WorldWideScience

Sample records for novos taxa lepidoptera

  1. A molecular analysis of the Gelechiidae (Lepidoptera, Gelechioidea) with an interpretative grouping of its taxa

    DEFF Research Database (Denmark)

    Karsholt, Ole; Mutanen, Marko; Lee, Sangmi

    2013-01-01

    We re-examine the higher level phylogeny and evolutionary affinities of the family Gelechiidae (Lepidoptera: Gelechioidea) based on DNA sequence data for one mitochondrial gene (cytochrome c oxidase subunit I ) and seven nuclear genes (Elongation Factor-1α, wingless, Ribosomal protein S5, Isocitr......We re-examine the higher level phylogeny and evolutionary affinities of the family Gelechiidae (Lepidoptera: Gelechioidea) based on DNA sequence data for one mitochondrial gene (cytochrome c oxidase subunit I ) and seven nuclear genes (Elongation Factor-1α, wingless, Ribosomal protein S5......, Isocitrate dehydrogenase, Cytosolic malate dehydrogenase, Glyceraldehyde-3-phosphate dehydrogenase and Carbamoylphosphate synthase domain protein). Fifty-two taxa representing nearly all established subfamilies and tribes of Gelechiidae, and about 10% of described gelechiid genera, in addition to five......, Palumbina Rondani and Polyhymno Chambers. Gelechiidae display a wide array of life-history strategies, but the diversity in patterns of larval mode of life has direct phylogenetic correlation only below subfamily level, suggesting multiple origins and/or frequent reversals for traits such as external...

  2. Hesperioidea e Papilionoidea (Lepidoptera coligidos em expedição aos Rios Nhamundá e Abacaxis, Amazonas, Brasil: novos subsídios para o conhecimento da biodiversidade da Amazônia Brasileira

    Directory of Open Access Journals (Sweden)

    Mirna M. Casagrande

    2012-03-01

    Full Text Available Hesperioidea e Papilionoidea (Lepidoptera coligidos em expedição aos Rios Nhamundá e Abacaxis, Amazonas, Brasil: novos subsídios para o conhecimento da biodiversidade da Amazônia Brasileira. Objetivando um aprimoramento do conhecimento da lepidopterofauna diurna da Amazônia brasileira, este estudo lista 180 taxa coligidos em cinco pontos distintos de dois afluentes do Rio Amazonas, envolvendo as áreas de endemismo Guiana e Rondônia. As coletas foram passivas e ativas e as diferentes localidades comparadas através de análise de Escalonamento Multidimensional Não-Métrico (NMDS.

  3. A molecular analysis of the Gelechiidae (Lepidoptera, Gelechioidea) with an interpretative grouping of its taxa

    DEFF Research Database (Denmark)

    Karsholt, Ole; Mutanen, Marko; Lee, Sangmi;

    2013-01-01

    , Isocitrate dehydrogenase, Cytosolic malate dehydrogenase, Glyceraldehyde-3-phosphate dehydrogenase and Carbamoylphosphate synthase domain protein). Fifty-two taxa representing nearly all established subfamilies and tribes of Gelechiidae, and about 10% of described gelechiid genera, in addition to five...

  4. A Clarification of the Status of Four Taxa in the Ectoedemia Angulifasciella Group (Nepticulidae: Lepidoptera)

    NARCIS (Netherlands)

    Wilkinson, C.; Bryan, G.; Menken, S.B.J.; Nieukerken, van E.J.

    1983-01-01

    The status of the four taxa Ectoedemia angulifasciella, E. atricollis, E. rubivora and E. arcuatella, has always been in debate. They have now been studied using several different systematic methods, relating to morphology, gel electrophoresis, host plant differentiation, life histories and distribu

  5. Lepidoptera

    DEFF Research Database (Denmark)

    Aguiar, António M. Franquinho; Karsholt, Ole

    2009-01-01

      Being the first of a series dealing with the entomofauna of the Madeira and Selvagens Islands, this catalogue is a list of all Lepidoptera recorded from this region of Macaronesia, with references to the relevant literature. The checklist includes 37 families, 211 genera and 331 species. 31...... species are recorded from Madeira for the first time, and exact data and locality are given for these in the notes. 32 species, which had previously been recorded from Madeira, are removed from the list of Lepidoptera found in the Madeira Islands being misidentifications, doubtful and unconfirmed records......, undetermined species requiring further study and accidentally introduced species which have not established themselves in Madeira. No genus of Lepidoptera is endemic to Madeira, but 81 species are endemic to the Madeira Archipelago, and a further 36 species are considered Macaronesian endemics. One species...

  6. Lepidoptera

    DEFF Research Database (Denmark)

    Lopez-Vaamonde, Carlos; Agassiz, David; Augustin, Sylvie

    2012-01-01

    , Madeira and Azores) 21.6%, North America 16.5%, Australasia 7.2% and the neotropics just 5.2%. Th e route for almost all aliens to Europe is via importation of plants or plant products. Most alien Lepidoptera established in Europe are also confi ned to man-made habitats, with 52.5% occuring in parks...

  7. Lepidoptera

    DEFF Research Database (Denmark)

    Lopez-Vaamonde, Carlos; Agassiz, David; Augustin, Sylvie

    2012-01-01

    for hundreds of years, 74% have established during the 20th century and arrivals are accelerating, with an average of 1.9 alien Lepidoptera newly established per year between 2000–2007. For 78 aliens with a known area of origin, Asia has contributed 28.9%, Africa (including Macaronesian islands, Canaries...

  8. Lepidoptera

    DEFF Research Database (Denmark)

    Aguiar, António M. Franquinho; Karsholt, Ole

    2009-01-01

    , undetermined species requiring further study and accidentally introduced species which have not established themselves in Madeira. No genus of Lepidoptera is endemic to Madeira, but 81 species are endemic to the Madeira Archipelago, and a further 36 species are considered Macaronesian endemics. One species...

  9. Novos táxons em Onciderini (Coleoptera, Cerambycidae, Lamiinae New taxa in Onciderini (Coleoptera, Cerambycidae, Lamiinae

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    Ubirajara R. Martins

    2010-03-01

    Full Text Available Novos táxons descritos: Oncideres sparsemaculatus sp. nov., da Guatemala (San Marcos; Oncideres estebani sp. nov. da Costa Rica (Alajuela; Neohylus alexandrei sp. nov. e Hypsioma bahiensis, sp. nov. do Brasil (Rondônia e Bahia, respectivamente; Paraplerodia gen. nov., espécie-tipo, P. acarinata sp. nov., Hesycha biguttata sp. nov., Trestonia lateapicata sp. nov. e Pseudobeta transversa sp. nov. da Bolívia (Santa Cruz.New taxa described: Oncideres sparsemaculatus sp. nov., from Guatemala (San Marcos; Oncideres estebani sp. nov. from Costa Rica (Alajuela; Neohylus alexandrei sp. nov. and Hypsioma bahiensis, sp. nov. from Brazil (Rondônia and Bahia, respectively; Paraplerodia gen. nov., type species, P. acarinata sp. nov., Hesycha biguttata sp. nov., Trestonia lateapicata sp. nov. and Pseudobeta transversa sp. nov. from Bolívia (Santa Cruz.

  10. New Calisto species from Cuba, with insights on the relationships of Cuban and Bahamian taxa (Lepidoptera, Nymphalidae, Satyrinae).

    Science.gov (United States)

    Núnez Aguila, Rayner; Matos-Maraví, Pável F; Wahlberg, Niklas

    2013-01-01

    Three new species and a new subspecies of Calisto Hübner are described from Cuba, Calisto torrei sp. n. Núñez, Calisto dissimulatum sp. n. Núñez, Calisto aquilum sp. n. Núñez, and Calisto aquilum occidentalis ssp. n. Núñez. The immature stages of C. torrei and C. dissimulatum are also described. Notes on the distribution and biology of the species are given. All Cuban and Bahamian taxa form a monophyletic group which seems to have originated in northeastern Cuba spreading later to the west. DNA sequence data also allowed to recognize both Bahamian taxa, Calisto sibylla and Calisto apollinis stat. n., as distinct species, and to synonymize Calisto herophile parsonsi syn. n. under Calisto herophile.

  11. Novos táxons em Apomecynini (Coleoptera, Cerambycidae, Lamiinae da Região Neotropical New taxa in Apomecynini (Coleoptera, Cerambycidae, Lamiinae of the Neotropical Region

    Directory of Open Access Journals (Sweden)

    Maria Helena M. Galileo

    2004-03-01

    Full Text Available Novos táxons descritos em Apomecynini: Eyiaba gen. nov., com duas espécies novas, E. picta sp. nov. (Brasil: São Paulo e E. itapetinga sp. nov. (Brasil: Bahia; Adetus jacareacanga sp. nov. (Brasil: Pará e Parmenonta dominicana sp. nov. (República Dominicana. Chave para identificação das espécies de Eyiaba é fornecida.The following new taxa are described: Eyiaba gen. nov., with two new species from Brazil: E. picta sp. nov. (type species (São Paulo and E. itapetinga sp. nov. (Bahia; Adetus jacareacanga sp. nov. from Brazil (Pará and Parmenonta dominicana sp. nov. from Dominican Republic. A key to the species of Eyiaba is added.

  12. Novos táxons e novo registro em Hemilophini (Coleoptera: Cerambycidae: Lamiinae New taxa and new record of Hemilophini (Coleoptera: Cerambycidae: Lamiinae

    Directory of Open Access Journals (Sweden)

    Ubirajara R. Martins

    2008-09-01

    Full Text Available Novas espécies descritas e ilustradas: Adesmus nigrolineatus sp. nov. do México (Oaxaca. Da Costa Rica: A. moruna sp. nov. (Heredia; Corcovado bezarki sp. nov. (Guanacaste; Alampyris fuscus sp. nov. (Guanacaste, Cariua gen. nov. espécie-tipo C. sulphurea sp. nov., (Guanacaste. Da Bolívia: Phoebemima albomaculata sp. nov. (Cochabamba; Ipepo gen. nov. espécie-tipo I. dilatatus sp. nov. (Santa Cruz. Do Brasil: Adesmus facetus sp. nov. e Canarana arguta sp. nov. (Rondônia. É acrescentado novo registro na Costa Rica para Piruanycha pitilla Galileo & Martins, 2005. As três espécies novas de Adesmus distinguem-se: A. nigrolineatus sp. nov. pelas faixas longitudinais de tegumento preto nos élitros; A. moruna sp. nov. pelos élitros inteiramente pretos; A. facetus pelas faixas oblíquas de pubescência branca após o meio dos élitros além das manchas do quarto apical e das epipleuras. Phoebemima albomaculata sp. nov. caracteriza-se pela mancha basal de pubescência branca dos élitros estendendo-se sobre a sutura. Corcovado bezarki sp. nov. distingue-se pelo escapo preto e antenômeros esbranquiçados. Canarana arguta sp. nov. tem o protórax e os urosternitos I a IV cobertos por densa pubescência amarelada. Alampyris fusca sp. nov. difere de A. cretaria principalmente pelo antenômero III mais longo que o escapo. Cariua sulphurea sp. nov. separa-se pela presença de urosternitos revestidos por pubescência branca compacta e Ipepo dilatatus sp. nov. caracteriza-se pelos élitros tri-carenados.New species described and illustrated: Adesmus nigrolineatus sp. nov. from Mexico (Oaxaca. From Costa Rica: A. moruna sp. nov. (Heredia; Corcovado bezarki sp. nov. (Guanacaste; Alampyris fuscus sp. nov. (Guanacaste, Cariua gen. nov. type species C. sulphurea sp. nov. (Guanacaste. From Bolivia: Phoebemima albomaculata sp. nov. (Cochabamba; Ipepo gen. nov. type species I. dilatatus sp. nov. (Santa Cruz. From Brazil: Adesmus facetus sp. nov. and Canarana

  13. Novos táxons de Hemilophini (Coleoptera, Cerambycidae da Região Neotropical New taxa of Hemilophini (Coleoptera, Cerambycidae from the Neotropical Region

    Directory of Open Access Journals (Sweden)

    Maria Helena M. Galileo

    2005-09-01

    Full Text Available Novos táxons descritos da Costa Rica: Erana cretaria sp. nov., Itumbiara denudata sp. nov., Hilaroleopsis coloratus sp. nov., Alampyris flavicollis sp. nov., Cotycuara viridis sp. nov., Adesmus stellatus sp. nov., A. pilatus sp. nov. (também do Panamá; do Panamá: Eulachnesia amoena sp. nov., Cotycuara crinita sp. nov.; da Venezuela: Abanycha fasciata sp. nov.; do Equador: Mariliana hovorei sp. nov., Adesmus ocellatus sp. nov.; do Peru: Susuanycha gen. nov., espécie-tipo, S. susua sp. nov., Malacoscylus elegantulus sp. nov., Adesmus guttatus sp. nov., A. calca sp. nov.; do Brasil (Minas Gerais: Sybaguasu cornutum sp. nov. Acrescenta-se chave para as espécies de Cotycuara.New taxa described from Costa Rica: Erana cretaria sp. nov., Itumbiara denudata sp. nov., Hilaroleopsis coloratus sp. nov., Alampyris flavicollis sp. nov., Cotycuara viridis sp. nov., Adesmus stellatus sp. nov., A. pilatus sp. nov. (also from Panama; from Panama: Eulachnesia amoena sp. nov., Cotycuara crinita sp. nov.; from Venezuela: Abanycha fasciata sp. nov.; from Ecuador: Mariliana hovorei sp. nov., Adesmus ocellatus sp. nov.; from Peru: Susuanycha gen. nov., type species, S. susua sp. nov., Malacoscylus elegantulus sp. nov., Adesmus guttatus sp. nov., A. calca sp. nov.; from Brazil (Minas Gerais: Sybaguasu cornutum sp. nov. A key to the species of Cotycuara is added.

  14. Thracides phidon (Cramer (Lepidoptera: Hesperiidae: Hesperiinae: Novo registro em plantios comerciais de Heliconia spp. na região Amazônica do Brasil

    Directory of Open Access Journals (Sweden)

    Rafael Ribeiro

    2012-03-01

    Full Text Available Lepidoptera desfolhadores podem danificar cultivos de flores tropicais, mas existem poucos relatos desses insetos em plantas de Heliconia spp. O objetivo dessa pesquisa foi registrar uma nova ocorrência de Thracides phidon (Cramer (Lepidoptera: Hesperiidae, Hesperiinae como desfolhadora de Heliconia spp. em plantios comerciais na região Amazônica do Brasil.

  15. Thracides phidon (Cramer) (Lepidoptera: Hesperiidae: Hesperiinae): Novo registro em plantios comerciais de Heliconia spp. na região Amazônica do Brasil

    OpenAIRE

    Rafael Ribeiro; Isabela Carvalho; Gabriely Souza; Hany Fouad; Walkymário Lemos

    2012-01-01

    Lepidoptera desfolhadores podem danificar cultivos de flores tropicais, mas existem poucos relatos desses insetos em plantas de Heliconia spp. O objetivo dessa pesquisa foi registrar uma nova ocorrência de Thracides phidon (Cramer) (Lepidoptera: Hesperiidae, Hesperiinae) como desfolhadora de Heliconia spp. em plantios comerciais na região Amazônica do Brasil.

  16. Novos táxons em Hemilophini (Coleoptera, Cerambycidae com única carena elitral New taxa in Hemilophini (Coleoptera, Cerambycidae with a single elytral carina

    Directory of Open Access Journals (Sweden)

    Maria Helena M. Galileo

    Full Text Available New taxa described from Bolivia (Santa Cruz: Canarana roseicollis sp. nov., Gagarinia melasma sp. nov., Hemioloapis ybyra sp. nov.; from Ecuador (Napo: Adesmus paradiana sp. nov., Hemiloapis endyba sp. nov; from Costa Rica: Sybaguasu cupreum sp. nov.; from Costa Rica and Panama: Cotycuara gen. nov., type species, C. albomarginata sp. nov.; Iatuca gen. nov., type species, I. brevicornis sp. nov. A key to the species of Hemiloapis Galileo & Martins, 2004 is added.

  17. Description of the ova and ovipositional strategies of six sterrhine taxa from Madrid, including comparative data with other species of this subfamily (Lepidoptera: Geometridae: Sterrhinae

    Directory of Open Access Journals (Sweden)

    King, Gareth Edward

    2016-06-01

    Full Text Available Original data are presented which describe ova of the following six taxa in the Sterrhinae Meyrick, 1892: Idaea litigiosaria (Boisduval, 1840, Idaea sericeata calvaria Wehrli, 1927, Idaea ochrata albida (Zerny, 1936, Idaea incisaria (Staudinger, 1892, Idaea cervantaria (Millière, 1869 and >em>Scopula (Glossotrophia asellaria dentatolineata Wehrli, 1926. Subsequent analysis of SEM imaging provides data related to the chorion structure, as well as that associated with the strategies adopted by females at oviposition under laboratory conditions; comparative data are provided of other European sterrhines.Se presentan datos inéditos que describen los huevos de los siguientes taxones de Sterrhinae Meyrick, 1892: Idaea litigiosaria (Boisduval, 1840, Idaea sericeata calvaria Wehrli, 1927, Idaea ochrata albida (Zerny, 1936, Idaea incisaria (Staudinger, 1892, Idaea cervantaria (Millière, 1869 and Scopula (Glossotrophia asellaria dentatolineata Wehrli, 1926. Se ofrece un análisis pormenorizado de las imágenes MEB en cuanto a la estructura del corión se refiere, además de una descripción de las estrategias de la puesta adoptadas por parte de las hembras en condiciones de laboratorio. Se ofrecen datos comparativos con otras especies europeas de Sterrhinae.

  18. Incomplete Sex Chromosome Dosage Compensation in the Indian Meal Moth, Plodia interpunctella, Based on De Novo Transcriptome Assembly

    Science.gov (United States)

    Harrison, Peter W.; Mank, Judith E.; Wedell, Nina

    2012-01-01

    Males and females experience differences in gene dose for loci in the nonrecombining region of heteromorphic sex chromosomes. If not compensated, this leads to expression imbalances, with the homogametic sex on average exhibiting greater expression due to the doubled gene dose. Many organisms with heteromorphic sex chromosomes display global dosage compensation mechanisms, which equalize gene expression levels between the sexes. However, birds and Schistosoma have been previously shown to lack chromosome-wide dosage compensation mechanisms, and the status in other female heterogametic taxa including Lepidoptera remains unresolved. To further our understanding of dosage compensation in female heterogametic taxa and to resolve its status in the lepidopterans, we assessed the Indian meal moth, Plodia interpunctella. As P. interpunctella lacks a complete reference genome, we conducted de novo transcriptome assembly combined with orthologous genomic location prediction from the related silkworm genome, Bombyx mori, to compare Z-linked and autosomal gene expression levels for each sex. We demonstrate that P. interpunctella lacks complete Z chromosome dosage compensation, female Z-linked genes having just over half the expression level of males and autosomal genes. This finding suggests that the Lepidoptera and possibly all female heterogametic taxa lack global dosage compensation, although more species will need to be sampled to confirm this assertion. PMID:23034217

  19. Preliminary assessment of biogeographic affinities of selected insect taxa of the state of Sonora, Mexico

    Science.gov (United States)

    Robert W. Jones; Alejandro Obregon-Zuniga; Sandra Guzman-Rodriguez

    2013-01-01

    The biogeographic affinites of butterflies (Lepidoptera: Papilionoidea and Hesperidae), damsel and dragonflies (Odonata), and ants (Hymenoptera: Formicidae) reported from the State of Sonora, Mexico were analyzed using published species lists. The combined distribution of these taxa was proportionally greater (47.4%) for those species within the Mega-Mexico3...

  20. New taxa of southern African Sesiini (Lepidoptera: Sesiidae).

    Science.gov (United States)

    Bartsch, Daniel

    2015-05-11

    Two new genera of Sesiini from southern Africa, each comprising only a single species are described and figured: Microsesia nana, new gen., new sp. (holotype in TMPS) and Coccophila, new gen., with Coccophila pythes (Druce, 1899), new comb. (holotype in BMNH). Bionomical data for Coccophila pythes are given for the first time.

  1. Review of Lepidoptera with trophic relationships to Picea abies (L. in the conditions of Czechia

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    Modlinger Roman

    2016-12-01

    Full Text Available Trophic relationships of Lepidoptera (Insecta occurring in the territory of Czechia to the Norway spruce (Picea abies L. was evaluated on the basis of the excerption and critical evaluation of literature. Each species was classified into the following categories – spruce as the host plant, regular development on spruce, narrow trophic relationship, indirect relationship and episodical occurrence. The particular taxa were also characterized according to their distribution and the form of larval life was specified. The development on spruce was documented in 96 species of Lepidoptera, which represented less than 3% of taxa belonging to this group and being reported from Czechia. Of that, spruce was a common host plant for 67 species, 23 species were polyphagous and might develop on spruce, and 6 species belonged to soil species damaging spruce roots, mainly in forest nurseries. Among the species of Lepidoptera, which regularly develop on spruce in the Czech conditions, 55 species were classified. As narrow specialists with special trophic relationship to spruce, 33 taxa could be considered. There were 15 spruce species with forestry importance, which were able to outbreak their populations regularly or irregularly. Among spruce species it was possible to classify 16 taxa as rare. The provided information on Lepidoptera with trophic relationship to spruce is applicable also for other Central European areas. Besides the species with importance for forest pest management, also rare taxa, which can become endangered by climate change or by forest management, were indicated.

  2. RNA interference in Lepidoptera

    DEFF Research Database (Denmark)

    Terenius, Ole; Papanicolaou, Alexie; Garbutt, Jennie S.

    2011-01-01

    Gene silencing through RNA interference (RNAi) has revolutionized the study of gene function, particularly in non-model insects. However, in Lepidoptera (moths and butterflies) RNAi has many times proven to be difficult to achieve. Most of the negative results have been anecdotal and the positive...... is particularly successful in the family Saturniidae and in genes involved in immunity. On the contrary, gene expression in epidermal tissues seems to be most difficult to silence. In addition, gene silencing by feeding dsRNA requires high concentrations for success. Possible causes for the variability of success...... in RNAi experiments in Lepidoptera are discussed. The review also points to a need to further investigate the mechanism of RNAi in lepidopteran insects and its possible connection to the innate immune response. Our general understanding of RNAi in Lepidoptera will be further aided in the future as our...

  3. Anholts sommerfugle (Lepidoptera)

    DEFF Research Database (Denmark)

    Karsholt, Ole; Bygebjerg, Rune; Meedom, Peter

    2008-01-01

      The Lepidoptera fauna of the Danish island of Anholt is surveyed, and 1160 species are recorded. Anholt is situated in Kattegat 44 km from Denmark and 47 km from Sweden. The history and environment of the island are briefly discussed, with special focus on the flora, and earlier studies...... of the Lepidopterera fauna of Anholt are dealt with. The present study is in first hand based on material collected by the late Ebbe Schmidt Nielsen and the authors, partly in the 1970's and partly in more recent years. The material do not permit a general comparison between the status of the Lepidoptera fauna...

  4. Transcriptome sequencing, and rapid development and application of SNP markers for the legume pod borer Maruca vitrata (Lepidoptera: Crambidae)

    Science.gov (United States)

    The legume pod borer, Maruca vitrata (Lepidoptera: Crambidae), is an insect pest species that is destructive to crops grown by subsistence farmers in tropical regions of West Africa. We present the de novo assembly of 3729 contigs from 454- and Sanger-derived sequencing reads for midgut, salivary, ...

  5. Large-Scale Evolutionary Patterns of Host Plant Associations in the Lepidoptera

    DEFF Research Database (Denmark)

    Menken, S.B.J.; Boomsma, J.J.; van Nieukerken, E.J.

    2010-01-01

    We characterized evolutionary patterns of host plant use across about 2500 species of British Lepidoptera, using character optimization and independent phylogenetic contrasts among 95 operational taxa, and evaluated the extent to which caterpillars are monophagous, use woody host plants, and feed...... concealed. We also analyzed the use of different Angiosperm superorders and related these associations to other key variables. The Nepticulidae, Pterophoridae, and Gracillariidae allowed explicit comparisons between the British fauna and the Lepidoptera worldwide, which indicated that our broad...... categorizations for Britain are accurate predictors for the global fauna. The first (lower glossatan) radiation of the Lepidoptera started with monophagous, internal feeding on woody Eurosids I. Polyphagy on nonwoody Eurosids I evolved together with the ability to feed externally, but did initially not produce...

  6. A large-scale, higher-level, molecular phylogenetic study of the insect order Lepidoptera (moths and butterflies)

    Science.gov (United States)

    Higher-level relationships within the Lepidoptera, and particularly within the species-rich subclade Ditrysia, are generally not well understood, although recent studies have yielded progress. 483 taxa spanning 115 of 124 families were sampled for 19 protein-coding nuclear genes. Their aligned nucle...

  7. Analysis of evolution in the lower Lepidoptera (Proceedings of the First International Workshop on Lower Lepidoptera)

    OpenAIRE

    1991-01-01

    The evolutionary mechanism in Lepidoptera is discussed. As a result of the comparison of evolution between the Microptergidae and the typical Lepidoptera, two different kinds of evolution are recognized. ・・・

  8. Corridor use by diverse taxa.

    Energy Technology Data Exchange (ETDEWEB)

    Haddad, Nick, M.; Browne, David, R.; Cunningham, Alan; Danielson, Brent, J.; Levey, Douglas, J.; Sargent, Sarah; Spira, Tim

    2003-01-01

    Haddad, N.M., D.R. Browne, A. Cunningham, B.J. Danielson, D.J. Levey, S. Sargent, and T. Spira. 2003. Corridor use by diverse taxa. Ecology, 84(3):609-615. One of the most popular approaches for maintaining populations and conserving biodiversity in fragmented landscapes is to retain or create corridors that connect otherwise isolated habitat patches. Working in large-scale, experimental landscapes in which open-habitat patches and corridors were created by harvesting pine forest, we showed that corridors direct movements of different types of species, including butterflies, small mammals, and bird dispersed plants, causing higher movement between connected than between unconnected patches. Corridors directed the movement of all 10 species studied, with all corridor effect sizes >68%. However, this corridor effect was significant for five species, not significant for one species, and inconclusive for four species because of small sample sizes. Although we found no evidence that corridors increase emigration from a patch, our results show that movements of disparate taxa with broadly different life histories and functional roles are directed by corridors.

  9. Towards a mitogenomic phylogeny of Lepidoptera.

    Science.gov (United States)

    Timmermans, Martijn J T N; Lees, David C; Simonsen, Thomas J

    2014-10-01

    The backbone phylogeny of Lepidoptera remains unresolved, despite strenuous recent morphological and molecular efforts. Molecular studies have focused on nuclear protein coding genes, sometimes adding a single mitochondrial gene. Recent advances in sequencing technology have, however, made acquisition of entire mitochondrial genomes both practical and economically viable. Prior phylogenetic studies utilised just eight of 43 currently recognised lepidopteran superfamilies. Here, we add 23 full and six partial mitochondrial genomes (comprising 22 superfamilies of which 16 are newly represented) to those publically available for a total of 24 superfamilies and ask whether such a sample can resolve deeper lepidopteran phylogeny. Using recoded datasets we obtain topologies that are highly congruent with prior nuclear and/or morphological studies. Our study shows support for an expanded Obtectomera including Gelechioidea, Thyridoidea, plume moths (Alucitoidea and Pterophoroidea; possibly along with Epermenioidea), Papilionoidea, Pyraloidea, Mimallonoidea and Macroheterocera. Regarding other controversially positioned higher taxa, Doidae is supported within the new concept of Drepanoidea and Mimallonidae sister to (or part of) Macroheterocera, while among Nymphalidae butterflies, Danainae and not Libytheinae are sister to the remainder of the family. At the deepest level, we suggest that a tRNA rearrangement occurred at a node between Adeloidea and Ditrysia+Palaephatidae+Tischeriidae.

  10. Indicator taxa revisited: useful for conservation planning?

    DEFF Research Database (Denmark)

    Larsen, Frank Wugt; Bladt, Jesper; Rahbek, Carsten

    2009-01-01

    investigate to what extent variation in species number between indicator taxa (e.g. 488 mammal spp. vs. 210 snake spp.) is causing the differences in effectiveness between indicator taxa. Second, we investigate whether indicator taxa are capable of outperforming indicator groups composed of random sets...... sets: sub-Saharan Africa (4,039 spp.), Denmark (847 spp.) and Uganda (2,822 spp.). Results:  We overall found that indicator taxa comprising a greater number of species tend to perform better than indicator taxa with fewer species (e.g. 488 mammal spp. outperform 210 snake spp.), although...

  11. Overview: Identification characters of Lepidoptera eggs (Insecta)

    Science.gov (United States)

    There are 160,000 species of described Lepidoptera, or moths and butterflies, on Earth. The egg stage is the least known biological stage of moths and butterflies and there have been very few comparative studies. The purpose of this video is to provide the few, major characteristics of Lepidoptera...

  12. New taxa, including three new genera show uniqueness of Neotropical Nepticulidae (Lepidoptera

    Directory of Open Access Journals (Sweden)

    Erik van Nieukerken

    2016-10-01

    Full Text Available After finding distinct clades in a molecular phylogeny for Nepticulidae that could not be placed in any known genera and discovering clear apomorphic characters that define these clades, as well as a number of Neotropical species that could be placed in known genera but were undescribed, three new genera and nine new species are here described from the Neotropics: Stigmella gallicola van Nieukerken & Nishida, sp. n. reared from galls on Hampea appendiculata (Malvaceae in Costa Rica, representing the first example of a gall making Stigmella; S. schinivora van Nieukerken, sp. n. reared from leafmines on Schinus terebinthifolia (Anacardiaceae in Argentina, Misiones; S. costaricensis van Nieukerken & Nishida, sp. n. and S. intronia van Nieukerken & Nishida, sp. n. each from a single specimen collected the same night in Costa Rica, Parque Nacional Chirripó; S. molinensis van Nieukerken & Snyers, sp. n. reared from leafmines on Salix humboldtiana, Peru, Lima, the first Neotropical species of the Stigmella salicis group sensu stricto; Ozadelpha van Nieukerken, gen. n. with type species O. conostegiae van Nieukerken & Nishida, sp. n., reared from leafmines on Conostegia oerstediana (Melastomataceae from Costa Rica; Neotrifurcula van Nieukerken, gen. n. with type species N. gielisorum van Nieukerken, sp. n. from Chile; Hesperolyra van Nieukerken, gen. n.. with type species Fomoria diskusi Puplesis & Robinson, 2000; Hesperolyra saopaulensis van Nieukerken, sp. n., reared from an unidentified Myrtaceae, Sao Paulo, Brasil; and Acalyptris janzeni van Nieukerken & Nishida, sp. n. from Costa Rica, Guanacaste. Five new combinations are made: Ozadelpha ovata (Puplesis & Robinson, 2000, comb. n. and Ozadelpha guajavae (Puplesis & Diškus, 2002, comb. n., Hesperolyra diskusi (Puplesis & Robinson, 2000, comb. n., Hesperolyra molybditis (Zeller, 1877, comb. n. and Hesperolyra repanda (Puplesis & Diškus, 2002, comb. n. Three specimens are briefly described, but left unnamed: Ozadelpha specimen EvN4680, Neotrifurcula specimen EvN4504 and Neotrifurcula specimen RH2.

  13. Antibiosis among selected paspalum taxa to the fall armyworm (Lepidoptera: Noctuidae)

    Science.gov (United States)

    Twenty six accessions of the warm-season perennial grass, Paspalum spp., were evaluated for response to the fall armyworm Spodoptera frugiperda (J. E. Smith), an important pest of turfgrass. In growth chamber, excised clipping studies, P. vaginatum 03-539-31 and P. vaginatum 03-525-22 were the most ...

  14. A molecular analysis of the Gelechiidae (Lepidoptera, Gelechioidea) with an interpretative grouping of its taxa

    DEFF Research Database (Denmark)

    Karsholt, Ole; Mutanen, Marko; Lee, Sangmi

    2013-01-01

    is the sister group of Chelariini; Pexicopiinae is the sister group of Apatetrinae, here suggested to be treated as a tribe Pexicopiini of Apatetrinae. A new subfamily Thiotrichinae (subfam.n.) is proposed on the basis of the resurrected genus Thiotricha Meyrick (gen.rev.), which includes Macrenches Meyrick...

  15. Systematic position of two Athamanthia Zhdanko, 1983 (Lepidoptera, Lycaenidae) taxa from the Iranian Plateau.

    Science.gov (United States)

    Krupitsky, Anatoly V; Pljushtch, Igor G; Skrylnik, Yuriy Ye

    2017-02-20

    In the present paper we refine the systematic position of an unclear lycaenine taxon povolnyi Howarth & Povolny, 1976 previously known only from the holotype male. Based on the appearance and morphology of the male genitalia we recognize it as a subspecies of Athamanthia balucha (Howarth & Povolny 1976)-A. b. povolnyi (Howarth & Povolny, 1976), comb. nov. Morphology of the subspecies is redescribed, female is described and illustrated for the first time, and distribution data are added taking into consideration recent findings in Bamyan province of Afghanistan. Taxon athamantides Eckweiler & ten Hagen, 2001 from Central and Southeast Iran is also treated as a subspecies of A. balucha-A. b. athamantides (Eckweiler & ten Hagen, 2001), comb. nov.-based on the similarity of the male genitalia and the wing pattern with A. balucha.

  16. New taxa, including three new genera show uniqueness of Neotropical Nepticulidae (Lepidoptera)

    Science.gov (United States)

    van Nieukerken, Erik J.; Doorenweerd, Camiel; Nishida, Kenji; Snyers, Chris

    2016-01-01

    Abstract After finding distinct clades in a molecular phylogeny for Nepticulidae that could not be placed in any known genera and discovering clear apomorphic characters that define these clades, as well as a number of Neotropical species that could be placed in known genera but were undescribed, three new genera and nine new species are here described from the Neotropics: Stigmella gallicola van Nieukerken & Nishida, sp. n. reared from galls on Hampea appendiculata (Malvaceae) in Costa Rica, representing the first example of a gall making Stigmella; Stigmella schinivora van Nieukerken, sp. n. reared from leafmines on Schinus terebinthifolia (Anacardiaceae) in Argentina, Misiones; Stigmella costaricensis van Nieukerken & Nishida, sp. n. and Stigmella intronia van Nieukerken & Nishida, sp. n. each from a single specimen collected the same night in Costa Rica, Parque Nacional Chirripó; Stigmella molinensis van Nieukerken & Snyers, sp. n. reared from leafmines on Salix humboldtiana, Peru, Lima, the first Neotropical species of the Stigmella salicis group sensu stricto; Ozadelpha van Nieukerken, gen. n. with type species Ozadelpha conostegiae van Nieukerken & Nishida, sp. n., reared from leafmines on Conostegia oerstediana (Melastomataceae) from Costa Rica; Neotrifurcula van Nieukerken, gen. n. with type species Neotrifurcula gielisorum van Nieukerken, sp. n. from Chile; Hesperolyra van Nieukerken, gen. n.. with type species Fomoria diskusi Puplesis & Robinson, 2000; Hesperolyra saopaulensis van Nieukerken, sp. n., reared from an unidentified Myrtaceae, Sao Paulo, Brasil; and Acalyptris janzeni van Nieukerken & Nishida, sp. n. from Costa Rica, Guanacaste. Five new combinations are made: Ozadelpha ovata (Puplesis & Robinson, 2000), comb. n. and Ozadelpha guajavae (Puplesis & Diškus, 2002), comb. n., Hesperolyra diskusi (Puplesis & Robinson, 2000), comb. n., Hesperolyra molybditis (Zeller, 1877), comb. n. and Hesperolyra repanda (Puplesis & Diškus, 2002), comb. n. Three specimens are briefly described, but left unnamed: Ozadelpha specimen EvN4680, Neotrifurcula specimen EvN4504 and Neotrifurcula specimen RH2. PMID:27917037

  17. Discovery of a third species of Lamproptera Gray, 1832 (Lepidoptera: Papilionidae).

    Science.gov (United States)

    Hu, Shao-Ji; Zhang, Xin; Cotton, Adam M; Ye, Hui

    2014-04-11

    A newly discovered, third species of the genus Lamproptera (Lepidoptera: Papilionidae) is described, 183 years after the second currently recognised species was first named. Lamproptera paracurius Hu, Zhang & Cotton sp. n., from N.E. Yunnan, China, is based on marked differences in external morphology and male genital structure. The species is confirmed as a member of the genus, and detailed comparisons are made with other taxa included in the genus. Keys to Lamproptera species based on external characters and male genitalia are included.

  18. Ecological niches of open ocean phytoplankton taxa

    DEFF Research Database (Denmark)

    Brun, Philipp Georg; Vogt, Meike; Payne, Mark;

    2015-01-01

    We characterize the realized ecological niches of 133 phytoplankton taxa in the open ocean based on observations from the MAREDAT initiative and a statistical species distribution model (MaxEnt). The models find that the physical conditions (mixed layer depth, temperature, light) govern large...... conditions in the open ocean. Our estimates of the realized niches roughly match the predictions of Reynolds' C-S-R model for the global ocean, namely that taxa classified as nutrient stress tolerant have niches at lower nutrient and higher irradiance conditions than light stress tolerant taxa. Yet...

  19. New taxa and combinations in Rutaceae

    NARCIS (Netherlands)

    Kaastra, R.C.

    1977-01-01

    New taxa and combinations are published here in anticipation of the revision of the Rutaceae-Pilocarpinae to be published in the near future (thesis, and in Flora Neotropica). Two new combinations of species excluded from subtribe Pilocarpinae are added.

  20. In vitro propagation of endangered Dianthus taxa

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    Marković Marija

    2015-01-01

    Full Text Available The review of recent researches regarding the in vitro culture of 30 endangered Dianthus taxa is presented in this paper. Various in vitro protocols developed for selected rare and threatened Dianthus taxa are analysed in order to provide a useful synthesis of the data obtained with the main principles, techniques and recommendations for futher research and practice. The recapitulated data presented in this review can be used as a tool for the micropropagation of other endangered Dianthus taxa, enabling their propagation and obtaining a sufficient amount of plants for reintroduction. In addition, the obtained results represent the basis for ex situ conservation of the investigated taxa, especially for medium-term and long-term conservation (cryopreservation. [Projekat Ministarstva nauke Republike Srbije, br. 43007

  1. Tortricidae (Lepidoptera from Ethiopia

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    Józef Razowski

    2010-07-01

    Full Text Available Twenty six new species of Tortricidae from southeast Ethiopia are reported: Russograptis albulata sp. n., Acleris baleina sp. n., Acleris harenna sp. n., Procrica dinshona sp. n., Procrica parisii sp. n., Choristoneura palladinoi sp. n., Lozotaenia karchana sp. n., Lozotaenia sciarrettae sp. n., Endothenia ethiopica sp. n., Crotalaria albapex sp. n., Eccopsis brunneopostica sp. n., Eccopsis subincana sp. n., Megalota lygaria sp. n., Bubonoxena alatheta sp. n., Plutographa xanthala sp. n., Epinotia anepenthes sp. n., Epinotia latiloba sp. n., Coccothera triorbis sp. n., Coccothera carolae sp. n., Multiquestia aequivoca sp. n., Coniostola separata sp. n., Cydia tytthaspis sp. n., Cydia dinshoi sp. n., Cydia lathetica sp. n., Grapholita insperata sp. n., Thaumatotibia spinai sp. n. Some faunistic data on the known taxa from this country are included. The material examined is too scarce to draw any zoogeographic conclusion but there are some species common to Ethiopia and the Republic of South Africa, Mozambique and Uganda or are very closely related with them. Two Acleris Hübner, 1825 described in this paper are closely allied with the Afghan species.

  2. Novos táxons em Heteropsini (Coleoptera, Cerambycidae New taxa of Heteropsini (Coleoptera, Cerambycidae

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    Dilma Solange Napp

    2009-01-01

    Full Text Available Potisangaba gen. nov., espécie-tipo P. panama sp. nov., são descritos do Panamá (Colon e três novas espécies são descritas em Chrysoprasis: C. principalis sp. nov. de Trinidad y Tobago (Trinidad, C. grupiara sp. nov. do Brasil (Rondônia e C. morana sp. nov. da Bolívia (Santa Cruz.Potisangaba gen. nov., type species, P. panama sp. nov., are described from Panama (Colon and three new species are described in Chrysoprasis: C. principalis sp. nov. from Trinidad y Tobago (Trinidad, C. grupiara from Brazil (Rondônia and C. morana sp. nov. from Bolivia (Santa Cruz.

  3. Phylogeny and Evolution of Lepidoptera.

    Science.gov (United States)

    Mitter, Charles; Davis, Donald R; Cummings, Michael P

    2017-01-31

    Until recently, deep-level phylogeny in Lepidoptera, the largest single radiation of plant-feeding insects, was very poorly understood. Over the past two decades, building on a preceding era of morphological cladistic studies, molecular data have yielded robust initial estimates of relationships both within and among the ∼43 superfamilies, with unsolved problems now yielding to much larger data sets from high-throughput sequencing. Here we summarize progress on lepidopteran phylogeny since 1975, emphasizing the superfamily level, and discuss some resulting advances in our understanding of lepidopteran evolution.

  4. Color, iridescence, and thermoregulation in Lepidoptera.

    Science.gov (United States)

    Bosi, Stephen G; Hayes, Jacqueline; Large, Maryanne C J; Poladian, Leon

    2008-10-10

    This paper examines evidence for the hypothesized connection between solar thermal properties of butterfly and moth (Lepidoptera) wings, iridescence/structural color, and thermoregulation. Specimens of 64 species of Lepidoptera were measured spectrophotometrically, their solar absorptances calculated, and their habitat temperatures determined. No correlation was found between habitat temperature and the solar absorptance of the wings. It was found, however, that the iridescent specimens exhibited, on average, substantially higher solar absorptance than noniridescent ones.

  5. Allochthonous woody taxa in Zasavica ecosystem

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    Čavlović, D.

    2011-09-01

    Full Text Available Special Nature Reserve Zasavica is an important wetland in Serbia. Therefore, it was designated as “Special Nature Reserve of the First Category“ in 1997. Moreover, it has been included in the national network of Ramsar sites (the Ramsar Convention on Wetlands of International Importance, in 2006. Considering importance of Special Nature Reserve Zasavica and the fact that stability of ecosystems can be disturbed by introducing alien species, we analyzed extent and coverage of allochthonous woody taxa within the Reserve region. Researching area comprised 1821 hectares. We found 21 allochthonous woody taxa that belong to Magnoliophyta subdivision. The most individuals are located within the first zone of protection.

  6. De Novo Glutamine Synthesis

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    Qiao He MD

    2016-04-01

    Full Text Available Purpose: The aim of this study was to investigate the role of de novo glutamine (Gln synthesis in the proliferation of C6 glioma cells and its detection with 13N-ammonia. Methods: Chronic Gln-deprived C6 glioma (0.06C6 cells were established. The proliferation rates of C6 and 0.06C6 cells were measured under the conditions of Gln deprivation along with or without the addition of ammonia or glutamine synthetase (GS inhibitor. 13N-ammonia uptake was assessed in C6 cells by gamma counting and in rats with C6 and 0.06C6 xenografts by micro–positron emission tomography (PET scanning. The expression of GS in C6 cells and xenografts was assessed by Western blotting and immunohistochemistry, respectively. Results: The Gln-deprived C6 cells showed decreased proliferation ability but had a significant increase in GS expression. Furthermore, we found that low concentration of ammonia was sufficient to maintain the proliferation of Gln-deprived C6 cells, and 13N-ammonia uptake in C6 cells showed Gln-dependent decrease, whereas inhibition of GS markedly reduced the proliferation of C6 cells as well as the uptake of 13N-ammoina. Additionally, microPET/computed tomography exhibited that subcutaneous 0.06C6 xenografts had higher 13N-ammonia uptake and GS expression in contrast to C6 xenografts. Conclusion: De novo Gln synthesis through ammonia–glutamate reaction plays an important role in the proliferation of C6 cells. 13N-ammonia can be a potential metabolic PET tracer for Gln-dependent tumors.

  7. The Ando-Patagonian Stigmella magnispinella group (Lepidoptera, Nepticulidae) with description of new species from Ecuador, Peru and Argentina.

    Science.gov (United States)

    Stonis, Jonas R; Remeikis, Andrius; Diškus, Arūnas; Gerulaitis, Virginijus

    2016-12-01

    On the basis of morphological studies of collection samples from the Andes (Ecuador, Peru and Argentina), we describe five new species of Stigmella Schrank (Lepidoptera: Nepticulidae): S. varispinella Diškus & Stonis, sp. nov. (Ecuador), S. olekarsholti Remeikis Diškus & Stonis, sp. nov., S. magnispinella Remeikis & Stonis, sp. nov. (Peru), S. dolia Remeikis & Stonis, sp. nov., and S. patagonica Remeikis & Stonis, sp. nov. (Argentina). All treated taxa belong to the newly designated S. magnispinella group. Images of adults and genitalia, pictorial keys, a distribution map, and photographs of the leaf-mines of S. olekarsholti are included.

  8. Comprehensive molecular sampling yields a robust phylogeny for geometrid moths (Lepidoptera: Geometridae.

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    Pasi Sihvonen

    Full Text Available BACKGROUND: The moth family Geometridae (inchworms or loopers, with approximately 23,000 described species, is the second most diverse family of the Lepidoptera. Apart from a few recent attempts based on morphology and molecular studies, the phylogeny of these moths has remained largely uninvestigated. METHODOLOGY/PRINCIPAL FINDINGS: We performed a rigorous and extensive molecular analysis of eight genes to examine the geometrid affinities in a global context, including a search for its potential sister-taxa. Our maximum likelihood analyses included 164 taxa distributed worldwide, of which 150 belong to the Geometridae. The selected taxa represent all previously recognized subfamilies and nearly 90% of recognized tribes, and originate from all over world. We found the Geometridae to be monophyletic with the Sematuridae+Epicopeiidae clade potentially being its sister-taxon. We found all previously recognized subfamilies to be monophyletic, with a few taxa misplaced, except the Oenochrominae+Desmobathrinae complex that is a polyphyletic assemblage of taxa and the Orthostixinae, which was positioned within the Ennominae. The Sterrhinae and Larentiinae were found to be sister to the remaining taxa, followed by Archiearinae, the polyphyletic assemblage of Oenochrominae+Desmobathrinae moths, Geometrinae and Ennominae. CONCLUSIONS/SIGNIFICANCE: Our study provides the first comprehensive phylogeny of the Geometridae in a global context. Our results generally agree with the other, more restricted studies, suggesting that the general phylogenetic patterns of the Geometridae are now well-established. Generally the subfamilies, many tribes, and assemblages of tribes were well supported but their interrelationships were often weakly supported by our data. The Eumeleini were particularly difficult to place in the current system, and several tribes were found to be para- or polyphyletic.

  9. Fossil butterflies, calibration points and the molecular clock (Lepidoptera: Papilionoidea).

    Science.gov (United States)

    Jong, Rienk DE

    2017-05-25

    Fossil butterflies are extremely rare. Yet, they are the only direct evidence of the first appearance of particular characters and as such, they are crucial for calibrating a molecular clock, from which divergence ages are estimated. In turn, these estimates, in combination with paleogeographic information, are most important in paleobiogeographic considerations. The key issue here is the correct allocation of fossils on the phylogenetic tree from which the molecular clock is calibrated.The allocation of a fossil on a tree should be based on an apomorphic character found in a tree based on extant species, similar to the allocation of a new extant species. In practice, the latter is not done, at least not explicitly, on the basis of apomorphy, but rather on overall similarity or on a phylogenetic analysis, which is not possible for most butterfly fossils since they usually are very fragmentary. Characters most often preserved are in the venation of the wings. Therefore, special attention is given to possible apomorphies in venational characters in extant butterflies. For estimation of divergence times, not only the correct allocation of the fossil on the tree is important, but also the tree itself influences the outcome as well as the correct determination of the age of the fossil. These three aspects are discussed.        All known butterfly fossils, consisting of 49 taxa, are critically reviewed and their relationship to extant taxa is discussed as an aid for correctly calibrating a molecular clock for papilionoid Lepidoptera. In this context some aspects of age estimation and biogeographic conclusions are briefly mentioned in review. Specific information has been summarized in four appendices.

  10. Evolution of sexual dimorphism in the Lepidoptera

    NARCIS (Netherlands)

    Allen, C.E.; Zwaan, B.J.; Brakefield, P.M.

    2011-01-01

    Among the animals, the Lepidoptera (moths and butterflies) are second only to beetles in number of described species and are known for their striking intra- and interspecific diversity. Within species, sexual dimorphism is a source of variation in life history (e.g., sexual size dimorphism and prota

  11. Evolution of sexual dimorphism in the Lepidoptera

    NARCIS (Netherlands)

    Allen, C.E.; Zwaan, B.J.; Brakefield, P.M.

    2011-01-01

    Among the animals, the Lepidoptera (moths and butterflies) are second only to beetles in number of described species and are known for their striking intra- and interspecific diversity. Within species, sexual dimorphism is a source of variation in life history (e.g., sexual size dimorphism and

  12. Notas e descrições em Acanthoderini (Coleoptera, Cerambycidae, Lamiinae. I. Novos táxons, nova sinonímia e novos registros

    Directory of Open Access Journals (Sweden)

    Ubirajara R. Martins

    2007-01-01

    Full Text Available Notas e descrições em Acanthoderini (Coleoptera, Cerambycidae, Lamiinae. I. Novos táxons e novos registros. Descrição de espécies novas: Zikanita egregia sp. nov. (Bolívia, Santa Cruz; Dufauxia thomasi sp. nov. (Bolívia, Santa Cruz; Irundisaua punctata sp. nov. (Colômbia, Cauca; Cotyzineus gen. nov., espécie-tipo C. bruchi (Melzer, 1931 comb. nov. Novos registros: Zikanita argenteofasciata (Tippmann, 1960 é assinalada para o Brasil (Maranhão e Cotyzineus bruchi para a Bolívia (Santa Cruz. Novo sinônimo: Ateralphus diringsi Martins & Monné, 1993 = A. javariensis Lane, 1965.Notes and descriptions on Acanthoderini (Coleoptera, Cerambycidae, Lamiinae. I. New taxa and new records. New taxa described: Zikanita egregia, sp. nov. from Bolivia (Santa Cruz; Dufauxia thomasi sp. nov. from Bolivia (Santa Cruz; Irundisaua punctata sp. nov. from Colombia (Cauca; Cotyzineus gen. nov. type species C. bruchi (Melzer, 1931 comb. nov. New records: Zikanita argenteofasciata (Tippmann, 1960 for Brazil (Maranhão; Cotyzineus bruchi for Bolivia (Santa Cruz. New synomym: Ateralphus diringsi Martins & Monné, 1993 = A. javariensis Lane, 1965.

  13. Food searching behaviour of a Lepidoptera pest species is modulated by the foraging gene polymorphism.

    Science.gov (United States)

    Chardonnet, Floriane; Capdevielle-Dulac, Claire; Chouquet, Bastien; Joly, Nicolas; Harry, Myriam; Le Ru, Bruno; Silvain, Jean-François; Kaiser, Laure

    2014-10-01

    The extent of damage to crop plants from pest insects depends on the foraging behaviour of the insect's feeding stage. Little is known, however, about the genetic and molecular bases of foraging behaviour in phytophagous pest insects. The foraging gene (for), a candidate gene encoding a PKG-I, has an evolutionarily conserved function in feeding strategies. Until now, for had never been studied in Lepidoptera, which includes major pest species. The cereal stem borer Sesamia nonagrioides is therefore a relevant species within this order with which to study conservation of and polymorphism in the for gene, and its role in foraging - a behavioural trait that is directly associated with plant injuries. Full sequencing of for cDNA in S. nonagrioides revealed a high degree of conservation with other insect taxa. Activation of PKG by a cGMP analogue increased larval foraging activity, measured by how frequently larvae moved between food patches in an actimeter. We found one non-synonymous allelic variation in a natural population that defined two allelic variants. These variants presented significantly different levels of foraging activity, and the behaviour was positively correlated to gene expression levels. Our results show that for gene function is conserved in this species of Lepidoptera, and describe an original case of a single nucleotide polymorphism associated with foraging behaviour variation in a pest insect. By illustrating how variation in this single gene can predict phenotype, this work opens new perspectives into the evolutionary context of insect adaptation to plants, as well as pest management.

  14. Predictors of elevational biodiversity gradients change from single taxa to the multi-taxa community level

    DEFF Research Database (Denmark)

    Peters, Marcell K; Hemp, Andreas; Appelhans, Tim;

    2016-01-01

    The factors determining gradients of biodiversity are a fundamental yet unresolved topic in ecology. While diversity gradients have been analysed for numerous single taxa, progress towards general explanatory models has been hampered by limitations in the phylogenetic coverage of past studies. By...

  15. Predictors of elevational biodiversity gradients change from single taxa to the multi-taxa community level

    DEFF Research Database (Denmark)

    Peters, Marcell K.; Hemp, Andreas; Appelhans, Tim

    2016-01-01

    The factors determining gradients of biodiversity are a fundamental yet unresolved topic in ecology. While diversity gradients have been analysed for numerous single taxa, progress towards general explanatory models has been hampered by limitations in the phylogenetic coverage of past studies...

  16. Chemical defense balanced by sequestration and de novo biosynthesis in a lepidopteran specialist.

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    Joel Fürstenberg-Hägg

    Full Text Available The evolution of sequestration (uptake and accumulation relative to de novo biosynthesis of chemical defense compounds is poorly understood, as is the interplay between these two strategies. The Burnet moth Zygaena filipendulae (Lepidoptera and its food-plant Lotus corniculatus (Fabaceae poses an exemplary case study of these questions, as Z. filipendulae belongs to the only insect family known to both de novo biosynthesize and sequester the same defense compounds directly from its food-plant. Z. filipendulae and L. corniculatus both contain the two cyanogenic glucosides linamarin and lotaustralin, which are defense compounds that can be hydrolyzed to liberate toxic hydrogen cyanide. The overall amounts and ratios of linamarin and lotaustralin in Z. filipendulae are tightly regulated, and only to a low extent reflect the ratio in the ingested food-plant. We demonstrate that Z. filipendulae adjusts the de novo biosynthesis of CNglcs by regulation at both the transcriptional and protein level depending on food plant composition. Ultimately this ensures that the larva saves energy and nitrogen while maintaining an effective defense system to fend off predators. By using in situ PCR and immunolocalization, the biosynthetic pathway was resolved to the larval fat body and integument, which infers rapid replenishment of defense compounds following an encounter with a predator. Our study supports the hypothesis that de novo biosynthesis of CNglcs in Z. filipendulae preceded the ability to sequester, and facilitated a food-plant switch to cyanogenic plants, after which sequestration could evolve. Preservation of de novo biosynthesis allows fine-tuning of the amount and composition of CNglcs in Z. filipendulae.

  17. Managing the forest for more than the trees: effects of experimental timber harvest on forest Lepidoptera.

    Science.gov (United States)

    Summerville, Keith S

    2011-04-01

    Studies of the effects of timber harvest on forest insect communities have rarely considered how disturbance from a range of harvest levels interacts with temporal variation in species diversity to affect community resistance to change. Here I report the results of a landscape-scale, before-and-after, treatment-control experiment designed to test how communities of forest Lepidoptera experience (1) changes in species richness and composition and (2) shifts in species dominance one year after logging. I sampled Lepidoptera from 20 forest stands allocated to three harvest treatments (control, even-aged shelterwood or clearcuts, and uneven-aged group selection cuts) within three watersheds at Morgan-Monroe State Forest, Indiana, USA. Moths were sampled from all forest stands one year prior to harvest in 2007 and immediately post-harvest in 2009. Species composition was most significantly affected by temporal variation between years, although uneven-aged management also caused significant changes in lepidopteran community structure. Furthermore, species richness of Lepidoptera was higher in 2007 compared to 2009 across all watersheds and forest stands. The decrease in species richness between years, however, was much larger in even-aged and uneven-aged management units compared to the control. Furthermore, matrix stands within the even-aged management unit demonstrated the highest resistance to species loss within any management unit. Species dominance was highly resistant to effects of timber harvest, with pre- and post-harvest values for Simpson diversity nearly invariant. Counter to prediction, however, the suite of dominant taxa differed dramatically among the three management units post-harvest. My results suggest that temporal variation may have strong interactions with timber harvest, precipitating loss of nearly 50% species richness from managed stands regardless of harvest level. Even-aged management, however, appeared to leave the smallest "footprint" on moth

  18. Novo desenvolvimentismo e liberalismo enraizado

    OpenAIRE

    Gonçalves,Reinaldo

    2012-01-01

    O objetivo geral deste artigo é discutir a evolução da formulação político‑ideológica de desenvolvimento econômico conhecida como novo desenvolvimentismo. O objetivo específico é demonstrar a hipótese de que o novo desenvolvimentismo é mais uma versão do liberalismo enraizado, que exprime o compromisso entre as diretrizes estratégicas do liberalismo e a intervenção estatal orientada para a estabilização macroeconômica.

  19. Pesquisa de novos elementos Pesquisa de novos elementos

    Directory of Open Access Journals (Sweden)

    Gil Mário de Macedo Grassi

    1978-11-01

    Full Text Available The present study deals with the discovery of new elements synthesized by man. The introduction discusses in general the theories about nuclear transmutation, which is the method employed in these syntheses. The study shows the importance of the Periodical Table since it is through this table that one can reach a prevision of new elements and its, properties. The discoveries of the transuranic elements, together wich the data of their first preparations are also tabulated The stability of these elements is also discussed, and future speculations are showedNeste trabalho estuda-se, teoricamente, a descoberta de novos elementos sintetizados pelo homem Na introdução apresentamos um apanhado geral sobre as teorias a respeito da transmutação nuclear, que é o método utilizado nestas sínteses. Em seguida, mostramos a importância da Tabela Periódica, pois é através dela que se chega à previsão dos novos elementos e de suas propriedades. As descobertas dos transurânicos, Já realizadas com êxito, juntamente com os dados de suas primeiras preparações são tabelados. A estabilidade destes novos elementos também é discutida, e apresentadas futuras especulações.

  20. A taxa de câmbio no centro da teoria do desenvolvimento

    Directory of Open Access Journals (Sweden)

    Luiz Carlos Bresser-Pereira

    2012-08-01

    Full Text Available Este artigo apresenta as principais ideias da macroeconomia estruturalista do desenvolvimento - a teoria por trás de novo-desenvolvimentismo. Seu foco é a taxa de câmbio que é pela primeira vez colocada no centro da economia do desenvolvimento. A teoria econômica geralmente vê a taxa de câmbio como um problema de curto prazo a ser discutido na macroeconomia. A macroeconomia estruturalista do desenvolvimento mostra que há, nos países em desenvolvimento, a tendência à sobreapreciação cíclica da taxa de câmbio causada pela falta de neutralização da doença holandesa e por entradas de capital excessivas. Em consequência, considera a taxa de câmbio cronicamente sobreapreciada e, por isso, um grande obstáculo ao crescimento econômico. No processo de desenvolvimento, a taxa de câmbio tem a função de um interruptor de luz que conecta ou desconecta as empresas nacionais que utilizam a tecnologia no estado da arte mundial dos mercados mundiais.This paper presents the main ideas of structuralist development macroeconomics - the theory behind new developmentalism. Its focus is on the exchange rate that is positioned for the first time in the core of development economics. Economic theory usually views the exchange rate as a short term problem to be discussed in open macroeconomics. Structuralist development macroeconomics argues that there is in developing countries a tendency to the cyclical overvaluation of the exchange rate caused by the lack of neutralization of the Dutch disease and by excessive capital inflows. In consequence it views the exchange rate as chronically overvalued, and, for that reason, a major obstacle to economic growth. In the development process, the exchange rate has the role of light switch that connects or disconnects the national business enterprises utilizing technology in the world state of the art from world markets.

  1. Achene slime content in some taxa of Matricaria L. (Asteraceae)

    OpenAIRE

    Inceer, Huseyin

    2011-01-01

    The achenes of Matricaria aurea and two varieties of M. chamomilla (var. chamomilla and var. recutita) have slime cells on the surface and they are characterized by slime envelope formation during hydration. The slime in these taxa is composed of pectins and cellulose. The slime could play important role in the distribution and colonisation of new habitats in Matricaria taxa.

  2. 76 FR 20558 - Endangered and Threatened Wildlife and Plants; 44 Marine and Anadromous Taxa: Adding 10 Taxa...

    Science.gov (United States)

    2011-04-13

    ... from Texas to Gulf of Mexico) Florida and along and the Southwest the east coast Atlantic. from Florida... Fish and Wildlife Service 50 CFR Part 17 RIN 1018-AW09 Endangered and Threatened Wildlife and Plants; 44 Marine and Anadromous Taxa: Adding 10 Taxa, Delisting 1 Taxon, Reclassifying 1 Taxon, and...

  3. Sex pheromone of the baldcypress leafroller (Lepidoptera: Tortricidae)

    Science.gov (United States)

    Brian T. Sullivan; Jeremy D. Allison; Richard A. Goyer; William P. Shepherd

    2015-01-01

    The baldcypress leafroller, Archips goyerana Kruse (Lepidoptera: Tortricidae), is a specialist on Taxodium distichum (L.) Richard and has caused serious defoliation in swamps of southeastern Louisiana, accelerating decline of baldcypress forests concurrently suffering from nutrient depletion, prolonged flooding, and saltwater...

  4. Antibiosis in Ascia monuste orseis Godart (Lepidoptera: Pieridae ...

    African Journals Online (AJOL)

    Flávio Gonçalves

    In general, throughout the larval stage, A. monuste orseis caterpillars that fed on the .... DC) na biologia Plutella xylostella (L., 1758) (Lepidoptera: Plutellidae). Cienc. ... Plant resistance to arthropods: molecular and conventional approaches.

  5. Saniba nom. nov. para Sabina Evans (Lepidoptera, Hesperiidae, Hesperiinae

    Directory of Open Access Journals (Sweden)

    Mielke Olaf H. H.

    2003-01-01

    Full Text Available Saniba nom. nov. for Sabina Evans, 1955 (Lepidoptera, Hesperiidae, Hesperiinae. Sabina Evans, 1955 is preoccupied by Williams (1851 (Annelida, Polychaeta; a new replacement name is proposed: Saniba Mielke & Casagrande.

  6. Quantifying the responses of biological indices to rare macroinvertebrate taxa exclusion: Does excluding more rare taxa cause more error?

    Science.gov (United States)

    Yu, Zhengda; Wang, Hui; Meng, Jiao; Miao, Mingsheng; Kong, Qiang; Wang, Renqing; Liu, Jian

    2017-03-01

    Including or excluding rare taxa in bioassessment is a controversial topic, which essentially affects the reliability and accuracy of the result. In the present paper, we hypothesize that biological indices such as Shannon-Wiener index, Simpson's index, Margalef index, evenness, BMWP (biological monitoring working party), and ASPT (Average Score Per Taxon) respond differently to rare taxa exclusion. To test this hypothesis, a benthic macroinvertebrate data set based on recent fifteen-year studies in China was built for suppositional plot analyses. A field research was conducted in the Nansi Lake to perform related analyses. The results of suppositional plot simulations showed that Simpson's index placed more weight on common taxa than any other studied indices, followed by Shannon-Wiener index which remained a high value with the exclusion of rare taxa. The results indicated that there was not much of effect on Simpson's index and Shannon-Wiener index when rare taxa were excluded. Rare taxa played an important role in Margalef index and BMWP than in other indices. Evenness showed an increase trend, while ASPT varied inconsistently with the exclusion of rare taxa. Results of the field study also indicated that rare taxa had few impacts on the Shannon-Wiener index. By examining the relationships between the rare taxa and biological indices in our study, it is suggested that including the rare taxa when using BMWP and excluding them in the proposed way (e.g., fixed-count subsampling) to calculate Shannon-Wiener index and Simpson's index could raise the efficiency and reduce the biases in the bioassessment of freshwater ecosystems.

  7. Testing DNA barcode performance in 1000 species of European lepidoptera: large geographic distances have small genetic impacts.

    Science.gov (United States)

    Huemer, Peter; Mutanen, Marko; Sefc, Kristina M; Hebert, Paul D N

    2014-01-01

    This study examines the performance of DNA barcodes (mt cytochrome c oxidase 1 gene) in the identification of 1004 species of Lepidoptera shared by two localities (Finland, Austria) that are 1600 km apart. Maximum intraspecific distances for the pooled data were less than 2% for 880 species (87.6%), while deeper divergence was detected in 124 species. Despite such variation, the overall DNA barcode library possessed diagnostic COI sequences for 98.8% of the taxa. Because a reference library based on Finnish specimens was highly effective in identifying specimens from Austria, we conclude that barcode libraries based on regional sampling can often be effective for a much larger area. Moreover, dispersal ability (poor, good) and distribution patterns (disjunct, fragmented, continuous, migratory) had little impact on levels of intraspecific geographic divergence. Furthermore, the present study revealed that, despite the intensity of past taxonomic work on European Lepidoptera, nearly 20% of the species shared by Austria and Finland require further work to clarify their status. Particularly discordant BIN (Barcode Index Number) cases should be checked to ascertain possible explanatory factors such as incorrect taxonomy, hybridization, introgression, and Wolbachia infections.

  8. [Altitudinal richness patterns of Papilionidae, Pieridae and Nymphalidae (Lepidoptera) in Mexican mountain areas].

