter the selective forces in an epistatic system, an observation supported by recent studies. Carson argued that a period of relaxed selection could occur when a founder population is in an open ecological niche, allowing rapid population growth after the founder event. Selectable genetic variation can actually increase during this founder-flush phase due to recombination, enhanced survival of advantageous mutations, and the conversion of non-additive genetic variance into additive variance in an epistatic system, another empirically confirmed prediction. Templeton combined the theories of Mayr and Carson with population genetic models to predict the conditions under which founder events can contribute to speciation, and these predictions are strongly confirmed by the empirical literature. Much of the criticism of founder speciation is based upon equating founder speciation to an adaptive peak shift opposed by selection. However, Mayr, Carson and Templeton all modeled a positive interaction of selection and drift, and Templeton showed that founder speciation is incompatible with peak-shift conditions. Although rare, founder speciation can have a disproportionate importance in adaptive innovation and radiation, and examples are given to show that "rare" does not mean "unimportant" in evolution. Founder speciation also interacts with other speciation mechanisms such that a speciation event is not a one-dimensional process due to either selection alone or drift alone. (c) 2008 Wiley Periodicals, Inc.

  8. Electrochemical metal speciation in natural and model polyelectrolyte systems

    OpenAIRE

    Hoop, van den, M.A.G.T.

    1994-01-01

    The purpose of the research described in this thesis was to examine the applicability of electro-analytical techniques in obtaining information on the speciation of metals, i.e. their distribution over different physico-chemical forms, in aquatic systems containing charged macromolecules. In chapter 1 a general introduction is given to (i) metal speciation in aquatic systems, (ii) (bio)polyelectrolytes and their counterion distributions and (iii) electrochemical ...

  9. How humans drive speciation as well as extinction

    DEFF Research Database (Denmark)

    Bull, Joseph William; Maron, M.

    2016-01-01

    influence upon divergence in microorganisms. Even if human activities resulted in no net loss of species diversity by balancing speciation and extinction rates, this would probably be deemed unacceptable. We discuss why, based upon ‘no net loss’ conservation literature— considering phylogenetic diversity...... and other metrics, risk aversion, taboo trade-offs and spatial heterogeneity. We conclude that evaluating speciation alongside extinction could result in more nuanced understanding of biosphere trends, clarifying what it is we actually value about biodiversity....

  10. LUCID - an optical design and raytrace code

    International Nuclear Information System (INIS)

    Nicholas, D.J.; Duffey, K.P.

    1980-11-01

    A 2D optical design and ray trace code is described. The code can operate either as a geometric optics propagation code or provide a scalar diffraction treatment. There are numerous non-standard options within the code including design and systems optimisation procedures. A number of illustrative problems relating to the design of optical components in the field of high power lasers is included. (author)

  11. The Aster code; Code Aster

    Energy Technology Data Exchange (ETDEWEB)

    Delbecq, J.M

    1999-07-01

    The Aster code is a 2D or 3D finite-element calculation code for structures developed by the R and D direction of Electricite de France (EdF). This dossier presents a complete overview of the characteristics and uses of the Aster code: introduction of version 4; the context of Aster (organisation of the code development, versions, systems and interfaces, development tools, quality assurance, independent validation); static mechanics (linear thermo-elasticity, Euler buckling, cables, Zarka-Casier method); non-linear mechanics (materials behaviour, big deformations, specific loads, unloading and loss of load proportionality indicators, global algorithm, contact and friction); rupture mechanics (G energy restitution level, restitution level in thermo-elasto-plasticity, 3D local energy restitution level, KI and KII stress intensity factors, calculation of limit loads for structures), specific treatments (fatigue, rupture, wear, error estimation); meshes and models (mesh generation, modeling, loads and boundary conditions, links between different modeling processes, resolution of linear systems, display of results etc..); vibration mechanics (modal and harmonic analysis, dynamics with shocks, direct transient dynamics, seismic analysis and aleatory dynamics, non-linear dynamics, dynamical sub-structuring); fluid-structure interactions (internal acoustics, mass, rigidity and damping); linear and non-linear thermal analysis; steels and metal industry (structure transformations); coupled problems (internal chaining, internal thermo-hydro-mechanical coupling, chaining with other codes); products and services. (J.S.)

  12. Development and implementation of a set of numerical quadratures SQ{sub N} and EQ{sub N} type in the transport code AZTRAN; Desarrollo e implementacion de un conjunto de cuadraturas numericas de tipo SQ{sub N} y EQ{sub N} en el codigo de transporte AZTRAN

    Energy Technology Data Exchange (ETDEWEB)

    Chepe P, M. [Universidad Autonoma Metropolitana, Unidad Iztapalapa, San Rafael Atlixco 186, Col. Vicentina, 09340 Ciudad de Mexico (Mexico); Xolocostli M, J. V.; Gomez T, A. M. [ININ, Carretera Mexico-Toluca s/n, 52750 Ocoyoacac, Estado de Mexico (Mexico); Del Valle G, E., E-mail: liaison.web@gmail.com [IPN, Escuela Superior de Fisica y Matematicas, Av. IPN s/n, Col. Lindavista, 07738 Ciudad de Mexico (Mexico)

    2015-09-15

    The deterministic transport codes for analysis of nuclear reactors have been used for several years already, these codes have evolved in terms of the methodology used and the degree of accuracy, because at the present time has more computer power. In this paper, the transport code used considers the classical technique of multi-group for discretization energy, for space discretization uses the nodal methods, while for the angular discretization the discrete ordinates method is used; so that presents the development and implementation of a set of numerical quadratures of SQ{sub N} type symmetrical with the same weight for each angular direction and these are compared with the quadratures of EQ{sub N} type. The two sets of numerical quadratures were implemented in the program AZTRAN to a problem with isotropic medium in XYZ geometry, in steady state using the nodal method RTN-0 (Raviart-Thomas-Nedelec). The analyzed results correspond to the effective multiplication factor k{sub eff} and neutron angular flux with approximations from S{sub 4} to S{sub 16}. (Author)

  13. Coding Class

    DEFF Research Database (Denmark)

    Ejsing-Duun, Stine; Hansbøl, Mikala

    Denne rapport rummer evaluering og dokumentation af Coding Class projektet1. Coding Class projektet blev igangsat i skoleåret 2016/2017 af IT-Branchen i samarbejde med en række medlemsvirksomheder, Københavns kommune, Vejle Kommune, Styrelsen for IT- og Læring (STIL) og den frivillige forening...... Coding Pirates2. Rapporten er forfattet af Docent i digitale læringsressourcer og forskningskoordinator for forsknings- og udviklingsmiljøet Digitalisering i Skolen (DiS), Mikala Hansbøl, fra Institut for Skole og Læring ved Professionshøjskolen Metropol; og Lektor i læringsteknologi, interaktionsdesign......, design tænkning og design-pædagogik, Stine Ejsing-Duun fra Forskningslab: It og Læringsdesign (ILD-LAB) ved Institut for kommunikation og psykologi, Aalborg Universitet i København. Vi har fulgt og gennemført evaluering og dokumentation af Coding Class projektet i perioden november 2016 til maj 2017...

  14. Uplink Coding

    Science.gov (United States)

    Andrews, Ken; Divsalar, Dariush; Dolinar, Sam; Moision, Bruce; Hamkins, Jon; Pollara, Fabrizio

    2007-01-01

    This slide presentation reviews the objectives, meeting goals and overall NASA goals for the NASA Data Standards Working Group. The presentation includes information on the technical progress surrounding the objective, short LDPC codes, and the general results on the Pu-Pw tradeoff.

  15. ANIMAL code

    International Nuclear Information System (INIS)

    Lindemuth, I.R.

    1979-01-01

    This report describes ANIMAL, a two-dimensional Eulerian magnetohydrodynamic computer code. ANIMAL's physical model also appears. Formulated are temporal and spatial finite-difference equations in a manner that facilitates implementation of the algorithm. Outlined are the functions of the algorithm's FORTRAN subroutines and variables

  16. Network Coding

    Indian Academy of Sciences (India)

    Home; Journals; Resonance – Journal of Science Education; Volume 15; Issue 7. Network Coding. K V Rashmi Nihar B Shah P Vijay Kumar. General Article Volume 15 Issue 7 July 2010 pp 604-621. Fulltext. Click here to view fulltext PDF. Permanent link: https://www.ias.ac.in/article/fulltext/reso/015/07/0604-0621 ...

  17. MCNP code

    International Nuclear Information System (INIS)

    Cramer, S.N.

    1984-01-01

    The MCNP code is the major Monte Carlo coupled neutron-photon transport research tool at the Los Alamos National Laboratory, and it represents the most extensive Monte Carlo development program in the United States which is available in the public domain. The present code is the direct descendent of the original Monte Carlo work of Fermi, von Neumaum, and Ulam at Los Alamos in the 1940s. Development has continued uninterrupted since that time, and the current version of MCNP (or its predecessors) has always included state-of-the-art methods in the Monte Carlo simulation of radiation transport, basic cross section data, geometry capability, variance reduction, and estimation procedures. The authors of the present code have oriented its development toward general user application. The documentation, though extensive, is presented in a clear and simple manner with many examples, illustrations, and sample problems. In addition to providing the desired results, the output listings give a a wealth of detailed information (some optional) concerning each state of the calculation. The code system is continually updated to take advantage of advances in computer hardware and software, including interactive modes of operation, diagnostic interrupts and restarts, and a variety of graphical and video aids

  18. Expander Codes

    Indian Academy of Sciences (India)

    Home; Journals; Resonance – Journal of Science Education; Volume 10; Issue 1. Expander Codes - The Sipser–Spielman Construction. Priti Shankar. General Article Volume 10 ... Author Affiliations. Priti Shankar1. Department of Computer Science and Automation, Indian Institute of Science Bangalore 560 012, India.

  19. Self-consistent approach for neutral community models with speciation

    Science.gov (United States)

    Haegeman, Bart; Etienne, Rampal S.

    2010-03-01

    Hubbell’s neutral model provides a rich theoretical framework to study ecological communities. By incorporating both ecological and evolutionary time scales, it allows us to investigate how communities are shaped by speciation processes. The speciation model in the basic neutral model is particularly simple, describing speciation as a point-mutation event in a birth of a single individual. The stationary species abundance distribution of the basic model, which can be solved exactly, fits empirical data of distributions of species’ abundances surprisingly well. More realistic speciation models have been proposed such as the random-fission model in which new species appear by splitting up existing species. However, no analytical solution is available for these models, impeding quantitative comparison with data. Here, we present a self-consistent approximation method for neutral community models with various speciation modes, including random fission. We derive explicit formulas for the stationary species abundance distribution, which agree very well with simulations. We expect that our approximation method will be useful to study other speciation processes in neutral community models as well.

  20. Numerical Relativity

    Science.gov (United States)

    Baker, John G.

    2009-01-01

    Recent advances in numerical relativity have fueled an explosion of progress in understanding the predictions of Einstein's theory of gravity, General Relativity, for the strong field dynamics, the gravitational radiation wave forms, and consequently the state of the remnant produced from the merger of compact binary objects. I will review recent results from the field, focusing on mergers of two black holes.

  1. Numerical Electromagnetic Code (NEC)-Basic Scattering Code. Part 2. Code Manual

    Science.gov (United States)

    1979-09-01

    imaging of source axes for magnetic source. Ax R VSOURC(1,1) + 9 VSOURC(1,2) + T VSOURC(1,3) 4pi = x VIMAG(I,1) + ^ VINAG (1,2)+ VIMAG(l,3) An =unit...VNC A. yt and z components of the end cap unit normal OUTPUT VARIABLE VINAG X.. Y, and z components defining thesource image coordinate system axesin

  2. Bayesian calibration of thermodynamic parameters for geochemical speciation modeling of cementitious materials

    International Nuclear Information System (INIS)

    Sarkar, S.; Kosson, D.S.; Mahadevan, S.; Meeussen, J.C.L.; Sloot, H. van der; Arnold, J.R.; Brown, K.G.

    2012-01-01

    Chemical equilibrium modeling of cementitious materials requires aqueous–solid equilibrium constants of the controlling mineral phases (K sp ) and the available concentrations of primary components. Inherent randomness of the input and model parameters, experimental measurement error, the assumptions and approximations required for numerical simulation, and inadequate knowledge of the chemical process contribute to uncertainty in model prediction. A numerical simulation framework is developed in this paper to assess uncertainty in K sp values used in geochemical speciation models. A Bayesian statistical method is used in combination with an efficient, adaptive Metropolis sampling technique to develop probability density functions for K sp values. One set of leaching experimental observations is used for calibration and another set is used for comparison to evaluate the applicability of the approach. The estimated probability distributions of K sp values can be used in Monte Carlo simulation to assess uncertainty in the behavior of aqueous–solid partitioning of constituents in cement-based materials.

  3. Estimation of Speciation and Distribution of {sup 131}I in urban and natural Environments

    Energy Technology Data Exchange (ETDEWEB)

    Hormann, Volker; Fischer, Helmut W. [University of Bremen, Institute of Environmental Physics, Otto-Hahn-Allee 1, 28359 Bremen (Germany)

    2014-07-01

    {sup 131}I is a radionuclide that may be introduced into natural and urban environments via several pathways. As a result of nuclear accidents it may be washed out from air or settle onto the ground by dry deposition. In urban landscapes this is again washed out by rain, partly introduced into the sewer system and thus transported to the next wastewater plant where it may accumulate in certain compartments. In rural landscapes it may penetrate the soil and be more or less available to plant uptake depending on chemical and physical conditions. On a regular basis, {sup 131}I is released into the urban sewer system in the course of therapeutic and diagnostic treatment of patients with thyroid diseases. The speciation of iodine in the environment is complex. Depending on redox state and biological activity, it may appear as I{sup -}, IO{sub 3}{sup -}, I{sub 2} or bound to organic molecules (e.g. humic acids). Moreover, some of these species are bound to surfaces of particles suspended in water or present in soil, e.g. hydrous ferric oxides (HFO). It is to be expected that speciation and solid-liquid distribution of iodine strongly depends on environmental conditions. In this study, the speciation and solid-liquid distribution of iodine in environmental samples such as waste water, sewage sludge and soil are estimated with the help of the geochemical code PHREEQC. The calculations are carried out using chemical equilibrium and sorption data from the literature and chemical analyses of the media. We present the results of these calculations and compare them with experimental results of medical {sup 131}I in waste water and sewage sludge. The output of this study will be used in future work where transport and distribution of iodine in wastewater treatment plants and in irrigated agricultural soils will be modeled. (authors)

  4. Whole-genome analyses of speciation events in pathogenic Brucellae

    Energy Technology Data Exchange (ETDEWEB)

    Chain, Patrick S. G. [Lawrence Livermore National Laboratory (LLNL); Comerci, Diego J. [Universidad Nacional de General San Martin; Tolmasky, Marcelo E. [California State University; Larimer, Frank W [ORNL; Malfatti, Stephanie [Lawrence Livermore National Laboratory (LLNL); Vergez, Lisa [Lawrence Livermore National Laboratory (LLNL); Aguero, Fernan [Universidad Nacional de General San Martin; Land, Miriam L [ORNL; Ugalde, Rodolfo A. [Universidad Nacional de General San Martin; Garcia, Emilio [Lawrence Livermore National Laboratory (LLNL)

    2005-12-01

    Despite their high DNA identity and a proposal to group classical Brucella species as biovars of Brucella melitensis, the commonly recognized Brucella species can be distinguished by distinct biochemical and fatty acid characters, as well as by a marked host range (e.g., Brucella suis for swine, B. melitensis for sheep and goats, and Brucella abortus for cattle). Here we present the genome of B. abortus 2308, the virulent prototype biovar 1 strain, and its comparison to the two other human pathogenic Brucella species and to B. abortus field isolate 9-941. The global distribution of pseudogenes, deletions, and insertions supports previous indications that B. abortus and B. melitensis share a common ancestor that diverged from B. suis. With the exception of a dozen genes, the genetic complements of both B. abortus strains are identical, whereas the three species differ in gene content and pseudogenes. The pattern of species-specific gene inactivations affecting transcriptional regulators and outer membrane proteins suggests that these inactivations may play an important role in the establishment of host specificity and may have been a primary driver of speciation in the genus Brucella. Despite being nonmotile, the brucellae contain flagellum gene clusters and display species-specific flagellar gene inactivations, which lead to the putative generation of different versions of flagellum-derived structures and may contribute to differences in host specificity and virulence. Metabolic changes such as the lack of complete metabolic pathways for the synthesis of numerous compounds (e.g., glycogen, biotin, NAD, and choline) are consistent with adaptation of brucellae to an intracellular life-style.

  5. Evolutionary pets: offspring numbers reveal speciation process in domesticated chickens.

    Directory of Open Access Journals (Sweden)

    Inga Tiemann

    Full Text Available Since Darwin, the nature of the relationship between evolution and domestication has been debated. Evolution offers different mechanisms of selection that lead to adaptation and may end in the origin of new species as defined by the biological species concept. Domestication has given rise to numerous breeds in almost every domesticated species, including chickens. At the same time, so-called artificial selection seems to exclude mechanisms of sexual selection by the animals themselves. We want to forward the question to the animal itself: With whom do you reproduce successfully? This study focused on the sexual behavior of the domestic chicken Gallus gallus f.dom., particularly the White Crested Polish breed. Experiments on mate choice and the observation of fertilization and hatching rates of mixed-breeding groups revealed breed-specific preferences. In breeding groups containing White Crested Polish and a comparative breed, more purebred chicks hatched than hybrids (number of eggs collected: 1059. Mating was possible in equal shares, but in relation to the number of eggs collected, purebred offspring (62.75% ± 7.10%, M ± SE hatched to a greater extend compared to hybrid offspring (28.75% ± 15.32%, M ± SE. These data demonstrate that the mechanism of sexual selection is still present in domestic chicken breeds, which includes the alteration of gene frequencies typical for domestication and evolutionary speciation. Due to selection and mate choice we state that breeding in principle can generate new species. Therefore, we see domestication as an evolutionary process that integrates human interests of animal breeding with innate mate choice by the animal.

  6. Neural Decoder for Topological Codes

    Science.gov (United States)

    Torlai, Giacomo; Melko, Roger G.

    2017-07-01

    We present an algorithm for error correction in topological codes that exploits modern machine learning techniques. Our decoder is constructed from a stochastic neural network called a Boltzmann machine, of the type extensively used in deep learning. We provide a general prescription for the training of the network and a decoding strategy that is applicable to a wide variety of stabilizer codes with very little specialization. We demonstrate the neural decoder numerically on the well-known two-dimensional toric code with phase-flip errors.

  7. Uranium Speciation and Bioavailability in Aquatic Systems: An Overview

    Directory of Open Access Journals (Sweden)

    Scott J. Markich

    2002-01-01

    Full Text Available The speciation of uranium (U in relation to its bioavailability is reviewed for surface waters (fresh- and seawater and their sediments. A summary of available analytical and modeling techniques for determining U speciation is also presented. U(VI is the major form of U in oxic surface waters, while U(IV is the major form in anoxic waters. The bioavailability of U (i.e., its ability to bind to or traverse the cell surface of an organism is dependent on its speciation, or physicochemical form. U occurs in surface waters in a variety of physicochemical forms, including the free metal ion (U4+ or UO22+ and complexes with inorganic ligands (e.g., uranyl carbonate or uranyl phosphate, and humic substances (HS (e.g., uranyl fulvate in dissolved, colloidal, and/or particulate forms. Although the relationship between U speciation and bioavailability is complex, there is reasonable evidence to indicate that UO22+ and UO2OH+ are the major forms of U(VI available to organisms, rather than U in strong complexes (e.g., uranyl fulvate or adsorbed to colloidal and/or particulate matter. U(VI complexes with inorganic ligands (e.g., carbonate or phosphate and HS apparently reduce the bioavailability of U by reducing the activity of UO22+ and UO2OH+. The majority of studies have used the results from thermodynamic speciation modeling to support these conclusions. Time-resolved laser-induced fluorescence spectroscopy is the only analytical technique able to directly determine specific U species, but is limited in use to freshwaters of low pH and ionic strength. Nearly all of the available information relating the speciation of U to its bioavailability has been derived using simple, chemically defined experimental freshwaters, rather than natural waters. No data are available for estuarine or seawater. Furthermore, there are no available data on the relationship between U speciation and bioavailability in sediments. An understanding of this relationship has been

  8. Panda code

    International Nuclear Information System (INIS)

    Altomare, S.; Minton, G.

    1975-02-01

    PANDA is a new two-group one-dimensional (slab/cylinder) neutron diffusion code designed to replace and extend the FAB series. PANDA allows for the nonlinear effects of xenon, enthalpy and Doppler. Fuel depletion is allowed. PANDA has a completely general search facility which will seek criticality, maximize reactivity, or minimize peaking. Any single parameter may be varied in a search. PANDA is written in FORTRAN IV, and as such is nearly machine independent. However, PANDA has been written with the present limitations of the Westinghouse CDC-6600 system in mind. Most computation loops are very short, and the code is less than half the useful 6600 memory size so that two jobs can reside in the core at once. (auth)

  9. Numerical relativity

    CERN Document Server

    Nakamura, T

    1993-01-01

    In GR13 we heard many reports on recent. progress as well as future plans of detection of gravitational waves. According to these reports (see the report of the workshop on the detection of gravitational waves by Paik in this volume), it is highly probable that the sensitivity of detectors such as laser interferometers and ultra low temperature resonant bars will reach the level of h ~ 10—21 by 1998. in this level we may expect the detection of the gravitational waves from astrophysical sources such as coalescing binary neutron stars once a year or so. Therefore the progress in numerical relativity is urgently required to predict the wave pattern and amplitude of the gravitational waves from realistic astrophysical sources. The time left for numerical relativists is only six years or so although there are so many difficulties in principle as well as in practice.

  10. Numerical model CCC

    International Nuclear Information System (INIS)

    Bodvarsson, G.S.; Lippmann, M.J.

    1980-01-01

    The computer program CCC (conduction-convection-consolidation), developed at Lawrence Berkeley Laboratory, solves numerically the heat and mass flow equations for a fully saturated medium, and computes one-dimensional consolidation of the simulated systems. The model employs the Integrated Finite Difference Method (IFDM) in discretizing the saturated medium and formulating the governing equations. The sets of equations are solved either by an iterative solution technique (old version) or an efficient sparse solver (new version). The deformation of the medium is calculated using the one-dimensional consolidation theory of Terzaghi. In this paper, the numerical code is described, validation examples given and areas of application discussed. Several example problems involving flow through fractured media are also presented

  11. Numerical simulation in astrophysics

    International Nuclear Information System (INIS)

    Miyama, Shoken

    1985-01-01

    There have been many numerical simulations of hydrodynamical problems in astrophysics, e.g. processes of star formation, supernova explosion and formation of neutron stars, and general relativistic collapse of star to form black hole. The codes are made to be suitable for computing such problems. In astrophysical hydrodynamical problems, there are the characteristics: problems of self-gravity or external gravity acting, objects of scales very large or very short, objects changing by short period or long time scale, problems of magnetic force and/or centrifugal force acting. In this paper, we present one of methods of numerical simulations which may satisfy these requirements, so-called smoothed particle methods. We then introduce the methods briefly. Then, we show one of the applications of the methods to astrophysical problem (fragmentation and collapse of rotating isothermal cloud). (Mori, K.)