    Science.gov (United States)

    Monteagudo Sabaté, David; Luis Martínez, Moisés Armando

    2013-09-01

    Altitudinal richness patterns of Papilionidae, Pieridae and Nymphalidae (Lepidoptera) in Mexican mountain areas. Butterflies constitute an useful group to investigate biodiversity patterns in specific geographic areas. The aim of this study was to describe the altitudinal patterns distribution and to recognize the main grouping factors of these families. We conducted a comparative study between the butterfly fauna (Papilionidae, Pieridae and Nymphalidae) of five Mexican mountain ranges (Sierra de Manantlán, Sierra de Atoyac de Alvarez, Loxicha Region, Teocelo-Xalapa and Sierra de Juárez), that included 34 sites of altitudinal ranges from 100 to 2 820m. Data was obtained from the Zoology Museum of the National University of Mexico, and comprised more than 60 000 butterfly records of 398 taxa (subspecies level) proceeding during the last 35 years. Fauna similarity between localities were analyzed using a cluster analysis by Sorensen similarity coefficient. Species richness showed a general tendency to decrease with altitude; the main difference was found between the locality with higher altitude and the rest of the sites. The principal factors affecting the identified clusters followed this order: the location in Pacific or Atlantic slope, and location on a particular mountain range. Three altitudinal levels (low elevations, up to 1 200m; intermediate elevations, from 1200 to 1800 m; and high elevations, from 1800 to 2500 m) were described in accordance to their main characteristic taxa. While Neartic elements were common in the highest altitudinal floor, Neotropical taxa were common in the lowest one. It was more difficult to characterize the intermediate level in which a high number of localities were clustered; this intermediate level was characterized by the presence of some endemic species. The results suggest that historical factors are preeminent in butterfly fauna composition in these areas. Future studies may include other Mexican mountain areas to obtain

  9. De novo trisomy 16p

    Energy Technology Data Exchange (ETDEWEB)

    Juan, J.L.C.; Cigudosa, J.C.; Gomez, A.O. [Univ. of La Laguna, Tenerife, Canary Islands (Spain)] [and others

    1997-01-20

    We report on a patient with psychomotor retardation and a pattern of malformations comprising single umbilical artery, craniofacial anomalies, severe truncal hypotonia, and lower-limb hyporreflexia. G-banding cytogenetics demonstrated a 16p+ chromosome. Parental chromosomes were normal. The use of fluorescent in situ hybridization (FISH) showed that this extra material derived from chromosome 16. High-resolution G-banding demonstrated a duplicated segment on the 16p arm, confirming our suspicion of a de novo tandem duplication; hence, the cytogenetic diagnosis was given as 46,XY,dir dup(16)(p11.2{r_arrow}p12). 9 refs., 3 figs.

  10. De novo peptide sequencing by deep learning.

    Science.gov (United States)

    Tran, Ngoc Hieu; Zhang, Xianglilan; Xin, Lei; Shan, Baozhen; Li, Ming

    2017-07-18

    De novo peptide sequencing from tandem MS data is the key technology in proteomics for the characterization of proteins, especially for new sequences, such as mAbs. In this study, we propose a deep neural network model, DeepNovo, for de novo peptide sequencing. DeepNovo architecture combines recent advances in convolutional neural networks and recurrent neural networks to learn features of tandem mass spectra, fragment ions, and sequence patterns of peptides. The networks are further integrated with local dynamic programming to solve the complex optimization task of de novo sequencing. We evaluated the method on a wide variety of species and found that DeepNovo considerably outperformed state of the art methods, achieving 7.7-22.9% higher accuracy at the amino acid level and 38.1-64.0% higher accuracy at the peptide level. We further used DeepNovo to automatically reconstruct the complete sequences of antibody light and heavy chains of mouse, achieving 97.5-100% coverage and 97.2-99.5% accuracy, without assisting databases. Moreover, DeepNovo is retrainable to adapt to any sources of data and provides a complete end-to-end training and prediction solution to the de novo sequencing problem. Not only does our study extend the deep learning revolution to a new field, but it also shows an innovative approach in solving optimization problems by using deep learning and dynamic programming.

  11. A molecular view of autophagy in Lepidoptera.

    Science.gov (United States)

    Romanelli, Davide; Casati, Barbara; Franzetti, Eleonora; Tettamanti, Gianluca

    2014-01-01

    Metamorphosis represents a critical phase in the development of holometabolous insects, during which the larval body is completely reorganized: in fact, most of the larval organs undergo remodeling or completely degenerate before the final structure of the adult insect is rebuilt. In the past, increasing evidence emerged concerning the intervention of autophagy and apoptosis in the cell death processes that occur in larval organs of Lepidoptera during metamorphosis, but a molecular characterization of these pathways was undertaken only in recent years. In addition to developmentally programmed autophagy, there is growing interest in starvation-induced autophagy. Therefore we are now entering a new era of research on autophagy that foreshadows clarification of the role and regulatory mechanisms underlying this self-digesting process in Lepidoptera. Given that some of the most important lepidopteran species of high economic importance, such as the silkworm, Bombyx mori, belong to this insect order, we expect that this information on autophagy will be fully exploited not only in basic research but also for practical applications.

  12. Record of Borearctia menetriesii (Eversmann, 1846 (Lepidoptera, Erebidae, Arctiinae larva on Aconitum rubicundum Fischer (Ranunculaceae in Eastern Siberia

    Directory of Open Access Journals (Sweden)

    Oleg E. Berlov

    2015-01-01

    Full Text Available In this note we report the first record of Borearctia menetriesii (Eversmann, 1846 (Erebidae: Arctiinae larva on a native host plant, Aconitum rubicundum Fischer (Ranunculaceae. This aconite species is a close relative of A. lycoctonum, which is widespread across Eurasia, but has a scattered distribution in Fennoscandia. The majority of B. menetriesii localities are situated within the distribution range of A. lycoctonum and other aconite taxa, which are diverse and widespread in the Eastern Palaearctic. However, only two of the six westernmost B. menetriesii localities in Finland are in accordance with sporadic records of A. lycoctonum. Our record confirms that B. menetriesii is a polyphagous species like most other boreal Arctiinae. We have expanded the list of a few Lepidoptera species which can use Aconitum spp. as suitable host plants despite the fact that they are poisonous for insects because of high alkaloid content.

  13. Zulma Ageitos de Castellanos: Publications and status of described taxa.

    Science.gov (United States)

    Signorelli, Javier H; Urteaga, Diego; Teso, Valeria

    2015-10-28

    Zulma Ageitos de Castellanos was an Argentinian malacologist working in the "Facultad de Ciencias Naturales y Museo" at La Plata University where she taught invertebrate zoology between 1947 and 1990. Her scientific publications are listed in chronological order. Described genus-group and species-group taxa are listed. Information about the type locality and type material, and taxonomic remarks are also provided. Finally, type material of all described taxa was requested and, when located, illustrated.

  14. MRUniNovo: an efficient tool for de novo peptide sequencing utilizing the hadoop distributed computing framework.

    Science.gov (United States)

    Li, Chuang; Chen, Tao; He, Qiang; Zhu, Yunping; Li, Kenli

    2016-12-19

    Tandem mass spectrometry-based de novo peptide sequencing is a complex and time-consuming process. The current algorithms for de novo peptide sequencing cannot rapidly and thoroughly process large mass spectrometry datasets. In this paper, we propose MRUniNovo, a novel tool for parallel de novo peptide sequencing. MRUniNovo parallelizes UniNovo based on the Hadoop compute platform. Our experimental results demonstrate that MRUniNovo significantly reduces the computation time of de novo peptide sequencing without sacrificing the correctness and accuracy of the results, and thus can process very large datasets that UniNovo cannot.

  15. De novo glomerular diseases after renal transplantation.

    Science.gov (United States)

    Ponticelli, Claudio; Moroni, Gabriella; Glassock, Richard J

    2014-08-07

    Glomerular diseases developing in the kidney allograft are more often recurrences of the original disease affecting the native kidneys. However, in an undefined number of cases de novo, glomerular diseases unrelated to the original disease in the native kidneys can develop in the transplanted kidney. The clinical presentation and histologic features of de novo diseases are often similar to those features observed in patients with primary or secondary GN in the native kidneys. However, in transplanted kidneys, the glomerular, vascular, and tubulointerstitial changes are often intertwined with structural abnormalities already present at the time of transplant or caused by antibody- or cell-mediated allograft rejection, immunosuppressive drugs, or superimposed infection (most often of a viral nature). The pathophysiology of de novo glomerular diseases is quite variable. In rare cases of de novo minimal change disease, circulating factors increasing the glomerular permeability likely participate. Maladaptive hemodynamic changes and tissue fibrosis caused by calcineurin inhibitors or other factors may be involved in the pathogenesis of de novo FSGS. The exposure of cryptic podocyte antigens may favor the development of de novo membranous nephropathy. Many cases of de novo membranoproliferative GN are related to hepatitis C virus infection. Patients with Alport syndrome lacking antigenic epitopes in their glomerular basement membrane may develop antibodies against these glomerular basement membrane antigens expressed in the transplanted kidney. Infection may cause acute GN to have a heterogeneous clinical presentation and outcome. De novo pauci-immune GN in renal transplant is rare. Preexisting or acquired intolerance to glucose may, in the long term, cause diabetic nephropathy. The prognosis of de novo diseases depends on the type of GN, the severity of lesions caused by the alloimmune response, or the efficacy of immunosuppressive therapy. In most cases, the management

  16. A Public Trial De Novo

    DEFF Research Database (Denmark)

    Vedel, Jane Bjørn; Gad, Christopher

    2011-01-01

    This article addresses the concept of “industrial interests” and examines its role in a topical controversy about a large research grant from a private foundation, the Novo Nordisk Foundation, to the University of Copenhagen. The authors suggest that the debate took the form of a “public trial......” where the grant and close(r) intermingling between industry and public research was prosecuted and defended. First, the authors address how the grant was framed in the media. Second, they redescribe the case by introducing new “evidence” that, because of this framing, did not reach “the court.......” The article ends with a discussion of some implications of the analysis, including that policy making, academic research, and public debates might benefit from more detailed accounts of interests and stakes....

  17. Proteomics of Soil and Sediment: Protein Identification by De Novo Sequencing of Mass Spectra Complements Traditional Database Searching

    Science.gov (United States)

    Miller, S.; Rizzo, A. I.; Waldbauer, J.

    2015-12-01

    Proteomics has the potential to elucidate the metabolic pathways and taxa responsible for in situ biogeochemical transformations. However, low rates of protein identification from high resolution mass spectra have been a barrier to the development of proteomics in complex environmental samples. Much of the difficulty lies in the computational challenge of linking mass spectra to their corresponding proteins. Traditional database search methods for matching peptide sequences to mass spectra are often inadequate due to the complexity of environmental proteomes and the large database search space, as we demonstrate with soil and sediment proteomes generated via a range of extraction methods. One alternative to traditional database searching is de novo sequencing, which identifies peptide sequences without the need for a database. BLAST can then be used to match de novo sequences to similar genetic sequences. Assigning confidence to putative identifications has been one hurdle for the implementation of de novo sequencing. We found that accurate de novo sequences can be screened by quality score and length. Screening criteria are verified by comparing the results of de novo sequencing and traditional database searching for well-characterized proteomes from simple biological systems. The BLAST hits of screened sequences are interrogated for taxonomic and functional information. We applied de novo sequencing to organic topsoil and marine sediment proteomes. Peak-rich proteomes, which can result from various extraction techniques, yield thousands of high-confidence protein identifications, an improvement over previous proteomic studies of soil and sediment. User-friendly software tools for de novo metaproteomics analysis have been developed. This "De Novo Analysis" Pipeline is also a faster method of data analysis than constructing a tailored sequence database for traditional database searching.

  18. Hearing in hooktip moths (Drepanidae: Lepidoptera)

    DEFF Research Database (Denmark)

    Surlykke, Annemarie; Yack, Jayne E; Spence, Andrew J

    2003-01-01

    This study presents anatomical and physiological evidence for a sense of hearing in hooktip moths (Drepanoidea). Two example species, Drepana arcuata and Watsonalla uncinula, were examined. The abdominal ears of drepanids are structurally unique compared to those of other Lepidoptera and other...... to the dorsal chamber. The ear is tuned to ultrasonic frequencies between 30 and 65 kHz, with a best threshold of around 52 dB SPL at 40 kHz, and no apparent difference between genders. Thus, drepanid hearing resembles that of other moths, indicating that the main function is bat detection. Two sensory cells...... are excited by sound stimuli. Those two cells differ in threshold by approximately 19 dB. The morphology of the ear suggests that the two larger scolopidia function as auditory sensilla; the two smaller scolopidia, located near the tympanal frame, were not excited by sound. We present a biophysical model...

  19. The chemistry of antipredator defense by secondary compounds in neotropical lepidoptera: facts, perspectives and caveats

    Directory of Open Access Journals (Sweden)

    Trigo José R.

    2000-01-01

    Full Text Available Chemical defense against predation in butterflies and moths has been studied since nineteenth century. A classical example is that of the larvae of the monarch butterfly Danaus plexippus, which feed on leaves of Asclepias curassavica (Asclepiadaceae, sequestering cardenolides. The adults are protected against predation by birds. Several other substances may be involved in chemical defense, such as iridoid glycosides, cyanogenic glycosides, glucosinolates, pyrrolizidine and tropane alkaloids, aristolochic acids, glycosidase inhibitors and pyrazines. The acquisition of these substances by lepidopterans can be due to sequestration from larval or adult host plants or de novo biosynthesis. Many Lepidoptera are known to be unpalatable, including the butterflies Troidini (Papilionidae, Pierinae (Pieridae, Eurytelinae, Melitaeinae, Danainae, Ithomiinae, Heliconiinae and Acraeinae (Nymphalidae, and Arctiidae moths, but knowledge of the chemical substances responsible for property is often scarce. This review discusses mainly three topics: field and laboratory observations on rejection of butterflies and moths by predators, correlation between unpalatability and chemicals found in these insects, and bioassays that test the activity of these chemicals against predators. Perspectives and future directions are suggested for this subject.

  20. Physiological correlates of chill susceptibility in Lepidoptera.

    Science.gov (United States)

    Andersen, Mads Kuhlmann; Jensen, Signe Overgaard; Overgaard, Johannes

    2017-04-01

    The majority of insects enter a state of reversible coma if temperature is lowered sufficiently. If the cold treatment is not too severe these insects recover gradually when returned to benign temperatures in a time-dependent manner that often depends on the duration and intensity of the cold exposure. Previous studies have associated these phenotypes to changes in membrane potential (Vm) and ion balance, and especially hemolymph [K(+)] is known to be of importance for the recovery time. In the present study we examined this link in three species of Lepidoptera as insects from this order are known to possess resting hemolymph [K(+)] that would severely compromise Vm in other insects. Specifically, we exposed larval and adult Manduca sexta, larval Bombyx mori, and adult Heliconius cydno to stressful cold (0°C) for extended periods of time. Subsequently we measured chill coma recovery time (CCRT), ion- and water balance, and muscle Vm. As expected we find that resting hemolymph [K(+)] is high and that resting hemolymph [Na(+)] is low compared to most other insect species. Muscle Vm depolarised considerably during acute cold exposure, but did so in a manner that was not associated with changes in ion balance. However, prolonged cold exposure coincided with an increase of hemolymph [K(+)] and further depolarisation of Vm which correlated well with prolongation of CCRT. Combined this demonstrates how insects with different ionic compositions generally suffer from similar consequences of cold stress as other species, such that cold tolerance of chill-susceptible insects within Lepidoptera is also intimately linked to maintenance of ion balance and membrane polarisation. Copyright © 2017 Elsevier Ltd. All rights reserved.

  1. Differences in root uptake of radiocaesium by 30 plant taxa

    Energy Technology Data Exchange (ETDEWEB)

    Broadley, M.R.; Willey, N.J. [University of the West of England, Bristol (United Kingdom). Faculty of Applied Sciences

    1997-12-31

    The concentration of Cs was measured in the shoots of 30 taxa of plants after exposing the roots for 6 h to 0.1 {mu}g radiolabelled Cs g{sup -1} soil. There were maximum differences between Chenopodium quinoa and Koeleria macrantha of 20-fold in Cs concentration and 100-fold in total Cs accumulated. There was a weak relationship between Rb(K) and Cs concentration across the 30 taxa, but a strong relationship within the Gramineae and Chenopodiaceae. Taxa in the Chenopodiaceae discriminated approximately nine times less between Rb and Cs during uptake than did those in the Gramineae. The lowest Cs concentrations occurred in slow growing Gramineae and the highest in fast growing Chenopodiaceae. If radiocaesium uptake by the Chenopodiaceae during chronic exposures shows similar patterns to those reported here after acute exposure, then the food contamination implications and the potential for phytoremediation of radiocaesium contaminated soils using plants in this family may be worth investigating. (author).

  2. History of introduction of Fagaceae taxa in Saint-Petersburg

    Directory of Open Access Journals (Sweden)

    Firsov Gennady

    2014-01-01

    Full Text Available During the period of introduction since the end of the XVIII сentury 80 taxa of Fagaceae have been tested in Saint-Petersburg: 5 – from genus Castanea, 9 – of Fagus and 66 – of Quercus. The modern collection numbers 24 taxa. The winter hardiness, especially the frost damaging after the abnormally cold winters, is considered to be the most serious limiting factor. The involving into cultivation of this group of important trees is connected first of all with names of such great arboriculturists and dendrologists as F. Fischer, E. Regel, C. Maximowicz, R. Schroeder, E. Wolf, N. Andronov, B. Zamyatnin and N. Bulygin.

  3. Mammal taxa constituting potential coevolved reservoirs of filoviruses

    DEFF Research Database (Denmark)

    Peterson, A.Townsend; Papes, Monica; Carroll, Darin S.

    2007-01-01

    The virus family Filoviridae includes 2 genera, the Marburg viruses and the Ebola viruses. The ecology of the filoviruses is poorly known, and indeed their host relationships remain completely unknown. An earlier effort prioritized mammalian taxa as to their possible status as the long-term coevo......The virus family Filoviridae includes 2 genera, the Marburg viruses and the Ebola viruses. The ecology of the filoviruses is poorly known, and indeed their host relationships remain completely unknown. An earlier effort prioritized mammalian taxa as to their possible status as the long...

  4. Eliciting the Functional Taxonomy from protein annotations and taxa.

    Science.gov (United States)

    Falda, Marco; Lavezzo, Enrico; Fontana, Paolo; Bianco, Luca; Berselli, Michele; Formentin, Elide; Toppo, Stefano

    2016-08-18

    The advances of omics technologies have triggered the production of an enormous volume of data coming from thousands of species. Meanwhile, joint international efforts like the Gene Ontology (GO) consortium have worked to provide functional information for a vast amount of proteins. With these data available, we have developed FunTaxIS, a tool that is the first attempt to infer functional taxonomy (i.e. how functions are distributed over taxa) combining functional and taxonomic information. FunTaxIS is able to define a taxon specific functional space by exploiting annotation frequencies in order to establish if a function can or cannot be used to annotate a certain species. The tool generates constraints between GO terms and taxa and then propagates these relations over the taxonomic tree and the GO graph. Since these constraints nearly cover the whole taxonomy, it is possible to obtain the mapping of a function over the taxonomy. FunTaxIS can be used to make functional comparative analyses among taxa, to detect improper associations between taxa and functions, and to discover how functional knowledge is either distributed or missing. A benchmark test set based on six different model species has been devised to get useful insights on the generated taxonomic rules.

  5. Morphological study of some Euphorbia taxa in Iran

    Directory of Open Access Journals (Sweden)

    SEYED MEHDI TALEBI

    2016-01-01

    Full Text Available Abstract. Talebi SM, Noori M, Davijani SS. 2016. Morphological study of some Euphorbia taxa in Iran. Nusantara Bioscience 8: 103-110. Euphorbia (Euphorbiaceae has nearly 2000 species and great morphological diversity present between its members. For this reason, species of this genus are classified into different infrageneric ranks. In the present study, morphological characteristics of fifteen taxa of this genus were examined in Iran. Thirty one qualitative and quantitative morphological characteristics from the vegetative and reproductive organs of the studied taxa were examined. ANOVA test showed significant variations for all of studied quantitative features. PCA-biplot of the studied traits confirmed that some of them were very useful for identification of the treated taxa. In addition, the obtained results did not confirm species classifications in sections/subsections according to Flora Iranica as well as Flora of Turkey and proved high morphological variations between these species; therefore traditional classification of species in subsection must be changed and our results confirmed previous molecular studies.

  6. Mammal taxa constituting potential coevolved reservoirs of filoviruses

    DEFF Research Database (Denmark)

    Peterson, A.Townsend; Papes, Monica; Carroll, Darin S.

    2007-01-01

    The virus family Filoviridae includes 2 genera, the Marburg viruses and the Ebola viruses. The ecology of the filoviruses is poorly known, and indeed their host relationships remain completely unknown. An earlier effort prioritized mammalian taxa as to their possible status as the long-term coevo...

  7. The hominin fossil record: taxa, grades and clades.

    Science.gov (United States)

    Wood, Bernard; Lonergan, Nicholas

    2008-04-01

    This paper begins by reviewing the fossil evidence for human evolution. It presents summaries of each of the taxa recognized in a relatively speciose hominin taxonomy. These taxa are grouped in grades, namely possible and probable hominins, archaic hominins, megadont archaic hominins, transitional hominins, pre-modern Homo and anatomically modern Homo. The second part of this contribution considers some of the controversies that surround hominin taxonomy and systematics. The first is the vexed question of how you tell an early hominin from an early panin, or from taxa belonging to an extinct clade closely related to the Pan-Homo clade. Secondly, we consider how many species should be recognized within the hominin fossil record, and review the philosophies and methods used to identify taxa within the hominin fossil record. Thirdly, we examine how relationships within the hominin clade are investigated, including descriptions of the methods used to break down an integrated structure into tractable analytical units, and then how cladograms are generated and compared. We then review the internal structure of the hominin clade, including the problem of how many subclades should be recognized within the hominin clade, and we examine the reliability of hominin cladistic hypotheses. The last part of the paper reviews the concepts of a genus, including the criteria that should be used for recognizing genera within the hominin clade.

  8. A multiplex real-time polymerase chain reaction assay to diagnose Epiphyas postvittana (Lepidoptera: Tortricidae).

    Science.gov (United States)

    Barr, N B; Ledezma, L A; Farris, R E; Epstein, M E; Gilligan, T M

    2011-10-01

    A molecular assay for diagnosis of light brown apple moth, Epiphyas postvittana (Walker) (Lepidoptera: Tortricidae), in North America is reported. The assay multiplexes two TaqMan real-time polymerase chain reaction (RT-PCR) probe systems that are designed to target DNA segments of the internal transcribed spacer region 2 (ITS2) and 18S rRNA gene. The RT-PCR probe designed for the 18S target recognizes a DNA sequence conserved in all of the moths included in the study and functions as a control in the assay. The second probe recognizes a segment of the ITS2 specifically found in E. postvittana and not found in the other moths included in the study, i.e., this segment is not conserved. Inclusion of the two markers in a single multiplex reaction did not affect assay performance. The assay was tested against 637 moths representing > 90 taxa in 15 tribes in all three subfamilies in the Tortricidae. The assay generated no false negatives based on analysis of 355 E. postvittana collected from California, Hawaii, England, New Zealand, and Australia. Analysis of a data set including 282 moths representing 41 genera generated no false positives. Only three inconclusive results were generated from the 637 samples. Spike experiments demonstrated that DNA contamination in the assay can affect samples differently. Contaminated samples analyzed with the ITS2 RT-PCR assay and DNA barcode methodology by using the cytochrome oxidase I gene can generate contradictory diagnoses.

  9. New Fossil Lepidoptera (Insecta: Amphiesmenoptera) from the Middle Jurassic Jiulongshan Formation of Northeastern China

    Science.gov (United States)

    Zhang, Weiting; Shih, Chungkun; Labandeira, Conrad C.; Sohn, Jae-Cheon; Davis, Donald R.; Santiago-Blay, Jorge A.; Flint, Oliver; Ren, Dong

    2013-01-01

    Background The early history of the Lepidoptera is poorly known, a feature attributable to an inadequate preservational potential and an exceptionally low occurrence of moth fossils in relevant mid-Mesozoic deposits. In this study, we examine a particularly rich assemblage of morphologically basal moths that contribute significantly toward the understanding of early lepidopteran biodiversity. Methodology/Principal Findings Our documentation of early fossil moths involved light- and scanning electron microscopic examination of specimens, supported by various illumination and specimen contrast techniques. A total of 20 moths were collected from the late Middle Jurassic Jiulongshan Formation in Northeastern China. Our principal results were the recognition and description of seven new genera and seven new species assigned to the Eolepidopterigidae; one new genus with four new species assigned to the Mesokristenseniidae; three new genera with three new species assigned to the Ascololepidopterigidae fam. nov.; and one specimen unassigned to family. Lepidopteran assignment of these taxa is supported by apomorphies of extant lineages, including the M1 vein, after separation from the M2 vein, subtending an angle greater than 60 degrees that is sharply angulate at the junction with the r–m crossvein (variable in Trichoptera); presence of a foretibial epiphysis; the forewing M vein often bearing three branches; and the presence of piliform scales along wing veins. Conclusions/Significance The diversity of these late Middle Jurassic lepidopterans supports a conclusion that the Lepidoptera–Trichoptera divergence occurred by the Early Jurassic. PMID:24278142

  10. De novo Families: Lesbian Motherhood.

    Science.gov (United States)

    Hayman, Brenda; Wilkes, Lesley

    2017-01-01

    The aim of this recent Australian study was to explore the experiences of lesbian women choosing motherhood. Participants included 30 self-identifying lesbian mothers. Data were collected via interviews, data collection sheets, and online journaling. The interview and journaling data were analyzed using constant comparative analysis and subsequently illuminated three main themes: becoming mothers, constructing motherhood, and legitimizing our family. These papers described the journey to motherhood and specifically explored the various methods of conception and other decisions that participants made when planning their family, the challenge of heteronormativity in health care, and legitimizing the role of the non-birth mother in de novo families. This article aims to present the participants' experiences of motherhood that was a constant topic found woven throughout all three of the identified themes. Participants identified that they had a unique opportunity to create their own mothering roles in the absence of significant "lesbian mother" role models and that they were able to adjust and to adapt their roles depending on fluctuating circumstances.

  11. De novo Transcriptome Analysis in Perennial Ryegrass

    DEFF Research Database (Denmark)

    Farrell, Jacqueline Danielle; Byrne, Stephen; Asp, Torben

    selection will be the availability of a reference genome, and efforts are underway within our group to deliver this. An important step in de novo assembly will be defining the gene set, and the availability of transcriptome sequencing data will greatly aid gene prediction and validation, and the development...... of functional markers for improved ryegrass breeding. Therefore, the goal of this study is to analyze a de novo assembly of the perennial ryegrass transcriptome from the same inbred genotype being used for de novo genome assembly. Furthermore, we also conducted de novo transcriptome assembly with other......Perennial ryegrass (Lolium perenne L.) is an important grass species for both forage and amenity purposes for temperate regions worldwide. It is envisaged that breeding efforts may be enhanced with the assistance of new breeding technologies such as genomic selection. A major step towards genomic...

  12. Blood, sweat, and tears: a review of the hematophagous, sudophagous, and lachryphagous Lepidoptera.

    Science.gov (United States)

    Plotkin, David; Goddard, Jerome

    2013-12-01

    Although adult Lepidoptera are not often considered medically relevant, some butterflies and moths are notorious for their consumption of mammalian body fluids. These Lepidoptera can be blood-feeding (hematophagous), tear-feeding (lachryphagous), or sweat-feeding (we use the term "sudophagous"). Blood-feeding Lepidoptera have been observed piercing the skin of their hosts during feeding, while tear-feeding Lepidoptera have been observed frequenting the eyes of hosts in order to directly obtain lachrymal fluid. These behaviors have negative human health implications and some potential for disease transmission. In this study, articles concerning feeding behavior of blood, sweat, and tear-feeding Lepidoptera were reviewed, with emphasis on correlations between morphological characters and feeding behaviors. Harmful effects and vector potential of these Lepidoptera are presented and discussed.

  13. Self-pollination rate and floral-display size in Asclepias syriaca (Common Milkweed) with regard to floral-visitor taxa.

    Science.gov (United States)

    Howard, Aaron F; Barrows, Edward M

    2014-06-23

    Animals fertilize thousands of angiosperm species whose floral-display sizes can significantly influence pollinator behavior and plant reproductive success. Many studies have measured the interactions among pollinator behavior, floral-display size, and plant reproductive success, but few studies have been able to separate the effects of pollinator behavior and post-pollination processes on angiosperm sexual reproduction. In this study, we utilized the highly self-incompatible pollinium-pollination system of Asclepias syriaca (Common Milkweed) to quantify how insect visitors influenced male reproductive success measured as pollen removal, female reproductive success measured as pollen deposition, and self-pollination rate. We also determined how floral-display size impacts both visitor behavior and self-pollination rate. Four insect taxonomic orders visited A. syriaca: Coleoptera, Diptera, Hymenoptera, and Lepidoptera. We focused on three groups of visitor taxa within two orders (Hymenoptera and Lepidoptera) with sample sizes large enough for quantitative analysis: Apis mellifera (Western Honey Bee), Bombus spp. (bumble bees) and lepidopterans (butterflies and moths). Qualitatively, lepidopterans had the highest pollinator importance values, but the large variability in the lepidopteran data precluded meaningful interpretation of much of their behavior. The introduced A. mellifera was the most effective and most important diurnal pollinator with regard to both pollen removal and pollen deposition. However, when considering the self-incompatibility of A. syriaca, A. mellifera was not the most important pollinator because of its high self-pollination rate as compared to Bombus spp. Additionally, the rate of self-pollination increased more rapidly with the number of flowers per inflorescence in A. mellifera than in the native Bombus spp. Apis mellifera's high rate of self-pollination may have significant negative effects on both male and female reproductive successes

  14. Análise comparativa de risco de câmbio e das taxas de juros na crise cambial de 1999

    Directory of Open Access Journals (Sweden)

    Hélio Rosseti Júnior

    2009-09-01

    Full Text Available É nos momentos de crise que os novos paradigmas surgem em substituição dos antigos, ocorrendo, assim, o renovar das formas de se entender os mecanismos de funcionamento da sociedade, as relações de produção e os modelos de consumo. A crise cambial brasileira de 1999 trouxe dificuldades para a população e para o país, exigindo mudanças de postura do governo e dos organismos da sociedade. A crise provocou uma retração de produção do Brasil, uma elevação dos juros e, por conseguinte, do endividamento do país. Uma crise que teve como centro a taxa de câmbio acabou tendo seus maiores desdobramentos nas taxas de juros, tanto do governo como no mercado. Este trabalho de pesquisa procura analisar o comportamento dos juros efetivamente praticados no mundo financeiro nacional, a partir da flutuação das taxas de câmbio, no ano da crise. Para tanto, são estudados os números diários e mensais de relatórios do Banco Central e os dados da evolução dessas taxas.

  15. Lepidoptera (Insecta) associated with soybean in Argentina, Brazil, Chile and Uruguay.

    OpenAIRE

    Aline Carraro Formentini; Daniel Ricardo Sosa-Gómez; Silvana Vieira de Paula-Moraes; Neiva Monteiro Barros; Alexandre Specht

    2015-01-01

    ABSTRACT: The present research updates the systematic position and nomenclature of Lepidoptera associated with soybean crops in Argentina, Brazil, Chile and Uruguay. Scientific literature lists 69 species of Lepidoptera feeding on soybean plants. These species are representatives of the Superfamilies Noctuoidea (31), Pyraloidea (13), Hesperioidea (12), Tortricoidea (5), Geometroidea (5), and Bombycoidea (3). Diversity of Lepidoptera associated to crop, injury in different parts of the plant, ...

  16. Fauna Simalurensis. Lepidoptera Rhopalocera: fam. Satyridae, Morphidae & Nymphalidae

    NARCIS (Netherlands)

    Eecke, van R.

    1913-01-01

    Continuing the enumeration of the Lepidoptera from Simalur and neighbouring islets, collected by Mr. Edw. Jacobson, I have to notice only one new form of Cethosia and of Acca among a number of 16 species of Nymphalidae. The Satyridae were represented by one species and the Morphidae by two.

  17. Identification to Lepidoptera Superfamily-under the microscope (Insecta)

    Science.gov (United States)

    There are 160,000 species of described Lepidoptera, or moths and butterflies, on Earth, although it is estimated that the number is closer to 500,000 species. Many moths from all over the world are intercepted at U.S. ports on a wide variety of economically important commodities. The purpose of t...

  18. A provisional annotated list of the Lepidoptera of Honduras

    Science.gov (United States)

    A biodiversity inventory of the Lepidoptera of Pico Bonito National Park and vicinity, in the Department of Atlantida of northern Honduras, has been initiated and will be conducted to obtain baseline data. We present a revised checklist of Honduran butterfly species (updated from the initial 1967 l...

  19. RNA interference in Lepidoptera: An overview of successful and unsuccessful

    NARCIS (Netherlands)

    Terenius, O.; Papanicolaou, A.; Garbutt, J.S.; Eleftherianos, I.; Huvenne, H.; Kanginakudru, S.; Albrechtsen, M.; An, Chunju; Aymeric, J.L.; Barthel, A.; Bebas, P.; Bitra, K.; Bravo, A.; Chevalier, F.; Collinge, D.P.; Crava, C.M.; Maagd, de R.A.; Duvic, B.; Erlandson, M.; Faye, I.; Felfoldi, G.; Fujiwara, H.; Futahashi, R.; Gandhe, A.S.; Gatehouse, H.S.; Gatehouse, L.N.; Giebultowicz, J.M.; Gomez, I.; Grimmelikhuijzen, C.J.P.; Groot, A.T.; Hauser, F.; Heckel, D.G.; Hegedus, D.D.; Hrycaj, S.; Huang, L.; Hull, J.J.; Iatrou, K.; Iga, M.; Kanost, M.R.; Kotwica, J.; Li, Changyou; Li, Jianghong; Liu, Jisheng; Lundmark, M.; Matsumoto, S.; Meyering-Vos, M.; Millichap, P.J.; Monteiro, A.; Mrinal, N.; Niimi, T.; Nowara, D.; Ohnishi, A.; Oostra, V.; Ozaki, K.; Papakonstantinou, M.; Popadic, A.; Rajam, M.V.; Saenko, S.; Simpson, R.M.; Soberon, M.; Strand, M.R.; Tomita, S.; Toprak, U.; Wang, Ping; Wee, Choon Wei; Whyard, S.; Zhang, Wenqing; Nagaraju, J.; Ffrench-Constant, R.H.; Herrero, S.; Gordon, K.; Swevers, L.; Smagghe, G.

    2011-01-01

    Gene silencing through RNA interference (RNAi) has revolutionized the study of gene function, particularly in non-model insects. However, in Lepidoptera (moths and butterflies) RNAi has many times proven to be difficult to achieve. Most of the negative results have been anecdotal and the positive ex

  20. A new species of Isopsestis (Lepidoptera: Thyatiridae) from Yunnan, China.

    Science.gov (United States)

    Zhuang, Hailing; Owada, Mamoru; Wang, Min

    2015-08-19

    A new species of genus Isopsestis Werny, 1968 (Lepidoptera: Thyatiridae), Isopsestis poculiformis sp. nov., is described from the locality 2660m elevation in Northeast Yunnan, China, and compared with its closest ally. Male adult and genitalia of the new species are illustrated and a distribution map of the genus Isopsestis Werny, 1968 is provided.

  1. COMPARISON OF SAMPLING TECHNIQUES USED IN STUDYING LEPIDOPTERA POPULATION DYNAMICS

    Science.gov (United States)

    Four methods (light traps, foliage samples, canvas bands, and gypsy moth egg mass surveys) that are used to study the population dynamics of foliage-feeding Lepidoptera were compared for 10 species, including gypsy moth, Lymantria dispar L. Samples were collected weekly at 12 sit...

  2. Two new Gelechiidae for the Iberian Peninsula (Lepidoptera: Gelechiidae)

    DEFF Research Database (Denmark)

    Karsholt, Ole; Vives Moreno, Antonio

    2014-01-01

    Two new species of Gelechiidae, Chrysoesthia hispanica Karsholt & Vives, sp. n. from Spain and Neofriseria hitadoella Karsholt & Vives, sp. n. from Spain and Portugal are described. The adults and male and female genitalia are illustrated. The generic assignment of C. hispanica is discussed. KEY ...... WORD: Lepidoptera, Gelechiidae, new species, Iberian peninsula....

  3. The Tortricidae described by J. C. Fabricius (Lepidoptera)

    DEFF Research Database (Denmark)

    Baixeras, Joaquin; Karsholt, Ole

    2011-01-01

    The identity and nomenclature of the 88 species of Tortricidae (Lepidoptera) described by J. C. Fabricius are reviewed. Type material deposited in the Natural History Museum Denmark is illustrated. Lectotypes for Tinea compositella (Fabricius, 1775), Pyralis rivellana (Fabricius, 1775) and P...

  4. Molecular analysis of the muscle protein projectin in Lepidoptera.

    Science.gov (United States)

    Ayme-Southgate, A J; Turner, L; Southgate, R J

    2013-01-01

    Striated muscles of both vertebrates and insects contain a third filament composed of the giant proteins, namely kettin and projectin (insects) and titin (vertebrates). All three proteins have been shown to contain several domains implicated in conferring elasticity, in particular a PEVK segment. In this study, the characterization of the projectin protein in the silkmoth, Bombyx mori L. (Lepidoptera: Bombycidae), and the monarch butterfly, Danaus plexippus L. (Lepidoptera: Nymphalidae), as well as a partial characterization in the Carolina sphinx, Manduca sexta L. (Lepidoptera: Sphingidae), are presented. This study showed that, similar to other insects, projectin's overall modular organization was conserved, but in contrast, the PEVK region had a highly divergent sequence. The analysis of alternative splicing in the PEVK region revealed a small number of possible isoforms and the lack of a flight-muscle specific variant, both characteristics being in sharp contrast with findings from other insects. The possible correlation with difference in flight muscle stiffness and physiology between Lepidoptera and other insect orders is discussed.

  5. Biogeography and ecology of southern Portuguese butterflies and burnets (Lepidoptera)

    NARCIS (Netherlands)

    Schmitt, T.

    2003-01-01

    Biogeography and ecology of southern Portuguese butterflies and burnets (Lepidoptera) During several visits to the western part of the Algarve (southern Portugal), the author mapped the butterflies and burnets of this region. In total, I observed 58 butterfly species (51 Papilionoidea, 7

  6. Phenology of blue cactus moth Melitara prodenialis (Lepidoptera: Pyralidae)

    Science.gov (United States)

    Native cactus plants (Opuntia stricta Haw. [Cactaceae]) were sampled weekly at St. Marks National Wildlife Refuge, St. Marks, Florida (30.16 - 30° 1' N, -84.21 - 84° 1' W) from September 2006 to September 2007 for the native blue cactus moth, Melitara prodenialis Walker (Lepidoptera: Pyralidae) Meli...

  7. Fauna Simalurensis. Lepidoptera Rhopalocera: fam. Satyridae, Morphidae & Nymphalidae

    NARCIS (Netherlands)

    Eecke, van R.

    1913-01-01

    Continuing the enumeration of the Lepidoptera from Simalur and neighbouring islets, collected by Mr. Edw. Jacobson, I have to notice only one new form of Cethosia and of Acca among a number of 16 species of Nymphalidae. The Satyridae were represented by one species and the Morphidae by two. Accordin

  8. Biogeography and ecology of southern Portuguese butterflies and burnets (Lepidoptera)

    NARCIS (Netherlands)

    Schmitt, T.

    2003-01-01

    Biogeography and ecology of southern Portuguese butterflies and burnets (Lepidoptera) During several visits to the western part of the Algarve (southern Portugal), the author mapped the butterflies and burnets of this region. In total, I observed 58 butterfly species (51 Papilionoidea, 7 Hesperiidae

  9. Lonomia obliqua Walker (Lepidoptera: Saturniidae: hemostasis implications

    Directory of Open Access Journals (Sweden)

    Silviane Maggi

    2015-06-01

    Full Text Available Summary In southern Brazil, since 1989, several cases of accidents produced by unwilling contact with the body of poisonous caterpillars of the moth species Lonomia obliqua Walker, 1855 (Lepidoptera: Saturniidae, were described. L. obliqua caterpillars have gregarious behavior and feed on leaves of host trees during the night, staying grouped in the trunk during the day, which favors the occurrence of accidents with the species. This caterpillar has the body covered with bristles that on contact with the skin of individuals, breaks and release their contents, inoculating the venom into the victim. The basic constitution of the venom is protein and its components produce physiological changes in the victim, which include disturbances in hemostasis. Hemorrhagic syndrome associated with consumption coagulopathy, intravascular hemolysis and acute renal failure are some of the possible clinical manifestations related to poisoning by L. obliqua. Specific laboratory tests for diagnosis of poisoning have not been described previously. The diagnosis of poisoning is made based on the patient's medical history, clinical manifestations, erythrocyte levels, and, primarily, parameters that evaluate blood coagulation. Treatment is performed with the use of supportive care and the administration of specific hyperimmune antivenom. Poisoning can be serious and even fatal.

  10. Stochastic Models for Phylogenetic Trees on Higher-order Taxa

    CERN Document Server

    Aldous, David; Popovic, Lea

    2007-01-01

    Simple stochastic models for phylogenetic trees on species have been well studied. But much paleontology data concerns time series or trees on higher-order taxa, and any broad picture of relationships between extant groups requires use of higher-order taxa. A coherent model for trees on (say) genera should involve both a species-level model and a model for the classification scheme by which species are assigned to genera. We present a general framework for such models, and describe three alternate classification schemes. Combining with the species-level model of Aldous-Popovic (2005), one gets models for higher-order trees, and we initiate analytic study of such models. In particular we derive formulas for the lifetime of genera, for the distribution of number of species per genus, and for the offspring structure of the tree on genera.

  11. Endemic taxa of vascular plants in the Polish Carpathians

    Directory of Open Access Journals (Sweden)

    Halina Piękoś-Mirkowa

    2011-01-01

    Full Text Available The Carpathians, particularly their highest massif, the Tatra Mountains, exhibit the greatest richness of endemics in Poland. The present paper is a critical recapitulation of existing knowledge of endemism among the vascular plants of the Polish part of the Carpathians. It comprises a list of all 110 taxa (49 species, 26 microspecies of the genus Alchemilla and 35 conspicuous subspecies that can be considered Carpathian endemics or subendemics. Their distribution, vertical ranges and habitats are characterized.

  12. Seed and germination characteristics of wild Onobrychis taxa in Turkey

    OpenAIRE

    AVCI, Süleyman; KAYA, Mehmet Demir

    2013-01-01

    Turkey is of great importance for the biodiversity of genus Onobrychis Adans. and hosts 55 species that are adapted to dry and poor environments. This study was conducted to evaluate 35 Onobrychis taxa in terms of 1000-seed weight, germination percentage, mean germination time, and hard and swollen seeds and to determine the suitability of mechanical scarification for dormancy breaking in species with hard or impermeable seed coats. Seed dormancy was detected in 19 of the investigated species...

  13. Taxa de câmbio social e abertura comercial

    Directory of Open Access Journals (Sweden)

    Léo da Rocha Ferreira

    2005-12-01

    Full Text Available O objetivo geral deste artigo é avaliar o impacto da abertura comercial brasileira na taxa de câmbio social. O seu objetivo específico é desenvolver e calcular uma medida apropriada para a taxa de câmbio social a ser utilizada na análise de projetos de investimentos no Brasil. Utilizando um modelo de custo de oportunidade da divisa para estimar taxa de câmbio social, o estudo conclui que não houve alteração importante no ordenamento das atividades econômicas segundo o grau de proteção efetiva. A tendência declinante da taxa de câmbio social é resultado da abertura comercial iniciada no final dos anos oitenta e da mudança da política cambial brasileira de janeiro de 1999.The purpose of this paper is to analyze the impact of the trade liberalization process on social exchange rates in Brazil. The main objective is to develop and estimate an appropriate measure for the social exchange rates to be used in the evaluation of investment projects in Brazil. Using an opportunity cost for foreign exchange model to estimate the social exchange rates, the study concludes that there were no important modifications in the ranking of economic activities according to the rates of effective protection. The impact of the trade liberalization process and the change in exchange rate policy regime will only be fully measured in the medium and long run. However, an indication of its effects on the social exchange rates can clearly be observed by the declining tendency of the social exchange rates.

  14. Leaf structural adaptations of two Limonium miller (Plumbaginales, Plumbaginaceae taxa

    Directory of Open Access Journals (Sweden)

    Zorić Lana N.

    2013-01-01

    Full Text Available Limonium gmelinii (Willd. O. Kuntze 1891 subsp. hungaricum (Klokov Soó is Pannonian endemic subspecies that inhabits continental halobiomes, while Limonium anfractum (Salmon Salmon 1924 is one of the indicators of halophyte vegetation of marine rocks and its distribution is restricted to the southern parts of Mediterranean Sea coast. In this work, micromorphological and anatomical characters of leaves of these two Limonium taxa were analyzed, in order to examine their adaptations to specific environmental conditions on saline habitats. The results showed that both taxa exhibited strong xeromorphic adaptations that reflected in flat cell walls of epidermal cells, thick cuticle, high palisade/spongy tissue ratio, high index of palisade cells, the presence of sclereid idioblasts in leaf mesophyll and mechanical tissue by phloem and xylem. Both taxa are crynohalophytes and have salt glands on adaxial and abaxial epidermis for excretion of surplus salt. Relatively high dimensions of mesophyll cells, absence of non-glandular hairs and unprotected stomata slightly increased above the level of epidermal cells, are also adaptations to increased salinity. [Projekat Ministarstva nauke Republike Srbije, br. 173002

  15. Mortality of the defoliator Euselasia eucerus (Lepidoptera: Riodinidae by biotic factors in an Eucalyptus urophylla plantation in Minas Gerais State, Brazil

    Directory of Open Access Journals (Sweden)

    José C. Zanuncio

    2009-03-01

    Full Text Available Euselasia eucerus (Hewitson, 1872 (Lepidoptera: Riodinidae is a Brazilian native species commonly found in Eucalyptus plantations. Biotic mortality factors of this defoliator were studied in a Eucalyptus urophylla plantation in Minas Gerais State, Brazil aiming to identify natural enemies and their impact on this insect. Euselasia eucerus had biotic mortality factors during all development stages. The most important were Trichogramma maxacalii Voegelé and Pointel, 1980 (Hymenoptera: Trichogrammatidae during egg stage (48.9%, a tachinid fly (Diptera: Tachinidae during larval stages (10% and Itoplectis sp. (Hymenoptera: Ichneumonidae during pupal stage (52.2%. The parasitism rate was higher in the basal part of the plant canopy (37.8%.Euselasia eucerus (Hewitson, 1872 (Lepidoptera: Riodinidae é uma espécie brasileira nativa, comumente encontrada em plantios de Eucalyptus. Um estudo da mortalidade por fatores bióticos desse desfolhador foi feito em um plantio de Eucalyptus urophylla no Estado de Minas Gerais, Brasil, com o objetivo de identificar os inimigos naturais e seu impacto sobre esse lepidóptero. Euselasia eucerus possui fatores bióticos de mortalidade durante todas as suas fases de desenvolvimento. Os mais importantes foram Trichogramma maxacalii Voegelé e Pointel, 1980 (Hymenoptera: Trichogrammatidae durante a fase de ovo (48,9%, um Diptera: Tachinidae durante a fase de larva (10% e Itoplectis sp. (Hymenoptera: Ichneumonidae durante a fase pupal (52,2%. A taxa de parasitismo foi mais elevada na parte basal de plantas de eucalipto (37,8%.

  16. Can deliberately incomplete gene sample augmentation improve a phylogeny estimate for the advanced moths and butterflies (Hexapoda: Lepidoptera)?

    Science.gov (United States)

    Cho, Soowon; Zwick, Andreas; Regier, Jerome C; Mitter, Charles; Cummings, Michael P; Yao, Jianxiu; Du, Zaile; Zhao, Hong; Kawahara, Akito Y; Weller, Susan; Davis, Donald R; Baixeras, Joaquin; Brown, John W; Parr, Cynthia

    2011-12-01

    This paper addresses the question of whether one can economically improve the robustness of a molecular phylogeny estimate by increasing gene sampling in only a subset of taxa, without having the analysis invalidated by artifacts arising from large blocks of missing data. Our case study stems from an ongoing effort to resolve poorly understood deeper relationships in the large clade Ditrysia ( > 150,000 species) of the insect order Lepidoptera (butterflies and moths). Seeking to remedy the overall weak support for deeper divergences in an initial study based on five nuclear genes (6.6 kb) in 123 exemplars, we nearly tripled the total gene sample (to 26 genes, 18.4 kb) but only in a third (41) of the taxa. The resulting partially augmented data matrix (45% intentionally missing data) consistently increased bootstrap support for groupings previously identified in the five-gene (nearly) complete matrix, while introducing no contradictory groupings of the kind that missing data have been predicted to produce. Our results add to growing evidence that data sets differing substantially in gene and taxon sampling can often be safely and profitably combined. The strongest overall support for nodes above the family level came from including all nucleotide changes, while partitioning sites into sets undergoing mostly nonsynonymous versus mostly synonymous change. In contrast, support for the deepest node for which any persuasive molecular evidence has yet emerged (78-85% bootstrap) was weak or nonexistent unless synonymous change was entirely excluded, a result plausibly attributed to compositional heterogeneity. This node (Gelechioidea + Apoditrysia), tentatively proposed by previous authors on the basis of four morphological synapomorphies, is the first major subset of ditrysian superfamilies to receive strong statistical support in any phylogenetic study. A "more-genes-only" data set (41 taxa×26 genes) also gave strong signal for a second deep grouping (Macrolepidoptera

  17. A large-scale, higher-level, molecular phylogenetic study of the insect order Lepidoptera (moths and butterflies.

    Directory of Open Access Journals (Sweden)

    Jerome C Regier

    Full Text Available Higher-level relationships within the Lepidoptera, and particularly within the species-rich subclade Ditrysia, are generally not well understood, although recent studies have yielded progress. We present the most comprehensive molecular analysis of lepidopteran phylogeny to date, focusing on relationships among superfamilies.483 taxa spanning 115 of 124 families were sampled for 19 protein-coding nuclear genes, from which maximum likelihood tree estimates and bootstrap percentages were obtained using GARLI. Assessment of heuristic search effectiveness showed that better trees and higher bootstrap percentages probably remain to be discovered even after 1000 or more search replicates, but further search proved impractical even with grid computing. Other analyses explored the effects of sampling nonsynonymous change only versus partitioned and unpartitioned total nucleotide change; deletion of rogue taxa; and compositional heterogeneity. Relationships among the non-ditrysian lineages previously inferred from morphology were largely confirmed, plus some new ones, with strong support. Robust support was also found for divergences among non-apoditrysian lineages of Ditrysia, but only rarely so within Apoditrysia. Paraphyly for Tineoidea is strongly supported by analysis of nonsynonymous-only signal; conflicting, strong support for tineoid monophyly when synonymous signal was added back is shown to result from compositional heterogeneity.Support for among-superfamily relationships outside the Apoditrysia is now generally strong. Comparable support is mostly lacking within Apoditrysia, but dramatically increased bootstrap percentages for some nodes after rogue taxon removal, and concordance with other evidence, strongly suggest that our picture of apoditrysian phylogeny is approximately correct. This study highlights the challenge of finding optimal topologies when analyzing hundreds of taxa. It also shows that some nodes get strong support only when

  18. DNA barcoding as a screening tool for cryptic diversity: an example from Caryocolum, with description of a new species (Lepidoptera, Gelechiidae

    Directory of Open Access Journals (Sweden)

    Peter Huemer

    2014-04-01

    Full Text Available We explore the potential value of DNA barcode divergence for species delimitation in the genus Caryocolum Gregor & Povolný, 1954 (Lepidoptera, Gelechiidae, based on data from 44 European species (including 4 subspecies. Low intraspecific divergence of the DNA barcodes of the mtCOI (cytochrome c oxidase 1 gene and/or distinct barcode gaps to the nearest neighbor support species status for all examined nominal taxa. However, in 8 taxa we observed deep splits with a maximum intraspecific barcode divergence beyond a threshold of 3%, thus indicating possible cryptic diversity. The taxonomy of these taxa has to be re-assessed in the future. We investigated one such deep split in Caryocolum amaurella (Hering, 1924 and found it in congruence with yet unrecognized diagnostic morphological characters and specific host-plants. The integrative species delineation leads to the description of Caryocolum crypticum sp. n. from northern Italy, Switzerland and Greece. The new species and the hitherto intermixed closest relative C. amaurella are described in detail and adults and genitalia of both species are illustrated and a lectotype of C. amaurella is designated; a diagnostic comparison of the closely related C. iranicum Huemer, 1989, is added.

  19. DNA barcoding as a screening tool for cryptic diversity: an example from Caryocolum, with description of a new species (Lepidoptera, Gelechiidae).

    Science.gov (United States)

    Huemer, Peter; Karsholt, Ole; Mutanen, Marko

    2014-01-01

    We explore the potential value of DNA barcode divergence for species delimitation in the genus Caryocolum Gregor & Povolný, 1954 (Lepidoptera, Gelechiidae), based on data from 44 European species (including 4 subspecies). Low intraspecific divergence of the DNA barcodes of the mtCOI (cytochrome c oxidase 1) gene and/or distinct barcode gaps to the nearest neighbor support species status for all examined nominal taxa. However, in 8 taxa we observed deep splits with a maximum intraspecific barcode divergence beyond a threshold of 3%, thus indicating possible cryptic diversity. The taxonomy of these taxa has to be re-assessed in the future. We investigated one such deep split in Caryocolum amaurella (Hering, 1924) and found it in congruence with yet unrecognized diagnostic morphological characters and specific host-plants. The integrative species delineation leads to the description of Caryocolum crypticum sp. n. from northern Italy, Switzerland and Greece. The new species and the hitherto intermixed closest relative C. amaurella are described in detail and adults and genitalia of both species are illustrated and a lectotype of C. amaurella is designated; a diagnostic comparison of the closely related C. iranicum Huemer, 1989, is added.

  20. Redescription of Campoletis sonorensis (Cameron, 1886) (Hymenoptera, Ichneumonidae, Campopleginae), parasitoid of Spodoptera frugiperda (J. E. Smith, 1797) (Lepidoptera, Noctuidae) in Brazil.

    Science.gov (United States)

    Camargo, L F; Brito, R A; Penteado-Dias, A M

    2015-11-01

    The fall armyworm Spodoptera frugiperda (Lepidoptera; Noctuidae) is a voracious pest of numerous crops of economic importance throughout the New World. In Brazil, its larvae are attacked by several species of parasitoid wasps, making them potential candidate as biological control agents against this pest. A survey of the parasitoid fauna on S. frugiperda in maize crops throughout Brazil reveals two species of Campoletis, which are morphologicaly very similar species. In this paper we combine these data with pictures from the type material of C. sonorensis and C. flavicincta, as well as their descriptions to provide a redescription to Campoletis sonorensis (Cameron, 1886) using for this both morphological characters and DNA Barcoding (Hebert et al., 2003) information, in an attempt to help with the correct identification of the taxa to improve biological control studies.

  1. Redescription of Campoletis sonorensis (Cameron, 1886 (Hymenoptera, Ichneumonidae, Campopleginae, parasitoid of Spodoptera frugiperda (J. E. Smith, 1797 (Lepidoptera, Noctuidae in Brazil

    Directory of Open Access Journals (Sweden)

    L. F. Camargo

    Full Text Available Abstract The fall armyworm Spodoptera frugiperda (Lepidoptera; Noctuidae is a voracious pest of numerous crops of economic importance throughout the New World. In Brazil, its larvae are attacked by several species of parasitoid wasps, making them potential candidate as biological control agents against this pest. A survey of the parasitoid fauna on S. frugiperda in maize crops throughout Brazil reveals two species of Campoletis, which are morphologicaly very similar species. In this paper we combine these data with pictures from the type material of C. sonorensis and C. flavicincta, as well as their descriptions to provide a redescription to Campoletis sonorensis (Cameron, 1886 using for this both morphological characters and DNA Barcoding (Hebert et al., 2003 information, in an attempt to help with the correct identification of the taxa to improve biological control studies.

  2. Reassessment of the systematic position of Orthocomotis DOGNIN (Lepidoptera: Tortricidae) based on molecular data with description of new species of Euliini.

    Science.gov (United States)

    Razowski, Józef; Tarcz, Sebastian; Wojtusiak, Janusz; Pelz, Volker

    2013-01-01

    The application of molecular analyses for resolving taxonomic problems in the family Torticidae (Lepidoptera) is still uncommon. The majority of papers concern the assessment of population variability of economically important species; reports on the systematic positions ofNeotropical Tortricidae taxa are rare. The Neotropical genus Orthocomotis was classified initially as a member of the tribe Euliini. Then, based on genital morphology, it was moved to the tribe Polyorthini. A comparison of homologous 606 bp fragments of the COI mitochondrial gene revealed that Orthocomotis should be transfered back into the tribe Euliini. Based on an analysis ofphylogenetic relationships the studied genera of Euliini form a monophyletic cluster, clearly separated from tribe Polyorthini in which they were temporarily included. Moreover, in the current paper we describe two new species of the tribe Euliini: Galomecalpa lesta RAZOWSKI & PELZ, sp. n., Gauruncus ischyros RAZOWSKI & PELZ, sp. n.

  3. Proteomics-grade de novo sequencing approach

    DEFF Research Database (Denmark)

    Savitski, Mikhail M; Nielsen, Michael L; Kjeldsen, Frank

    2005-01-01

    known proteins, complete de novo sequencing of their peptides is desired. The main problems of conventional sequencing based on tandem mass spectrometry are incomplete backbone fragmentation and the frequent overlap of fragment masses. In this work, the first proteomics-grade de novo approach...... is presented, where the above problems are alleviated by the use of complementary fragmentation techniques CAD and ECD. Implementation of a high-current, large-area dispenser cathode as a source of low-energy electrons provided efficient ECD of doubly charged peptides, the most abundant species (65...

  4. Ithomiini butterflies (Lepidoptera: Hymphalidae) of Antioquia, Colombia.

    Science.gov (United States)

    Giraldo, C E; Willmott, K R; Vila, R; Uribe, S I

    2013-04-01

    Colombia is one of the most biodiverse countries on the planet. However, economic and scientific investment in completing inventories of its biodiversity has been relatively poor in comparison with other Neotropical countries. Butterflies are the best studied group of invertebrates, with the highest proportion of known to expected species. More than 3,200 species of butterflies have been recorded in Colombia, although the study of the still many unexplored areas will presumably increase this number. This work provides a list of Ithomiini butterflies collected in the department of Antioquia and estimates the total number of species present, based on revision of entomological collections, records in the literature and field work performed between 2003 and 2011. The list includes 99 species and 32 genera, representing 27% of all Ithomiini species. We report 50 species of Ithomiini not formerly listed from Antioquia, and found the highest diversity of ithomiine species to be at middle elevations (900-1,800 m). The mean value of the Chao2 estimator for number of species in Antioquia is 115 species, which is close to a predicted total of 109 based on known distributions of other Ithomiini not yet recorded from the department. Nine species are potentially of particular conservation importance because of their restricted distributions, and we present range maps for each species. We also highlight areas in Antioquia with a lack of biodiversity knowledge to be targeted in future studies. This paper contributes to mapping the distribution of the Lepidoptera of Antioquia department in particular and of Colombia in general.

  5. Three-dimensional Magnetic Resonance Imaging of fossils across taxa

    Directory of Open Access Journals (Sweden)

    D. Mietchen

    2008-01-01

    Full Text Available The frequency of life forms in the fossil record is largely determined by the extent to which they were mineralised at the time of their death. In addition to mineral structures, many fossils nonetheless contain detectable amounts of residual water or organic molecules, the analysis of which has become an integral part of current palaeontological research. The methods available for this sort of investigations, though, typically require dissolution or ionisation of the fossil sample or parts thereof, which is an issue with rare taxa and outstanding materials like pathological or type specimens. In such cases, non-destructive techniques could provide a valuable methodological alternative. While Computed Tomography has long been used to study palaeontological specimens, a number of complementary approaches have recently gained ground. These include Magnetic Resonance Imaging (MRI which had previously been employed to obtain three-dimensional images of pathological belemnites non-invasively on the basis of intrinsic contrast. The present study was undertaken to investigate whether 1H MRI can likewise provide anatomical information about non-pathological belemnites and specimens of other fossil taxa. To this end, three-dimensional MR image series were acquired from intact non-pathological invertebrate, vertebrate and plant fossils. At routine voxel resolutions in the range of several dozens to some hundreds of micrometers, these images reveal a host of anatomical details and thus highlight the potential of MR techniques to effectively complement existing methodological approaches for palaeontological investigations in a wide range of taxa. As for the origin of the MR signal, relaxation and diffusion measurements as well as 1H and 13C MR spectra acquired from a belemnite suggest intracrystalline water or hydroxyl groups, rather than organic residues.

  6. Brachymeria pandora (Crawford (Hymenoptera, Chalcididae: a new parasitoid of Historis odius (Fabricius (Lepidoptera, Nymphalidae

    Directory of Open Access Journals (Sweden)

    Hélcio R. Gil-Santana

    2005-12-01

    Full Text Available The first record of parasitism of Brachymeria pandora (Crawford, 1914 (Hymenoptera, Chalcididae on Historis odius (Fabricius, 1775 (Lepidoptera, Nymphalidae in the State of Rio de Janeiro, Brazil is presented.Apresenta-se o primeiro registro de parasitismo de Brachymeria pandora (Crawford, 1914 (Hymenoptera, Chalcididae em Historis odius (Fabricius, 1775 (Lepidoptera, Nymphalidae, no estado do Rio de Janeiro, Brasil.

  7. Trophic ecology of Lepidoptera larvae associated with woody vegetation in a savanna ecosystem

    CSIR Research Space (South Africa)

    Scholtz, CH

    1982-06-01

    Full Text Available This study represents a quantitative survey of a Lepidoptera community and deals with the trophic ecology of the 27 species of foliage-feeding Lepidoptera on the eight dominant woody plants in the Burkea africana-Eragrostis pallens savanna...

  8. Strepsicrates smithiana Walsingham (Lepidoptera, Tortricidae: first record from Chile and a newly documented host plant

    Directory of Open Access Journals (Sweden)

    Héctor A. Vargas

    2012-09-01

    Full Text Available Strepsicrates smithiana Walsingham (Lepidoptera, Tortricidae: first record from Chile and a newly documented host plant. Strepsicrates smithiana Walsingham, 1892 (Lepidoptera, Tortricidae is recorded for the first time from Chile. Male and female adults were reared from leaf-tying larvae collected on Myrica pavonis (Myricaceae, which is a new host plant record for S. smithiana.

  9. Variability of essential oil content of Mentha L. taxa

    Directory of Open Access Journals (Sweden)

    Jarmila Neugebauerová

    2012-01-01

    Full Text Available Species of genus Mentha L. can be described like herbs with many possibilities to use in industry and pharmacology. The most important product is essential oil. For commercially cultivating of species Mentha L. is variability of essential oil content very important characteristic. Variability of essential oil yield of twelve different taxa were monitored for four years. Essential oils were obtained via hydro-distillation and expressed as ml/kg. The highest variability of essential oil content during monitored period showed sample Pulegium vulgare and the lowest variability of essential oil content showed Mentha spicata.

  10. New colporate pollen taxa from Neyveli lignite, South India

    Energy Technology Data Exchange (ETDEWEB)

    Singh, A.; Misra, B.K. (Birbal Sahni Institute of Palaeobotany, Lucknow (India))

    1991-02-19

    Four new pollen genera: {ital Bacuspinulopollenites} {ital Cuddaloripollis}, {ital Scrobiculatricolporites}, {ital Tamilipollenites} and seven new species from the subsurface lignite samples of the Mine III area of the Neyveli Lignite Field are described. {ital Tricolporopilites} (Kar and Saxena) Kar 1985 is amended and three new species {ital T. uniformis}, {ital T. differentialis} and {ital T. tectatus} are assigned to it. These colporate angiospermous pollen taxa provide additional information on the palynofloral composition of the main lignite seam encountered in three boreholes. 19 refs., 5 figs.

  11. Modular Engineering Concept at Novo Nordisk Engineering

    DEFF Research Database (Denmark)

    Moelgaard, Gert; Miller, Thomas Dedenroth

    1997-01-01

    This report describes the concept of a new engineering method at Novo Nordisk Engineering: Modular Engineering (ME). Three tools are designed to support project phases with different levels of detailing and abstraction. ME supports a standard, cross-functional breakdown of projects that facilitates...

  12. Modular Engineering Concept at Novo Nordisk Engineering

    DEFF Research Database (Denmark)

    Moelgaard, Gert; Miller, Thomas Dedenroth

    1997-01-01

    This report describes the concept of a new engineering method at Novo Nordisk Engineering: Modular Engineering (ME). Three tools are designed to support project phases with different levels of detailing and abstraction. ME supports a standard, cross-functional breakdown of projects that facilitates...

  13. De novo mutations in epileptic encephalopathies

    NARCIS (Netherlands)

    Allen, Andrew S.; Berkovic, Samuel F.; Cossette, Patrick; Delanty, Norman; Dlugos, Dennis; Eichler, Evan E.; Epstein, Michael P.; Glauser, Tracy; Goldstein, David B.; Han, Yujun; Heinzen, Erin L.; Hitomi, Yuki; Howell, Katherine B.; Johnson, Michael R.; Kuzniecky, Ruben; Lowenstein, Daniel H.; Lu, Yi-Fan; Madou, Maura R. Z.; Marson, Anthony G.; Mefford, Heather C.; Nieh, Sahar Esmaeeli; O'Brien, Terence J.; Ottman, Ruth; Petrovski, Slave; Poduri, Annapurna; Ruzzo, Elizabeth K.; Scheffer, Ingrid E.; Sherr, Elliott H.; Yuskaitis, Christopher J.; Abou-Khalil, Bassel; Alldredge, Brian K.; Bautista, Jocelyn F.; Berkovic, Samuel F.; Boro, Alex; Cascino, Gregory D.; Consalvo, Damian; Crumrine, Patricia; Devinsky, Orrin; Dlugos, Dennis; Epstein, Michael P.; Fiol, Miguel; Fountain, Nathan B.; French, Jacqueline; Friedman, Daniel; Geller, Eric B.; Glauser, Tracy; Glynn, Simon; Haut, Sheryl R.; Hayward, Jean; Helmers, Sandra L.; Joshi, Sucheta; Kanner, Andres; Kirsch, Heidi E.; Knowlton, Robert C.; Kossoff, Erich; Kuperman, Rachel; Kuzniecky, Ruben; Lowenstein, Daniel H.; McGuire, Shannon M.; Motika, Paul V.; Novotny, Edward J.; Ottman, Ruth; Paolicchi, Juliann M.; Parent, Jack M.; Park, Kristen; Poduri, Annapurna; Scheffer, Ingrid E.; Shellhaas, Renee A.; Sherr, Elliott H.; Shih, Jerry J.; Singh, Rani; Sirven, Joseph; Smith, Michael C.; Sullivan, Joseph; Thio, Liu Lin; Venkat, Anu; Vining, Eileen P. G.; Von Allmen, Gretchen K.; Weisenberg, Judith L.; Widdess-Walsh, Peter; Winawer, Melodie R.

    2013-01-01

    Epileptic encephalopathies are a devastating group of severe childhood epilepsy disorders for which the cause is often unknown(1). Here we report a screen for de novo mutations in patients with two classical epileptic encephalopathies: infantile spasms (n = 149) and Lennox-Gastaut syndrome (n = 115)

  14. The evolutionary reality of higher taxa in mammals.

    Science.gov (United States)

    Humphreys, Aelys M; Barraclough, Timothy G

    2014-05-22

    Species are generally regarded as a fundamental unit of biodiversity. By contrast, higher taxa such as genera and families, while widely used as biodiversity metrics and for classification and communication, are generally not believed to be shaped by shared evolutionary processes in the same way as species. We use simulations to show that processes which are important for emergence of evolutionarily significant units (ESUs) at the species level, namely geographical isolation and ecological divergence, can generate evolutionary independence above the species level and thereby lead to emergence of discrete phylogenetic clusters (higher ESUs). Extending phylogenetic approaches for delimiting evolutionarily significant species to broader phylogenetic scales, we find evidence for the existence of higher ESUs in mammals. In carnivores, euungulates and lagomorphs the hierarchical level of units detected correspond, on average, to the level of family or genus in traditional taxonomy. The units in euungulates are associated with divergent patterns of body mass, consistent with occupation of distinct ecological zones. Our findings demonstrate a new framework for studying biodiversity that unifies approaches at species and higher levels, thus potentially restoring higher taxa to their historical status as natural entities.

  15. Sensitivities of extant animal taxa to ocean acidification

    Science.gov (United States)

    Wittmann, Astrid C.; Pörtner, Hans-O.

    2013-11-01

    Anthropogenic CO2 emitted to the atmosphere is absorbed by the oceans, causing a progressive increase in ocean inorganic carbon concentrations and resulting in decreased water pH and calcium carbonate saturation. This phenomenon, called ocean acidification, is in addition to the warming effects of CO2 emissions. Ocean acidification has been reported to affect ocean biota, but the severity of this threat to ocean ecosystems (and humans depending on these ecosystems) is poorly understood. Here we evaluate the scale of this threat in the context of widely used representative concentration pathways (RCPs) by analysing the sensitivities of five animal taxa (corals, echinoderms, molluscs, crustaceans and fishes) to a wide range of CO2 concentrations. Corals, echinoderms and molluscs are more sensitive to RCP8.5 (936 ppm in 2100) than are crustaceans. Larval fishes may be even more sensitive than the lower invertebrates, but taxon sensitivity on evolutionary timescales remains obscure. The variety of responses within and between taxa, together with observations in mesocosms and palaeo-analogues, suggest that ocean acidification is a driver for substantial change in ocean ecosystems this century, potentially leading to long-term shifts in species composition.

  16. [Surgical treatment of de-novo scoliosis].

    Science.gov (United States)

    Putzier, M; Pumberger, M; Halm, H; Zahn, R K; Franke, J

    2016-09-01

    De-novo scoliosis is most commonly associated with chronic back pain and in 70 % of cases with neurological symptoms of the lower extremities. In recent literature, the occurrence and severity of segmental lateral listhesis has been discussed as being an important prognostic factor of sagittal and frontal deformity progression. In general, operative interventions in patients with de-novo scoliosis are associated with a high rate of complications. Therefore, conservative treatment modalities are recommended at early stages of the disease. If conservative management fails and a sufficient reduction of the patient's symptoms cannot be achieved, depending on the symptoms, a selective decompression, short-segment fusion or long-instrumented reduction and fusion are indicated. Additionally to the patient's symptoms, specific imaging diagnostics are necessary to develop an adequate surgical treatment strategy. Selective decompression without fusion is indicated in patients with a fixed deformity and primarily neurologic pain or deficits. In conditions of a focal pathology as cause of significant low back pain and/or neurologic symptoms at early stages of deformity, a short segment fusion is the treatment of choice. However, short-segment fusion as a less-invasive procedure must not be performed in biplanar unbalanced patients and/or advanced de-novo scoliosis. In advanced degenerative de-novo scoliosis a long-segment reposition and fusion following an alignment correction are needed. Standardized pre-operative planning and perioperative management are highly critical to the post-operative success. All operative treatment strategies in patients with de-novo scoliosis can be successful but they require sophisticated and individual surgical indication.

  17. The mitochondrial genome of Prays oleae (Insecta: Lepidoptera: Praydidae).

    Science.gov (United States)

    van Asch, Barbara; Blibech, Imen; Pereira-Castro, Isabel; Rei, Fernando Trindade; da Costa, Luís Teixeira

    2016-05-01

    Prays oleae is one of the most important olive tree pests and a species of interest in evolutionary studies, as it belongs to one of the oldest extant superfamilies of Ditrysian Lepidoptera. We determined its mitogenome sequence, and found it has common features for Lepidoptera, e.g. an >80% A + T content, an apparent CGA start codon for COX1 and an ATAGA(T)n motif in the control region, which also contains several copies of a 163-164 bp repeat. Importantly, the mitogenome displays the Met-Ile-Gln tRNA gene order typical of Ditrysia, consistent with the hypothesis that this is a synapomorphy of that clade.

  18. Distribution patterns of riodinid butterflies (Lepidoptera: Riodinidae) from southern Brazil

    OpenAIRE

    Siewert, Ricardo Russo; Iserhard,Cristiano Agra; Romanowski, Helena Piccoli; Callaghan,Curtis J.; Moser, Alfred

    2014-01-01

    Background: The aim of this study was to synthesize the knowledge of Riodinidae butterflies (Lepidoptera: Papilionoidea) in Rio Grande do Sul state (RS), southern Brazil, evaluating the role of climatic, topographic, and vegetational variables on the observed patterns of occurrence and distribution of these butterflies in the Pampa and Atlantic Forest biomes. The records of riodinid butterflies in RS were collected from published studies and the examination of museum collections in Brazil. Re...

  19. Engineered female-specific lethality for control of pest Lepidoptera.

    Science.gov (United States)

    Jin, Li; Walker, Adam S; Fu, Guoliang; Harvey-Samuel, Timothy; Dafa'alla, Tarig; Miles, Andrea; Marubbi, Thea; Granville, Deborah; Humphrey-Jones, Nerys; O'Connell, Sinead; Morrison, Neil I; Alphey, Luke

    2013-03-15

    The sterile insect technique (SIT) is a pest control strategy involving the mass release of radiation-sterilized insects, which reduce the target population through nonviable matings. In Lepidoptera, SIT could be more broadly applicable if the deleterious effects of sterilization by irradiation could be avoided. Moreover, male-only release can improve the efficacy of SIT. Adequate methods of male-only production in Lepidoptera are currently lacking, in contrast to some Diptera. We describe a synthetic genetic system that allows male-only moth production for SIT and also replaces radiation sterilization with inherited female-specific lethality. We sequenced and characterized the doublesex (dsx) gene from the pink bollworm (Pectinophora gossypiella). Sex-alternate splicing from dsx was used to develop a conditional lethal genetic sexing system in two pest moths: the diamondback moth (Plutella xylostella) and pink bollworm. This system shows promise for enhancing existing pink bollworm SIT, as well as broadening SIT-type control to diamondback moth and other Lepidoptera.

  20. [A new subspecies of Heraclides androgeus (Lepidoptera: Papilionidae) and its biogeographical aspects].

    Science.gov (United States)

    Vargas-Fernández, Isabel; Luis-Martínez, Armando; Llorente-Bousquets, Jorge

    2013-06-01

    A new subspecies of Heraclides androgeus (Lepidoptera: Papilionidae) and its biogeographical aspects. Heraclides androgeus epidaurus was described and illustrated by Godman & Salvin in 1890 based on specimens obtained in Veracruz, indicating that their distribution encompassed both the Pacific and Atlantic sides of Mexico. Later authors commented that there were morphological differences between the male wings from both populations. We analyzed, described and nominated Heraclides androgeus reyesorum ssp. nov. Vargas, Llorente & Luis distributed in the Mexican Pacific coast, based on 62 specimens, and compared it with H a. epidaurus from the Gulf of Mexico, based on more than 200 specimens housed at UNAM: Museo de Zoología, Facultad de Ciencias and the Colección Nacional de Insectos of the Instituto de Biologia, as well as some collections from the USA. The main characters were the width of the yellow and black bands on forewings in males, which had a significant difference between the populations of both sides of Mexico, although some characters were variable and showed partial overlap. In the hindwings, the differences were the extent of the subterminal lunules in dorsal and ventral view. We also analyzed the male genitalia, finding notorious differences in both sclerotic processes of the harpe. Subspecific differences between females refer to the brightness and extent of green spots on the hindwings and the extent of lunules in the ventral view. The greatest abundance of H. a. reyesorum ssp. nov. was in the tropical deciduous forest, with gallery forest and in the lower range of the cloud forest, present at altitudes of 500-800 m and 1000-1 750 m, respectively. We discussed the pattern of endemism due to historical vicariant processes and explain the presence of the new subspecies of H. androgeus and other taxa of specific level.

  1. Phylogeny of the pollinating yucca moths, with revision of Mexican species (Tegeticula and Parategeticula; Lepidoptera, Prodoxidae)

    Energy Technology Data Exchange (ETDEWEB)

    Pellmyr, Olof; Balcazar-Lara, Manuel; Segraves, Kari A.; Althoff, David M.; Littlefield, Rik J.

    2008-02-01

    ABSTRACT The yucca moths (Tegeticula and Parategeticula; Lepidoptera, Prodoxidae) are well-known for their obligate relationship as exclusive pollinators of yuccas. Revisionary work in recent years has revealed far higher species diversity than historically recognized, increasing the number of described species from four to 21. Based on field surveys in Mexico and examination of collections, we describe five additional species: T. californica Pellmyr sp. nov., T. tehuacana Pellmyr & Balcázar-Lara sp. nov., T. tambasi Pellmyr & Balcázar-Lara sp. nov., T. baja Pellmyr & Balcázar-Lara sp. nov., and P. californica Pellmyr & Balcázar-Lara sp. nov. Tegeticula treculeanella Pellmyr is identified as a junior synonym of T. mexicana Bastida. A diagnostic key to the adults of all species of the T. yuccasella complex is provided. A phylogeny based on a 2104-bp segment of mitochondrial DNA (mtDNA) in the cytochrome oxidase I and II region supported monophyly of the two pollinator genera, and strongly supported monophyly of the 17 recognized species of the T. yuccasella complex. Most relationships are well-supported, but some relationships within a recent and rapidly diversified group of 11 taxa are less robust, and in one case conflicts with a whole-genome data set (AFLP). The current mtDNA-based analyses, together with previously published AFLP data, provide a robust phylogenetic foundation for future studies of life history evolution and host interactions in one of the classical models of coevolution and obligate mutualism. ADDITIONAL KEY WORDS: mutualism, pollination, molecular phylogenetics, mitochondrial DNA

  2. Seed Germination of selected Taxa from Kachchh Desert, India

    Directory of Open Access Journals (Sweden)

    Vinay Madhukar RAOLE

    2010-06-01

    Full Text Available The district of Kachchh contains many culturally important plants. However, their conservation status is little known due to direct and indirect human activities. This study was undertaken with the aim of contributing to the conservation of the native species of these semi-arid regions through germination trials under laboratory conditions. Mature fruits of ten selected species were collected randomly from the known habitats to obtain viable seeds. These seeds were pre-treated with growth regulators singly or in combination after acid scarification or without scarification. Seeds were found to be dormant due to presence of thick seed coat or due to low level of endogenous hormonal level. Most of these seeds required different storage period to mature. Only seeds of Capparis cartilaginea germinated without treatment while the other species required treatments. Addition of growth regulators has enhanced seed germination in few taxa singly and in some plant cases in combination.

  3. Two jasmine (Oleaceae: Jasminum L. taxa newly recorded in Vietnam

    Directory of Open Access Journals (Sweden)

    Bui Hong Quang

    2017-01-01

    Full Text Available Two Jasminum taxa i.e. J. hongshuihoense and Jasminum laurifolium var. brachylobum are reported as a new record for the flora of Vietnam. J. hongshuihoense was hitherto known as endemic to China. It differs from the closely related species J. eberhardtii in having more number (4-10 of primary veins and lesser (5-8 calyx lobes. J. laurifolium var. brachylobum is closely allied to J. laurifolium var. laurifolium but it differs in having more flowers in cymes (i.e.1-8 flowers and calyx lobes (i.e. 6-10. Description and color photographs are provided for species identification. Furthermore, a comparison of the diagnostic characters with those of related species is made.

  4. Quantitative phenetics and taxonomy of some phlebotomine taxa

    Directory of Open Access Journals (Sweden)

    Dujardin JP

    1999-01-01

    Full Text Available Elucidating the evolution of Phlebotominae is important not only to revise their taxonomy, but also to help understand the origin of the genus Leishmania and its relationship with humans. Our study is a phenetic portrayal of this history based on the genetic relationships among some New Word and Old Word taxa. We used both multilocus enzyme electrophoresis and morphometry on 24 male specimens of the Old Word genus Phlebotomus (with three of its subgenera: Phlebotomus, Spelaeophlebotomus and Australophlebotomus, and on 67 male specimens of the three New World genera, Warileya, Brumptomyia and Lutzomyia, (with three subgenera of Lutzomyia: Lutzomyia, Oligodontomyia and Psychodopygus. Phenetic trees derived from both techniques were similar, but disclosed relationships that disagree with the present classification of sand flies. The need for a true evolutionary approach is stressed.

  5. Seed Germination of selected Taxa from Kachchh Desert, India

    Directory of Open Access Journals (Sweden)

    Vinay Madhukar RAOLE

    2010-06-01

    Full Text Available The district of Kachchh contains many culturally important plants. However, their conservation status is little known due to direct and indirect human activities. This study was undertaken with the aim of contributing to the conservation of the native species of these semi-arid regions through germination trials under laboratory conditions. Mature fruits of ten selected species were collected randomly from the known habitats to obtain viable seeds. These seeds were pre-treated with growth regulators singly or in combination after acid scarification or without scarification. Seeds were found to be dormant due to presence of thick seed coat or due to low level of endogenous hormonal level. Most of these seeds required different storage period to mature. Only seeds of Capparis cartilaginea germinated without treatment while the other species required treatments. Addition of growth regulators has enhanced seed germination in few taxa singly and in some plant cases in combination.

  6. Specific response to herbivore-induced de novo synthesized plant volatiles provides reliable information for host plant selection in a moth.

    Science.gov (United States)

    Zakir, Ali; Bengtsson, Marie; Sadek, Medhat M; Hansson, Bill S; Witzgall, Peter; Anderson, Peter

    2013-09-01

    Animals depend on reliable sensory information for accurate behavioural decisions. For herbivorous insects it is crucial to find host plants for feeding and reproduction, and these insects must be able to differentiate suitable from unsuitable plants. Volatiles are important cues for insect herbivores to assess host plant quality. It has previously been shown that female moths of the Egyptian cotton leafworm, Spodoptera littoralis (Lepidoptera: Noctuidae), avoid oviposition on damaged cotton Gossypium hirsutum, which may mediated by herbivore-induced plant volatiles (HIPVs). Among the HIPVs, some volatiles are released following any type of damage while others are synthesized de novo and released by the plants only in response to herbivore damage. In behavioural experiments we here show that oviposition by S. littoralis on undamaged cotton plants was reduced by adding volatiles collected from plants with ongoing herbivory. Gas chromatography-electroantennographic detection (GC-EAD) recordings revealed that antennae of mated S. littoralis females responded to 18 compounds from a collection of headspace volatiles of damaged cotton plants. Among these compounds, a blend of the seven de novo synthesized volatile compounds was found to reduce oviposition in S. littoralis on undamaged plants under both laboratory and ambient (field) conditions in Egypt. Volatile compounds that are not produced de novo by the plants did not affect oviposition. Our results show that ovipositing females respond specifically to the de novo synthesized volatiles released from plants under herbivore attack. We suggest that these volatiles provide reliable cues for ovipositing females to detect plants that could provide reduced quality food for their offspring and an increased risk of competition and predation.

  7. Fossil preservation and the stratigraphic ranges of taxa.

    Science.gov (United States)

    Foote, M; Raup, D M

    1996-01-01

    The incompleteness of the fossil record hinders the inference of evolutionary rates and patterns. Here, we derive relationships among true taxonomic durations, preservation probability, and observed taxonomic ranges. We use these relationships to estimate original distributions of taxonomic durations, preservation probability, and completeness (proportion of taxa preserved), given only the observed ranges. No data on occurrences within the ranges of taxa are required. When preservation is random and the original distribution of durations is exponential, the inference of durations, preservability, and completeness is exact. However, reasonable approximations are possible given non-exponential duration distributions and temporal and taxonomic variation in preservability. Thus, the approaches we describe have great potential in studies of taphonomy, evolutionary rates and patterns, and genealogy. Analyses of Upper Cambrian-Lower Ordovician trilobite species, Paleozoic crinoid genera, Jurassic bivalve species, and Cenozoic mammal species yield the following results: (1) The preservation probability inferred from stratigraphic ranges alone agrees with that inferred from the analysis of stratigraphic gaps when data on the latter are available. (2) Whereas median durations based on simple tabulations of observed ranges are biased by stratigraphic resolution, our estimates of median duration, extinction rate, and completeness are not biased.(3) The shorter geologic ranges of mammalian species relative to those of bivalves cannot be attributed to a difference in preservation potential. However, we cannot rule out the contribution of taxonomic practice to this difference. (4) In the groups studied, completeness (proportion of species [trilobites, bivalves, mammals] or genera [crinoids] preserved) ranges from 60% to 90%. The higher estimates of completeness at smaller geographic scales support previous suggestions that the incompleteness of the fossil record reflects loss of

  8. Identification of Erythroxylum taxa by AFLP DNA analysis.

    Science.gov (United States)

    Johnson, Emanuel L; Saunders, James A; Mischke, Sue; Helling, Charles S; Emche, Stephen D

    2003-09-01

    Erythroxylum coca, indigenous to the Andean region of South America, is grown historically as a source of homeopathic medicine. However, in the last century, cultivation of E. coca and several closely-related species for the production of illicit cocaine has become a major global problem. Two subspecies, E. coca var. coca and E. coca var. ipadu, are almost indistinguishable phenotypically; a related cocaine-bearing species also has two subspecies (E. novogranatense var. novogranatense and E. novogranatense var. truxillense) that are phenotypically similar, but morphologically distinguishable. The purpose of this research was to discover unique AFLP DNA patterns ("genetic fingerprinting") that characterize the four taxa and then, if successful, to evaluate this approach for positive identification of the various species of coca. Of seven different AFLP primer pairs tested, a combination of five proved optimal in differentiating the four taxa as well as a non-cocaine-bearing species, E. aerolatum. This method of DNA fragment separation was selective, and faster, for coca identification, compared with analyses based on flavonoid chemotaxonomy. Using the 5-primer AFLP approach, 132 known and unknown coca leaf accessions were evaluated. Of these, 38 were collected in 1997-2001 from illicit coca fields in Colombia, and all were genetically differentiated from coca originating in Peru and Bolivia. Based on the DNA profiling, we believe that the Colombian coca now represents a hybridization of E. coca var. ipadu. Geographical profiling within Colombia also seems feasible as new coca production areas are developed or new types of coca are introduced within traditional growing areas.

  9. Um novo paradigma para uma nova antropologia

    Directory of Open Access Journals (Sweden)

    Susin, Luiz Carlos

    2007-01-01

    Full Text Available Este artigo recolhe relativas à identidade humana no contexto das pesquisas científicas e das transformações ocorridas nos últimos tempos, especialmente no século XX. A nova fisica, com um novo desenho do universo, uma nova cosmologia, radicaliza, por um lado, as questões em torno do humano, e, por outro lado, abre novas possibilidades. Um novo paradigma, mais holístico, incluindo a dimensão ecológica, ou ao menos com cenários mais adequados, pode ser vislumbrado, embora ainda não descrito, por estarmos numa "era de transição". Na parte que nos toca no universo - a terra - o futuro da vida depende, em grande parte, de decisões éticas que somente o ser humano é convocado a assumir

  10. Macromolecule-Assisted de novo Protein Folding

    Science.gov (United States)

    Choi, Seong Il; Son, Ahyun; Lim, Keo-Heun; Jeong, Hotcherl; Seong, Baik L.

    2012-01-01

    In the processes of protein synthesis and folding, newly synthesized polypeptides are tightly connected to the macromolecules, such as ribosomes, lipid bilayers, or cotranslationally folded domains in multidomain proteins, representing a hallmark of de novo protein folding environments in vivo. Such linkage effects on the aggregation of endogenous polypeptides have been largely neglected, although all these macromolecules have been known to effectively and robustly solubilize their linked heterologous proteins in fusion or display technology. Thus, their roles in the aggregation of linked endogenous polypeptides need to be elucidated and incorporated into the mechanisms of de novo protein folding in vivo. In the classic hydrophobic interaction-based stabilizing mechanism underlying the molecular chaperone-assisted protein folding, it has been assumed that the macromolecules connected through a simple linkage without hydrophobic interactions and conformational changes would make no effect on the aggregation of their linked polypeptide chains. However, an increasing line of evidence indicates that the intrinsic properties of soluble macromolecules, especially their surface charges and excluded volume, could be important and universal factors for stabilizing their linked polypeptides against aggregation. Taken together, these macromolecules could act as folding helpers by keeping their linked nascent chains in a folding-competent state. The folding assistance provided by these macromolecules in the linkage context would give new insights into de novo protein folding inside the cell. PMID:22949867

  11. Revision of the West-Mediterranean geometrid genus Ekboarmia, with description of a new species from Portugal (Lepidoptera, Geometridae, Ennominae

    Directory of Open Access Journals (Sweden)

    Peder Skou

    2017-03-01

    Full Text Available The West-Mediterranean geometrid moth genus Ekboarmia Wehrli, 1943 (Lepidoptera: Geometridae, Ennominae is revised based on morphology, life history, and DNA barcodes. It was found that wing patterns allow reliable identification of species, whereas the genitalia are rather uniform in shape and less informative, and the genetic divergence (in the COI gene between species is considerably lower than in the Geometridae on average, ranging 1.5–3.9%. Four species are considered as valid: E. atlanticaria (Staudinger, 1859, with one putative subspecies in North Africa, E. fascinataria (Staudinger, 1900, E. sagnesi Dufay, 1979, and E. miniaria sp. n. from Portugal. Boarmia atlanticaria gracilis Albers & Warnecke, 1941 is downgraded to junior synonym of Boarmia (? atlanticaria atlanticaria Staudinger, 1859, syn. n. E. fascinataria is removed from the European checklist due to lack of confirmed records. Larvae, where information exists, are external feeders on Juniperus needles (Cupressaceae, and adults are nocturnal, inhabiting various habitats up to 1400 metres above sea level, having apparently at least two generations per year. Adults, male and female genitalia, distribution map, and diagnostic characters are illustrated for all species. Larva and pupa of E. atlanticaria and larva of E. sagnesi are illustrated, and results of DNA barcode analysis are presented for most taxa studied.

  12. Lepidoptera (Insecta associated with soybean in Argentina, Brazil, Chile and Uruguay

    Directory of Open Access Journals (Sweden)

    Aline Carraro Formentini

    2015-12-01

    Full Text Available ABSTRACT: The present research updates the systematic position and nomenclature of Lepidoptera associated with soybean crops in Argentina, Brazil, Chile and Uruguay. Scientific literature lists 69 species of Lepidoptera feeding on soybean plants. These species are representatives of the Superfamilies Noctuoidea (31, Pyraloidea (13, Hesperioidea (12, Tortricoidea (5, Geometroidea (5, and Bombycoidea (3. Diversity of Lepidoptera associated to crop, injury in different parts of the plant, and changes in species composition are discussed considering the changes in plant disease management, introduction of plants expressing Bt proteins, and the recent introduction of Helicoverpa armigera (Hübner as a new crop pest.

  13. PCR primers for 30 novel gene regions in the nuclear genomes of Lepidoptera

    OpenAIRE

    Wahlberg, Niklas; Peña, Carlos; Ahola, Milla; Wheat, Christopher W.; Rota, Jadranka

    2016-01-01

    Abstract We report primer pairs for 30 new gene regions in the nuclear genomes of Lepidoptera that can be amplified using a standard PCR protocol. The new primers were tested across diverse Lepidoptera , including nonditrysians and a wide selection of ditrysians. These new gene regions give a total of 11,043 bp of DNA sequence data and they show similar variability to traditionally used nuclear gene regions in studies of Lepidoptera . We feel that a PCR-based approach still has its place in m...

  14. High Andean butterflies from southern Peru, I. Dry puna Satyrinae, with the description of two new taxa and three new records from Peru (Lepidoptera: Nymphalidae

    Directory of Open Access Journals (Sweden)

    José Alfredo Cerdeña

    2014-12-01

    Full Text Available This is the first part of a series of contributions to the knowledge of the high Andean butterfly fauna in southern Peru. In this work the butterfly species of the subfamily Satyrinae present in the dry puna of Peru are reviewed. A new species, Pampasatyrus gorkyi sp. nov. and a new subspecies Argyrophorus lamna cuzcoensis ssp. nov. are described from the department Cusco, Peru. Three species are recorded for the first time for Peru, Argyrophorus gustavi Staudinger, Faunula euripides (Weymer and Faunula eleates (Weymer previously reported from Chile and Bolivia. Ecological and biogeographical data are provided.

  15. Comparative study of Passiflora taxa leaves: II. A chromatographic profile

    Directory of Open Access Journals (Sweden)

    Luma Wosch

    Full Text Available ABSTRACT Popularly known as passion fruit, some species of the genus Passiflora are widely used in folk medicines, such as sedatives and tranquilizers in many countries. Although these plants are employed for the same purposes, research with different species of Passiflora has indicated their heterogeneous chemical compositions. Since different chemical compositions can result in varying degrees of therapeutic efficiency, quality control based on the chemical constituents of each species is essential. To that end, the aim of this study was to compare pharmacognostically species of Passiflora in order to establish a chromatographic profile for the quality control of drugs in herbal medicines containing passion fruit. The study was conducted by collecting samples of leaves from twelve Passiflora taxa (i.e., ten species and two forms of P. edulis – P. actinia, P. alata, P. amethystina, P. capsularis, P. cincinnata, P. edulis f. flavicarpa, P. edulis f. edulis, P. incarnata, P. morifolia, P. urnifolia, P. coccinea, and P. setacea – from different locations and obtaining their chromatographic profiles via thin-layer chromatography and high-performance liquid chromatography. Both methods used the flavonoid C-glycosides isoorientin, orientin, vitexin, and isovitexin as reference compounds and could ultimately establish specific profiles for each species. The chromatographic analyses discussed here can be used to assist in determining the quality and authenticity of herbal drugs derived from Passiflora species.

  16. DNA barcoding and taxonomy: dark taxa and dark texts.

    Science.gov (United States)

    Page, Roderic D M

    2016-09-05

    Both classical taxonomy and DNA barcoding are engaged in the task of digitizing the living world. Much of the taxonomic literature remains undigitized. The rise of open access publishing this century and the freeing of older literature from the shackles of copyright have greatly increased the online availability of taxonomic descriptions, but much of the literature of the mid- to late-twentieth century remains offline ('dark texts'). DNA barcoding is generating a wealth of computable data that in many ways are much easier to work with than classical taxonomic descriptions, but many of the sequences are not identified to species level. These 'dark taxa' hamper the classical method of integrating biodiversity data, using shared taxonomic names. Voucher specimens are a potential common currency of both the taxonomic literature and sequence databases, and could be used to help link names, literature and sequences. An obstacle to this approach is the lack of stable, resolvable specimen identifiers. The paper concludes with an appeal for a global 'digital dashboard' to assess the extent to which biodiversity data are available online.This article is part of the themed issue 'From DNA barcodes to biomes'.

  17. Novos táxons em Hippopsini, Desmiphorini, Xenofreini e Acanthoderini (Coleoptera, Cerambycidae, Lamiinae

    Directory of Open Access Journals (Sweden)

    Maria Helena M. Galileo

    2006-01-01

    Full Text Available Descrição de novos táxons em Hippopsini, Desmiphorini, Xenofreini e Acanthoderini (Coleoptera, Cerambycidae, Lamiinae. Espécies novas descritas da Bolívia: Trichohippopsis exilis sp. nov., Megacera acuminata sp. nov., Acanthoderes onca sp. nov., Psapharochrus pinima sp. nov., Ateralphus lacteus sp. nov., Nesozineus simile sp. nov. e do México (Chiapas, Guerrero X. guttata sp. nov. O nome novo Monnetyra é proposto para Anhanga Galileo & Martins, 2003 non Anhanga Distant, 1887 (Hemiptera. Nova combinação: Monnetyra diabolica (Galileo & Martins, 2003. Registra-se para a Bolívia Xenofrea pseudomurina Tavakilian & Néouze, 2006.New taxa of Hippopsini, Desmiphorini, Xenofreini and Acanthoderini (Coleoptera, Cerambycidae, Lamiinae. The following species are described, from Bolivia: Trichohippopsis exilis sp. nov., Megacera acuminata sp. nov., Acanthoderes onca sp. nov., Psapharochrus pinima sp. nov., Ateralphus lacteus sp. nov., and Nesozineus simile sp. nov.; and from Mexico (Chiapas, Guerrero Xenofrea gutata sp. nov. The new name Monnetyra is proposed for Anhanga Galileo & Martins, 2003 non Anhanga Distant, 1887 (Hemiptera and new combination: Monnetyra diabolica (Galileo & Martins, 2003. Xenofrea pseudomurina Tavakilian & Néouze is recorded for Bolivia.

  18. Notas e descrições de novos táxons em Cerambycinae Neotropicais (Coleoptera, Cerambycidae

    Directory of Open Access Journals (Sweden)

    Dilma Solange Napp

    2006-01-01

    Full Text Available Notas e descrições de novos táxons em Cerambycinae Neotropicais (Coleoptera, Cerambycidae. Novos táxons descritos em Ectenessini: Ectenessidia metallica sp. nov. (Brasil: Distrito Federal; em Compsocerini: Upindauara gen. nov., espécie-tipo U. bella sp. nov., (Brasil: Rondônia e Goatacara gen. nov., espécie-tipo G. boliviana sp. nov. (Bolívia: Santa Cruz; em Heteropsini: Amoaba gen. nov, espécie-tipo, A. plumosa sp. nov. do Equador (Pichincha e Chrysoprasis rubricollis sp. nov. do Panamá (Panamá. Em Rhopalophorini, Cycnoderus (C. expeditus Chevrolat, 1859 é redescrita e assinalada para o Equador (Loja, Cycnoderus (C. intinctus (Pascoe, 1866 comb. nov. é revalidada e Gurubira apicalis (Fuchs, 1966 comb. nov., redescrita e ilustrada.Notes and descriptions of new taxa of Neotropical Cerambycinae (Coleoptera, Cerambycidae. New taxa described: in Ectenessini: Ectenessidia metallica sp. nov. from Brazil (Distrito Federal; in Compsocerini: Upindauara gen. nov., type species U. bella sp. nov. from Brazil (Rondônia and Goatacara gen. nov., type species, G. boliviana sp. nov. from Bolivia (Santa Cruz; in Heteropsini: Amoaba gen. nov., type species A. plumosa sp. nov. from Ecuador (Pichincha; Chrysoprasis rubricollis sp. nov. from Panama (Panama; in Rhopalophorini, Cycnoderus (C. expeditus Chevrolat, 1859 is redescribed and recorded from Ecuador (Loja, Cycnoderus (C. intinctus (Pascoe, 1866 comb. nov. is reinstated and Gurubira apicalis (Fuchs, 1966, comb. nov. is redescribed and illustrated.

  19. Complete mitochondrial genomes of five skippers (Lepidoptera: Hesperiidae) and phylogenetic reconstruction of Lepidoptera.

    Science.gov (United States)

    Kim, Min Jee; Wang, Ah Rha; Park, Jeong Sun; Kim, Iksoo

    2014-10-01

    We sequenced mitogenomes of five skippers (family Hesperiidae, Lepidoptera) to obtain further insight into the characteristics of butterfly mitogenomes and performed phylogenetic reconstruction using all available gene sequences (PCGs, rRNAs, and tRNAs) from 85 species (20 families in eight superfamilies). The general genomic features found in the butterflies also were found in the five skippers: a high A+T composition (79.3%-80.9%), dominant usage of TAA stop codon, similar skewness pattern in both strands, consistently length intergenic spacer sequence between tRNA(Gln) and ND2 (64-87 bp), conserved ATACTAA motif between tRNA(Ser (UCN)) and ND1, and characteristic features of the A+T-rich region (the ATAGA motif, varying length of poly-T stretch, and poly-A stretch). The start codon for COI was CGA in four skippers as typical, but Lobocla bifasciatus evidently possessed canonical ATG as start codon. All species had the ancestral arrangement tRNA(Asn)/tRNA(Ser (AGN)), instead of the rearrangement tRNA(Ser (AGN))/tRNA(Asn), found in another skipper species (Erynnis). Phylogenetic analyses using all available genes (PCGs, rRNAS, and tRNAs) yielded the consensus superfamilial relationships ((((((Bombycoidea+Noctuoidea+Geometroidea)+Pyraloidea)+Papilionoidea)+Tortricoidea)+Yponomeutoidea)+Hepialoidea), confirming the validity of Macroheterocera (Bombycoidea, Noctuoidea, and Geometroidea in this study) and its sister relationship to Pyraloidea. Within Rhopalocera (butterflies and skippers) the familial relationships (Papilionidae+(Hesperiidae+(Pieridae+((Lycaenidae+Riodinidae)+Nymphalidae)))) were strongly supported in all analyses (0.98-1 by BI and 96-100 by ML methods), rendering invalid the superfamily status for Hesperioidea. On the other hand, current mitogenome-based phylogeny did not find consistent superfamilial relationships among Noctuoidea, Geometroidea, and Bombycoidea and the familial relationships within Bombycoidea between analyses, requiring further

  20. Macrocentrus sylvestrellae spec. nov. (Hymenoptera: Braconidae: Macrocentrinae), a parasitoid of Dioryctria sylvestrella (Ratzeburg) (Lepidoptera: Pyralidae)

    NARCIS (Netherlands)

    Achterberg, van C.

    2001-01-01

    A new species of the genus Macrocentrus Curtis, 1833 (Hymenoptera: Braconidae: Macrocentrinae) described and illustrated: M. sylvestrellae spec. nov. from France and Italy. It is a gregarious koinobiont endoparasitoid of the pine stem borer Dioryctria sylvestrella (Ratzeburg, 1840) (Lepidoptera; Pyr

  1. POPULATION SYNCHRONY WITHIN AND AMONG LEPIDOPTERA SPECIES IN RELATION TO WEATHER, PHYLOGENY, AND LARVEL PHENOLOGY

    Science.gov (United States)

    1. The population dynamics of native herbivore species in central Appalachian deciduous forests were studied by analysing patterns of synchrony among intra- and interspecific populations and weather. 2. Spatial synchrony of 10 Lepidoptera species and three weather variables (min...

  2. De valkruidmineervlinder Digitivalva arnicella in Nederland: herontdekking en behoud (Lepidoptera: Plutellidae: Acrolepiinae)

    NARCIS (Netherlands)

    Nieukerken, van E.J.; Koster, J.C.

    1999-01-01

    The occurrence of Digitivalva arnicella in the Netherlands: rediscovery and conservation (Lepidoptera: Plutellidae: Acrolepiinae) Digitivalva arnicella (Heyden, 1863), previously only known from two localities before 1902, has been rediscovered in eight localities in the northern part of the Netherl

  3. Fund af småsommerfugle fra Danmark i 2012 (Lepidoptera)

    DEFF Research Database (Denmark)

    Buhl, Otto; Falck, Per; Karsholt, Ole

    2013-01-01

    traps in Born holm. We more over trans fer Caloptilia azaleella (Brants, 1913) (Gra cil lariidae) from the ob ser va tion list to the main list of Dan ish Lepidoptera. The to tal num ber of Dan ish Gracillariidae is now 88, Gelechiidae 178 and of Tortricidae 389. This re sults in a to tal of 1587 spe...... cies of Microlepidoptera found in Den mark. The to tal amount of Macro - lepidoptera re corded from Den mark is now 969, bring ing the num ber of Dan ish Lepidoptera to a to tal of 2556 species. With the new Dan ish check list the so-called ob ser va tion list has been ex tended to in clude both spe...... cies of un cer tain faunistic sta tus in Den - mark and spe cies of un cer tain tax o nomic sta tus. There are 13 spe cies of Lepidoptera on the for mer and 11 spe cies on the latter....

  4. Two species of Gelechioidea (Lepidoptera) from Southeast Asia associated with downy rose myrtle, Rhodomyrtus tomentosa (Myrtaceae)

    Science.gov (United States)

    Two species of Gelechioidea (Lepidoptera), Metharmostis multilineata Adamski, n. sp. (Cosmopterigidae), and Idiophantis soreuta Meyrick, 1906 (Gelechiidae), were collected in southeastern Asia for evaluation as potential biocontrol agents against downy rose myrtle, Rhodomyrtus tomentosa (Aiton) Hass...

  5. POPULATION SYNCHRONY WITHIN AND AMONG LEPIDOPTERA SPECIES IN RELATION TO WEATHER, PHYLOGENY, AND LARVEL PHENOLOGY

    Science.gov (United States)

    1. The population dynamics of native herbivore species in central Appalachian deciduous forests were studied by analysing patterns of synchrony among intra- and interspecific populations and weather. 2. Spatial synchrony of 10 Lepidoptera species and three weather variables (min...

  6. A new species of the genus Arcoptilia Arenberger (Lepidoptera, Pterophoridae) from Angola.

    Science.gov (United States)

    Ustjuzhanin, P; Kovtunovich, V

    2015-08-21

    The new species Arcoptilia naumanni sp. nov. (Lepidoptera, Pterophoridae) is described and illustrated from males found in Angola. Platyptilia rufamaculata Gielis, 2011, syn. nov. is established as a junior synonym of Arcoptilia pongola Ustjuzhanin & Kovtunovich, 2010.

  7. De novo psychogenic seizures after epilepsy surgery: case report

    Directory of Open Access Journals (Sweden)

    MONTENEGRO MARIA AUGUSTA

    2000-01-01

    Full Text Available The occurrence of de novo psychogenic seizures after epilepsy surgery is rare, and is estimated in 1.8% to 3.6%. Seizures after epilepsy surgery should be carefully evaluated, and de novo psychogenic seizures should be considered especially when there is a change in the ictal semiology. We report a patient with de novo psychogenic seizures after anterior temporal lobe removal for refractory temporal lobe epilepsy. Once psychogenic seizures were diagnosed and psychiatric treatment was started, seizures stopped.

  8. Alternative techniques to study characters of the genitalia in Lepidoptera.

    Science.gov (United States)

    Dias, Fernando M S; Casagrande, Mirna M; Mielke, Olaf H H

    2010-01-01

    The present note aims to describe two alternative methods for observing genitalia in Lepidoptera. The first one provides means to examine both male and female genitalia without spoiling the scales of the abdomen, preserving it attached to the thorax and aesthetically similar to an unexamined specimen. The second one provides ways of observing certain characters on the male genitalia in a non-destructive way, and does not depend on time-consuming removing and dissection of the abdomen. It is expected that the presented techniques will help on morphological studies and on identifying similar species which consistently differ in genitalic armatures.

  9. Novos paradigmas literários

    Directory of Open Access Journals (Sweden)

    Denise Azevedo Duarte Guimarães

    2005-12-01

    Full Text Available O artigo estuda a emergência de novos paradigmas literários, procurando refletir acerca das textualidades contemporâneas. Focaliza os hipertextos informatizados e a poesia multimídia, com o intuito de desvendar como estão sendo criados novos procedimentos expressivos e em que medida eles podem ser identificados com reflexões teóricas anteriores acerca do texto literário impresso. Remete a questões ligadas à leitura dos diferentes tipos de signos e aos modos como eles se integram para a constituição dessas novíssimas linguagens híbridas em novos suportes.El artículo estudia la emergencia de nuevos paradigmas literarios, procurando reflejar acerca de las textualidades contemporáneas. Enfoca los hipertextos informatizados y la poesía multimedia, intentando desvendar cómo están siendo creados nuevos procedimientos expresivos y en qué medida ellos pueden ser identificados a reflexiones teóricas anteriores acerca del texto literario impreso. Remite a cuestiones ligadas a la lectura de los diferentes tipos de signos y a los modos cómo ellos se interaccionan para la constitución de los novísimos lenguajes híbridos en nuevos supuestos.This article investigates the emergence of new literary paradigms as it tries to understand new contemporary textualities. It analyses some hypertexts and multimedia poetry trying to trace how new expressive procedures are being created. How can these new languages be identified and what are their relations to previous theories which dealt with the literary printed text? This study approaches questions linked to the reading of different types of signs and the modes they function towards the fabrication of these new hybrid languages.

  10. Sustaining salmonid populations: A caring understanding of naturalness of taxa

    Science.gov (United States)

    Nielsen, J.L.; Regier, H.A.

    2004-01-01

    Species of the family of Salmonidae occur naturally in Northern Hemisphere waters that remain clear and cool to cold in summer. For purposes of reproduction, salmonids generally behaviorally respond to the currents of streams and lakes in recently glaciated areas. For feeding and maturation, many larger species migrate into existing systems of large lakes, seas, and oceans. The subfamilies include Salmoninae, Coregoninae, and Thymallinae. In many locales and regions of the hemisphere, numerous species of these subfamilies evolved and self-organized into species flocks or taxocenes of bewildering complexity. For example, any individual species may play different or unique ecological roles in different taxocenes. The northern Pacific and Atlantic Ocean ecosystems, with their seas and tributaries, each contained a metacomplex of such taxocenes that, in their natural state some centuries ago, resembled each other but differed in many ways. Humans have valued all species of this family for subsistence, ceremonial, naturalist, gustatory, angling, and commercial reasons for centuries. Modern progressive humans (MPHs), whose industrial and commercial enterprises have gradually spread over this hemisphere in recent time, now affect aquatic ecosystems at all scales from local to global. These human effects mingle in complex ways that together induce uniquely natural salmonid taxocenes to disintegrate with the loss of species, including those groups least tolerant to human manipulations, but extending more recently to those taxa more adapted to anthropogenic change. As we leave the modern era, dominated by MPHs, will we find ways to live sustainably with salmonid taxocenes that still exhibit self-organizational integrity, or will only individual, isolated populations of salmonid species, derived from those most tolerant of MPHs, survive? To achieve future sustainability of salmonids, we suggest implementation of a search for intuitive knowledge based on faith in the wisdom of

  11. Novos conhecimentos sobre a flora bacteriana vaginal

    OpenAIRE

    Iara Moreno Linhares; Paulo Cesar Giraldo; Edmund Chada Baracat

    2010-01-01

    O objetivo desta revisão foi apresentar os novos conhecimentos sobre o ecossistema vaginal, enfatizando os métodos não cultiváveis de identificação microbiana (amplificação de genes), as várias espécies de Lactobacillus que podem compor a flora vaginal e a interação desta com os mecanismos locais de imunidade inata e adquirida, dependentes dos constituintes genéticos. Foram pesquisados no Medline (Pubmed) os artigos relacionados ao tema publicados entre 1997 e 2009, selecionando-se apenas os ...

  12. Novos sedativos hipnóticos

    OpenAIRE

    Sukys-Claudino, Lucia [UNIFESP; Moraes, Walter André dos Santos; Tufik, Sergio; Poyares, Dalva

    2010-01-01

    Nas últimas décadas houve um esforço para o desenvolvimento de hipnóticos mais seguros e eficazes. Zolpidem, zaleplona, zopiclona, eszopiclona (drogas-z) e indiplona são moduladores do receptor GABA-A, os quais agem de forma seletiva na subunidade α1, exibindo, desta forma, mecanismos similares de ação, embora evidências recentes sugiram que a eszopiclona não seja tão seletiva para a subunidade α1 quanto o zolpidem. Ramelteon e tasimelteon são novos agentes crono-hipnóticos seletivo...

  13. O novo paradigma da violência

    OpenAIRE

    Wieviorka, Michel

    1997-01-01

    O autor procura redimensionar o conceito de violência dentro do atual estado de globalização mundial. Crise internacional, narcotráfico, derrocada do bloco socialista no leste europeu, políticas assistenciais de organismos internacionais, conceitos de desenvolvimento e de subdesenvolvimento, terrorismo, sectarismo político e religioso, novas conceituações culturais e sociais são temas trabalhados pelo autor com vistas ao estabelecimento de um novo paradigma da violência.

  14. De novo autoimmune hepatitis after liver transplantation.

    Science.gov (United States)

    Lohse, Ansgar W; Weiler-Norman, Christina; Burdelski, Martin

    2007-10-01

    The Kings College group was the first to describe a clinical syndrome similar to autoimmune hepatitis in children and young adults transplanted for non-immune mediated liver diseases. They coined the term "de novo autoimmune hepatitis". Several other liver transplant centres confirmed this observation. Even though the condition is uncommon, patients with de novo AIH are now seen in most of the major transplant centres. The disease is usually characterized by features of acute hepatitis in otherwise stable transplant recipients. The most characteristic laboratory hallmark is a marked hypergammaglobulinaemia. Autoantibodies are common, mostly ANA. We described also a case of LKM1-positivity in a patients transplanted for Wilson's disease, however this patients did not develop clinical or histological features of AIH. Development of SLA/LP-autoantibodies is also not described. Therefore, serologically de novo AIH appears to correspond to type 1 AIH. Like classical AIH patients respond promptly to treatment with increased doses of prednisolone and azathioprine, while the calcineurin inhibitors cyclosporine or tacrolimus areof very limited value - which is not surprising, as almost all patients develop de novo AIH while receiving these drugs. Despite the good response to treatment, most patients remain a clinical challenge as complete stable remissions are uncommon and flares, relapses and chronic disease activity can often occur. Pathogenetically this syndrome is intriguing. It is not clear, if the immune response is directed against allo-antigens, neo-antigens in the liver, or self-antigens, possibly shared by donor and host cells. It is very likely that the inflammatory milieu due to alloreactive cells in the transplanted organ contribute to the disease process. Either leading to aberrant antigen presentation, or providing co-stimulatory signals leading to the breaking of self-tolerance. The development of this disease in the presence of treatment with calcineurin

  15. Um desenho institucional para o novo associativismo

    OpenAIRE

    Avritzer,Leonardo

    1997-01-01

    Apontam-se elementos de alteração no padrão do associativismo latino-americano e na auto-percepção dos participantes das associações civis. A partir dessa análise, sugere-se um modelo institucional que permitiria potencializar a contribuição desse novo associativismo para a democratização de práticas políticas que se geraram à sombra da debilidade histórica do associativismo civil.

  16. Materiały do znajomości Gelechiidae (Lepidoptera) Wielkopolskiego Parku Narodowego

    DEFF Research Database (Denmark)

    Baraniak, Edward; Walczak, Urszula; Karsholt, Ole

    2014-01-01

    A faunistic list of 48 species of gelechiid moths (Lepidoptera: Gele-chiidae) collected in the Wielkopolski National Park is given. Syncopacma larseniella GOZMANY, 1957 is new to the fauna of Poland.......A faunistic list of 48 species of gelechiid moths (Lepidoptera: Gele-chiidae) collected in the Wielkopolski National Park is given. Syncopacma larseniella GOZMANY, 1957 is new to the fauna of Poland....

  17. Population dynamic of the swallowtail butterfly, Papilio polytes (Lepidoptera: Papilionidae) in dry and wet seasons

    OpenAIRE

    SUWARNO

    2010-01-01

    Suwarno (2010) Population dynamic of the swallowtail butterfly, Papilio polytes (Lepidoptera: Papilionidae) in dry and wet seasons. Biodiversitas 11: 19-23. The population dynamic of Papilio polytes L. (Lepidoptera: Papilionidae) in dry and wet seasons was investigated in the citrus orchard in Tasek Gelugor, Pulau Pinang, Malaysia. Population of immature stages of P. polytes was observed alternate day from January to March 2006 (dry season, DS), from April to July 2006 (secondary wet season, ...

  18. Evolution and function of de novo originated genes.

    Science.gov (United States)

    Wu, Dong-Dong; Zhang, Ya-Ping

    2013-05-01

    De novo origination has recently been appreciated to be an important mechanism contributing to the origin of genes. Evidence indicates that de novo originated genes can evolve important and even essential functions rapidly. We present an "adaptation following neutrality" process to explain the evolution of essential function of new genes. How new de novo originated genes become involved in pathways and interact with other old genes, and the exact functions of these new genes, however, remains largely undocumented. Examinations of the function of de novo origin and the function of noncoding RNA genes should become more frequent and appreciated in the future studies.

  19. Deleterious activity of natural products on postures of Spodoptera frugiperda (Lepidoptera: Noctuidae) and Diatraea saccharalis (Lepidoptera: Pyralidae).

    Science.gov (United States)

    Tavares, Wagner S; Cruz, Ivan; Fonseca, Felipe G; Gouveia, Natalia L; Serrão, José E; Zanuncio, José C

    2010-01-01

    The control of Lepidoptera pests should be carried out before hatching of their caterpillars to avoid damage to the crops. The aim of this work was to assess the activity of neem (trade name: Natuneem, producer: Base Fértil, Chapadão do Sul, Brazil) and pyroligneous extracts (trade name: Biopirol 7M, producer: Biocarbo, Itabirito, Brazil) at 10 mL/L (1%) and 20 mL/L (2%) contents on egg masses of different ages of Spodoptera frugiperda Smith (Lepidoptera: Noctuidae) and of Diatraea saccharalis F. (Lepidoptera: Pyralidae) at Embrapa Corn and Sorghum in Sete Lagoas, Minas Gerais State, Brazil. The tests took place in an unbiased casualized design with 12 treatments and four replications. The insecticides were diluted in water, and 0.04 mL of the solution was applied to recently laid and one- and two-day-old eggs of S. frugiperda and D. saccharalis. Caterpillars hatching from recently laid egg masses of S. frugiperda was lower with 2% pyroligneous extract [(0.02 +/- 0.00)%]. Recently laid eggs and one- or two-day-old eggs of D. saccharalis presented lower caterpillar hatching with 1% neem extract [(0.00 +/- 0.00)%, (0.00 +/- 0.00)%, and (1.00 +/- 0.01)%] and 2% neem extract [(0.00 +/- 0.00)%], compared to 1% pyroligneous extract [(27.30 +/- 3.22)%, (28.40 +/- 3.32)%, and (37.80 +/- 4.14)%] and 2% pyroligneous extract [(42.20 +/- 4.49)%, (48.70 +/- 4.97)%, and (56.60 +/- 5.52)%], respectively. Neem and pyroligneous extracts had impact on hatching of S. frugiperda and D. saccharalis caterpillars.

  20. Extinction cascades partially estimate herbivore losses in a complete Lepidoptera--plant food web.

    Science.gov (United States)

    Pearse, Ian S; Altermatt, Florian

    2013-08-01

    The loss of species from an ecological community can have cascading effects leading to the extinction of other species. Specialist herbivores are highly diverse and may be particularly susceptible to extinction due to host plant loss. We used a bipartite food web of 900 Lepidoptera (butterfly and moth) herbivores and 2403 plant species from Central Europe to simulate the cascading effect of plant extinctions on Lepidoptera extinctions. Realistic extinction sequences of plants, incorporating red-list status, range size, and native status, altered subsequent Lepidoptera extinctions. We compared simulated Lepidoptera extinctions to the number of actual regional Lepidoptera extinctions and found that all predicted scenarios underestimated total observed extinctions but accurately predicted observed extinctions attributed to host loss (n = 8, 14%). Likely, many regional Lepidoptera extinctions occurred for reasons other than loss of host plant alone, such as climate change and habitat loss. Ecological networks can be useful in assessing a component of extinction risk to herbivores based on host loss, but further factors may be equally important.

  1. The Lepidoptera associated with forestry crop species in Brazil: a historical approach.

    Science.gov (United States)

    Kowalczuck, Manoela; Carneiro, E; Casagrande, M M; Mielke, O H H

    2012-10-01

    Despite the long history of forestry activity in Brazil and its importance to the national economy, there is still much disorder in the information regarding pests of forestry species. Considering the importance of the entomological knowledge for the viability of silvicultural management, this work aimed to gather information on the species of Lepidoptera associated with forestry crops within Brazil using a historical approach. Through a literature review, all registered species of Lepidoptera related to forestry crops in Brazil from 1896 to 2010 were identified. The historical evaluation was based on the comparison of the number of published articles, species richness, and community similarities of the Lepidoptera and their associated forest crops, grouped in 10-year samples. A total of 417 occurrences of Lepidoptera associated with forestry species were recorded, from which 84 species are related with 40 different forestry crops. The nocturnal Lepidoptera were dominant on the records, with Eacles imperialis magnifica Walker as the most frequent pest species cited. Myrtaceae was the most frequent plant family, with Cedrela fissilis as the most cited forestry crop species. A successional change in both Lepidoptera species and their host plants was observed over the decades. The richness of lepidopteran pest species increased over the years, unlike the richness of forestry crop species. This increase could be related to the inefficient enforcement of sanitary barriers, to the increase of monoculture areas, and to the adaptability of native pests to exotic forestry species used in monoculture stands.

  2. A molecular phylogeny for yponomeutoidea (insecta, Lepidoptera, ditrysia and its implications for classification, biogeography and the evolution of host plant use.

    Directory of Open Access Journals (Sweden)

    Jae-Cheon Sohn

    Full Text Available BACKGROUND: Yponomeutoidea, one of the early-diverging lineages of ditrysian Lepidoptera, comprise about 1,800 species worldwide, including notable pests and insect-plant interaction models. Yponomeutoids were one of the earliest lepidopteran clades to evolve external feeding and to extensively colonize herbaceous angiosperms. Despite the group's economic importance, and its value for tracing early lepidopteran evolution, the biodiversity and phylogeny of Yponomeutoidea have been relatively little studied. METHODOLOGY/PRINCIPAL FINDINGS: Eight nuclear genes (8 kb were initially sequenced for 86 putative yponomeutoid species, spanning all previously recognized suprageneric groups, and 53 outgroups representing 22 families and 12 superfamilies. Eleven to 19 additional genes, yielding a total of 14.8 to 18.9 kb, were then sampled for a subset of taxa, including 28 yponomeutoids and 43 outgroups. Maximum likelihood analyses were conducted on data sets differing in numbers of genes, matrix completeness, inclusion/weighting of synonymous substitutions, and inclusion/exclusion of "rogue" taxa. Monophyly for Yponomeutoidea was supported very strongly when the 18 "rogue" taxa were excluded, and moderately otherwise. Results from different analyses are highly congruent and relationships within Yponomeutoidea are well supported overall. There is strong support overall for monophyly of families previously recognized on morphological grounds, including Yponomeutidae, Ypsolophidae, Plutellidae, Glyphipterigidae, Argyresthiidae, Attevidae, Praydidae, Heliodinidae, and Bedelliidae. We also assign family rank to Scythropiinae (Scythropiidae stat. rev., which in our trees are strongly grouped with Bedelliidae, in contrast to all previous proposals. We present a working hypothesis of among-family relationships, and an informal higher classification. Host plant family associations of yponomeutoid subfamilies and families are non-random, but show no trends

  3. DNA barcode data accurately assign higher spider taxa

    Directory of Open Access Journals (Sweden)

    Jonathan A. Coddington

    2016-07-01

    Full Text Available The use of unique DNA sequences as a method for taxonomic identification is no longer fundamentally controversial, even though debate continues on the best markers, methods, and technology to use. Although both existing databanks such as GenBank and BOLD, as well as reference taxonomies, are imperfect, in best case scenarios “barcodes” (whether single or multiple, organelle or nuclear, loci clearly are an increasingly fast and inexpensive method of identification, especially as compared to manual identification of unknowns by increasingly rare expert taxonomists. Because most species on Earth are undescribed, a complete reference database at the species level is impractical in the near term. The question therefore arises whether unidentified species can, using DNA barcodes, be accurately assigned to more inclusive groups such as genera and families—taxonomic ranks of putatively monophyletic groups for which the global inventory is more complete and stable. We used a carefully chosen test library of CO1 sequences from 49 families, 313 genera, and 816 species of spiders to assess the accuracy of genus and family-level assignment. We used BLAST queries of each sequence against the entire library and got the top ten hits. The percent sequence identity was reported from these hits (PIdent, range 75–100%. Accurate assignment of higher taxa (PIdent above which errors totaled less than 5% occurred for genera at PIdent values >95 and families at PIdent values ≥ 91, suggesting these as heuristic thresholds for accurate generic and familial identifications in spiders. Accuracy of identification increases with numbers of species/genus and genera/family in the library; above five genera per family and fifteen species per genus all higher taxon assignments were correct. We propose that using percent sequence identity between conventional barcode sequences may be a feasible and reasonably accurate method to identify animals to family/genus. However

  4. Inducible De Novo Biosynthesis of Isoflavonoids in Soybean Leaves by Spodoptera litura Derived Elicitors: Tracer Techniques Aided by High Resolution LCMS.

    Science.gov (United States)

    Nakata, Ryu; Kimura, Yuki; Aoki, Kenta; Yoshinaga, Naoko; Teraishi, Masayoshi; Okumoto, Yutaka; Huffaker, Alisa; Schmelz, Eric A; Mori, Naoki

    2016-12-01

    Isoflavonoids are a characteristic family of natural products in legumes known to mediate a range of plant-biotic interactions. For example, in soybean (Glycine max: Fabaceae) multiple isoflavones are induced and accumulate in leaves following attack by Spodoptera litura (Lepidoptera: Noctuidae) larvae. To quantitatively examine patterns of activated de novo biosynthesis, soybean (Var. Enrei) leaves were treated with a combination of plant defense elicitors present in S. litura gut content extracts and L-α-[(13)C9, (15)N]phenylalanine as a traceable isoflavonoid precursor. Combined treatments promoted significant increases in (13)C-labeled isoflavone aglycones (daidzein, formononetin, and genistein), (13)C-labeled isoflavone 7-O-glucosides (daidzin, ononin, and genistin), and (13)C-labeled isoflavone 7-O-(6″-O-malonyl-β-glucosides) (malonyldaidzin, malonylononin, and malonylgenistin). In contrast levels of (13)C-labeled flavones and flavonol (4',7-dihydroxyflavone, kaempferol, and apigenin) were not significantly altered. Curiously, application of fatty acid-amino acid conjugate (FAC) elicitors present in S. litura gut contents, namely N-linolenoyl-L-glutamine and N-linoleoyl-L-glutamine, both promoted the induced accumulation of isoflavone 7-O-glucosides and isoflavone 7-O-(6″-O-malonyl-β-glucosides), but not isoflavone aglycones in the leaves. These results demonstrate that at least two separate reactions are involved in elicitor-induced soybean leaf responses to the S. litura gut contents: one is the de novo biosynthesis of isoflavone conjugates induced by FACs, and the other is the hydrolysis of the isoflavone conjugates to yield isoflavone aglycones. Gut content extracts alone displayed no hydrolytic activity. The quantitative analysis of isoflavone de novo biosynthesis, with respect to both aglycones and conjugates, affords a useful bioassay system for the discovery of additional plant defense elicitor(s) in S. litura gut contents that specifically

  5. De novo computer-aided design of novel antiviral agents.

    Science.gov (United States)

    Massarotti, Alberto; Coluccia, Antonio; Sorba, Giovanni; Silvestri, Romano; Brancale, Andrea

    2012-01-01

    Computer-aided drug design techniques have become an integral part of the drug discovery process. In particular, de novo methodologies can be useful to identify putative ligands for a specific target relying only on the structural information of the target itself. Here we discuss the basic de novo approaches available and their application in antiviral drug design.:

  6. EXCLUSION OF RARE TAXA AFFECTS PERFORMANCE OF THE O/E INDEX IN BIOASSESSMENTS

    Science.gov (United States)

    The contribution of rare taxa to bioassessments based on multispecies assemblages is the subject of continued debate. As a result, users of predictive models such as River InVertebrate Prediction and Classification System (RIVPACS) disagree on whether to exclude locally rare taxa...

  7. Divergence time estimation using fossils as terminal taxa and the origins of Lissamphibia.

    Science.gov (United States)

    Pyron, R Alexander

    2011-07-01

    Were molecular data available for extinct taxa, questions regarding the origins of many groups could be settled in short order. As this is not the case, various strategies have been proposed to combine paleontological and neontological data sets. The use of fossil dates as node age calibrations for divergence time estimation from molecular phylogenies is commonplace. In addition, simulations suggest that the addition of morphological data from extinct taxa may improve phylogenetic estimation when combined with molecular data for extant species, and some studies have merged morphological and molecular data to estimate combined evidence phylogenies containing both extinct and extant taxa. However, few, if any, studies have attempted to estimate divergence times using phylogenies containing both fossil and living taxa sampled for both molecular and morphological data. Here, I infer both the phylogeny and the time of origin for Lissamphibia and a number of stem tetrapods using Bayesian methods based on a data set containing morphological data for extinct taxa, molecular data for extant taxa, and molecular and morphological data for a subset of extant taxa. The results suggest that Lissamphibia is monophyletic, nested within Lepospondyli, and originated in the late Carboniferous at the earliest. This research illustrates potential pitfalls for the use of fossils as post hoc age constraints on internal nodes and highlights the importance of explicit phylogenetic analysis of extinct taxa. These results suggest that the application of fossils as minima or maxima on molecular phylogenies should be supplemented or supplanted by combined evidence analyses whenever possible.

  8. State-of-Science Approaches to Determine Sensitive Taxa for Water Quality Criteria Derivation

    Science.gov (United States)

    Current Ambient Water Quality Criteria (AWQC) guidelines specify pre-defined taxa diversity requirements, which has limited chemical-specific criteria development in the U.S. to less than 100 chemicals. A priori knowledge of sensitive taxa to toxicologically similar groups of che...

  9. Studies on Barbula flavicans D.G. Long and related taxa

    OpenAIRE

    Sollman, Philip

    2004-01-01

    Barbula flavicans D.G. Long replaces Barbula consanguinea (Thwaites & Mitt.) A. Jaeger sensu Eddy. This is a variable species. The types of several mainly Asian taxa were studied. Fifteen taxa are proposed as new synonyms of Barbula flavicans. Barbula (?) anceps Cardot is Barbula arcuata Griff.

  10. Triterpenes of toxic and non-toxic taxa of Lantana camara.

    Science.gov (United States)

    Hart, N K; Lamberton, J A; Sioumis, A A; Suares, H; Seawright, A A

    1976-04-15

    The taxa of Lantana camara toxic to animals contain lantadene A lantadene B, whereas in two non-toxic taxa other triterpenes predominate. Several new triterpenes have been characterized. Contrary to earlier claims, lantadene A and to a lesser extent lantadene B are toxic when administered intraruminally to sheep.

  11. Quantitative relationships between vegetation and several pollen taxa in surface soil from North China

    Institute of Scientific and Technical Information of China (English)

    2000-01-01

    According to the vegetation investigation and pollen analysis of surface samples sampled along a precipitation gradient of the Northeast China Transect (NECT), several pollen taxa, including Pinus, Betula, Quercus, Tilia, Acer, Ulmus, Artemisia, Chenopodiaceae, Gramineae and Cyperaceae, were chosen to make the regression and correlation analyses. The results indicated that there exists a close relationship between vegetation and pollen taxa in surface samples. The regression parameters for ten taxa in the forests in the eastern part of NECT were different from those in the steppes in the western part. Pinus, Betula, Artemisia and Chenopodiaceae, which have large slope and y-intercept terms, were over-representative taxa. Acer, Gramineae and Cyperaceae, which have small slope and y-intercept terms, were under-representative taxa. Quercus, Tilia and Ulmus whose slope terms have negative correlation with y-intercept terms were equi-representative taxa. The pollen taxa with large slope or large y-intercept terms have small variability coefficients, implying that the slope and y-intercept terms for these pollen taxa are of high accuracy in the estimation of plant abundance from pollen frequencies.