  12. CANAL code

    International Nuclear Information System (INIS)

    Gara, P.; Martin, E.

    1983-01-01

    The CANAL code presented here optimizes a realistic iron free extraction channel which has to provide a given transversal magnetic field law in the median plane: the current bars may be curved, have finite lengths and cooling ducts and move in a restricted transversal area; terminal connectors may be added, images of the bars in pole pieces may be included. A special option optimizes a real set of circular coils [fr

  13. LFSC - Linac Feedback Simulation Code

    International Nuclear Information System (INIS)

    Ivanov, Valentin; Fermilab

    2008-01-01

    The computer program LFSC ( ) is a numerical tool for simulation beam based feedback in high performance linacs. The code LFSC is based on the earlier version developed by a collective of authors at SLAC (L.Hendrickson, R. McEwen, T. Himel, H. Shoaee, S. Shah, P. Emma, P. Schultz) during 1990-2005. That code was successively used in simulation of SLC, TESLA, CLIC and NLC projects. It can simulate as pulse-to-pulse feedback on timescale corresponding to 5-100 Hz, as slower feedbacks, operating in the 0.1-1 Hz range in the Main Linac and Beam Delivery System. The code LFSC is running under Matlab for MS Windows operating system. It contains about 30,000 lines of source code in more than 260 subroutines. The code uses the LIAR ('Linear Accelerator Research code') for particle tracking under ground motion and technical noise perturbations. It uses the Guinea Pig code to simulate the luminosity performance. A set of input files includes the lattice description (XSIF format), and plane text files with numerical parameters, wake fields, ground motion data etc. The Matlab environment provides a flexible system for graphical output

  14. (Almost) practical tree codes

    KAUST Repository

    Khina, Anatoly

    2016-08-15

    We consider the problem of stabilizing an unstable plant driven by bounded noise over a digital noisy communication link, a scenario at the heart of networked control. To stabilize such a plant, one needs real-time encoding and decoding with an error probability profile that decays exponentially with the decoding delay. The works of Schulman and Sahai over the past two decades have developed the notions of tree codes and anytime capacity, and provided the theoretical framework for studying such problems. Nonetheless, there has been little practical progress in this area due to the absence of explicit constructions of tree codes with efficient encoding and decoding algorithms. Recently, linear time-invariant tree codes were proposed to achieve the desired result under maximum-likelihood decoding. In this work, we take one more step towards practicality, by showing that these codes can be efficiently decoded using sequential decoding algorithms, up to some loss in performance (and with some practical complexity caveats). We supplement our theoretical results with numerical simulations that demonstrate the effectiveness of the decoder in a control system setting.

  15. Behavioural divergence, interfertility and speciation: a review.

    Science.gov (United States)

    Pillay, Neville; Rymer, Tasmin L

    2012-11-01

    Behavioural compatibility between mates is fundamental for maintaining species boundaries and is achieved through appropriate communication between males and females. A breakdown in communication will lead to behavioural divergence and reduced interfertility. In this review, we summarise the current knowledge on male signals and female perception of these signals, integrating the literature from several taxa. We advocate that signaller-perceiver coevolution, which is usually under strong stabilising selection to enable mating, forms the basis of species-specific mate recognition systems. The mechanisms (phylogeny, geography, ecology, biology) shaping signaller-perceiver systems are briefly discussed to demonstrate the factors underpinning the evolution of signaller-perceiver couplings. Since divergence and diversification of communication systems is driven by changes in the mechanical properties of sensory pathways and morphology of sensory organs, we highlight signal modalities (auditory, olfactory, visual, tactile) and their importance in communication, particularly in mate selection. Next, using available examples and generating a stylised model, we suggest how disruption (biological, ecological, stochastic) of signaller-perceiver systems drives behavioural divergence and consequently results in reduced interfertility and speciation. Future studies should adopt an integrative approach, combining multiple parameters (phylogeny, adaptive utility of communication systems, genetics and biomechanical/biochemical properties of signals and perception) to explore how disruption of signaller-perceiver systems results in behavioural divergence and reduced interfertility. Finally, we question the impact that rapid environmental change will have on disruption of communication systems, potentially interfering with signaller-perceiver couplings. Copyright © 2012 Elsevier B.V. All rights reserved.

  16. Molecular activation analysis for chemical speciation studies

    International Nuclear Information System (INIS)

    Chai-Chifang

    1998-01-01

    The term of Molecular Activation Analysis (MAA) refers to an activation analysis method that is able to provide information about the chemical species of elements in system of interests, though its definition has remained to be assigned. Its development is strongly stimulated by the urgent need to know the chemical species of elements, because the total concentrations are often without any meaning when assessing health or environmental risks of trace elements.In practice, the MAA is a combination of conventional instrumental or radiochemical activation analysis and physical, chemical or biochemical separation techniques. The MAA is able to play a particular role in speciation studies. However, the critical point in the MAA is that it is not permitted to change the primitive chemical species of elements in systems, or the change has to be under control; in the meantime it is not allowed to form the 'new artifact' originally not present in systems. Some practical examples of MAA for chemical species research performed recently in our laboratory will be presented as follows: Chemical species of platinum group elements in sediment; Chemical species of iodine in marine algae; Chemical species of mercury in human tissues; Chemical species of selenium in corn; Chemical species of rare earth elements in natural plant, etc. The merits and limitations of MAA will be described as well. (author)

  17. The use of geochemical speciation modelling to predict the impact of uranium to freshwater biota

    International Nuclear Information System (INIS)

    Markich, S.J.; Brown, P.L.; Jeffree, R.A.

    1996-01-01

    Uranium is the prime potential contaminant in mine waste waters that may be released from the Ranger Uranium Mine (RUM) into the receiving waters of the Magela Creek, Alligator Rivers Region, Northern Australia. The potential ecological impact of the migration of uranium, that would result from an elevation in its concentration above background, in the Magela Creek downstream of the RUM, has been experimentally investigated by integrating biomonitoring with geochemical speciation modelling. The freshwater bivalve Velesunio angasi, abundant throughout the Magela Creek catchment, was exposed to a variety of uranium concentrations in a synthetic Magela Creek water, at four pH levels (5.0, 5.3, 5.5 and 6.0), in the presence (3.05 and 7.50 mg l -1 ) and absence of a model fulvic acid (FA), and its behavioural response was measured. Speciation modelling, using the HARPHRQ code, provided evidence that UO 2+ 2 and UO 2 OH + are the uranium species most responsible (ca. 96%) for eliciting an adverse behavioural response when UO 2+ 2 is assigned twice the toxic effect of UO 2 OH + . This finding rejects the notion that biota respond specifically to the sum total of inorganic uranyl species. (orig.)

  18. Micronutrient metal speciation is controlled by competitive organic chelation in grassland soils

    Energy Technology Data Exchange (ETDEWEB)

    Boiteau, Rene M.; Shaw, Jared B.; Pasa Tolic, Ljiljana; Koppenaal, David W.; Jansson, Janet K.

    2018-05-01

    Many elements are scarcely soluble in aqueous conditions found in high pH environments, such as calcareous grassland soils, unless complexed to strong binding organic ligands. To overcome this limitation, some plants and microbes produce chelators that solubilize micronutrient metals such as Fe, Ni, Cu, and Zn from mineral phases. These complexes are taken up by organisms via specific membrane receptors, thereby differentially impacting the bioavailability of these metals to the plant and microbial community. Although the importance of these chelation strategies for individual organisms has been well established, little is known about which pathways coexist within rhizosphere microbiomes or how they interact and compete for metal binding. Identifying these metallo-organic species within natural ecosystems has remained a formidable analytical challenge due to the vast diversity of compounds and poorly defined metabolic processes in complex soil matrix. Herein, we employed recently developed liquid chromatography (LC) mass spectrometry (MS) methods to characterize the speciation of water-soluble dissolved trace elements (Fe, Ni, Cu, and Zn) from Kansas Prairie soil. Both plant and fungal chelators were identified, revealing compound-specific patterns of chelation to biologically essential metals. Numerous metabolites typically implicated in plant iron acquisition and homeostasis, including mugineic acids, deoxymugineic acid, nicotianamine, and hydroxynicotianamine, dominated the speciation of divalent metals such as Ni, Cu, and Zn (2-57 pmol / g soil). In contrast, the fungal siderophore ferricrocine bound comparatively more trivalent Fe (9pmol / g soil). These results define biochemical pathways that underpin the regulation of metals in the grassland rhizosphere. They also raise new questions about the competition of these compounds for metal binding and their bioavailability to different members of the rhizosphere population. Even small structural differences

  19. Guidelines for terms related to chemical speciations and fractionation of elements : definitions, structural aspects, and methodological approaches (IUPAC Recommendations 2000)

    NARCIS (Netherlands)

    Templeton, D.M.; Ariese, F.; Cornelis, R.; Danielsson, L.G.; Muntau, H.; Leeuwen, van H.P.; Lobínski, R.

    2000-01-01

    This paper presents definitions of concepts related to speciation of elements, more particularly speciation analysis and chemical species. Fractionation is distinguished from speciation analysis, and a general outline of fractionation procedures is given. We propose a categorization of species

  20. Numerical analysis using Sage

    CERN Document Server

    Anastassiou, George A

    2015-01-01

    This is the first numerical analysis text to use Sage for the implementation of algorithms and can be used in a one-semester course for undergraduates in mathematics, math education, computer science/information technology, engineering, and physical sciences. The primary aim of this text is to simplify understanding of the theories and ideas from a numerical analysis/numerical methods course via a modern programming language like Sage. Aside from the presentation of fundamental theoretical notions of numerical analysis throughout the text, each chapter concludes with several exercises that are oriented to real-world application.  Answers may be verified using Sage.  The presented code, written in core components of Sage, are backward compatible, i.e., easily applicable to other software systems such as Mathematica®.  Sage is  open source software and uses Python-like syntax. Previous Python programming experience is not a requirement for the reader, though familiarity with any programming language is a p...

  1. Numerical modeling of slow shocks

    International Nuclear Information System (INIS)

    Winske, D.

    1987-01-01

    This paper reviews previous attempt and the present status of efforts to understand the structure of slow shocks by means of time dependent numerical calculations. Studies carried out using MHD or hybrid-kinetic codes have demonstrated qualitative agreement with theory. A number of unresolved issues related to hybrid simulations of the internal shock structure are discussed in some detail. 43 refs., 8 figs

  2. Development and validation of a new solver based on the interfacial area transport equation for the numerical simulation of sub-cooled boiling with OpenFOAM CFD code for nuclear safety applications

    Energy Technology Data Exchange (ETDEWEB)

    Alali, Abdullah

    2014-02-21

    The one-group interfacial area transport equation has been coupled to a wall heat flux partitioning model in the framework of two-phase Eulerian approach using the OpenFOAM CFD code for better prediction of subcooled boiling phenomena which is essential for safety analysis of nuclear reactors. The interfacial area transport equation has been modified to include the effect of bubble nucleation at the wall and condensation by subcooled liquid in the bulk that governs the non-uniform bubble size distribution.

  3. Development and validation of a new solver based on the interfacial area transport equation for the numerical simulation of sub-cooled boiling with OpenFOAM CFD code for nuclear safety applications

    International Nuclear Information System (INIS)

    Alali, Abdullah

    2014-01-01

    The one-group interfacial area transport equation has been coupled to a wall heat flux partitioning model in the framework of two-phase Eulerian approach using the OpenFOAM CFD code for better prediction of subcooled boiling phenomena which is essential for safety analysis of nuclear reactors. The interfacial area transport equation has been modified to include the effect of bubble nucleation at the wall and condensation by subcooled liquid in the bulk that governs the non-uniform bubble size distribution.

  4. Influence of uranyl speciation and iron oxides on uranium biogeochemical redox reactions

    Energy Technology Data Exchange (ETDEWEB)

    Stewart, B.D.; Amos, R.T.; Nico, P.S.; Fendorf, S.

    2010-03-15

    Uranium is a pollutant of concern to both human and ecosystem health. Uranium's redox state often dictates its partitioning between the aqueous- and solid-phases, and thus controls its dissolved concentration and, coupled with groundwater flow, its migration within the environment. In anaerobic environments, the more oxidized and mobile form of uranium (UO{sub 2}{sup 2+} and associated species) may be reduced, directly or indirectly, by microorganisms to U(IV) with subsequent precipitation of UO{sub 2}. However, various factors within soils and sediments may limit biological reduction of U(VI), inclusive of alterations in U(VI) speciation and competitive electron acceptors. Here we elucidate the impact of U(VI) speciation on the extent and rate of reduction with specific emphasis on speciation changes induced by dissolved Ca, and we examine the impact of Fe(III) (hydr)oxides (ferrihydrite, goethite and hematite) varying in free energies of formation on U reduction. The amount of uranium removed from solution during 100 h of incubation with S. putrefaciens was 77% with no Ca or ferrihydrite present but only 24% (with ferrihydrite) and 14% (no ferrihydrite) were removed for systems with 0.8 mM Ca. Imparting an important criterion on uranium reduction, goethite and hematite decrease the dissolved concentration of calcium through adsorption and thus tend to diminish the effect of calcium on uranium reduction. Dissimilatory reduction of Fe(III) and U(VI) can proceed through different enzyme pathways, even within a single organism, thus providing a potential second means by which Fe(III) bearing minerals may impact U(VI) reduction. We quantify rate coefficients for simultaneous dissimilatory reduction of Fe(III) and U(VI) in systems varying in Ca concentration (0 to 0.8 mM), and using a mathematical construct implemented with the reactive transport code MIN3P, we reveal the predominant influence of uranyl speciation, specifically the formation of uranyl

  5. Application of voxelised numerical phantoms linked to the M.C.N.P. Monte Carlo code to the realistic measurement in vivo of actinides in the lungs and contaminated wounds

    International Nuclear Information System (INIS)

    Noelle, P.

    2006-12-01

    In vivo lung counting, one of the preferred methods for monitoring people exposed to the risk of actinide inhalation, is nevertheless limited by the use of physical calibration phantoms which, for technical reasons, can only provide a rough representation of human tissue. A new approach to in vivo measurements has been developed to take advantage of advances in medical imaging and computing; this consists of numerical phantoms based on tomographic images (CT) or magnetic resonance images (R.M.I.) combined with Monte Carlo computing techniques. Under laboratory implementation of this innovative method using specific software called O.E.D.I.P.E., the main thrust of this thesis was to provide answers to the following question: what do numerical phantoms and new techniques like O.E.D.I.P.E. contribute to the improvement in calibration of low-energy in vivo counting systems? After a few developments of the O.E.D.I.P.E. interface, the numerical method was validated for systems composed of four germanium detectors, the most widespread configuration in radio bioassay laboratories (a good match was found, with less than 10% variation). This study represents the first step towards a person-specific numerical calibration of counting systems, which will improve assessment of the activity retained. A second stage focusing on an exhaustive evaluation of uncertainties encountered in in vivo lung counting was possible thanks to the approach offered by the previously-validated O.E.D.I.P.E. software. It was shown that the uncertainties suggested by experiments in a previous study were underestimated, notably morphological differences between the physical phantom and the measured person. Some improvements in the measurement procedure were then proposed, particularly new bio-metric equations specific to French measurement configurations that allow a more sensible choice of the calibration phantom, directly assessing the thickness of the torso plate to be added to the Livermore phantom

  6. Genomics of Rapid Incipient Speciation in Sympatric Threespine Stickleback.

    Directory of Open Access Journals (Sweden)

    David A Marques

    2016-02-01

    Full Text Available Ecological speciation is the process by which reproductively isolated populations emerge as a consequence of divergent natural or ecologically-mediated sexual selection. Most genomic studies of ecological speciation have investigated allopatric populations, making it difficult to infer reproductive isolation. The few studies on sympatric ecotypes have focused on advanced stages of the speciation process after thousands of generations of divergence. As a consequence, we still do not know what genomic signatures of the early onset of ecological speciation look like. Here, we examined genomic differentiation among migratory lake and resident stream ecotypes of threespine stickleback reproducing in sympatry in one stream, and in parapatry in another stream. Importantly, these ecotypes started diverging less than 150 years ago. We obtained 34,756 SNPs with restriction-site associated DNA sequencing and identified genomic islands of differentiation using a Hidden Markov Model approach. Consistent with incipient ecological speciation, we found significant genomic differentiation between ecotypes both in sympatry and parapatry. Of 19 islands of differentiation resisting gene flow in sympatry, all were also differentiated in parapatry and were thus likely driven by divergent selection among habitats. These islands clustered in quantitative trait loci controlling divergent traits among the ecotypes, many of them concentrated in one region with low to intermediate recombination. Our findings suggest that adaptive genomic differentiation at many genetic loci can arise and persist in sympatry at the very early stage of ecotype divergence, and that the genomic architecture of adaptation may facilitate this.

  7. Pollinator-Driven Speciation in Sexually Deceptive Orchids

    Directory of Open Access Journals (Sweden)

    Shuqing Xu

    2012-01-01

    Full Text Available Pollinator-mediated selection has been suggested to play a major role for the origin and maintenance of the species diversity in orchids. Sexually deceptive orchids are one of the prime examples for rapid, pollinator-mediated plant radiations, with many species showing little genetic differentiation, lack of postzygotic barriers, but strong prezygotic reproductive isolation. These orchids mimic mating signals of female insects and employ male insects as pollinators. This kind of sexual mimicry leads to highly specialised pollination and provides a good system for investigating the process of pollinator-driven speciation. Here, we summarise the knowledge of key processes of speciation in this group of orchids and conduct a meta-analysis on traits that contribute to species differentiation, and thus potentially to speciation. Our study suggests that pollinator shift through changes in floral scent is predominant among closely related species in sexually deceptive orchids. Such shifts can provide a mechanism for pollinator-driven speciation in plants, if the resulting floral isolation is strong. Furthermore, changes in floral scent in these orchids are likely controlled by few genes. Together these factors suggest speciation in sexually deceptive orchids may happen rapidly and even in sympatry, which may explain the remarkable species diversity observed in this plant group.

  8. Speciation and Health Risks of Atmospheric Nanoparticulates

    Science.gov (United States)

    Nguyen, Kennedy

    Exposure to air pollution causes several adverse health effects such as asthma, respiratory disease, cardiovascular disease, cancer, and premature death; and the San Joaquin Valley is one of the most heavily polluted regions in the US. The mountains that surround the valley allow air pollution, including particulate matter, to remain stagnant, prolonging the exposure of valley populations to it. The primary sources of particulate matter for this region are aluminosilicate dust from agricultural activities, and soot emissions from diesel trucks and vehicular traffic. A substantial fraction of emitted material is nanoparticulate matter (testing in cell culture studies, and correlation of particulate properties and sources with their negative health impacts. These results can help identify the sources of air pollution to prioritize for mitigation for the greatest health benefit. In addition, further chemical speciation can help monitor the results of such mitigation efforts. Here, natural particulate matter samples from Merced and Fresno, two cities in the San Joaquin Valley, were analyzed. Ultrafine particles present were 40 to 50 nm in diameter and mostly composed of aluminum, silicon, oxygen, and iron hydroxide. XAS data confirmed the presence of the aluminosilicate as smectite clay and the iron hydroxide as ferrihydrite. Furthermore, a chemical speciation study investigated industrial emissions of air particulate matter. Samples were analyzed using electron microscopy for elemental composition and size distribution, and found to contain fine metal particulates (lead and iron) that can lead to lung inflammation. From characterization data, in order to create a simplified proxy particle system for cell culture studies, amorphous silica particles were synthesized using a modified Stober Synthesis and coated with iron hydroxide. A range of iron hydroxide concentrations (0.06 to 1.63 mmol of iron per gram of silica) were used to test the effect of iron contamination on

  9. From concatenated codes to graph codes

    DEFF Research Database (Denmark)

    Justesen, Jørn; Høholdt, Tom

    2004-01-01

    We consider codes based on simple bipartite expander graphs. These codes may be seen as the first step leading from product type concatenated codes to more complex graph codes. We emphasize constructions of specific codes of realistic lengths, and study the details of decoding by message passing...

  10. Study of Np speciation in citrate medium

    Energy Technology Data Exchange (ETDEWEB)

    Bonin, L.; Den Auwer, C.; Ansoborlo, E.; Moisy, P. [CEA Valrho - DEN/DRCP/SCPS, Bagnols sur Ceze (France); Cote, G. [ENSP - LECA, UMR 7575, Paris (France)

    2007-07-01

    In the framework of the French Environmental Nuclear Toxicology program, additional experiments related to the decorporation of actinides are planned. Decorporation is the removal or release from target organs (bones, liver, kidney..), tissues or cells of radioactive material previously incorporated in them, using chelating agents or other administrated pharmaceutical agents. The contradictory data on the neptunium complexation behaviour within blood and its transfer to target organs, as well as the inefficiency of therapeutic treatments, led us to study the complexation of this element with biological constituents. Within this purpose, the in vitro behaviour of Np(IV) and Np(V) in simple media simulating biological fluids was studied. This study was more specifically focused on the behaviour of neptunium with citrate ion, which is an essential component in a number of metalloenzyme active sites. In order to determine the speciation of this system, spectrophotometry was more particularly used. Concerning the complexation phenomenon, the existence of several complexes of Np(V) with various acido-basic forms of the citrate anion was observed; regarding Np(IV), complexes with Cit{sup 3-} have been observed. From the quantitative study of these equilibria, the values of the absolute constants for the complexation of Np(IV) and Np(V) with citrate were determined. Concerning the stability of neptunium towards oxydo-reduction, it was confirmed that Np(VI) was very quickly reduced to Np(V) by the citrate anions, whereas Np(IV) was stable. In the case of Np(V), it was observed that, depending on the pH and the citrate concentration, Np(V) was unstable and was reduced to Np(IV). The E-pH diagrams, constructed using the stability constants determined in this study, showed that this instability was due to the Np(V) disproportionation. (orig.)