  12. Biology and ecology of Pleuroptya silicalis (Lepidoptera: Crambidae) and Urbanus esmeraldus (Lepidoptera: Hesperiidae): defence tactics and interactions with ants on shrubs of Urera baccifera (Urticaceae)

    OpenAIRE

    Alice Ramos de Moraes

    2006-01-01

    Resumo: 1. O presente trabalho investiga aspectos comportamentais e de história natural de duas espécies de lepidópteros que se alimentam de Urera baccifera (Urticaceae), uma planta visitada por 22 espécies de formigas. Ambas as espécies, Pleuroptya silicalis (Lepidoptera: Crambidae) e Urbanus esmeraldus (Lepidoptera: Hesperiidae), constróem abrigos foliares e apresentam diferentes mecanismos de defesa contra predação. Por exemplo, quando perturbadas, larvas de P. silicalis sacodem o corpo vi...

  13. Frequency and Complexity of De Novo Structural Mutation in Autism

    Science.gov (United States)

    Brandler, William M.; Antaki, Danny; Gujral, Madhusudan; Noor, Amina; Rosanio, Gabriel; Chapman, Timothy R.; Barrera, Daniel J.; Lin, Guan Ning; Malhotra, Dheeraj; Watts, Amanda C.; Wong, Lawrence C.; Estabillo, Jasper A.; Gadomski, Therese E.; Hong, Oanh; Fajardo, Karin V. Fuentes; Bhandari, Abhishek; Owen, Renius; Baughn, Michael; Yuan, Jeffrey; Solomon, Terry; Moyzis, Alexandra G.; Maile, Michelle S.; Sanders, Stephan J.; Reiner, Gail E.; Vaux, Keith K.; Strom, Charles M.; Zhang, Kang; Muotri, Alysson R.; Akshoomoff, Natacha; Leal, Suzanne M.; Pierce, Karen; Courchesne, Eric; Iakoucheva, Lilia M.; Corsello, Christina; Sebat, Jonathan

    2016-01-01

    Genetic studies of autism spectrum disorder (ASD) have established that de novo duplications and deletions contribute to risk. However, ascertainment of structural variants (SVs) has been restricted by the coarse resolution of current approaches. By applying a custom pipeline for SV discovery, genotyping, and de novo assembly to genome sequencing of 235 subjects (71 affected individuals, 26 healthy siblings, and their parents), we compiled an atlas of 29,719 SV loci (5,213/genome), comprising 11 different classes. We found a high diversity of de novo mutations, the majority of which were undetectable by previous methods. In addition, we observed complex mutation clusters where combinations of de novo SVs, nucleotide substitutions, and indels occurred as a single event. We estimate a high rate of structural mutation in humans (20%) and propose that genetic risk for ASD is attributable to an elevated frequency of gene-disrupting de novo SVs, but not an elevated rate of genome rearrangement. PMID:27018473

  14. LEPIDOPTERA (INSECTA OF PROPOSED SPECIALLY PROTECTED NATURAL AREA ‘BELOKURIKHA NATURE PARK’ (NORTHERN ALTAI. FIRST RESULTS

    Directory of Open Access Journals (Sweden)

    S.V. Vasilenko

    2016-03-01

    Full Text Available 149 Lepidoptera species from 16 families were reported for the territory of the proposed protected area "Belokurikha Natural Park". This list is the primary data on the fauna of Lepidoptera in the region. Most of the species belongs to Euro-Siberian and Transpalaearctic groups.

  15. Lepidoptera outbreaks in response to successional changes after the passage of Hurricane Hugo in Puerto Rico Rico

    Science.gov (United States)

    J.A. Torres

    1992-01-01

    Fifteen species of Lepidoptera occurred in large numbers in spring and early summer after the passage of Hurricane Hugo over the north-east of Puerto Rico. Spodoptera eridania (Noctuidae) was the most common of the larvae and fed on 56 plant species belonging to 31 families. All the Lepidoptera fed on early successional vegetation. Some of the plants represent new host...

  16. Comparative description of ten transcriptomes of newly sequenced invertebrates and efficiency estimation of genomic sampling in non-model taxa

    Directory of Open Access Journals (Sweden)

    Riesgo Ana

    2012-11-01

    Full Text Available Abstract Introduction Traditionally, genomic or transcriptomic data have been restricted to a few model or emerging model organisms, and to a handful of species of medical and/or environmental importance. Next-generation sequencing techniques have the capability of yielding massive amounts of gene sequence data for virtually any species at a modest cost. Here we provide a comparative analysis of de novo assembled transcriptomic data for ten non-model species of previously understudied animal taxa. Results cDNA libraries of ten species belonging to five animal phyla (2 Annelida [including Sipuncula], 2 Arthropoda, 2 Mollusca, 2 Nemertea, and 2 Porifera were sequenced in different batches with an Illumina Genome Analyzer II (read length 100 or 150 bp, rendering between ca. 25 and 52 million reads per species. Read thinning, trimming, and de novo assembly were performed under different parameters to optimize output. Between 67,423 and 207,559 contigs were obtained across the ten species, post-optimization. Of those, 9,069 to 25,681 contigs retrieved blast hits against the NCBI non-redundant database, and approximately 50% of these were assigned with Gene Ontology terms, covering all major categories, and with similar percentages in all species. Local blasts against our datasets, using selected genes from major signaling pathways and housekeeping genes, revealed high efficiency in gene recovery compared to available genomes of closely related species. Intriguingly, our transcriptomic datasets detected multiple paralogues in all phyla and in nearly all gene pathways, including housekeeping genes that are traditionally used in phylogenetic applications for their purported single-copy nature. Conclusions We generated the first study of comparative transcriptomics across multiple animal phyla (comparing two species per phylum in most cases, established the first Illumina-based transcriptomic datasets for sponge, nemertean, and sipunculan species, and

  17. Comparative description of ten transcriptomes of newly sequenced invertebrates and efficiency estimation of genomic sampling in non-model taxa.

    Science.gov (United States)

    Riesgo, Ana; Andrade, Sónia C S; Sharma, Prashant P; Novo, Marta; Pérez-Porro, Alicia R; Vahtera, Varpu; González, Vanessa L; Kawauchi, Gisele Y; Giribet, Gonzalo

    2012-11-29

    Traditionally, genomic or transcriptomic data have been restricted to a few model or emerging model organisms, and to a handful of species of medical and/or environmental importance. Next-generation sequencing techniques have the capability of yielding massive amounts of gene sequence data for virtually any species at a modest cost. Here we provide a comparative analysis of de novo assembled transcriptomic data for ten non-model species of previously understudied animal taxa. cDNA libraries of ten species belonging to five animal phyla (2 Annelida [including Sipuncula], 2 Arthropoda, 2 Mollusca, 2 Nemertea, and 2 Porifera) were sequenced in different batches with an Illumina Genome Analyzer II (read length 100 or 150 bp), rendering between ca. 25 and 52 million reads per species. Read thinning, trimming, and de novo assembly were performed under different parameters to optimize output. Between 67,423 and 207,559 contigs were obtained across the ten species, post-optimization. Of those, 9,069 to 25,681 contigs retrieved blast hits against the NCBI non-redundant database, and approximately 50% of these were assigned with Gene Ontology terms, covering all major categories, and with similar percentages in all species. Local blasts against our datasets, using selected genes from major signaling pathways and housekeeping genes, revealed high efficiency in gene recovery compared to available genomes of closely related species. Intriguingly, our transcriptomic datasets detected multiple paralogues in all phyla and in nearly all gene pathways, including housekeeping genes that are traditionally used in phylogenetic applications for their purported single-copy nature. We generated the first study of comparative transcriptomics across multiple animal phyla (comparing two species per phylum in most cases), established the first Illumina-based transcriptomic datasets for sponge, nemertean, and sipunculan species, and generated a tractable catalogue of annotated genes (or gene

  18. Necessidade de novos antibióticos

    OpenAIRE

    Brito,Monique Araujo de; Cordeiro, Benedito Carlos

    2012-01-01

    Os antibióticos são uma classe de fármacos indispensável; sem eles haveria perdas na expectativa de vida que conquistamos ao longo de décadas. Mas a potência dos antibióticos está ameaçada pela resistência bacteriana. Há uma explosão de casos reportados na literatura. De fato, o aumento da resistência bacteriana, principalmente entre patógenos potencialmente perigosos, tem levado ao aumento na necessidade de novos fármacos e novas classes de antibióticos, tanto para infecções adquiridas em ho...

  19. [De novo sarcoidosis after kidney transplantation].

    Science.gov (United States)

    Kisner, T; Pfister, R; Engels, M; Benzing, T; Michels, G

    2012-03-01

    A 39-year-old man complained of unspecific chest pains four years after kidney transplantation. Laboratory tests revealed a slow increase of retentions values; the value of soluble IL-2 receptor was slightly elevated. Computed tomography of the chest confirmed mediastinal and bilateral hilar masses. The broncho-alveolar lavage (BAL) showed a marked increase of the CD4/CD8 T-lymphocyte ratio and the aspiration cytology of these lymphadenopathies revealed the cytopathological characteristics of sarcoidosis. An asymptomatic stage I sarcoidosis was diagnosed, and the immunosuppressive treatment with cyclosporine, mycophenolatmofetil and prednisone was retained. The patient has remained asymptomatic for now six months. When bilateral hilar / mediastinal lymphadenopathies occur after organ transplantation with immunosuppression de novo sarcoidosis should be taken into account. © Georg Thieme Verlag KG Stuttgart · New York.

  20. De Novo Kidney Regeneration with Stem Cells

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    Shinya Yokote

    2012-01-01

    Full Text Available Recent studies have reported on techniques to mobilize and activate endogenous stem-cells in injured kidneys or to introduce exogenous stem cells for tissue repair. Despite many recent advantages in renal regenerative therapy, chronic kidney disease (CKD remains a major cause of morbidity and mortality and the number of CKD patients has been increasing. When the sophisticated structure of the kidneys is totally disrupted by end stage renal disease (ESRD, traditional stem cell-based therapy is unable to completely regenerate the damaged tissue. This suggests that whole organ regeneration may be a promising therapeutic approach to alleviate patients with uncured CKD. We summarize here the potential of stem-cell-based therapy for injured tissue repair and de novo whole kidney regeneration. In addition, we describe the hurdles that must be overcome and possible applications of this approach in kidney regeneration.

  1. Seedling Growth and Physiological Responses of Sixteen Eucalypt Taxa under Controlled Water Regime

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    Paulo H. M. Silva

    2016-05-01

    Full Text Available We assessed growth and physiological responses of Eucalyptus and Corymbia species to water limitation aiming to widen possibilities for plantations in dry climatic conditions. We selected 16 taxa: 4 Corymbia and 12 Eucalyptus species from the Subgenera Symphyomyrtus. Seedlings were evaluated from 100 to 170 days after sowing. Growth and physiological traits showed significant differences among taxa and between two levels of water availability. Water limitation significantly impacted biomass production and physiological characteristics, however in different levels. Leaf area and biomass production decreased 15%–48% under water limitation among taxa. Eucalyptus moluccana, CCV 2, and VM1 (drought tolerant clone showed the largest decrease in leaf area. Transpiration across taxa decreased 30%–57% and photosynthesis 14%–48% under water limited condition. Taxa from cold environments were less responsive in leaf area reduction under water limitation, and taxa from Exsertaria section showed lower reduction in photosynthesis (E. camaldulensis showed the lowest reduction. Responses to water limitation are related to the environment of origin. E. molucana, the only Adnataria species from a high precipitation region (>1500 mm year−1, was one of the most sensitive in reduction of biomass production, different behavior from the other Adnataria species, originated in regions with rainfall <750 mm year−1. Water limitation increased leaf-level water use efficiency by 18% on average, 8% in E. longirostrata, and 28% in E. camaldulensis, E. brassiana, and E. crebra. Growth and physiological responses observed show the potential of different eucalypts taxa to tolerate water limited environments.

  2. Comparative evolutionary analyses of beta globin gene in eutherian, dinosaurian and neopterygii taxa

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    Gauri Awasthi, Garima Srivastava & Aparup Das

    2011-03-01

    Full Text Available Background & objectives: Comparative genomics and evolutionary analyses of conserved genes have enabled usto understand the complexity of genomes of closely related species. For example: -globin gene present inhuman hemoglobin is one such gene that has experienced many genetic changes in many related taxa andproduced more than 600 variants. One of the variant, HBS causes sickle-cell anemia in humans but offersprotection against severe malaria due to Plasmodium falciparum. In the present study, we characterized andperformed evolutionary comparative analyses of the -globin gene in different related and unrelated taxa tohave a comprehensive view of its evolution.Methods: DNA and protein sequences of -globin gene were downloaded from NCBI and characterized in detailin nine eutherian (Homo sapiens, Pan troglodytes, Macaca mulatta, Mus musculus, Rattus norvegicus, Bostaurus, Canis familiaris, Equus caballus, Oryctolagus cuniculus, a dinosaurian (Gallus gallus and a neopterygii(Danio rerio taxa. Three more eutherian (Papio anubis, Ovis aries and Sus scrofa taxa were included for ananalysis at the protein level but not included at the gene level owing to lack of genomic information. Computationaland phylogenetic analyses were performed using evolutionary comparative approach.Results: Results of comparative and phylogenetic analyses revealed less conservation of genetic architecture of-globin compared to its protein architecture in all eutherian taxa. Both dinosaurian and neopterygii taxa servedas outgroups and varied at gene and protein levels.Interpretation & conclusion: Most remarkably, all primates from eutherian taxa including P. anubis showedonly nine codon position differences and an absolute similarity between H. sapiens and P. troglodytes. Absoluteconservation of coding region in Equus caballus (horse was observed. The results were discussed with aninference on the role of evolutionary forces in maintaining such close similarities

  3. História natural da mariposa Chlamydastis smodicopa (Meyrick (Lepidoptera, Elachistidae, Stenomatinae Natural history of the moth Chlamydastis smodicopa (Meyrick (Lepidoptera, Elachistidae, Stenomatinae

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    Helena C. Morais

    2005-09-01

    Full Text Available O gênero Chlamydastis Meyrick, 1916 (Elachistidae, Stenomatinae possui 82 espécies descritas da região Neotropical. Chlamydastis smodicopa (Meyrick, 1915 tem local tipo o Estado de Amazonas, Brasil. No cerrado de Brasília, Distrito Federal, as lagartas de C. smodicopa são folívoras externas restritas à planta hospedeira Styrax ferrugineus Nees & Mart. (Styracaceae. De junho de 2000 a junho de 2001, foram vistoriados 243 indivíduos de S. ferrugineus, e encontradas 38 espécies de lagartas de Lepidoptera em 26% das plantas examinadas. C. smodicopa foi a espécie mais comum em S. ferrugineus mas, apesar disso, ocorreu somente em 7% das plantas. As lagartas apresentam no último ínstar cabeça castanho escuro, placa protorácica marron com faixa amarela na sua margem anterior, tegumento cinza com faixas dorsais e subdorsais marron e amarela, e atingem 30 mm de comprimento. Lagartas são solitárias e constróem abrigos ovóides com duas folhas unidas com fios de seda e com as duas extremidades abertas: uma utilizada para alimentação e a outra para deposição de fezes. Um novo abrigo é construído, à medida que as lagartas crescem ou quando as folhas tornam-se senescentes. No último instar a lagarta constrói um casulo no interior do abrigo foliar, onde ocorre o desenvolvimento da pupa que, em condições de laboratório, teve uma média de 18 dias. As lagartas tiveram a maior freqüência de agosto a setembro, no final da estação seca no cerrado.The genus Chlamydastis Meyrick, 1916 (Elachistidae, Stenomatinae contains 82 described species from Neotropical region, including Chlamydastis smodicopa (Meyrick, 1915, with the local type in Amazonas State, Brazil. In the cerrado (savanna woodland area of Brasilia, Federal District, their larvae are external folivorous and restricted to the host plant Styrax ferrugineus Nees & Mart. (Styracaceae. Over the study period from June 2000 to June 2001, we inspected 243 S. ferrugineus individuals

  4. Morfologia comparada do tórax das espécies Sulbrasileiras de Morphinae (Lepidoptera, Nymphalidae Compareid thorax morphology of South brazilian Morphinae species (Lepidoptera, Nymphalidae

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    Ivana Gavassi Bilotta

    1994-01-01

    Full Text Available A detailed study of the thorax morphology and his appendices of adults, males and females, of the following south Brazilian Morphinae species (Lepidoptera, Nymphalidae is presented: Morpho helenor violaceus Fruhstorfer, 1912, Iphimedeia hercules(Dalman, 1823, Iphixibia anaxibia (Esper, 1801. Cytheritis portis thamyris (C. Felder & R. Felder, 1867, Cytherilis aega (Huebner, 1822. Pessonia catenaria (Perry, 1811. Grasseia menelaus nestira (Huebner, 1821.

  5. Morfologia comparada do abdome das espécies sulbrasileiras de Morphinae (Lepidoptera, Nymphalidae Compared abdomen morphology of South brazilian Morphinae species (Lepidoptera, Nymphalidae

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    Ivana Gavassi Bilotta

    1994-01-01

    Full Text Available A detailed study of the morphology of abdomen and genitalia of adults, males and females, of the following south Brazilian Morphinae species (Lepidoptera, Nymphalidae is presented: Morpho helenor violacetis Fruhstorfer. 1912. Iphimedeia hercules (Daiman, 1823. Iphixibia anaxibia (Esper, 1801. Cytheritis portis thamyris (C. Felder & R. Felder, 1867, Cytheritis aega (Huebner, 1822, Pessonia catenaria (Perry, 1811, Grasseia menelaus nestira (Huebner, 1821.

  6. The Lepidoptera of White Sands National Monument, Otero County, New Mexico, USA 4. A new species of Schinia Hübner, 1818 (Lepidoptera, Noctuidae, Heliothinae

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    Eric Metzler

    2011-11-01

    Full Text Available In 2006 the U.S. National Park Service initiated a long term study of the Lepidoptera at White Sands National Monument, Otero County, New Mexico. Schinia poguei sp. n., described here, was discovered in 2007, the second year of the study. The male and female adult moths and genitalia are illustrated.

  7. The Lepidoptera of White Sands National Monument, Otero County, New Mexico, USA 3. A new species of Aleptina Dyar, 1902 (Lepidoptera, Noctuidae, Amphipyrinae, Psaphidini

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    Eric Metzler

    2011-11-01

    Full Text Available In 2006 the US National Park Service initiated a long-term study of the Lepidoptera at White Sands National Monument, Otero County, New Mexico. Aleptina arenaria sp. n., described here, was discovered in 2008, the second year of the study. The adult moths and male and female genitalia are illustrated.

  8. Mortality Dynamics of Spodoptera frugiperda (Lepidoptera: Noctuidae) Immatures in Maize.

    Science.gov (United States)

    Varella, Andrea Corrêa; Menezes-Netto, Alexandre Carlos; Alonso, Juliana Duarte de Souza; Caixeta, Daniel Ferreira; Peterson, Robert K D; Fernandes, Odair Aparecido

    2015-01-01

    We characterized the dynamics of mortality factors affecting immature developmental stages of the fall armyworm, Spodoptera frugiperda (J.E. Smith) (Lepidoptera: Noctuidae). Multiple decrement life tables for egg and early larval stages of S. frugiperda in maize (Zea mays L.) fields were developed with and without augmentative releases of Telenomus remus Nixon (Hymenoptera: Platygastridae) from 2009 to 2011. Total egg mortality ranged from 73 to 81% and the greatest egg mortality was due to inviability, dislodgement, and predation. Parasitoids did not cause significant mortality in egg or early larval stages and the releases of T. remus did not increase egg mortality. Greater than 95% of early larvae died from predation, drowning, and dislodgment by rainfall. Total mortality due to these factors was largely irreplaceable. Results indicate that a greater effect in reducing generational survival may be achieved by adding mortality to the early larval stage of S. frugiperda.

  9. Hyperspectral optical imaging of two different species of lepidoptera

    Science.gov (United States)

    Medina, José Manuel; Nascimento, Sérgio Miguel Cardoso; Vukusic, Pete

    2011-05-01

    In this article, we report a hyperspectral optical imaging application for measurement of the reflectance spectra of photonic structures that produce structural colors with high spatial resolution. The measurement of the spectral reflectance function is exemplified in the butterfly wings of two different species of Lepidoptera: the blue iridescence reflected by the nymphalid Morpho didius and the green iridescence of the papilionid Papilio palinurus. Color coordinates from reflectance spectra were calculated taking into account human spectral sensitivity. For each butterfly wing, the observed color is described by a characteristic color map in the chromaticity diagram and spreads over a limited volume in the color space. The results suggest that variability in the reflectance spectra is correlated with different random arrangements in the spatial distribution of the scales that cover the wing membranes. Hyperspectral optical imaging opens new ways for the non-invasive study and classification of different forms of irregularity in structural colors.

  10. The complete mitochondrial genome of Gonepteryx mahaguru (Lepidoptera: Pieridae).

    Science.gov (United States)

    Yang, Jianing; Xu, Chang; Li, Jialian; Lei, Ying; Fan, Cheng; Gao, Yuan; Xu, Chongren; Wang, Rongjiang

    2016-01-01

    The complete mitochondrial genome of Gonepteryx mahaguru (Lepidoptera: Pieridae) is 15,221 bp in length, containing 13 protein-coding genes (PCGs), 22 transfer RNA genes (tRNAs), 2 ribosomal RNA genes (LrRNA and SrRNA) and 1 non-coding A + T-rich region. The nucleotide composition is significantly biased toward A + T (80.9%). All PCGs are initiated by classical ATN codon, with the exception of COI, which begins with TTA codon. Nine PCGs harbor the complete stop codon TAA, whereas COI, COII, ND4 and ND5 stop with incomplete codons, single T or TA. All tRNAs can be folded into the typical cloverleaf secondary structure, except for tRNA(Ser)(AGN). The A + T content of AT-rich region is 95.2%, same to the highest one in the known species in Pieridae.

  11. New Records of Seven Eupithecia (Lepidoptera: Geometridae from Korea

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    Choi, Sei-Woong

    2015-04-01

    Full Text Available The genus Eupithecia Curtis is the largest taxon in Lepidoptera (more than 1,500 species worldwide and the adults of the genus are characterized by small in size, cryptically colored grayish and brownish forewing, and indistinct basal, ante- and postmedial transverse lines mostly with a definite discal spot on the forewing. Forty-four species have been reported so far in Korea. Herein, we present the first report on seven species of Eupithecia: Eupithecia rufescens Butler (1878, Eupithecia costiconvexa Inoue (1979, Eupithecia daemionata Dietze (1904, Eupithecia persuastrix Mironov (1990, Eupithecia actaeata Walderdorff (1869, Eupithecia suboxydata Staudinger (1897 and Eupithecia costimacularia Leech (1897. Diagnosis, descriptions and figures of the available species are provided.

  12. A historical review of the classification of Erebinae (Lepidoptera: Erebidae).

    Science.gov (United States)

    Homziak, Nicholas T; Breinholt, Jesse W; Kawahara, Akito Y

    2016-11-10

    Erebidae is one of the most diverse families within the order Lepidoptera (butterflies and moths), with nearly 25,000 described species. The nominal subfamily Erebinae is among the most species rich and taxonomically complex. It reaches its highest diversity in the tropics, where much of the fauna remains undescribed. Species in this subfamily feed on a broad range of host plants, with associated radiations on grasses and legumes, and some species are pests of agriculture and forestry. The Erebinae, as defined today, comprises a large portion of the former noctuid subfamily Catocalinae. However, many lineages have tenuous or uncertain systematic placement. Here, we review the complex historical classification of Erebinae, and discuss the possible placement of some of these lineages in light of traditional morphological groupings and recent molecular phylogenetic analyses. We present an updated list of named erebine tribes and their relationships, and identify morphological traits from literature used to group genera within these tribes.

  13. Hyperspectral optical imaging of two different species of lepidoptera

    Directory of Open Access Journals (Sweden)

    Vukusic Pete

    2011-01-01

    Full Text Available Abstract In this article, we report a hyperspectral optical imaging application for measurement of the reflectance spectra of photonic structures that produce structural colors with high spatial resolution. The measurement of the spectral reflectance function is exemplified in the butterfly wings of two different species of Lepidoptera: the blue iridescence reflected by the nymphalid Morpho didius and the green iridescence of the papilionid Papilio palinurus. Color coordinates from reflectance spectra were calculated taking into account human spectral sensitivity. For each butterfly wing, the observed color is described by a characteristic color map in the chromaticity diagram and spreads over a limited volume in the color space. The results suggest that variability in the reflectance spectra is correlated with different random arrangements in the spatial distribution of the scales that cover the wing membranes. Hyperspectral optical imaging opens new ways for the non-invasive study and classification of different forms of irregularity in structural colors.

  14. Mortality Dynamics of Spodoptera frugiperda (Lepidoptera: Noctuidae) Immatures in Maize

    Science.gov (United States)

    Varella, Andrea Corrêa; Menezes-Netto, Alexandre Carlos; Alonso, Juliana Duarte de Souza; Caixeta, Daniel Ferreira; Peterson, Robert K. D.; Fernandes, Odair Aparecido

    2015-01-01

    We characterized the dynamics of mortality factors affecting immature developmental stages of the fall armyworm, Spodoptera frugiperda (J.E. Smith) (Lepidoptera: Noctuidae). Multiple decrement life tables for egg and early larval stages of S. frugiperda in maize (Zea mays L.) fields were developed with and without augmentative releases of Telenomus remus Nixon (Hymenoptera: Platygastridae) from 2009 to 2011. Total egg mortality ranged from 73 to 81% and the greatest egg mortality was due to inviability, dislodgement, and predation. Parasitoids did not cause significant mortality in egg or early larval stages and the releases of T. remus did not increase egg mortality. Greater than 95% of early larvae died from predation, drowning, and dislodgment by rainfall. Total mortality due to these factors was largely irreplaceable. Results indicate that a greater effect in reducing generational survival may be achieved by adding mortality to the early larval stage of S. frugiperda. PMID:26098422

  15. De Novo Coding Variants Are Strongly Associated with Tourette Disorder

    DEFF Research Database (Denmark)

    Willsey, A Jeremy; Fernandez, Thomas V; Yu, Dongmei

    2017-01-01

    Whole-exome sequencing (WES) and de novo variant detection have proven a powerful approach to gene discovery in complex neurodevelopmental disorders. We have completed WES of 325 Tourette disorder trios from the Tourette International Collaborative Genetics cohort and a replication sample of 186...... trios from the Tourette Syndrome Association International Consortium on Genetics (511 total). We observe strong and consistent evidence for the contribution of de novo likely gene-disrupting (LGD) variants (rate ratio [RR] 2.32, p = 0.002). Additionally, de novo damaging variants (LGD and probably...

  16. A transcontinental challenge--a test of DNA barcode performance for 1,541 species of Canadian Noctuoidea (Lepidoptera).

    Science.gov (United States)

    Zahiri, Reza; Lafontaine, J Donald; Schmidt, B Christian; Dewaard, Jeremy R; Zakharov, Evgeny V; Hebert, Paul D N

    2014-01-01

    This study provides a first, comprehensive, diagnostic use of DNA barcodes for the Canadian fauna of noctuoids or "owlet" moths (Lepidoptera: Noctuoidea) based on vouchered records for 1,541 species (99.1% species coverage), and more than 30,000 sequences. When viewed from a Canada-wide perspective, DNA barcodes unambiguously discriminate 90% of the noctuoid species recognized through prior taxonomic study, and resolution reaches 95.6% when considered at a provincial scale. Barcode sharing is concentrated in certain lineages with 54% of the cases involving 1.8% of the genera. Deep intraspecific divergence exists in 7.7% of the species, but further studies are required to clarify whether these cases reflect an overlooked species complex or phylogeographic variation in a single species. Non-native species possess higher Nearest-Neighbour (NN) distances than native taxa, whereas generalist feeders have lower NN distances than those with more specialized feeding habits. We found high concordance between taxonomic names and sequence clusters delineated by the Barcode Index Number (BIN) system with 1,082 species (70%) assigned to a unique BIN. The cases of discordance involve both BIN mergers and BIN splits with 38 species falling into both categories, most likely reflecting bidirectional introgression. One fifth of the species are involved in a BIN merger reflecting the presence of 158 species sharing their barcode sequence with at least one other taxon, and 189 species with low, but diagnostic COI divergence. A very few cases (13) involved species whose members fell into both categories. Most of the remaining 140 species show a split into two or three BINs per species, while Virbia ferruginosa was divided into 16. The overall results confirm that DNA barcodes are effective for the identification of Canadian noctuoids. This study also affirms that BINs are a strong proxy for species, providing a pathway for a rapid, accurate estimation of animal diversity.

  17. Phylogenetic molecular species delimitations unravel potential new species in the pest genus Spodoptera Guenee, 1852 (Lepidoptera, Noctuidae.

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    Pascaline Dumas

    Full Text Available Nowadays molecular species delimitation methods promote the identification of species boundaries within complex taxonomic groups by adopting innovative species concepts and theories (e.g. branching patterns, coalescence. As some of them can efficiently deal with large single-locus datasets, they could speed up the process of species discovery compared to more time consuming molecular methods, and benefit from the existence of large public datasets; these methods can also particularly favour scientific research and actions dealing with threatened or economically important taxa. In this study we aim to investigate and clarify the status of economically important moths species belonging to the genus Spodoptera (Lepidoptera, Noctuidae, a complex group in which previous phylogenetic analyses and integrative approaches already suggested the possible occurrence of cryptic species and taxonomic ambiguities. In this work, the effectiveness of innovative (and faster species delimitation approaches to infer putative species boundaries has been successfully tested in Spodoptera, by processing the most comprehensive dataset (in terms of number of species and specimens ever achieved; results are congruent and reliable, irrespective of the set of parameters and phylogenetic models applied. Our analyses confirm the existence of three potential new species clusters (for S. exigua (Hübner, 1808, S. frugiperda (J.E. Smith, 1797 and S. mauritia (Boisduval, 1833 and support the synonymy of S. marima (Schaus, 1904 with S. ornithogalli (Guenée, 1852. They also highlight the ambiguity of the status of S. cosmiodes (Walker, 1858 and S. descoinsi Lalanne-Cassou & Silvain, 1994. This case study highlights the interest of molecular species delimitation methods as valuable tools for species discovery and to emphasize taxonomic ambiguities.

  18. Can RNA-Seq Resolve the Rapid Radiation of Advanced Moths and Butterflies (Hexapoda: Lepidoptera: Apoditrysia)? An Exploratory Study

    Science.gov (United States)

    Bazinet, Adam L.; Cummings, Michael P.; Mitter, Kim T.; Mitter, Charles W.

    2013-01-01

    Recent molecular phylogenetic studies of the insect order Lepidoptera have robustly resolved family-level divergences within most superfamilies, and most divergences among the relatively species-poor early-arising superfamilies. In sharp contrast, relationships among the superfamilies of more advanced moths and butterflies that comprise the mega-diverse clade Apoditrysia (ca. 145,000 spp.) remain mostly poorly supported. This uncertainty, in turn, limits our ability to discern the origins, ages and evolutionary consequences of traits hypothesized to promote the spectacular diversification of Apoditrysia. Low support along the apoditrysian “backbone” probably reflects rapid diversification. If so, it may be feasible to strengthen resolution by radically increasing the gene sample, but case studies have been few. We explored the potential of next-generation sequencing to conclusively resolve apoditrysian relationships. We used transcriptome RNA-Seq to generate 1579 putatively orthologous gene sequences across a broad sample of 40 apoditrysians plus four outgroups, to which we added two taxa from previously published data. Phylogenetic analysis of a 46-taxon, 741-gene matrix, resulting from a strict filter that eliminated ortholog groups containing any apparent paralogs, yielded dramatic overall increase in bootstrap support for deeper nodes within Apoditrysia as compared to results from previous and concurrent 19-gene analyses. High support was restricted mainly to the huge subclade Obtectomera broadly defined, in which 11 of 12 nodes subtending multiple superfamilies had bootstrap support of 100%. The strongly supported nodes showed little conflict with groupings from previous studies, and were little affected by changes in taxon sampling, suggesting that they reflect true signal rather than artifacts of massive gene sampling. In contrast, strong support was seen at only 2 of 11 deeper nodes among the “lower”, non-obtectomeran apoditrysians. These represent

  19. Los "intelectuales" y el Estado Novo

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    Luís REIS TORGAL

    2010-02-01

    Full Text Available RESUMEN: El concepto de “intelectual” es difícil de definir y sin duda se debate constantemente. Sin embargo, es importante reflexionar sobre él a fin de comprender su significado y los problemas que implica. Sea como fuere, a un Estado autoritario “moderno” se le supone una única ideología que tiene que difundirse por medio de una propaganda bien organizada, proceso en el que los intelectuales desempeñan un papel significativo. El “Nuevo Estado” de Salazar encaja en esta categoría y sin duda el conocimiento acerca de sus “intelectuales” es fundamental. En este artículo, el objetivo es proporcionar algunos ejemplos interesantes de “intelectuales” o de simples “funcionarios políticos” con inclinación intelectual a fin de indicar el sentido y complejidad de un estudio con una dimensión distinta sobre este asunto. A este fin han sido seleccionadas tres personalidades responsables de la actividad ideológica y cultural de gran relieve en el Estado de Salazar: António Ferro, João Ameal y Costa Brochado. Palabras clave: Estado Novo; Authotitarianism; Salazar, António de Oliveira; Intellectuals; Ferro, António; Brochado, Idalino da Costa; Ameal, João. ABSTRACT: The concept of the “intellectual” is difficult to define and undoubtedly constantly debated. It is nevertheless important to reflect on it in order to understand its meaning and the problems involved with it. Be that as it may, a “modern” authoritarian State presumes a single ideology which has to be diffused by means of well-organised propaganda, in which process “intellectuals” play a significant role. Salazar’s “New State” fits this category and, undoubtedly, knowledge about its “intellectuals” is fundamental. The objective in this article is to provide some interesting examples of “intellectuals” or simple “political functionar- ies” with an intellectual bent so as to indicate the sense and complexity of a study of a

  20. Marcelo Caetano : últimas razones del Estado Novo

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    Hipólito de la Torre Gómez

    2007-01-01

    Full Text Available El reformismo de Marcelo Caetano, ensayado durante sus años de gobierno, resultó insuficiente para responder a los desafíos de la sociedad portuguesa, que acabaron por desembocar en la ruptura del 25 de Abril. Las razones del fracaso de la reforma marcelista se han atribuido a menudo a las dificultades del Presidente del Consejo para maniobrar, prácticamente sin margen y sin tiempo, entre poderosas presiones políticas contrapuestas. Sin embargo, el análisis de su pensamiento político, expreso en las manifestaciones realizadas durante los años de su Gobierno, revelan que en lo sustancial su ideario nunca se salió de los parámetros ideológicos y políticos del Estado Novo. Su reformismo no iba más allá de un intento honesto de relegitimar el régimen mediante un proceso de efectiva institucionalización de la actividad política, de dinamización representativa, de modernización socioeconómica y de aperturismo liberalizador.The reformist policy of Marcelo Caetano was incapable of overcoming the challenges of Portuguese society that eventually led to the outbreak of 25th April. The reasons for this failure have been often linked to the President’s difficulties to implement changes in the midst of powerful and opposed political pressures. Nevertheless, the analysis of his political thought expressed in the speeches and statements produced during his government period, shows that essentially marcelist’s ideas never exceeded the «Estado Novo» ideological framework. So, his reforming policy never went beyond an honest attempt to renew the regime throughout a more institutionalised and representative political practice, a deeper tolerance of public liberties and an economic and social modernization. All that could at the ouset raise popular hopes, but it could never flow into democracy.

  1. Bacterial taxa-area and distance-decay relationships in marine environments.

    Science.gov (United States)

    Zinger, L; Boetius, A; Ramette, A

    2014-02-01

    The taxa-area relationship (TAR) and the distance-decay relationship (DDR) both describe spatial turnover of taxa and are central patterns of biodiversity. Here, we compared TAR and DDR of bacterial communities across different marine realms and ecosystems at the global scale. To obtain reliable global estimates for both relationships, we quantified the poorly assessed effects of sequencing depth, rare taxa removal and number of sampling sites. Slope coefficients of bacterial TARs were within the range of those of plants and animals, whereas slope coefficients of bacterial DDR were much lower. Slope coefficients were mostly affected by removing rare taxa and by the number of sampling sites considered in the calculations. TAR and DDR slope coefficients were overestimated at sequencing depth information on macroecological patterns of marine bacteria, as well as methodological and conceptual insights, at a time when biodiversity surveys increasingly make use of high-throughput sequencing technologies.

  2. Hybridization and asymmetric reproductive isolation between the closely related bryophyte taxa Polytrichum commune and P. uliginosum

    NARCIS (Netherlands)

    van der Velde, M; Bijlsma, R

    2004-01-01

    Based on genetic differentiation, the haploid dioecious bryophyte taxa Polytrichum commune and P. uliginosum have been inferred to be completely reproductively isolated. However, analysing diploid sporophytes from a sympatric population for three diagnostic microsatellite markers, we show here that

  3. [The role of heterochrony in the establishment of archetype in higher Echinoderm taxa].

    Science.gov (United States)

    Rozhnov, S V

    2009-01-01

    The analysis based on paleontological data shows that the body plans of higher echinoderm taxa were established through the combination of previously developed characters. These combinations appeared due to various heterochronies and resulted in more or less complete filling of the morphological space of logical capabilities. The maximum rank of new taxa decreased with time. New body plans of higher taxa did not replace the old plans but rather overlay them, extending the hierarchy of body plans and the respective hierarchy of taxa. The macroevolution of echinoderms and other metazoans progressed from the formation of an archetype (a general body plan) to individual details, the development of structural plans of lower levels. Heterochrony resulted in mosaic evolution and obscurity of intermediate forms.

  4. Genovo: De Novo Assembly for Metagenomes

    Science.gov (United States)

    Laserson, Jonathan; Jojic, Vladimir; Koller, Daphne

    Next-generation sequencing technologies produce a large number of noisy reads from the DNA in a sample. Metagenomics and population sequencing aim to recover the genomic sequences of the species in the sample, which could be of high diversity. Methods geared towards single sequence reconstruction are not sensitive enough when applied in this setting. We introduce a generative probabilistic model of read generation from environmental samples and present Genovo, a novel de novo sequence assembler that discovers likely sequence reconstructions under the model. A Chinese restaurant process prior accounts for the unknown number of genomes in the sample. Inference is made by applying a series of hill-climbing steps iteratively until convergence. We compare the performance of Genovo to three other short read assembly programs across one synthetic dataset and eight metagenomic datasets created using the 454 platform, the largest of which has 311k reads. Genovo's reconstructions cover more bases and recover more genes than the other methods, and yield a higher assembly score.

  5. Inter- and Intra-specific Variation among Five Erythroxylum Taxa Assessed by AFLP

    OpenAIRE

    2005-01-01

    • Background and Aims The four cultivated Erythroxylum taxa (E. coca var. coca, E. novogranatense var. novogranatense, E. coca var. ipadu and E. novogranatense var. truxillense) are indigenous to the Andean region of South America and have been cultivated for folk-medicine and, within the last century, for illicit cocaine production. The objective of this research was to assess the structure of genetic diversity within and among the four cultivated alkaloid-bearing taxa of Erythroxylum in the...

  6. MORPHOLOGICAL, ANATOMICAL AND CHEMICAL ANALYSES OF AMORPHOPHALLUS PAEONIIFOLIUS AND RELATED TAXA

    Directory of Open Access Journals (Sweden)

    Elizabeth A. Widjaja

    2014-01-01

    Full Text Available A study on the affinity of undescribed taxa of Amorphophallus with A. paeoniifolius and its related species was undertaken using numerical analyses of data derived from preserved and living specimens. The results obtained were compared with the system of classification produced by classical taxonomic methods. The Javanese wild and cultivated forms of Amorphophallus paeoniifolius respectively known locally as "Amorphophallus campanulatus f. hortensis" and "Amorphophallus campanulatus f. sylves-tris" were confirmed as two distinct but closely related taxa.

  7. Os determinantes do impacto da crise financeira internacional sobre a taxa de crescimento do PIB

    Directory of Open Access Journals (Sweden)

    Thaís Guimarães

    2015-12-01

    Full Text Available Resumo O objetivo principal deste trabalho é avaliar os determinantes do impacto da crise financeira internacional sobre a mudança na taxa de crescimento do PIB (2009-2008 para 118 países, utilizando estimações por MQO. Os resultados econométricos para os modelos estimados tendo como variável dependente a diferença entre a taxa de crescimento do PIB real em 2009, e o projetado em 2008 para 2009, indicam que apreciações cambiais e uma piora na percepção dos investidores estão associadas a uma maior diferença entre a taxa de crescimento do PIB real de 2009 em relação à taxa de crescimento projetada em 2008 para 2009. Além disso, um aumento no nível de reservas internacionais e uma melhora na situação orçamentária do governo estão associados a uma diminuição na diferença entre a taxa de crescimento do PIB real de 2009 em relação à taxa de crescimento projetada em 2008 para 2009. Os resultados das estimações para os modelos com a variável dependente dada pela diferença entre a taxa de crescimento de 2009 e 2008 revelam que o nível de reservas internacionais, a medida do grau de flexibilidade do regime cambial (classificação de regime cambial e o PIB per capita são estatisticamente significativos, e países com maior montante de reservas internacionais, PIB per capita e grau de flexibilidade cambial estão associados a uma menor variação na taxa de crescimento entre 2009 e 2008.

  8. De Novo Origin of Human Protein-Coding Genes

    Science.gov (United States)

    Wu, Dong-Dong; Irwin, David M.; Zhang, Ya-Ping

    2011-01-01

    The de novo origin of a new protein-coding gene from non-coding DNA is considered to be a very rare occurrence in genomes. Here we identify 60 new protein-coding genes that originated de novo on the human lineage since divergence from the chimpanzee. The functionality of these genes is supported by both transcriptional and proteomic evidence. RNA–seq data indicate that these genes have their highest expression levels in the cerebral cortex and testes, which might suggest that these genes contribute to phenotypic traits that are unique to humans, such as improved cognitive ability. Our results are inconsistent with the traditional view that the de novo origin of new genes is very rare, thus there should be greater appreciation of the importance of the de novo origination of genes. PMID:22102831

  9. Dalechampii oak (Quercus dalechampii Ten., an important host plant for folivorous lepidoptera larvae

    Directory of Open Access Journals (Sweden)

    Kulfan, M.

    2013-06-01

    Full Text Available We conducted a structured analysis of lepidoptera larvae taxocenoses living in leaf bearing crowns of Dalechampii oak (Quercus dalechampii Ten. in nine study plots in the Malé Karpaty Mountains (Central Europe. The differences between lepidoptera taxocenoses in individual oak stands were analyzed. A total of 96 species and 2,140 individuals were found. Species abundance peaked in May, while number of species and species diversity reached the highest values from April to May and from April to June, respectively. Abundance showed two notable peaks in flush feeders and in late summer feeders. Lepidoptera taxocenosis in the study plot Horný háj (isolated forest, high density of ants differed significantly from all other taxocenoses according to Sörensen’s index of species similarity, species diversity, analysis of similarity on the basis of permutation and pairwise tests (ANOSIM, seasonal variability of species composition, and NMDS ordination.

  10. A New Family of Moths from the Middle Jurassic(Insecta:Lepidoptera)

    Institute of Scientific and Technical Information of China (English)

    HUANG Diying; André NEL; Jo(e)l MINET

    2010-01-01

    Three lepidopteran species,from the Middle Jurassic Daohugou beds(inner Mongolia,China),are described in a new family,Mesokristeuseniidae,and new genus,Mesokristensenia,which could represent the sister group of the Micropterigidae.Mesokristensenia differs from all extant Lepidoptera,but one genus(Agathiphaga,Agathiphagidae),in retaining four median veins in the forewing,a plesiomorphy also present in many Trichoptera.Evidence for placing Mesokristensenia in the Lepidoptera includes four traits,notably a previously unrecorded autapomorphy of this insect order:beyond stem M1+2,vein M1 is bent and connected to cross-vein r-m(in both wing pairs).Among 24 characters taken into account to assess the systematic position of Mesokristensenia,12 are considered informative for a cladistic analysis involving this fossil taxon and the four suborders recognized in present-day Lepidoptera(Zeugloptera,Aglossata,Heterobathmiina,and Glossata).

  11. Global Innovation – Lessons Learned from the Novo Nordisk Case

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    Nina BIRKMOSE

    2011-06-01

    Full Text Available This paper looks at the possibilities of Western multinationals to efficiently and effectively relocate research and development to emerging markets. In order to exemplify the findings, we will use the case of Danish pharmaceutical company Novo Nordisk and their approach to the Chinese market. Thus, the research question of this paper is: Which lessons are to be learned from the case of Novo Nordisk in China?

  12. De Novo Collapsing Glomerulopathy in a Renal Allograft Recipient

    Directory of Open Access Journals (Sweden)

    Kanodia K

    2008-01-01

    Full Text Available Collapsing glomerulopathy (CG, characterized histologically by segmental/global glomerular capillary collapse, podocyte hypertrophy and hypercellularity and tubulo-interstitial injury; is characterized clinically by massive proteinuria and rapid progressive renal failure. CG is known to recur in renal allograft and rarely de novo. We report de novo CG 3 years post-transplant in a patient who received renal allograft from haplo-identical type donor.

  13. Foliage chemistry and the distribution of Lepidoptera larvae on broad-leaved trees in southern Ontario.

    Science.gov (United States)

    Ricklefs, Robert E

    2008-08-01

    This study addresses the influence of foliage chemistry on the distribution of Lepidoptera larvae across species of trees. I used ordination and analysis of principal coordinates to describe the partitioning of the larvae of 24 species of Lepidoptera over 23 species of host trees taking into account 13 chemical properties of the foliage. Canonical analysis of principal coordinates (CAP) revealed two significant axes linking the two datasets. The first constrained axis (r(2)=0.83) was associated with increasing amounts of soluble carbohydrates and decreasing amounts of hemicellulose, polyphenols, and potassium per cm(2) leaf area. The second constrained axis (r(2)=0.68) was associated with increasing amounts of soluble carbohydrates and decreasing magnesium. Variation in nitrogen and phosphorus, which are major factors in larval nutrition, were not associated with turnover of Lepidoptera species between species of host tree. Of the total variance in the positions of tree species on the first four constrained CAP axes, 44% was correlated with positions determined by foliage chemistry, 32% on the first two constrained axes. Within the space described by the first two canonical axes, congeneric species of tree clustered together, with the exception that Acer negundo was removed from other species of Acer, which grouped in a tight cluster with species in the order Fagales, as well as with Tilia and Ulmus. Alnus and Prunus also grouped together. No species of tree with a negative score on constrained axis 2 exhibited high Lepidoptera species richness, but the average number of individuals per collection tended to be high. These tree species also contain triterpenes in their leaves and harbored disproportionately more tent- and web-making species of Lepidoptera. These analyses show that patterns of distribution across host tree species within an assemblage of Lepidoptera species can be understood, at least in part, in terms of the qualities of the resources upon which

  14. denovo-db: a compendium of human de novo variants.

    Science.gov (United States)

    Turner, Tychele N; Yi, Qian; Krumm, Niklas; Huddleston, John; Hoekzema, Kendra; F Stessman, Holly A; Doebley, Anna-Lisa; Bernier, Raphael A; Nickerson, Deborah A; Eichler, Evan E

    2017-01-04

    Whole-exome and whole-genome sequencing have facilitated the large-scale discovery of de novo variants in human disease. To date, most de novo discovery through next-generation sequencing focused on congenital heart disease and neurodevelopmental disorders (NDDs). Currently, de novo variants are one of the most significant risk factors for NDDs with a substantial overlap of genes involved in more than one NDD. To facilitate better usage of published data, provide standardization of annotation, and improve accessibility, we created denovo-db (http://denovo-db.gs.washington.edu), a database for human de novo variants. As of July 2016, denovo-db contained 40 different studies and 32,991 de novo variants from 23,098 trios. Database features include basic variant information (chromosome location, change, type); detailed annotation at the transcript and protein levels; severity scores; frequency; validation status; and, most importantly, the phenotype of the individual with the variant. We included a feature on our browsable website to download any query result, including a downloadable file of the full database with additional variant details. denovo-db provides necessary information for researchers to compare their data to other individuals with the same phenotype and also to controls allowing for a better understanding of the biology of de novo variants and their contribution to disease. © The Author(s) 2016. Published by Oxford University Press on behalf of Nucleic Acids Research.

  15. De Novo Assembly and Characterization of Four Anthozoan (Phylum Cnidaria) Transcriptomes.

    Science.gov (United States)

    Kitchen, Sheila A; Crowder, Camerron M; Poole, Angela Z; Weis, Virginia M; Meyer, Eli

    2015-09-17

    Many nonmodel species exemplify important biological questions but lack the sequence resources required to study the genes and genomic regions underlying traits of interest. Reef-building corals are famously sensitive to rising seawater temperatures, motivating ongoing research into their stress responses and long-term prospects in a changing climate. A comprehensive understanding of these processes will require extending beyond the sequenced coral genome (Acropora digitifera) to encompass diverse coral species and related anthozoans. Toward that end, we have assembled and annotated reference transcriptomes to develop catalogs of gene sequences for three scleractinian corals (Fungia scutaria, Montastraea cavernosa, Seriatopora hystrix) and a temperate anemone (Anthopleura elegantissima). High-throughput sequencing of cDNA libraries produced ~20-30 million reads per sample, and de novo assembly of these reads produced ~75,000-110,000 transcripts from each sample with size distributions (mean ~1.4 kb, N50 ~2 kb), comparable to the distribution of gene models from the coral genome (mean ~1.7 kb, N50 ~2.2 kb). Each assembly includes matches for more than half the gene models from A. digitifera (54-67%) and many reasonably complete transcripts (~5300-6700) spanning nearly the entire gene (ortholog hit ratios ≥0.75). The catalogs of gene sequences developed in this study made it possible to identify hundreds to thousands of orthologs across diverse scleractinian species and related taxa. We used these sequences for phylogenetic inference, recovering known relationships and demonstrating superior performance over phylogenetic trees constructed using single mitochondrial loci. The resources developed in this study provide gene sequences and genetic markers for several anthozoan species. To enhance the utility of these resources for the research community, we developed searchable databases enabling researchers to rapidly recover sequences for genes of interest. Our

  16. Butterfly (Lepidoptera: Insecta Diversity from Different Sites of Jhagadia, Ankleshwar, District-Bharuch, Gujarat

    Directory of Open Access Journals (Sweden)

    Ashok Kumar

    2013-04-01

    Full Text Available Lepidoptera is a large order of insects that includes moths and butterflies. Lepidoptera is the second largest order in the class Insecta. Some of the butterfly species were identified as indicators of disturbance in any area. The present study conducted in three sites of taluka Jhagadia, Ankleshwar, District-Bharuch, Gujarat. In the present study a total of 484 individuals belonging to 58 species of 9 families were identified. Among which Pieridae was found to be the most dominant family. The area of study having rich diversity of butterflies, therefore it should be of great importance for conservation.

  17. Taksonomsko-faunistička studija leptira (Insecta : Lepidoptera) Fruške Gore

    OpenAIRE

    Stojanović, Dejan V.

    2012-01-01

    U studiji je dat prikaz jedanaestogodišnjih istraţivanja insekata iz reda Lepidoptera na Fruškoj gori. Registrovane su 934 vrste leptira i moljaca. Za 382 vrste Lepidoptera ili 40,89% od ukupnog broja vrsta izvršena je taksonomska verifikacija analizom hitinskih armatura genitalnih aparata. U periodu od 2001. do 2011. godine sakupljani su leptiri i moljci uglavnom uz pomoć svetlosne klopke (ţivine sijalice TEŢ WTF od 250 W, “Philips Ml“ od 100, 160, 250 i 400 W i petromaks lampe o...

  18. Fossils impact as hard as living taxa in parsimony analyses of morphology.

    Science.gov (United States)

    Cobbett, Andrea; Wilkinson, Mark; Wills, Matthew A

    2007-10-01

    Systematists disagree whether data from fossils should be included in parsimony analyses. In a handful of well-documented cases, the addition of fossil data radically overturns a hypothesis of relationships based on extant taxa alone. Fossils can break up long branches and preserve character combinations closer in time to deep splitting events. However, fossils usually require more interpretation than extant taxa, introducing greater potential for spurious codings. Moreover, because fossils often have more "missing" codings, they are frequently accused of increasing numbers of MPTs, frustrating resolution and reducing support. Despite the controversy, remarkably little is known about the effects of fossils more generally. Here we provide the first systematic study, investigating empirically the behavior of fossil and extant taxa in 45 published morphological data sets. First-order jackknifing is used to determine the effects that each terminal has on inferred relationships, on the number of MPTs, and on CI' and RI as measures of homoplasy. Bootstrap leaf stabilities provide a proxy for the contribution of individual taxa to the branch support in the rest of the tree. There is no significant difference in the impact of fossil versus extant taxa on relationships, numbers of MPTs, and CI' or RI. However, adding individual fossil taxa is more likely to reduce the total branch support of the tree than adding extant taxa. This must be weighed against the superior taxon sampling afforded by including judiciously coded fossils, providing data from otherwise unsampled regions of the tree. We therefore recommend that investigators should include fossils, in the absence of compelling and case specific reasons for their exclusion.

  19. Reconstructing the genomic content of microbiome taxa through shotgun metagenomic deconvolution.

    Science.gov (United States)

    Carr, Rogan; Shen-Orr, Shai S; Borenstein, Elhanan

    2013-01-01

    Metagenomics has transformed our understanding of the microbial world, allowing researchers to bypass the need to isolate and culture individual taxa and to directly characterize both the taxonomic and gene compositions of environmental samples. However, associating the genes found in a metagenomic sample with the specific taxa of origin remains a critical challenge. Existing binning methods, based on nucleotide composition or alignment to reference genomes allow only a coarse-grained classification and rely heavily on the availability of sequenced genomes from closely related taxa. Here, we introduce a novel computational framework, integrating variation in gene abundances across multiple samples with taxonomic abundance data to deconvolve metagenomic samples into taxa-specific gene profiles and to reconstruct the genomic content of community members. This assembly-free method is not bounded by various factors limiting previously described methods of metagenomic binning or metagenomic assembly and represents a fundamentally different approach to metagenomic-based genome reconstruction. An implementation of this framework is available at http://elbo.gs.washington.edu/software.html. We first describe the mathematical foundations of our framework and discuss considerations for implementing its various components. We demonstrate the ability of this framework to accurately deconvolve a set of metagenomic samples and to recover the gene content of individual taxa using synthetic metagenomic samples. We specifically characterize determinants of prediction accuracy and examine the impact of annotation errors on the reconstructed genomes. We finally apply metagenomic deconvolution to samples from the Human Microbiome Project, successfully reconstructing genus-level genomic content of various microbial genera, based solely on variation in gene count. These reconstructed genera are shown to correctly capture genus-specific properties. With the accumulation of metagenomic

  20. The butterfly fauna of the Nizhny Novgorod Region inventarisation experience (Insecta: Lepidoptera and its use for the regional Red Data Book building

    Directory of Open Access Journals (Sweden)

    Stanislav K. Korb

    2017-02-01

    Full Text Available Discussed is an inventory of the Lepidoptera fauna of the Nizhny Novgorod region, its current status and prospects of its study. At the moment 1412 species of Lepidoptera are known from this area, but according to preliminary estimates the total number of species of Lepidoptera in this area amounts probably between 1800 and 2000. The necessity of the inclusion of 66 species of Lepidoptera in the Red Data Book of the Nizhny Novgorod region (approximately 4.5% of its current fauna and about 3.2% of its expected fauna is discussed. The necessity of the exception of 49 species of Lepidoptera by the Red Data Book of Nizhny Novgorod region is shown. The prospects for the protection of the Lepidoptera fauna within this area are discussed. Proposed is the usage of the IUCN status criteria for regional Red List with their modification in the area of the species.

  1. NovoPen Echo® insulin delivery device

    Directory of Open Access Journals (Sweden)

    Hyllested-Winge J

    2016-01-01

    Full Text Available Jacob Hyllested-Winge,1 Thomas Sparre,2 Line Kynemund Pedersen2 1Novo Nordisk Pharma Ltd, Tokyo, Japan; 2Novo Nordisk A/S, Søborg, Denmark Abstract: The introduction of insulin pen devices has provided easier, well-tolerated, and more convenient treatment regimens for patients with diabetes mellitus. When compared with vial and syringe regimens, insulin pens offer a greater clinical efficacy, improved quality of life, and increased dosing accuracy, particularly at low doses. The portable and discreet nature of pen devices reduces the burden on the patient, facilitates adherence, and subsequently contributes to the improvement in glycemic control. NovoPen Echo® is one of the latest members of the NovoPen® family that has been specifically designed for the pediatric population and is the first to combine half-unit increment (=0.5 U of insulin dosing with a simple memory function. The half-unit increment dosing amendments and accurate injection of 0.5 U of insulin are particularly beneficial for children (and insulin-sensitive adults/elders, who often require small insulin doses. The memory function can be used to record the time and amount of the last dose, reducing the fear of double dosing or missing a dose. The memory function also provides parents with extra confidence and security that their child is taking insulin at the correct doses and times. NovoPen Echo is a lightweight, durable insulin delivery pen; it is available in two different colors, which may help to distinguish between different types of insulin, providing more confidence for both users and caregivers. Studies have demonstrated a high level of patient satisfaction, with 80% of users preferring NovoPen Echo to other pediatric insulin pens. Keywords: NovoPen Echo®, memory function, half-unit increment dosing, adherence, children, adolescents 

  2. Bacterial colonization during de novo plaque formation.

    Science.gov (United States)

    Ramberg, Per; Sekino, Satoshi; Uzel, Naciye Guzin; Socransky, Sigmund; Lindhe, Jan

    2003-11-01

    To determine microbial changes that occur during plaque formation in a dentition free of gingival inflammation. Ten subjects were recruited. The study included one preparatory period (2 weeks) and a plaque accumulation period (4 days). The volunteers exercised proper tooth cleaning methods, were scaled and received repeated professional mechanical tooth cleaning during the preparatory period. During the plaque accumulation period, the participants abstained from plaque control measures. Plaque was scored on the approximal surfaces of maxillary and mandibular premolars on Days 0, 1, 2 and 4 using a scale from 0 to 5 and according to the criteria of the Quigley and Hein Plaque Index (QHI). Supragingival plaque samples were obtained from the same intervals and surfaces and evaluated using a checkerboard DNA-DNA hybridization technique. The mean QHI increased from 0 to 1.6 (Day 4). The total number of organisms on Day 0 averaged 140 x 10(5) and increased to about 210 x 10(5) after 4 days without oral hygiene. The most dominant species on Day 0 were members of the genus Actinomyces. These organisms comprised almost 50% of the microbiota evaluated. None of the Actinomyces species increased significantly during the 4 days. Some Streptococcus species increased significantly over time as well as species of the genera Capnocytophaga, Campylobacter, Fusobacteria and Actinomyces actinomycetemcomitans. In the present investigation, the preparatory phase established a situation with minimal gingival inflammation and close to zero amounts of dental plaque. The Day 0 plaque samples exhibited high proportions of Actinomyces species. During the 4 days of no oral hygiene, there was a small increase in total numbers of organisms as well as a modest increase in the proportion of "disease-associated" taxa such as species of the "orange complex" species.

  3. Roles of epi-anecic taxa of earthworms in the organic matter recycling

    Science.gov (United States)

    Hoeffner, Kevin; Monard, Cécile; Santonja, Mathieu; Pérès, Guénola; Cluzeau, Daniel

    2017-04-01

    Given their impact on soil functioning and their interactions with soil organisms, earthworms contribute to the recycling of organic matter and participate significantly in the numerous ecosystem services provided by soils. Most studies on the role of earthworms in organic matter recycling were conducted at the level of the four functional groups (epigeic, epi-anecic, anecic strict and endogeic), but their effects at taxa level remain largely unknown. Still, within a functional group, anatomic and physiologic earthworm taxa traits are different, which should impact organic matter recycling. This study aims at determining, under controlled conditions, epi-anecic taxa differences in (i) leaf litter mass loss, (ii) assimilation and (iii) impact on microorganisms communities implied in organic matter degradation. In seperate microcosms, we chose 4 epi anecic taxa (Lumbricus rubellus, Lumbricus festivus, Lumbricus centralis and Lumbricus terrestris). Each taxon was exposed separately to leaves of three different plants (Holcus lanatus, Lolium perenne and Corylus avellana). In the same microcosm, leaves of each plant was both placed on the surface and buried 10cm deep. The experiment lasted 10 days for half of the samples and 20 days for the second half. Microorganisms communities were analysed using TRFLP in each earthworm taxon burrow walls at 20 days. We observed differences between epi-anecic taxa depending on species of plant and the duration of the experiment. Results are discussed taking into account physical and chemical properties of these 3 trophic resources (e.g. C/N ratio, phenolic compounds, percentage of lignin and cellulose...).

  4. The influence of invasive Fallopia taxa on resident plant species in two river valleys (southern Poland

    Directory of Open Access Journals (Sweden)

    Damian Chmura

    2015-03-01

    Full Text Available Riparian zones in two rivers in southern Poland were studied in terms of species composition and soil parameters in patches dominated by three knotweed taxa (Fallopia japonica, F. sachalinensis and the hybrid F. ×bohemica. The main purpose was to detect any differences in species diversity, environmental conditions and in the impact of the three Fallopia spp. on resident species. Fieldwork was conducted in spring and summer in 30 invaded plots (in total 90 subplots. It was demonstrated that vegetation dominated by particular knotweed taxa differed in response to soil pH and ammonium, nitrate, and magnesium content. Fallopia spp. (living plants and necromass had a stronger negative impact on the cover and species diversity of the resident species in summer in comparison with spring. Vegetation patches differed significantly in species composition in relation to the knotweed taxa present. These differences may be the consequence of the differentiated biotopic requirements of Fallopia taxa and the coexisting plants, or to the different impact of the knotweed taxa on the resident species.

  5. Time linkages between pollination onsets of different taxa in Perugia, Central Italy--an update.

    Science.gov (United States)

    Frenguelli, Giuseppe; Ghitarrini, Sofia; Tedeschini, Emma

    2016-01-01

    In the last decades, increasing attention has been paid to pollinosis. Numerous studies have been carried out concerning the pollination timing of allergenic plant species and the possibility to forecast its beginning and intensity using several statistical methods and models. This study proposes a simple and fast method to identify in advance the time lapse in which the pollination of some allergenic taxa should start. The times of pollination of 14 taxa were recorded in the area of Perugia (Central Italy) by means of a 7-volumetric Hirst-Type pollen trap. For a 30-year period (1984-2013), annual starting dates were calculated for each taxa, using the 5% method (Lejoly-Gabriel). The time linkages between these starting dates were then estimated, considering them in pairs and calculating linear regression coefficients. For the significantly linked species, forecasting models were obtained by means of linear regression analysis. To apply these models to the ongoing pollen season, pollination beginning of the earlier species has to be calculated using a sum-based method. From this date, through the obtained equations, it is possible to predict the approximate period in which the pollination of the second linked taxa should start. The possibility to predict the start of the pollen season of these taxa could be of great importance from the allergological point of view. In fact, an early or delayed flowering can have considerable effects in the prophylaxis programming and efficacy.

  6. Differences among major taxa in the extent of ecological knowledge across four major ecosystems.

    Directory of Open Access Journals (Sweden)

    Rebecca Fisher

    Full Text Available Existing knowledge shapes our understanding of ecosystems and is critical for ecosystem-based management of the world's natural resources. Typically this knowledge is biased among taxa, with some taxa far better studied than others, but the extent of this bias is poorly known. In conjunction with the publically available World Registry of Marine Species database (WoRMS and one of the world's premier electronic scientific literature databases (Web of Science®, a text mining approach is used to examine the distribution of existing ecological knowledge among taxa in coral reef, mangrove, seagrass and kelp bed ecosystems. We found that for each of these ecosystems, most research has been limited to a few groups of organisms. While this bias clearly reflects the perceived importance of some taxa as commercially or ecologically valuable, the relative lack of research of other taxonomic groups highlights the problem that some key taxa and associated ecosystem processes they affect may be poorly understood or completely ignored. The approach outlined here could be applied to any type of ecosystem for analyzing previous research effort and identifying knowledge gaps in order to improve ecosystem-based conservation and management.

  7. The "most wanted" taxa from the human microbiome for whole genome sequencing.

    Directory of Open Access Journals (Sweden)

    Anthony A Fodor

    Full Text Available The goal of the Human Microbiome Project (HMP is to generate a comprehensive catalog of human-associated microorganisms including reference genomes representing the most common species. Toward this goal, the HMP has characterized the microbial communities at 18 body habitats in a cohort of over 200 healthy volunteers using 16S rRNA gene (16S sequencing and has generated nearly 1,000 reference genomes from human-associated microorganisms. To determine how well current reference genome collections capture the diversity observed among the healthy microbiome and to guide isolation and future sequencing of microbiome members, we compared the HMP's 16S data sets to several reference 16S collections to create a 'most wanted' list of taxa for sequencing. Our analysis revealed that the diversity of commonly occurring taxa within the HMP cohort microbiome is relatively modest, few novel taxa are represented by these OTUs and many common taxa among HMP volunteers recur across different populations of healthy humans. Taken together, these results suggest that it should be possible to perform whole-genome sequencing on a large fraction of the human microbiome, including the 'most wanted', and that these sequences should serve to support microbiome studies across multiple cohorts. Also, in stark contrast to other taxa, the 'most wanted' organisms are poorly represented among culture collections suggesting that novel culture- and single-cell-based methods will be required to isolate these organisms for sequencing.