  11. Voltammetric Investigation Of Hydrothermal Iron Speciation

    Directory of Open Access Journals (Sweden)

    Charlotte eKleint

    2016-05-01

    Full Text Available Hydrothermal vent fluids are highly enriched in iron (Fe compared to ambient seawater, and organic ligands may play a role in facilitating the transport of some hydrothermal Fe into the open ocean. This is important since Fe is a limiting micronutrient for primary production in large parts of the world`s surface ocean. We have investigated the concentration and speciation of Fe in several vent fluid and plume samples from the Nifonea vent field, Coriolis Troughs, New Hebrides Island Arc, South Pacific Ocean using competitive ligand exchange - adsorptive cathodic stripping voltammetry (CLE - AdCSV with salicylaldoxime (SA as the artificial ligand. Our results for total dissolved Fe (dFe in the buoyant hydrothermal plume samples showed concentrations up to 3.86 µM dFe with only a small fraction between 1.1% and 11.8% being chemically labile. Iron binding ligand concentrations ([L] were found in µM level with strong conditional stability constants up to log K[L],Fe3+ of 22.9. Within the non-buoyant hydrothermal plume above the Nifonea vent field, up to 84.7% of the available Fe is chemically labile and [L] concentrations up to 97 nM were measured. [L] was consistently in excess of Felab, indicating that all available Fe is being complexed, which in combination with high Felab values in the non-buoyant plume, signifies that a high fraction of hydrothermal dFe is potentially being transported away from the plume into the surrounding waters, contributing to the global oceanic Fe budget.

  12. Microimaging and tomography with chemical speciation

    Energy Technology Data Exchange (ETDEWEB)

    Rau, C. E-mail: rau@esrf.fr; Somogyi, A.; Simionovici, A

    2003-01-01

    Materials science deals with the study of the morphology of samples, their chemical composition and the relation between both. One general problem is the preservation of the sample throughout the different analyses, like it is often the case for classical chemical analysis. Destruction-free chemical speciation in three dimensions with micrometer resolution can be achieved by combining X-ray spectroscopy and imaging techniques. Highly brilliant radiation is needed for this purpose available at 3rd generation synchrotrons such as the ESRF. X-ray absorption near-edge spectroscopy (XANES) is a non-destructive well-known and established technique in chemistry. By scanning the X-ray energy in the vicinity (50-100 eV) of the absorption edge of an element, information can be obtained about the oxidation state of the probed atoms. The (conventional) technique mainly employed until now applies to homogeneous, specifically prepared flat samples where the measured signal can be considered as the average over the whole irradiated volume. This restriction for samples is partially released when the XANES method is combined with imaging techniques. 2D resolved data is acquired using area detectors or by scanning with a focussed beam. X-ray absorption tomography is a method of choice for investigating the 3D structure of objects and its dual energy version is used for getting information about the 3D distribution of a given element within the sample. Although the combination of XANES and tomography seems to be a natural extension of dual-energy tomography, in practice several experimental problems have to be overcome in order to obtain useable data. In the following we describe the results of XANES imaging and tomography obtained measuring a phantom sample of pure molybdenum compounds using a FreLoN 2000 camera system at the ESRF undulator beamline ID22. This system allowed making volume resolved distinctions between different oxidation states with spatial resolution in the

  13. Speciation and Localization of Arsenic in White and Brown Rice Grains

    Energy Technology Data Exchange (ETDEWEB)

    Meharg, Andrew A.; Lombi, Enzo; Williams, Paul N.; Scheckel, Kirk G.; Feldmann, Joerg; Raab, Andrea; Zhu, Yongguan; Islam, Rafiql (EPA); (Bangladesh); (UCopenhagen); (Aberdeen); (Chinese Aca. Sci.)

    2008-06-30

    Synchrotron-based X-ray fluorescence (S-XRF) was utilized to locate arsenic (As) in polished (white) and unpolished (brown) rice grains from the United States, China, and Bangladesh. In white rice As was generally dispersed throughout the grain, the bulk of which constitutes the endosperm. In brown rice As was found to be preferentially localized at the surface, in the region corresponding to the pericarp and aleurone layer. Copper, iron, manganese, and zinc localization followed that of arsenic in brown rice, while the location for cadmium and nickel was distinctly different, showing relatively even distribution throughout the endosperm. The localization of As in the outer grain of brown rice was confirmed by laser ablation ICP?MS. Arsenic speciation of all grains using spatially resolved X-ray absorption near edge structure (?-XANES) and bulk extraction followed by anion exchange HPLC?ICP?MS revealed the presence of mainly inorganic As and dimethylarsinic acid (DMA). However, the two techniques indicated different proportions of inorganic:organic As species. A wider survey of whole grain speciation of white (n = 39) and brown (n = 45) rice samples from numerous sources (field collected, supermarket survey, and pot trials) showed that brown rice had a higher proportion of inorganic arsenic present than white rice. Furthermore, the percentage of DMA present in the grain increased along with total grain arsenic.

  14. Carbon Speciation and Anthropogenic Influences in Haitian Rivers and Inland Waters

    Science.gov (United States)

    Markowitz, M.; Paine, J.; McGillis, W. R.; Hsueh, D. Y.

    2014-12-01

    Climate, geography, and land use patterns all contribute to the social, economic, and environmental challenges in Haiti. Water quality remains a predominant issue, and the health of freshwater systems has been linked to the cycling and transformation of carbon. A speciation dominated by carbonates and bicarbonates is conducive to higher alkalinity waters, which is part of an environmental signature in which cholera and other bacteria thrive. Numerous human activities such as deforestation, biomass burning, and agricultural practices have radically changed the abundances of carbon on land and rivers in Haiti. In Haitian small mountainous rivers, carbon speciation is also influenced by the weathering of limestone and other carbonate rocks. Additionally, rain events and natural disturbances such as earthquakes have shown to drastically increase the amount of carbon in rivers and coastal waters. Since 2010, a network of both satellite and autonomous hydrometeorological stations has been deployed to monitor the climate in southwestern Haiti. Additionally, various hydrological parameters from river, reservoir, and coastal sites have been measured during field visits. Research will be continued into the wet season, providing temporal analysis needed for quantifying the abundances and transformations of carbon. Together, data from weather stations and field sites can be contextualized with local land use patterns and other human activities to offer unique insights on the carbon system. Findings may offer new perspectives on the relationships between hydrologic cycles, human health, and environmental sustainability in Haiti.

  15. Reactor Thermal Hydraulic Numerical Calculation And Modeling

    International Nuclear Information System (INIS)

    Duong Ngoc Hai; Dang The Ba

    2008-01-01

    In the paper the results of analysis of thermal hydraulic state models using the numerical codes such as COOLOD, EUREKA and RELAP5 for simulation of the reactor thermal hydraulic states are presented. The calculations, analyses of reactor thermal hydraulic state and safety were implemented using different codes. The received numerical results, which were compared each to other, to experiment measurement of Dalat (Vietnam) research reactor and published results, show their appropriateness and capacity for analyses of different appropriate cases. (author)

  16. TRAC code development status and plans

    International Nuclear Information System (INIS)

    Spore, J.W.; Liles, D.R.; Nelson, R.A.

    1986-01-01

    This report summarizes the characteristics and current status of the TRAC-PF1/MOD1 computer code. Recent error corrections and user-convenience features are described, and several user enhancements are identified. Current plans for the release of the TRAC-PF1/MOD2 computer code and some preliminary MOD2 results are presented. This new version of the TRAC code implements stability-enhancing two-step numerics into the 3-D vessel, using partial vectorization to obtain a code that has run 400% faster than the MOD1 code

  17. Numerical analysis

    CERN Document Server

    Jacques, Ian

    1987-01-01

    This book is primarily intended for undergraduates in mathematics, the physical sciences and engineering. It introduces students to most of the techniques forming the core component of courses in numerical analysis. The text is divided into eight chapters which are largely self-contained. However, with a subject as intricately woven as mathematics, there is inevitably some interdependence between them. The level of difficulty varies and, although emphasis is firmly placed on the methods themselves rather than their analysis, we have not hesitated to include theoretical material when we consider it to be sufficiently interesting. However, it should be possible to omit those parts that do seem daunting while still being able to follow the worked examples and to tackle the exercises accompanying each section. Familiarity with the basic results of analysis and linear algebra is assumed since these are normally taught in first courses on mathematical methods. For reference purposes a list of theorems used in the t...

  18. Unusual conservation of mitochondrial gene order in Crassostrea oysters: evidence for recent speciation in Asia

    Science.gov (United States)

    2010-01-01

    Background Oysters are morphologically plastic and hence difficult subjects for taxonomic and evolutionary studies. It is long been suspected, based on the extraordinary species diversity observed, that Asia Pacific is the epicenter of oyster speciation. To understand the species diversity and its evolutionary history, we collected five Crassostrea species from Asia and sequenced their complete mitochondrial (mt) genomes in addition to two newly released Asian oysters (C. iredalei and Saccostrea mordax) for a comprehensive analysis. Results The six Asian Crassostrea mt genomes ranged from 18,226 to 22,446 bp in size, and all coded for 39 genes (12 proteins, 2 rRNAs and 25 tRNAs) on the same strand. Their genomes contained a split of the rrnL gene and duplication of trnM, trnK and trnQ genes. They shared the same gene order that differed from an Atlantic sister species by as many as nine tRNA changes (6 transpositions and 3 duplications) and even differed significantly from S. mordax in protein-coding genes. Phylogenetic analysis indicates that the six Asian Crassostrea species emerged between 3 and 43 Myr ago, while the Atlantic species evolved 83 Myr ago. Conclusions The complete conservation of gene order in the six Asian Crassostrea species over 43 Myr is highly unusual given the remarkable rate of rearrangements in their sister species and other bivalves. It provides strong evidence for the recent speciation of the six Crassostrea species in Asia. It further indicates that changes in mt gene order may not be strictly a function of time but subject to other constraints that are presently not well understood. PMID:21189147

  19. Investigating ecological speciation in non-model organisms

    DEFF Research Database (Denmark)

    Foote, Andrew David

    2012-01-01

    Background: Studies of ecological speciation tend to focus on a few model biological systems. In contrast, few studies on non-model organisms have been able to infer ecological speciation as the underlying mechanism of evolutionary divergence. Questions: What are the pitfalls in studying ecological...... speciation in non-model organisms that lead to this bias? What alternative approaches might redress the balance? Organism: Genetically differentiated types of the killer whale (Orcinus orca) exhibiting differences in prey preference, habitat use, morphology, and behaviour. Methods: Review of the literature...... on killer whale evolutionary ecology in search of any difficulty in demonstrating causal links between variation in phenotype, ecology, and reproductive isolation in this non-model organism. Results: At present, we do not have enough evidence to conclude that adaptive phenotype traits linked to ecological...

  20. An axisymmetric gravitational collapse code

    Energy Technology Data Exchange (ETDEWEB)

    Choptuik, Matthew W [CIAR Cosmology and Gravity Program, Department of Physics and Astronomy, University of British Columbia, Vancouver BC, V6T 1Z1 (Canada); Hirschmann, Eric W [Department of Physics and Astronomy, Brigham Young University, Provo, UT 84604 (United States); Liebling, Steven L [Southampton College, Long Island University, Southampton, NY 11968 (United States); Pretorius, Frans [Theoretical Astrophysics, California Institute of Technology, Pasadena, CA 91125 (United States)

    2003-05-07

    We present a new numerical code designed to solve the Einstein field equations for axisymmetric spacetimes. The long-term goal of this project is to construct a code that will be capable of studying many problems of interest in axisymmetry, including gravitational collapse, critical phenomena, investigations of cosmic censorship and head-on black-hole collisions. Our objective here is to detail the (2+1)+1 formalism we use to arrive at the corresponding system of equations and the numerical methods we use to solve them. We are able to obtain stable evolution, despite the singular nature of the coordinate system on the axis, by enforcing appropriate regularity conditions on all variables and by adding numerical dissipation to hyperbolic equations.

  1. An axisymmetric gravitational collapse code

    International Nuclear Information System (INIS)

    Choptuik, Matthew W; Hirschmann, Eric W; Liebling, Steven L; Pretorius, Frans

    2003-01-01

    We present a new numerical code designed to solve the Einstein field equations for axisymmetric spacetimes. The long-term goal of this project is to construct a code that will be capable of studying many problems of interest in axisymmetry, including gravitational collapse, critical phenomena, investigations of cosmic censorship and head-on black-hole collisions. Our objective here is to detail the (2+1)+1 formalism we use to arrive at the corresponding system of equations and the numerical methods we use to solve them. We are able to obtain stable evolution, despite the singular nature of the coordinate system on the axis, by enforcing appropriate regularity conditions on all variables and by adding numerical dissipation to hyperbolic equations

  2. Simultaneous speciation of trace elements using chemical separation and neutron activation

    International Nuclear Information System (INIS)

    Chatt, A.

    2003-01-01

    Speciation neutron activation analysis (SNAA) is a sophisticated analytical technique which can be developed for studying the simultaneous speciation of a number of elements in a variety of matrices. The advantages of SNAA are demonstrated with typical examples such as (i) arsenic speciation in sea foods and water, and simultaneous speciation of (ii) arsenic, antimony and selenium in water, (iii) chlorine, bromine and iodine in fish, (iv) lanthanides in simulated vitrified waste, and (v) trace elements bound to proteins. (author)

  3. ISSEBETS 2009. 7. International Symposium on Speciation of Elements in Biological, Environmental and Toxicological Sciences

    International Nuclear Information System (INIS)

    2009-01-01

    The 7th ISSEBETS was held in August 2009 in city of Eger, Hungary. The main topics were: speciation of essential and toxic elements in food, in traditional drugs, designing functional foods through applied speciation, metallomics and metalloproteomics, metal species in health and disease, cycling of elemental species in the environment, speciation related regulations and legislation, metal environmental, bioremediation, quality assurance of speciation analysis. (S.I.)

  4. Patterns of plant speciation in the Cape floristic region.

    Science.gov (United States)

    van der Niet, Timotheüs; Johnson, Steven D

    2009-04-01

    Plant species have accumulated in the Cape region of southern Africa to a much greater degree than in areas of equivalent size in the rest of the subcontinent. Although this could be a consequence simply of lower extinction rates in the Cape, most researchers have invoked high rates of ecological speciation, driven by unique aspects of the Cape environment, as the primary explanation for this richness. To assess these ideas, we analyzed the frequencies of ecological shifts among 188 sister species pairs obtained from molecular phylogenies of eight Cape clades. Ecological shifts were evident in 80% of sister species pairs, with general habitat, pollinator, and fire-survival strategy shifts being especially frequent. Contrary to an established idea that shifts in soil type are frequently associated with speciation of Cape taxa, these shifts were relatively rare, occurring in just 17% of species pairs. More cases of sister species divergence are accompanied solely by floral than by vegetative diversification, suggesting an important role for pollinator-driven speciation. In an analysis of two large orchid genera that have radiated in both the Cape and the rest of southern Africa, the frequency of ecological shifts (general habitat, soil type, altitude and flowering time), did not differ between sister species pairs in the Cape region and those outside it. Despite suggestions that Cape plants tend to have small range sizes and show fine-scale patterns of speciation, range size did not differ significantly between species in the Cape and those outside it. We conclude that ecological speciation is likely to have been important for radiation of the Cape flora, but there is no evidence as yet for special "Cape" patterns of ecological speciation.

  5. Towards accounting for dissolved iron speciation in global ocean models

    Directory of Open Access Journals (Sweden)

    A. Tagliabue

    2011-10-01

    Full Text Available The trace metal iron (Fe is now routinely included in state-of-the-art ocean general circulation and biogeochemistry models (OGCBMs because of its key role as a limiting nutrient in regions of the world ocean important for carbon cycling and air-sea CO2 exchange. However, the complexities of the seawater Fe cycle, which impact its speciation and bioavailability, are simplified in such OGCBMs due to gaps in understanding and to avoid high computational costs. In a similar fashion to inorganic carbon speciation, we outline a means by which the complex speciation of Fe can be included in global OGCBMs in a reasonably cost-effective manner. We construct an Fe speciation model based on hypothesised relationships between rate constants and environmental variables (temperature, light, oxygen, pH, salinity and assumptions regarding the binding strengths of Fe complexing organic ligands and test hypotheses regarding their distributions. As a result, we find that the global distribution of different Fe species is tightly controlled by spatio-temporal environmental variability and the distribution of Fe binding ligands. Impacts on bioavailable Fe are highly sensitive to assumptions regarding which Fe species are bioavailable and how those species vary in space and time. When forced by representations of future ocean circulation and climate we find large changes to the speciation of Fe governed by pH mediated changes to redox kinetics. We speculate that these changes may exert selective pressure on phytoplankton Fe uptake strategies in the future ocean. In future work, more information on the sources and sinks of ocean Fe ligands, their bioavailability, the cycling of colloidal Fe species and kinetics of Fe-surface coordination reactions would be invaluable. We hope our modeling approach can provide a means by which new observations of Fe speciation can be tested against hypotheses of the processes present in governing the ocean Fe cycle in an

  6. Catalogue of nuclear fusion codes - 1976

    International Nuclear Information System (INIS)

    1976-10-01

    A catalogue is presented of the computer codes in nuclear fusion research developed by JAERI, Division of Thermonuclear Fusion Research and Division of Large Tokamak Development in particular. It contains a total of about 100 codes under the categories: Atomic Process, Data Handling, Experimental Data Processing, Engineering, Input and Output, Special Languages and Their Application, Mathematical Programming, Miscellaneous, Numerical Analysis, Nuclear Physics, Plasma Physics and Fusion Research, Plasma Simulation and Numerical Technique, Reactor Design, Solid State Physics, Statistics, and System Program. (auth.)

  7. The EU network on trace element speciation in full swing

    DEFF Research Database (Denmark)

    Cornelis, R.; Camara, C.; Ebdon, L.

    2000-01-01

    health and hygiene. The network covers a number of important issues including organotin compounds, chromium and nickel species, chemical characterisation of environmental and industrial particulate samples, risk assessment, selenium and a series of other essential and toxic elements in food, as well......The EC-funded thematic network 'Speciation 21' links scientists in analytical chemistry working in method development for the chemical speciation of trace elements, and potential users from industry and representatives of legislative agencies, in the field of environment, food and occupational...

  8. Speciation of Long-Lived Radionuclides in the Environment

    DEFF Research Database (Denmark)

    Hou, Xiaolin

    , isotopes of Pu, and 237Np in seawater, fresh water, soil, sediment, vegetations, and concrete. The developed methods are used for the investigation of the chemical speciation of these radionuclides as well as their environmental behaviours, especially in Danish environment. In addition the speciation of Pu...... isotopes in waste samples from the decommissioning of Danish nuclear facilities is also investigated. The report summarizes these works completed in this project. Through this research project, a number of research papers have been published in the scientific journals, the research results has also been...

  9. Validation of three-dimensional incompressible spatial direct numerical simulation code: A comparison with linear stability and parabolic stability equation theories for boundary-layer transition on a flat plate

    Science.gov (United States)

    Joslin, Ronald D.; Streett, Craig L.; Chang, Chau-Lyan

    1992-01-01

    Spatially evolving instabilities in a boundary layer on a flat plate are computed by direct numerical simulation (DNS) of the incompressible Navier-Stokes equations. In a truncated physical domain, a nonstaggered mesh is used for the grid. A Chebyshev-collocation method is used normal to the wall; finite difference and compact difference methods are used in the streamwise direction; and a Fourier series is used in the spanwise direction. For time stepping, implicit Crank-Nicolson and explicit Runge-Kutta schemes are used to the time-splitting method. The influence-matrix technique is used to solve the pressure equation. At the outflow boundary, the buffer-domain technique is used to prevent convective wave reflection or upstream propagation of information from the boundary. Results of the DNS are compared with those from both linear stability theory (LST) and parabolized stability equation (PSE) theory. Computed disturbance amplitudes and phases are in very good agreement with those of LST (for small inflow disturbance amplitudes). A measure of the sensitivity of the inflow condition is demonstrated with both LST and PSE theory used to approximate inflows. Although the DNS numerics are very different than those of PSE theory, the results are in good agreement. A small discrepancy in the results that does occur is likely a result of the variation in PSE boundary condition treatment in the far field. Finally, a small-amplitude wave triad is forced at the inflow, and simulation results are compared with those of LST. Again, very good agreement is found between DNS and LST results for the 3-D simulations, the implication being that the disturbance amplitudes are sufficiently small that nonlinear interactions are negligible.

  10. The intercomparison of aerosol codes

    International Nuclear Information System (INIS)

    Dunbar, I.H.; Fermandjian, J.; Gauvain, J.

    1988-01-01

    The behavior of aerosols in a reactor containment vessel following a severe accident could be an important determinant of the accident source term to the environment. Various processes result in the deposition of the aerosol onto surfaces within the containment, from where they are much less likely to be released. Some of these processes are very sensitive to particle size, so it is important to model the aerosol growth processes: agglomeration and condensation. A number of computer codes have been written to model growth and deposition processes. They have been tested against each other in a series of code comparison exercises. These exercises have investigated sensitivities to physical and numerical assumptions and have also proved a useful means of quality control for the codes. Various exercises in which code predictions are compared with experimental results are now under way

  11. Multimedia signal coding and transmission

    CERN Document Server

    Ohm, Jens-Rainer

    2015-01-01

    This textbook covers the theoretical background of one- and multidimensional signal processing, statistical analysis and modelling, coding and information theory with regard to the principles and design of image, video and audio compression systems. The theoretical concepts are augmented by practical examples of algorithms for multimedia signal coding technology, and related transmission aspects. On this basis, principles behind multimedia coding standards, including most recent developments like High Efficiency Video Coding, can be well understood. Furthermore, potential advances in future development are pointed out. Numerous figures and examples help to illustrate the concepts covered. The book was developed on the basis of a graduate-level university course, and most chapters are supplemented by exercises. The book is also a self-contained introduction both for researchers and developers of multimedia compression systems in industry.

  12. Computer codes for RF cavity design

    International Nuclear Information System (INIS)

    Ko, K.

    1992-08-01

    In RF cavity design, numerical modeling is assuming an increasingly important role with the help of sophisticated computer codes and powerful yet affordable computers. A description of the cavity codes in use in the accelerator community has been given previously. The present paper will address the latest developments and discuss their applications to cavity toning and matching problems

  13. Computer codes for RF cavity design

    International Nuclear Information System (INIS)

    Ko, K.

    1992-01-01

    In RF cavity design, numerical modeling is assuming an increasingly important role with the help of sophisticated computer codes and powerful yet affordable computers. A description of the cavity codes in use in the accelerator community has been given previously. The present paper will address the latest developments and discuss their applications to cavity tuning and matching problems. (Author) 8 refs., 10 figs

  14. Allele coding in genomic evaluation

    Directory of Open Access Journals (Sweden)

    Christensen Ole F

    2011-06-01

    the best. Conclusions Different allele coding methods lead to the same inference in the marker-based and equivalent models when a fixed general mean is included in the model. However, reliabilities of genomic breeding values are affected by the allele coding method used. The centered coding has some numerical advantages when Markov chain Monte Carlo methods are used.

  15. VOA: a 2-d plasma physics code

    International Nuclear Information System (INIS)

    Eltgroth, P.G.