  8. Differences among major taxa in the extent of ecological knowledge across four major ecosystems.

    Science.gov (United States)

    Fisher, Rebecca; Knowlton, Nancy; Brainard, Russell E; Caley, M Julian

    2011-01-01

    Existing knowledge shapes our understanding of ecosystems and is critical for ecosystem-based management of the world's natural resources. Typically this knowledge is biased among taxa, with some taxa far better studied than others, but the extent of this bias is poorly known. In conjunction with the publically available World Registry of Marine Species database (WoRMS) and one of the world's premier electronic scientific literature databases (Web of Science®), a text mining approach is used to examine the distribution of existing ecological knowledge among taxa in coral reef, mangrove, seagrass and kelp bed ecosystems. We found that for each of these ecosystems, most research has been limited to a few groups of organisms. While this bias clearly reflects the perceived importance of some taxa as commercially or ecologically valuable, the relative lack of research of other taxonomic groups highlights the problem that some key taxa and associated ecosystem processes they affect may be poorly understood or completely ignored. The approach outlined here could be applied to any type of ecosystem for analyzing previous research effort and identifying knowledge gaps in order to improve ecosystem-based conservation and management.

  9. A Methodology to Model Environmental Preferences of EPT Taxa in the Machangara River Basin (Ecuador

    Directory of Open Access Journals (Sweden)

    Rubén Jerves-Cobo

    2017-03-01

    Full Text Available Rivers have been frequently assessed based on the presence of the Ephemeroptera— Plecoptera—Trichoptera (EPT taxa in order to determine the water quality status and develop conservation programs. This research evaluates the abiotic preferences of three families of the EPT taxa Baetidae, Leptoceridae and Perlidae in the Machangara River Basin located in the southern Andes of Ecuador. With this objective, using generalized linear models (GLMs, we analyzed the relation between the probability of occurrence of these pollution-sensitive macroinvertebrates families and physicochemical water quality conditions. The explanatory variables of the constructed GLMs differed substantially among the taxa, as did the preference range of the common predictors. In total, eight variables had a substantial influence on the outcomes of the three models. For choosing the best predictors of each studied taxa and for evaluation of the accuracy of its models, the Akaike information criterion (AIC was used. The results indicated that the GLMs can be applied to predict either the presence or the absence of the invertebrate taxa and moreover, to clarify the relation to the environmental conditions of the stream. In this manner, these modeling tools can help to determine key variables for river restoration and protection management.

  10. List of Zooplankton Taxa in the Caspian Sea Waters of Iran

    Directory of Open Access Journals (Sweden)

    Siamak Bagheri

    2013-01-01

    Full Text Available A total of 61 zooplankton taxa were found in the southwestern Caspian Sea between 1996 and 2010. Thirteen of them were meroplankton taxa and forty-eight were holoplankton taxa. The occurrence of 14 freshwater taxa indicated the influence of the Anzali wetland and river inflows. The decrease in zooplankton taxa was detected since 1996-1997 and continued till 2010. Pleopis polyphemoides, the only one out of the nine recorded Cladocera species in 1996-1997, was found after 2001. Similarly, of the five Copepoda species recorded in 1996-1997, only one, Acartia tonsa, was found abundant during the 2001–2010 sampling period. It was striking that many species which were abundant in the Caspian Sea in 1996-1997 were not found after 2000. Many reasons could have contributed to the changes in the zooplankton composition of the southern Caspian Sea, notably the serious environmental degradation since the early 1990s. It is also possible that invasive species might play a role in wiping out some sensitive endemic species.

  11. Differences among Major Taxa in the Extent of Ecological Knowledge across Four Major Ecosystems

    Science.gov (United States)

    Fisher, Rebecca; Knowlton, Nancy; Brainard, Russell E.; Caley, M. Julian

    2011-01-01

    Existing knowledge shapes our understanding of ecosystems and is critical for ecosystem-based management of the world's natural resources. Typically this knowledge is biased among taxa, with some taxa far better studied than others, but the extent of this bias is poorly known. In conjunction with the publically available World Registry of Marine Species database (WoRMS) and one of the world's premier electronic scientific literature databases (Web of Science®), a text mining approach is used to examine the distribution of existing ecological knowledge among taxa in coral reef, mangrove, seagrass and kelp bed ecosystems. We found that for each of these ecosystems, most research has been limited to a few groups of organisms. While this bias clearly reflects the perceived importance of some taxa as commercially or ecologically valuable, the relative lack of research of other taxonomic groups highlights the problem that some key taxa and associated ecosystem processes they affect may be poorly understood or completely ignored. The approach outlined here could be applied to any type of ecosystem for analyzing previous research effort and identifying knowledge gaps in order to improve ecosystem-based conservation and management. PMID:22073172

  12. Cerambycidae (Coleoptera da Colômbia: VII. Novos táxons, novos registros, nova sinonímia, nova combinação e novo nome

    Directory of Open Access Journals (Sweden)

    Ubirajara R. Martins

    2005-03-01

    Full Text Available Novos táxons descritos da Colômbia, Amazonas: Xenofrea triangularis sp. nov. (Xenofreini; Boyaca: Neoclytus canescens sp. nov. (Clytini; Epropetes variabile sp. nov. (Tillomorphini; Oreodera advena sp. nov.; Irundisa gen. nov, type species I. ocularis sp. nov. (Acanthoderini; Cauca: Ischiocentra punctata sp. nov. (Onciderini; Caquetá: Oreodera adornata sp. nov. (Acanthoderini; Chocó: Oreodera nivea sp. nov. (Acanthoderini; Magdalena: Mecometopus arixi sp. nov. (Clytini; Nariño: Carterica rubra sp. nov. (Colobotheini; Putumayo: Eburodacrys guttata sp. nov. (Eburiini; Valle del Cauca: Blabia bicolor sp. nov. (Desmiphorini. Novos registros: Colômbia, Amazonas: Criodion cinereum (Olivier, 1795; Coleoxestia atrata (Gounelle, 1909; Eburodacrys quadridens (Fabricius, 1801; E. rufispinis Bates, 1870; E. sulphureosignata (Erichson, 1847; Rhomboidederes minutus Napp & Martins, 1984; Aneuthetochorus conjunctus Napp & Martins, 1984; Lissozodes basalis White, 1855; Mecometopus latecinctus Bates, 1870; Chrysoprasis aureicollis White, 1853; Oreodera curvata Martins & Monné, 1993; Carterica cincticornis Bates, 1865; Magdalena: Atenizus castaneus Martins, 1981; Vichada: Eusapia guyanensis Huedepohl, 1988; Gnomidolon biarcuatum (White, 1855; Tropidion subcruciatum (White, 1855; Sthelenus ichneumoneus Buquet, 1859; Putumayo: Hemilissa opaca Martins, 1976; H. sulcicollis Bates, 1870; Glyptoscapus flaveolus (Bates, 1870; Orthostoma abdominale (Gyllenhal, 1817; Oreodera melzeri Monné & Fragoso, 1988; Caquetá: Gnomidolon conjugatum (White, 1855; Cauca: Mecometopus macilentus Bates, 1872; Tolima: Cherentes niveilateris (Thomson, 1868. Nova sininímia: Necalphus maranduba Galileo &Martins, 2003 = Myoxomorpha decorata Monné & Magno, 1992 e proposta a nova combinação: Necalphus decoratus (Monné & Magno, 1992 comb. nov. Cotyadesmus, novo nome, é dado para Paradesmus Galileo & Martins, 2003 pré-ocupado em Myriapoda.New taxa described from Colombia, Amazonas

  13. Caracterização de novos isolados de Bacillus thuringiensis para o controle de importantes insetos-praga da agricultura

    Directory of Open Access Journals (Sweden)

    Emeline Boni Campanini

    2012-01-01

    Full Text Available A bactéria Bacillus thuringiensis Berliner produz um corpo de inclusão paraesporal (cristal de natureza proteica, formado durante a esporulação, que atua de forma eficiente no controle de insetos-praga de culturas economicamente importantes. Esse cristal é constituído de proteínas Cry, que são codificadas pelos genes cry; um isolado pode ser caracterizado pelo conteúdo de genes cry que apresenta. Visando caracterizar novos isolados no combate de insetos-praga pertencentes às ordens Lepidoptera e Coleoptera, 76 isolados bacterianos foram analisados molecularmente e tiveram seu potencial de controle avaliado por meio de bioensaios com larvas de Spodoptera frugiperda (J.E. Smith, Sphenophorus levis Vaurie e Tenebrio molitor Linnaeus. As análises moleculares indicaram 11 isolados (14,5% da coleção, contendo genes lepidóptero-específicos e 17 (22,37% com genes coleóptero-específicos. As análises de patogenicidade revelaram dois isolados com alto potencial de controle para lagartas de S. frugiperda, um para larvas de S. levis e seis prejudiciais ao desenvolvimento das larvas de T. molitor. Esses isolados de B. thuringiensis podem ser promissores no controle biológico das referidas pragas.

  14. Biophysical characterization of a de novo elastin

    Science.gov (United States)

    Greenland, Kelly Nicole

    Natural human elastin is found in tissue such as the lungs, arteries, and skin. This protein is formed at birth with no mechanism present to repair or supplement the initial quantity formed. As a result, the functionality and durability of elastin's elasticity is critically important. To date, the mechanics of this ability to stretch and recoil is not fully understood. This study utilizes de novo protein design to create a small library of simplistic versions of elastin-like proteins, demonstrate the elastin-like proteins, maintain elastin's functionality, and inquire into its structure using solution nuclear magnetic resonance (NMR). Elastin is formed from cross-linked tropoelastin. Therefore, the first generation of designed proteins consisted of one protein that utilized homogony of interspecies tropoelastin by using three common domains, two hydrophobic and one cross-linking domains. Basic modifications were made to open the hydrophobic region and also to make the protein easier to purify and characterize. The designed protein maintained its functionality, self-aggregating as the temperature increased. Uniquely, the protein remained self-aggregated as the temperature returned below the critical transition temperature. Self-aggregation was additionally induced by increasing salt concentrations and by modifying the pH. The protein appeared to have little secondary structure when studied with solution NMR. These results fueled a second generation of designed elastin-like proteins. This generation contained variations designed to study the cross-linking domain, one specific hydrophobic domain, and the effect of the length of the elastin-like protein. The cross-linking domain in one variation has been significantly modified while the flanking hydrophobic domains have remained unchanged. This characterization of this protein will answer questions regarding the specificity of the homologous nature of the cross-linking domain of tropoelastin across species. A second

  15. A new species of Lioptilodes Zimmerman (Lepidoptera, Pterophoridae from northern Chile Uma nova espécie de Lioptilodes Zimmerman (Lepidoptera, Pterophoridae do norte do Chile

    Directory of Open Access Journals (Sweden)

    Héctor A. Vargas

    2010-01-01

    Full Text Available Male and female adults of a new species of Lioptilodes Zimmerman (Lepidoptera, Pterophoridae are described and illustrated. Immature stages are associated with Baccharis scandens (Ruiz & Pav. Pers. (Asteraceae. The species was collected in two localities of northern Chile: near sea level in the Azapa valley, in the coastal desert of Arica Province and at 3000 m elevation in Socoroma, Parinacota Province.Os adultos macho e fêmea de uma nova espécie de Lioptilodes Zimmerman (Lepidoptera, Pterophoridae são descritos e ilustrados. Os estágios imaturos estão associados com Baccharis scandens (Ruiz & Pav. Pers. (Asteraceae. A espécie foi coletada em duas localidades do norte do Chile: vale de Azapa, perto do nível do mar, no deserto litoral da Província de Arica, e aos 3000 m de altitude em Socoroma, na Província de Parinacota.

  16. Records of mining Lepidoptera in Belgium with nine species new to the country (Nepticulidae, Opostegidae, Tischeriidae, Lyonetiidae)

    NARCIS (Netherlands)

    Nieukerken, van E.J.

    2006-01-01

    Records of 56 species of mining Lepidoptera are given, mostly for Wallonia. Stigmella thuringiaca (Namur: Nismes, on Potentilla tabernaemontani), Ectoedemia arcuatella (Luxembourg, Namur, on Fragaria vesca) and Leucoptera lustratella (Luxembourg, Namur, on Hypericum perforatum) are reported new for

  17. Records of mining Lepidoptera in Belgium with nine species new to the country (Nepticulidae, Opostegidae, Tischeriidae, Lyonetiidae)

    NARCIS (Netherlands)

    Nieukerken, van E.J.

    2006-01-01

    Records of 56 species of mining Lepidoptera are given, mostly for Wallonia. Stigmella thuringiaca (Namur: Nismes, on Potentilla tabernaemontani), Ectoedemia arcuatella (Luxembourg, Namur, on Fragaria vesca) and Leucoptera lustratella (Luxembourg, Namur, on Hypericum perforatum) are reported new for

  18. The effects of strawberry cropping practices on the strawberry tortricid (Lepidoptera: Tortricidae), its naturel enemies, and the presences of nematodes

    DEFF Research Database (Denmark)

    Sigsgaard, Lene; Naulin, Cyril; Haukeland, Solveig

    2014-01-01

    Cropping practice can affect pests and natural enemies. A three-year study of the strawberry tortricid, Acleris comariana (Lienig and Zeller) (Lepidoptera: Tortricidae), its parasitoid Copidosoma aretas Walker (Hymenoptera: Encyrtidae), and its entomopathogenic fungi was conducted in seven pairs...

  19. Combination phenyl propionate/pheromone traps for monitoring navel orangeworm (Lepidoptera: Pyralidae) in almonds in the vicinity of mating disruption

    Science.gov (United States)

    Aerosol mating disruption is used for management of navel orangeworm, Amyelois transitella (Walker) (Lepidoptera: Pyralidae), in an increasing portion of California almonds and pistachios. This formulation suppresses pheromone monitoring traps far beyond the treatment block, potentially complicating...

  20. Geographic Distribution and Conservation of Cyanopepla griseldis (Lepidoptera: Erebidae: Arctiinae: Ctenuchina) an Endemic Wasp Moth of Mexico

    National Research Council Canada - National Science Library

    Fernando Hernández-Baz; Jorge M. González; John B. Heppner

    2014-01-01

    Abstract Mexico contains a large diversity of Lepidoptera (14,385 spp.), but it is a contradiction that only two species of butterflies are officially protected and moths are not even contemplated for protection...

  1. Effect of Maruca vitrata (Lepidoptera: Crambidae) host plants on life-history parameters of the parasitoid Apanteles taragamae (Hymenoptera: Braconidae)

    NARCIS (Netherlands)

    Dannon, A.E.; Tamo, M.; Agboton, C.; Huis, van A.; Dicke, M.

    2012-01-01

    The effect of four host plant species of the herbivore Maruca vitrata Fabricius (Lepidoptera: Crambidae) on development time, longevity, fecundity and sex ratio of the parasitoid Apanteles taragamae Viereck (Hymenoptera: Braconidae) was investigated under laboratory conditions. The larvae were

  2. Novor: real-time peptide de novo sequencing software.

    Science.gov (United States)

    Ma, Bin

    2015-11-01

    De novo sequencing software has been widely used in proteomics to sequence new peptides from tandem mass spectrometry data. This study presents a new software tool, Novor, to greatly improve both the speed and accuracy of today's peptide de novo sequencing analyses. To improve the accuracy, Novor's scoring functions are based on two large decision trees built from a peptide spectral library with more than 300,000 spectra with machine learning. Important knowledge about peptide fragmentation is extracted automatically from the library and incorporated into the scoring functions. The decision tree model also enables efficient score calculation and contributes to the speed improvement. To further improve the speed, a two-stage algorithmic approach, namely dynamic programming and refinement, is used. The software program was also carefully optimized. On the testing datasets, Novor sequenced 7%-37% more correct residues than the state-of-the-art de novo sequencing tool, PEAKS, while being an order of magnitude faster. Novor can de novo sequence more than 300 MS/MS spectra per second on a laptop computer. The speed surpasses the acquisition speed of today's mass spectrometer and, therefore, opens a new possibility to de novo sequence in real time while the spectrometer is acquiring the spectral data. Graphical Abstract ᅟ.

  3. De Novo Coding Variants Are Strongly Associated with Tourette Disorder.

    Science.gov (United States)

    Willsey, A Jeremy; Fernandez, Thomas V; Yu, Dongmei; King, Robert A; Dietrich, Andrea; Xing, Jinchuan; Sanders, Stephan J; Mandell, Jeffrey D; Huang, Alden Y; Richer, Petra; Smith, Louw; Dong, Shan; Samocha, Kaitlin E; Neale, Benjamin M; Coppola, Giovanni; Mathews, Carol A; Tischfield, Jay A; Scharf, Jeremiah M; State, Matthew W; Heiman, Gary A

    2017-05-03

    Whole-exome sequencing (WES) and de novo variant detection have proven a powerful approach to gene discovery in complex neurodevelopmental disorders. We have completed WES of 325 Tourette disorder trios from the Tourette International Collaborative Genetics cohort and a replication sample of 186 trios from the Tourette Syndrome Association International Consortium on Genetics (511 total). We observe strong and consistent evidence for the contribution of de novo likely gene-disrupting (LGD) variants (rate ratio [RR] 2.32, p = 0.002). Additionally, de novo damaging variants (LGD and probably damaging missense) are overrepresented in probands (RR 1.37, p = 0.003). We identify four likely risk genes with multiple de novo damaging variants in unrelated probands: WWC1 (WW and C2 domain containing 1), CELSR3 (Cadherin EGF LAG seven-pass G-type receptor 3), NIPBL (Nipped-B-like), and FN1 (fibronectin 1). Overall, we estimate that de novo damaging variants in approximately 400 genes contribute risk in 12% of clinical cases. VIDEO ABSTRACT. Copyright © 2017 Elsevier Inc. All rights reserved.

  4. Novor: Real-Time Peptide de Novo Sequencing Software

    Science.gov (United States)

    Ma, Bin

    2015-11-01

    De novo sequencing software has been widely used in proteomics to sequence new peptides from tandem mass spectrometry data. This study presents a new software tool, Novor, to greatly improve both the speed and accuracy of today's peptide de novo sequencing analyses. To improve the accuracy, Novor's scoring functions are based on two large decision trees built from a peptide spectral library with more than 300,000 spectra with machine learning. Important knowledge about peptide fragmentation is extracted automatically from the library and incorporated into the scoring functions. The decision tree model also enables efficient score calculation and contributes to the speed improvement. To further improve the speed, a two-stage algorithmic approach, namely dynamic programming and refinement, is used. The software program was also carefully optimized. On the testing datasets, Novor sequenced 7%-37% more correct residues than the state-of-the-art de novo sequencing tool, PEAKS, while being an order of magnitude faster. Novor can de novo sequence more than 300 MS/MS spectra per second on a laptop computer. The speed surpasses the acquisition speed of today's mass spectrometer and, therefore, opens a new possibility to de novo sequence in real time while the spectrometer is acquiring the spectral data.

  5. Contribution to the diatom flora of Cambodia: Five new recent freshwater taxa

    Institute of Scientific and Technical Information of China (English)

    Saúl BLANCO; Irene (A)LVAREZ-BLANCO; Cristina CEJUDO-FIGUEIRAS; Eloy B(E)CARES

    2012-01-01

    Cambodian aquatic ecosystems are extremely diversified and constitute major preservation targets.However,the species composition,diversity,and distribution of the inhabiting algal communities are largely unknown.During a sample collection carried out in the Angkor and Banteay Srei monuments area in 2010,several unknown diatom taxa were found in various population densities in the artificial lakes surrounding these temples.Detailed light and scanning electron microscopy observations allowed the description of five of them (Pinnularia cambodiana,P.shivae,Gomphonema angkoricum,G.paradaphnoides,and Frustulia lacus-templi) as taxa new to science.Differential diagnostic criteria with respect to similar taxa,together with the ecological and environmental implications of these findings,are briefly discussed.

  6. Pollen-climate response surfaces of selected taxa from Northern China

    Institute of Scientific and Technical Information of China (English)

    孙湘君; 王琫瑜; 宋长青

    1996-01-01

    Pollen-climate response surfaces of major taxa from surface pollen data of Northern China is studied. Response surfaces are nonlinear functions that describe the way in which each taxon’s expected abundance (the response variables) depends on the combined effects of several environmental variables(prediction variables). Response surfaces for 8 major taxa--Pinus, Picea, Betuta, Artemisia, Ephedra,Chenopodiaceae, Asteraceae and Poaceae--from 215 surface pollen samples and related climatic data(mean July temperature and annual precipitation) have been generated by analysis of second- or third-degree polynomial regression. Surface samples were collected from surface soil under natural vegetation of Northern China. The results can be used to re-evaluate the ecological significance of abundances of some taxa by quantifying the paleoclimatic variables from fossil pollen abundances.

  7. Analysis of Starch Grains Produced in Select Taxa Encountered in Southwest Asia

    Directory of Open Access Journals (Sweden)

    Thomas C. Hart

    2014-12-01

    Full Text Available Starch grain analysis is a rapidly growing field of research in Southwest Asia and is beginning to be applied to many different time periods. However, much work still remains regarding which taxa produce starch grains that can be identified archaeologically. In this paper, I centralize what is known about starch production patterns within regional flora and analyze 64 previously unstudied taxa from 22 families. The results of this study demonstrate that descriptions of starch grains from Southwest Asian taxa are scattered between archaeological and plant and food science publications. Ten of the species examined in this study, most of whom are grasses, produced starch grains that can be identified at varying taxonomic levels.

  8. COMPARATIVE BIOCHEMICAL AND PHYSIOLOGICAL RESEARCH ON TAXA OF MENTHA L. GENUS

    Directory of Open Access Journals (Sweden)

    ZAMFIRACHE MARIA-MAGDALENA

    2011-12-01

    Full Text Available The Mentha L. genus has many aromatic and medicinal taxa with a large area in our country. These taxa prefer flooded, swampy areas and wetlands, but they can also grow in moderate dry areas. Biochemical characteristics were obtained for 7 taxa from Mentha L. genus, wild or cultivated plants. The studies concerning the assimilative pigments, the hydric content, and the dry matter were determined for each vegetation stage. We used the gravimetric method for the hydric content and dry matter and the spectrophotometric method for estimation of the assimilative pigments. The results of the experiments are not the same for each taxon because of different harvesting periods and the ecological conditions of each taxon area.

  9. Timing and patterns in the taxonomic diversification of Lepidoptera (butterflies and moths.

    Directory of Open Access Journals (Sweden)

    Niklas Wahlberg

    Full Text Available The macroevolutionary history of the megadiverse insect order Lepidoptera remains little-known, yet coevolutionary dynamics with their angiospermous host plants are thought to have influenced their diversification significantly. We estimate the divergence times of all higher-level lineages of Lepidoptera, including most extant families. We find that the diversification of major lineages in Lepidoptera are approximately equal in age to the crown group of angiosperms and that there appear to have been three significant increases in diversification rates among Lepidoptera over evolutionary time: 1 at the origin of the crown group of Ditrysia about 150 million years ago (mya, 2 at the origin of the stem group of Apoditrysia about 120 mya and finally 3 a spectacular increase at the origin of the stem group of the quadrifid noctuoids about 70 mya. In addition, there appears to be a significant increase in diversification rate in multiple lineages around 90 mya, which is concordant with the radiation of angiosperms. Almost all extant families appear to have begun diversifying soon after the Cretaceous/Paleogene event 65.51 mya.

  10. Post-glacial dispersal strategies of Orthoptera and Lepidoptera in Europe and in the Carpathian basin

    NARCIS (Netherlands)

    Varga, Z.

    2003-01-01

    Post-glacial dispersal strategies of Orthoptera and Lepidoptera in Europe and in the Carpathian basin Ecologically transitional regions are characterised by high species diversity due to the overlap of species with different geographical origins caused by dispersal processes along gradients, e.g.

  11. The first record of the butterfly Memphis d. dia(Lepidoptera: Nymphalidae, Charaxinae in Costa Rica

    Directory of Open Access Journals (Sweden)

    Jim Córdoba-Alfaro

    2013-06-01

    Full Text Available The presence of Memphis diain Costa Rica (Godman & Salvin, 1884 (Lepidoptera: Nymphalidae, Charaxinae is reported herein, based on a specimen collected El Rodeo (09 ° 54’ 76.6”N; 84 ° 16’ 89.5”W on April 4, 2012.

  12. Extrafloral nectar feeding by Strymon jacqueline Nicolay & Robbins, 2005 (Lepidoptera: Lycaenidae: Eumaeini

    Directory of Open Access Journals (Sweden)

    Roger Vila

    2006-10-01

    Full Text Available Adults of the dry area specialist Strymon jacqueline Nicolay & Robbins, 2005 (Lepidoptera: Lycaenidae: Eumaeini are here recorded feeding on extrafloral nectar of the large cactus Neoraimondia arequipensis var. gigantea (Werdermann & Backeberg Ritter. The significance of these observations is discussed in relation to lycaenid survival in a xeric environment, pollination and mate location.

  13. Lepidoptera (moths and butterflies) thrived in gymnosperm forests following the end-Triassic extinction

    Science.gov (United States)

    van de Schootbrugge, Bas; van Eldijk, Timo; Wappler, Torsten; Strother, Paul; van der Weijst, Carolien; Rajaei, Hossein; Visscher, Henk

    2017-04-01

    The oldest evidence for Lepidoptera (moths and butterflies) and the Coelolepida (hollow-scaled moths and butterflies) is presented based on an assemblage of fossilized scales encountered in uppermost Triassic and lowermost Jurassic sediments from a core drilled in northern Germany. The diverse assemblage of scales points to a Triassic origin of the Lepidoptera and a radiation of some lineages just before or right after the end-Triassic mass extinction (201 Ma). These findings confirm molecular clock estimates for splits within the Amphiesmenoptera that led to the evolution of true butterflies. Not only did Lepidoptera survive the end-Triassic extinction, they also appear to have radiated directly following this environmental crisis, which could be related to the dramatic changes in paleoclimate triggered by the eruption of the CAMP, especially an increase in humidity. Seen in combination with high-resolution palynological records that show an Early Jurassic dominance of conifer pollen, the presence of scales derived from angiospermivorous Coelolepida likely signifies a host-shift (for multiple lineages of crown group Lepidoptera) from gymnosperms to angiosperms during the Mesozoic.

  14. Seasonal infestations of two stem borers (Lepidoptera: Crambidae) in noncrop grasses of Gulf Coast rice agroecosystems

    Science.gov (United States)

    Infestations of two stem borers, the Mexican rice borer, Eoreuma loftini (Dyar) and the sugarcane borer, Diatraea saccharalis (F.) (Lepidoptera: Crambidae), were compared in non-crop grasses adjacent to rice, Oryza sativa L., fields. Three farms in the Texas Gulf Coast rice production area were sur...

  15. A new species of the genus Acria Stephens, 1834 (Lepidoptera: Depressariidae: Acriinae) from India.

    Science.gov (United States)

    Shashank, P R; Saravanan, L; Kalidas, P; Phanikumar, T; Ramamurthy, V V; Chandra Bose, N S

    2015-05-14

    A new species, Acria meyricki sp. nov. (Lepidoptera: Depressariidae: Acriinae) occurring on oil palm, is described from India. The status and nomenclature of the genus is reviewed and an annotated checklist of species is given. A key to the seven species known so far from the Indian subcontinent is provided.

  16. Modeling evolution of resistance of sugarcane borer (Lepidoptera: Crambidae) to transgenic Bt corn

    NARCIS (Netherlands)

    Kang, J.; Huang, F.; Onstad, D. W.

    2014-01-01

    Diatraea saccharalis (F.) (Lepidoptera: Crambidae) is a target pest of transgenic corn expressing Bacillus thuringiensis (Bt) protein, and the first evidence of resistance by D. saccharalis to Cry1Ab corn was detected in a field population in northeast Louisiana in 2004. We used a model of populatio

  17. Sighting of Elymnias panthera (Lepidoptera: Nymphalidae: Satyrinae in West Bengal, eastern India

    Directory of Open Access Journals (Sweden)

    A.B. Roy

    2010-01-01

    Full Text Available The Tawny Palmfly butterfly, Elymnias panthera (Lepidoptera: Nymphalidae: Satyrinae, is a Malayan species that is also known from the Nicobar Islands. Here we report sighting of E. panthera from the Bethuadahari Wildlife Sanctuary in West Bengal, eastern India. This is the first sighting of the species from mainland India, and is a possible range extension of the species into northeastern India.

  18. RNA interference in Lepidoptera: an overview of successful and unsuccessful studies and implications for experimental design

    NARCIS (Netherlands)

    Terenius, O.; Papanicolaou, A.; Garbutt, J.S.; Eleftherianos, I.; Huvenne, H.; Kanginakudru, S.; Albrechtsen, M.; An, C.; Aymeric, J.L.; Barthel, A.; Bebas, P.; Bitra, K.; Bravo, A.; Chevalier, F.; Collinge, D.P.; Crava, C.M.; de Maagd, R.A.; Duvic, B.; Erlandson, M.; Faye, I.; Felföldi, G.; Fujiwara, H.; Futahashi, R.; Gandhe, A.S.; Gatehouse, H.S.; Gatehouse, L.N.; Giebultowicz, J.M.; Gómez, I.; Grimmelikhuijzen, C.J.P.; Groot, A.T.; Hauser, F.; Heckel, D.G.; Hegedus, D.D.; Hrycaj, S.; Huang, L.; Hull, J.J.; Iatrou, G.; Iga, M.; Kanost, M.R.; Kotwica, J.; Li, C.; Li, J.H.; Liu, J.S.; Lundmark, M.; Matsumoto, S.; Meyering-Vos, M.; Millichap, P.J.; Monteiro, A.; Mrinal, N.; Niimi, T; Nowara, D.; Ohnishi, A.; Oostra, V.; Ozaki, K.; Papakonstantinou, M.; Popadic, A.; Rajam, M.V.; Saenko, S.; Simpson, R.M.; Soberón, M.; Strand, M.R.; Tomita, S.; Toprak, U.; Wang, P.; Wee, C.W.; Whyard, S.; Zhang, W.; Nagaraju, J.; Ffrench-Constant, R.H.; Herrero, S.; Gordon, K.; Smagghe, G.

    2012-01-01

    Gene silencing through RNA interference (RNAi) has revolutionized the study of gene function, particularly in non-model insects. However, in Lepidoptera (moths and butterflies) RNAi has many times proven to be difficult to achieve. Most of the negative results have been anecdotal and the positive ex

  19. Aggregation and foraging behavior of imported cabbageworm (Lepidoptera: pieridae) adults on blue vervain flowers

    Science.gov (United States)

    The imported cabbageworm [Pieris rapae (L.) (Lepidoptera: Pieridae)], also known as the cabbage white butterfly, is an important specialized pest on cruciferous plants (Brassicales: Brassicaceae) worldwide. an unusual aggregation of the cabbage white butterflies was observed on a patch of flowering...

  20. Digestive peptidase evolution in holometabolous insects led to a divergent group of enzymes in Lepidoptera.

    Science.gov (United States)

    Dias, Renata O; Via, Allegra; Brandão, Marcelo M; Tramontano, Anna; Silva-Filho, Marcio C

    2015-03-01

    Trypsins and chymotrypsins are well-studied serine peptidases that cleave peptide bonds at the carboxyl side of basic and hydrophobic L-amino acids, respectively. These enzymes are largely responsible for the digestion of proteins. Three primary processes regulate the activity of these peptidases: secretion, precursor (zymogen) activation and substrate-binding site recognition. Here, we present a detailed phylogenetic analysis of trypsins and chymotrypsins in three orders of holometabolous insects and reveal divergent characteristics of Lepidoptera enzymes in comparison with those of Coleoptera and Diptera. In particular, trypsin subsite S1 was more hydrophilic in Lepidoptera than in Coleoptera and Diptera, whereas subsites S2-S4 were more hydrophobic, suggesting different substrate preferences. Furthermore, Lepidoptera displayed a lineage-specific trypsin group belonging only to the Noctuidae family. Evidence for facilitated trypsin auto-activation events were also observed in all the insect orders studied, with the characteristic zymogen activation motif complementary to the trypsin active site. In contrast, insect chymotrypsins did not seem to have a peculiar evolutionary history with respect to their mammal counterparts. Overall, our findings suggest that the need for fast digestion allowed holometabolous insects to evolve divergent groups of peptidases with high auto-activation rates, and highlight that the evolution of trypsins led to a most diverse group of enzymes in Lepidoptera.

  1. Fund af småsommerfugle fra Danmark i 2009 (Lepidoptera)

    DEFF Research Database (Denmark)

    Buhl, Otto; Falck, Per; Karsholt, Ole

    2010-01-01

    ; Coleophoridae 118; Tortricidae 383 and of Pyralidae 196; this results in a total of 1560 species of Microlepidoptera (families Micropterigidae-Pyralidae) found in Denmark. The total amount of Macrolepidoptera mentioned from Denmark is now 962, bringing the number of Danish Lepidoptera to a total of 2522 species....

  2. Host range of Caloptilia triadicae (Lepidoptera: Gracillariidae): an adventive herbivore of Chinese tallowtree (Malpighiales: Euphorbiaceae)

    Science.gov (United States)

    In its native range the invasive weed, Rhodomyrtus tomentosa is host to a suite of herbivores. One, Strepsicrates sp. (Lepidoptera: Tortricidae) was collected in China in 2014, introduced under quarantine in Florida, USA and tested against related species to determine its host range and suitability ...

  3. Fund af småsommerfugle fra Danmark i 2010 (Lepidoptera)

    DEFF Research Database (Denmark)

    Buhl, Otto; Falck, Per; Karsholt, Ole

    2011-01-01

    ; Tortricidae 384; Epermeniidae 7; Pterophoridae 46 and Pyralidae 197; this results in a total of 1574 species of Microlepidoptera (families Micropterigidae-Pyralidae) found in Denmark. The total amount of Macrolepidoptera mentioned from Denmark is now 965, bringing the number of Danish Lepidoptera to a total...

  4. Host plant associated genetic divergence of two Diatraea spp. (Lepidoptera: Crambidae) stemborers on novel crop plants

    Science.gov (United States)

    Diatraea lineolata and Diatraea saccharalis (Lepidoptera: Crambidae) are moths with stemboring larvae that feed and develop on economically important grasses. This study investigated whether these moths have diverged from a native host plant, corn, onto introduced crop plants including sorghum, suga...

  5. Effects of elevated CO2 leaf diet on gypsy moth (Lepidoptera: Lymantriidae) respiration rates

    Science.gov (United States)

    Anita R. Foss; William J. Mattson; Terry M. Trier

    2013-01-01

    Elevated levels of CO2 affect plant growth and leaf chemistry, which in turn can alter host plant suitability for insect herbivores. We examined the suitability of foliage from trees grown from seedlings since 1997 at Aspen FACE as diet for the gypsy moth (Lymantria dispar L.) Lepidoptera: Lymantriidae: paper birch (...

  6. Reproduction, longevity and survival of the cactus moth, Cactoblastis cactorum (Lepidoptera: Pyralidae).

    Science.gov (United States)

    Screened potted cactus plants (Opuntia ficus-indica (L.) Mill.) containing pairs of adult male and female cactus moths, Cactoblastis cactorum (Berg) (Lepidoptera: Pyralidae), were placed in a cactus field in St. Marks, Florida to measure oviposition patterns under field-realistic conditions. Results...

  7. Post-glacial dispersal strategies of Orthoptera and Lepidoptera in Europe and in the Carpathian basin

    NARCIS (Netherlands)

    Varga, Z.

    2003-01-01

    Post-glacial dispersal strategies of Orthoptera and Lepidoptera in Europe and in the Carpathian basin Ecologically transitional regions are characterised by high species diversity due to the overlap of species with different geographical origins caused by dispersal processes along gradients, e.g. th

  8. Fund af småsommerfugle fra Danmark i 2012 (Lepidoptera)

    DEFF Research Database (Denmark)

    Buhl, Otto; Falck, Per; Karsholt, Ole

    2013-01-01

    traps in Born holm. We more over trans fer Caloptilia azaleella (Brants, 1913) (Gra cil lariidae) from the ob ser va tion list to the main list of Dan ish Lepidoptera. The to tal num ber of Dan ish Gracillariidae is now 88, Gelechiidae 178 and of Tortricidae 389. This re sults in a to tal of 1587 spe...

  9. Sighting of Elymnias panthera (Lepidoptera: Nymphalidae: Satyrinae in West Bengal, eastern India

    Directory of Open Access Journals (Sweden)

    A.B. Roy

    2010-01-01

    Full Text Available The Tawny Palmfly butterfly, Elymnias panthera (Lepidoptera: Nymphalidae: Satyrinae, is a Malayan species that is also known from the Nicobar Islands. Here we report sighting of E. panthera from the Bethuadahari Wildlife Sanctuary in West Bengal, eastern India. This is the first sighting of the species from mainland India, and is a possible range extension of the species into northeastern India.

  10. Before harvest survival of codling moth (Lepidoptera: Tortricidae) in artificially infested sweet cherries

    Science.gov (United States)

    Prior to the 2009 season, sweet cherries, Prunus avium (L.) L., from North America were required to be fumigated with methyl bromide before being exported to Japan to eliminate possible infestation by codling moth, Cydia pomonella (L.) (Lepidoptera: Tortricidae). However, based on recent biological...

  11. Digestive peptidase evolution in holometabolous insects led to a divergent group of enzymes in Lepidoptera

    KAUST Repository

    Dias, Renata O.

    2015-03-01

    © 2015 Elsevier Ltd. Trypsins and chymotrypsins are well-studied serine peptidases that cleave peptide bonds at the carboxyl side of basic and hydrophobic l-amino acids, respectively. These enzymes are largely responsible for the digestion of proteins. Three primary processes regulate the activity of these peptidases: secretion, precursor (zymogen) activation and substrate-binding site recognition. Here, we present a detailed phylogenetic analysis of trypsins and chymotrypsins in three orders of holometabolous insects and reveal divergent characteristics of Lepidoptera enzymes in comparison with those of Coleoptera and Diptera. In particular, trypsin subsite S1 was more hydrophilic in Lepidoptera than in Coleoptera and Diptera, whereas subsites S2-S4 were more hydrophobic, suggesting different substrate preferences. Furthermore, Lepidoptera displayed a lineage-specific trypsin group belonging only to the Noctuidae family. Evidence for facilitated trypsin auto-activation events were also observed in all the insect orders studied, with the characteristic zymogen activation motif complementary to the trypsin active site. In contrast, insect chymotrypsins did not seem to have a peculiar evolutionary history with respect to their mammal counterparts. Overall, our findings suggest that the need for fast digestion allowed holometabolous insects to evolve divergent groups of peptidases with high auto-activation rates, and highlight that the evolution of trypsins led to a most diverse group of enzymes in Lepidoptera.

  12. THYMELICUS LINEOLA IN SARDEGNA, SPECIE INDIGENA MISCONOSCIUTA O RECENTE INTRODUZIONE ANTROPICA? (Lepidoptera, Hesperiidae

    Directory of Open Access Journals (Sweden)

    Mario Doneddu

    2011-04-01

    Full Text Available Si riporta la presenza di Thymelicus lineola (Ochsenheimer, 1808 (Lepidoptera, Hesperiidae in Sardegna e si discute della sua possibile appartenenza alla fauna autoctona o in alternativa delle modalità con le quali abbia raggiunto l’isola.

  13. Cucullia umbratica (Lepidoptera, Noctuidae, a new European noctuid in North America

    Directory of Open Access Journals (Sweden)

    Louis Handfield

    2010-03-01

    Full Text Available The discovery of a noctuid new for North America, Cucullia umbratica (Linnaeus, 1758 (Lepidoptera: Noctuidae, is reported from the Magdalen Islands (Quebec, Canada. A male and a female from the Islands are illustrated as well as specimens of the superficially similar species Cucullia intermedia Speyer, 1870. The male genitalia of both species are illustrated.

  14. Benefits to poorly studied taxa of conservation of bird and mammal diversity on islands.

    Science.gov (United States)

    Aslan, Clare; Holmes, Nick; Tershy, Bernie; Spatz, Dena; Croll, Donald A

    2015-02-01

    Protected area delineation and conservation action are urgently needed on marine islands, but the potential biodiversity benefits of these activities can be difficult to assess due to lack of species diversity information for lesser known taxa. We used linear mixed effects modeling and simple spatial analyses to investigate whether conservation activities based on the diversity of well-known insular taxa (birds and mammals) are likely to also capture the diversity of lesser known taxa (reptiles, amphibians, vascular land plants, ants, land snails, butterflies, and tenebrionid beetles). We assembled total, threatened, and endemic diversity data for both well-known and lesser known taxa and combined these with physical island biogeography characteristics for 1190 islands from 109 archipelagos. Among physical island biogeography factors, island area was the best indicator of diversity of both well-known and little-known taxa. Among taxonomic factors, total mammal species richness was the best indicator of total diversity of lesser known taxa, and the combination of threatened mammal and threatened bird diversity was the best indicator of lesser known endemic richness. The results of other intertaxon diversity comparisons were highly variable, however. Based on our results, we suggest that protecting islands above a certain minimum threshold area may be the most efficient use of conservation resources. For example, using our island database, if the threshold were set at 10 km(2) and the smallest 10% of islands greater than this threshold were protected, 119 islands would be protected. The islands would range in size from 10 to 29 km(2) and would include 268 lesser known species endemic to a single island, along with 11 bird and mammal species endemic to a single island. Our results suggest that for islands of equivalent size, prioritization based on total or threatened bird and mammal diversity may also capture opportunities to protect lesser known species endemic to

  15. Biology and control of the raspberry crown borer (Lepidoptera: Sesiidae).

    Science.gov (United States)

    McKern, Jacquelyn A; Johnson, Donn T; Lewis, Barbara A

    2007-04-01

    This study explored the biology of raspberry crown borer, Pennisetia marginata (Harris) (Lepidoptera: Sesiidae), in Arkansas and the optimum timing for insecticide and nematode applications. The duration of P. marginata's life cycle was observed to be 1 yr in Arkansas. Insecticide trials revealed that bifenthrin, chlorpyrifos, imidacloprid, metaflumizone, and metofluthrin efficacy were comparable with that of azinphosmethyl, the only labeled insecticide for P. marginata in brambles until 2005. Applications on 23 October 2003 for plots treated with bifenthrin, chlorpyrifos, and azinphosmethyl resulted in >88% reduction in larvae per crown. Applications on 3 November 2004 of metaflumizone, metofluthrin, and bifenthrin resulted in >89% reduction in larvae per crown. Applications on 7 April 2005 for metofluthrin, imidacloprid, bifenthrin, metaflumizone, and benzoylphenyl urea resulted in >64% reduction in the number of larvae per crown. Applications on 6 May 2004 did not reduce larval numbers. The optimum timing for treatments was found to be between October and early April, before the larvae tunneled into the crowns of plants. Applying bifenthrin with as little as 468 liters water/ha (50 gal/acre) was found to be as effective against larvae as higher volumes of spray. Nematode applications were less successful than insecticides. Nematode applications of Steinernemafeltiae, Steinernema carpocapsae, and Heterorhabditis bacteriophora reduced larvae counts per plant by 46, 53, and 33%, respectively.

  16. The complete mitochondrial genome of Callerebia suroia (Lepidoptera: Nymphalidae: Satyrinae).

    Science.gov (United States)

    Shi, Qinghui; Zhang, Wei; Hao, Jiasheng

    2016-01-01

    The complete mitochondrial genome (mitogenome) of Callerebia suroia (Lepidoptera: Nymphalidae: Satyrinae) was determined and analyzed in this paper. The circular genome is 15,208 bp long, including 37 typical mitochondrial genes and one non-coding AT-rich region. All protein-coding genes (PCGs) started with ATN, except for COI gene with CGA(R), which is often found in other butterflies; nine PCGs harbor the typical stop codon TAA, whereas COI, COII, ND5 and ND4 end with a single T. All tRNA genes display typical secondary clover-leaf structures, except for tRNA(Ser)(AGN), whose dihydrouridine (DHU) arm is replaced by a simple loop. The lrRNA and srRNA genes are 1,347 bp and 753 bp in length, with their AT contents of 84.4% and 85.4%, respectively. The 417 bp AT-rich region contains non repetitive sequences, but harbor several features common to the lepidopterans, including the motif ATAGA followed by a 19-bp poly-T stretch and a microsatellite-like (TA)8 element preceded by the ATTTA motif.

  17. Geographic differences and sexual dimorphism in Greta cubana (Lepidoptera: Nymphalidae

    Directory of Open Access Journals (Sweden)

    Liz Marrero

    2013-09-01

    Full Text Available Greta cubana (Lepidoptera: Nymphalidae presents populations in central and Eastern mountainous regions of Cuba, which are stables habitats that have been isolated for a long period of time. This study evaluates the geographic variation and the sexual dimorphism of this species using geometric morphometric tools,with 91 individuals of four populations: Topes de Collantes (n=5, Pico Turquino (n=26, Loma del Gato (n=27 and Gran Piedra (n=33. For each specimen was calculated its centroid size, wing´s total area and white spots´s relative areas. These variables were compared between sex and populations using Mann-Whitney´s U and Kruskal-Wallis tests, respectively. Discriminant and relative warps analyses were applied to weight matrices to separate between sex and populations. There were not significant differences between males and females wing size, but we found differences in spots size. The analyses applied to weight matrices separated males and females successfully. When analysing geographic variation of forewing area, only significant differences among females from Topes de Collantes and Pico Turquino populations were found. Centroid size and white spots didn’t have significant difference between populations. Both males and females show differences in shape wings between populations. We found clear evidences of sexual dimorphism, nevertheless not geographic differences exist. We are still supporting G. cubana as a monotypic species.

  18. Micropyle number is associated with elevated female promiscuity in Lepidoptera.

    Science.gov (United States)

    Iossa, Graziella; Gage, Matthew J G; Eady, Paul E

    2016-12-01

    In the majority of insects, sperm fertilize the egg via a narrow canal through the outer chorion called the micropyle. Despite having this one primary function, there is considerable unexplained variation in the location, arrangement and number of micropyles within and between species. Here, we examined the relationship between micropyle number and female mating pattern through a comparative analysis across Lepidoptera. Three functional hypotheses could explain profound micropylar variation: (i) increasing micropyle number reduces the risk of infertility through sperm limitation in species that mate infrequently; (ii) decreasing micropyle number reduces the risk of pathological polyspermy in species that mate more frequently; and (iii) increasing micropyle number allows females to exert greater control over fertilization within the context of post-copulatory sexual selection, which will be more intense in promiscuous species. Micropyle number was positively related to the degree of female promiscuity as measured by spermatophore count, regardless of phylogenetic signal, supporting the hypothesis that micropyle number is shaped by post-copulatory sexual selection. We discuss this finding in the context of cryptic female choice, sperm limitation and physiological polyspermy.

  19. [Origin of Lepidoptera fauna of the Southern Transural region].

    Science.gov (United States)

    Utkin, N A

    2000-01-01

    The butterfly fauna of the Southern Transural region began mainly through the migration of insects from the Urals and Kazakhstan, since the end of the Cretaceous Period to the end of Paleogen, the Transural region was covered by an epiplatform sea. As this sea was retreating, the first regions of dry land appeared, which had boundaries with Kazakhstan and the Urals. They were the first to be populated by Lepidoptera. During the Pleocene and then after the Pleistocene cooling events, insects settled generally along the valley of the Tobol River and the Turgai depression, because these territories belong to intrazonal elements. At the present time, the greatest species diversity among insects in the southern Transural area is observed specifically in the Turgai depression and in areas directly adjacent to it. This territory is mainly occupied by populations unique to the Transural regions and belonging to the following species: Mantis religiosa (praying mantis), Saga pedo, Parnassius apollo (apollo), Neolycaena rhymnus, Hyponephele lupina (oriental meadow brown), Chazara persephone (dark rockbrown), Epicallia villica (cream-spot tiger), etc.

  20. DNA barcodes identify Central Asian Colias butterflies (Lepidoptera, Pieridae)

    Science.gov (United States)

    Laiho, Juha; Ståhls, Gunilla

    2013-01-01

    Abstract A majority of the known Colias species (Lepidoptera: Pieridae, Coliadinae) occur in the mountainous regions of Central-Asia, vast areas that are hard to access, rendering the knowledge of many species limited due to the lack of extensive sampling. Two gene regions, the mitochondrial COI ‘barcode’ region and the nuclear ribosomal protein RpS2 gene region were used for exploring the utility of these DNA markers for species identification. A comprehensive sampling of COI barcodes for Central Asian Colias butterflies showed that the barcodes facilitated identification of most of the included species. Phylogenetic reconstruction based on parsimony and Neighbour-Joining recovered most species as monophyletic entities. For the RpS2 gene region species-specific sequences were registered for some of the included Colias spp. Nevertheless, this gene region was not deemed useful as additional molecular ‘barcode’. A parsimony analysis of the combined COI and RpS2 data did not support the current subgeneric classification based on morphological characteristics. PMID:24453557

  1. Influence of killing method on Lepidoptera DNA barcode recovery.

    Science.gov (United States)

    Willows-Munro, Sandi; Schoeman, M Corrie

    2015-05-01

    The global DNA barcoding initiative has revolutionized the field of biodiversity research. Such large-scale sequencing projects require the collection of large numbers of specimens, which need to be killed and preserved in a way that is both DNA-friendly and which will keep voucher specimens in good condition for later study. Factors such as time since collection, correct storage (exposure to free water and heat) and DNA extraction protocol are known to play a role in the success of downstream molecular applications. Limited data are available on the most efficient, DNA-friendly protocol for killing. In this study, we evaluate the quality of DNA barcode (cytochrome oxidase I) sequences amplified from DNA extracted from specimens collected using three different killing methods (ethyl acetate, cyanide and freezing). Previous studies have suggested that chemicals, such as ethyl acetate and formaldehyde, degraded DNA and as such may not be appropriate for the collection of insects for DNA-based research. All Lepidoptera collected produced DNA barcodes of good quality, and our study found no clear difference in nucleotide signal strength, probability of incorrect base calling and phylogenetic utility among the three different treatment groups. Our findings suggest that ethyl acetate, cyanide and freezing can all be used to collect specimens for DNA analysis.

  2. The complete mitochondrial genome of Triphysa phryne (Lepidoptera: Nymphalidae: Satyrinae).

    Science.gov (United States)

    Zhang, Wei; Gan, Shanshan; Zuo, Ni; Chen, Chunhui; Wang, Ying; Hao, Jiasheng

    2016-01-01

    The complete mitochondrial genome (mitogenome) sequence of Triphysa phryne (Lepidoptera: Nymphalidae: Satyrinae) was determined in this study. The mitogenome is 15,143 bp in length, containing 37 typical animal mitochondrial genes: 13 putative protein-coding genes (PCGs), 2 ribosomal RNAs, 22 transfer RNAs and a non-coding AT-rich region. Its gene content and order are identical to those of other lepidopteran mitogenomes. All protein-coding genes (PCGs) are initiated by ATN codons, except for COI gene which uses CGA as its start codon. Nine PCGs terminate in the common stop TAA, whereas the COI, COII, ND5 and ND4 genes end with single T. All tRNA genes showed typical secondary cloverleaf structures except for the tRNA(Ser)(AGN), which has a simple loop with the absence of its DHU stem. The 316 bp AT-rich region contains several features common to the other lepidopterans, such as the motif ATAGA followed by an 19-bp poly-T stretch and two microsatellite-like (TA)8(AT) and (TA)4 elements preceded by the ATTTA motif.

  3. Enzymatic properties of phenoloxidase from Pieris rapae (Lepidoptera) larvae

    Institute of Scientific and Technical Information of China (English)

    CHAO-BIN XUE; WAN-CHUN LUO; QING-XI CHEN; QIN WANG; LI-NA KE

    2006-01-01

    The kinetic parameters of partially purified phenoloxidase (PO, EC. 1.14.18.1) from the 5th instar larvae of Pieris rapae (Lepidoptera) were determined, using L-3, 4-dihydroxyphenylalanine (L-DOPA) as substrate. The optimal pH and temperature of the enzyme for the oxidation of L-DOPA were determined to be at pH 7.0 and at 42℃,respectively. The enzyme was stable between pH 6.5 and 7.4 and at temperatures lower than 37℃. At pH 6.8 and 37℃, the Michaelis constant (Km) and maximal velocity (Vm) of the enzyme for the oxidation of L-DOPA were determined to be 0.80 mmol/L and 1.84 μmol/ L/min, respectively. Tetra-hexylresorcinol and 4-dodecylresorcinol effectively inhibited activity of phenoloxidase and this inhibition was reversible and competitive, with the IC50 of 1.50 and 1.12μmol/L, respectively. The inhibition constants were estimated to be 0.50 and 0.47μmol/L, respectively.

  4. Chemical ecology and management of Lobesia botrana (Lepidoptera: Tortricidae).

    Science.gov (United States)

    Ioriatti, C; Anfora, G; Tasin, M; De Cristofaro, A; Witzgall, P; Lucchi, A

    2011-08-01

    The moth Lobesia botrana (Denis & Schiffermüller) (Lepidoptera: Tortricidae) feeds on grapes (Vitis vinifera L.), reducing yield and increasing susceptibility to fungal infections. L. botrana is among the most economically important insects in Europe and has recently been found in vineyards in Chile, Argentina, and California. Here, we review L. botrana biology and behavior in relation to its larval host (the grapevine) and its natural enemies. We also discuss current and future control strategies in light of our knowledge of chemical ecology, with an emphasis on the use of the sex pheromone-based strategies as an environmentally safe management approach. Pheromone-mediated mating disruption is the most promising technique available on grapes and is currently implemented on approximately 140,000 ha in Europe. Experience from several growing areas confirms the importance of collaboration between research, extension, growers, and pheromone-supply companies for the successful implementation of the mating disruption technique. In the vineyards where mating disruption has been successfully applied as an areawide strategy, the reduction in insecticide use has improved the quality of life for growers, consumers, as well as the public living near wine-growing areas and has thereby reduced the conflict between agricultural and urban communities.

  5. Morphological outcomes of gynandromorphism in Lycaeides butterflies (Lepidoptera: Lycaenidae).

    Science.gov (United States)

    Jahner, Joshua P; Lucas, Lauren K; Wilson, Joseph S; Forister, Matthew L

    2015-01-01

    The genitalia of male insects have been widely used in taxonomic identification and systematics and are potentially involved in maintaining reproductive isolation between species. Although sexual selection has been invoked to explain patterns of morphological variation in genitalia among populations and species, developmental plasticity in genitalia likely contributes to observed variation but has been rarely examined, particularly in wild populations. Bilateral gynandromorphs are individuals that are genetically male on one side of the midline and genetically female on the other, while mosaic gynandromorphs have only a portion of their body developing as the opposite sex. Gynandromorphs might offer unique insights into developmental plasticity because individuals experience abnormal cellular interactions at the genitalic midline. In this study, we compare the genitalia and wing patterns of gynandromorphic Anna and Melissa blue butterflies, Lycaeides anna (Edwards) (formerly L. idas anna) and L. melissa (Edwards) (Lepidoptera: Lycaenidae), to the morphology of normal individuals from the same populations. Gynandromorph wing markings all fell within the range of variation of normal butterflies; however, a number of genitalic measurements were outliers when compared with normal individuals. From these results, we conclude that the gynandromorphs' genitalia, but not wing patterns, can be abnormal when compared with normal individuals and that the gynandromorphic genitalia do not deviate developmentally in a consistent pattern across individuals. Finally, genetic mechanisms are considered for the development of gynandromorphism in Lycaeides butterflies. © The Author 2015. Published by Oxford University Press on behalf of the Entomological Society of America.

  6. First host plant records for Iridopsis hausmanni Vargas (Lepidoptera, Geometridae in the coastal valleys of northern Chile

    Directory of Open Access Journals (Sweden)

    Héctor A. Vargas

    2014-03-01

    Full Text Available First host plant records for Iridopsis hausmanni Vargas (Lepidoptera, Geometridae in the coastal valleys of northern Chile. The trees Haplorhus peruviana Engl. and Schinus molle L. (Anacardiaceae are mentioned as the first host plant records for the little known native moth Iridopsis hausmanni Vargas, 2007 (Lepidoptera, Geometridae, Ennominae in the coastal valleys of the northern Chilean Atacama Desert. This is also the first record of Anacardiaceae as host plant for a Neotropical species of Iridopsis Warren, 1894.

  7. On the Occurrence of Four Diatom Taxa from Eastern India with a Taxonomic Note

    Directory of Open Access Journals (Sweden)

    Jai Prakash Keshri

    2016-01-01

    Full Text Available Diatoms were collected from the Kotulpur area of West Bengal. Four diatom taxa, namely, Eunotia minor (Kützing Grunow, Achnanthidium minutissimum (Kützing Czarnecki, Lemnicola hungarica (Grunow Round and Basson, and Navicula radiosa Kützing were observed using scanning electron microscopy (SEM and identified in light of modern diatom taxonomic trends. Except Eunotia minor, all these taxa are new records to Eastern India. A note on the taxonomy of Achnanthes pseudobiasolletiana as described by Gandhi and Eunotia serrata var. diadema (Ehr. R. M. Patrick as reported by Dwivedi and Misra has been added.

  8. Comparative Root and Stem Anatomy of Four Rare Onobrychis Mill. (Fabaceae Taxa Endemic in Turkey

    Directory of Open Access Journals (Sweden)

    Mehmet TEKİN

    2015-09-01

    Full Text Available Four endemic taxa of Onobrychis Mill. genus, some of them being classified in the endangered threat category, were investigated for root and stem anatomy. Onobrychis quadrijuga, O. argyrea subsp. argyrea, O. tournefortii and O. albiflora were studied in regard to specific anatomy for the first time within the hereby study. Anatomical characters as the size and shape of the periderm, cortex, cambium cells in root and epidermis, collenchyma, cortex, cambium and pith cells in stem belonging to these four Onobrychis taxa were determined in detail. Based on the roots and stems measurements and analysis, specific anatomical differences between species were revealed.

  9. Automatic selection of reference taxa for protein-protein interaction prediction with phylogenetic profiling

    DEFF Research Database (Denmark)

    Simonsen, Martin; Maetschke, S.R.; Ragan, M.A.

    2012-01-01

    Motivation: Phylogenetic profiling methods can achieve good accuracy in predicting protein–protein interactions, especially in prokaryotes. Recent studies have shown that the choice of reference taxa (RT) is critical for accurate prediction, but with more than 2500 fully sequenced taxa publicly......: We present three novel methods for automating the selection of RT, using machine learning based on known protein–protein interaction networks. One of these methods in particular, Tree-Based Search, yields greatly improved prediction accuracies. We further show that different methods for constituting...

  10. New taxa, new records and name changes for southern African plants

    Directory of Open Access Journals (Sweden)

    B. C. de Wet

    1989-12-01

    Full Text Available Alterations to the inventory of about 24 000 species and infraspecific taxa of bryophytes and vascular plants in southern Africa are reported for the year 1988. The inventory, as currently maintained in the Taxon component of the PRECIS system, contains the accepted name for each taxon, synonyms previously in use as accepted names during the past half-century, and literature references necessary to identify species in each genus and to establish the synonymy. The inventory is updated as new research affecting plant classification in southern Africa is published. During 1988 there were 744 alterations, affecting about 3% of the total number of taxa.

  11. New taxa, new records and name changes for southern African plants

    Directory of Open Access Journals (Sweden)

    G. E. Gibbs Russell

    1988-12-01

    Full Text Available Alterations to the inventory of about 24 000 species and infraspecific taxa of bryophytes and vascular plants in southern Africa are reported for the year 1987. The inventory, as presently maintained in the Taxon component of the PRECIS system, contains the accepted name for each taxon, synonyms previously in use as accepted names during the past half-century, and literature references necessary to identify species in each genus and to establish the synonymy. The inventory is updated as new research affecting plant classification in southern Africa is published. During 1987 there were 678 alterations, representing about 2,8% of the total number of taxa.a

  12. Ionizing irradiation of adults of Angoumois grain moth (Lepidoptera: Gelechiidae) and Indianmeal moth (Lepidoptera: Pyralidae) to prevent reproduction, and implications for a generic irradiation treatment for insects.

    Science.gov (United States)

    Hallman, Guy J; Phillips, Thomas W

    2008-08-01

    Ionizing irradiation is used as a phytosanitary treatment against quarantine pests. A generic treatment of 400 Gy has been approved for commodities entering the United States against all insects except pupae and adults of Lepidoptera because some literature citations indicate that a few insects, namely, the Angoumois grain moth, Sitotroga cerealella (Olivier) (Lepidoptera: Gelechiidae), and the Indianmeal moth, Plodia interpunctella (Hübner) (Lepidoptera: Pyralidae), are not completely controlled at that dose. Radiotolerance in insects increases as the insects develop, so the minimum absorbed dose to prevent F1 egg hatch for these two species when irradiated as adults was examined. Also, because hypoxia is known to increase radiotolerance in insects, Angoumois grain moth radiotolerance was tested in a hypoxic atmosphere. A dose range of 336-388 Gy prevented F1 egg hatch from a total of 22,083 adult Indianmeal moths. Dose ranges of 443-505 and 590-674 Gy, respectively, prevented F1 egg hatch from a total of 15,264 and 13,677 adult Angoumois grain moths irradiated in ambient and hypoxic atmospheres. A generic dose of 600 Gy for all insects in ambient atmospheres might be efficacious, although many fresh commodities may not tolerate it when applied on a commercial scale.

  13. Installing hydrolytic activity into a completely de novo protein framework

    Science.gov (United States)

    Burton, Antony J.; Thomson, Andrew R.; Dawson, William M.; Brady, R. Leo; Woolfson, Derek N.

    2016-09-01

    The design of enzyme-like catalysts tests our understanding of sequence-to-structure/function relationships in proteins. Here we install hydrolytic activity predictably into a completely de novo and thermostable α-helical barrel, which comprises seven helices arranged around an accessible channel. We show that the lumen of the barrel accepts 21 mutations to functional polar residues. The resulting variant, which has cysteine-histidine-glutamic acid triads on each helix, hydrolyses p-nitrophenyl acetate with catalytic efficiencies that match the most-efficient redesigned hydrolases based on natural protein scaffolds. This is the first report of a functional catalytic triad engineered into a de novo protein framework. The flexibility of our system also allows the facile incorporation of unnatural side chains to improve activity and probe the catalytic mechanism. Such a predictable and robust construction of truly de novo biocatalysts holds promise for applications in chemical and biochemical synthesis.

  14. Genetic variation and the de novo assembly of human genomes.

    Science.gov (United States)

    Chaisson, Mark J P; Wilson, Richard K; Eichler, Evan E

    2015-11-01

    The discovery of genetic variation and the assembly of genome sequences are both inextricably linked to advances in DNA-sequencing technology. Short-read massively parallel sequencing has revolutionized our ability to discover genetic variation but is insufficient to generate high-quality genome assemblies or resolve most structural variation. Full resolution of variation is only guaranteed by complete de novo assembly of a genome. Here, we review approaches to genome assembly, the nature of gaps or missing sequences, and biases in the assembly process. We describe the challenges of generating a complete de novo genome assembly using current technologies and the impact that being able to perfectly sequence the genome would have on understanding human disease and evolution. Finally, we summarize recent technological advances that improve both contiguity and accuracy and emphasize the importance of complete de novo assembly as opposed to read mapping as the primary means to understanding the full range of human genetic variation.

  15. A comprehensive characterization of the caspase gene family in insects from the order Lepidoptera

    Directory of Open Access Journals (Sweden)

    Vogel Heiko

    2011-07-01

    Full Text Available Abstract Background The cell suicide pathway of apoptosis is a necessary event in the life of multicellular organisms. It is involved in many biological processes ranging from development to the immune response. Evolutionarily conserved proteases, called caspases, play a central role in regulating apoptosis. Reception of death stimuli triggers the activation of initiator caspases, which in turn activate the effector caspases. In Lepidoptera, apoptosis is crucial in processes such as metamorphosis or defending against baculovirus infection. The discovery of p35, a baculovirus protein inhibiting caspase activity, has led to the characterization of the first lepidopteran caspase, Sf-Caspase-1. Studies on Sf-Caspase-1 mode of activation suggested that apoptosis in Lepidoptera requires a cascade of caspase activation, as demonstrated in many other species. Results In order to get insights into this gene family in Lepidoptera, we performed an extensive survey of lepidopteran-derived EST datasets. We identified 66 sequences distributed among 27 species encoding putative caspases. Phylogenetic analyses showed that Lepidoptera possess at least 5 caspases, for which we propose a unified nomenclature. According to homology to their Drosophila counterparts and their primary structure, we determined that Lep-Caspase-1, -2 and -3 are putative effector caspases, whereas Lep-Caspase-5 and -6 are putative initiators. The likely function of Lep-Caspase-4 remains unclear. Lep-Caspase-2 is absent from the silkworm genome and appears to be noctuid-specific, and to have arisen from a tandem duplication of the Caspase-1 gene. In the tobacco hawkmoth, 3 distinct transcripts encoding putative Caspase-4 were identified, suggesting at least 2 duplication events in this species. Conclusions The basic repertoire of five major types of caspases shared among Lepidoptera seems to be smaller than for most other groups studied to date, but gene duplication still plays a role in

  16. The complete mitochondrial genome of the mountainous duskywing, Erynnis montanus (Lepidoptera: Hesperiidae): a new gene arrangement in Lepidoptera.