    1975-12-01

    A 2-dimensional relativistic plasma physics code was written and tested. The non-thermal components of the particle distribution functions are represented by expansion into moments in momentum space. These moments are computed directly from numerical equations. Currently three species are included - electrons, ions and ''beam electrons''. The computer code runs on either the 7600 or STAR machines at LLL. Both the physics and the operation of the code are discussed

  16. ETR/ITER systems code

    Energy Technology Data Exchange (ETDEWEB)

    Barr, W.L.; Bathke, C.G.; Brooks, J.N.; Bulmer, R.H.; Busigin, A.; DuBois, P.F.; Fenstermacher, M.E.; Fink, J.; Finn, P.A.; Galambos, J.D.; Gohar, Y.; Gorker, G.E.; Haines, J.R.; Hassanein, A.M.; Hicks, D.R.; Ho, S.K.; Kalsi, S.S.; Kalyanam, K.M.; Kerns, J.A.; Lee, J.D.; Miller, J.R.; Miller, R.L.; Myall, J.O.; Peng, Y-K.M.; Perkins, L.J.; Spampinato, P.T.; Strickler, D.J.; Thomson, S.L.; Wagner, C.E.; Willms, R.S.; Reid, R.L. (ed.)

    1988-04-01

    A tokamak systems code capable of modeling experimental test reactors has been developed and is described in this document. The code, named TETRA (for Tokamak Engineering Test Reactor Analysis), consists of a series of modules, each describing a tokamak system or component, controlled by an optimizer/driver. This code development was a national effort in that the modules were contributed by members of the fusion community and integrated into a code by the Fusion Engineering Design Center. The code has been checked out on the Cray computers at the National Magnetic Fusion Energy Computing Center and has satisfactorily simulated the Tokamak Ignition/Burn Experimental Reactor II (TIBER) design. A feature of this code is the ability to perform optimization studies through the use of a numerical software package, which iterates prescribed variables to satisfy a set of prescribed equations or constraints. This code will be used to perform sensitivity studies for the proposed International Thermonuclear Experimental Reactor (ITER). 22 figs., 29 tabs.

  17. ETR/ITER systems code

    International Nuclear Information System (INIS)

    Barr, W.L.; Bathke, C.G.; Brooks, J.N.

    1988-04-01

    A tokamak systems code capable of modeling experimental test reactors has been developed and is described in this document. The code, named TETRA (for Tokamak Engineering Test Reactor Analysis), consists of a series of modules, each describing a tokamak system or component, controlled by an optimizer/driver. This code development was a national effort in that the modules were contributed by members of the fusion community and integrated into a code by the Fusion Engineering Design Center. The code has been checked out on the Cray computers at the National Magnetic Fusion Energy Computing Center and has satisfactorily simulated the Tokamak Ignition/Burn Experimental Reactor II (TIBER) design. A feature of this code is the ability to perform optimization studies through the use of a numerical software package, which iterates prescribed variables to satisfy a set of prescribed equations or constraints. This code will be used to perform sensitivity studies for the proposed International Thermonuclear Experimental Reactor (ITER). 22 figs., 29 tabs

  18. Discrete Sparse Coding.

    Science.gov (United States)

    Exarchakis, Georgios; Lücke, Jörg

    2017-11-01

    Sparse coding algorithms with continuous latent variables have been the subject of a large number of studies. However, discrete latent spaces for sparse coding have been largely ignored. In this work, we study sparse coding with latents described by discrete instead of continuous prior distributions. We consider the general case in which the latents (while being sparse) can take on any value of a finite set of possible values and in which we learn the prior probability of any value from data. This approach can be applied to any data generated by discrete causes, and it can be applied as an approximation of continuous causes. As the prior probabilities are learned, the approach then allows for estimating the prior shape without assuming specific functional forms. To efficiently train the parameters of our probabilistic generative model, we apply a truncated expectation-maximization approach (expectation truncation) that we modify to work with a general discrete prior. We evaluate the performance of the algorithm by applying it to a variety of tasks: (1) we use artificial data to verify that the algorithm can recover the generating parameters from a random initialization, (2) use image patches of natural images and discuss the role of the prior for the extraction of image components, (3) use extracellular recordings of neurons to present a novel method of analysis for spiking neurons that includes an intuitive discretization strategy, and (4) apply the algorithm on the task of encoding audio waveforms of human speech. The diverse set of numerical experiments presented in this letter suggests that discrete sparse coding algorithms can scale efficiently to work with realistic data sets and provide novel statistical quantities to describe the structure of the data.

  19. Numerical Verification Of Equilibrium Chemistry

    International Nuclear Information System (INIS)

    Piro, Markus; Lewis, Brent; Thompson, William T.; Simunovic, Srdjan; Besmann, Theodore M.

    2010-01-01

    A numerical tool is in an advanced state of development to compute the equilibrium compositions of phases and their proportions in multi-component systems of importance to the nuclear industry. The resulting software is being conceived for direct integration into large multi-physics fuel performance codes, particularly for providing boundary conditions in heat and mass transport modules. However, any numerical errors produced in equilibrium chemistry computations will be propagated in subsequent heat and mass transport calculations, thus falsely predicting nuclear fuel behaviour. The necessity for a reliable method to numerically verify chemical equilibrium computations is emphasized by the requirement to handle the very large number of elements necessary to capture the entire fission product inventory. A simple, reliable and comprehensive numerical verification method is presented which can be invoked by any equilibrium chemistry solver for quality assurance purposes.

  20. Application of a pressure based CFD code with mass transfer model based on the Rayleigh equation for the numerical simulation of the cavitating flow around a hydrofoil with circular leading edge

    Directory of Open Access Journals (Sweden)

    Deimel Christian

    2014-03-01

    Full Text Available The most common method for simulating cavitating flows is using the governing flow equations in a form with a variable density and treats both phases as incompressible in combination with a transport equation for the vapour volume fraction. This approach is commonly referred to as volume of fluid method (VoF. To determine the transition of the liquid phase to vapour and vice versa, a relation for the mass transfer is needed. Several models exist, based on slightly differing physical assumptions, for example derivation from the dynamics of single bubbles or large bubble clusters. In our simulation, we use the model of Sauer and Schnerr which is based on the Rayleigh equation. One common problem of all mass transfer models is the use of model constants which often need to be tuned with regard to the examined problem. Furthermore, these models often overpredict the turbulent dynamic viscosity in the two-phase region which counteracts the development of transient shedding behaviour and is compensated by the modification proposed by Reboud. In the presented study, we vary the parameters of the Sauer-Schnerr model with Reboud modification that we implemented into an OpenFOAM solver to match numerical to experimental data.

  1. Automatic coding method of the ACR Code

    International Nuclear Information System (INIS)

    Park, Kwi Ae; Ihm, Jong Sool; Ahn, Woo Hyun; Baik, Seung Kook; Choi, Han Yong; Kim, Bong Gi

    1993-01-01

    The authors developed a computer program for automatic coding of ACR(American College of Radiology) code. The automatic coding of the ACR code is essential for computerization of the data in the department of radiology. This program was written in foxbase language and has been used for automatic coding of diagnosis in the Department of Radiology, Wallace Memorial Baptist since May 1992. The ACR dictionary files consisted of 11 files, one for the organ code and the others for the pathology code. The organ code was obtained by typing organ name or code number itself among the upper and lower level codes of the selected one that were simultaneous displayed on the screen. According to the first number of the selected organ code, the corresponding pathology code file was chosen automatically. By the similar fashion of organ code selection, the proper pathologic dode was obtained. An example of obtained ACR code is '131.3661'. This procedure was reproducible regardless of the number of fields of data. Because this program was written in 'User's Defined Function' from, decoding of the stored ACR code was achieved by this same program and incorporation of this program into program in to another data processing was possible. This program had merits of simple operation, accurate and detail coding, and easy adjustment for another program. Therefore, this program can be used for automation of routine work in the department of radiology

  2. Error-correction coding

    Science.gov (United States)

    Hinds, Erold W. (Principal Investigator)

    1996-01-01

    This report describes the progress made towards the completion of a specific task on error-correcting coding. The proposed research consisted of investigating the use of modulation block codes as the inner code of a concatenated coding system in order to improve the overall space link communications performance. The study proposed to identify and analyze candidate codes that will complement the performance of the overall coding system which uses the interleaved RS (255,223) code as the outer code.

  3. An implicit Smooth Particle Hydrodynamic code

    Energy Technology Data Exchange (ETDEWEB)

    Knapp, Charles E. [Univ. of New Mexico, Albuquerque, NM (United States)

    2000-05-01

    An implicit version of the Smooth Particle Hydrodynamic (SPH) code SPHINX has been written and is working. In conjunction with the SPHINX code the new implicit code models fluids and solids under a wide range of conditions. SPH codes are Lagrangian, meshless and use particles to model the fluids and solids. The implicit code makes use of the Krylov iterative techniques for solving large linear-systems and a Newton-Raphson method for non-linear corrections. It uses numerical derivatives to construct the Jacobian matrix. It uses sparse techniques to save on memory storage and to reduce the amount of computation. It is believed that this is the first implicit SPH code to use Newton-Krylov techniques, and is also the first implicit SPH code to model solids. A description of SPH and the techniques used in the implicit code are presented. Then, the results of a number of tests cases are discussed, which include a shock tube problem, a Rayleigh-Taylor problem, a breaking dam problem, and a single jet of gas problem. The results are shown to be in very good agreement with analytic solutions, experimental results, and the explicit SPHINX code. In the case of the single jet of gas case it has been demonstrated that the implicit code can do a problem in much shorter time than the explicit code. The problem was, however, very unphysical, but it does demonstrate the potential of the implicit code. It is a first step toward a useful implicit SPH code.

  4. Numerical Analysis of Dusty-Gas Flows

    Science.gov (United States)

    Saito, T.

    2002-02-01

    This paper presents the development of a numerical code for simulating unsteady dusty-gas flows including shock and rarefaction waves. The numerical results obtained for a shock tube problem are used for validating the accuracy and performance of the code. The code is then extended for simulating two-dimensional problems. Since the interactions between the gas and particle phases are calculated with the operator splitting technique, we can choose numerical schemes independently for the different phases. A semi-analytical method is developed for the dust phase, while the TVD scheme of Harten and Yee is chosen for the gas phase. Throughout this study, computations are carried out on SGI Origin2000, a parallel computer with multiple of RISC based processors. The efficient use of the parallel computer system is an important issue and the code implementation on Origin2000 is also described. Flow profiles of both the gas and solid particles behind the steady shock wave are calculated by integrating the steady conservation equations. The good agreement between the pseudo-stationary solutions and those from the current numerical code validates the numerical approach and the actual coding. The pseudo-stationary shock profiles can also be used as initial conditions of unsteady multidimensional simulations.

  5. Detecting non-coding selective pressure in coding regions

    Directory of Open Access Journals (Sweden)

    Blanchette Mathieu

    2007-02-01

    Full Text Available Abstract Background Comparative genomics approaches, where orthologous DNA regions are compared and inter-species conserved regions are identified, have proven extremely powerful for identifying non-coding regulatory regions located in intergenic or intronic regions. However, non-coding functional elements can also be located within coding region, as is common for exonic splicing enhancers, some transcription factor binding sites, and RNA secondary structure elements affecting mRNA stability, localization, or translation. Since these functional elements are located in regions that are themselves highly conserved because they are coding for a protein, they generally escaped detection by comparative genomics approaches. Results We introduce a comparative genomics approach for detecting non-coding functional elements located within coding regions. Codon evolution is modeled as a mixture of codon substitution models, where each component of the mixture describes the evolution of codons under a specific type of coding selective pressure. We show how to compute the posterior distribution of the entropy and parsimony scores under this null model of codon evolution. The method is applied to a set of growth hormone 1 orthologous mRNA sequences and a known exonic splicing elements is detected. The analysis of a set of CORTBP2 orthologous genes reveals a region of several hundred base pairs under strong non-coding selective pressure whose function remains unknown. Conclusion Non-coding functional elements, in particular those involved in post-transcriptional regulation, are likely to be much more prevalent than is currently known. With the numerous genome sequencing projects underway, comparative genomics approaches like that proposed here are likely to become increasingly powerful at detecting such elements.

  6. Dynamic Shannon Coding

    OpenAIRE

    Gagie, Travis

    2005-01-01

    We present a new algorithm for dynamic prefix-free coding, based on Shannon coding. We give a simple analysis and prove a better upper bound on the length of the encoding produced than the corresponding bound for dynamic Huffman coding. We show how our algorithm can be modified for efficient length-restricted coding, alphabetic coding and coding with unequal letter costs.

  7. Fundamentals of convolutional coding

    CERN Document Server

    Johannesson, Rolf

    2015-01-01

    Fundamentals of Convolutional Coding, Second Edition, regarded as a bible of convolutional coding brings you a clear and comprehensive discussion of the basic principles of this field * Two new chapters on low-density parity-check (LDPC) convolutional codes and iterative coding * Viterbi, BCJR, BEAST, list, and sequential decoding of convolutional codes * Distance properties of convolutional codes * Includes a downloadable solutions manual

  8. Codes Over Hyperfields

    Directory of Open Access Journals (Sweden)

    Atamewoue Surdive

    2017-12-01

    Full Text Available In this paper, we define linear codes and cyclic codes over a finite Krasner hyperfield and we characterize these codes by their generator matrices and parity check matrices. We also demonstrate that codes over finite Krasner hyperfields are more interesting for code theory than codes over classical finite fields.

  9. Electrochemical metal speciation in natural and model polyelectrolyte systems

    NARCIS (Netherlands)

    Hoop, van den M.A.G.T.

    1994-01-01

    The purpose of the research described in this thesis was to examine the applicability of electro-analytical techniques in obtaining information on the speciation of metals, i.e. their distribution over different physico-chemical forms, in aquatic systems containing charged macromolecules.

  10. Speciation and determination of priority metals in sediments of Oyun ...

    African Journals Online (AJOL)

    This work was carried out to determine the concentrations, bioavailability and mobility of priority metals in sediments of Oyun River, Sango, Ilorin, Nigeria. The river sediments were sampled at six selected locations and the samples were analyzed for some certain priority metals to determine the concentration, speciation and ...

  11. Speciation and phase separation of water in quartz (A review ...

    African Journals Online (AJOL)

    By sp3-hybridization of electron bonds, the water molecule exhibits a tetrahedral charged structure, leading to various water point defects in the form of substitution of ... The formation of combined defect [SiO4]-H2O-M+ [M3+O4] upon water speciation (M+ is metallic ion), is an indication of the presence of hydrous species.

  12. Heavy metal speciation and their accumulation in sediments of Lake ...

    African Journals Online (AJOL)

    UFUOMA

    Key words: Heavy metals, chemical speciation, sediments, Burullus, Lake. INTRODUCTION ..... fuel for use in internal combustion engines and in making batteries. ..... (Tuner, 1989). According to this model, human risk assessment was .... 593 - 594. Hökanson L (1980). "Ecological Risk Index for Aquatic Pollution. Control.

  13. Comparative Studies of the Speciation Patterns of Nickel and ...

    African Journals Online (AJOL)

    Results of speciation stdies of nickel and chromium in wastewater, surface and groundwater systems using flame atomic absorption spectrometry (FAAS), graphite furnace atomic absorption spectrometry (GFAAS) and differential pulse adsorptive cathodic stripping voltammetry (DPAdCSV) are presented. Dimethylglyoxime ...

  14. Fractionation, characterization and speciation of heavy metals in ...

    African Journals Online (AJOL)

    Speciation of heavy metals in soils determines the availability for metals for plant uptake and potential for contamination of groundwater following application of composts to agricultural lands. Methods used to characterize heavy metals in solid phase of composts and compost amended soils include physical fractionation ...

  15. Behavioural isolation may facilitate homoploid hybrid speciation in cichlid fish

    NARCIS (Netherlands)

    Selz, O. M.; Thommen, R.; Maan, M. E.; Seehausen, O.

    Hybrid speciation is constrained by the homogenizing effects of gene flow from the parental species. In the absence of post-mating isolation due to structural changes in the genome, or temporal or spatial premating isolation, another form of reproductive isolation would be needed for homoploid

  16. The molecular basis of speciation: from patterns to processes, rules ...

    Indian Academy of Sciences (India)

    male; large X-effect; meiotic drive; genomic conflict. Abstract. The empirical study of speciation has brought us closer to unlocking the origins of life's vast diversity. By examining recently formed species, a number of general patterns, or rules, ...

  17. Mitochondrial Recombination and Introgression during Speciation by Hybridization.

    Science.gov (United States)

    Leducq, Jean-Baptiste; Henault, Mathieu; Charron, Guillaume; Nielly-Thibault, Lou; Terrat, Yves; Fiumera, Heather L; Shapiro, B Jesse; Landry, Christian R

    2017-08-01

    Genome recombination is a major source of genotypic diversity and contributes to adaptation and speciation following interspecies hybridization. The contribution of recombination in these processes has been thought to be largely limited to the nuclear genome because organelles are mostly uniparentally inherited in animals and plants, which prevents recombination. Unicellular eukaryotes such as budding yeasts do, however, transmit mitochondria biparentally, suggesting that during hybridization, both parents could provide alleles that contribute to mitochondrial functions such as respiration and metabolism in hybrid populations or hybrid species. We examined the dynamics of mitochondrial genome transmission and evolution during speciation by hybridization in the natural budding yeast Saccharomyces paradoxus. Using population-scale mitochondrial genome sequencing in two endemic North American incipient species SpB and SpC and their hybrid species SpC*, we found that both parental species contributed to the hybrid mitochondrial genome through recombination. We support our findings by showing that mitochondrial recombination between parental types is frequent in experimental crosses that recreate the early step of this speciation event. In these artificial hybrids, we observed that mitochondrial genome recombination enhances phenotypic variation among diploid hybrids, suggesting that it could play a role in the phenotypic differentiation of hybrid species. Like the nuclear genome, the mitochondrial genome can, therefore, also play a role in hybrid speciation. © The Author 2017. Published by Oxford University Press on behalf of the Society for Molecular Biology and Evolution. All rights reserved. For permissions, please e-mail: journals.permissions@oup.com.

  18. Heavy metal speciation and their accumulation in sediments of Lake ...

    African Journals Online (AJOL)

    Several sediment samples in Lake Burullus have been affected by the discharges of heavy metals through different drains. The study aimed to analyze the chemical speciation of these metals. In particular, the chemical forms of Cd, Cu, Fe, Mn, Pb and Zn in sediments collected in spring season were studied using a ...

  19. Mercury speciation with fluorescent gold nanocluster as a probe.

    Science.gov (United States)

    Yang, Jian-Yu; Yang, Ting; Wang, Xiao-Yan; Chen, Ming-Li; Yu, Yong-Liang; Wang, Jian-Hua

    2018-05-11

    Fluorescent nanoparticles are widely used for sensing biologically significant species. However, it is rarely reported for the discrimination or speciation of metal species. In this work, we report for the first time the speciation of mercury (Hg 2+ ) and methylmercury (CH 3 Hg + ) by taking advantage of the fluorescence feature of folic acid-capped gold nanoclusters (FA-AuNCs). FA-Au NCs exhibit an average size of 2.08±0.15 nm and a maximum emission at λ ex /λ em = 280/440 nm with a quantum yield of 27.3%. It is interesting that Hg 2+ causes a significant quench on the fluorescence of FA-Au NCs, whereas CH 3 Hg + leads to a remarkable fluorescence enhancement. Based on this discriminative fluorescent response between Hg 2+ and CH 3 Hg + , a novel nanosensor for the speciation of CH 3 Hg + and Hg 2+ was developed, providing limits of detection (LOD) of 28 nM for Hg 2+ and 25 nM for CH 3 Hg + within 100-1000 nM. This sensing system is highly selective to mercury. Its practical applications were further demonstrated by the analysis of CH 3 Hg + and the speciation of mercury (CH 3 Hg + and Hg 2+ ) in environmental water and fish samples.

  20. Geometry, charge distribution, and surface speciation of phosphate on goethite.

    NARCIS (Netherlands)

    Rahnemaie, R.; Hiemstra, T.; Riemsdijk, van W.H.

    2007-01-01

    The surface speciation of phosphate has been evaluated with surface complexation modeling using an interfacial charge distribution (CD) approach based on ion adsorption and ordering of interfacial water. In the CD model, the charge of adsorbed ions is distributed over two electrostatic potentials in

  1. Speciation of Fe in Fe-modified zeolite catalysts

    Czech Academy of Sciences Publication Activity Database

    Smoláková, L.; Grygar, Tomáš; Čapek, L.; Schneeweiss, Oldřich; Zbořil, R.

    2010-01-01

    Roč. 647, č. 1 (2010), s. 8-19 ISSN 1572-6657 Institutional research plan: CEZ:AV0Z40320502; CEZ:AV0Z20410507 Keywords : solid state speciation * Fe2O3 * heterogeneous catalysts Subject RIV: CB - Analytical Chemistry, Separation Impact factor: 2.732, year: 2010

  2. Speciation Studies of Some Toxic Metal Complexes of Glycylglycine ...

    African Journals Online (AJOL)

    NICO

    mixtures apart from its established utility in understanding ... Chemical speciation of metals is important for an understand- ... Titrations with differ- ent ratios (1:2.5, 1:3.5 and 1:5) of metal-ligand were performed with 0.4 mol L–1 sodium hydroxide solution. The mixtures obtained from PG and water are non-ideal due.

  3. Speciation of Candida isolates obtained from diarrheal stool

    Directory of Open Access Journals (Sweden)

    Beena Uppal

    2016-01-01

    Conclusion Candida diarrhea was mostly seen in individuals younger than 12 years, most commonly caused by C. krusei. Resistance to fluconazole was high. A rising resistance to amphotericin B is alarming. Speciation of Candida is important to see the difference in antifungal susceptibility in different species.

  4. FINE PARTICULATE MATTER (PM) AND ORGANIC SPECIATION OF FIREPLACE EMISSIONS

    Science.gov (United States)

    This paper presents a summary of fireplace particle size and organic speciation data gathered to date in an on-going project. Tests are being conducted in a residential wood combustion (RWC) laboratory on three factory-built fireplaces. RWC wood smoke particles <10?m (PM10) con...

  5. Speciation of Zinc Mixed Ligand Complexes in Salt Water Systems ...

    African Journals Online (AJOL)

    Speciation of Zinc Mixed Ligand Complexes in Salt Water Systems. ... method has been used to study heavy metal interaction in model lake water in KNO3 ... is of no consequential effect because in its normal state, the [OH-] of the lake water is ...

  6. Speciation and bioavailability of copper in Lake Tjeukemeer

    NARCIS (Netherlands)

    Verweij, W.

    1991-01-01

    Chapter 1: introduction

    In this thesis an account is given of a research project dealing with the chemical speciation and bioavailability of copper in Lake Tjeukemeer, a lake in the north of the Netherlands. The reason for the initiation of this project was a lack of

  7. Distribution and Speciation of Mercury in Mine Waste Dumps

    Czech Academy of Sciences Publication Activity Database

    Hojdová, Maria; Navrátil, Tomáš; Rohovec, Jan

    2008-01-01

    Roč. 80, č. 3 (2008), s. 237-241 ISSN 0007-4861 R&D Projects: GA AV ČR(CZ) KJB300130615 Institutional research plan: CEZ:AV0Z30130516 Keywords : mercury * mine waste * mercury speciation * thermo-desorption analysis Subject RIV: DD - Geochemistry Impact factor: 0.609, year: 2008

  8. Speciation and migration of 129I in soil profiles

    DEFF Research Database (Denmark)

    Luo, Maoyi; Hou, Xiaolin; Zhou, Weijian

    2013-01-01

    A method has been developed for speciation analysis of ultra low level 129I in soil using sequential extraction combined with coprecipitation for separation of carrier free iodine and AMS measurement of 129I. Two loess profiles collected from northwest China were analyzed for species of 129I...

  9. Phytotoxicity and bioavailablity of nickel: chemical speciation and bioaccumulation

    NARCIS (Netherlands)

    Weng, L.P.; Lexmond, T.M.; Wolthoorn, A.; Temminghoff, E.J.M.; Riemsdijk, van W.H.

    2003-01-01

    The effect of pH on the bioaccumulation of nickel (Ni) by plants is opposite when using a nutrient solution or a soil as a growing medium. This paradox can be understood if the pH effect on the bioaccumulation, on the chemical speciation in the soil solution, and on the binding to the soil of Ni are

  10. Numerical Methods for Radiation Magnetohydrodynamics in Astrophysics

    Energy Technology Data Exchange (ETDEWEB)

    Klein, R I; Stone, J M

    2007-11-20

    We describe numerical methods for solving the equations of radiation magnetohydrodynamics (MHD) for astrophysical fluid flow. Such methods are essential for the investigation of the time-dependent and multidimensional dynamics of a variety of astrophysical systems, although our particular interest is motivated by problems in star formation. Over the past few years, the authors have been members of two parallel code development efforts, and this review reflects that organization. In particular, we discuss numerical methods for MHD as implemented in the Athena code, and numerical methods for radiation hydrodynamics as implemented in the Orion code. We discuss the challenges introduced by the use of adaptive mesh refinement in both codes, as well as the most promising directions for future developments.

  11. Numerical Methods for Radiation Magnetohydrodynamics in Astrophysics

    International Nuclear Information System (INIS)

    Klein, R I; Stone, J M

    2007-01-01

    We describe numerical methods for solving the equations of radiation magnetohydrodynamics (MHD) for astrophysical fluid flow. Such methods are essential for the investigation of the time-dependent and multidimensional dynamics of a variety of astrophysical systems, although our particular interest is motivated by problems in star formation. Over the past few years, the authors have been members of two parallel code development efforts, and this review reflects that organization. In particular, we discuss numerical methods for MHD as implemented in the Athena code, and numerical methods for radiation hydrodynamics as implemented in the Orion code. We discuss the challenges introduced by the use of adaptive mesh refinement in both codes, as well as the most promising directions for future developments

  12. Spurious Numerical Solutions Of Differential Equations

    Science.gov (United States)

    Lafon, A.; Yee, H. C.

    1995-01-01

    Paper presents detailed study of spurious steady-state numerical solutions of differential equations that contain nonlinear source terms. Main objectives of this study are (1) to investigate how well numerical steady-state solutions of model nonlinear reaction/convection boundary-value problem mimic true steady-state solutions and (2) to relate findings of this investigation to implications for interpretation of numerical results from computational-fluid-dynamics algorithms and computer codes used to simulate reacting flows.

  13. Numerical simulation of hypersonic flight experiment vehicle

    OpenAIRE

    Yamamoto, Yukimitsu; Yoshioka, Minako; 山本 行光; 吉岡 美菜子

    1994-01-01

    Hypersonic aerodynamic characteristics of Hypersonic FLight EXperiment (HYFLEX vehicle were investigated by numerical simulations using Navier-Stokes CFD (Computational Fluid Dynamics) code of NAL. Numerical results were compared with experimental data obtained at Hypersonic Wind Tunnel at NAL. In order to investigate real flight aerodynamic characteristics. numerical calculations corresponding to the flight conditions suffering from maximum aero thermodynamic heating were also made and the d...

  14. Application of voxelised numerical phantoms linked to the M.C.N.P. Monte Carlo code to the realistic measurement in vivo of actinides in the lungs and contaminated wounds; Application des fantomes numeriques voxelises associes au code Monte Carlo MCNP a la mesure in vivo realiste des actinides dans les poumons et les plaies contaminees

    Energy Technology Data Exchange (ETDEWEB)

    Noelle, P

    2006-12-15

    In vivo lung counting, one of the preferred methods for monitoring people exposed to the risk of actinide inhalation, is nevertheless limited by the use of physical calibration phantoms which, for technical reasons, can only provide a rough representation of human tissue. A new approach to in vivo measurements has been developed to take advantage of advances in medical imaging and computing; this consists of numerical phantoms based on tomographic images (CT) or magnetic resonance images (R.M.I.) combined with Monte Carlo computing techniques. Under laboratory implementation of this innovative method using specific software called O.E.D.I.P.E., the main thrust of this thesis was to provide answers to the following question: what do numerical phantoms and new techniques like O.E.D.I.P.E. contribute to the improvement in calibration of low-energy in vivo counting systems? After a few developments of the O.E.D.I.P.E. interface, the numerical method was validated for systems composed of four germanium detectors, the most widespread configuration in radio bioassay laboratories (a good match was found, with less than 10% variation). This study represents the first step towards a person-specific numerical calibration of counting systems, which will improve assessment of the activity retained. A second stage focusing on an exhaustive evaluation of uncertainties encountered in in vivo lung counting was possible thanks to the approach offered by the previously-validated O.E.D.I.P.E. software. It was shown that the uncertainties suggested by experiments in a previous study were underestimated, notably morphological differences between the physical phantom and the measured person. Some improvements in the measurement procedure were then proposed, particularly new bio-metric equations specific to French measurement configurations that allow a more sensible choice of the calibration phantom, directly assessing the thickness of the torso plate to be added to the Livermore phantom

  15. Speciation of trace elements in the environmental studies

    International Nuclear Information System (INIS)

    Reddy, A.V.R.

    2012-01-01

    Elements present at trace levels, often referred as trace elements, play an important role in the environment and in the functioning of life on our planet. Trace elements in environment present as free metal ions or incorporated into colloids or attached to particulate matter or exist in different physical and chemical forms. It is well established that some elements are highly toxic and some are essential, but can become toxic at higher doses. It is also now known that the forms of elements (speciation) and their amounts are more important than the chemical dose of the elements as their interaction depends on different species. For example, Cr(VI) ions are considered far more toxic than Cr(III), whereas As(III) is more toxic than As(V). Similarly, in the case of mercury, both methylmercury and inorganic mercury are toxic but they show different levels of toxicity. Thus the adverse effects depend on the nature of species of the elements and therefore speciation studies are of paramount importance in many areas like toxicology, environmental chemistry and geochemisty. In view of this, speciation studies is a challenge to analytical chemists as the measurement methodologies have to be carefully developed, validated and applied. The grand challenge is to obtain quality data ensuring traceability, as the data obtained will be used in modeling for predicting the environmental impacts. In this talk importance of speciation and challenges to environmental analytical chemists will be discussed along with the following three speciation studies on Cr, U and Hg which were carried out in our laboratories

  16. Purex process modelling - do we really need speciation data?

    International Nuclear Information System (INIS)

    Taylor, R.J.; May, I.

    2001-01-01

    The design of reprocessing flowsheets has become a complex process requiring sophisticated simulation models, containing both chemical and engineering features. Probably the most basic chemical data needed is the distribution of process species between solvent and aqueous phases at equilibrium, which is described by mathematical algorithms. These algorithms have been constructed from experimentally determined distribution coefficients over a wide range of conditions. Distribution algorithms can either be empirical fits of the data or semi-empirical equations, which describe extraction as functions of process variables such as temperature, activity coefficients, uranium loading, etc. Speciation data is not strictly needed in the accumulation of distribution coefficients, which are simple ratios of analyte concentration in the solvent phase to that in the aqueous phase. However, as we construct process models of increasing complexity, speciation data becomes much more important both to raise confidence in the model and to understand the process chemistry at a more fundamental level. UV/vis/NIR spectrophotometry has been our most commonly used speciation method since it is a well-established method for the analysis of actinide ion oxidation states in solution at typical process concentrations. However, with the increasing availability to actinide science of more sophisticated techniques (e.g. NMR; EXAFS) complementary structural information can often be obtained. This paper will, through examples, show how we have used spectrophotometry as a primary tool in distribution and kinetic experiments to obtain data for process models, which are then validated through counter-current flowsheet trials. It will also discuss how spectrophotometry and other speciation methods are allowing us to study the link between molecular structure and extraction behaviour, showing how speciation data really is important in PUREX process modelling. (authors)

  17. Sex chromosomes and speciation in birds and other ZW systems.

    Science.gov (United States)

    Irwin, Darren E

    2018-02-14

    Theory and empirical patterns suggest a disproportionate role for sex chromosomes in evolution and speciation. Focusing on ZW sex determination (females ZW, males ZZ; the system in birds, many snakes, and lepidopterans), I review how evolutionary dynamics are expected to differ between the Z, W and the autosomes, discuss how these differences may lead to a greater role of the sex chromosomes in speciation and use data from birds to compare relative evolutionary rates of sex chromosomes and autosomes. Neutral mutations, partially or completely recessive beneficial mutations, and deleterious mutations under many conditions are expected to accumulate faster on the Z than on autosomes. Sexually antagonistic polymorphisms are expected to arise on the Z, raising the possibility of the spread of preference alleles. The faster accumulation of many types of mutations and the potential for complex evolutionary dynamics of sexually antagonistic traits and preferences contribute to a role for the Z chromosome in speciation. A quantitative comparison among a wide variety of bird species shows that the Z tends to have less within-population diversity and greater between-species differentiation than the autosomes, likely due to both adaptive evolution and a greater rate of fixation of deleterious alleles. The W chromosome also shows strong potential to be involved in speciation, in part because of its co-inheritance with the mitochondrial genome. While theory and empirical evidence suggest a disproportionate role for sex chromosomes in speciation, the importance of sex chromosomes is moderated by their small size compared to the whole genome. © 2018 John Wiley & Sons Ltd.

  18. Simultaneous speciation neutron activation analysis for trace elements

    International Nuclear Information System (INIS)

    Chatt, A.; Kiceniuk, J.W.; Menendez Sanchez, W.; Bottaro, C.

    2006-01-01

    Among the various forms of neutron activation technique being developed in our laboratory, much emphasis has been placed over the last ten years or so on the development of simultaneous speciation neutron activation analysis (SSNAA). This technique can now be used for the simultaneous determination of various species of a number of elements. Almost all speciation techniques consist of two steps. The first step involves the separation of species from the sample followed by the second step of element-specific detection. A number of characteristic features of NAA, which other techniques normally do not possess, can be advantageously exploited in SSNAA. For example, SSNAA can be used for: (i) multielement speciation with high specificity, (ii) speciation of chemically dissimilar elements such as Cd, Mn and Se, (iii) speciation of elements such as Cl, Br and I which are rather difficult to determine by most other techniques, etc. We have developed SSNAA methods for assaying various arsenic species, namely As(III), As(V), dimethyl arsonic acid (DMA), monomethylarsinic acid (MMA), arsenobetaine (AsB), organically bound arsenic (OBAs), and lipid-soluble arsenic (LSAs) in marine fish samples. We have extended these methods to include simultaneous determination of various species of As, Sb and Se in water. We have also developed SSNAA methods employing biochemical techniques for the simultaneous separation, preconcentration and characterization of metalloproteins and protein-bound trace element species of As, Br, Cd, Cu, Mn, Se, and Zn. We have developed methods for the simultaneous separation and characterization of organohalogen compounds in fish. An overview of the SSNAA methods being developed in our laboratory will be presented. (author)

  19. GAMERA - The New Magnetospheric Code

    Science.gov (United States)

    Lyon, J.; Sorathia, K.; Zhang, B.; Merkin, V. G.; Wiltberger, M. J.; Daldorff, L. K. S.

    2017-12-01

    The Lyon-Fedder-Mobarry (LFM) code has been a main-line magnetospheric simulation code for 30 years. The code base, designed in the age of memory to memory vector ma- chines,is still in wide use for science production but needs upgrading to ensure the long term sustainability. In this presentation, we will discuss our recent efforts to update and improve that code base and also highlight some recent results. The new project GAM- ERA, Grid Agnostic MHD for Extended Research Applications, has kept the original design characteristics of the LFM and made significant improvements. The original de- sign included high order numerical differencing with very aggressive limiting, the ability to use arbitrary, but logically rectangular, grids, and maintenance of div B = 0 through the use of the Yee grid. Significant improvements include high-order upwinding and a non-clipping limiter. One other improvement with wider applicability is an im- proved averaging technique for the singularities in polar and spherical grids. The new code adopts a hybrid structure - multi-threaded OpenMP with an overarching MPI layer for large scale and coupled applications. The MPI layer uses a combination of standard MPI and the Global Array Toolkit from PNL to provide a lightweight mechanism for coupling codes together concurrently. The single processor code is highly efficient and can run magnetospheric simulations at the default CCMC resolution faster than real time on a MacBook pro. We have run the new code through the Athena suite of tests, and the results compare favorably with the codes available to the astrophysics community. LFM/GAMERA has been applied to many different situations ranging from the inner and outer heliosphere and magnetospheres of Venus, the Earth, Jupiter and Saturn. We present example results the Earth's magnetosphere including a coupled ring current (RCM), the magnetospheres of Jupiter and Saturn, and the inner heliosphere.

  20. Uncertainty Quantification in Numerical Aerodynamics

    KAUST Repository

    Litvinenko, Alexander; Matthies, Hermann G.; Liu, Dishi; Schillings, Claudia; Schulz, Volker

    2017-01-01

    In numerical section we compares five methods, including quasi-Monte Carlo quadrature, polynomial chaos with coefficients determined by sparse quadrature and gradient-enhanced version of Kriging, radial basis functions and point collocation polynomial chaos, in their efficiency in estimating statistics of aerodynamic performance upon random perturbation to the airfoil geometry [D.Liu et al '17]. For modeling we used the TAU code, developed in DLR, Germany.

  1. Potential of the MCNP computer code

    International Nuclear Information System (INIS)

    Kyncl, J.

    1995-01-01

    The MCNP code is designed for numerical solution of neutron, photon, and electron transport problems by the Monte Carlo method. The code is based on the linear transport theory of behavior of the differential flux of the particles. The code directly uses data from the cross section point data library for input. Experience is outlined, gained in the application of the code to the calculation of the effective parameters of fuel assemblies and of the entire reactor core, to the determination of the effective parameters of the elementary fuel cell, and to the numerical solution of neutron diffusion and/or transport problems of the fuel assembly. The agreement between the calculated and observed data gives evidence that the MCNP code can be used with advantage for calculations involving WWER type fuel assemblies. (J.B.). 4 figs., 6 refs

  2. Vector Network Coding Algorithms

    OpenAIRE

    Ebrahimi, Javad; Fragouli, Christina

    2010-01-01

    We develop new algebraic algorithms for scalar and vector network coding. In vector network coding, the source multicasts information by transmitting vectors of length L, while intermediate nodes process and combine their incoming packets by multiplying them with L x L coding matrices that play a similar role as coding c in scalar coding. Our algorithms for scalar network jointly optimize the employed field size while selecting the coding coefficients. Similarly, for vector coding, our algori...

  3. QR codes: next level of social media.

    Science.gov (United States)

    Gottesman, Wesley; Baum, Neil

    2013-01-01

    The OR code, which is short for quick response code, system was invented in Japan for the auto industry. Its purpose was to track vehicles during manufacture; it was designed to allow high-speed component scanning. Now the scanning can be easily accomplished via cell phone, making the technology useful and within reach of your patients. There are numerous applications for OR codes in the contemporary medical practice. This article describes QR codes and how they might be applied for marketing and practice management.

  4. Homological stabilizer codes

    Energy Technology Data Exchange (ETDEWEB)

    Anderson, Jonas T., E-mail: jonastyleranderson@gmail.com

    2013-03-15

    In this paper we define homological stabilizer codes on qubits which encompass codes such as Kitaev's toric code and the topological color codes. These codes are defined solely by the graphs they reside on. This feature allows us to use properties of topological graph theory to determine the graphs which are suitable as homological stabilizer codes. We then show that all toric codes are equivalent to homological stabilizer codes on 4-valent graphs. We show that the topological color codes and toric codes correspond to two distinct classes of graphs. We define the notion of label set equivalencies and show that under a small set of constraints the only homological stabilizer codes without local logical operators are equivalent to Kitaev's toric code or to the topological color codes. - Highlights: Black-Right-Pointing-Pointer We show that Kitaev's toric codes are equivalent to homological stabilizer codes on 4-valent graphs. Black-Right-Pointing-Pointer We show that toric codes and color codes correspond to homological stabilizer codes on distinct graphs. Black-Right-Pointing-Pointer We find and classify all 2D homological stabilizer codes. Black-Right-Pointing-Pointer We find optimal codes among the homological stabilizer codes.

  5. Study of solution speciation, soil retention and soil-plant transfer of zirconium

    International Nuclear Information System (INIS)

    Ferrand, E.

    2005-12-01

    Within the framework of the risks prevention policy of Andra, the radioactive zirconium introduction ( 93 Zr and 95 Zr) into the environment could be carried out starting from the nuclear waste whose storage is envisaged in deep geological layers. Thus, the goal of this study was to evaluate the parameters and phenomena influencing speciation (various chemical forms) and the soil-plant transfer of zirconium. Experiments of adsorption/desorption of zirconium with different ligands likely to be present in soils (goethite and humic acid) and with two soils, with contrasted characteristics, close to the underground research laboratory of Andra (Meuse) were carried out. These results of adsorption were then confronted with those obtained by the MUSIC and NICA-DONNAN models carried out using the computer code ECOSAT. Zr presents a strong affinity for the two types of soils and the soils constituents. Specific interactions of internal sphere type with the goethite were highlighted using the model. Soil-solution partition coefficients, or K d , values increase with pH and contact time. Various types of edible plants, pea (Pisum sativum L.) and tomato (Lycopersicon esculentum L cv. St Pierre) were cultivated in hydroponic conditions and in soils spiked with various sources of Zirconium. The maximum zirconium contents are mainly measured in the roots of the plants. The soil-plant transfer factors measured during these experiments show a weak bioavailability of zirconium. An influence of speciation on Zr bioavailability is however highlighted. Some chemical forms, such as oxychloride or acetate, are more easily mobilized than others by the plant. (author)

  6. Speciation of Metals and Assessment of Contamination in Surface Sediments from Daya Bay, South China Sea

    Directory of Open Access Journals (Sweden)

    Jie Yang

    2014-12-01

    Full Text Available The contents, speciation, source factors and potential ecological risks of the selected metals (Cr, Ni, Cu, Pb, Zn, Cd and As were analyzed in surface sediments from Daya Bay (DYB. The results show that, with the exception of Pb, metal concentrations have decreased at all sites over the past decade. The distribution features of these concentrations represent a ring shape that descends from shore to bay by varying degrees. Speciation analysis showed that Cr, Ni, Cu, Zn and As exist mainly in the residual fraction and, thus, are of low bioavailability, while Cd and Pb were found to be abundant in the non-residual fraction and, thus, have high potential mobility. The ratio of heavy metals in non-residual form in descending order is Pb (78.83%, Cd (78.65%, Cu (48.54%, Zn (48.10%, Ni (38.31%, Cr (28.43% and As (27.76%. The ratio of Pb content is the highest, meaning the highest mobility of Pb. The metals’ potential ecological risks to the environment were also assessed using the methods of the mean effect range-median quotient and the criteria of risk assessment code. The results showed that Cd presents the highest risk, and Pb and Cu are generally considered to be medium risks in the sub-basins of Daya Bay. The principal component analysis (PCA revealed that natural coastal weathering and erosion of rock caused the highest input, followed by mariculture and industrial wastewater and, finally, domestic sewage discharge.

  7. The Accurate Particle Tracer Code

    OpenAIRE

    Wang, Yulei; Liu, Jian; Qin, Hong; Yu, Zhi

    2016-01-01

    The Accurate Particle Tracer (APT) code is designed for large-scale particle simulations on dynamical systems. Based on a large variety of advanced geometric algorithms, APT possesses long-term numerical accuracy and stability, which are critical for solving multi-scale and non-linear problems. Under the well-designed integrated and modularized framework, APT serves as a universal platform for researchers from different fields, such as plasma physics, accelerator physics, space science, fusio...

  8. QUARTZ: a numerical simulation of an asymmetric electrostatic accelerator

    International Nuclear Information System (INIS)

    Wooten, J.W.; Drooks, L.J.; McCollough, D.H.; McGaffey, R.W.; Whealton, J.H.

    1979-01-01

    The physics and numerical aspects of the development of the computer code QUARTZ are given. This code includes the (1) use of a finite element code to obtain solutions of Poisson's equation in an asymmetric, three-dimensional volume; (2) inclusion of space charge neutralization by electrons; and (3) inclusion of ion space charge through an iterative procedure

  9. Blahut-Arimoto algorithm and code design for action-dependent source coding problems

    DEFF Research Database (Denmark)

    Trillingsgaard, Kasper Fløe; Simeone, Osvaldo; Popovski, Petar

    2013-01-01

    The source coding problem with action-dependent side information at the decoder has recently been introduced to model data acquisition in resource-constrained systems. In this paper, an efficient Blahut-Arimoto-type algorithm for the numerical computation of the rate-distortion-cost function...... for this problem is proposed. Moreover, a simplified two-stage code structure based on multiplexing is put forth, whereby the first stage encodes the actions and the second stage is composed of an array of classical Wyner-Ziv codes, one for each action. Leveraging this structure, specific coding/decoding...... strategies are designed based on LDGM codes and message passing. Through numerical examples, the proposed code design is shown to achieve performance close to the rate-distortion-cost function....

  10. MAGNETOHYDRODYNAMIC EQUATIONS (MHD GENERATION CODE

    Directory of Open Access Journals (Sweden)

    Francisco Frutos Alfaro

    2017-04-01

    Full Text Available A program to generate codes in Fortran and C of the full magnetohydrodynamic equations is shown. The program uses the free computer algebra system software REDUCE. This software has a package called EXCALC, which is an exterior calculus program. The advantage of this program is that it can be modified to include another complex metric or spacetime. The output of this program is modified by means of a LINUX script which creates a new REDUCE program to manipulate the magnetohydrodynamic equations to obtain a code that can be used as a seed for a magnetohydrodynamic code for numerical applications. As an example, we present part of the output of our programs for Cartesian coordinates and how to do the discretization.