    Science.gov (United States)

    Wang, Ah Rha; Jeong, Heon Cheon; Han, Yeon Soo; Kim, Iksoo

    2014-04-01

    The mountainous duskywing, Erynnis montanus, belongs to a lepidopteran family Hesperiidae. The 15,530-bp long complete mitochondrial genome (mitogenome) of the species has the typical gene content of animals (13 protein-coding genes, two rRNA genes, 22 tRNA genes and one major non-coding A+T-rich region). As typical in lepidopteran mitogenome E. montanus mitogenome also contained a high A/T content in the whole genome (81.7%) and the CGA (arginine) as the start codon for the COI gene. Unlike other lepidopteran species, including two sequenced skippers, the E. montanus mitogenome has a unique arrangement tRNA(Ser)-tRNA(Asn), instead of the tRNA(Asn)-tRNA(Ser) found unanimously in other lepidopteran species, providing a new gene arrangement in Lepidoptera. Such rearrangement probably was likely caused by duplication of gene block tRNA(Ser)-tRNA(Asn) and subsequent random loss of tRNA(Asn) in the first copy and tRNA(Ser) in the second copy, resulting in the arrangement tRNA(Ser)-tRNA(Asn).

  17. Mitochondrial genome of the sweet potato hornworm, Agrius convolvuli (Lepidoptera: Sphingidae), and comparison with other Lepidoptera species.

    Science.gov (United States)

    Dai, Li-Shang; Li, Sheng; Yu, Hui-Min; Wei, Guo-Qing; Wang, Lei; Qian, Cen; Zhang, Cong-Fen; Li, Jun; Sun, Yu; Zhao, Yue; Zhu, Bao-Jian; Liu, Chao-Liang

    2017-02-01

    In the present study, we sequenced the complete mitochondrial genome (mitogenome) of Agrius convolvuli (Lepidoptera: Sphingidae) and compared it with previously sequenced mitogenomes of lepidopteran species. The mitogenome was a circular molecule, 15 349 base pairs (bp) long, containing 37 genes. The order and orientation of genes in the A. convolvuli mitogenome were similar to those in sequenced mitogenomes of other lepidopterans. All 13 protein-coding genes (PCGs) were initiated by ATN codons, except for the cytochrome c oxidase subunit 1 (cox1) gene, which seemed to be initiated by the codon CGA, as observed in other lepidopterans. Three of the 13 PCGs had the incomplete termination codon T, while the remainder terminated with TAA. Additionally, the codon distributions of the 13 PCGs revealed that Asn, Ile, Leu2, Lys, Phe, and Tyr were the most frequently used codon families. All transfer RNAs were folded into the expected cloverleaf structure except for tRNA(Ser)(AGN), which lacked a stable dihydrouridine arm. The length of the adenine (A) + thymine (T)-rich region was 331 bp. This region included the motif ATAGA followed by a 19-bp poly-T stretch and a microsatellite-like (TA)8 element next to the motif ATTTA. Phylogenetic analyses (maximum likelihood and Bayesian methods) showed that A. convolvuli belongs to the family Sphingidae.

  18. Novo sistema de armaduras de punçoamento

    OpenAIRE

    Claro, Pedro Henrique Bernardino

    2015-01-01

    Esta dissertação apresenta os resultados de um conjunto de ensaios sobre lajes fungiformes, armadas com um novo sistema de armaduras de punçoamento. Adicionalmente, também foram testadas lajes fungiformes com um novo sistema de armaduras horizontais. O sistema de armaduras de punçoamento consiste em estribos de ramos verticais produzidos a partir de malhas de varões eletrossoldados, ancorados na armadura longitudinal superior por um varão transversal eletrossoldado. As vantagens deste sistema...

  19. Airline Maintenance Manpower Optimization from the De Novo Perspective

    Science.gov (United States)

    Liou, James J. H.; Tzeng, Gwo-Hshiung

    Human resource management (HRM) is an important issue for today’s competitive airline marketing. In this paper, we discuss a multi-objective model designed from the De Novo perspective to help airlines optimize their maintenance manpower portfolio. The effectiveness of the model and solution algorithm is demonstrated in an empirical study of the optimization of the human resources needed for airline line maintenance. Both De Novo and traditional multiple objective programming (MOP) methods are analyzed. A comparison of the results with those of traditional MOP indicates that the proposed model and solution algorithm does provide better performance and an improved human resource portfolio.

  20. Idioma e identidad en el Novo Cinema Galego

    Directory of Open Access Journals (Sweden)

    Brais ROMERO SUÁREZ

    2015-12-01

    Full Text Available En boca de todos desde su nacimiento en 2010, el Novo Cinema Galego ha cosechado éxitos en todos los certámenes y festivales que ha estado presente. Desde el premio FIPRESCI en Cannes hasta el Mejor Director Emergente en Locarno, esta nueva corriente de cine sitúa a Galicia en el escenario mundial cinematográfico. Pero, ¿es adecuada la representación que hace el Novo Cinema Galego de Galicia? ¿Qué lugar ocupa el gallego en las obras de esta corriente?

  1. Incidência de tuberculose e taxa de cura, Brasil, 2000 a 2004 Tuberculosis incidence and cure rates, Brazil, 2000-2004

    Directory of Open Access Journals (Sweden)

    Ana Luiza Bierrenbach

    2007-09-01

    Full Text Available OBJETIVO: Descrever a distribuição geográfica da incidência de tuberculose, a partir de um conjunto de indicadores epidemiológicos e operacionais de dados de notificação oficial. MÉTODOS: Dados sobre incidência de tuberculose foram coletados no Sistema de Informação de Agravos de Notificação, após processo de pareamento e depuração de registros repetidos. As taxas de incidência de tuberculose foram calculadas segundo unidade geográfica, grupo etário, sexo, forma clínica e regime de tratamento, e padronizadas para a distribuição etária da população com base no Censo de 2000. RESULTADOS: Em 2004, o Brasil apresentou taxa de incidência de 41/100.000 habitantes, com 74.540 casos novos notificados. Desses, 52,8% eram casos pulmonares com baciloscopia positiva, 24,1% estavam em tratamento supervisionado, 63,5% eram provenientes de capitais ou das regiões metropolitanas e 54,9% eram casos curados. Excluindo-se os registros sem preenchimento da variável de desfecho, a proporção de cura alcançou 72,4% para casos novos, 47% para casos novos HIV positivos, 64,9% para recidivas, 64,5% transferências e 40% para reingressos após abandono. A taxa de cura para os casos novos em tratamento supervisionado foi de 77,1%. A proporção de registros sem informação sobre desfecho foi maior em anos mais recentes. CONCLUSÕES: Houve extensas diferenças estaduais em relação à incidência e às categorias de desfecho. Para alcançar a meta de 85% de cura para casos novos e aumentar a cura dos casos HIV positivos e reingressos são necessários esforços adicionais por parte do Programa Nacional de Controle da Tuberculose, incluindo a expansão da estratégia de tratamento diretamente supervisionado.OBJECTIVE: To describe the geographical distribution of tuberculosis incidence rates based on a set of epidemiological and operational indicators from information system database. METHODS: Data from the Sistema de Informação de Agravos

  2. Spatial structure of a natural mixed topodeme of subalpine Sorbus taxa

    Directory of Open Access Journals (Sweden)

    Dušan Gömöry

    2011-01-01

    Full Text Available Spatial distribution and genetic variation of a population of Sorbus chamaemespilus (L. Crantz and putative hybrids between S. chamaemespilus, S. aria and S. aucuparia growing in the nature reserve Skalnä Alpa (central Slovakia were studied. The analysis of spatial patterns using Ripley's K-function revealed a significant clustering of the adults of both S. chamaemespilus and hybrid taxa at distances up to ~15 m and a strong affinity between both taxonomical groups, indicating similar ecological requirements. Bivariate point-pattern analysis considering cardinal direction showed that juvenile individuals of S. chamaemespilus are clustered around the adults up to the distance of ~2 m, whereas in hybrid taxa with larger and more dense crowns, juveniles are clustered at distances more than ~3 m from the adults. The analysis of genetic variation in a subset of adult shrubs using 4 nuclear microsatellite loci revealed that unlike expected, there was no variation in S. chamaemespilus but several genotypes were found in the group of hybrid taxa. Implications for the reproduction system and conservation of the investigated taxa are discussed.

  3. Twelve invasive plant taxa in U.S. western riparian ecosystems

    Science.gov (United States)

    Assessments of stream ecosystems often include an evaluation of riparian condition; a key stressor in riparian ecosystems is the presence of invasive plants. We analyzed the distribution of 12 invasive taxa (common burdock [Arctium minus], giant reed [Arundo donax], cheatgrass [B...

  4. PERENNIAL HELIANTHUS TAXA IN TÂRGU-MURES CITY AND ITS SURROUNDINGS

    Directory of Open Access Journals (Sweden)

    FILEP RITA

    2010-12-01

    Full Text Available Although in the neighbouring countries several perennial Helianthus taxa have been recorded in the last decade, in Romania only three have been identified so far. The literature and herbaria data of Târgu-Mures date back to the end of the XIXth century, and only refer to H. × multiflorus and H. tuberosus. The aim of this study was to identify the perennial Helianthus taxa in this region and to prepare their current distribution map. The survey was conducted in Târgu Mures city and the neighbouring villages: Livezeni, Sântana de Mures, Sâncraiu de Mures, Sângeorgiu de Mures, and Corunca. Four taxa were identified: H. pauciflorus Nutt., H. × laetiflorus Pers., H. tuberosus L. s.str., and Helianthus tuberosus L. s.l. The first two taxa are cultivated as ornamental plants, H. tuberosus s. str. is cultivated in a few farms, whereas H. tuberosus s. l. is an invasive species that spreads along the rivers.

  5. Neue Taxa von Lunatipula Edwards aus der mediterranen Subregion der Palaearktis (Diptera, Tipulidae, Tipula Linnaeus)

    NARCIS (Netherlands)

    Theischinger, Günther

    1987-01-01

    12 new species and 3 new subspecies of Lunatipula Edwards from Greece and Turkey are described or defined. The new taxa are: T. (L.) montifer tasucuensis, T. (L.) musensis, T. (L.) vermooleni, T. (L.) lyrion, Tipula (Lunatipula) paravelox, T. (L.) soosi izmirensis, T. (L.) brinki, T. (L.) canakkalen

  6. Sequence Analysis of SSR-Flanking Regions Identifies Genome Affinities between Pasture Grass Fungal Endophyte Taxa

    Directory of Open Access Journals (Sweden)

    Eline van Zijll de Jong

    2011-01-01

    Full Text Available Fungal species of the Neotyphodium and Epichloë genera are endophytes of pasture grasses showing complex differences of life-cycle and genetic architecture. Simple sequence repeat (SSR markers have been developed from endophyte-derived expressed sequence tag (EST collections. Although SSR array size polymorphisms are appropriate for phenetic analysis to distinguish between taxa, the capacity to resolve phylogenetic relationships is limited by both homoplasy and heteroploidy effects. In contrast, nonrepetitive sequence regions that flank SSRs have been effectively implemented in this study to demonstrate a common evolutionary origin of grass fungal endophytes. Consistent patterns of relationships between specific taxa were apparent across multiple target loci, confirming previous studies of genome evolution based on variation of individual genes. Evidence was obtained for the definition of endophyte taxa not only through genomic affinities but also by relative gene content. Results were compatible with the current view that some asexual Neotyphodium species arose following interspecific hybridisation between sexual Epichloë ancestors. Phylogenetic analysis of SSR-flanking regions, in combination with the results of previous studies with other EST-derived SSR markers, further permitted characterisation of Neotyphodium isolates that could not be assigned to known taxa on the basis of morphological characteristics.

  7. Life history strategies of cladocerans: comparisons of tropical and temperate taxa

    NARCIS (Netherlands)

    Sarma, S.S.S.; Nandini, S.; Gulati, R.D.

    2005-01-01

    We review recent works on different life history variables of cladoceran taxa in tropical and temperate freshwater bodies, comparing the strategies that cladocerans have evolved to adapt to contrasting environmental conditions in the two geographical regions. These life-history parameters relate to

  8. Neue Taxa von Lunatipula Edwards aus der mediterranen Subregion der Palaearktis (Diptera, Tipulidae, Tipula Linnaeus)

    NARCIS (Netherlands)

    Theischinger, Günther

    1987-01-01

    12 new species and 3 new subspecies of Lunatipula Edwards from Greece and Turkey are described or defined. The new taxa are: T. (L.) montifer tasucuensis, T. (L.) musensis, T. (L.) vermooleni, T. (L.) lyrion, Tipula (Lunatipula) paravelox, T. (L.) soosi izmirensis, T. (L.) brinki, T. (L.) canakkalen

  9. Life history strategies of cladocerans: comparisons of tropical and temperate taxa

    NARCIS (Netherlands)

    Sarma, S.S.S.; Nandini, S.; Gulati, R.D.

    2005-01-01

    We review recent works on different life history variables of cladoceran taxa in tropical and temperate freshwater bodies, comparing the strategies that cladocerans have evolved to adapt to contrasting environmental conditions in the two geographical regions. These life-history parameters relate to

  10. Neue Taxa von Lunatipula Edwards aus der mediterranen Subregion der Palaearktis (Diptera, Tipulidae, Tipula Linnaeus)

    NARCIS (Netherlands)

    Theischinger, Günther

    1979-01-01

    Eight new species and three new subspecies of Lunatipula Edwards are described and their affinities are discussed. The new taxa are: Tipula (Lunatipula) rocina from Spain, T. (L.) antichasia, T. (L.) hera, T. (L.) klytaimnestra, T. (L.) pythia. T. (L.) caudispina parnonensis, T. (L.) penelope

  11. Neue Taxa von Lunatipula Edwards aus der mediterranen Subregion der Palaearktis (Diptera, Tipulidae, Tipula Linnaeus)

    NARCIS (Netherlands)

    Theischinger, Günther

    1987-01-01

    12 new species and 3 new subspecies of Lunatipula Edwards from Greece and Turkey are described or defined. The new taxa are: T. (L.) montifer tasucuensis, T. (L.) musensis, T. (L.) vermooleni, T. (L.) lyrion, Tipula (Lunatipula) paravelox, T. (L.) soosi izmirensis, T. (L.) brinki, T. (L.)

  12. New taxa, new records and name changes for southern African plants

    Directory of Open Access Journals (Sweden)

    B. C. de Wet

    1991-12-01

    Full Text Available Additions and alterations to the inventory of about 26 000 plant taxa in southern Africa are reported for the period from February 1990 to February 1991. In this period a total of 1 080 alterations have been recorded. These changes result from the continual surveying of taxonomic literature received by the library of the National Botanical Institute.

  13. Sur la presence du genre Gammarus au Liban, avec description de deux nouveaux taxa (Crustacea, Amphipoda)

    NARCIS (Netherlands)

    Alouf, N.J.

    1979-01-01

    Description of two new taxa, Gammarus oronticus n.sp. and G. laticoxalis libanicus n.ssp., both related to the Gammarus pulex-group, from the Lebanon. Data about their ecology and new data on G. syriacus Chevreux are given.

  14. Trait-based diversification shifts reflect differential extinction among fossil taxa.

    Science.gov (United States)

    Wagner, Peter J; Estabrook, George F

    2014-11-18

    Evolution provides many cases of apparent shifts in diversification associated with particular anatomical traits. Three general models connect these patterns to anatomical evolution: (i) elevated net extinction of taxa bearing particular traits, (ii) elevated net speciation of taxa bearing particular traits, and (iii) elevated evolvability expanding the range of anatomies available to some species. Trait-based diversification shifts predict elevated hierarchical stratigraphic compatibility (i.e., primitive→derived→highly derived sequences) among pairs of anatomical characters. The three specific models further predict (i) early loss of diversity for taxa retaining primitive conditions (elevated net extinction), (ii) increased diversification among later members of a clade (elevated net speciation), and (iii) increased disparity among later members in a clade (elevated evolvability). Analyses of 319 anatomical and stratigraphic datasets for fossil species and genera show that hierarchical stratigraphic compatibility exceeds the expectations of trait-independent diversification in the vast majority of cases, which was expected if trait-dependent diversification shifts are common. Excess hierarchical stratigraphic compatibility correlates with early loss of diversity for groups retaining primitive conditions rather than delayed bursts of diversity or disparity across entire clades. Cambrian clades (predominantly trilobites) alone fit null expectations well. However, it is not clear whether evolution was unusual among Cambrian taxa or only early trilobites. At least among post-Cambrian taxa, these results implicate models, such as competition and extinction selectivity/resistance, as major drivers of trait-based diversification shifts at the species and genus levels while contradicting the predictions of elevated net speciation and elevated evolvability models.

  15. Differential growth responses of soil bacterial taxa to carbon substrates of varying chemical recalcitrance

    Energy Technology Data Exchange (ETDEWEB)

    Goldfarb, K.C.; Karaoz, U.; Hanson, C.A.; Santee, C.A.; Bradford, M.A.; Treseder, K.K.; Wallenstein, M.D.; Brodie, E.L.

    2011-04-18

    Soils are immensely diverse microbial habitats with thousands of co-existing bacterial, archaeal, and fungal species. Across broad spatial scales, factors such as pH and soil moisture appear to determine the diversity and structure of soil bacterial communities. Within any one site however, bacterial taxon diversity is high and factors maintaining this diversity are poorly resolved. Candidate factors include organic substrate availability and chemical recalcitrance, and given that they appear to structure bacterial communities at the phylum level, we examine whether these factors might structure bacterial communities at finer levels of taxonomic resolution. Analyzing 16S rRNA gene composition of nucleotide analog-labeled DNA by PhyloChip microarrays, we compare relative growth rates on organic substrates of increasing chemical recalcitrance of >2,200 bacterial taxa across 43 divisions/phyla. Taxa that increase in relative abundance with labile organic substrates (i.e., glycine, sucrose) are numerous (>500), phylogenetically clustered, and occur predominantly in two phyla (Proteobacteria and Actinobacteria) including orders Actinomycetales, Enterobacteriales, Burkholderiales, Rhodocyclales, Alteromonadales, and Pseudomonadales. Taxa increasing in relative abundance with more chemically recalcitrant substrates (i.e., cellulose, lignin, or tannin-protein) are fewer (168) but more phylogenetically dispersed, occurring across eight phyla and including Clostridiales, Sphingomonadalaes, Desulfovibrionales. Just over 6% of detected taxa, including many Burkholderiales increase in relative abundance with both labile and chemically recalcitrant substrates. Estimates of median rRNA copy number per genome of responding taxa demonstrate that these patterns are broadly consistent with bacterial growth strategies. Taken together, these data suggest that changes in availability of intrinsically labile substrates may result in predictable shifts in soil bacterial composition.

  16. Quaternary disappearance of tree taxa from Southern Europe: Timing and trends

    Science.gov (United States)

    Magri, Donatella; Di Rita, Federico; Aranbarri, Josu; Fletcher, William; González-Sampériz, Penélope

    2017-05-01

    A hundred pollen and plant macrofossil records from the Iberian Peninsula, Southern France, the Italian Peninsula, Greece and the Aegean, and the southwestern Black Sea area formed the basis for a review of the Quaternary distribution and extirpation of tree populations from Southern Europe. Following a discussion of the caveats/challenges about using pollen data, the Quaternary history of tree taxa has been reconstructed with attention to Taxodium/Glyptostrobus, Sciadopitys, Cathaya, Cedrus, Tsuga, Eucommia, Engelhardia, Carya, Pterocarya, Parrotia, Liquidambar, and Zelkova. The timing of extinction, distributed over the whole Quaternary, appears very diverse from one region to the other, in agreement with current biodiversity in Southern Europe. The geographical patterns of persistence/disappearance of taxa show unexpected trends and rule out a simple North to South and/or West to East trend in extirpations. In particular, it is possible to detect disjunct populations (Engelhardia), long-term persistence of taxa in restricted regions (Sciadopitys), distinct populations/species/genera in different geographical areas (Taxodium type). Some taxa that are still widespread in Europe have undergone extirpation in Mediterranean areas in the lateglacial period and Holocene (Buxus, Carpinus betulus, Picea); they provide an indication of the modes of disappearance of tree populations that may be useful to evaluate correctly the vulnerability of modern fragmented plant populations. The demographic histories of tree taxa obtained by combined palaeobotanical and genetic studies is a most challenging field of research needed not only to assess species/population differentiation, but also to reach a better understanding of extinction processes, an essential task in the current global change scenario.

  17. Trait-based diversification shifts reflect differential extinction among fossil taxa

    Science.gov (United States)

    Wagner, Peter J.; Estabrook, George F.

    2014-11-01

    Evolution provides many cases of apparent shifts in diversification associated with particular anatomical traits. Three general models connect these patterns to anatomical evolution: (i) elevated net extinction of taxa bearing particular traits, (ii) elevated net speciation of taxa bearing particular traits, and (iii) elevated evolvability expanding the range of anatomies available to some species. Trait-based diversification shifts predict elevated hierarchical stratigraphic compatibility (i.e., primitive→derived→highly derived sequences) among pairs of anatomical characters. The three specific models further predict (i) early loss of diversity for taxa retaining primitive conditions (elevated net extinction), (ii) increased diversification among later members of a clade (elevated net speciation), and (iii) increased disparity among later members in a clade (elevated evolvability). Analyses of 319 anatomical and stratigraphic datasets for fossil species and genera show that hierarchical stratigraphic compatibility exceeds the expectations of trait-independent diversification in the vast majority of cases, which was expected if trait-dependent diversification shifts are common. Excess hierarchical stratigraphic compatibility correlates with early loss of diversity for groups retaining primitive conditions rather than delayed bursts of diversity or disparity across entire clades. Cambrian clades (predominantly trilobites) alone fit null expectations well. However, it is not clear whether evolution was unusual among Cambrian taxa or only early trilobites. At least among post-Cambrian taxa, these results implicate models, such as competition and extinction selectivity/resistance, as major drivers of trait-based diversification shifts at the species and genus levels while contradicting the predictions of elevated net speciation and elevated evolvability models.

  18. Direct Visualization of De novo Lipogenesis in Single Living Cells

    Science.gov (United States)

    Li, Junjie; Cheng, Ji-Xin

    2014-10-01

    Increased de novo lipogenesis is being increasingly recognized as a hallmark of cancer. Despite recent advances in fluorescence microscopy, autoradiography and mass spectrometry, direct observation of de novo lipogenesis in living systems remains to be challenging. Here, by coupling stimulated Raman scattering (SRS) microscopy with isotope labeled glucose, we were able to trace the dynamic metabolism of glucose in single living cells with high spatial-temporal resolution. As the first direct visualization, we observed that glucose was largely utilized for lipid synthesis in pancreatic cancer cells, which occurs at a much lower rate in immortalized normal pancreatic epithelial cells. By inhibition of glycolysis and fatty acid synthase (FAS), the key enzyme for fatty acid synthesis, we confirmed the deuterium labeled lipids in cancer cells were from de novo lipid synthesis. Interestingly, we also found that prostate cancer cells exhibit relatively lower level of de novo lipogenesis, but higher fatty acid uptake compared to pancreatic cancer cells. Together, our results demonstrate a valuable tool to study dynamic lipid metabolism in cancer and other disorders.

  19. Point mutations as a source of de novo genetic disease

    NARCIS (Netherlands)

    Ligt, J. de; Veltman, J.A.; Vissers, L.E.L.M.

    2013-01-01

    Family-based next generation sequencing (NGS) has recently pointed to an important role for de novo germline point mutations in both rare and common genetic disorders associated with reduced fitness. In this review we highlight the impact of the mutational target size on the frequency of diseases ca

  20. De Novo Coding Variants Are Strongly Associated with Tourette Disorder

    NARCIS (Netherlands)

    Willsey, A. Jeremy; Fernandez, Thomas V.; Yu, Dongmei; King, Robert A.; Dietrich, Andrea; Xing, Jinchuan; Sanders, Stephan J.; Mandell, Jeffrey D.; Huang, Alden Y.; Richer, Petra; Smith, Louw; Dong, Shan; Samocha, Kaitlin E.; Neale, Benjamin M.; Coppola, Giovanni; Mathews, Carol A.; Tischfield, Jay A.; Scharf, Jeremiah M.; State, Matthew W.; Heiman, Gary A.

    2017-01-01

    Whole-exome sequencing (WES) and de novo variant detection have proven a powerful approach to gene discovery in complex neurodevelopmental disorders. We have completed WES of 325 Tourette disorder trios from the Tourette International Collaborative Genetics cohort and a replication sample of 186

  1. De novo synthesis of milk triglycerides in humans

    Science.gov (United States)

    Mammary gland (MG) de novo lipogenesis contributes significantly to milk fat in animals but little is known in humans. Objective: To test the hypothesis that the incorporation of 13C carbons from [U-13C]glucose into fatty acids (FA) and glycerol in triglycerides (TG) will be greater: 1) in milk tha...

  2. Model-Based GUI Testing Using Uppaal at Novo Nordisk

    DEFF Research Database (Denmark)

    H. Hjort, Ulrik; Rasmussen, Jacob Illum; Larsen, Kim Guldstrand

    2009-01-01

    This paper details a collaboration between Aalborg University and Novo Nordiskin developing an automatic model-based test generation tool for system testing of the graphical user interface of a medical device on an embedded platform. The tool takes as input an UML Statemachine model and generates...

  3. The flat fishes of Porto Novo (India) (Pisces, Pleuronectiformes)

    NARCIS (Netherlands)

    Ramanathan, N.; Natarajan, R.

    1980-01-01

    Thirty-two species of flat fishes from Porto Novo (India) are recorded and depicted. Along with meristic and morphometric data, lateral lines, scales, gillrakers, gillraker serrae, and pyloric caecae have been taken into consideration to provide information on the identity of each species. A key for

  4. De Novo Coding Variants Are Strongly Associated with Tourette Disorder

    NARCIS (Netherlands)

    Willsey, A. Jeremy; Fernandez, Thomas V.; Yu, Dongmei; King, Robert A.; Dietrich, Andrea; Xing, Jinchuan; Sanders, Stephan J.; Mandell, Jeffrey D.; Huang, Alden Y.; Richer, Petra; Smith, Louw; Dong, Shan; Samocha, Kaitlin E.; Neale, Benjamin M.; Coppola, Giovanni; Mathews, Carol A.; Tischfield, Jay A.; Scharf, Jeremiah M.; State, Matthew W.; Heiman, Gary A.

    2017-01-01

    Whole-exome sequencing (WES) and de novo variant detection have proven a powerful approach to gene discovery in complex neurodevelopmental disorders. We have completed WES of 325 Tourette disorder trios from the Tourette International Collaborative Genetics cohort and a replication sample of 186 tri

  5. Review of the Blastobasinae of Costa Rica (Lepidoptera: Gelechioidea: Blastobasidae).

    Science.gov (United States)

    Adamski, David

    2013-02-25

    The Blastobasinae (Lepidoptera: Gelechioidea: Blastobasidae) of Costa Rica are reviewed. Five new genera, Barbaloba, Hallicis, Koleps, Pheos, and Pseudokoleps, and 101 new species are described. They include: Barbaloba jubae, B. meleagrisellae, Hallicis bisetosellus, H. calvicula, Koleps angulatus, Pheos aculeatus, Pseudokoleps akainae, Blastobasis abollae, B. achaea, B. aedes, B. babae, B. balucis, B. beo, B. caetrae, B. chanes, B. custodis, B. dapis, B. deae, B. deliciolarum, B. dicionis, B. echus, B. erae, B. fax, B. furtivus, B. iuanae, B. lex, B. litis, B. lygdi, B. manto, B. neniae, B. nivis, B. orithyia, B. paludis, B. phaedra, B. rotae, B. rotullae, B. tapetae, B. thyone, B. usurae, B. vesta, B. xiphiae, Hypatopa actes, H. acus, H. agnae, H. arxcis, H. bilobata, H. caedis, H. caepae, H. cladis, H. cotis, H. cotytto, H. crux, H. cyane, H. dicax, H. dolo, H. dux, H. edax, H. eos, H. erato, H. fio, H. gena, H. hecate, H. hera, H. hora, H. io, H. ira, H. leda, H. limae, H. lucina, H. joniella, H. juno, H. manus, H. mora, H. musa, H. nex, H. nox, H. phoebe, H. pica, H. plebis, H. rabio, H. rea, H. rego, H. rudis, H. sais, H. scobis, H. semela, H. solea, H. styga, H. texla, H. texo, H. umbra, H. verax, H. vitis, H. vox, Pigritia dido, P. faux, P. gruis, P. haha, P. sedis, P. stips, and P. ululae. Diagnoses, descriptions, and type data are provided for each species. Photographs of imagos, illustrations of wing venation for selected species, male and female genitalia, and distribution maps are furnished. Keys to all genera in Blastobasinae and keys to all species within each genus are provided to assist with identifications. In addition, scanning electron micrographs of the inner surface of the dilated first antennal flagellomere and associated sex scales for all Blastobasis are provided. Blastobasis coffeaella (Busck, 1925), B. graminea Adamski, 1999, Hypatopa tapadulcea Adamski, 1999, and Pigritia marjoriella Adamski, 1998 are redescribed.

  6. Evaluating trap crops for diamondback moth, Plutella xylostella (Lepidoptera: Plutellidae).

    Science.gov (United States)

    Badenes-Perez, Francisco R; Shelton, Anthony M; Nault, Brian A

    2004-08-01

    Potential trap crops for the diamondback moth, Plutella xylostella (L.) (Lepidoptera: Plutellidae), were evaluated through a series of ovipositional preference and larval survival experiments in outdoor screenhouses in 2002 and 2003. Hosts examined as trap crops were glossy and waxy collards, Brassica oleracea L. variety acephala; Indian mustard, Brassica juncea (L.) Czern; and yellow rocket, Barbarea vulgaris (R. Br.) variety arcuata. More eggs were laid on the potential trap crops, with the exception of waxy collards, than on cabbage. When P. xylostella was offered multiple hosts at the same time, numbers of eggs laid on glossy collards, Indian mustard, and yellow rocket were 3, 18, and 12 times greater than on cabbage, respectively. Similarly, when P. xylostella was offered a single trap crop host and cabbage, numbers of eggs laid on glossy collards, Indian mustard, and yellow rocket were 300, 19, and 110 times greater than on cabbage, respectively. Our studies suggest differences in oviposition between the potential trap crops and cabbage were likely due to host volatiles, leaf morphology and color, or a combination of these factors, rather than to total leaf areas, leaf shape, or plant architecture. Two-choice tests with a Y-tube olfactometer indicated that plant volatiles were major factors in P. xylostella host preference. The percentage larval survival from egg to pupation was 22.2% on cabbage, 18.9% on waxy collards, and 24.4% on Indian mustard, whereas survival was significantly lower on glossy collards (6.7%) and yellow rocket (0%). Based on our tests, it seems that yellow rocket may be the best candidate for use as a trap crop for P. xylostella because it is highly attractive for oviposition, but larvae do not survive on it.

  7. De novo copy number variations in cloned dogs from the same nuclear donor

    OpenAIRE

    Jung, Seung-Hyun; Yim, Seon-Hee; Oh, Hyun Ju; Park, Jung Eun; Kim, Min Jung; Kim, Geon A; Kim, Tae-Min; Kim, Jin-Soo; Lee, Byeong Chun; Chung, Yeun-Jun

    2013-01-01

    Background Somatic mosaicism of copy number variants (CNVs) in human body organs and de novo CNV event in monozygotic twins suggest that de novo CNVs can occur during mitotic recombination. These de novo CNV events are important for understanding genetic background of evolution and diverse phenotypes. In this study, we explored de novo CNV event in cloned dogs with identical genetic background. Results We analyzed CNVs in seven cloned dogs using the nuclear donor genome as reference by array-...

  8. ITS2 secondary structure improves phylogeny estimation in a radiation of blue butterflies of the subgenus Agrodiaetus (Lepidoptera: Lycaenidae: Polyommatus

    Directory of Open Access Journals (Sweden)

    Wolf Matthias

    2009-12-01

    Full Text Available Abstract Background Current molecular phylogenetic studies of Lepidoptera and most other arthropods are predominantly based on mitochondrial genes and a limited number of nuclear genes. The nuclear genes, however, generally do not provide sufficient information for young radiations. ITS2 , which has proven to be an excellent nuclear marker for similarly aged radiations in other organisms like fungi and plants, is only rarely used for phylogeny estimation in arthropods, although universal primers exist. This is partly due to difficulties in the alignment of ITS2 sequences in more distant taxa. The present study uses ITS2 secondary structure information to elucidate the phylogeny of a species-rich young radiation of arthropods, the butterfly subgenus Agrodiaetus. One aim is to evaluate the efficiency of ITS2 to resolve the phylogeny of the subgenus in comparison with COI , the most important mitochondrial marker in arthropods. Furthermore, we assess the use of compensatory base changes in ITS2 for the delimitation of species and discuss the prospects of ITS2 as a nuclear marker for barcoding studies. Results In the butterfly family Lycaenidae, ITS2 secondary structure enabled us to successfully align sequences of different subtribes in Polyommatini and produce a Profile Neighbour Joining tree of this tribe, the resolution of which is comparable to phylogenetic trees obtained with COI+COII . The subgenus Agrodiaetus comprises 6 major clades which are in agreement with COI analyses. A dispersal-vicariance analysis (DIVA traced the origin of most Agrodiaetus clades to separate biogeographical areas in the region encompassing Eastern Anatolia, Transcaucasia and Iran. Conclusions With the inclusion of secondary structure information, ITS2 appears to be a suitable nuclear marker to infer the phylogeny of young radiations, as well as more distantly related genera within a diverse arthropod family. Its phylogenetic signal is comparable to the

  9. Biologia de Dichomeris famulata Meyrick, 1914 (Lepidoptera: Gelechiidae em milho Biology of Dichomeris famulata Meyrick, 1914 (Lepidoptera: Gelechiidae in maize

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    Luiz Henrique da Silva Fagundes Marques

    2011-01-01

    Full Text Available Dichomeris famulata Meyrick, 1914 (Lepidoptera: Gelechiidae é uma nova praga da espiga de milho no Brasil, sendo seu estudo importante em áreas de produção de sementes porque os grãos atacados pelas lagartas não germinam. O objetivo deste trabalho foi estudar a sua biologia em condições de laboratório (25±2°C, UR de 65±10% e fotofase de 14 horas. O ciclo biológico (ovo-adulto foi de 35,2 dias. O período de incubação foi de 4,1 dias. A duração média da fase larval foi de 21,1 dias, sendo observados cinco ínstares larvais. A fase pupal durou 8,4 dias e o peso de pupa de machos e fêmeas foi de 12,4 e 11,3mg, respectivamente. As fêmeas colocaram, em média, 118 ovos, apresentando um período de pré-oviposição de 10,7 dias e de oviposição de 14,0 dias. A longevidade média de machos e fêmeas foi de 37,02 e 44,16 dias, respectivamente, e a razão sexual de 0,48. As lagartas danificam os estilo-estigmas e os grãos em estado leitoso por meio de pequenos orifícios de entrada, prejudicando o endosperma e principalmente a região do embrião, inutilizando-os para sementes. Os resultados obtidos neste trabalho fornecem subsídios para o estabelecimento de estratégias de manejo do inseto, especialmente em áreas de produção de sementes.The caterpillar Dichomeris famulata Meyrick, 1914 (Lepidoptera: Gelechiidae is a new pest of corn ear in Brazil, and its study is important in seed fields. The aim of this was to study the biology of this pest under laboratory conditions (25±2°C, 65±10% of RH and 14-hours of photophase. The biological cycle (egg-adult was of 35.2 days. The incubation period was of 4.1 days. The average larval development time was of 21.1 days, and 5 instars were observed. The pupal period was of 8.4 days and the pupae weight was of 12.4 and 11.3 mg for males and females, respectively. The females laid an average of 118 eggs with a pre-oviposition period of 10.7 days and an oviposition time of 14.0 days. The

  10. Ambiguous taxa: Effects on the characterization and interpretation of invertebrate assemblages

    Science.gov (United States)

    Cuffney, T.F.; Bilger, M.D.; Haigler, A.M.

    2007-01-01

    Damaged and immature specimens often result in macroinvertebrate data that contain ambiguous parent-child pairs (i.e., abundances associated with multiple related levels of the taxonomic hierarchy such as Baetis pluto and the associated ambiguous parent Baetis sp.). The choice of method used to resolve ambiguous parent-child pairs may have a very large effect on the characterization of invertebrate assemblages and the interpretation of responses to environmental change because very large proportions of taxa richness (73-78%) and abundance (79-91%) can be associated with ambiguous parents. To address this issue, we examined 16 variations of 4 basic methods for resolving ambiguous taxa: RPKC (remove parent, keep child), MCWP (merge child with parent), RPMC (remove parent or merge child with parent depending on their abundances), and DPAC (distribute parents among children). The choice of method strongly affected assemblage structure, assemblage characteristics (e.g., metrics), and the ability to detect responses along environmental (urbanization) gradients. All methods except MCWP produced acceptable results when used consistently within a study. However, the assemblage characteristics (e.g., values of assemblage metrics) differed widely depending on the method used, and data should not be combined unless the methods used to resolve ambiguous taxa are well documented and are known to be comparable. The suitability of the methods was evaluated and compared on the basis of 13 criteria that considered conservation of taxa richness and abundance, consistency among samples, methods, and studies, and effects on the interpretation of the data. Methods RPMC and DPAC had the highest suitability scores regardless of whether ambiguous taxa were resolved for each sample separately or for a group of samples. Method MCWP gave consistently poor results. Methods MCWP and DPAC approximate the use of family-level identifications and operational taxonomic units (OTU), respectively. Our

  11. Helicoverpa zea (Lepidoptera: Noctuidae) and Spodoptera frugiperda (Lepidoptera: Noctuidae) Responses to Sorghum bicolor (Poales: Poaceae) Tissues From Lowered Lignin Lines.

    Science.gov (United States)

    Dowd, Patrick F; Sattler, Scott E

    2015-01-01

    The presence of lignin within biomass impedes the production of liquid fuels. Plants with altered lignin content and composition are more amenable to lignocellulosic conversion to ethanol and other biofuels but may be more susceptible to insect damage where lignin is an important resistance factor. However, reduced lignin lines of switchgrasses still retained insect resistance in prior studies. Therefore, we hypothesized that sorghum lines with lowered lignin content will also retain insect resistance. Sorghum excised leaves and stalk pith Sorghum bicolor (L.) Moench (Poales: Poaceae) from near isogenic brown midrib (bmr) 6 and 12 mutants lines, which have lowered lignin content and increased lignocellulosic ethanol conversion efficiency, were examined for insect resistance relative to wild-type (normal BTx623). Greenhouse and growth chamber grown plant tissues were fed to first-instar larvae of corn earworms, Helicoverpa zea (Boddie) and fall armyworms Spodoptera frugiperda (J.E. Smith) (Lepidoptera: Noctuidae), two sorghum major pests. Younger bmr leaves had significantly greater feeding damage in some assays than wild-type leaves, but older bmr6 leaves generally had significantly less damage than wild-type leaves. Caterpillars feeding on the bmr6 leaves often weighed significantly less than those feeding on wild-type leaves, especially in the S. frugiperda assays. Larvae fed the pith from bmr stalks had significantly higher mortality compared with those larvae fed on wild-type pith, which suggested that bmr pith was more toxic. Thus, reducing lignin content or changing subunit composition of bioenergy grasses does not necessarily increase their susceptibility to insects and may result in increased resistance, which would contribute to sustainable production.

  12. Helicoverpa zea (Lepidoptera: Noctuidae) and Spodoptera frugiperda (Lepidoptera: Noctuidae) Responses to Sorghum bicolor (Poales: Poaceae) Tissues From Lowered Lignin Lines

    Science.gov (United States)

    Dowd, Patrick F.; Sattler, Scott E.

    2015-01-01

    The presence of lignin within biomass impedes the production of liquid fuels. Plants with altered lignin content and composition are more amenable to lignocellulosic conversion to ethanol and other biofuels but may be more susceptible to insect damage where lignin is an important resistance factor. However, reduced lignin lines of switchgrasses still retained insect resistance in prior studies. Therefore, we hypothesized that sorghum lines with lowered lignin content will also retain insect resistance. Sorghum excised leaves and stalk pith Sorghum bicolor (L.) Moench (Poales: Poaceae) from near isogenic brown midrib (bmr) 6 and 12 mutants lines, which have lowered lignin content and increased lignocellulosic ethanol conversion efficiency, were examined for insect resistance relative to wild-type (normal BTx623). Greenhouse and growth chamber grown plant tissues were fed to first-instar larvae of corn earworms, Helicoverpa zea (Boddie) and fall armyworms Spodoptera frugiperda (J.E. Smith) (Lepidoptera: Noctuidae), two sorghum major pests. Younger bmr leaves had significantly greater feeding damage in some assays than wild-type leaves, but older bmr6 leaves generally had significantly less damage than wild-type leaves. Caterpillars feeding on the bmr6 leaves often weighed significantly less than those feeding on wild-type leaves, especially in the S. frugiperda assays. Larvae fed the pith from bmr stalks had significantly higher mortality compared with those larvae fed on wild-type pith, which suggested that bmr pith was more toxic. Thus, reducing lignin content or changing subunit composition of bioenergy grasses does not necessarily increase their susceptibility to insects and may result in increased resistance, which would contribute to sustainable production. PMID:25601946

  13. Capacidade de parasitismo de Trichogramma exiguum Pinto & Platner, 1978 (Hymenoptera: Trichogrammatidae em ovos de Plutella xylostella (L., 1758 (Lepidoptera: Plutellidae em diferentes temperaturas Parasitism capacity of Trichogramma exiguum Pinto & Platner, 1978 (Hymenoptera: Trichogrammatidae on different temperatures on Plutella xylostella (L., 1758 (Lepidoptera: Plutellidae eggs

    Directory of Open Access Journals (Sweden)

    Fabricio Fagundes Pereira

    2007-04-01

    Full Text Available Estudou-se a capacidade de parasitismo de Trichogramma exiguum Pinto & Platner, 1978 (Hymenoptera: Trichogrammatidae em ovos de Plutella xylostella (L., 1758 (Lepidoptera: Plutellidae nas temperaturas de 18, 20, 22, 25, 28, 30 e 32°C, avaliando-se o número de ovos parasitados diariamente, a porcentagem acumulada de parasitismo, o número total de ovos parasitados por fêmea e a longevidade de fêmeas. O ritmo de parasitismo, durante as primeiras 24 horas, oscilou de 1,5 a 11,7 ovos parasitados por fêmeas de T. exiguum, nas temperaturas entre 18 e 32°C. O parasitismo acumulado de ovos de P. xylostella, nas temperaturas de 18, 20, 22, 25, 28, 30 e 32°C, atingiu 80%, respectivamente, aos 10, 7, 8, 5, 5, 4 e 5 dias, por T. exiguum. As maiores taxas de parasitismo obtidas por T. exiguum ocorreram nas faixas térmicas de 25, 30 e 32°C. A longevidade de fêmeas de T. exiguum, nas faixas térmicas compreendidas entre 18 e 32°C, variou de 4,2 a 7,4 dias.The parasitism capacity of Trichogramma exiguum Pinto & Platner, 1978 (Hymenoptera: Trichogrammatidae on eggs of Plutella xylostella (L., 1758 (Lepidoptera: Plutellidae was studied, under temperatures of 18, 20, 22, 25, 28, 30 and 32°C aiming at evaluating the number of days with parasitism, cumulated parasitism, total number of eggs parasited per female and their longevity. Parasitism during the first 24 hours ranged from 1.5 to 11.7 eggs of P. xylostella per T. exiguum female in the range of 18 to 32°C. Cumulated egg parasitism of P. xylostella by T. exiguum reached 80% after 10, 7, 8, 5, 5, 4 and 5 days at 18, 20, 22, 25, 28, 30 and 32°C. Higher parasitism rates were recorded at 25, 30 and 32°C while longevity of T. exiguum females varied from 4.2 to 7.4 days under temperatures of 18 to 32°C.

  14. Biologia e exigências térmicas de cinco linhagens de Trichogramma pretiosum Riley (Hymenoptera: Trichogrammatidae criadas em ovos de Tuta absoluta (Meyrick (Lepidoptera: Gelechiidae Biology and thermal requeriments of five Trichogramma pretiosum Riley (Hymenoptera: Trichogrammatidae strains, reared on eggs of Tuta absoluta (Meyrick (Lepidoptera: Gelechiidae

    Directory of Open Access Journals (Sweden)

    Dirceu Pratissoli

    2006-12-01

    Full Text Available O objetivo desta pesquisa foi estudar a biologia e as exigências térmicas de cinco linhagens de Trichogramma pretiosum Riley (Hymenoptera: Trichogrammatidae coletadas em áreas comerciais de tomate, no Estado do Espírito Santo, em ovos da traça-do-tomateiro Tuta absoluta (Meyrick (Lepidoptera: Gelechiidae, sob diferentes temperaturas constantes e flutuantes. A duração do ciclo de desenvolvimento (ovo-adulto das cinco linhagens de T. pretiosum criadas em ovos de T. absoluta foi afetada significativamente pela temperatura, na faixa das constantes (15 a 30°C. Esse mesmo fato não foi observado nas temperaturas alternadas (26/14 e 29/16°C. O desempenho das linhagens nas diferentes temperaturas mostrou que L2 e L5 apresentaram os melhores resultados quanto à taxa de emergência de seus descendentes. A razão sexual das cinco linhagens foi afetada pela temperatura, havendo diferença significativa entre os valores obtidos nas faixas das temperaturas (constante e alternada estudadas. As linhagens de T. pretiosum apresentaram uma temperatura base (tb que variou de 8,70 a 13,45°C, e uma constante térmica (K de 90,09 a 159,43 graus/dia.The objective of this research was to evaluate the biology and the thermal requeriments of five strains of Trichogramma pretiosum Riley (Hymenoptera: Trichogrammatidae collected in commercial areas of tomato, in Espírito Santo State, on eggs the tomato leafminer Tuta absoluta (Meyrick (Lepidoptera: Gelechiidae under constant and alternating temperatures. The duration of the development cycle (egg-adult of the five strains of T. pretiosum reared in eggs of T. absoluta was affected significantly by the temperature, in the band of the constants (15 to 30°C. This same fact was not observed in the alternated temperatures (26/14 and 29/16°C. The performance of the strains in the different temperatures, showed that L2 and L5 presented the best results concerning the emergency rate of their descendants of viability

  15. Abundance and temporal distribution of Gonioterma exquisita Duckworth (Lepidoptera, Elachistidae, Stenomatinae on Byrsonima pachyphylla Griseb. (Malpighiaceae in the Brazilian Cerrado Abundância e distribuição temporal de Gonioterma exquisita Duckworth (Lepidoptera, Elachistidae, Stenomatinae em Byrsonima pachyphylla Griseb. (Malpighiaceae no Cerrado brasileiro

    Directory of Open Access Journals (Sweden)

    Rosevaldo Pessoa-Queiroz

    2008-01-01

    Full Text Available The seasonal characteristics of the Cerrado region strongly influence food resource predictability and vegetal tissue nutritional content. The aims of this work were to record the abundance and temporal distribution of Gonioterma exquisita Duckworth, 1964 (Lepidoptera, Elachistidae and its relation with phenological, physical, and chemical traits of the host plant Byrsonima pachyphylla Griseb. (Malpighiaceae. Four nutritional quality parameters were determined for new and mature leaves: gross protein and nitrogen content, dry matter, and in vitro digestibility. We inspected 200 plants per month, searching for G. exquisita caterpillars. About 35.8% of the 2,400 plants inspected presented caterpillars, with an abundance peak in the wet season. Caterpillar abundance was positively correlated with mature leaf availability, their food resource. Although mature leaves presented lower gross protein and nitrogen contents than new leaves, this difference was small during the abundance peak of G. exquisita.As características sazonais da região do Cerrado influenciam fortemente a previsibilidade dos recursos alimentares no tempo e no espaço como também a qualidade nutricional dos tecidos vegetais. Os objetivos deste trabalho foram registrar a abundância e a distribuição temporal de Gonioterma exquisita Duckworth, 1964 (Lepidoptera, Elachistidae e sua relação com aspectos fenológicos, físicos e químicos de sua planta hospedeira, Byrsonima pachyphylla Griseb. (Malpighiaceae. Quatro parâmetros nutricionais foram determinados para folhas novas e maduras: proteína bruta, conteúdo de Nitrogênio, matéria seca e digestibilidade in vitro. Inspecionamos, mensalmente, 200 plantas a procura de lagartas de G. exquisita. Das 2.400 plantas inspecionadas, 35.8% apresentaram lagartas e seu pico de abundância ocorreu na estação chuvosa. A abundância de lagartas mostrou correlação positiva com a disponibilidade de folhas maduras, seu recurso alimentar

  16. A nomenclator of extant and fossil taxa of the Melanopsidae (Gastropoda, Cerithioidea).

    Science.gov (United States)

    Neubauer, Thomas A

    2016-01-01

    This nomenclator provides details on all published names in the family-, genus-, and species-group, as well as for a few infrasubspecific names introduced for, or attributed to, the family Melanopsidae. It includes nomenclaturally valid names, as well as junior homonyms, junior objective synonyms, nomina nuda, common incorrect subsequent spellings, and as far as possible discussion on the current status in taxonomy. The catalogue encompasses three family-group names, 79 genus-group names, and 1381 species-group names. All of them are given in their original combination and spelling (except mandatory corrections requested by the Code), along with their original source. For each family- and genus-group name, the original classification and the type genus and type species, respectively, are given. Data provided for species-group taxa are type locality, type horizon (for fossil taxa), and type specimens, as far as available.

  17. On the ancestral compatibility of two phylogenetic trees with nested taxa.

    Science.gov (United States)

    Llabrés, Mercè; Rocha, Jairo; Rosselló, Francesc; Valiente, Gabriel

    2006-09-01

    Compatibility of phylogenetic trees is the most important concept underlying widely-used methods for assessing the agreement of different phylogenetic trees with overlapping taxa and combining them into common supertrees to reveal the tree of life. The notion of ancestral compatibility of phylogenetic trees with nested taxa was recently introduced. In this paper we analyze in detail the meaning of this compatibility from the points of view of the local structure of the trees, of the existence of embeddings into a common supertree, and of the joint properties of their cluster representations. Our analysis leads to a very simple polynomial-time algorithm for testing this compatibility, which we have implemented and is freely available for download from the BioPerl collection of Perl modules for computational biology.

  18. New taxa, new records and name changes for southern African plants

    Directory of Open Access Journals (Sweden)

    G. E. Gibbs Russell

    1987-12-01

    Full Text Available Alterations for the year 1986 to the inventory maintained in PRECIS are reported for bryophytes, pteridophytes and monocotyledons, and for a few dicotyledons. For the cryptogams and monocots there are 77 newly described species or infraspecific taxa, 27 names brought back into use, and nine species newly reported for southern Africa, resulting in 113 additions to the total list of species. Five species were removed because they were mistakenly recorded from the area. Seventy-five names have gone into synonymy, there are 52 new combinations, and there are 35 orthographic corrections, resulting in 237 alterations to the list of species. The total of 355 additions, deletions and alterations represents about 5% of the total species and infraspecific taxa for the cryptogams and monocots.

  19. Lectotypification of names of Himalayan Brassicaceae taxa currently placed in the genus Cardamine

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    Karol Marhold

    2015-05-01

    Full Text Available Lectotypes of twenty-eight names of taxa currently recognized or synonymized in Cardamine are designated as part of the work on the account of the genus for the Pan-Himalayan Flora. Among them, the previous first-step lectotypification of the name C. calthifolia is finalized. In cases when specimen images are available online, stable identifiers for specimens, other permanent links, or links via JSTOR Global Plants are provided.

  20. Lectotypification of names of Himalayan Brassicaceae taxa currently placed in the genus Cardamine.

    Science.gov (United States)

    Marhold, Karol; Kempa, Matúš; Al-Shehbaz, Ihsan A

    2015-01-01

    Lectotypes of twenty-eight names of taxa currently recognized or synonymized in Cardamine are designated as part of the work on the account of the genus for the Pan-Himalayan Flora. Among them, the previous first-step lectotypification of the name Cardaminecalthifolia is finalized. In cases when specimen images are available online, stable identifiers for specimens, other permanent links, or links via JSTOR Global Plants are provided.

  1. Inter-taxa differences in extinction process of Maokouan (Middle Permian) fusulinaceans

    Institute of Scientific and Technical Information of China (English)

    2000-01-01

    Analyses of the extinction process of fusulinacean in the Maokouan (Middle Permian) biotic crisis have revealed remarkable differences between taxa with various morphological features. Nankinellinids suffered a heavy loss of species in the early stage of the Maokouan event. Schwagerinids and neoschwagerinids both showed a stepwise decrease in species diversity, but the pulses of species extinction occurred in different stages of the extinction process. The species extinction of verbeekinids happened primarily in the Late Maokouan.

  2. Immunological change in a parasite-impoverished environment: divergent signals from four island taxa.

    Directory of Open Access Journals (Sweden)

    Jon S Beadell

    Full Text Available Dramatic declines of native Hawaiian avifauna due to the human-mediated emergence of avian malaria and pox prompted an examination of whether island taxa share a common altered immunological signature, potentially driven by reduced genetic diversity and reduced exposure to parasites. We tested this hypothesis by characterizing parasite prevalence, genetic diversity and three measures of immune response in two recently-introduced species (Neochmia temporalis and Zosterops lateralis and two island endemics (Acrocephalus aequinoctialis and A. rimitarae and then comparing the results to those observed in closely-related mainland counterparts. The prevalence of blood parasites was significantly lower in 3 of 4 island taxa, due in part to the absence of certain parasite lineages represented in mainland populations. Indices of genetic diversity were unchanged in the island population of N. temporalis; however, allelic richness was significantly lower in the island population of Z. lateralis while both allelic richness and heterozygosity were significantly reduced in the two island-endemic species examined. Although parasite prevalence and genetic diversity generally conformed to expectations for an island system, we did not find evidence for a pattern of uniformly altered immune responses in island taxa, even amongst endemic taxa with the longest residence times. The island population of Z. lateralis exhibited a significantly reduced inflammatory cell-mediated response while levels of natural antibodies remained unchanged for this and the other recently introduced island taxon. In contrast, the island endemic A. rimitarae exhibited a significantly increased inflammatory response as well as higher levels of natural antibodies and complement. These measures were unchanged or lower in A. aequinoctialis. We suggest that small differences in the pathogenic landscape and the stochastic history of mutation and genetic drift are likely to be important in

  3. Nine endangered taxa, one recovering ecosystem: Identifying common ground for recovery on Santa Cruz Island, California

    Science.gov (United States)

    McEachern, A. Kathryn; Wilken, Dieter H.

    2011-01-01

    It is not uncommon to have several rare and listed taxa occupying habitats in one landscape or management area where conservation amounts to defense against the possibility of further loss. It is uncommon and extremely exciting, however, to have several listed taxa occupying one island that is managed cooperatively for conservation and recovery. On Santa Cruz Island, the largest of the northern California island group in the Santa Barbara Channel, we have a golden opportunity to marry ecological knowledge and institutional "good will" in a field test of holistic rare plant conservation. Here, the last feral livestock have been removed, active weed control is underway, and management is focused on understanding and demonstrating system response to conservation management. Yet funding limitations still exist and we need to plan the most fiscally conservative and marketable approach to rare plant restoration. We still experience the tension between desirable quick results and the ecological pace of system recovery. Therefore, our research has focused on identifying fundamental constraints on species recovery at individual, demographic, habitat, and ecosystem levels, and then developing suites of actions that might be taken across taxa and landscapes. At the same time, we seek a performance middle ground that balances an institutional need for quick demonstration of hands-on positive results with a contrasting approach that allows ecosystem recovery to facilitate species recovery in the long term. We find that constraints vary across breeding systems, life-histories, and island locations. We take a hybrid approach in which we identify several actions that we can take now to enhance population size or habitat occupancy for some taxa by active restoration, while allowing others to recover at the pace of ecosystem change. We make our recommendations on the basis of data we have collected over the last decade, so that management is firmly grounded in ecological observation.

  4. Peptide markers of aminoacyl tRNA synthetases facilitate taxa counting in metagenomic data

    Directory of Open Access Journals (Sweden)

    Persi Erez

    2012-02-01

    Full Text Available Abstract Background Taxa counting is a major problem faced by analysis of metagenomic data. The most popular method relies on analysis of 16S rRNA sequences, but some studies employ also protein based analyses. It would be advantageous to have a method that is applicable directly to short sequences, of the kind extracted from samples in modern metagenomic research. This is achieved by the technique proposed here. Results We employ specific peptides, deduced from aminoacyl tRNA synthetases, as markers for the occurrence of single genes in data. Sequences carrying these markers are aligned and compared with each other to provide a lower limit for taxa counts in metagenomic data. The method is compared with 16S rRNA searches on a set of known genomes. The taxa counting problem is analyzed mathematically and a heuristic algorithm is proposed. When applied to genomic contigs of a recent human gut microbiome study, the taxa counting method provides information on numbers of different species and strains. We then apply our method to short read data and demonstrate how it can be calibrated to cope with errors. Comparison to known databases leads to estimates of the percentage of novelties, and the type of phyla involved. Conclusions A major advantage of our method is its simplicity: it relies on searching sequences for the occurrence of just 4000 specific peptides belonging to the S61 subgroup of aaRS enzymes. When compared to other methods, it provides additional insight into the taxonomic contents of metagenomic data. Furthermore, it can be directly applied to short read data, avoiding the need for genomic contig reconstruction, and taking into account short reads that are otherwise discarded as singletons. Hence it is very suitable for a fast analysis of next generation sequencing data.

  5. Dominant plant taxa predict plant productivity responses to CO2 enrichment across precipitation and soil gradients

    Science.gov (United States)

    Fay, Philip A.; Newingham, Beth A.; Polley, H. Wayne; Morgan, Jack A.; LeCain, Daniel R.; Nowak, Robert S.; Smith, Stanley D.

    2015-01-01

    The Earth's atmosphere will continue to be enriched with carbon dioxide (CO2) over the coming century. Carbon dioxide enrichment often reduces leaf transpiration, which in water-limited ecosystems may increase soil water content, change species abundances and increase the productivity of plant communities. The effect of increased soil water on community productivity and community change may be greater in ecosystems with lower precipitation, or on coarser-textured soils, but responses are likely absent in deserts. We tested correlations among yearly increases in soil water content, community change and community plant productivity responses to CO2 enrichment in experiments in a mesic grassland with fine- to coarse-textured soils, a semi-arid grassland and a xeric shrubland. We found no correlation between CO2-caused changes in soil water content and changes in biomass of dominant plant taxa or total community aboveground biomass in either grassland type or on any soil in the mesic grassland (P > 0.60). Instead, increases in dominant taxa biomass explained up to 85 % of the increases in total community biomass under CO2 enrichment. The effect of community change on community productivity was stronger in the semi-arid grassland than in the mesic grassland, where community biomass change on one soil was not correlated with the change in either the soil water content or the dominant taxa. No sustained increases in soil water content or community productivity and no change in dominant plant taxa occurred in the xeric shrubland. Thus, community change was a crucial driver of community productivity responses to CO2 enrichment in the grasslands, but effects of soil water change on productivity were not evident in yearly responses to CO2 enrichment. Future research is necessary to isolate and clarify the mechanisms controlling the temporal and spatial variations in the linkages among soil water, community change and plant productivity responses to CO2 enrichment. PMID

  6. New taxa of angiosperms from coal-bearing continental deposits in Amur area

    Institute of Scientific and Technical Information of China (English)

    Tat'yana V. KEZINA

    2008-01-01

    Considered the question about stratigraphic position of coal-beating continental deposits of the Amur area, the main attention is paid to the definition of pollen of angiosperms. Khlonova (1960), Zaklinskaya (1963), Bratseva (1969) and other scientists reported a lot about the significance of the pollen. Among the new taxa the special interest represents the first description of Engelhardtia pollen of late Maestrichtian and Paleocene deposits. A new kind of pollen Vacuopollis triplicatus sp. nov. is described.

  7. Temporal consistency in background mortality of four dominant coral taxa along Australia's Great Barrier Reef

    Science.gov (United States)

    Pisapia, C.; Anderson, K. D.; Pratchett, M. S.

    2016-09-01

    Studies on the population and community dynamics of scleractinian corals typically focus on catastrophic mortality associated with acute disturbances (e.g., coral bleaching and outbreaks of crown-of-thorns starfish), though corals are subject to high levels of background mortality and injuries caused by routine and chronic processes. This study quantified prevalence (proportion of colonies with injuries) and severity (areal extent of injuries on individual colonies) of background mortality and injuries for four common coral taxa (massive Porites, encrusting Montipora, Acropora hyacinthus and branching Pocillopora) on the Great Barrier Reef, Australia. Sampling was conducted over three consecutive years during which there were no major acute disturbances. A total of 2276 adult colonies were surveyed across 27 sites, within nine reefs and three distinct latitudinal sectors. The prevalence of injuries was very high (>83%) across all four taxa, but highest for Porites (91%) and Montipora (85%). For these taxa ( Montipora and Pocillopora), there was also significant temporal and spatial variation in prevalence of partial mortality. The severity of injuries ranged from 3% to more than 80% and varied among coral taxa, but was fairly constant spatially and temporally. This shows that some injuries have considerable longevity and that corals may invest relatively little in regenerating tissue over sites of previous injuries. Inter-colony variation in the severity of injury also had no apparent effect on the realized growth of individual colonies, suggesting that energy diverted to regeneration has a limited bearing on overall energetic allocation, or impacts on other life-history processes (e.g., reproduction) rather than growth. Establishing background levels of injury and regeneration is important for understanding energy investment and life-history consequences for reef-building corals as well as for predicting susceptibility to, and capacity to recover from, acute

  8. Taxonomic significance of achene morphology of selected Rosa taxa (Rosaceae occurring in Poland

    Directory of Open Access Journals (Sweden)

    Andrzej M. Jagodziński

    2016-05-01

    Full Text Available Achenes of roses were rarely studied and the studies were focused on anatomical research, mainly on pericarp structure and its development. We investigated the achene morphology by light- and scanning electron microscopy (LM and SEM of 17 Rosa taxa from three sections (R. gallica from Gallicanae section, R. pendulina and R. rugosa from Rosa section, and R. agrestis, R. canina, R. canina var. corymbifera, R. dumalis, R. dumalis var. caesia, R. inodora, R. jundzillii, R. micrantha, R. rubiginosa, R. sherardii, R. ×subcanina, R. tomentosa, R. villosa, R. zalana from Caninae section. Eight quantitative and eight qualitative features were examined based on 9181 achenes, in total. Average achene size ranged from 4.37 to 5.39 mm in length and from 2.57 to 3.32 mm in width. The lowest morphological variability among the examined taxa was found in R. canina var. corymbifera, and the highest in R. gallica, R. inodora, and R. sherardii. The most diagnostic features of the achenes studied were suture (visible or invisible, presence or absence of hairs, hairs distribution and density, the exocarp sculpture and cuticle pattern type (we have distinguished four exocarp sculpture and three cuticle pattern types, and length. Qualitative achene features have significantly higher diagnostic value than quantitative ones. Taxonomical value of these features is quite high on the species and section level. Our study has shown that the previously mentioned morphological features of achenes can be used as valuable, additional diagnostic features in delimitation of Rosa taxa at the species and section level. Based on the morphological features of achenes, a determination key for all Rosa taxa studied was created.