  11. Diagnostic Coding for Epilepsy.

    Science.gov (United States)

    Williams, Korwyn; Nuwer, Marc R; Buchhalter, Jeffrey R

    2016-02-01

    Accurate coding is an important function of neurologic practice. This contribution to Continuum is part of an ongoing series that presents helpful coding information along with examples related to the issue topic. Tips for diagnosis coding, Evaluation and Management coding, procedure coding, or a combination are presented, depending on which is most applicable to the subject area of the issue.

  12. Coding of Neuroinfectious Diseases.

    Science.gov (United States)

    Barkley, Gregory L

    2015-12-01

    Accurate coding is an important function of neurologic practice. This contribution to Continuum is part of an ongoing series that presents helpful coding information along with examples related to the issue topic. Tips for diagnosis coding, Evaluation and Management coding, procedure coding, or a combination are presented, depending on which is most applicable to the subject area of the issue.

  13. A description of the two-dimensional combustion code FLARE

    International Nuclear Information System (INIS)

    Martin, D.

    1986-07-01

    This report gives details of the computer code FLARE. The model used for the turbulent combustion of premixed gases is described. Details of the numerical scheme used to solve the resulting equations are discussed. The input and output for the code are also described. Details of the coding are given in the Appendices together with sample input and output. (author)

  14. U(IV) fluorescence spectroscopy. A new speciation tool

    Energy Technology Data Exchange (ETDEWEB)

    Lehmann, Susanne; Brendler, Vinzenz [Helmholtz-Zentrum Dresden-Rossendorf e.V., Dresden (Germany). Surface Processes; Steudtner, Robin [Helmholtz-Zentrum Dresden-Rossendorf e.V., Dresden (Germany). Inst. of Resource Ecology

    2017-06-01

    We combined absorption and fluorescence spectroscopy to study the speciation of U(IV) in solution in concentrations down to 10{sup -6} M uranium. With our time-resolved laser-induced fluorescence setup we could determine the fluorescence decay time of U(IV) in perchloric as well as in chloric acid with 2.6 ± 0.3 ns at room temperature and 148.4 ± 6.5 ns at liquid nitrogen temperature. For the U(IV) sulfate system, we observed a bathochromic shift and a peak shape modification in the fluorescence spectra with increasing sulfate concentration in solution. Thus, the potential of U(IV) fluorescence for speciation analysis could be proven.

  15. Synergy between Allopatry and Ecology in Population Differentiation and Speciation

    Directory of Open Access Journals (Sweden)

    Yann Surget-Groba

    2012-01-01

    Full Text Available The general diversity pattern of the Caribbean anole radiation has been described in detail; however, the actual mechanisms at the origin of their diversification remain controversial. In particular, the role of ecological speciation, and the relative importance of divergence in allopatry and in parapatry, is debated. We describe the genetic structure of anole populations across lineage contact zones and ecotones to investigate the effect of allopatric divergence, natural selection, and the combination of both factors on population differentiation. Allopatric divergence had no significant impact on differentiation across the lineage boundary, while a clear bimodality in genetic and morphological characters was observed across an ecotone within a single lineage. Critically, the strongest differentiation was observed when allopatry and ecology act together, leading to a sharp reduction in gene flow between two lineages inhabiting different habitats. We suggest that, for Caribbean anoles to reach full speciation, a synergistic combination of several historical and ecological factors may be requisite.

  16. Determining uranium speciation in Fernald soils by molecular spectroscopic methods

    International Nuclear Information System (INIS)

    Allen, P.G.; Berg, J.M.; Crisholm-Brause, C.J.; Conradson, S.D.; Donohoe, R.J.; Morris, D.E.; Musgrave, J.A.; Tait, C.D.

    1994-07-01

    This progress report describes new experimental results and interpretations for data collected from October 1, 1992, through September 30, 1993, as part of the Characterization Task of the Uranium in Soils Integrated Demonstration of the Office of Technology Development, Office of Environmental Restoration and Waste Management of the US Department of Energy. X-ray absorption, optical luminescence, and Raman vibrational spectroscopies were used to determine uranium speciation in contaminated soils from the US DOE's former uranium production facility at Fernald, Ohio. These analyses were carried out both before and after application of one of the various decontamination technologies being developed within the Integrated Demonstration. This year the program focused on characterization of the uranium speciation remaining in the soils after decontamination treatment. X-ray absorption and optical luminescence spectroscopic data were collected for approximately 40 Fernald soil samples, which were treated by one or more of the decontamination technologies

  17. Speciation of Fe in ambient aerosol and cloudwater

    Energy Technology Data Exchange (ETDEWEB)

    Siefert, Ronald Lyn [California Inst. of Technology (CalTech), Pasadena, CA (United States)

    1996-08-15

    Atmospheric iron (Fe) is thought to play an important role in cloudwater chemistry (e.g., S(IV) oxidation, oxidant production, etc.), and is also an important source of Fe to certain regions of the worlds oceans where Fe is believed to be a rate-limiting nutrient for primary productivity. This thesis focuses on understanding the chemistry, speciation and abundance of Fe in cloudwater and aerosol in the troposphere, through observations of Fe speciation in the cloudwater and aerosol samples collected over the continental United States and the Arabian Sea. Different chemical species of atmospheric Fe were measured in aerosol and cloudwater samples to help assess the role of Fe in cloudwater chemistry.

  18. Micronutrient metal speciation is driven by competitive organic chelation in grassland soils.

    Science.gov (United States)

    Boiteau, R.; Shaw, J. B.; Paša-Tolić, L.; Koppenaal, D.; Jansson, J.

    2017-12-01

    Many elements are scarcely soluble in aqueous conditions found in high pH environments, such as calcareous grassland soils, unless complexed to strong binding organic ligands. To overcome this limitation, some plants and microbes produce chelators that solubilize micronutrient metals such as Fe, Ni, Cu, and Zn from mineral phases. These complexes are taken up by organisms via specific membrane receptors, thereby differentially impacting the bioavailability of these metals to the plant and microbial community. Although the importance of these chelation strategies for individual organisms has been well established, little is known about which pathways coexist within rhizosphere microbiomes or how they interact and compete for metal binding. Identifying these metallo-organic species within natural ecosystems has remained a formidable analytical challenge due to the vast diversity of compounds and poorly defined metabolic processes in complex soil matrix. Herein, we employed recently developed liquid chromatography (LC) mass spectrometry (MS) methods to characterize the speciation of water-soluble dissolved trace elements (Fe, Ni, Cu, and Zn) from Kansas Prairie soil. Both plant and fungal chelators were identified, revealing compound-specific patterns of chelation to biologically essential metals. Numerous metabolites typically implicated in plant iron acquisition and homeostasis, including mugineic acids, deoxymugineic acid, nicotianamine, and hydroxynicotianamine, dominated the speciation of divalent metals such as Ni, Cu, and Zn (2-57 pmol / g soil). In contrast, the fungal siderophore ferricrocine bound comparatively more trivalent Fe (9pmol / g soil). These results define biochemical pathways that underpin the regulation of metals in the grassland rhizosphere. They also raise new questions about the competition of these compounds for metal binding and their bioavailability to different members of the rhizosphere population.

  19. Chromium speciation, bioavailability, uptake, toxicity and detoxification in soil-plant system: A review.

    Science.gov (United States)

    Shahid, Muhammad; Shamshad, Saliha; Rafiq, Marina; Khalid, Sana; Bibi, Irshad; Niazi, Nabeel Khan; Dumat, Camille; Rashid, Muhammad Imtiaz

    2017-07-01

    Chromium (Cr) is a potentially toxic heavy metal which does not have any essential metabolic function in plants. Various past and recent studies highlight the biogeochemistry of Cr in the soil-plant system. This review traces a plausible link among Cr speciation, bioavailability, phytouptake, phytotoxicity and detoxification based on available data, especially published from 2010 to 2016. Chromium occurs in different chemical forms (primarily as chromite (Cr(III)) and chromate (Cr(VI)) in soil which vary markedly in term of their biogeochemical behavior. Chromium behavior in soil, its soil-plant transfer and accumulation in different plant parts vary with its chemical form, plant type and soil physico-chemical properties. Soil microbial community plays a key role in governing Cr speciation and behavior in soil. Chromium does not have any specific transporter for its uptake by plants and it primarily enters the plants through specific and non-specific channels of essential ions. Chromium accumulates predominantly in plant root tissues with very limited translocation to shoots. Inside plants, Cr provokes numerous deleterious effects to several physiological, morphological, and biochemical processes. Chromium induces phytotoxicity by interfering plant growth, nutrient uptake and photosynthesis, inducing enhanced generation of reactive oxygen species, causing lipid peroxidation and altering the antioxidant activities. Plants tolerate Cr toxicity via various defense mechanisms such as complexation by organic ligands, compartmentation into the vacuole, and scavenging ROS via antioxidative enzymes. Consumption of Cr-contaminated-food can cause human health risks by inducing severe clinical conditions. Therefore, there is a dire need to monitor biogeochemical behavior of Cr in soil-plant system. Copyright © 2017 Elsevier Ltd. All rights reserved.

  20. Analysis of quantum error-correcting codes: Symplectic lattice codes and toric codes

    Science.gov (United States)

    Harrington, James William

    Quantum information theory is concerned with identifying how quantum mechanical resources (such as entangled quantum states) can be utilized for a number of information processing tasks, including data storage, computation, communication, and cryptography. Efficient quantum algorithms and protocols have been developed for performing some tasks (e.g. , factoring large numbers, securely communicating over a public channel, and simulating quantum mechanical systems) that appear to be very difficult with just classical resources. In addition to identifying the separation between classical and quantum computational power, much of the theoretical focus in this field over the last decade has been concerned with finding novel ways of encoding quantum information that are robust against errors, which is an important step toward building practical quantum information processing devices. In this thesis I present some results on the quantum error-correcting properties of oscillator codes (also described as symplectic lattice codes) and toric codes. Any harmonic oscillator system (such as a mode of light) can be encoded with quantum information via symplectic lattice codes that are robust against shifts in the system's continuous quantum variables. I show the existence of lattice codes whose achievable rates match the one-shot coherent information over the Gaussian quantum channel. Also, I construct a family of symplectic self-dual lattices and search for optimal encodings of quantum information distributed between several oscillators. Toric codes provide encodings of quantum information into two-dimensional spin lattices that are robust against local clusters of errors and which require only local quantum operations for error correction. Numerical simulations of this system under various error models provide a calculation of the accuracy threshold for quantum memory using toric codes, which can be related to phase transitions in certain condensed matter models. I also present

  1. Advanced Numerical and Theoretical Methods for Photonic Crystals and Metamaterials

    Science.gov (United States)

    Felbacq, Didier

    2016-11-01

    This book provides a set of theoretical and numerical tools useful for the study of wave propagation in metamaterials and photonic crystals. While concentrating on electromagnetic waves, most of the material can be used for acoustic (or quantum) waves. For each presented numerical method, numerical code written in MATLAB® is presented. The codes are limited to 2D problems and can be easily translated in Python or Scilab, and used directly with Octave as well.

  2. Pu speciation in actual and simulated aged wastes

    Energy Technology Data Exchange (ETDEWEB)

    Lezama-pacheco, Juan S [Los Alamos National Laboratory; Conradson, Steven D [Los Alamos National Laboratory

    2008-01-01

    X-ray Absorption Fine Structure Spectroscopy (XAFS) at the Pu L{sub II/III} edge was used to determine the speciation of this element in (1) Hanford Z-9 Pu crib samples, (2) deteriorated waste resins from a chloride process ion-exchange purification line, and (3) the sediments from two Waste Isolation Pilot Plant Liter Scale simulant brine systems. The Pu speciation in all of these samples except one is within the range previously displayed by PuO{sub 2+x-2y}(OH){sub y}{center_dot}zH{sub 2}O compounds, which is expected based on the putative thermodynamic stability of this system for Pu equilibrated with excess H{sub 2}O and O{sub 2} under environmental conditions. The primary exception was a near neutral brine experiment that displayed evidence for partial substitution of the normal O-based ligands with Cl{sup -} and a concomitant expansion of the Pu-Pu distance relative to the much more highly ordered Pu near neighbor shell in PuO{sub 2}. However, although the Pu speciation was not necessarily unusual, the Pu chemistry identified via the history of these samples did exhibit unexpected patterns, the most significant of which may be that the presence of the Pu(V)-oxo species may decrease rather than increase the overall solubility of these compounds. Several additional aspects of the Pu speciation have also not been previously observed in laboratory-based samples. The molecular environmental chemistry of Pu is therefore likely to be more complicated than would be predicted based solely on the behavior of PuO{sub 2} under laboratory conditions.

  3. Speciation and gene flow between snails of opposite chirality.

    Directory of Open Access Journals (Sweden)

    Angus Davison

    2005-09-01

    Full Text Available Left-right asymmetry in snails is intriguing because individuals of opposite chirality are either unable to mate or can only mate with difficulty, so could be reproductively isolated from each other. We have therefore investigated chiral evolution in the Japanese land snail genus Euhadra to understand whether changes in chirality have promoted speciation. In particular, we aimed to understand the effect of the maternal inheritance of chirality on reproductive isolation and gene flow. We found that the mitochondrial DNA phylogeny of Euhadra is consistent with a single, relatively ancient evolution of sinistral species and suggests either recent "single-gene speciation" or gene flow between chiral morphs that are unable to mate. To clarify the conditions under which new chiral morphs might evolve and whether single-gene speciation can occur, we developed a mathematical model that is relevant to any maternal-effect gene. The model shows that reproductive character displacement can promote the evolution of new chiral morphs, tending to counteract the positive frequency-dependent selection that would otherwise drive the more common chiral morph to fixation. This therefore suggests a general mechanism as to how chiral variation arises in snails. In populations that contain both chiral morphs, two different situations are then possible. In the first, gene flow is substantial between morphs even without interchiral mating, because of the maternal inheritance of chirality. In the second, reproductive isolation is possible but unstable, and will also lead to gene flow if intrachiral matings occasionally produce offspring with the opposite chirality. Together, the results imply that speciation by chiral reversal is only meaningful in the context of a complex biogeographical process, and so must usually involve other factors. In order to understand the roles of reproductive character displacement and gene flow in the chiral evolution of Euhadra, it will be

  4. SOME SPECIATION STUDIES IN FOODSTUFF BY ATOMIC ABSORPTION SPECTROMETRY

    OpenAIRE

    Gücer, S

    2000-01-01

    There has been increasing interest in speciation studies of essentialelements in foods. The main limitation of this studies, their levels in foodsamples and the difficulties for the determination in their own differentforms without any changes in their original forms.Atomic Absorption Spectrometry (AAS) coupled with separation methodswould be outline in this presentation. Analytical scheme was given for tea, olive and garlic samples forManganese, Magnesium and Selenium respectively. Activated...

  5. Speciation of cadmium mixed ligand complexes in salt water lakes ...

    African Journals Online (AJOL)

    The experimentally determined shifts in half-wave potentials are used to compute several formation constants. At the natural [CO32-] of 0.5 M in the lake, the main contributor to the speciation of cadmium is [Cd(CO3Cl2)]2-. At high [Cd2+], the DPASV detects the presence of free Cd2+ ions, hence, potential polluting effect, ...

  6. Zebra: An advanced PWR lattice code

    International Nuclear Information System (INIS)

    Cao, L.; Wu, H.; Zheng, Y.

    2012-01-01

    This paper presents an overview of an advanced PWR lattice code ZEBRA developed at NECP laboratory in Xi'an Jiaotong Univ.. The multi-group cross-section library is generated from the ENDF/B-VII library by NJOY and the 361-group SHEM structure is employed. The resonance calculation module is developed based on sub-group method. The transport solver is Auto-MOC code, which is a self-developed code based on the Method of Characteristic and the customization of AutoCAD software. The whole code is well organized in a modular software structure. Some numerical results during the validation of the code demonstrate that this code has a good precision and a high efficiency. (authors)

  7. Zebra: An advanced PWR lattice code

    Energy Technology Data Exchange (ETDEWEB)

    Cao, L.; Wu, H.; Zheng, Y. [School of Nuclear Science and Technology, Xi' an Jiaotong Univ., No. 28, Xianning West Road, Xi' an, ShannXi, 710049 (China)

    2012-07-01

    This paper presents an overview of an advanced PWR lattice code ZEBRA developed at NECP laboratory in Xi'an Jiaotong Univ.. The multi-group cross-section library is generated from the ENDF/B-VII library by NJOY and the 361-group SHEM structure is employed. The resonance calculation module is developed based on sub-group method. The transport solver is Auto-MOC code, which is a self-developed code based on the Method of Characteristic and the customization of AutoCAD software. The whole code is well organized in a modular software structure. Some numerical results during the validation of the code demonstrate that this code has a good precision and a high efficiency. (authors)

  8. Vector Network Coding

    OpenAIRE

    Ebrahimi, Javad; Fragouli, Christina

    2010-01-01

    We develop new algebraic algorithms for scalar and vector network coding. In vector network coding, the source multicasts information by transmitting vectors of length L, while intermediate nodes process and combine their incoming packets by multiplying them with L X L coding matrices that play a similar role as coding coefficients in scalar coding. Our algorithms for scalar network jointly optimize the employed field size while selecting the coding coefficients. Similarly, for vector co...

  9. Entropy Coding in HEVC

    OpenAIRE

    Sze, Vivienne; Marpe, Detlev

    2014-01-01

    Context-Based Adaptive Binary Arithmetic Coding (CABAC) is a method of entropy coding first introduced in H.264/AVC and now used in the latest High Efficiency Video Coding (HEVC) standard. While it provides high coding efficiency, the data dependencies in H.264/AVC CABAC make it challenging to parallelize and thus limit its throughput. Accordingly, during the standardization of entropy coding for HEVC, both aspects of coding efficiency and throughput were considered. This chapter describes th...

  10. Generalized concatenated quantum codes

    International Nuclear Information System (INIS)

    Grassl, Markus; Shor, Peter; Smith, Graeme; Smolin, John; Zeng Bei

    2009-01-01

    We discuss the concept of generalized concatenated quantum codes. This generalized concatenation method provides a systematical way for constructing good quantum codes, both stabilizer codes and nonadditive codes. Using this method, we construct families of single-error-correcting nonadditive quantum codes, in both binary and nonbinary cases, which not only outperform any stabilizer codes for finite block length but also asymptotically meet the quantum Hamming bound for large block length.

  11. Rateless feedback codes

    DEFF Research Database (Denmark)

    Sørensen, Jesper Hemming; Koike-Akino, Toshiaki; Orlik, Philip

    2012-01-01

    This paper proposes a concept called rateless feedback coding. We redesign the existing LT and Raptor codes, by introducing new degree distributions for the case when a few feedback opportunities are available. We show that incorporating feedback to LT codes can significantly decrease both...... the coding overhead and the encoding/decoding complexity. Moreover, we show that, at the price of a slight increase in the coding overhead, linear complexity is achieved with Raptor feedback coding....

  12. Speciation, in the nuclear fuel cycle by spectroscopic techniques

    International Nuclear Information System (INIS)

    Colette, S.; Plancque, G.; Allain, F.; Lamouroux, C.; Steiner, V.; Amekraz, B.; Moulin, C.

    2000-01-01

    New analytical techniques allowing to perform speciation in the framework of the nuclear fuel cycle are more and more needed. They have to be selective (since matrix encountered are very complex), sensitive (in order to work at representative concentration and below solubility limit), as well as non intrusive (in order to keep the image of the real solution). Among them, laser-based analytical techniques present these advantages together with the possibility to perform remote measurements via fiber optics. Hence, Time-Resolved Laser-Induced Fluorescence (TRLIF) has been used for actinides/lanthanides interaction and speciation studies in inorganic and organic matrices from the reprocessing to waste storage. Moreover, new ion detection methods such as Electro-Spray - Mass Spectrometry (ES-MS) seems promising for speciation studies. Hence, it is the first time that it is possible to directly couple a liquid at atmospheric pressure to a mass detection working at reduced pressure with a soft mode of ionisation that should allow to give informations on chemical species present. Principle, advantages and limitations as well as results obtained with the use of TRLIF and ES-MS on different systems of interest including actinides, lanthanides, fission products in interaction with simple organic molecules to very complex structure will be presented and discussed. (authors)

  13. Speciation, in the nuclear fuel cycle by spectroscopic techniques

    Energy Technology Data Exchange (ETDEWEB)

    Colette, S.; Plancque, G.; Allain, F.; Lamouroux, C.; Steiner, V.; Amekraz, B.; Moulin, C. [CEA/Saclay, Dept, des Procedes d' Enrichissement (DPE), 91 - Gif-sur-Yvette (France)

    2000-07-01

    New analytical techniques allowing to perform speciation in the framework of the nuclear fuel cycle are more and more needed. They have to be selective (since matrix encountered are very complex), sensitive (in order to work at representative concentration and below solubility limit), as well as non intrusive (in order to keep the image of the real solution). Among them, laser-based analytical techniques present these advantages together with the possibility to perform remote measurements via fiber optics. Hence, Time-Resolved Laser-Induced Fluorescence (TRLIF) has been used for actinides/lanthanides interaction and speciation studies in inorganic and organic matrices from the reprocessing to waste storage. Moreover, new ion detection methods such as Electro-Spray - Mass Spectrometry (ES-MS) seems promising for speciation studies. Hence, it is the first time that it is possible to directly couple a liquid at atmospheric pressure to a mass detection working at reduced pressure with a soft mode of ionisation that should allow to give informations on chemical species present. Principle, advantages and limitations as well as results obtained with the use of TRLIF and ES-MS on different systems of interest including actinides, lanthanides, fission products in interaction with simple organic molecules to very complex structure will be presented and discussed. (authors)

  14. Metal accumulation by stream bryophytes, related to chemical speciation

    Energy Technology Data Exchange (ETDEWEB)

    Tipping, E. [Centre for Ecology and Hydrology, Lancaster Environment Centre, Library Avenue, Bailrigg, Lancaster LA1 4AP (United Kingdom)], E-mail: et@ceh.ac.uk; Vincent, C.D.; Lawlor, A.J.; Lofts, S. [Centre for Ecology and Hydrology, Lancaster Environment Centre, Library Avenue, Bailrigg, Lancaster LA1 4AP (United Kingdom)

    2008-12-15

    Metal accumulation by aquatic bryophytes was investigated using data for headwater streams of differing chemistry. The Windermere Humic Aqueous Model (WHAM) was applied to calculate chemical speciation, including competitive proton and metal interactions with external binding sites on the plants. The speciation modelling approach gives smaller deviations between observed and predicted bryophyte contents of Cu, Zn, Cd and Pb than regressions based on total filtered metal concentrations. If all four metals, and Ni, are considered together, the WHAM predictions are superior at the 1% level. Optimised constants for bryophyte binding by the trace metals are similar to those for humic substances and simple carboxylate ligands. Bryophyte contents of Na, Mg and Ca are approximately explained by binding at external sites, while most of the K is intracellular. Oxide phases account for some of the Al, and most of the Mn, Fe and Co. - Speciation modelling can be used to interpret the accumulation of Ni, Cu, Zn, Cd and Pb by bryophytes, supporting its use to quantify trace metal bioavailability in the field.

  15. The role of male contest competition over mates in speciation

    Directory of Open Access Journals (Sweden)

    Anna QVARNSTRÖM, Niclas VALLIN, Andreas RUDH

    2012-06-01

    Full Text Available Research on the role of sexual selection in the speciation process largely focuses on the diversifying role of mate choice. In particular, much attention has been drawn to the fact that population divergence in mate choice and in the male traits subject to choice directly can lead to assortative mating. However, male contest competition over mates also constitutes an important mechanism of sexual selection. We review recent empirical studies and argue that sexual selection through male contest competition can affect speciation in ways other than mate choice. For example, biases in aggression towards similar competitors can lead to disruptive and negative frequency-dependent selection on the traits used in contest competition in a similar way as competition for other types of limited resources. Moreover, male contest abilities often trade-off against other abilities such as parasite resistance, protection against predators and general stress tolerance. Populations experiencing different ecological conditions should therefore quickly diverge non-randomly in a number of traits including male contest abilities. In resource based breeding systems, a feedback loop between competitive ability and habitat use may lead to further population divergence. We discuss how population divergence in traits used in male contest competition can lead to the build up of reproductive isolation through a number of different pathways. Our main conclusion is that the role of male contest competition in speciation remains largely scientifically unexplored [Current Zoology 58 (3: 490–506, 2012].

  16. Advanced video coding systems

    CERN Document Server

    Gao, Wen

    2015-01-01

    This comprehensive and accessible text/reference presents an overview of the state of the art in video coding technology. Specifically, the book introduces the tools of the AVS2 standard, describing how AVS2 can help to achieve a significant improvement in coding efficiency for future video networks and applications by incorporating smarter coding tools such as scene video coding. Topics and features: introduces the basic concepts in video coding, and presents a short history of video coding technology and standards; reviews the coding framework, main coding tools, and syntax structure of AV

  17. Coding for dummies

    CERN Document Server

    Abraham, Nikhil

    2015-01-01

    Hands-on exercises help you learn to code like a pro No coding experience is required for Coding For Dummies,your one-stop guide to building a foundation of knowledge inwriting computer code for web, application, and softwaredevelopment. It doesn't matter if you've dabbled in coding or neverwritten a line of code, this book guides you through the basics.Using foundational web development languages like HTML, CSS, andJavaScript, it explains in plain English how coding works and whyit's needed. Online exercises developed by Codecademy, a leading online codetraining site, help hone coding skill

  18. Atmospheric speciation of mercury in two contrasting Southeastern US airsheds

    Science.gov (United States)

    Gabriel, Mark C.; Williamson, Derek G.; Brooks, Steve; Lindberg, Steve

    Simultaneous measurement of gaseous elemental, reactive gaseous, and fine particulate mercury took place in Tuscaloosa AL, (urban airshed) and Cove Mountain, TN (non-urban airshed) during the summers of 2002 and 2003. The objective of this research was to (1) summarize the temporal distribution of each mercury specie at each site and compare to other speciation data sets developed by other researchers and (2) provide insight into urban and non-urban mercury speciation effects using various statistical methods. Average specie concentrations were as follows: 4.05 ng m -3 (GEM), 13.6 pg m -3 (RGM), 16.4 pg m -3 (Hg-p) for Tuscaloosa; 3.20 ng m -3 (GEM), 13.6 pg m -3 (RGM), 9.73 pg m -3 (Hg-p) for Cove Mountain. As a result of urban airshed impacts, short periods of high concentration for all mercury species was common in Tuscaloosa. At Cove Mountain a consistent mid-day rise and evening drop for mercury species was found. This pattern was primarily the result of un-impacted physical boundary layer movement, although, other potential impacts were ambient photochemistry and air-surface exchange of mercury. Meteorological parameters that are known to heavily impact mercury speciation were similar for the study period for Tuscaloosa and Cove Mountain except for wind speed (m s -1), which was higher at Cove Mountain. For both sites statistically significant ( p<0.0001), inverse relationships existed between wind speed and Hg 0 concentration. A weaker windspeed-Hg 0 correlation existed for Tuscaloosa. By analyzing Hg concentration—wind speed magnitude change at both sites it was found that wind speed at Cove Mountain had a greater influence on Hg 0 concentration variability than Tuscaloosa by a factor of 3. Using various statistical tests, we concluded that the nature of Tuscaloosa's atmospheric mercury speciation was the result of typical urban airshed impacts. Cove Mountain showed atmospheric mercury speciation characteristics indicative of a non-urban area along with

  19. Implementation of standard testbeds for numerical relativity

    Energy Technology Data Exchange (ETDEWEB)

    Babiuc, M C [Department of Physics and Physical Science, Marshall University, Huntington, WV 25755 (United States); Husa, S [Friedrich Schiller University Jena, Max-Wien-Platz 1, 07743 Jena (Germany); Alic, D [Department of Physics, University of the Balearic Islands, Cra Valldemossa km 7.5, 07122 Palma de Mallorca (Spain); Hinder, I [Center for Gravitational Wave Physics, Pennsylvania State University, University Park, PA 16802 (United States); Lechner, C [Weierstrass Institute for Applied Analysis and Stochastics (WIAS), Mohrenstrasse 39, 10117 Berlin (Germany); Schnetter, E [Center for Computation and Technology, 216 Johnston Hall, Louisiana State University, Baton Rouge, LA 70803 (United States); Szilagyi, B; Dorband, N; Pollney, D; Winicour, J [Max-Planck-Institut fuer Gravitationsphysik (Albert-Einstein-Institut), Am Muehlenberg 1, 14076 Golm (Germany); Zlochower, Y [Center for Computational Relativity and Gravitation, School of Mathematical Sciences, Rochester Institute of Technology, 78 Lomb Memorial Drive, Rochester, New York 14623 (United States)

    2008-06-21

    We discuss results that have been obtained from the implementation of the initial round of testbeds for numerical relativity which was proposed in the first paper of the Apples with Apples Alliance. We present benchmark results for various codes which provide templates for analyzing the testbeds and to draw conclusions about various features of the codes. This allows us to sharpen the initial test specifications, design a new test and add theoretical insight.

  20. Numerical and modeling techniques used in the EPIC code

    International Nuclear Information System (INIS)

    Pizzica, P.A.; Abramson, P.B.

    1977-01-01

    EPIC models fuel and coolant motion which result from internal fuel pin pressure (from fission gas or fuel vapor) and/or from the generation of sodium vapor pressures in the coolant channel subsequent to pin failure in an LMFBR. The modeling includes the ejection of molten fuel from the pin into a coolant channel with any amount of voiding through a clad rip which may be of any length or which may expand with time. One-dimensional Eulerian hydrodynamics is used to model both the motion of fuel and fission gas inside a molten fuel cavity and the mixture of two-phase sodium and fission gas in the channel. Motion of molten fuel particles in the coolant channel is tracked with a particle-in-cell technique

  1. Generic programming for deterministic neutron transport codes

    International Nuclear Information System (INIS)

    Plagne, L.; Poncot, A.

    2005-01-01

    This paper discusses the implementation of neutron transport codes via generic programming techniques. Two different Boltzmann equation approximations have been implemented, namely the Sn and SPn methods. This implementation experiment shows that generic programming allows us to improve maintainability and readability of source codes with no performance penalties compared to classical approaches. In the present implementation, matrices and vectors as well as linear algebra algorithms are treated separately from the rest of source code and gathered in a tool library called 'Generic Linear Algebra Solver System' (GLASS). Such a code architecture, based on a linear algebra library, allows us to separate the three different scientific fields involved in transport codes design: numerical analysis, reactor physics and computer science. Our library handles matrices with optional storage policies and thus applies both to Sn code, where the matrix elements are computed on the fly, and to SPn code where stored matrices are used. Thus, using GLASS allows us to share a large fraction of source code between Sn and SPn implementations. Moreover, the GLASS high level of abstraction allows the writing of numerical algorithms in a form which is very close to their textbook descriptions. Hence the GLASS algorithms collection, disconnected from computer science considerations (e.g. storage policy), is very easy to read, to maintain and to extend. (authors)

  2. Sandia National Laboratories analysis code data base

    Energy Technology Data Exchange (ETDEWEB)

    Peterson, C.W.

    1994-11-01

    Sandia National Laboratories, mission is to solve important problems in the areas of national defense, energy security, environmental integrity, and industrial technology. The Laboratories` strategy for accomplishing this mission is to conduct research to provide an understanding of the important physical phenomena underlying any problem, and then to construct validated computational models of the phenomena which can be used as tools to solve the problem. In the course of implementing this strategy, Sandia`s technical staff has produced a wide variety of numerical problem-solving tools which they use regularly in the design, analysis, performance prediction, and optimization of Sandia components, systems and manufacturing processes. This report provides the relevant technical and accessibility data on the numerical codes used at Sandia, including information on the technical competency or capability area that each code addresses, code ``ownership`` and release status, and references describing the physical models and numerical implementation.

  3. Sandia National Laboratories analysis code data base

    Science.gov (United States)

    Peterson, C. W.

    1994-11-01

    Sandia National Laboratories' mission is to solve important problems in the areas of national defense, energy security, environmental integrity, and industrial technology. The laboratories' strategy for accomplishing this mission is to conduct research to provide an understanding of the important physical phenomena underlying any problem, and then to construct validated computational models of the phenomena which can be used as tools to solve the problem. In the course of implementing this strategy, Sandia's technical staff has produced a wide variety of numerical problem-solving tools which they use regularly in the design, analysis, performance prediction, and optimization of Sandia components, systems, and manufacturing processes. This report provides the relevant technical and accessibility data on the numerical codes used at Sandia, including information on the technical competency or capability area that each code addresses, code 'ownership' and release status, and references describing the physical models and numerical implementation.

  4. The importance of element speciation in water analysis - a plea for further investigations

    International Nuclear Information System (INIS)

    Frimmel, F.H.; Gremm, T.

    1994-01-01

    Water analysis is dominated by parameters given in laws and recommendations concerning water quality. Speciation has been broadly neglected. This might be due to the difficulties in defining speciation and in determining species at low concentrations. This paper addresses the physical, chemical and biological approaches to speciation and gives examples for methods which are suited for species determination in aquatic systems. Metals and non-metallic elements are covered as well. It is obvious that speciation is a key for understanding the function of aquatic ecosystems and their technical utilization. (orig.)

  5. NORTICA - a new code for cyclotron analysis

    International Nuclear Information System (INIS)

    Gorelov, D.; Johnson, D.; Marti, F.

    2001-01-01

    The new package NORTICA (Numerical ORbit Tracking In Cyclotrons with Analysis) of computer codes for beam dynamics simulations is under development at NSCL. The package was started as a replacement for the code MONSTER developed in the laboratory in the past. The new codes are capable of beam dynamics simulations in both CCF (Coupled Cyclotron Facility) accelerators, the K500 and K1200 superconducting cyclotrons. The general purpose of this package is assisting in setting and tuning the cyclotrons taking into account the main field and extraction channel imperfections. The computer platform for the package is Alpha Station with UNIX operating system and X-Windows graphic interface. A multiple programming language approach was used in order to combine the reliability of the numerical algorithms developed over the long period of time in the laboratory and the friendliness of modern style user interface. This paper describes the capability and features of the codes in the present state

  6. BeerOz, a set of Matlab routines for the quantitative interpretation of spectrophotometric measurements of metal speciation in solution

    Science.gov (United States)

    Brugger, Joël

    2007-02-01

    The modelling of the speciation and mobility of metals under surface and hydrothermal conditions relies on the availability of accurate thermodynamic properties for all relevant minerals, aqueous species, gases and surface species. Spectroscopic techniques obeying the Beer-Lambert law can be used to obtain thermodynamic properties for reactions among aqueous species (e.g., ligand substitution; protonation). BeerOz is a set of Matlab routines designed to perform both qualitative and quantitative analysis of spectroscopic data following the Beer-Lambert law. BeerOz is modular and can be customised for particular experimental strategies or for simultaneous refinement of several datasets obtained using different techniques. Distribution of species calculations are performed using an implementation of the EQBRM code, which allows for customised activity coefficient calculations. BeerOz also contains routines to study the n-dimensional solution space, in order to provide realistic estimates of errors and test for the existence of multiple local minima and correlation between the different refined variables. The paper reviews the physical principles underlying the qualitative and quantitative analysis of spectroscopic data collected on aqueous speciation, in particular for studying successive ligand replacement reactions, and presents the non-linear least-squares algorithm implemented in BeerOz. The discussion is illustrated using UV-Vis spectra collected on acidic Fe(III) solutions containing varying LiCl concentrations, and showing the change from the hexaaquo Fe(H 2O) 63+ complex to the tetrahedral FeCl 4- complex.

  7. Assessment of solubility and speciation of U, Pu, Np, and Th in natural groundwaters: theory, thermodynamic data, and primary applications

    Energy Technology Data Exchange (ETDEWEB)

    Schweingruber, M

    1981-11-01

    The computer code MINEQL was adapted and extended to assess the solubility and speciation of radioactive waste nuclides in groundwaters under conditions which are expected to exist in the surroundings of planned underground repositories. By means of an additional data base including standard reaction enthalpies and heat capacities at 25/sup 0/C, the relevant equilibrium constants at 25/sup 0/C can be converted to other temperatures using Ulich's formulae. The activitiy coefficients for dissolved species are modelled with a temperature dependent function of the Davies' approximation type. The report is segmented in three main parts: (1) a review of the MINEQL fundamentals and a summary of the theory needed for the extensions; (2) an outline of the general program structure and of criteria applied to the selection of thermodynamic data; (3) a discussion of the results from first model applications to evaluate the solubility and speciation of U, Pu, Np and Th in two Swiss groundwaters, based either on the approach of negligible chemical disturbance or on a solid/solution titration concept. All thermodynamic data involved in this study are collected in an appendix, together with a compilation of references.

  8. Discussion on LDPC Codes and Uplink Coding

    Science.gov (United States)

    Andrews, Ken; Divsalar, Dariush; Dolinar, Sam; Moision, Bruce; Hamkins, Jon; Pollara, Fabrizio

    2007-01-01

    This slide presentation reviews the progress that the workgroup on Low-Density Parity-Check (LDPC) for space link coding. The workgroup is tasked with developing and recommending new error correcting codes for near-Earth, Lunar, and deep space applications. Included in the presentation is a summary of the technical progress of the workgroup. Charts that show the LDPC decoder sensitivity to symbol scaling errors are reviewed, as well as a chart showing the performance of several frame synchronizer algorithms compared to that of some good codes and LDPC decoder tests at ESTL. Also reviewed is a study on Coding, Modulation, and Link Protocol (CMLP), and the recommended codes. A design for the Pseudo-Randomizer with LDPC Decoder and CRC is also reviewed. A chart that summarizes the three proposed coding systems is also presented.

  9. Fluid dynamics theory, computation, and numerical simulation

    CERN Document Server

    Pozrikidis, C

    2001-01-01

    Fluid Dynamics Theory, Computation, and Numerical Simulation is the only available book that extends the classical field of fluid dynamics into the realm of scientific computing in a way that is both comprehensive and accessible to the beginner The theory of fluid dynamics, and the implementation of solution procedures into numerical algorithms, are discussed hand-in-hand and with reference to computer programming This book is an accessible introduction to theoretical and computational fluid dynamics (CFD), written from a modern perspective that unifies theory and numerical practice There are several additions and subject expansions in the Second Edition of Fluid Dynamics, including new Matlab and FORTRAN codes Two distinguishing features of the discourse are solution procedures and algorithms are developed immediately after problem formulations are presented, and numerical methods are introduced on a need-to-know basis and in increasing order of difficulty Matlab codes are presented and discussed for a broad...

  10. Fluid Dynamics Theory, Computation, and Numerical Simulation

    CERN Document Server

    Pozrikidis, Constantine

    2009-01-01

    Fluid Dynamics: Theory, Computation, and Numerical Simulation is the only available book that extends the classical field of fluid dynamics into the realm of scientific computing in a way that is both comprehensive and accessible to the beginner. The theory of fluid dynamics, and the implementation of solution procedures into numerical algorithms, are discussed hand-in-hand and with reference to computer programming. This book is an accessible introduction to theoretical and computational fluid dynamics (CFD), written from a modern perspective that unifies theory and numerical practice. There are several additions and subject expansions in the Second Edition of Fluid Dynamics, including new Matlab and FORTRAN codes. Two distinguishing features of the discourse are: solution procedures and algorithms are developed immediately after problem formulations are presented, and numerical methods are introduced on a need-to-know basis and in increasing order of difficulty. Matlab codes are presented and discussed for ...

  11. Locally orderless registration code

    DEFF Research Database (Denmark)

    2012-01-01

    This is code for the TPAMI paper "Locally Orderless Registration". The code requires intel threadding building blocks installed and is provided for 64 bit on mac, linux and windows.......This is code for the TPAMI paper "Locally Orderless Registration". The code requires intel threadding building blocks installed and is provided for 64 bit on mac, linux and windows....

  12. Decoding Codes on Graphs

    Indian Academy of Sciences (India)

    Shannon limit of the channel. Among the earliest discovered codes that approach the. Shannon limit were the low density parity check (LDPC) codes. The term low density arises from the property of the parity check matrix defining the code. We will now define this matrix and the role that it plays in decoding. 2. Linear Codes.

  13. Manually operated coded switch

    International Nuclear Information System (INIS)

    Barnette, J.H.

    1978-01-01

    The disclosure related to a manually operated recodable coded switch in which a code may be inserted, tried and used to actuate a lever controlling an external device. After attempting a code, the switch's code wheels must be returned to their zero positions before another try is made

  14. Performance measures for transform data coding.

    Science.gov (United States)

    Pearl, J.; Andrews, H. C.; Pratt, W. K.

    1972-01-01

    This paper develops performance criteria for evaluating transform data coding schemes under computational constraints. Computational constraints that conform with the proposed basis-restricted model give rise to suboptimal coding efficiency characterized by a rate-distortion relation R(D) similar in form to the theoretical rate-distortion function. Numerical examples of this performance measure are presented for Fourier, Walsh, Haar, and Karhunen-Loeve transforms.

  15. Modified PARMILA code for new accelerating structures

    International Nuclear Information System (INIS)

    Takeda, H.; Stovall, J.E.

    1995-01-01

    The PARMILA code was originally developed as a numerical tool to design and simulate the beam performance of the drift-tube linac (DTL). The authors have extended PARMILA to the design of both the coupled-cavity linac (CCL) and the coupled-cavity drift-tube linac (CCDTL). They describe the new design and simulation features associated with these linac structures and improvements to the code that facilitate a seamless linac design process

  16. Joint design of QC-LDPC codes for coded cooperation system with joint iterative decoding

    Science.gov (United States)

    Zhang, Shunwai; Yang, Fengfan; Tang, Lei; Ejaz, Saqib; Luo, Lin; Maharaj, B. T.

    2016-03-01

    In this paper, we investigate joint design of quasi-cyclic low-density-parity-check (QC-LDPC) codes for coded cooperation system with joint iterative decoding in the destination. First, QC-LDPC codes based on the base matrix and exponent matrix are introduced, and then we describe two types of girth-4 cycles in QC-LDPC codes employed by the source and relay. In the equivalent parity-check matrix corresponding to the jointly designed QC-LDPC codes employed by the source and relay, all girth-4 cycles including both type I and type II are cancelled. Theoretical analysis and numerical simulations show that the jointly designed QC-LDPC coded cooperation well combines cooperation gain and channel coding gain, and outperforms the coded non-cooperation under the same conditions. Furthermore, the bit error rate performance of the coded cooperation employing jointly designed QC-LDPC codes is better than those of random LDPC codes and separately designed QC-LDPC codes over AWGN channels.

  17. Coding in Muscle Disease.

    Science.gov (United States)

    Jones, Lyell K; Ney, John P

    2016-12-01

    Accurate coding is critically important for clinical practice and research. Ongoing changes to diagnostic and billing codes require the clinician to stay abreast of coding updates. Payment for health care services, data sets for health services research, and reporting for medical quality improvement all require accurate administrative coding. This article provides an overview of administrative coding for patients with muscle disease and includes a case-based review of diagnostic and Evaluation and Management (E/M) coding principles in patients with myopathy. Procedural coding for electrodiagnostic studies and neuromuscular ultrasound is also reviewed.

  18. Analytical validation of the CACECO containment analysis code

    International Nuclear Information System (INIS)

    Peak, R.D.

    1979-08-01

    The CACECO containment analysis code was developed to predict the thermodynamic responses of LMFBR containment facilities to a variety of accidents. This report covers the verification of the CACECO code by problems that can be solved by hand calculations or by reference to textbook and literature examples. The verification concentrates on the accuracy of the material and energy balances maintained by the code and on the independence of the four cells analyzed by the code so that the user can be assured that the code analyses are numerically correct and independent of the organization of the input data submitted to the code

  19. Numerical aerodynamic simulation (NAS)

    International Nuclear Information System (INIS)

    Peterson, V.L.; Ballhaus, W.F. Jr.; Bailey, F.R.

    1984-01-01

    The Numerical Aerodynamic Simulation (NAS) Program is designed to provide a leading-edge computational capability to the aerospace community. It was recognized early in the program that, in addition to more advanced computers, the entire computational process ranging from problem formulation to publication of results needed to be improved to realize the full impact of computational aerodynamics. Therefore, the NAS Program has been structured to focus on the development of a complete system that can be upgraded periodically with minimum impact on the user and on the inventory of applications software. The implementation phase of the program is now under way. It is based upon nearly 8 yr of study and should culminate in an initial operational capability before 1986. The objective of this paper is fivefold: 1) to discuss the factors motivating the NAS program, 2) to provide a history of the activity, 3) to describe each of the elements of the processing-system network, 4) to outline the proposed allocation of time to users of the facility, and 5) to describe some of the candidate problems being considered for the first benchmark codes

  20. QR Codes 101

    Science.gov (United States)

    Crompton, Helen; LaFrance, Jason; van 't Hooft, Mark

    2012-01-01

    A QR (quick-response) code is a two-dimensional scannable code, similar in function to a traditional bar code that one might find on a product at the supermarket. The main difference between the two is that, while a traditional bar code can hold a maximum of only 20 digits, a QR code can hold up to 7,089 characters, so it can contain much more…

  1. Numerical studies of impurities in fusion plasmas

    International Nuclear Information System (INIS)

    Hulse, R.A.