  9. Vegetation stability and the habitat associations of the endemic taxa of the Olympic Peninsula, Washington, USA

    Directory of Open Access Journals (Sweden)

    Daniel G. Gavin

    2015-07-01

    Full Text Available Explanations for areas of endemism often involve relative climatic stability, or low climate velocity, over time scales ranging from the Pleistocene to the late Cenozoic. Given that many narrowly endemic taxa in forested landscapes display discrete habitat associations, habitat stability should be similarly important for endemic persistence. Furthermore, while past climate variability is exceedingly difficult to quantify on millennial time scales, past distributions of habitats may be robustly inferred from paleoecological records. The Olympic Peninsula, Washington, supports a biota with several insular features including 29 endemic plant and animal taxa. Here I present the geographic distribution and habitat of the endemic taxa, and then examine the vegetation stability of the past 14,300 years from five pollen records associated with discrete vegetation zones on the peninsula. I show that 11 endemics have distributions centered on dry alpine scree and rock in the northeastern quadrant of the peninsula, and nine occur in shaded riparian forests in the southwest. Vegetation turnover during the post-glacial period was smallest in these areas. However, another long pollen record from the western peninsula reveals existence of shrub tundra and greatly reduced forest cover, indicating southward displacement of shaded riparian habitats by perhaps as much as 100 km. Although this study supports an association of post-glacial vegetation stability with endemism, records spanning the glacial maximum indicate widespread tundra during long periods of the late Pleistocene and therefore suggest southern displacement of forest-associated endemics. While some of the alpine scree-associated endemics may have persisted in situ, many others likely arrived via a variety of dispersal trajectories. These histories include dispersal from southern refugia towards ocean barriers preventing further northward dispersal, contraction from more widespread distributions, and

  10. Notas sinonímicas sobre Hesperiidae neotropicais, com descrições de novos gêneros, espécies e subespécies (Lepidoptera

    Directory of Open Access Journals (Sweden)

    Olaf H. H. Mielke

    1990-01-01

    Full Text Available Celaenorrhinus shema mercedensis, ssp. n. de La Mercede e Rio Colorado, Peru e Cochabamba, Bolívia; Phocides pialia intermedia, ssp. n. de Minas Gerais, Brasil; Corticea diamantina, sp. n. de Minas Gerais, Brasil; Artines tobiasi sp. n. de Minas Gerais, Brasil; Cymaenes albiventris albiventris, sp. n. do Maranhão, Brasil; Cymaenes albiventris capixaba, ssp. n. do Espirito Santo, Brasil; Papias cascatona, sp. n. de Minas Geras, Brasil; Lerema caraca, sp. n. de Minas Gerais e Espirito Santo, Brasil; Vettius ploetzii morretesi, ssp. n. do Paraná e Rio Grande do Sul, Brasil Propapias, gen. n., tipo: Rhinthon proximus Bell, 1934, única espécie incluída. Celaenorrhinus songoensis saroma Evans, 1952, comb. n.; Celaenorrhinus songoensis tonio Evans, 1952, comb. n. Lerema duroca duroca (Ploetz, 1883, comb. n. e sp. rev. Lerema duroca lenta Evans, 1955, stat. n. Eumesia eburones inornata (Bell, 1937, comb. n. e stat. n., Eprius veleda obrepta (Kivirikko, 1936, comb. n. e stat. n., Phocides zancleius 1932 syn. n. de Phocides pialia (Hewitson, 1857; Dalla eburones elna Evans, 1955 syn. n. de Eumesia eburones inornata (Bell, 1937; Staphylus holaphegges Dyar, 1913 syn. n. de Eprius veleda veleda (Godman, 1901; Eprius veleda palta Evans, 1955 syn. n. de Eprius veleda obrepta (Kivirikko, 1936; Lerema elgina Schaus, 1902 syn. n. de Lerema duroca duroca (Ploetz, 1883. Dalla Mabille, 1904 syn. n. de Eumesia Felder &. Felder, 1867, n. rev, Eumesiinae Felder & Felder, 1867, n. rev.Celaenorrhinus shema mercedensis, ssp. n. from La Merced and Rio Colorado, Peru, and Cochabamba, Bolívia; Phocides pialia intermedia, ssp. n. from Minas Gerais, Brazil; Corticea diamantina, sp. n. from Minas Gerais, Brazil; Artines tobiasi, sp. n. from Minas Gerais, Brazil; Cymaenes albiventris albiventris, sp. n. from Maranhão, Brazil; Cymaenes albiventris capixaba, ssp. n. from Espírito Santo, Brazil; Papias cascatona, sp. n. from Minas Gerais, Brazil; Lerema caraca, sp. n. from Minas Gerais and Espírito Santo, Brazil; Vettius ploetzii morretesi, ssp. n. from Paraná and Rio Grande do Sul, Brazil Propapias, gen. n., type: Rhinthon proximus Bell, 1934, sole species included. Celaenorrhinus songoensis saroma Evans, 1952, comb n.; Celaenorrhinus songoensis tonio Evans, 1952, comb. n., Lerema duroca duroca (Ploetz, 1883, comb n. and sp. rev., Lerema duroca lenta Evans, 1955, stat. n., Eumesia eburones inornata (Bell, 1937, comb. n. and stat. n., Eprius veleda obrepta (Kivirikko, 1936, comb. n. and stat. n., Phocides zancleius Bell, 1932 syn. n. of Phocides pialia (Hewitson, 1857; Dalla eburones elna Evans, 1955; syn. n. of Eumesia eburones inornata (Bell, 1937; Staphylus holaphegges Dyar, 1913 syn. n. of Eprius veleda veleda (Godman, 1901; Eprius veleda palia Evans, 1955 syn. n. of Eprius veleda obrepta (Kivirikko, 1936; Lerema elgina Schaus, 1902 syn. n. of Lerema duroca duroca (Ploetz, 1883. Dalla Mabille, 1904 syn. n. of Eumesia Felder & Felder, 1867, n. rev. Eumesiinae Felder & Felder, 1867, n. rev.

  11. Entoloma subgenus Nolanea in the Netherlands and adjacent regions with a reconnaissance of its remaining taxa in Europe

    NARCIS (Netherlands)

    Noordeloos, M.E.

    1980-01-01

    Entoloma subgenus Nolanea (emend. Romagnesi 1978) is revised on account of personal observations and studies on collections from various herbaria. The types of European taxa, as far as they could be recovered, have been examined. Observations on extralimital taxa are included. The infrageneric

  12. Geographic analysis of Red List Rhododendron (Ericaceae) taxa by country of origin identifies priorities for ex situ conservation

    NARCIS (Netherlands)

    MacKay, M.B.; Gardiner, S.E.

    2017-01-01

    A Red List assessment is insufficient to determine priorities for ex situ conservation in large genera such as Rhododendron, where there may be hundreds of taxa in any one Red List category. We have utilised an analysis of the geographic origins of 1?215 taxa of Rhododendron (Ericaceae) as a method

  13. Entoloma subgenera Entoloma and Allocybe in the Netherlands and adjacent regions with a reconnaissance of their remaining taxa in Europe

    NARCIS (Netherlands)

    Noordeloos, M.E.

    1981-01-01

    Entoloma subgenera Entoloma and Allocybe are revised on account of personal observations and studies on collections from various herbaria. The types of European taxa, as far as they could be recovered, have been examined. Observations on extralimital taxa are included. The infrageneric

  14. The complete mitochondrial genome of the codling moth Cydia pomonella (Lepidoptera: Tortricidae).

    Science.gov (United States)

    Shi, Bao-Cai; Liu, Wei; Wei, Shu-Jun

    2013-02-01

    The complete mitochondrial genome of the codling moth Cydia pomonella (Lepidoptera: Tortricidae) was determined. The genome is 15,253 bp long with 37 typical animal mitochondrial genes and an A+T-rich region. All genes are arranged in their conserved positions compared with the pupative ancestral arrangement of insects except for trnM, which was translocated to the upstream of the transfer RNA cluster trnI-trnQ as in all previously reported lepidopteran mitochondiral genomes. Seven portein-coding genes use ATG start codon and five use ATT. However, the cox1 gene uses the CGA start codon as it is found in all previous reported mitochondrial genomes of Lepidoptera. Nine protein-coding genes stop with termination codon TAA. Four protein-coding genes use incomplete stop codons TA or T. The A+T region is located between rrnS and trnM with a length of 331 bp.

  15. Genes from scratch – the evolutionary fate of de novo genes

    Science.gov (United States)

    Schlötterer, Christian

    2015-01-01

    Although considered an extremely unlikely event, many genes emerge from previously noncoding genomic regions. This review covers the entire life cycle of such de novo genes. Two competing hypotheses about the process of de novo gene birth are discussed as well as the high death rate of de novo genes. Despite the high death rate, some de novo genes are retained and remain functional, even in distantly related species, through their integration into gene networks. Further studies combining gene expression with ribosome profiling in multiple populations across different species will be instrumental for an improved understanding of the evolutionary processes operating on de novo genes. PMID:25773713

  16. Genes from scratch--the evolutionary fate of de novo genes.

    Science.gov (United States)

    Schlötterer, Christian

    2015-04-01

    Although considered an extremely unlikely event, many genes emerge from previously noncoding genomic regions. This review covers the entire life cycle of such de novo genes. Two competing hypotheses about the process of de novo gene birth are discussed as well as the high death rate of de novo genes. Despite the high death rate, some de novo genes are retained and remain functional, even in distantly related species, through their integration into gene networks. Further studies combining gene expression with ribosome profiling in multiple populations across different species will be instrumental for an improved understanding of the evolutionary processes operating on de novo genes.

  17. Using computational fluid dynamics to test functional and ecological hypotheses in fossil taxa

    Science.gov (United States)

    Rahman, Imran

    2016-04-01

    Reconstructing how ancient organisms moved and fed is a major focus of study in palaeontology. Traditionally, this has been hampered by a lack of objective data on the functional morphology of extinct species, especially those without a clear modern analogue. However, cutting-edge techniques for characterizing specimens digitally and in three dimensions, coupled with state-of-the-art computer models, now provide a robust framework for testing functional and ecological hypotheses even in problematic fossil taxa. One such approach is computational fluid dynamics (CFD), a method for simulating fluid flows around objects that has primarily been applied to complex engineering-design problems. Here, I will present three case studies of CFD applied to fossil taxa, spanning a range of specimen sizes, taxonomic groups and geological ages. First, I will show how CFD enabled a rigorous test of hypothesized feeding modes in an enigmatic Ediacaran organism with three-fold symmetry, revealing previously unappreciated complexity of pre-Cambrian ecosystems. Second, I will show how CFD was used to evaluate hydrodynamic performance and feeding in Cambrian stem-group echinoderms, shedding light on the probable feeding strategy of the latest common ancestor of all deuterostomes. Third, I will show how CFD allowed us to explore the link between form and function in Mesozoic ichthyosaurs. These case studies serve to demonstrate the enormous potential of CFD for addressing long-standing hypotheses for a variety of fossil taxa, opening up an exciting new avenue in palaeontological studies of functional morphology.

  18. Darwin's diagram of divergence of taxa as a causal model for the origin of species.

    Science.gov (United States)

    Bouzat, Juan L

    2014-03-01

    On the basis that Darwin's theory of evolution encompasses two logically independent processes (common descent and natural selection), the only figure in On the Origin of Species (the Diagram of Divergence of Taxa) is often interpreted as illustrative of only one of these processes: the branching patterns representing common ancestry. Here, I argue that Darwin's Diagram of Divergence of Taxa represents a broad conceptual model of Darwin's theory, illustrating the causal efficacy of natural selection in producing well-defined varieties and ultimately species. The Tree Diagram encompasses the idea that natural selection explains common descent and the origin of organic diversity, thus representing a comprehensive model of Darwin's theory on the origin of species. I describe Darwin's Tree Diagram in relation to his argumentative strategy under the vera causa principle, and suggest that the testing of his theory based on the evidence from the geological record, the geographical distribution of organisms, and the mutual affinities of organic beings can be framed under the hypothetico-deductive method. Darwin's Diagram of Divergence of Taxa therefore represents a broad conceptual model that helps understanding the causal construction of Darwin's theory of evolution, the structure of his argumentative strategy, and the nature of his scientific methodology.

  19. Morphological variations of genus Alnus in Iran: assessment of five new taxa

    Directory of Open Access Journals (Sweden)

    Fatemeh Shayanmehr

    2014-04-01

    Full Text Available The genus Alnus has two species in old references of the flora of Iran in which two varieties and one subspecies have been recorded. However, recently, five new taxa have been described and recorded for the flora of Iran. In this study, the herbarium samples were obtained during a widespread sampling from 25 stands, ranged from the most eastern limit of alder dispersion in Golestan to the west of Talish, across the plains and highlands of Hyrcanian forests. After sampling, 28 leaf and female cone morphological traits belonging to 140 alder individuals were measured and analyzed. The results of discriminant analysis showed 11 most important traits in differentiation of the taxa such as leaf angle in apex, blade shape at the base, type of serration, villosity intensity, presence of hairs on the upper surface of leaf and cone shape. In this analysis, 84.3% of recognized individuals were correctly grouped in the related taxon. The maximum disagreement between predicted and recognized groups corresponded to allocation of A. subcordata varieties to villosa and visc versa. Generally, the morphological traits of the two new species including A. dolichocarpa and A. djavanshirii were very similar to that of A. subcordata var. subcordata. While, three sub-species of A. glutinosa were distinguished by the same traits. Finally, the use of DNA barcoding techniques is suggested in order to verify the presence of new taxa in Iran.

  20. Undersampling Taxa Will Underestimate Molecular Divergence Dates: An Example from the South American Lizard Clade Liolaemini

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    James A. Schulte

    2013-01-01

    Full Text Available Methods for estimating divergence times from molecular data have improved dramatically over the past decade, yet there are few studies examining alternative taxon sampling effects on node age estimates. Here, I investigate the effect of undersampling species diversity on node ages of the South American lizard clade Liolaemini using several alternative subsampling strategies for both time calibrations and taxa numbers. Penalized likelihood (PL and Bayesian molecular dating analyses were conducted on a densely sampled (202 taxa mtDNA-based phylogenetic hypothesis of Iguanidae, including 92 Liolaemini species. Using all calibrations and penalized likelihood, clades with very low taxon sampling had node age estimates younger than clades with more complete taxon sampling. The effect of Bayesian and PL methods differed when either one or two calibrations only were used with dense taxon sampling. Bayesian node ages were always older when fewer calibrations were used, whereas PL node ages were always younger. This work reinforces two important points: (1 whenever possible, authors should strongly consider adding as many taxa as possible, including numerous outgroups, prior to node age estimation to avoid considerable node age underestimation and (2 using more, critically assessed, and accurate fossil calibrations should yield improved divergence time estimates.

  1. Hair types in Polish selected taxa of Potentilla subsect. Collinae (Rosaceae

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    Jeremi Kołodziejek

    2011-01-01

    Full Text Available Leaf hair types in Polish selected taxa from Potentilla subsect. Collinae Juz., i.e. P. collina Wibel s.str., P. silesiaca Uechtr. P. thyrsiflora Hillsen ex Zimmeter, P. wimanniana Gilnther and Schummel, P. leucopolitana P.J. Milller and P. leucopolitana P.J. Milller x P. incana P. Graebner were studied. A total of five unicellular hair types could be distinguished, based on the structure of the hair: straight, involuted, crispate, curved and stellate. The occurrence of involuted, curved and stellate hairs was observed for the first time for the majority of investigated taxa. There is a variation in density, position, as well as in the number of arms of stellate hairs. Although they are difficult to see without a stereo microscope, these differences seem to be systematically important. The study of hair types on surfaces of leaves supports the opinion that P. collina s.lato is a hybrid between P. argentea L. s.la-to, P. tabernaemontani Ascherson and P. incana P. Gaertner. Hairs form consistent characters which are highly suited for systematic purposes. The key to Polish taxa based on leaf hair types is given as well.

  2. Some extinct plant taxa on the territory of Novi Sad and their vulnerability status in Vojvodina and Serbia

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    Đakić Žarko S.

    2012-01-01

    Full Text Available Natural habitats on the territory of Novi Sad are almost fully destroyed today, as well as their characteristic plant taxa. The reason for disappearance of natural habitats is the development of suburban communities, which is an irreversible process. Plant taxa, specific for wet, salty, and sandy ecosystems grew on those habitats twenty years ago and earlier. This paper presents the overview of 9 taxa (Suaeda maritima subsp. maritima, Androsace elongata subsp. elongata, Cirsium boujartii subsp. boujartii, Aster sedifolius subsp. canus, Blackstonia perfoliata subsp. serotina, Plantago maritima subsp. maritima, Salvia nutans, Allium angulosum, and Typha schuttleworthii. These taxa presented integral parts of autochthonous flora of Novi Sad. Since some of these taxa were found in the field 21 years ago and some even 93 years ago, they are extinct from the flora of Novi Sad.

  3. Diversity and dynamics of dominant and rare bacterial taxa in replicate sequencing batch reactors operated under different solids retention time

    KAUST Repository

    Bagchi, Samik

    2014-10-19

    In this study, 16S rRNA gene pyrosequencing was applied in order to provide a better insight on the diversity and dynamics of total, dominant, and rare bacterial taxa in replicate lab-scale sequencing batch reactors (SBRs) operated at different solids retention time (SRT). Rank-abundance curves showed few dominant operational taxonomic units (OTUs) and a long tail of rare OTUs in all reactors. Results revealed that there was no detectable effect of SRT (2 vs. 10 days) on Shannon diversity index and OTU richness of both dominant and rare taxa. Nonmetric multidimensional scaling analysis showed that the total, dominant, and rare bacterial taxa were highly dynamic during the entire period of stable reactor performance. Also, the rare taxa were more dynamic than the dominant taxa despite expected low invasion rates because of the use of sterile synthetic media.

  4. An updated and annotated checklist of the Hedylidae and Hesperiidae (Lepidoptera) of Trinidad, West Indies

    OpenAIRE

    COCK, Matthew J. W.

    2014-01-01

    A revised checklist for the butterfl y families Hedylidae and Hesperiidae (Lepidoptera) of Trinidad (Trinidad and Tobago) is presented, bringing nomenclature in line with modern usage, and indicating synonyms from earlier lists and papers. The following are new records for Trinidad: Thessia athesis (Hewitson), Bungalotis clusia Evans, Sarmientoia eriopis (Hewitson), Pellicia tyana toza Evans, Quadrus contubernalis contubernalis (Mabille) and Decinea decinea derisor (Mabille). The checklist in...

  5. Taxonomic review of the tribe Junoniini (Lepidoptera: Nymphalidae: Nymphalinae from Myanmar

    Directory of Open Access Journals (Sweden)

    Nan Zarchi Win

    2016-09-01

    Full Text Available This paper provides keys to the genera and species for the butterfly species belonging to the tribe Junoniini (Lepidoptera: Nymphalidae from Myanmar. Species accounts include taxonomic description, synonymic lists, distributional ranges, and adult illustrations of nine species: Junonia hierta (Fabricius, Junonia orithya (Linnaeus, Junonia almana (Linnaeus, Junonia lemonias (Linnaeus, Junonia atlites (Linnaeus, Junonia iphita (Cramer, Yoma sabina (Cramer, Hypolimnas bolina (Linnaeus, and Hypolimnas misippus (Linnaeus.

  6. Lepidoptera and associated parasitoids attacking Hass and non-Hass avocados in Guatemala.

    Science.gov (United States)

    Hoddle, Mark S; Hoddle, Christina D

    2008-08-01

    A 5-mo survey for fruit feeding Lepidoptera attacking Hass and non-Hass avocados (Persea americana Miller [Lauraceae]) was conducted in Guatemala from 1 November 2006 to 1 April 2007. In total, 6,740 fruit were collected from 22 different areas in Guatemala. Eight species of Lepidoptera, of which at least two are species new to science, were reared from avocado fruit. Reared Lepidoptera were Amorbia santamaria Phillips and Powell, Cryptaspasma sp. nr. lugubris, Euxoa sorella Schaus, Histura n. sp., Holcocera n. sp., Micrathetis triplex Walker, Netechma pyrrhodelta (Meyrick), and Stenoma catenifer Walsingham. Hymenopteran parasitoids were reared from larvae of C. sp. nr. lugubris and S. catenifer. One species of parasitoid, Pseudophanerotoma sp., was reared from field collected C. sp. nr. lugubris larvae. The dominant parasitoid reared from S. catenifer was a gregarious Apanteles sp. Other parasitoid species reared from S. catenifer larvae were Brachycyrtus sp., Macrocentrus sp., and Pristomerus sp. The oviposition preference of C. sp. nr. lugubris for avocado fruit hanging in trees, dropped fruit on the ground, or exposed avocado seeds was investigated by studying the oviposition preferences of adult female moths and determining egg hatch times in the laboratory, and by investigating the longevity of avocado fruit on the ground under prevailing field conditions. Together, data from these studies suggested that C. sp. nr. lugubris may be an unrecognized pest of avocados that causes hanging fruit to drop to the ground prematurely. The influence of season and altitude on the phenology and distribution of avocado feeding Lepidoptera in Guatemala is discussed.

  7. Imaturos de Sarsina violascens (Herrich-Schäffer (Lepidoptera, Noctuidae, Lymantriinae

    Directory of Open Access Journals (Sweden)

    Marina Moraes C.

    2010-01-01

    Full Text Available Imaturos de Sarsina violascens (Herrich-Schäffer (Lepidoptera, Noctuidae, Lymantriinae. Sarsina violascens é uma espécie polífaga que eventualmente se alimenta de P. cattleianum Sabine (Myrtaceae durante sua fase larval. Neste estudo são descritas a morfologia e o comportamento dos imaturos, com ilustrações, fotografias e imagens de microscopia eletrônica de varredura.

  8. Fund af småsommerfugle fra Danmark i 2011 (Lepidoptera)

    DEFF Research Database (Denmark)

    Buhl, Otto; Falck, Per; Karsholt, Ole

    2012-01-01

    This article reports and comments on interesting Danish Microlepidoptera collected in 2011 and include remarkable findings from previous years. The classification and nomenclature follow the new Danish checklist (Karsholt & Stadel Nielsen, in press). Ten species are reported as new to the Danish ...... the number of Danish Lepidoptera to a total of 2551 species. There are moreover 10 species on the so-called observation list, containing species of uncertain status, which was erected in 2009....

  9. Sexual differences in weight loss upon eclosion are related to life history strategy in Lepidoptera.

    Science.gov (United States)

    Molleman, Freerk; Javoiš, Juhan; Esperk, Toomas; Teder, Tiit; Davis, Robert B; Tammaru, Toomas

    2011-06-01

    Given that immature and adult insects have different life styles, different target body compositions can be expected. For adults, such targets will also differ depending on life history strategy, and thus vary among the sexes, and in females depend on the degree of capital versus income breeding and ovigeny. Since these targets may in part be approximated by loss of substances upon eclosion, comparing sexual differences in such losses upon eclosion among species that differ in life history would provide insights into insect functional ecology. We studied weight loss in eclosing insects using original data on pupal and adult live weights of 38 species of Lepidoptera (mainly Geometridae) and further literature data on 15 species of Lepidoptera and six representatives of other insect orders, and applied the phylogenetic independent contrasts approach. In addition, data on live and dry weights of pupae of four species of Lepidoptera are presented. We documented that Lepidoptera typically lose a large proportion (20-80%) of their pupal weight upon adult eclosion. Sexual differences in weight loss varied between absent and strongly male biased. Most of the weight loss was water loss, and sexual differences in adult water content correlate strongly with differences in weight loss. Using feeding habits (feeds or does not feed as an adult) and female biased sexual size dimorphism as measures of degree of capital breeding, we found that the difference among the sexes in weight loss tends to be more pronounced in capital breeding species. Additionally, females of more pro-ovigenic species (large proportion of eggs mature upon emergence) tend to have higher water contents. Our results suggests that metamorphosis is generally facilitated by a high water content, while adults excrete water upon eclosion to benefit flight unless water has been allocated to eggs, or is treated as a capital resource for adult survival or future allocation to eggs.

  10. The complete mitochondrial genome of the fall webworm, Hyphantria cunea (Lepidoptera: Arctiidae).

    Science.gov (United States)

    Liao, Fang; Wang, Lin; Wu, Song; Li, Yu-Ping; Zhao, Lei; Huang, Guo-Ming; Niu, Chun-Jing; Liu, Yan-Qun; Li, Ming-Gang

    2010-03-29

    The complete mitochondrial genome (mitogenome) of the fall webworm, Hyphantria cunea (Lepidoptera: Arctiidae) was determined. The genome is a circular molecule 15 481 bp long. It presents a typical gene organization and order for completely sequenced lepidopteran mitogenomes, but differs from the insect ancestral type for the placement of tRNA(Met). The nucleotide composition of the genome is also highly A + T biased, accounting for 80.38%, with a slightly positive AT skewness (0.010), indicating the occurrence of more As than Ts, as found in the Noctuoidea species. All protein-coding genes (PCGs) are initiated by ATN codons, except for COI, which is tentatively designated by the CGA codon as observed in other lepidopterans. Four of 13 PCGs harbor the incomplete termination codon, T or TA. All tRNAs have a typical clover-leaf structure of mitochondrial tRNAs, except for tRNA(Ser)(AGN), the DHU arm of which could not form a stable stem-loop structure. The intergenic spacer sequence between tRNA(Ser)(AGN) and ND1 also contains the ATACTAA motif, which is conserved across the Lepidoptera order. The H. cunea A+T-rich region of 357 bp is comprised of non-repetitive sequences, but harbors several features common to the Lepidoptera insects, including the motif ATAGA followed by an 18 bp poly-T stretch, a microsatellite-like (AT)(8) element preceded by the ATTTA motif, an 11 bp poly-A present immediately upstream tRNA(Met). The phylogenetic analyses support the view that the H. cunea is closerly related to the Lymantria dispar than Ochrogaster lunifer, and support the hypothesis that Noctuoidea (H. cunea, L. dispar, and O. lunifer) and Geometroidea (Phthonandria atrilineata) are monophyletic. However, in the phylogenetic trees based on mitogenome sequences among the lepidopteran superfamilies, Papillonoidea (Artogeia melete, Acraea issoria, and Coreana raphaelis) joined basally within the monophyly of Lepidoptera, which is different to the traditional classification.

  11. The 'taygetis Ypthima Species Group' (lepidoptera, Nymphalidae, Satyrinae): Taxonomy, Variation And Description Of A New Species.

    OpenAIRE

    Ricardo Siewert; Thamara Zacca; Fernando Dias; André Freitas; Olaf Mielke; Mirna Casagrande

    2013-01-01

    A new species of Taygetis Hübner, [1819] (Lepidoptera, Nymphalidae, Satyrinae) from southeastern Brazil is described: Taygetis drogoni sp. n. In addition, T. servius Weymer, 1910 and T. fulginia d’Almeida, 1922 are resurrected from synonymy and a taxonomic discussion on the species T. ypthima Hübner, [1821] and T. rectifascia Weymer, 1907 is provided. A dichotomous key for the species is also provided.

  12. The taxonomic placement and provenance of Hypopyra inconspicua Herrich-Schäffer (Lepidoptera, Thyrididae

    Directory of Open Access Journals (Sweden)

    Vitor O. Becker

    2011-03-01

    Full Text Available The taxonomic placement and provenance of Hypopyra inconspicua Herrich-Schäffer (Lepidoptera, Thyrididae. Tanyodes inconspicua (Herrich-Schäffer comb. nov. is transferred from Spirama Guenée (Noctuidae, Catocalinae to Striglininae (Thyrididae, as a senior synonym of Ortogramma rufitibia R. Felder & Rogenhofer syn. nov. and Tanyodes ochracea Möschler syn. nov., and from the African to the Neotropical fauna.

  13. Edible Lepidoptera in Mexico: Geographic distribution, ethnicity, economic and nutritional importance for rural people

    OpenAIRE

    Oliva-Rivera Héctor; Landero Ivonne; Vázquez Adolfo I; Moreno José MP; Ramos-Elorduy Julieta; Camacho Víctor HM

    2011-01-01

    Abstract In this paper, we reported the butterflies and moths that are consumed in Mexico. We identified 67 species of Lepidoptera that are eaten principally in their larval stage in 17 states of Mexico. These species belong to 16 families: Arctiidae, Bombycidae, Castniidae, Cossidae, Geometridae, Hepialidae, Hesperiidae, Lasiocampidae, Noctuidae, Nymphalidae, Papilionidae, Pieridae, Pyralidae, Saturniidae, Sesiidae, and Sphingidae. Saturniidae, Pieridae, Noctuidae and Nymphalidae were the mo...

  14. Uji Efektifitas Ekstrak Daun Mengkudu Terhadap Hama Kubis Plutella xylostella L. (Lepidoptera: Plutellidae) di Laboratorium

    OpenAIRE

    Purba, Sardes

    2009-01-01

    Uji Efektifitas Ekstrak Daun Mengkudu Terhadap Hama Kubis Plutella xylostella L. (Lepidoptera: Plutellidae) di Laboratorium dibimbing oleh Ir. Marheni MP., dan Ir. Erwin Maa’aruf, MS. Selaku ketua dan anggota. Penelitian ini bertujuan untuk mengetahui efektifitas instektisida botanis Mengkudu terhadap hama kubis P.xylostella di Laboratorium. Penelitian dilaksanakan di Laboratorium PHP BPTPH Medan Johor, Sumatera Utara yang dimulai pada bulan April 2007 sampai Juli 2007. Penelitian meng...

  15. A new species of Herpetogramma (Lepidoptera, Crambidae, Spilomelinae) from eastern North America.

    Science.gov (United States)

    Handfield, Louis; Handfield, Daniel

    2011-01-01

    Herpetogramma sphingealissp. n., a new species of Crambidae (Lepidoptera), is described from Québec, Canada. The species is included in the genus Herpetogramma Led., 1863, a genus in the subfamily Spilomelinae. Adults and genitalia of this species are described and illustrated, as well as those of Herpetogramma aeglealis (Walker, 1859) and Herpetogramma thestealis (Walker, 1859), and adults of the semi-melanic form of Herpetogramma aeglealis are illustrated.

  16. A new species of Herpetogramma (Lepidoptera, Crambidae, Spilomelinae from eastern North America

    Directory of Open Access Journals (Sweden)

    Louis Handfield

    2011-11-01

    Full Text Available Herpetogramma sphingealis sp. n., a new species of Crambidae (Lepidoptera, is described from Québec, Canada. The species is included in the genus Herpetogramma Led., 1863, a genus in the subfamily Spilomelinae. Adults and genitalia of this species are described and illustrated, as well as those of H. aeglealis (Walker, 1859 and H. thestealis (Walker, 1859, and adults of the semi-melanic form of H. aeglealis are illustrated.

  17. Low host specificity and abundance of frugivorous lepidoptera in the lowland rain forests of Papua New Guinea

    Science.gov (United States)

    Ctvrtecka, Richard; Miller, Scott E.; Rosati, Margaret E.; Molem, Kenneth; Damas, Kipiro; Gewa, Bradley; Novotny, Vojtech

    2017-01-01

    We studied a community of frugivorous Lepidoptera in the lowland rainforest of Papua New Guinea. Rearing revealed 122 species represented by 1,720 individuals from 326 woody plant species. Only fruits from 52% (171) of the plant species sampled were attacked. On average, Lepidoptera were reared from 1 in 89 fruits and a kilogram of fruit was attacked by 1.01 individuals. Host specificity of Lepidoptera was notably low: 69% (33) of species attacked plants from >1 family, 8% (4) fed on single family, 6% (3) on single genus and 17% (8) were monophagous. The average kilogram of fruits was infested by 0.81 individual from generalist species (defined here as feeding on >1 plant genus) and 0.07 individual from specialist species (feeding on a single host or congeneric hosts). Lepidoptera preferred smaller fruits with both smaller mesocarp and seeds. Large-seeded fruits with thin mesocarp tended to host specialist species whereas those with thick, fleshy mesocarp were often infested with both specialist and generalist species. The very low incidence of seed damage suggests that pre-dispersal seed predation by Lepidoptera does not play a major role in regulating plant populations via density-dependent mortality processes outlined by the Janzen-Connell hypothesis. PMID:28231249

  18. Análise do impacto das taxas de juros no desempenho financeiro dos bancos brasileiros

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    Marcus Vinicius Moreira Zittei

    2016-05-01

    Full Text Available A rentabilidade dos bancos é geralmente considerada um fator relevante para garantir a solidez do sistema financeiro, reduzindo os riscos associados aos eventos de insolvência nesse setor. No Brasil, há discussões quanto aos lucros das instituições financeiras que atuam no país, centradas no argumento de que tais lucros seriam supostamente muito elevados, onerando demasiadamente o setor produtivo. As instituições bancárias incorporaram processos como forma de adequação ao mercado. Um desses processos é a taxa de juros que representa a remuneração adicional ao capital emprestado, de forma que mantenha a valorização econômica da moeda, com inferência direta pela variação do tempo na atividade de crédito. Este estudo busca analisar o impacto das taxas de juros no desempenho financeiro dos bancos brasileiros. Os dados extraídos compreenderam os períodos de 2009 a 2012 de nove instituições bancárias, que representam 64% dos maiores bancos. Para a coleta dos dados, foi utilizado o sistema de informações cadastrais e contábeis do Banco Central do Brasil e o sistema de informações sobre operações bancárias do Banco Central do Brasil. Os resultados, apurados com o uso da metodologia de dados em regressão linear múltipla e testes não paramétricos demonstram, inicialmente, que a taxa de juros tem forte relação com o lucro líquido de todas as instituições, na medida em que tem uma oscilação na taxa juros, e, consequentemente, terá no lucro. Assim, foram obtidas evidências de que as taxas de juros implicam rentabilidade no setor bancário nacional.

  19. Recurrent Domestication by Lepidoptera of Genes from Their Parasites Mediated by Bracoviruses.

    Directory of Open Access Journals (Sweden)

    Laila Gasmi

    2015-09-01

    Full Text Available Bracoviruses are symbiotic viruses associated with tens of thousands of species of parasitic wasps that develop within the body of lepidopteran hosts and that collectively parasitize caterpillars of virtually every lepidopteran species. Viral particles are produced in the wasp ovaries and injected into host larvae with the wasp eggs. Once in the host body, the viral DNA circles enclosed in the particles integrate into lepidopteran host cell DNA. Here we show that bracovirus DNA sequences have been inserted repeatedly into lepidopteran genomes, indicating this viral DNA can also enter germline cells. The original mode of Horizontal Gene Transfer (HGT unveiled here is based on the integrative properties of an endogenous virus that has evolved as a gene transfer agent within parasitic wasp genomes for ≈100 million years. Among the bracovirus genes thus transferred, a phylogenetic analysis indicated that those encoding C-type-lectins most likely originated from the wasp gene set, showing that a bracovirus-mediated gene flux exists between the 2 insect orders Hymenoptera and Lepidoptera. Furthermore, the acquisition of bracovirus sequences that can be expressed by Lepidoptera has resulted in the domestication of several genes that could result in adaptive advantages for the host. Indeed, functional analyses suggest that two of the acquired genes could have a protective role against a common pathogen in the field, baculovirus. From these results, we hypothesize that bracovirus-mediated HGT has played an important role in the evolutionary arms race between Lepidoptera and their pathogens.

  20. Assessing the Value of DNA Barcodes and Other Priority Gene Regions for Molecular Phylogenetics of Lepidoptera

    Science.gov (United States)

    Wilson, John James

    2010-01-01

    Background Despite apparently abundant amounts of observable variation and species diversity, the order Lepidoptera exhibits a morphological homogeneity that has provided only a limited number of taxonomic characters and led to widespread use of nucleotides for inferring relationships. This study aims to characterize and develop methods to quantify the value of priority gene regions designated for Lepidoptera molecular systematics. In particular, I assess how the DNA barcode segment of the mitochondrial COI gene performs across a broad temporal range given its number one position of priority, most sequenced status, and the conflicting opinions on its phylogenetic performance. Methodology/Principal Findings Gene regions commonly sequenced for Lepidoptera phylogenetics were scored using multiple measures across three categories: practicality, which includes universality of primers and sequence quality; phylogenetic utility; and phylogenetic signal. I found that alternative measures within a category often appeared correlated, but high scores in one category did not necessarily translate into high scores in another. The DNA barcode was easier to sequence than other genes, and had high scores for utility but low signal above the genus level. Conclusions/Significance Given limited financial resources and time constraints, careful selection of gene regions for molecular phylogenetics is crucial to avoid wasted effort producing partially informative data. This study introduces an approach to assessing the value of gene regions prior to the initiation of new studies and presents empirical results to help guide future selections. PMID:20479871

  1. Assessing the value of DNA barcodes and other priority gene regions for molecular phylogenetics of Lepidoptera.

    Directory of Open Access Journals (Sweden)

    John James Wilson

    Full Text Available BACKGROUND: Despite apparently abundant amounts of observable variation and species diversity, the order Lepidoptera exhibits a morphological homogeneity that has provided only a limited number of taxonomic characters and led to widespread use of nucleotides for inferring relationships. This study aims to characterize and develop methods to quantify the value of priority gene regions designated for Lepidoptera molecular systematics. In particular, I assess how the DNA barcode segment of the mitochondrial COI gene performs across a broad temporal range given its number one position of priority, most sequenced status, and the conflicting opinions on its phylogenetic performance. METHODOLOGY/PRINCIPAL FINDINGS: Gene regions commonly sequenced for lepidoptera phylogenetics were scored using multiple measures across three categories: practicality, which includes universality of primers and sequence quality; phylogenetic utility; and phylogenetic signal. I found that alternative measures within a category often appeared correlated, but high scores in one category did not necessarily translate into high scores in another. The DNA barcode was easier to sequence than other genes, and had high scores for utility but low signal above the genus level. CONCLUSIONS/SIGNIFICANCE: Given limited financial resources and time constraints, careful selection of gene regions for molecular phylogenetics is crucial to avoid wasted effort producing partially informative data. This study introduces an approach to assessing the value of gene regions prior to the initiation of new studies and presents empirical results to help guide future selections.

  2. The case for a generic phytosanitary irradiation dose of 250 Gy for Lepidoptera eggs and larvae

    Science.gov (United States)

    Hallman, Guy J.; Arthur, Valter; Blackburn, Carl M.; Parker, Andrew G.

    2013-08-01

    The literature on ionizing irradiation of Lepidoptera is critically examined for a dose that could serve as a generic phytosanitary treatment for all eggs and larvae of that order, which contains many quarantine pests that inhibit trade in fresh agricultural commodities. The measure of efficacy used in deriving this dose is the prevention of emergence of normal-looking adults that are assumed not able to fly. A dose of 250 Gy is supported by many studies comprising 34 species in 11 lepidopteran families, including those of significant quarantine importance. Two studies with two different species found that doses >250 Gy were necessary, but both of these are contradicted by other studies showing that 10,000 individuals) testing for families other than Tortricidae (the most important quarantine family in the Lepidoptera). Because several large-scale studies have been done with tortricids a dose of 250 Gy could be justifiable for Tortricidae if it is not acceptable for the entire Lepidoptera at this time.

  3. Recurrent Domestication by Lepidoptera of Genes from Their Parasites Mediated by Bracoviruses.

    Science.gov (United States)

    Gasmi, Laila; Boulain, Helene; Gauthier, Jeremy; Hua-Van, Aurelie; Musset, Karine; Jakubowska, Agata K; Aury, Jean-Marc; Volkoff, Anne-Nathalie; Huguet, Elisabeth; Herrero, Salvador; Drezen, Jean-Michel

    2015-09-01

    Bracoviruses are symbiotic viruses associated with tens of thousands of species of parasitic wasps that develop within the body of lepidopteran hosts and that collectively parasitize caterpillars of virtually every lepidopteran species. Viral particles are produced in the wasp ovaries and injected into host larvae with the wasp eggs. Once in the host body, the viral DNA circles enclosed in the particles integrate into lepidopteran host cell DNA. Here we show that bracovirus DNA sequences have been inserted repeatedly into lepidopteran genomes, indicating this viral DNA can also enter germline cells. The original mode of Horizontal Gene Transfer (HGT) unveiled here is based on the integrative properties of an endogenous virus that has evolved as a gene transfer agent within parasitic wasp genomes for ≈100 million years. Among the bracovirus genes thus transferred, a phylogenetic analysis indicated that those encoding C-type-lectins most likely originated from the wasp gene set, showing that a bracovirus-mediated gene flux exists between the 2 insect orders Hymenoptera and Lepidoptera. Furthermore, the acquisition of bracovirus sequences that can be expressed by Lepidoptera has resulted in the domestication of several genes that could result in adaptive advantages for the host. Indeed, functional analyses suggest that two of the acquired genes could have a protective role against a common pathogen in the field, baculovirus. From these results, we hypothesize that bracovirus-mediated HGT has played an important role in the evolutionary arms race between Lepidoptera and their pathogens.

  4. RNA interference in Lepidoptera: an overview of successful and unsuccessful studies and implications for experimental design.

    Science.gov (United States)

    Terenius, Olle; Papanicolaou, Alexie; Garbutt, Jennie S; Eleftherianos, Ioannis; Huvenne, Hanneke; Kanginakudru, Sriramana; Albrechtsen, Merete; An, Chunju; Aymeric, Jean-Luc; Barthel, Andrea; Bebas, Piotr; Bitra, Kavita; Bravo, Alejandra; Chevalier, François; Collinge, Derek P; Crava, Cristina M; de Maagd, Ruud A; Duvic, Bernard; Erlandson, Martin; Faye, Ingrid; Felföldi, Gabriella; Fujiwara, Haruhiko; Futahashi, Ryo; Gandhe, Archana S; Gatehouse, Heather S; Gatehouse, Laurence N; Giebultowicz, Jadwiga M; Gómez, Isabel; Grimmelikhuijzen, Cornelis J P; Groot, Astrid T; Hauser, Frank; Heckel, David G; Hegedus, Dwayne D; Hrycaj, Steven; Huang, Lihua; Hull, J Joe; Iatrou, Kostas; Iga, Masatoshi; Kanost, Michael R; Kotwica, Joanna; Li, Changyou; Li, Jianghong; Liu, Jisheng; Lundmark, Magnus; Matsumoto, Shogo; Meyering-Vos, Martina; Millichap, Peter J; Monteiro, Antónia; Mrinal, Nirotpal; Niimi, Teruyuki; Nowara, Daniela; Ohnishi, Atsushi; Oostra, Vicencio; Ozaki, Katsuhisa; Papakonstantinou, Maria; Popadic, Aleksandar; Rajam, Manchikatla V; Saenko, Suzanne; Simpson, Robert M; Soberón, Mario; Strand, Michael R; Tomita, Shuichiro; Toprak, Umut; Wang, Ping; Wee, Choon Wei; Whyard, Steven; Zhang, Wenqing; Nagaraju, Javaregowda; Ffrench-Constant, Richard H; Herrero, Salvador; Gordon, Karl; Swevers, Luc; Smagghe, Guy

    2011-02-01

    Gene silencing through RNA interference (RNAi) has revolutionized the study of gene function, particularly in non-model insects. However, in Lepidoptera (moths and butterflies) RNAi has many times proven to be difficult to achieve. Most of the negative results have been anecdotal and the positive experiments have not been collected in such a way that they are possible to analyze. In this review, we have collected detailed data from more than 150 experiments including all to date published and many unpublished experiments. Despite a large variation in the data, trends that are found are that RNAi is particularly successful in the family Saturniidae and in genes involved in immunity. On the contrary, gene expression in epidermal tissues seems to be most difficult to silence. In addition, gene silencing by feeding dsRNA requires high concentrations for success. Possible causes for the variability of success in RNAi experiments in Lepidoptera are discussed. The review also points to a need to further investigate the mechanism of RNAi in lepidopteran insects and its possible connection to the innate immune response. Our general understanding of RNAi in Lepidoptera will be further aided in the future as our public database at http://insectacentral.org/RNAi will continue to gather information on RNAi experiments.

  5. Reasons for treating secondary AML as de novo AML

    DEFF Research Database (Denmark)

    Ostgård, Lene Sofie Granfeldt; Kjeldsen, Eigil; Holm, Mette Skov;

    2010-01-01

    ) in 77 cases (49%), CMPD (chronic myeloproliferative disorder) in 43 cases (27%) and was therapy-related AML (t-AML) in 37 cases (24%). Median age at diagnosis of AML was 69 yr in secondary cases when compared to 66 yr in de novo cases (P = 0.006). In univariate analyses, secondary AML was associated...... with an inferior complete remission (CR) rate (P = 0.008) and poorer overall survival (OS, P = 0.003) whereas in complete remitters, disease-free survival (DFS) of secondary cases was equal to that of de novo cases. Interestingly, in all further analyses of CR-rates, OS and DFS, when correcting for the influence...

  6. Does Papillary Carcinoma of Thyroglossal Duct Cyst Develop De Novo?

    Directory of Open Access Journals (Sweden)

    Tekin Baglam

    2015-01-01

    Full Text Available Backround. Thyroglossal duct cyst (TDC is a developmental abnormality of the thyroid gland. Due to embryological remnants of thyroid tissue located in the TDC, the same malignant tumors that develop in the thyroid gland can also develop in the TDC. Methods. We present the unique case of a 39-year-old female with simultaneous de novo papillary carcinoma in a TDC and the thyroid gland. Results. With the suspicion of simultaneous papillary carcinoma in the TDC and the thyroid gland, Sistrunk procedure with total thyroidectomy and central neck exploration was performed. Conclusion. The clinician should have a high index of suspicion upon encountering papillary carcinoma of the TDC to differentiate de novo papillary carcinoma in the TDC from those originating from the thyroid gland, because papillary carcinoma in TDC may originate from an occult thyroid papillary carcinoma.

  7. Does Papillary Carcinoma of Thyroglossal Duct Cyst Develop De Novo?

    Science.gov (United States)

    Baglam, Tekin; Binnetoglu, Adem; Yumusakhuylu, Ali Cemal; Demir, Berat; Askan, Gokce; Sari, Murat

    2015-01-01

    Backround. Thyroglossal duct cyst (TDC) is a developmental abnormality of the thyroid gland. Due to embryological remnants of thyroid tissue located in the TDC, the same malignant tumors that develop in the thyroid gland can also develop in the TDC. Methods. We present the unique case of a 39-year-old female with simultaneous de novo papillary carcinoma in a TDC and the thyroid gland. Results. With the suspicion of simultaneous papillary carcinoma in the TDC and the thyroid gland, Sistrunk procedure with total thyroidectomy and central neck exploration was performed. Conclusion. The clinician should have a high index of suspicion upon encountering papillary carcinoma of the TDC to differentiate de novo papillary carcinoma in the TDC from those originating from the thyroid gland, because papillary carcinoma in TDC may originate from an occult thyroid papillary carcinoma.

  8. From de novo mutations to personalized therapeutic interventions in autism.

    Science.gov (United States)

    Brandler, William M; Sebat, Jonathan

    2015-01-01

    The high heritability, early age at onset, and reproductive disadvantages of autism spectrum disorders (ASDs) are consistent with an etiology composed of dominant-acting de novo (spontaneous) mutations. Mutation detection by microarray analysis and DNA sequencing has confirmed that de novo copy-number variants or point mutations in protein-coding regions of genes contribute to risk, and some of the underlying causal variants and genes have been identified. As our understanding of autism genes develops, the spectrum of autism is breaking up into quanta of many different genetic disorders. Given the diversity of etiologies and underlying biochemical pathways, personalized therapy for ASDs is logical, and clinical genetic testing is a prerequisite.

  9. De novo mutations in ataxin-2 gene and ALS risk.

    Directory of Open Access Journals (Sweden)

    José Miguel Laffita-Mesa

    Full Text Available Pathogenic CAG repeat expansion in the ataxin-2 gene (ATXN2 is the genetic cause of spinocerebellar ataxia type 2 (SCA2. Recently, it has been associated with Parkinsonism and increased genetic risk for amyotrophic lateral sclerosis (ALS. Here we report the association of de novo mutations in ATXN2 with autosomal dominant ALS. These findings support our previous conjectures based on population studies on the role of large normal ATXN2 alleles as the source for new mutations being involved in neurodegenerative pathologies associated with CAG expansions. The de novo mutations expanded from ALS/SCA2 non-risk alleles as proven by meta-analysis method. The ALS risk was associated with SCA2 alleles as well as with intermediate CAG lengths in the ATXN2. Higher risk for ALS was associated with pathogenic CAG repeat as revealed by meta-analysis.

  10. Revisiting de novo drug design: receptor based pharmacophore screening.

    Science.gov (United States)

    Amaravadhi, Harikishore; Baek, Kwanghee; Yoon, Ho Sup

    2014-01-01

    De novo drug design methods such as receptor or protein based pharmacophore modeling present a unique opportunity to generate novel ligands by employing the potential binding sites even when no explicit ligand information is known for a particular target. Recent developments in molecular modeling programs have enhanced the ability of early programs such as LUDI or Pocket that not only identify the key interactions or hot spots at the suspected binding site, but also and convert these hot spots into three-dimensional search queries and virtual screening of the property filtered synthetic libraries. Together with molecular docking studies and consensus scoring schemes they would enrich the lead identification processes. In this review, we discuss the ligand and receptor based de novo drug design approaches with selected examples.

  11. Novo desenvolvimentismo e liberalismo enraizado New developmentalism and embedded liberalism

    Directory of Open Access Journals (Sweden)

    Reinaldo Gonçalves

    2012-12-01

    Full Text Available O objetivo geral deste artigo é discutir a evolução da formulação político‑ideológica de desenvolvimento econômico conhecida como novo desenvolvimentismo. O objetivo específico é demonstrar a hipótese de que o novo desenvolvimentismo é mais uma versão do liberalismo enraizado, que exprime o compromisso entre as diretrizes estratégicas do liberalismo e a intervenção estatal orientada para a estabilização macroeconômica.The general objective of this article is to discuss the evolution of the political and ideological formulation of the economic development known as new developmentalism. The specific objective is to demonstrate the hypothesis that the new developmentalism is a version of the embedded liberalism, that expresses the compromise between the strategic guidelines of the liberalism and the state interventionism focused on macroeconomic stabilization.

  12. IVA: accurate de novo assembly of RNA virus genomes.

    Science.gov (United States)

    Hunt, Martin; Gall, Astrid; Ong, Swee Hoe; Brener, Jacqui; Ferns, Bridget; Goulder, Philip; Nastouli, Eleni; Keane, Jacqueline A; Kellam, Paul; Otto, Thomas D

    2015-07-15

    An accurate genome assembly from short read sequencing data is critical for downstream analysis, for example allowing investigation of variants within a sequenced population. However, assembling sequencing data from virus samples, especially RNA viruses, into a genome sequence is challenging due to the combination of viral population diversity and extremely uneven read depth caused by amplification bias in the inevitable reverse transcription and polymerase chain reaction amplification process of current methods. We developed a new de novo assembler called IVA (Iterative Virus Assembler) designed specifically for read pairs sequenced at highly variable depth from RNA virus samples. We tested IVA on datasets from 140 sequenced samples from human immunodeficiency virus-1 or influenza-virus-infected people and demonstrated that IVA outperforms all other virus de novo assemblers. The software runs under Linux, has the GPLv3 licence and is freely available from http://sanger-pathogens.github.io/iva © The Author 2015. Published by Oxford University Press.

  13. Glucose-dependent de Novo Lipogenesis in B Lymphocytes

    Science.gov (United States)

    Dufort, Fay J.; Gumina, Maria R.; Ta, Nathan L.; Tao, Yongzhen; Heyse, Shannon A.; Scott, David A.; Richardson, Adam D.; Seyfried, Thomas N.; Chiles, Thomas C.

    2014-01-01

    Bacterially derived lipopolysaccharide (LPS) stimulates naive B lymphocytes to differentiate into immunoglobulin (Ig)-secreting plasma cells. Differentiation of B lymphocytes is characterized by a proliferative phase followed by expansion of the intracellular membrane secretory network to support Ig production. A key question in lymphocyte biology is how naive B cells reprogram metabolism to support de novo lipogenesis necessary for proliferation and expansion of the endomembrane network in response to LPS. We report that extracellularly acquired glucose is metabolized, in part, to support de novo lipogenesis in response to LPS stimulation of splenic B lymphocytes. LPS stimulation leads to increased levels of endogenous ATP-citrate lyase (ACLY), and this is accompanied by increased ACLY enzymatic activity. ACLY produces cytosolic acetyl-CoA from mitochondrially derived citrate. Inhibition of ACLY activity in LPS-stimulated B cells with the selective inhibitor 2-hydroxy-N-arylbenzenesulfonamide (compound-9; C-9) blocks glucose incorporation into de novo lipid biosynthesis, including cholesterol, free fatty acids, and neutral and acidic phospholipids. Moreover, inhibition of ACLY activity in splenic B cells results in inhibition of proliferation and defective endomembrane expansion and reduced expression of CD138 and Blimp-1, markers for plasma-like B cell differentiation. ACLY activity is also required for LPS-induced IgM production in CH12 B lymphoma cells. These data demonstrate that ACLY mediates glucose-dependent de novo lipogenesis in response to LPS signaling and identify a role for ACLY in several phenotypic changes that define plasma cell differentiation. PMID:24469453

  14. De Novo Mutations in Moderate or Severe Intellectual Disability

    OpenAIRE

    Hamdan, Fadi F; Myriam Srour; Jose-Mario Capo-Chichi; Hussein Daoud; Christina Nassif; Lysanne Patry; Christine Massicotte; Amirthagowri Ambalavanan; Dan Spiegelman; Ousmane Diallo; Edouard Henrion; Alexandre Dionne-Laporte; Anne Fougerat; Pshezhetsky, Alexey V; Sunita Venkateswaran

    2014-01-01

    Genetics is believed to have an important role in intellectual disability (ID). Recent studies have emphasized the involvement of de novo mutations (DNMs) in ID but the extent to which they contribute to its pathogenesis and the identity of the corresponding genes remain largely unknown. Here, we report a screen for DNMs in subjects with moderate or severe ID. We sequenced the exomes of 41 probands and their parents, and confirmed 81 DNMs affecting the coding sequence or consensus splice site...

  15. Effective de novo assembly of fish genome using haploid larvae.

    Science.gov (United States)

    Iwasaki, Yuki; Nishiki, Issei; Nakamura, Yoji; Yasuike, Motoshige; Kai, Wataru; Nomura, Kazuharu; Yoshida, Kazunori; Nomura, Yousuke; Fujiwara, Atushi; Kobayashi, Takanori; Ototake, Mitsuru

    2016-02-01

    Recent improvements in next-generation sequencing technology have made it possible to do whole genome sequencing, on even non-model eukaryote species with no available reference genomes. However, de novo assembly of diploid genomes is still a big challenge because of allelic variation. The aim of this study was to determine the feasibility of utilizing the genome of haploid fish larvae for de novo assembly of whole-genome sequences. We compared the efficiency of assembly using the haploid genome of yellowtail (Seriola quinqueradiata) with that using the diploid genome obtained from the dam. De novo assembly from the haploid and the diploid sequence reads (100 million reads per each datasets) generated by the Ion Proton sequencer (200 bp) was done under two different assembly algorithms, namely overlap-layout-consensus (OLC) and de Bruijn graph (DBG). This revealed that the assembly of the haploid genome significantly reduced (approximately 22% for OLC, 9% for DBG) the total number of contigs (with longer average and N50 contig lengths) when compared to the diploid genome assembly. The haploid assembly also improved the quality of the scaffolds by reducing the number of regions with unassigned nucleotides (Ns) (total length of Ns; 45,331,916 bp for haploids and 67,724,360 bp for diploids) in OLC-based assemblies. It appears clear that the haploid genome assembly is better because the allelic variation in the diploid genome disrupts the extension of contigs during the assembly process. Our results indicate that utilizing the genome of haploid larvae leads to a significant improvement in the de novo assembly process, thus providing a novel strategy for the construction of reference genomes from non-model diploid organisms such as fish.

  16. Novos encontros de anofelíneos em recipientes artificiais

    Directory of Open Access Journals (Sweden)

    Oswaldo Paulo Forattini

    1998-12-01

    Full Text Available Assinalam-se novos encontros de anofelíneos em recipientes artificiais. Um deles diz respeito a formas imaturas de Anopheles bellator em criadouros experimentais e outro é concernente ao achado de An. albitarsis l.s., em recipiente abandonado. Tecem-se considerações sobre a pressão seletiva representada pela produção, cada vez maior, de objetos descartáveis.

  17. Molecular and genetic profiles of radiographically defined de novo meningiomas.

    Science.gov (United States)

    Kitamura, Yohei; Sasaki, Hikaru; Yoshida, Kazunari

    2012-05-01

    With the exception of radiation-induced tumors, benign meningiomas that are known to have developed within a defined time period are extremely rare. We have genetically characterized two cases of radiographically defined de novo, sporadic meningiomas--a 5-cm, left parasagittal tumor in a 61-year-old male and a 2.3-cm, right falx tumor in a 53-year-old female. Neither tumor was observed during MRIs performed for unrelated complaints 49 and 28 months before surgery, respectively. Both tumors were totally resected, and histopathological examination revealed WHO grade I meningiomas. In both cases, the MIB-1 staining indices were high for grade I meningioma (5.6% for case 1 and 9.1% for case 2), and abnormal accumulation of p53 were observed by immunohistochemistry. The two tumors shared losses of chromosome arms 1p and 7p by comparative genomic hybridization. The tumor suppressor merlin, product of the NF2 gene, was not detected in either tumor. These abnormalities found in common in both of the de novo meningiomas likely to play significant roles in the pathogenesis and/or rapid development of meningiomas. Moreover, taken together with previous studies, our findings indicate that the combined loss of 1p and 7p may play a critical role in the tumorigenesis of de novo, aggressive meningiomas.

  18. Tinindo Trincando: Contracultura e rock no samba dos Novos Baianos

    Directory of Open Access Journals (Sweden)

    VARGAS, Herom

    2011-12-01

    Full Text Available The aim of this article is to discuss aspects linked to counterculture and rock in musical production of the Brazilian band Novos Baianos in the 70’s. Having the context of Brazilian popular music from that decade as a background, two points will be discussed: 1 the particular understanding of counterculture made by the band, and 2 the experimental mix between rock and Brazilian popular musical genres. The counterculture aspects – according to Roszak (1972, Muggiatti (1981, Goffman e Joy (2007, Risério (2005, Dunn (2001; 2002 – will be observed from memories of one of the band’s leaders, the lyricist Luiz Galvão, in his book Anos 70: novos e baianos (1997, and from the scenes of the movie Novos Baianos F.C., directed by Solano Ribeiro (1973. On musical experimentation, some of their songs recorded in the 70’s point the ways of use of rock’s aesthetic elements, especially in guitar arrangements of the musician Pepeu Gomes

  19. Infant Mortality in Novo Hamburgo: Associated Factors and Cardiovascular Causes

    Science.gov (United States)

    Brum, Camila de Andrade; Stein, Airton Tetelbom; Pellanda, Lucia Campos

    2015-01-01

    Background Infant mortality has decreased in Brazil, but remains high as compared to that of other developing countries. In 2010, the Rio Grande do Sul state had the lowest infant mortality rate in Brazil. However, the municipality of Novo Hamburgo had the highest infant mortality rate in the Porto Alegre metropolitan region. Objective To describe the causes of infant mortality in the municipality of Novo Hamburgo from 2007 to 2010, identifying which causes were related to heart diseases and if they were diagnosed in the prenatal period, and to assess the access to healthcare services. Methods This study assessed infants of the municipality of Novo Hamburgo, who died, and whose data were collected from the infant death investigation records. Results Of the 157 deaths in that period, 35.3% were reducible through diagnosis and early treatment, 25% were reducible through partnership with other sectors, 19.2% were non-preventable, 11.5% were reducible by means of appropriate pregnancy monitoring, 5.1% were reducible through appropriate delivery care, and 3.8% were ill defined. The major cause of death related to heart disease (13.4%), which was significantly associated with the variables ‘age at death’, ‘gestational age’ and ‘birth weight’. Regarding access to healthcare services, 60.9% of the pregnant women had a maximum of six prenatal visits. Conclusion It is mandatory to enhance prenatal care and newborn care at hospitals and basic healthcare units to prevent infant mortality. PMID:25993588

  20. Infant Mortality in Novo Hamburgo: Associated Factors and Cardiovascular Causes

    Directory of Open Access Journals (Sweden)

    Camila de Andrade Brum

    2015-04-01

    Full Text Available Background: Infant mortality has decreased in Brazil, but remains high as compared to that of other developing countries. In 2010, the Rio Grande do Sul state had the lowest infant mortality rate in Brazil. However, the municipality of Novo Hamburgo had the highest infant mortality rate in the Porto Alegre metropolitan region. Objective: To describe the causes of infant mortality in the municipality of Novo Hamburgo from 2007 to 2010, identifying which causes were related to heart diseases and if they were diagnosed in the prenatal period, and to assess the access to healthcare services. Methods: This study assessed infants of the municipality of Novo Hamburgo, who died, and whose data were collected from the infant death investigation records. Results: Of the 157 deaths in that period, 35.3% were reducible through diagnosis and early treatment, 25% were reducible through partnership with other sectors, 19.2% were non-preventable, 11.5% were reducible by means of appropriate pregnancy monitoring, 5.1% were reducible through appropriate delivery care, and 3.8% were ill defined. The major cause of death related to heart disease (13.4%, which was significantly associated with the variables ‘age at death’, ‘gestational age’ and ‘birth weight’. Regarding access to healthcare services, 60.9% of the pregnant women had a maximum of six prenatal visits. Conclusion: It is mandatory to enhance prenatal care and newborn care at hospitals and basic healthcare units to prevent infant mortality.

  1. Infant Mortality in Novo Hamburgo: Associated Factors and Cardiovascular Causes

    Energy Technology Data Exchange (ETDEWEB)

    Brum, Camila de Andrade [Instituto de Cardiologia/Fundação Universitária de Cardiologia (IC/FUC), Porto Alegre, RS (Brazil); Stein, Airton Tetelbom [Universidade Federal de Ciências da Saúde de Porto Alegre (UFCSPA), Porto Alegre, RS (Brazil); Grupo Hospitalar Conceição (GHC), Porto Alegre, RS (Brazil); Universidade Luterana do Brasil (ULBRA), Porto Alegre, RS (Brazil); Pellanda, Lucia Campos, E-mail: luciapell.pesquisa@cardiologia.org.br [Instituto de Cardiologia/Fundação Universitária de Cardiologia (IC/FUC), Porto Alegre, RS (Brazil); Universidade Federal de Ciências da Saúde de Porto Alegre (UFCSPA), Porto Alegre, RS (Brazil)

    2015-04-15

    Infant mortality has decreased in Brazil, but remains high as compared to that of other developing countries. In 2010, the Rio Grande do Sul state had the lowest infant mortality rate in Brazil. However, the municipality of Novo Hamburgo had the highest infant mortality rate in the Porto Alegre metropolitan region. To describe the causes of infant mortality in the municipality of Novo Hamburgo from 2007 to 2010, identifying which causes were related to heart diseases and if they were diagnosed in the prenatal period, and to assess the access to healthcare services. This study assessed infants of the municipality of Novo Hamburgo, who died, and whose data were collected from the infant death investigation records. Of the 157 deaths in that period, 35.3% were reducible through diagnosis and early treatment, 25% were reducible through partnership with other sectors, 19.2% were non-preventable, 11.5% were reducible by means of appropriate pregnancy monitoring, 5.1% were reducible through appropriate delivery care, and 3.8% were ill defined. The major cause of death related to heart disease (13.4%), which was significantly associated with the variables ‘age at death’, ‘gestational age’ and ‘birth weight’. Regarding access to healthcare services, 60.9% of the pregnant women had a maximum of six prenatal visits. It is mandatory to enhance prenatal care and newborn care at hospitals and basic healthcare units to prevent infant mortality.

  2. Comparative analysis of two phenologically divergent populations of the pine processionary moth (Thaumetopoea pityocampa) by de novo transcriptome sequencing.

    Science.gov (United States)

    Gschloessl, Bernhard; Vogel, Heiko; Burban, Christian; Heckel, David; Streiff, Réjane; Kerdelhué, Carole

    2014-03-01

    The pine processionary moth Thaumetopoea pityocampa is a Mediterranean lepidopteran defoliator that experiences a rapid range expansion towards higher latitudes and altitudes due to the current climate warming. Its phenology - the time of sexual reproduction - is certainly a key trait for the local adaptation of the processionary moth to climatic conditions. Moreover, an exceptional case of allochronic differentiation was discovered ca. 15 years ago in this species. A population with a shifted phenology (the summer population, SP) co-exists near Leiria, Portugal, with a population following the classical cycle (the winter population, WP). The existence of this population is an outstanding opportunity to decipher the genetic bases of phenology. No genomic resources were so far available for T. pityocampa. We developed a high-throughput sequencing approach to build a first reference transcriptome, and to proceed with comparative analyses of the sympatric SP and WP. We pooled RNA extracted from whole individuals of various developmental stages, and performed a transcriptome characterisation for both populations combining Roche 454-FLX and traditional Sanger data. The obtained sequences were clustered into ca. 12,000 transcripts corresponding to 9265 unigenes. The mean transcript coverage was 21.9 reads per bp. Almost 70% of the de novo assembled transcripts displayed significant similarity to previously published proteins and around 50% of the transcripts contained a full-length coding region. Comparative analyses of the population transcriptomes allowed to investigate genes specifically expressed in one of the studied populations only, and to identify the most divergent homologous SP/WP transcripts. The most divergent pairs of transcripts did not correspond to obvious phenology-related candidate genes, and 43% could not be functionally annotated. This study provides the first comprehensive genome-wide resource for the target species T. pityocampa. Many of the

  3. Novel variation and de novo mutation rates in population-wide de novo assembled Danish trios

    DEFF Research Database (Denmark)

    Besenbacher, Søren; Liu, Siyang; Gonzalez-Izarzugaza, Jose Maria;

    2015-01-01

    than previous effortsshowing the merits of high coverage and de novo assembly approaches. In addition, we usetrio information to identify de novo mutations and use a probabilistic method to providedirect estimates of 1.27e8 and 1.5e9 per nucleotide per generation for SNVs and indels, respectively....

  4. MORPHOLOGICAL ASPECTS OF Azochis gripusalis WALKER, 1859 (PYRAUSTIDAE - LEPIDOPTERA ASPECTOS MORFOLÓGICOS DA Azochis gripusalis Walker, 1859 (PYRAUSTIDAE - LEPIDOPTERA

    Directory of Open Access Journals (Sweden)

    Antônio Henrique Garcia

    2007-09-01

    Full Text Available

    For the purpose of understanding the external morphology of the adult of the Azochis gripusalis Walker, 1859 (Pyraustidae - Lepidoptera, a study was made of the head in dorsal, ventral, front, back and lateral views, of the thorax in dorsal, ventral and lateral views, of the front and back wings, of the prothoracic, mesothoracic and metathoracic legs, and of the abdomen in lateral view. The Azochis gripusalis is known by its large, dark ocelli; the sucking pump is well developed. The maxillary palps (feelers are small; the labial ones along with the middle segment are larger than the other segments. The thorax is straw-yellow with groups of shiny, light gray scales. The prothorax is very restricted in size. The mesothorax is larger than the prothorax and the metathorax put together. The front wings are triangular, shiny straw-yellow, with groups of dark brown scales arranged obliquely, forming isolated dark spots, measuring from 13 to 16 mm in length and having 13 veins all of which, with the exception of 3A, touch the edge of the wing.  The veins R¹, R² and R5 emerge directly from the discoidal cavity. R³ and R4 at the vertex of the wing are slightly bent downward. R², R³ and R4 form a trident (crotch. The back wings are semi-elliptcal, shiny straw-yellow, with groups of dark, irregular scales, and have 10 veins, all of which touch the edge of the wing. R², R³, R4 and R5 are fused. The discoidal cavity is open. Cu¹ emerges from the back angle of the discoidal cavity. 1A and 2A are fused at the base. The anal veins touch the edge of the wing. The wings, when resting, remain partially open. The legs display tibial spurs arranged according to the formula 0-2-4, respectively. The abdomen, dorsally, is shiny straw-yel1ow, with groups of slightly darkened scales between the segments. Eight segments are clearly distinguished. The sixth segment is slightly bent upward; nine and

  5. The structure of cystoliths in selected taxa of the genus Ficus L. (Moraceae) in Peninsular Malaysia

    Science.gov (United States)

    Ummu-Hani, B.; Noraini, T.