    1982-09-01

    The coupled partial differential equations used to describe the behavior of impurity ions in magnetically confined controlled fusion plasmas require numerical solution for cases of practical interest. Computer codes developed for impurity modeling at the Princeton Plasma Physics Laboratory are used as examples of the types of codes employed for this purpose. These codes solve for the impurity ionization state densities and associated radiation rates using atomic physics appropriate for these low-density, high-temperature plasmas. The simpler codes solve local equations in zero spatial dimensions while more complex cases require codes which explicitly include transport of the impurity ions simultaneously with the atomic processes of ionization and recombination. Typical applications are discussed and computational results are presented for selected cases of interest

  2. Opportunistic Adaptive Transmission for Network Coding Using Nonbinary LDPC Codes

    Directory of Open Access Journals (Sweden)

    Cocco Giuseppe

    2010-01-01

    Full Text Available Network coding allows to exploit spatial diversity naturally present in mobile wireless networks and can be seen as an example of cooperative communication at the link layer and above. Such promising technique needs to rely on a suitable physical layer in order to achieve its best performance. In this paper, we present an opportunistic packet scheduling method based on physical layer considerations. We extend channel adaptation proposed for the broadcast phase of asymmetric two-way bidirectional relaying to a generic number of sinks and apply it to a network context. The method consists of adapting the information rate for each receiving node according to its channel status and independently of the other nodes. In this way, a higher network throughput can be achieved at the expense of a slightly higher complexity at the transmitter. This configuration allows to perform rate adaptation while fully preserving the benefits of channel and network coding. We carry out an information theoretical analysis of such approach and of that typically used in network coding. Numerical results based on nonbinary LDPC codes confirm the effectiveness of our approach with respect to previously proposed opportunistic scheduling techniques.

  3. Extensive range overlap between heliconiine sister species: evidence for sympatric speciation in butterflies?

    Science.gov (United States)

    Rosser, Neil; Kozak, Krzysztof M; Phillimore, Albert B; Mallet, James

    2015-06-30

    Sympatric speciation is today generally viewed as plausible, and some well-supported examples exist, but its relative contribution to biodiversity remains to be established. We here quantify geographic overlap of sister species of heliconiine butterflies, and use age-range correlations and spatial simulations of the geography of speciation to infer the frequency of sympatric speciation. We also test whether shifts in mimetic wing colour pattern, host plant use and climate niche play a role in speciation, and whether such shifts are associated with sympatry. Approximately a third of all heliconiine sister species pairs exhibit near complete range overlap, and analyses of the observed patterns of range overlap suggest that sympatric speciation contributes 32%-95% of speciation events. Müllerian mimicry colour patterns and host plant choice are highly labile traits that seem to be associated with speciation, but we find no association between shifts in these traits and range overlap. In contrast, climatic niches of sister species are more conserved. Unlike birds and mammals, sister species of heliconiines are often sympatric and our inferences using the most recent comparative methods suggest that sympatric speciation is common. However, if sister species spread rapidly into sympatry (e.g. due to their similar climatic niches), then assumptions underlying our methods would be violated. Furthermore, although we find some evidence for the role of ecology in speciation, ecological shifts did not show the associations with range overlap expected under sympatric speciation. We delimit species of heliconiines in three different ways, based on "strict and " "relaxed" biological species concepts (BSC), as well as on a surrogate for the widely-used "diagnostic" version of the phylogenetic species concept (PSC). We show that one reason why more sympatric speciation is inferred in heliconiines than in birds may be due to a different culture of species delimitation in the two

  4. Speciation of uranium with respect to hydrogeological aspects

    International Nuclear Information System (INIS)

    Meinrath, G.

    1997-01-01

    Until 1991, eastern Germany has been third largest uranium producer in the world. After the cease of uranium production, larger areas remained contaminated by uranium mining debris, mill-tailings and mining areas. Since 1991 these areas are in the process of remediation by intervention. In Germany, legal stipulations require the prognosis of the likely mid-term impact of an intervention. The benefit of a planned remediation procedure must be evident against the Zero option (doing nothing) and alternative actions. Thermodynamic data of geochemically relevant reactions for uranium under conditions of natural aqueous solution serve as important input data into geochemical reactive transport codes. Especially hydrolysis and carbonato complexation of hexavalent uranium influence the geochemical behaviour of uranium. The first part of the report report summarizes the fundamental chemical facts on mineralogy, electronic structure, UV-Vis and emission spectroscopy of hexavalent uranium. A second part reports in depth the experimental and numerical procedures to study the hydrolytic and carbonate complexation behaviour of hexavalent uranium. The evaluation of single component spectra of the relevant uranium species is discussed. Spectral curves are quantitatively deconcoluted into single components. In all cases the associated uncertainties are given. Thermodynamic data on hydrolysis and carbonato species derived from these experiments are compared to existing data in the literature. (orig.)

  5. Electrical, instrumentation, and control codes and standards

    International Nuclear Information System (INIS)

    Kranning, A.N.

    1978-01-01

    During recent years numerous documents in the form of codes and standards have been developed and published to provide design, fabrication and construction rules and criteria applicable to instrumentation, control and power distribution facilities for nuclear power plants. The contents of this LTR were prepared by NUS Corporation under Subcontract K5108 and provide a consolidated index and listing of the documents selected for their application to procurement of materials and design of modifications and new construction at the LOFT facility. These codes and standards should be applied together with the National Electrical Code, the ID Engineering Standards and LOFT Specifications to all LOFT instrument and electrical design activities

  6. Intracoin - International Nuclide Transport Code Intercomparison Study

    International Nuclear Information System (INIS)

    1984-09-01

    The purpose of the project is to obtain improved knowledge of the influence of various strategies for radionuclide transport modelling for the safety assessment of final repositories for nuclear waste. This is a report of the first phase of the project which was devoted to a comparison of the numerical accuracy of the computer codes used in the study. The codes can be divided into five groups, namely advection-dispersion models, models including matrix diffusion and chemical effects and finally combined models. The results are presented as comparisons of calculations since the objective of level 1 was code verification. (G.B.)

  7. Development of ADINA-J-integral code

    International Nuclear Information System (INIS)

    Kurihara, Ryoichi

    1988-07-01

    A general purpose finite element program ADINA (Automatic Dynamic Incremental Nonlinear Analysis), which was developed by Bathe et al., was revised to be able to calculate the J- and J-integral. This report introduced the numerical method to add this capability to the code, and the evaluation of the revised ADINA-J code by using a few of examples of the J estimation model, i.e. a compact tension specimen, a center cracked panel subjected to dynamic load, and a thick shell cylinder having inner axial crack subjected to thermal load. The evaluation testified the function of the revised code. (author)

  8. Spatial neutron kinetic module of ROSA code

    International Nuclear Information System (INIS)

    Cherezov, A.L.; Shchukin, N.V.

    2009-01-01

    A spatial neutron kinetic module was developed for computer code ROSA. The paper describes a numerical scheme used in the module for resolving neutron kinetic equations. Analytical integration for delayed neutrons emitters method and direct numerical integration method (Gear's method) were analyzed. The two methods were compared on their efficiency and accuracy. Both methods were verified with test problems. The results obtained in the verification studies were presented [ru

  9. Speciation of Am(III)/Eu(III) sorbed on γ-alumina. Effect of metal ion concentration

    International Nuclear Information System (INIS)

    Kumar, S.; Tomar, B.S.; Godbole, S.V.

    2013-01-01

    The present paper describes the speciation of Am(III)/Eu(III) sorbed on γ-alumina, and its evolution with changing metal ion concentration, studied using batch sorption experiment, time resolved fluorescence spectroscopy (TRFS), extended X-ray absorption fine structure (EXAFS) and surface Complexation modeling (SCM). Though numerous studies exist in the literature on the speciation of trivalent actinides and lanthanides on alumina surface, the mechanism of sorption at high metal ion concentrations is not yet fully understood. Batch sorption experiments of Am(III) on γ-alumina under varying condition of pH (3-10), ionic strength (0.005-0.1 M NaClO 4 ) and metal ion concentration (10 -7 -10 -4 M) were performed. Higher metal ion concentration was achieved by the addition of Eu(III) considering it as an analogue of Am(III). Time resolved fluorescence spectroscopy (TRFS) study of Eu(III) sorbed on γ-alumina at the metal ion concentration of 5.0 x 10 -5 M was carried out over pH 4 to 7. TRFS showed the presence of two surface species, with distinctly different fluorescence decay life times. The shorter lifetime value and its changing pattern with pH indicate the surface species corresponding to this component to be monodentate species > AlOAm 2+ and its hydrolyzed forms. The sorbed Eu 3+ species corresponding to the longer lifetime value has 2-3 water molecules in its first coordination sphere and is multidentate in its binding on alumina surface. Extended X-ray absorption fine structure (EXAFS) measurement of Eu:γ-Al 2 O 3 sorption systems at pH 6.18 and 7.15 corroborate the existence of two surface complexes. Further it suggests the edge sharing bidentate binding of Eu on AlO 6 octahedra as the co-ordination mode of the higher lifetime component. Surface Complexation Modeling (SCM) of Am(III)/Eu(III) sorption onto γ-alumina at pH ≤7 has been carried out using these two surface species. 2-pK surface complexation modeling coupled with constant capacitance model

  10. Disruptive Innovation in Numerical Hydrodynamics

    Energy Technology Data Exchange (ETDEWEB)

    Waltz, Jacob I. [Los Alamos National Laboratory

    2012-09-06

    We propose the research and development of a high-fidelity hydrodynamic algorithm for tetrahedral meshes that will lead to a disruptive innovation in the numerical modeling of Laboratory problems. Our proposed innovation has the potential to reduce turnaround time by orders of magnitude relative to Advanced Simulation and Computing (ASC) codes; reduce simulation setup costs by millions of dollars per year; and effectively leverage Graphics Processing Unit (GPU) and future Exascale computing hardware. If successful, this work will lead to a dramatic leap forward in the Laboratory's quest for a predictive simulation capability.

  11. Survey Of Lossless Image Coding Techniques

    Science.gov (United States)

    Melnychuck, Paul W.; Rabbani, Majid

    1989-04-01

    Many image transmission/storage applications requiring some form of data compression additionally require that the decoded image be an exact replica of the original. Lossless image coding algorithms meet this requirement by generating a decoded image that is numerically identical to the original. Several lossless coding techniques are modifications of well-known lossy schemes, whereas others are new. Traditional Markov-based models and newer arithmetic coding techniques are applied to predictive coding, bit plane processing, and lossy plus residual coding. Generally speaking, the compression ratio offered by these techniques are in the area of 1.6:1 to 3:1 for 8-bit pictorial images. Compression ratios for 12-bit radiological images approach 3:1, as these images have less detailed structure, and hence, their higher pel correlation leads to a greater removal of image redundancy.

  12. Utility of QR codes in biological collections.

    Science.gov (United States)

    Diazgranados, Mauricio; Funk, Vicki A

    2013-01-01

    The popularity of QR codes for encoding information such as URIs has increased exponentially in step with the technological advances and availability of smartphones, digital tablets, and other electronic devices. We propose using QR codes on specimens in biological collections to facilitate linking vouchers' electronic information with their associated collections. QR codes can efficiently provide such links for connecting collections, photographs, maps, ecosystem notes, citations, and even GenBank sequences. QR codes have numerous advantages over barcodes, including their small size, superior security mechanisms, increased complexity and quantity of information, and low implementation cost. The scope of this paper is to initiate an academic discussion about using QR codes on specimens in biological collections.

  13. Utility of QR codes in biological collections

    Directory of Open Access Journals (Sweden)

    Mauricio Diazgranados

    2013-07-01

    Full Text Available The popularity of QR codes for encoding information such as URIs has increased exponentially in step with the technological advances and availability of smartphones, digital tablets, and other electronic devices. We propose using QR codes on specimens in biological collections to facilitate linking vouchers’ electronic information with their associated collections. QR codes can efficiently provide such links for connecting collections, photographs, maps, ecosystem notes, citations, and even GenBank sequences. QR codes have numerous advantages over barcodes, including their small size, superior security mechanisms, increased complexity and quantity of information, and low implementation cost. The scope of this paper is to initiate an academic discussion about using QR codes on specimens in biological collections.

  14. Codes and curves

    CERN Document Server

    Walker, Judy L

    2000-01-01

    When information is transmitted, errors are likely to occur. Coding theory examines efficient ways of packaging data so that these errors can be detected, or even corrected. The traditional tools of coding theory have come from combinatorics and group theory. Lately, however, coding theorists have added techniques from algebraic geometry to their toolboxes. In particular, by re-interpreting the Reed-Solomon codes, one can see how to define new codes based on divisors on algebraic curves. For instance, using modular curves over finite fields, Tsfasman, Vladut, and Zink showed that one can define a sequence of codes with asymptotically better parameters than any previously known codes. This monograph is based on a series of lectures the author gave as part of the IAS/PCMI program on arithmetic algebraic geometry. Here, the reader is introduced to the exciting field of algebraic geometric coding theory. Presenting the material in the same conversational tone of the lectures, the author covers linear codes, inclu...

  15. Benchmarking the Multidimensional Stellar Implicit Code MUSIC

    Science.gov (United States)

    Goffrey, T.; Pratt, J.; Viallet, M.; Baraffe, I.; Popov, M. V.; Walder, R.; Folini, D.; Geroux, C.; Constantino, T.

    2017-04-01

    We present the results of a numerical benchmark study for the MUltidimensional Stellar Implicit Code (MUSIC) based on widely applicable two- and three-dimensional compressible hydrodynamics problems relevant to stellar interiors. MUSIC is an implicit large eddy simulation code that uses implicit time integration, implemented as a Jacobian-free Newton Krylov method. A physics based preconditioning technique which can be adjusted to target varying physics is used to improve the performance of the solver. The problems used for this benchmark study include the Rayleigh-Taylor and Kelvin-Helmholtz instabilities, and the decay of the Taylor-Green vortex. Additionally we show a test of hydrostatic equilibrium, in a stellar environment which is dominated by radiative effects. In this setting the flexibility of the preconditioning technique is demonstrated. This work aims to bridge the gap between the hydrodynamic test problems typically used during development of numerical methods and the complex flows of stellar interiors. A series of multidimensional tests were performed and analysed. Each of these test cases was analysed with a simple, scalar diagnostic, with the aim of enabling direct code comparisons. As the tests performed do not have analytic solutions, we verify MUSIC by comparing it to established codes including ATHENA and the PENCIL code. MUSIC is able to both reproduce behaviour from established and widely-used codes as well as results expected from theoretical predictions. This benchmarking study concludes a series of papers describing the development of the MUSIC code and provides confidence in future applications.

  16. Potential application of SERS for arsenic speciation in biological matrices.

    Science.gov (United States)

    Yang, Mingwei; Matulis, Shannon; Boise, Lawrence H; McGoron, Anthony J; Cai, Yong

    2017-08-01

    Speciation of arsenic is usually carried out using chromatography-based methods coupled with spectroscopic determination; however, the inevitable procedures involving sample preparation and separation could potentially alter the integrity of the arsenic metabolites present in biological samples. Surface-enhanced Raman spectroscopy (SERS) could be a promising alternative for providing a reliable arsenic analysis under the influence of a cellular matrix. A method for arsenic speciation using SERS in cellular matrix was developed in this study and four arsenicals were selected, including arsenite (As III ), arsenate (As V ), monomethylarsonic acid (MMA V ) and dimethylarsinic acid (DMA V ). Silver nanoparticles in the form of colliodal suspension with different surface charges, i.e., coated with citrate (AgNPs-Citrate) and spermine (AgNPs-Spermine) were employed as SERS substrates. Adsorption of arsenicals on nanoparticles in colloidal suspensions and the cellular matrix and the pH, size, and zeta potential of the colloidal suspensions were investigated for a better understanding of the SERS signal response of arsenicals in the colloidal suspensions or under the influence of cellular matrix. Arsenicals showed substantially different SERS responses in the two colloidal suspensions, mainly because of the distinct difference in the interaction between the arsenicals and the nanoparticles. Arsenic speciation in cell lysate could be successfully carried out in AgNPs-Spermine suspension, while AgNPs-Citrate could not yield significant SERS signals under the experimental conditions. This study proved that AgNPs-Spermine colloidal suspension could be a promising SERS substrate for studying arsenic metabolism in a biological matrix, reducing the bias caused by traditional techniques that involve sample extraction and pretreatment.

  17. Nickel speciation in cement-stabilized/solidified metal treatment filtercakes

    Energy Technology Data Exchange (ETDEWEB)

    Roy, Amitava, E-mail: reroy@lsu.edu [J. Bennett Johnston, Sr., Center for Advanced Microstructures and Devices, Louisiana State University, Baton Rouge, LA 70806, USA (United States); Stegemann, Julia A., E-mail: j.stegemann@ucl.ac.uk [Centre for Resource Efficiency & the Environment, Department of Civil, Environmental & Geomatic Engineering, University College London, Chadwick Building, Gower Street, London WC1E 6BT, UK (United Kingdom)

    2017-01-05

    Highlights: • XAS shows the same Ni speciation in untreated and stabilized/solidified filtercake. • Ni solubility is the same for untreated and stabilized/solidified filtercake. • Leaching is controlled by pH and physical encapsulation for all binders. - Abstract: Cement-based stabilization/solidification (S/S) is used to decrease environmental leaching of contaminants from industrial wastes. In this study, two industrial metal treatment filtercakes were characterized by X-ray diffractometry (XRD), thermogravimetric and differential thermogravimetric analysis (TG/DTG) and Fourier transform infrared (FTIR); speciation of nickel was examined by X-ray absorption (XAS) spectroscopy. Although the degree of carbonation and crystallinity of the two untreated filtercakes differed, α-nickel hydroxide was identified as the primary nickel-containing phase by XRD and nickel K edge XAS. XAS showed that the speciation of nickel in the filtercake was unaltered by treatment with any of five different S/S binder systems. Nickel leaching from the untreated filtercakes and all their stabilized/solidified products, as a function of pH in the acid neutralization capacity test, was essentially complete below pH ∼5, but was 3–4 orders of magnitude lower at pH 8–12. S/S does not respeciate nickel from metal treatment filtercakes and any reduction of nickel leaching by S/S is attributable to pH control and physical mechanisms only. pH-dependent leaching of Cr, Cu and Ni is similar for the wastes and s/s products, except that availability of Cr, Cu and Zn at decreased pH is reduced in matrices containing ground granulated blast furnace slag.

  18. Phylogenetic niche conservatism and the evolutionary basis of ecological speciation.

    Science.gov (United States)

    Pyron, R Alexander; Costa, Gabriel C; Patten, Michael A; Burbrink, Frank T

    2015-11-01

    Phylogenetic niche conservatism (PNC) typically refers to the tendency of closely related species to be more similar to each other in terms of niche than they are to more distant relatives. This has been implicated as a potential driving force in speciation and other species-richness patterns, such as latitudinal gradients. However, PNC has not been very well defined in most previous studies. Is it a pattern or a process? What are the underlying endogenous (e.g. genetic) and exogenous (e.g. ecological) factors that cause niches to be conserved? What degree of similarity is necessary to qualify as PNC? Is it possible for the evolutionary processes causing niches to be conserved to also result in niche divergence in different habitats? Here, we revisit these questions, codifying a theoretical and operational definition of PNC as a mechanistic evolutionary process resulting from several factors. We frame this both from a macroevolutionary and population-genetic perspective. We discuss how different axes of physical (e.g. geographic) and environmental (e.g. climatic) heterogeneity interact with the fundamental process of PNC to produce different outcomes of ecological speciation. We also review tests for PNC, and suggest ways that these could be improved or better utilized in future studies. Ultimately, PNC as a process has a well-defined mechanistic basis in organisms, and future studies investigating ecological speciation would be well served to consider this, and frame hypothesis testing in terms of the processes and expected patterns described herein. The process of PNC may lead to patterns where niches are conserved (more similar than expected), constrained (divergent within a limited subset of available niches), or divergent (less similar than expected), based on degree of phylogenetic relatedness between species. © 2014 Cambridge Philosophical Society.

  19. Miscibility and Speciation in the Water/carbon Dioxide System

    Science.gov (United States)

    Abramson, E.; Bollengier, O.; Brown, J. M.

    2017-12-01

    We have been exploring fluid-fluid solubilities and speciation in mixed systems of CO2-H2O. Fluid-fluid immiscibility extends to the highest pressures and temperatures yet explored (7 GPa, 700K). In this region, commonly used COH fluid models agree neither with the data nor among themselves. The range of immiscibility is extended by addition of NaCl, but miscibility limits determined in preliminary experiments are not as expected from extrapolation of lower pressure (linked to an observed change in speciation as CO2(aq) reacts with water. The identity of the newly formed species is, as of the writing of this abstract, unknown, but presumed to be either H2CO3 or HCO3-. A reasonable match between the observed equilibria and an application of HKF theory suggests that the new species is, indeed, HCO3-, but with a Raman frequency shifted from that found in the dilute aqueous solution. Application of HKF theory to the CO2(f)-CO2(aq) equilibrium suffers from an incompatibility of the usual formulation of the theory with known molar volumes of CO2(f) at higher pressures. On the basis of these studies we conclude that models of CO2-H2O fluids must take into account major changes in speciation, and that simple equations-of-state, of a few fitted parameters, will not afford an adequate description of such fluids. "First principles" models, tested against real data, seem more likely to yield the desired results. This statement extends as well to the calculation of the dielectric constants of these mixed fluids, the basis of ionic solution chemistry. Further, semi-empirical formulations of solution thermodynamics, which function well at pressures of kbars, ought to be re-worked for use over larger pressure ranges.

  20. Modelling interaction of deep groundwaters with bentonite and radionuclide speciation

    International Nuclear Information System (INIS)

    Wanner, H.

    1986-04-01

    In the safety analysis recently reported for a potential Swiss high-level waste repository, radionuclide speciation and solubility limits are calculated for expected granitic groundwater conditions. With the objective of deriving a more realistic description of radionuclide release from the near-field, an investigation has been initiated to quantitatively specify the chemistry of the near-field. In the Swiss case, the main components of the near-field are the glass waste-matrix, a thick steel canister horizontally emplaced in a drift, and a backfill of highly compacted sodium bentonite. This report describes a thermodynamic model which is used to estimate the chemical composition of the pore water in compacted sodium bentonite. Solubility limits and speciation of important actinides and the fission product technetium in the bentonite pore water are then calculated. The model is based on available experimental data on the interaction of sodium bentonite and groundwater and represents means of extrapolation from laboratory data to repository conditions. The modelled composition of the pore water of compacted sodium bentonite, as well as the various compositions resulting from the long-term extrapolation, are used to estimate radionuclide solubilities in the near-field of a deep repository. From the chemical point of view, calcium bentonite seems to be more stable than sodium bentonite in the presence of Swiss Reference Groundwater. Since the effect of calcium bentonite on the groundwater chemical composition will be considerably less marked than that of sodium bentonite, especially with respect to key parameters for the nuclide speciation like carbonate concentration and pH, the use of calcium bentonite instead of sodium bentonite will improve the reliability in the prediction of source terms for radionuclide transport in the geosphere. (author)