    2013-11-01

    A study was undertaken on mature leaves of 15 taxa of the genus Ficus in Peninsular Malaysia. The main objectives of this study are to determine the morphology and distribution of cystoliths in the epidermal layers of the leaf lamina in selected taxa of Ficus. The morphology of cystoliths is classified based on its size, shape, colour, and the presence of stalk cystolith. There are seven types of cystolith morphology observed in this study. Most of the cystoliths are either solitary, elongated, narrow or broad, and pointed or blunt at one or both ends. However, double- and rarely triple-cystoliths are also present in some species. The size of the cystoliths varies even within the same species. Based on the position of cystoliths, all the 15 taxa studied can be generally classified into three groups: Group 1 - with cystoliths adjacent to the adaxial epidermis layer (F. annulata, F. benghalensis and F. superba), Group 2 - with cystoliths adjacent to the abaxial epidermis layer (F. aurantiacea, F. lepicarpa, F. hispida, F. obscura var. borneensis, F. religiosa, F. schwarzii, F. ucinata and F. vasculosa), and Group 3 - with cystoliths present in both adaxial and abaxial epidermis layers (F. benjamina, F. depressa, F. microcarpa and F. tinctoria). Based on the occurrence of cystoliths, the types of lithocysts were related to the number of epidermal layers, i.e. hair-like lithocysts in uniseriate epidermis is present in all species studied. However, the characteristics of the cystoliths may not suitably be used as a taxonomic marker but it can be useful as additional character for group identification in Ficusper.

  6. Diversity of Dominant Bacterial Taxa in Activated Sludge Promotes Functional Resistance following Toxic Shock Loading

    KAUST Repository

    Saikaly, Pascal

    2010-12-14

    Examining the relationship between biodiversity and functional stability (resistance and resilience) of activated sludge bacterial communities following disturbance is an important first step towards developing strategies for the design of robust biological wastewater treatment systems. This study investigates the relationship between functional resistance and biodiversity of dominant bacterial taxa by subjecting activated sludge samples, with different levels of biodiversity, to toxic shock loading with cupric sulfate (Cu[II]), 3,5-dichlorophenol (3,5-DCP), or 4-nitrophenol (4-NP). Respirometric batch experiments were performed to determine the functional resistance of activated sludge bacterial community to the three toxicants. Functional resistance was estimated as the 30 min IC50 or the concentration of toxicant that results in a 50% reduction in oxygen utilization rate compared to a referential state represented by a control receiving no toxicant. Biodiversity of dominant bacterial taxa was assessed using polymerase chain reaction-terminal restriction fragment length polymorphism (PCR-T-RFLP) targeting the 16S ribosomal RNA (16S rRNA) gene. Statistical analysis of 30 min IC50 values and PCR-T-RFLP data showed a significant positive correlation (P<0.05) between functional resistance and microbial diversity for each of the three toxicants tested. To our knowledge, this is the first study showing a positive correlation between biodiversity of dominant bacterial taxa in activated sludge and functional resistance. In this system, activated sludge bacterial communities with higher biodiversity are functionally more resistant to disturbance caused by toxic shock loading. © 2010 Springer Science+Business Media, LLC.

  7. Larger ejaculate volumes are associated with a lower degree of polyandry across bushcricket taxa.

    Science.gov (United States)

    Vahed, Karim

    2006-09-22

    In numerous insects, including bushcrickets (Tettigoniidae), males are known to transfer substances in the ejaculate that inhibit the receptivity of females to further matings, but it has not yet been established whether these substances reduce the lifetime degree of polyandry of the female. The aim of this study was to test the hypothesis that larger ejaculate volumes should be associated with a lower degree of polyandry across tettigoniid taxa, controlling for male body mass and phylogeny. Data on ejaculate mass, sperm number, nuptial gift mass and male mass were taken primarily from the literature. The degree of polyandry for 14 species of European bushcrickets was estimated by counting the number of spermatodoses within the spermathecae of field-caught females towards the end of their adult lifespans. Data for four further species were obtained from the literature. Data were analysed by using both species regression and independent contrasts to control for phylogeny. Multiple regression analysis revealed that, as predicted, there was a significant negative association between the degree of polyandry and ejaculate mass, relative to male body mass, across bushcricket taxa. Nuptial gift size and sperm number, however, did not contribute further to interspecific variation in the degree of polyandry. A positive relationship was found, across bushcricket taxa, between relative nuptial gift size and relative ejaculate mass, indicating that larger nuptial gifts allow the male to overcome female resistance to accepting large ejaculates. This appears to be the first comparative evidence that males can manipulate the lifetime degree of polyandry of their mates through the transfer of large ejaculates.

  8. Brachyceran Diptera (Insecta) in Cretaceous ambers, Part IV, Significant New Orthorrhaphous Taxa.

    Science.gov (United States)

    Grimaldi, David A; Arillo, Antonio; Cumming, Jeffrey M; Hauser, Martin

    2011-01-01

    Thirteen species of basal Brachycera (11 described as new) are reported, belonging to nine families and three infraorders. They are preserved in amber from the Early Cretaceous (Neocomian) of Lebanon, Albian of northern Spain, upper Albian to lower Cenomanian of northern Myanmar, and Late Cretaceous of New Jersey USA (Turonian) and Alberta, Canada (Campanian). Taxa are as follows, with significance as noted: In Stratiomyomorpha: Stratiomyidae (Cretaceogaster pygmaeus Teskey [2 new specimens in Canadian amber], Lysistrata emerita Grimaldi & Arillo, gen. et sp. n. [stem-group species of the family in Spanish amber]), and Xylomyidae (Cretoxyla azari Grimaldi & Cumming, gen. et sp. n. [in Lebanese amber], and an undescribed species from Spain). In Tabanomorpha: Tabanidae (Cratotabanus newjerseyensis Grimaldi, sp. n., in New Jersey amber). In Muscomorpha: Acroceridae (Schlingeromyia minuta Grimaldi & Hauser, gen. et sp. n. and Burmacyrtus rusmithi Grimaldi & Hauser gen. etsp. n., in Burmese amber, the only definitive species of the family from the Cretaceous); Mythicomyiidae (Microburmyia analvena Grimaldi & Cumming gen. et sp. n. and Microburmyia veanalvena Grimaldi & Cumming, sp. n., stem-group species of the family, both in Burmese amber); Apsilocephalidae or near (therevoid family-group) (Kumaromyia burmitica Grimaldi & Hauser, gen. et sp. n. [in Burmese amber]); Apystomyiidae (Hilarimorphites burmanica Grimaldi & Cumming, sp. n. [in Burmese amber], whose closest relatives are from the Late Jurassic of Kazachstan, the Late Cretaceous of New Jersey, and Recent of California). Lastly, two species belonging to families incertae sedis, both in Burmese amber: Tethepomyiidae (Tethepomyia zigrasi Grimaldi & Arillo sp. n., the aculeate oviscapt of which indicates this family was probably parasitoidal and related to Eremochaetidae); and unplaced to family is Myanmyia asteiformia Grimaldi, gen. et sp. n., a minute fly with highly reduced venation. These new taxa significantly

  9. Ecological patterns, diversity and core taxa of microbial communities in groundwater-fed rapid gravity filters

    DEFF Research Database (Denmark)

    Gülay, Arda; Musovic, Sanin; Albrechtsen, Hans-Jørgen;

    2016-01-01

    with ability to oxidize ammonium, nitrite, iron, manganese and methane as primary growth substrate were identified and dominated in both PFs (73.6±6%) and AFs (61.4±21%), suggesting their functional importance. Surprisingly, operational taxonomic unit richness correlated strongly and positively with sampling...... the second most and most abundant fraction in PFs (27±23%) and AFs (45.2±23%), respectively, and were far more abundant than typical proteobacterial ammonium-oxidizing bacteria, suggesting a physiology beyond nitrite oxidation for Nitrospira. Within the core taxa, sequences closely related to types...

  10. Taxa de Utilização de Antibióticos numa UCIN

    OpenAIRE

    Rodrigues, V; Santos, S; Maia, R; Neto, MT; Serelha, M.

    2011-01-01

    Introdução: Os antibióticos são dos fármacos mais prescritos em Unidades de Cuidados Intensivos Neonatais (UCIN). Apesar disso, os estudos sobre este assunto são escassos. Objectivos: Avaliar a taxa de utilização de antibióticos numa UCIN médico-cirúrgica. Métodos: Estudo prospectivo, observacional. Foi realizado o registo diário dos antibióticos efectivamente administrados a todos os recém-nascidos internados, durante dois períodos de 2 meses do ano de 2010. Os dados foram reg...

  11. Typification of names of South American taxa related to Woodsia montevidensis (Woodsiaceae)

    Science.gov (United States)

    Arana, Marcelo D.; Mynssen, Claudine M.; Zimmer, Brigitte; Ponce, M. Monica

    2016-01-01

    Abstract A revision of the nomenclature of six South American taxa related to Woodsia is presented, as a part of a taxonomic revision of the genus in South America. Lectotypes are selected for Cheilanthes crenata, Woodsia crenata var. pallidipes, Woodsia incisa, Woodsia montevidensis var. fuscipes and the second step lectotypification for Dicksonia montevidensis and Woodsia peruviana, based on the analysis of their protologues and original herbarium material. All names are currently synonyms of Woodsia montevidensis. Physematium incisum (Gillies ex Hook. & Grev.) Kunze constitutes an illegitimate name and Physematium cumingianum is considered as nomen inquirendum. PMID:27489474

  12. Phylogenetic relationships among higher Nemertean (Nemertea) Taxa inferred from 18S rDNA sequences.

    Science.gov (United States)

    Sundberg, P; Turbeville, J M; Lindh, S

    2001-09-01

    We estimated the phylogenetic relationships of 15 nemertean (phylum Nemertea) species from the four subclasses Hoplo-, Hetero-, Palaeo-, and Bdellonemertea with 18S rDNA sequence data. Three outgroup taxa were used for rooting: Annelida, Platyhelminthes, and Mollusca. Parsimony and maximum-likelihood analyses supported the monophyletic status of the Heteronemertea and a taxon consisting of hoplonemerteans and Bdellonemertea, while indicating that Palaeonemertea is paraphyletic. The monophyletic status of the two nemertean classes Anopla and Enopla is not supported by the data. The unambiguous clades are well supported, as assessed by a randomization test (bootstrapping) and branch support values. Copyright 2001 Academic Press.

  13. Claves para el reconocimiento taxonómico dentario en taxa del Superorden Squalomorphi de Chile (Chondrichthyes: Elasmobranchii Taxonomic dental keys for the Chilean taxa of the Superorder Squalomorphi (Chondricthyes: Elasmobranchii

    Directory of Open Access Journals (Sweden)

    Sylvia Sáez

    2010-01-01

    Full Text Available Se presenta una serie de claves para el reconocimiento dentario de diferentes taxa del Superorden Squalomorphi de Chile. Se seleccionaron características dentarias externas que permitan obtener una observación más expedita que conduzcan a un estudio más acabado, de la diagnosis de los diferentes taxa constituyentes de este grupo de peces, haciéndolas extensibles para estudios de piezas dentales fósiles.A series of taxonomic dental keys is presented for the Chilean taxa of the Superorder Squalomorphi. External dental characteristics were selected for easier observation, leading to more thorough studies. This allows diagnoses of the different taxa comprising this group of fishes and, moreover, can be extended to studies of fossil teeth.

  14. A new genus and species of leaf miner (Lepidoptera, Gracillariidae for Chile associated to the native tree Lithraea caustica

    Directory of Open Access Journals (Sweden)

    Enrique A. Mundaca

    2013-06-01

    Full Text Available A new genus and species of leaf miner (Lepidoptera, Gracillariidae for Chile associated to the native tree Lithraea caustica. We propose the new genus and species of Gracillariidae (Lepidoptera Hualpenia lithraeophaga Mundaca, Parra &Vargas gen. nov., sp. nov., leaf miner of Lithraea caustica (Mol. H. et Arn (Anacardiaceae occurring in southern central Chile. Aspects of the life cycle, adult and larval morphology, development and feeding habits of the new genus and species are also presented. We emphasise the uniqueness and importance of this new species for broadening the current knowledge on the Chilean fauna of Gracillariidae.

  15. Web Access to Digitised Content of the Exhibition Novo Mesto 1848-1918 at the Dolenjska Museum, Novo Mesto

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    Majda Pungerčar

    2013-09-01

    Full Text Available EXTENDED ABSTRACTFor the first time, the Dolenjska museum Novo mesto provided access to digitised museum resources when they took the decision to enrich the exhibition Novo mesto 1848-1918 by adding digital content. The following goals were identified: the digital content was created at the time of exhibition planning and design, it met the needs of different age groups of visitors, and during the exhibition the content was accessible via touch screen. As such, it also served for educational purposes (content-oriented lectures or problem solving team work. In the course of exhibition digital content was accessible on the museum website http://www.novomesto1848-1918.si. The digital content was divided into the following sections: the web photo gallery, the quiz and the game. The photo gallery was designed in the same way as the exhibition and the print catalogue and extended by the photos of contemporary Novo mesto and accompanied by the music from the orchestron machine. The following themes were outlined: the Austrian Empire, the Krka and Novo mesto, the town and its symbols, images of the town and people, administration and economy, social life and Novo mesto today followed by digitised archive materials and sources from that period such as the Commemorative book of the Uniformed Town Guard, the National Reading Room Guest Book, the Kazina guest book, the album of postcards and the Diploma of Honoured Citizen Josip Gerdešič. The Web application was also a tool for a simple and on line selection of digitised material and the creation of new digital content which proved to be much more convenient for lecturing than Power Point presentations. The quiz consisted of 40 questions relating to the exhibition theme and the catalogue. Each question offered a set of three answers only one of them being correct and illustrated by photography. The application auto selected ten questions and valued the answers immediately. The quiz could be accessed

  16. Inter-Taxa Differences in Iodine Uptake by Plants: Implications for Food Quality and Contamination

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    Eleni Siasou

    2015-11-01

    Full Text Available Although iodine is not essential for plants, they take it up readily and, in foodchains, are significant sources of iodine for organisms with an essential requirement for it. During several nuclear accidents radioiodine has been an important component of releases of radioactivity and has caused serious contamination of foodchains. Differences in iodine uptake by different plant taxa are, therefore, important to nutritional and radioecological studies. Using techniques we have developed for a range of other elements, we analyzed inter-taxa differences in radioiodine uptake by 103 plant species and between varieties of two species, and analyzed them using a recent, phylogenetically-informed, taxonomy. The results show that there are significant differences in uptake above and below the species level. There are significant differences between Monocots and Eudicots in iodine uptake, and, in particular, hierarchical ANOVA revealed significant differences between Genera within Families. These analyses of the taxonomic origin of differences in plant uptake of iodine can help the prediction of crop contamination with radioiodine and the management of stable iodine in crops for nutritional purposes.

  17. Pollen seasons of selected tree and shrub taxa in Kraków and its neighbourhood

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    Dorota Myszkowska

    2012-12-01

    Full Text Available The aim of the study was to compare the dynamics of pollen seasons of selected tree and shrub taxa among measurement sites in Kraków and its neighbourhood. The study was performed in Kraków and Piotrkowice Małe in 2002, as well as in Kraków and Giebułtów in 2006. During the study the volumetric method was applied and pollen grains were counted along four horizontal lines. The lowest percentage of Corylus pollen and the highest percentage of Betula pollen were found in the analysed sites. The differences among start dates in various measurement sites in a given year were inconsiderable. Statistically signifi cant differences of SPI values for the majority of taxa were found between measurement sites and between seasons for Kraków. The pollen season dynamics showed one (Betula, Pinaceae or more maximum values (Corylus, Populus, Fraxinus, Salix. The occurrence of many peaks could be explained by the appearance of several species within one genus in the studied area or by various weather conditions. In 2002 maximum pollen concentrations were recorded earlier than in 2006. The differences in these dates could be explained better by cumulative temperature >5℃ than >0℃.

  18. Hidden Mediterranean diversity: assessing species taxa by molecular phylogeny within the opilionid family Trogulidae (Arachnida, Opiliones).

    Science.gov (United States)

    Schönhofer, Axel L; Martens, Jochen

    2010-01-01

    This is the first comprehensive study to evaluate the relationships between the western palearctic harvestman families Dicranolasmatidae, Trogulidae and Nemastomatidae with focus on the phylogeny and systematics of Trogulidae, using combined sequence data of the nuclear 28S rRNA and the mitochondrial cytochrome b gene. Bayesian analysis and Maximum parsimony do not reliably resolve Dicranolasma as distinct family but place it on a similar phylogenetic level as several lineages of Trogulidae. Nemastomatidae and Trogulidae turned out to be monophyletic, as did genera Anelasmocephalus and Trogulus within the Trogulidae. The genera Calathocratus, Platybessobius and Trogulocratus each appeared para or polyphyletic, respectively and are synonymized with Calathocratus. The monotypic genus Kofiniotis is well supported. We show molecular data to be in general concordance with taxa characterized by morphology. Molecular data are especially useful to calibrate morphological characters for systematic purposes within homogeneous taxa. In the majority of closely related valid species we show the lowest level of genetic distance to be not lower than 5%. By this threshold in terms of traditionally accepted species the estimated number of species turns out to be 1.5-2.4 times higher than previously believed. With respect to European fauna cryptic diversity in Trogulidae is obviously extraordinarily high and hitherto largely underestimated.

  19. Climate-driven C4 plant distributions in China: divergence in C4 taxa

    Science.gov (United States)

    Wang, Renzhong; Ma, Linna

    2016-06-01

    There have been debates on the driving factors of C4 plant expansion, such as PCO2 decline in the late Micocene and warmer climate and precipitation at large-scale modern ecosystems. These disputes are mainly due to the lack of direct evidence and extensive data analysis. Here we use mass flora data to explore the driving factors of C4 distribution and divergent patterns for different C4 taxa at continental scale in China. The results display that it is mean annual climate variables driving C4 distribution at present-day vegetation. Mean annual temperature is the critical restriction of total C4 plants and the precipitation gradients seem to have much less impact. Grass and sedge C4 plants are largely restricted to mean annual temperature and precipitation respectively, while Chenopod C4 plants are strongly restricted by aridity in China. Separate regression analysis can succeed to detect divergences of climate distribution patterns of C4 taxa at global scale.

  20. Quantitative analysis of total flavonoids and total phenolic acids in thirty Hypericum taxa.

    Science.gov (United States)

    Pilepić, Kroata Hazler; Males, Zeljan; Crkvencić, Maja

    2013-03-01

    The content of total flavonoids and total phenolic acids in the aerial parts of thirty Hypericum taxa collected over two consecutive seasons was investigated by spectrophotometric methods. All taxa examined contained flavonoids and phenolic acids in different quantities, although the differences between species and year's harvest were not found to be significant. The quantity of total flavonoids ranged from 0.1 to 1.6%. The highest content of flavonoids was found in the samples of H. japonicum (1.6%) and H. perforatum (1.5%), while the samples of H. androsaemum and H. balearicum comprised the lowest flavonoid amount (0.13%). The content of total phenolic acids in the investigated samples was found to be between 1.1-10.4%. The samples of H. perforatum were found to contain the highest quantity of phenolic acids (10.4% and 10.2%), whereas the sample ofH. linarifolium showed the lowest amount of phenolic acids (1.1%).

  1. TAXAS DE INFECÇÃO HOSPITALAR EM UMA UNIDADE DE TERAPIA INTENSIVA NEONATAL

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    Waleska de Oliveira Bittencourt

    2009-09-01

    Full Text Available Trata-se de uma pesquisa descritiva quantitativa que teve o seguinte objetivo: identificar as taxas de infecção hospitalar relacionadas ao trato vascular em recém-nascidos hospitalizados na Unidade de Terapia Intensiva Neonatal de um Hospital Universitário localizado no estado do Rio de Janeiro no período de 2005 a 2007. A amostra foi constituída todos os recém-nascidos internados em 2005 e 2007. Os resultados indicaram que, embora a taxa de infecções hospitalares em 2007 seja menor que no ano de 2005, a proporção de infecções relacionadas ao trato vascular sofreu um discreto aumento considerando as demais topografias. Embora a educação continuada seja empregada na unidade, acredita-se que fatores como a alta rotatividade de profissionais e o uso de mais cateteres venosos centrais na rotina reduzam sua efetividade. Desta forma, foram elaboradas algumas propostas para a redução das infecções hospitalares na unidade estudada.

  2. Integrated Analyses Resolve Conflicts over Squamate Reptile Phylogeny and Reveal Unexpected Placements for Fossil Taxa

    Science.gov (United States)

    Reeder, Tod W.; Townsend, Ted M.; Mulcahy, Daniel G.; Noonan, Brice P.; Wood, Perry L.; Sites, Jack W.; Wiens, John J.

    2015-01-01

    Squamate reptiles (lizards and snakes) are a pivotal group whose relationships have become increasingly controversial. Squamates include >9000 species, making them the second largest group of terrestrial vertebrates. They are important medicinally and as model systems for ecological and evolutionary research. However, studies of squamate biology are hindered by uncertainty over their relationships, and some consider squamate phylogeny unresolved, given recent conflicts between molecular and morphological results. To resolve these conflicts, we expand existing morphological and molecular datasets for squamates (691 morphological characters and 46 genes, for 161 living and 49 fossil taxa, including a new set of 81 morphological characters and adding two genes from published studies) and perform integrated analyses. Our results resolve higher-level relationships as indicated by molecular analyses, and reveal hidden morphological support for the molecular hypothesis (but not vice-versa). Furthermore, we find that integrating molecular, morphological, and paleontological data leads to surprising placements for two major fossil clades (Mosasauria and Polyglyphanodontia). These results further demonstrate the importance of combining fossil and molecular information, and the potential problems of estimating the placement of fossil taxa from morphological data alone. Thus, our results caution against estimating fossil relationships without considering relevant molecular data, and against placing fossils into molecular trees (e.g. for dating analyses) without considering the possible impact of molecular data on their placement. PMID:25803280

  3. Antimicrobial and antioxidative activity of various leaf extracts of Amphoricarpos vis. (Asteraceae taxa

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    Gavrilović Milan

    2016-01-01

    Full Text Available The antimicrobial and antioxidative activities of diethyl ether, 80% methanol and 50% acetone extracts of the leaves of three Amphoricarpos taxa (Asteraceae; A. neumayerianus, A. autariatus ssp. autariatus and A. autariatus ssp. bertisceus from the Balkan Peninsula were investigated. The antimicrobial activity was determined by the broth microdilution assay against eight bacterial and eight fungal species. The in vitro antioxidative activity was assessed by the DPPH assay. The total phenolic and flavonoid contents were also determined. The most sensitive bacterial species were Bacillus cereus and Staphylococcus aureus. The best antibacterial potential was obtained for the methanol extract of A. neumayerianus, while the diethyl ether extract of this species showed the lowest effect. In general, the tested extracts showed higher activity than the commercial antibiotics streptomycin and ampicillin. Also, all micromycetes were sensitive to the tested extracts. The most sensitive was Trichoderma viride. The highest and lowest antifungal effect was determined in A. a. ssp. autariatus for the diethyl ether and acetone extracts, respectively. The highest total phenolic and flavonoid contents were determined in the methanol extract of A. a. autariatus. The best antioxidative activity was demonstrated by the methanol extract of A. a. ssp. autariatus as comparing to matching extracts from the other two taxa.

  4. Unraveling Trichoderma species in the attine ant environment: description of three new taxa.

    Science.gov (United States)

    Montoya, Quimi Vidaurre; Meirelles, Lucas Andrade; Chaverri, Priscila; Rodrigues, Andre

    2016-05-01

    Fungus-growing "attine" ants forage diverse substrates to grow fungi for food. In addition to the mutualistic fungal partner, the colonies of these insects harbor a rich microbiome composed of bacteria, filamentous fungi and yeasts. Previous work reported some Trichoderma species in the fungus gardens of leafcutter ants. However, no studies systematically addressed the putative association of Trichoderma with attine ants, especially in non-leafcutter ants. Here, a total of 62 strains of Trichoderma were analyzed using three molecular markers (ITS, tef1 and rpb2). In addition, 30 out of 62 strains were also morphologically examined. The strains studied correspond to the largest sampling carried out so far for Trichoderma in the attine ant environment. Our results revealed the richness of Trichoderma in this environment, since we found 20 Trichoderma species, including three new taxa described in the present work (Trichoderma attinorum, Trichoderma texanum and Trichoderma longifialidicum spp. nov.) as well as a new phylogenetic taxon (LESF 545). Moreover, we show that all 62 strains grouped within different clades across the Trichoderma phylogeny, which are identical or closely related to strains derived from several other environments. This evidence supports the transient nature of the genus Trichoderma in the attine ant colonies. The discovery of three new species suggests that the dynamic foraging behavior of these insects might be responsible for accumulation of transient fungi into their colonies, which might hold additional fungal taxa still unknown to science.

  5. Temporal scaling of bacterial taxa is influenced by both stochastic and deterministic ecological factors.

    Science.gov (United States)

    van der Gast, Christopher J; Ager, Duane; Lilley, Andrew K

    2008-06-01

    Microorganisms operate at a range of spatial and temporal scales acting as key drivers of ecosystem properties. Therefore, many key questions in microbial ecology require the consideration of both spatial and temporal scales. Spatial scaling, in particular the species-area relationship (SAR), has a long history in ecology and has recently been addressed in microbial ecology. However, the temporal analogue of the SAR, the species-time relationship, has received far less attention even in the science of general ecology. Here we focus upon the role of temporal scaling in microbial ecological patterns by coupling molecular characterization of bacterial communities in discrete island (bioreactor) systems with a macroecological approach. Our findings showed that the temporal scaling exponent (slope), and therefore taxa turnover of the bacterial taxa-time relationship decreased as selective pressure (industrial wastewater concentration) increased. Also, as the concentration of industrial wastewater increased across the bioreactors, we observed a gradual switch from stochastic community assembly to more deterministic (niche)-based considerations. The identification of broad-scale statistical patterns is particularly relevant to microbial ecology, as it is frequently difficult to identify individual species or their functions. In this study, we identify wide-reaching statistical patterns of diversity and show that they are shaped by the prevalent underlying ecological factors.

  6. Development, characterisation, and across-taxa utility of oil palm (Elaeis guineensis Jacq.) microsatellite markers.

    Science.gov (United States)

    Billotte, N; Risterucci, A M; Barcelos, E; Noyer, J L; Amblard, P; Baurens, F C

    2001-06-01

    The results of the development of oil palm (Elaeis guineensis Jacq.) microsatellite markers are given step by step, from the screening of libraries enriched in (GA)n, (GT)n, and (CCG)n simple-sequence repeats (SSRs) to the final characterisation of 21 SSR loci. Also published are primer sequences, estimates of allele size range, and expected heterozygosity in E. guineensis and in the closely related species E. oleifera, in which an optimal utility of the SSR markers was observed. Multivariate data analyses showed the ability of SSR markers to efficiently reveal the genetic-diversity structure of the genus Elaeis in accordance with known geographical origins and with measured genetic relationships based on previous molecular studies. High levels of allelic variability indicated that E. guineensis SSRs will be a powerful tool for genetic studies of the genus Elaeis, including variety identification and intra- or inter-specific genetic mapping. PCR amplification tests on a subset of 16 other palm species and allele-sequence data showed that E. guineensis SSRs are putative transferable markers across palm taxa. In addition, phenetic information based on SSR flanking region sequences makes E. guineensis SSR markers a potentially useful molecular resource for any researcher studying the phylogeny of palm taxa.

  7. Iteration expansion and regional evolution: phylogeography of Dendrobium officinale and four related taxa in southern China.

    Science.gov (United States)

    Hou, Beiwei; Luo, Jing; Zhang, Yusi; Niu, Zhitao; Xue, Qingyun; Ding, Xiaoyu

    2017-03-06

    The genus Dendrobium was used as a case study to elucidate the evolutionary history of Orchidaceae in the Sino-Japanese Floristic Region (SJFR) and Southeast Asia region. These evolutionary histories remain largely unknown, including the temporal and spatial distribution of the evolutionary events. The present study used nuclear and plastid DNA to determine the phylogeography of Dendrobium officinale and four closely related taxa. Plastid DNA haplotype and nuclear data were shown to be discordant, suggesting reticulate evolution drove the species' diversification. Rapid radiation and genetic drift appeared to drive the evolution of D. tosaense and D. flexicaule, whereas introgression or hybridization might have been involved in the evolution of D. scoriarum and D. shixingense. The phylogeographical structure of D. officinale revealed that core natural distribution regions might have served as its glacial refuges. In recent years, human disturbances caused its artificial migration and population extinction. The five taxa may have originated from the Nanling Mountains and the Yungui Plateau and then migrated northward or eastward. After the initial iteration expansion, D. officinale populations appeared to experience the regional evolutionary patterns in different regions and follow the sequential or rapid decline in gene exchange.

  8. Integrated analyses resolve conflicts over squamate reptile phylogeny and reveal unexpected placements for fossil taxa.

    Science.gov (United States)

    Reeder, Tod W; Townsend, Ted M; Mulcahy, Daniel G; Noonan, Brice P; Wood, Perry L; Sites, Jack W; Wiens, John J

    2015-01-01

    Squamate reptiles (lizards and snakes) are a pivotal group whose relationships have become increasingly controversial. Squamates include >9000 species, making them the second largest group of terrestrial vertebrates. They are important medicinally and as model systems for ecological and evolutionary research. However, studies of squamate biology are hindered by uncertainty over their relationships, and some consider squamate phylogeny unresolved, given recent conflicts between molecular and morphological results. To resolve these conflicts, we expand existing morphological and molecular datasets for squamates (691 morphological characters and 46 genes, for 161 living and 49 fossil taxa, including a new set of 81 morphological characters and adding two genes from published studies) and perform integrated analyses. Our results resolve higher-level relationships as indicated by molecular analyses, and reveal hidden morphological support for the molecular hypothesis (but not vice-versa). Furthermore, we find that integrating molecular, morphological, and paleontological data leads to surprising placements for two major fossil clades (Mosasauria and Polyglyphanodontia). These results further demonstrate the importance of combining fossil and molecular information, and the potential problems of estimating the placement of fossil taxa from morphological data alone. Thus, our results caution against estimating fossil relationships without considering relevant molecular data, and against placing fossils into molecular trees (e.g. for dating analyses) without considering the possible impact of molecular data on their placement.

  9. The Leiobunum rupestre species group: resolving the taxonomy of four widespread European taxa (Opiliones: Sclerosomatidae

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    Jochen Martens

    2016-07-01

    Full Text Available Within the central European opilionid fauna the widely used species names Leiobunum rupestre Herbst, 1799 and Leiobunum tisciae Avram, 1968 pose taxonomic and distributional problems. In addition, Nelima apenninica Martens, 1969 is close to L. tisciae in terms of external and genital morphology, but is specifically distinct. While coxal denticulation is largely lacking in N. apenninica, the validity of the genus Nelima Roewer, 1910 is questioned again. In addition, Leiobunum subalpinum Komposch, 1998, a recently described novelty from the eastern Alps, is closely related to L. rupestre. The four species are combined as the morphologically defined Leiobunum rupestre species group. Except for L. subalpinum, they were found to be allopatrically distributed from the Carpathians across central and Northwest Europe to the south-western Alps. The latter species is locally sympatric and partly elevationally parapatric to L. rupestre. Leiobunum tisciae is a recently introduced name and here recognized as a junior synonym of a number of taxa described much earlier, of which L. gracile Thorell, 1876 is re-introduced as oldest available name. Detailed morphological and distributional data for all taxa are presented.

  10. Fission and fusion in island taxa--serendipity, or something to be expected?

    Science.gov (United States)

    Emerson, Brent C; Faria, Christiana M A

    2014-11-01

    A well-used metaphor for oceanic islands is that they act as 'natural laboratories' for the study of evolution. But how can islands or archipelagos be considered analogues of laboratories for understanding the evolutionary process itself? It is not necessarily the case that just because two or more related species occur on an island or archipelago, somehow, this can help us understand more about their evolutionary history. But in some cases, it can. In this issue of Molecular Ecology, Garrick et al. () use population-level sampling within closely related taxa of Galapagos giant tortoises to reveal a complex demographic history of the species Chelonoidis becki - a species endemic to Isabela Island, and geographically restricted to Wolf Volcano. Using microsatellite genotyping and mitochondrial DNA sequencing, they provide a strong case for C. becki being derived from C. darwini from the neighbouring island of Santiago. But the interest here is that colonization did not happen only once. Garrick et al. () reveal C. becki to be the product of a double colonization event, and their data reveal these two founding lineages to be now fusing back into one. Their results are compelling and add to a limited literature describing the evolutionary consequences of double colonization events. Here, we look at the broader implications of the findings of Garrick et al. () and suggest genomic admixture among multiple founding populations may be a characteristic feature within insular taxa.

  11. Taxa de corte sustentável para manejo das florestas tropicais

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    Evaldo Muñoz Braz

    2012-03-01

    Full Text Available http://dx.doi.org/10.5902/198050985086Existe uma grande lacuna dos planos de manejo de florestas tropicais com relação à intensidade de extração e às taxas de corte, usualmente sendo definidas de forma arbitrária. Este trabalho visa definir intensidades de corte diferenciadas para grupos de espécies arbóreas comerciais, com diferentes ritmos de crescimento, por unidade de produção, no estado do Amazonas. Utilizou-se o incremento periódico anual percentual em volume, de 26 espécies arbóreas, obtido de parcelas permanentes. O incremento periódico anual, percentual em volume, para efeito diferenciador, considerou 1% como diferença limite. Foram identificadas três intensidades de corte, para as classes comerciais: 24,4% (grupo I, 35,4% (grupo II e 42,4% (grupo III. Considerando a exploração total sustentável por hectare, para as 26 espécies, seria de 11,5 m³ha-1 com intensidade de corte de 37%. O procedimento de cálculo é simples e pode ser utilizado pelos órgãos fiscalizadores, certificadores ou legisladores como balizador do ciclo de corte e taxa de corte.

  12. Possible effects of global environmental changes on Antarctic benthos: a synthesis across five major taxa.

    Science.gov (United States)

    Ingels, Jeroen; Vanreusel, Ann; Brandt, Angelika; Catarino, Ana I; David, Bruno; De Ridder, Chantal; Dubois, Philippe; Gooday, Andrew J; Martin, Patrick; Pasotti, Francesca; Robert, Henri

    2012-02-01

    Because of the unique conditions that exist around the Antarctic continent, Southern Ocean (SO) ecosystems are very susceptible to the growing impact of global climate change and other anthropogenic influences. Consequently, there is an urgent need to understand how SO marine life will cope with expected future changes in the environment. Studies of Antarctic organisms have shown that individual species and higher taxa display different degrees of sensitivity to environmental shifts, making it difficult to predict overall community or ecosystem responses. This emphasizes the need for an improved understanding of the Antarctic benthic ecosystem response to global climate change using a multitaxon approach with consideration of different levels of biological organization. Here, we provide a synthesis of the ability of five important Antarctic benthic taxa (Foraminifera, Nematoda, Amphipoda, Isopoda, and Echinoidea) to cope with changes in the environment (temperature, pH, ice cover, ice scouring, food quantity, and quality) that are linked to climatic changes. Responses from individual to the taxon-specific community level to these drivers will vary with taxon but will include local species extinctions, invasions of warmer-water species, shifts in diversity, dominance, and trophic group composition, all with likely consequences for ecosystem functioning. Limitations in our current knowledge and understanding of climate change effects on the different levels are discussed.

  13. Assessing the completeness of the fossil record using brachiopod Lazarus taxa

    Science.gov (United States)

    Gearty, W.; Payne, J.

    2012-12-01

    Lazarus taxa, organisms that disappear from the fossil record only to reappear later, provide a unique opportunity to assess the completeness of the fossil record. In this study, we apply logistic regression to quantify the associations of body size, geographic extent, and species diversity with the probability of being a Lazarus genus using the Phanerozoic fossil record of brachiopods. We find that both the geographic range and species diversity of a genus are inversely associated with the probability of being a Lazarus taxon in the preceding or succeeding stage. In contrast, body size exhibits little association with the probability of becoming a Lazarus taxon. A model including species diversity and geographic extent as predictors performs best among all combinations examined, whereas a model including only shell size as a predictor performs the worst - even worse than a model that assumes Lazarus taxa are randomly drawn from all available genera. These findings suggest that geographic range and species richness data can be used to improve estimates of extensions on the observed fossil ranges of genera and, thereby, better correct for sampling effects in estimates of taxonomic diversity change through the Phanerozoic.

  14. De novo assembly of highly diverse viral populations

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    Yang Xiao

    2012-09-01

    Full Text Available Abstract Background Extensive genetic diversity in viral populations within infected hosts and the divergence of variants from existing reference genomes impede the analysis of deep viral sequencing data. A de novo population consensus assembly is valuable both as a single linear representation of the population and as a backbone on which intra-host variants can be accurately mapped. The availability of consensus assemblies and robustly mapped variants are crucial to the genetic study of viral disease progression, transmission dynamics, and viral evolution. Existing de novo assembly techniques fail to robustly assemble ultra-deep sequence data from genetically heterogeneous populations such as viruses into full-length genomes due to the presence of extensive genetic variability, contaminants, and variable sequence coverage. Results We present VICUNA, a de novo assembly algorithm suitable for generating consensus assemblies from genetically heterogeneous populations. We demonstrate its effectiveness on Dengue, Human Immunodeficiency and West Nile viral populations, representing a range of intra-host diversity. Compared to state-of-the-art assemblers designed for haploid or diploid systems, VICUNA recovers full-length consensus and captures insertion/deletion polymorphisms in diverse samples. Final assemblies maintain a high base calling accuracy. VICUNA program is publicly available at: http://www.broadinstitute.org/scientific-community/science/projects/viral-genomics/ viral-genomics-analysis-software. Conclusions We developed VICUNA, a publicly available software tool, that enables consensus assembly of ultra-deep sequence derived from diverse viral populations. While VICUNA was developed for the analysis of viral populations, its application to other heterogeneous sequence data sets such as metagenomic or tumor cell population samples may prove beneficial in these fields of research.

  15. Ecodesign: um novo paradigma moderno inscrito entre moda e consumo?

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    Andréia Mesacasa

    2010-12-01

    Full Text Available Este artigo pretende analisar as relações existentes entre a modernidade, a moda que rege as formas do vestir, o consumo evidenciado pela sociedade capitalista e suas implicações na prática do ecodesign que integra um novo paradigma no contexto vivenciado pelos indivíduos e a natureza. A modernidade possui como principais características a separação entre tempo-espaço, o desenvolvimento dos mecanismos de desencaixe e a apropriação reflexiva do conhecimento que desloca a vida social da fixidez da tradição. Nesta perspectiva, a modernidade associa-se à racionalização, que impõe a destruição dos costumes e crenças tradicionais, sendo marcada por um apetite pelo novo. O apetite pelo novo é condição de existência da moda, traduzida pelo incessante processo de mudança de formas e estilos. Atuando em uma sociedade capitalista, moda está relacionada com o consumo e a obsolescência programada, que promovem a cultura do excesso contribuindo com a produção de resíduos e elevando os danos ambientais. Na atualidade, a relação entre o mundo dos objetos e o ambiente natural é intermediada pelo ecodesign, entendido como modelo projetual orientado por critérios ecológicos, que sintetiza um vasto conjunto de atividades projetuais, com a finalidade de enfrentar os temas postos pela questão ambiental partindo do redesenho dos produtos industriais.

  16. Functional diversity response to hardwood forest management varies across taxa and spatial scales.

    Science.gov (United States)

    Murray, Bryan D; Holland, Jeffrey D; Summerville, Keith S; Dunning, John B; Saunders, Michael R; Jenkins, Michael A

    2017-03-15

    Contemporary forest management offers a trade-off between the potential positive effects of habitat heterogeneity on biodiversity, and the potential harm to mature-forest communities caused by habitat loss and perforation of the forest canopy. While the response of taxonomic diversity to forest management has received a great deal of scrutiny, the response of functional diversity is largely unexplored. However, functional diversity may represent a more direct link between biodiversity and ecosystem function. To examine how forest management affects diversity at multiple spatial scales, we analyzed a long-term dataset that captured changes in taxonomic and functional diversity of moths (Lepidoptera), longhorned beetles (Coleoptera: Cerambycidae), and breeding birds in response to contemporary silvicultural systems in oak-hickory hardwood forests. We used these datasets to address the following questions: how do even- and uneven-aged silvicultural systems affect taxonomic and functional diversity at the scale of managed landscapes compared to the individual harvested and unharvested forest patches that comprise the landscapes, and how do these silvicultural systems affect the functional similarity of assemblages at the scale of managed landscapes and patches? Due to increased heterogeneity within landscapes, we expected even-aged silviculture to increase and uneven-aged silviculture to decrease functional diversity at the landscape level regardless of impacts at the patch level. Functional diversity responses were taxon-specific with respect to the direction of change and time since harvest. Responses were also consistent across patch and landscape levels within each taxon. Moth assemblage species richness, functional richness, and functional divergence were negatively affected by harvesting, with stronger effects resulting from uneven-aged than even-aged management. Longhorned beetle assemblages exhibited a peak in species richness two years after harvesting, while

  17. Selection of nontarget arthropod taxa for field research on transgenic insecticidal crops: using empirical data and statistical power.

    Science.gov (United States)

    Prasifka, J R; Hellmich, R L; Dively, G P; Higgins, L S; Dixon, P M; Duan, J J

    2008-02-01

    One of the possible adverse effects of transgenic insecticidal crops is the unintended decline in the abundance of nontarget arthropods. Field trials designed to evaluate potential nontarget effects can be more complex than expected because decisions to conduct field trials and the selection of taxa to include are not always guided by the results of laboratory tests. Also, recent studies emphasize the potential for indirect effects (adverse impacts to nontarget arthropods without feeding directly on plant tissues), which are difficult to predict because of interactions among nontarget arthropods, target pests, and transgenic crops. As a consequence, field studies may attempt to monitor expansive lists of arthropod taxa, making the design of such broad studies more difficult and reducing the likelihood of detecting any negative effects that might be present. To improve the taxonomic focus and statistical rigor of future studies, existing field data and corresponding power analysis may provide useful guidance. Analysis of control data from several nontarget field trials using repeated-measures designs suggests that while detection of small effects may require considerable increases in replication, there are taxa from different ecological roles that are sampled effectively using standard methods. The use of statistical power to guide selection of taxa for nontarget trials reflects scientists' inability to predict the complex interactions among arthropod taxa, particularly when laboratory trials fail to provide guidance on which groups are more likely to be affected. However, scientists still may exercise judgment, including taxa that are not included in or supported by power analyses.

  18. The historical town core and traffic in Novo mesto

    Directory of Open Access Journals (Sweden)

    Lilijana Jankovič

    2001-01-01

    Full Text Available The historical town core of Novo mesto is subject to intolerable traffic conditions. Individual car use is suffocating the town core, but simultaneously good access is essential for shopkeepers and other inhabitants since buses don’t go there. The project proposes changes to the traffic regime, its basic goals are to redesign the town square into a pedestrian place and to eliminate transitory traffic by rerouting vehicles to less burdened side roads. It introduces short-term parking, smaller parking garages in the core and larger parking spaces on the edge and routes the buses through the town core.

  19. Sonhos de Nabucodonosor: aspectos da propaganda do Estado Novo Pernambucano

    OpenAIRE

    2005-01-01

    Este trabalho tem por objetivo explorar as diversas formas e imagens criadas e utilizadas pela propaganda oficial do Estado Novo pernambucano durante seu período de vigência, entre 1937 e 1945, mais particularmente em seus primeiros cinco anos, a grosso modo, o período em que o Brasil ainda não se envolvera na II Guerra Mundial. Durante estes oito anos, Pernambuco foi governado pelo interventor federal Agamenon Magalhães. A partir da análise do que ainda resta do vasto mater...

  20. Uncovering Clinical Features of De Novo Philadelphia Positive Myelodysplasia

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    Aristides Armas

    2017-01-01

    Full Text Available Myelodysplastic syndrome (MDS is cytogenetically heterogeneous and retains variable risk for acute myeloid leukemia transformation. Though not yet fully understood, there is an association between genetic abnormalities and defects in gene expression. The functional role for infrequent cytogenetic alteration remains unclear. An uncommon chromosomic abnormality is the presence of the Philadelphia (Ph chromosome. Here, we report a patient with Ph+ MDS treated with low dose Dasatinib who achieved hematologic response for 7 months. In addition, we also examined the English literature on all de novo Ph + MDS cases between 1996 and 2015 to gain insight into clinical features and outcome.

  1. Uncovering Clinical Features of De Novo Philadelphia Positive Myelodysplasia

    Science.gov (United States)

    Armas, Aristides; Chen, Chen; Mims, Martha

    2017-01-01

    Myelodysplastic syndrome (MDS) is cytogenetically heterogeneous and retains variable risk for acute myeloid leukemia transformation. Though not yet fully understood, there is an association between genetic abnormalities and defects in gene expression. The functional role for infrequent cytogenetic alteration remains unclear. An uncommon chromosomic abnormality is the presence of the Philadelphia (Ph) chromosome. Here, we report a patient with Ph+ MDS treated with low dose Dasatinib who achieved hematologic response for 7 months. In addition, we also examined the English literature on all de novo Ph + MDS cases between 1996 and 2015 to gain insight into clinical features and outcome. PMID:28321349

  2. De Novo Assembly of Highly Substituted Morpholines and Piperazines

    Science.gov (United States)

    2017-01-01

    The morpholine and piperazine with their remarkable physical and biochemical properties are popular heterocycles in organic and medicinal chemistry used in rational property design. However, in the majority of cases these rings are added to an existing molecule in a building block approach thus limiting their substitution pattern and diversity. Here we introduce a versatile de novo synthesis of the morpholine and piperazine rings using multicomponent reaction chemistry. The large scale amenable building blocks can be further substituted at up to four positions, making this a very versatile scaffold synthesis strategy. Our methods thus fulfill the increasing demand for novel building block design and nontraditional scaffolds which previously were not accessible PMID:28102692

  3. [Three cases of de novo multiple myeloma after kidney transplantation].

    Science.gov (United States)

    Nieto-Ríos, John Fredy; Zuluaga, Mónica; Serna, Lina María; Aristizábal, Arbey; Ocampo-Kohn, Catalina; Gálvez, Kenny Mauricio; Flórez, Adriana Alejandra; Zuluaga, Gustavo

    2016-12-01

    Light chain-associated kidney compromise is frequent in patients with monoclonal gammopathies; it affects the glomeruli or the tubules, and its most common cause is multiple myeloma. It may develop after a kidney transplant due to recurrence of a preexisting multiple myeloma or it can be a de novo disease manifesting as graft dysfunction and proteinuria. A kidney biopsy is always necessary to confirm the diagnosis.We describe three cases of kidney graft dysfunction due to multiple myeloma in patients without presence of the disease before the transplant.

  4. [De novo growth of a capillary hemangioma of the conjunctiva].

    Science.gov (United States)

    Fernández-Vega Cueto, L; Tresserra, F; de la Paz, M F

    2014-03-01

    A 22-year-old woman patient, diagnosed with an inclusion cyst of the conjunctiva in the nasal sector of the left eye, who after 2 shot/needle injections in the lesion came to our clinic with a dense subconjunctival hemorrhage in four quadrants and with severe pain. After excision biopsy, a capillary hemangioma of the conjunctiva was diagnosed. Conjunctival capillary hemangioma is mainly a benign lesion, asymptomatic and mostly congenital in origin, its progression or de novo growth is rare in adulthood. Copyright © 2012 Sociedad Española de Oftalmología. Published by Elsevier Espana. All rights reserved.

  5. Two new species and one subspecies of Craniophora Snellen, 1867 (Lepidoptera, Noctuidae, Acronictinae) from China.

    Science.gov (United States)

    Kiss, Adám; Gyulai, Péter

    2013-01-01

    Three Craniophora taxa from China, C. fujianensis Kiss and Gyulai, sp. n., C. fujianensis hainanensis Kiss and Gyulai, ssp. n. and C. sichuanensis Kiss, Gyulai and Saldaitis, sp. n., are newly described. Adult habitus and male genitalia are illustrated and compared with those of C. harmandi (Poujade) and C. praeclara (Graeser). Females of the new taxa are unknown.

  6. Butterflies of the Bodoquena Plateau in Brazil (Lepidoptera, Papilionoidea)

    Science.gov (United States)

    de Souza, Paulo Ricardo Barbosa; Guillermo-Ferreira, Rhainer

    2015-01-01

    Abstract Butterflies and moths are found in all terrestrial environments and require efforts for a better understanding of its mega-diversity. These taxa have been the subject of several studies involving phylogeny, ecology and environmental impacts. Nevertheless, several areas in the tropics remain unexplored, resulting in gaps in the taxonomic composition and distribution of butterflies in endemic environments. Therefore, a survey of the butterfly fauna of the Bodoquena Plateau in Brazil was conducted. This area consists of tropical Atlantic Forests, with marginal influences of Savannah, Chaco and Pantanal. Sampling was carried out in 20 locations using Van Someren Rydon traps and insect nets between November 2009 and April 2015. Active collection of individuals was conducted from 9:00 to 17:00h, totaling 240 hours of sampling effort. In total, we registered 768 individuals belonging to 146 species of 98 genera, six families and 18 subfamilies. Nymphalidae was the richest family (84 species), followed by Hesperiidae (22 species), Riodinidae (14 species), Pieridae (12) Papilionidae (11 species) and Lycaenidae (five species). We sampled 239 nymphalids in traps, with 48 species, 30 genera, 15 tribes and five subfamilies. The most common species were Eunica macris (Godart, 1824), Dynamine artemisia (Fabricius, 1793) and Memphis moruus (Fabricius, 1775). Therefore, this study contributes to the knowledge of the Neotropical butterfly diversity and distribution, providing 37 new records and supporting the use of wildlife inventories as important tools for the knowledge of tropical forests biodiversity and conservation. PMID:26798308

  7. Butterflies of the Bodoquena Plateau in Brazil (Lepidoptera, Papilionoidea).

    Science.gov (United States)

    de Souza, Paulo Ricardo Barbosa; Guillermo-Ferreira, Rhainer

    2015-01-01

    Butterflies and moths are found in all terrestrial environments and require efforts for a better understanding of its mega-diversity. These taxa have been the subject of several studies involving phylogeny, ecology and environmental impacts. Nevertheless, several areas in the tropics remain unexplored, resulting in gaps in the taxonomic composition and distribution of butterflies in endemic environments. Therefore, a survey of the butterfly fauna of the Bodoquena Plateau in Brazil was conducted. This area consists of tropical Atlantic Forests, with marginal influences of Savannah, Chaco and Pantanal. Sampling was carried out in 20 locations using Van Someren Rydon traps and insect nets between November 2009 and April 2015. Active collection of individuals was conducted from 9:00 to 17:00h, totaling 240 hours of sampling effort. In total, we registered 768 individuals belonging to 146 species of 98 genera, six families and 18 subfamilies. Nymphalidae was the richest family (84 species), followed by Hesperiidae (22 species), Riodinidae (14 species), Pieridae (12) Papilionidae (11 species) and Lycaenidae (five species). We sampled 239 nymphalids in traps, with 48 species, 30 genera, 15 tribes and five subfamilies. The most common species were Eunica macris (Godart, 1824), Dynamine artemisia (Fabricius, 1793) and Memphis moruus (Fabricius, 1775). Therefore, this study contributes to the knowledge of the Neotropical butterfly diversity and distribution, providing 37 new records and supporting the use of wildlife inventories as important tools for the knowledge of tropical forests biodiversity and conservation.

  8. Influência da capacidade de campo na taxa de crescimento do cafeeiro conilon

    Directory of Open Access Journals (Sweden)

    Maria Christina Junger Delôgo Dardengo

    2010-02-01

    Full Text Available O objetivo deste trabalho foi avaliar a influência da capacidade de campo (CC na taxa de crescimento do cafeeiro conilon a partir da adoção de três tensões: 0,006 MPa (CC1, 0,010 MPa (CC2 e 0,033 MPa (CC3, em dois tipos de solo (Latossolo Vermelho-Amarelo e Argissolo Vermelho-Amarelo. O experimento foi montado em casa de vegetação no Núcleo de Estudos e de Difusão de Tecnologia em Floresta, Recursos Hídricos e Agricultura Sustentável, município de Jerônimo Monteiro, Espírito Santo. A espécie vegetal utilizada foi a Coffea canephora Pierre ex A. Froehner, variedade Robusta Tropical (EMCAPER 8151, cultivada em vaso de 12 litros, por um período de 255 dias. As análises de crescimento foram realizadas 15 dias após o transplantio das mudas e no final do experimento, para determinação de matéria seca total e área foliar. O teor de umidade do solo na capacidade de campo varia com a tensão adotada em sua determinação. As maiores taxas de crescimentos relativo e absoluto do cafeeiro conilon foram obtidas quando a umidade do solo foi mantida na capacidade de campos determinada na tensão de 0,010 MPa no Latossolo Vermelho­Amarelo e de 0,006 MPa no Argissolo Vermelho-Amarelo. As menores taxas de crescimento da cultura foram observa­das na capacidade de campo determinada na tensão de 0,033 MPa, o que inviabiliza a sua adoção na estimativa da lâmina de irrigação utilizando-se a câmara de pressão de Richards.

  9. Complex interactions between regional dispersal of native taxa and an invasive species.

    Science.gov (United States)

    Strecker, Angela L; Arnott, Shelley E

    2010-04-01

    In the event of an environmental disturbance, dispersal of native taxa may provide species and genetic diversity to ecosystems, increasing the likelihood that there will be species and genotypes present that are less vulnerable to the disturbance. This may allow communities to maintain functioning during a disturbance and may be particularly important when the perturbation is novel to the system, such as the establishment of an invasive species. We examined how dispersal of native species may influence crustacean zooplankton communities in freshwater lakes invaded by the invertebrate predator, Bythotrephes longimanus. Using large enclosures, we experimentally tested the effect of dispersal on zooplankton community abundance, richness, and composition in (1) a community invaded by Bythotrephes, (2) the same community with the invader removed, and (3) a community that was never invaded. Dispersal increased zooplankton community abundance and richness; however, these effects were usually only significant in the invader-removed treatment. Dispersal tended to make the invader-removed communities more similar to never-invaded communities in abundance, richness, and composition. Dispersal had little effect on zooplankton abundance in the invaded community; however, richness significantly increased, and the community composition changed to resemble a never-invaded community by the end of the experiment. Our results have implications for understanding the role of dispersal during transitory states in communities. Dispersal of native taxa may be particularly important during the period between the arrival and broad-scale establishment of Bythotrephes, as dispersal through space or time (i.e., from resting eggs) may rapidly increase zooplankton abundance when the invader is absent or in low abundances. Overall, our results suggest that communities with strong local predatory and competitive interactions may be closed to immigration from colonists, but that invasive species

  10. Coralsnake Venomics: Analyses of Venom Gland Transcriptomes and Proteomes of Six Brazilian Taxa

    Science.gov (United States)

    Aird, Steven D.; da Silva, Nelson Jorge; Qiu, Lijun; Villar-Briones, Alejandro; Saddi, Vera Aparecida; Pires de Campos Telles, Mariana; Grau, Miguel L.; Mikheyev, Alexander S.

    2017-01-01

    Venom gland transcriptomes and proteomes of six Micrurus taxa (M. corallinus, M. lemniscatus carvalhoi, M. lemniscatus lemniscatus, M. paraensis, M. spixii spixii, and M. surinamensis) were investigated, providing the most comprehensive, quantitative data on Micrurus venom composition to date, and more than tripling the number of Micrurus venom protein sequences previously available. The six venomes differ dramatically. All are dominated by 2–6 toxin classes that account for 91–99% of the toxin transcripts. The M. s. spixii venome is compositionally the simplest. In it, three-finger toxins (3FTxs) and phospholipases A2 (PLA2s) comprise >99% of the toxin transcripts, which include only four additional toxin families at levels ≥0.1%. Micrurus l. lemniscatus venom is the most complex, with at least 17 toxin families. However, in each venome, multiple structural subclasses of 3FTXs and PLA2s are present. These almost certainly differ in pharmacology as well. All venoms also contain phospholipase B and vascular endothelial growth factors. Minor components (0.1–2.0%) are found in all venoms except that of M. s. spixii. Other toxin families are present in all six venoms at trace levels (venom components differ in each venom. Numerous novel toxin chemistries include 3FTxs with previously unknown 8- and 10-cysteine arrangements, resulting in new 3D structures and target specificities. 9-cysteine toxins raise the possibility of covalent, homodimeric 3FTxs or heterodimeric toxins with unknown pharmacologies. Probable muscarinic sequences may be reptile-specific homologs that promote hypotension via vascular mAChRs. The first complete sequences are presented for 3FTxs putatively responsible for liberating glutamate from rat brain synaptosomes. Micrurus C-type lectin-like proteins may have 6–9 cysteine residues and may be monomers, or homo- or heterodimers of unknown pharmacology. Novel KSPIs, 3× longer than any seen previously, appear to have arisen in three species

  11. Coralsnake Venomics: Analyses of Venom Gland Transcriptomes and Proteomes of Six Brazilian Taxa

    Directory of Open Access Journals (Sweden)

    Steven D. Aird

    2017-06-01

    Full Text Available Venom gland transcriptomes and proteomes of six Micrurus taxa (M. corallinus, M. lemniscatus carvalhoi, M. lemniscatus lemniscatus, M. paraensis, M. spixii spixii, and M. surinamensis were investigated, providing the most comprehensive, quantitative data on Micrurus venom composition to date, and more than tripling the number of Micrurus venom protein sequences previously available. The six venomes differ dramatically. All are dominated by 2–6 toxin classes that account for 91–99% of the toxin transcripts. The M. s. spixii venome is compositionally the simplest. In it, three-finger toxins (3FTxs and phospholipases A2 (PLA2s comprise >99% of the toxin transcripts, which include only four additional toxin families at levels ≥0.1%. Micrurus l. lemniscatus venom is the most complex, with at least 17 toxin families. However, in each venome, multiple structural subclasses of 3FTXs and PLA2s are present. These almost certainly differ in pharmacology as well. All venoms also contain phospholipase B and vascular endothelial growth factors. Minor components (0.1–2.0% are found in all venoms except that of M. s. spixii. Other toxin families are present in all six venoms at trace levels (<0.005%. Minor and trace venom components differ in each venom. Numerous novel toxin chemistries include 3FTxs with previously unknown 8- and 10-cysteine arrangements, resulting in new 3D structures and target specificities. 9-cysteine toxins raise the possibility of covalent, homodimeric 3FTxs or heterodimeric toxins with unknown pharmacologies. Probable muscarinic sequences may be reptile-specific homologs that promote hypotension via vascular mAChRs. The first complete sequences are presented for 3FTxs putatively responsible for liberating glutamate from rat brain synaptosomes. Micrurus C-type lectin-like proteins may have 6–9 cysteine residues and may be monomers, or homo- or heterodimers of unknown pharmacology. Novel KSPIs, 3× longer than any seen

  12. Type specimens of taxa of Artemisia L. (Asteraceae from Siberia and the Far East kept in the Herbarium of V.L. Komarov Botanical Insitute

    Directory of Open Access Journals (Sweden)

    A. A. Korobkov

    2015-04-01

    Full Text Available Typification of 97 Artemisia (Asteraceae taxa from Siberia and the Far East kept in the Herbarium of V.L. Komarov Botanical Institute was carried out. Holotypes for 39 taxa, lectotypes for 48 taxa, 28 syntypes and 4 isotypes are given.

  13. Mariposas del estado de Morelos, México (Lepidoptera: Papilionoidea Butterflies of the state of Morelos, Mexico (Lepidoptera: Papilionoidea

    Directory of Open Access Journals (Sweden)

    Mercedes Luna-Reyes

    2012-09-01

    Full Text Available Se conjuntó la información disponible para obtener una lista exhaustiva de los ropalóceros del estado de Morelos: 331 taxones de nivel específico pertenecientes a 154 géneros; 18 subfamilias y 5 familias, a partir de 29 981 ejemplares provenientes de las colecciones mexicanas y extranjeras de lepidópteros en la megabase MARIPOSA, la hemerobibliografía especializada y los inventarios faunísticos previos. Con base en estos datos se trazó un esbozo histórico de las recolecciones y recolectores, destacando lo realizado en Morelos desde el siglo XVI. Se compara su riqueza con la de estados contiguos y se advierte mayor similitud con la de Guerrero, con más del 90%. Se encontró que Cuernavaca es la localidad más diversa del estado, puesto que contiene más de la mitad de las especies; en 21 localidades está representado el 95% de los papilionoideos, que han sido satisfactoriamente recolectadas. Los municipios mejor estudiados son Tepoztlán, Tlaquiltenango y Huitzilac. Destaca el estado de Morelos por el alto porcentaje de taxones endémicos de México que presenta, esto es, un tercio del total para el país.We set the information available for a comprehensive list of the state of Morelos Rhopalocera: 331 taxa specific level, contained in 154 genera, 18 subfamilies and 5 families from 29 981 lepidopterists specimens from Mexican and foreign collections contained in the megabase MARIPOSA, it is specialized in wildlife inventories. Based on this, we performed a historical sketch of collecting and collectors, highlighting the work in the state since the sixteenth century. We compared the richness with contiguous states, we found a greater similarity with the state of Guerrero, with more than 90%. We found that Cuernavaca is the town with more diversity, as it contains more than half of the species in the state, 21 sites have been successfully collected, they represented in 95% of the Papilionoidea. Municipalities best studied were Tepoztlan

  14. Flavin-dependent monooxygenases as a detoxification mechanism in insects: new insights from the arctiids (lepidoptera.

    Directory of Open Access Journals (Sweden)

    Sven Sehlmeyer

    Full Text Available Insects experience a wide array of chemical pressures from plant allelochemicals and pesticides and have developed several effective counterstrategies to cope with such toxins. Among these, cytochrome P450 monooxygenases are crucial in plant-insect interactions. Flavin-dependent monooxygenases (FMOs seem not to play a central role in xenobiotic detoxification in insects, in contrast to mammals. However, the previously identified senecionine N-oxygenase of the arctiid moth Tyria jacobaeae (Lepidoptera indicates that FMOs have been recruited during the adaptation of this insect to plants that accumulate toxic pyrrolizidine alkaloids. Identification of related FMO-like sequences of various arctiids and other Lepidoptera and their combination with expressed sequence tag (EST data and sequences emerging from the Bombyx mori genome project show that FMOs in Lepidoptera form a gene family with three members (FMO1 to FMO3. Phylogenetic analyses suggest that FMO3 is only distantly related to lepidopteran FMO1 and FMO2 that originated from a more recent gene duplication event. Within the FMO1 gene cluster, an additional gene duplication early in the arctiid lineage provided the basis for the evolution of the highly specific biochemical, physiological, and behavioral adaptations of these butterflies to pyrrolizidine-alkaloid-producing plants. The genes encoding pyrrolizidine-alkaloid-N-oxygenizing enzymes (PNOs are transcribed in the fat body and the head of the larvae. An N-terminal signal peptide mediates the transport of the soluble proteins into the hemolymph where PNOs efficiently convert pro-toxic pyrrolizidine alkaloids into their non-toxic N-oxide derivatives. Heterologous expression of a PNO of the generalist arctiid Grammia geneura produced an N-oxygenizing enzyme that shows noticeably expanded substrate specificity compared with the related enzyme of the specialist Tyria jacobaeae. The data about the evolution of FMOs within lepidopteran insects

  15. Comparative embryogenesis of Mecoptera and Lepidoptera with special reference to the abdominal prolegs.

    Science.gov (United States)

    Kou, Li-Xuan; Hua, Bao-Zhen

    2016-05-01

    The eruciform larvae of holometabolous insects are primarily characterized by bearing a varying number of abdominal prolegs in addition to three pairs of thoracic legs. However, whether the prolegs are evolutionarily homologous among different insect orders is still a disputable issue. We examined the embryonic features and histological structure of the prolegs of the scorpionfly Panorpa byersi Hua and Huang (Mecoptera: Panorpidae) and the Oriental armyworm Mythimna separata (Walker) (Lepidoptera: Noctuidae) to investigate whether the prolegs are homologous between these two holometabolous insect orders. In the scorpionfly, paired lateral process primordia arise on abdominal segments I-VIII (A1-A8) in line with the thoracic legs in early embryonic stages, but degenerate into triangular protuberances in later stages, and paired medial processes appear along the midventral line before dorsal closure and eventually develop into unjointed, cone-shaped prolegs. Histological observation showed that the lumina of the prolegs are not continuous with the hemocoel, differing distinctly from that of the basic appendicular plan of thoracic legs. These results suggest that the prolegs are likely secondary outgrowths in Mecoptera. In the armyworm, lateral process primordia appear on A1-A10 in alignment with the thoracic legs in the early embryonic stages, although only the rudiments on A3-A6 and A10 develop into segmented prolegs with the lumina continuous with the hemocoel and others degenerate eventually, suggesting that the prolegs are true segmental appendages serially homologous with the thoracic legs in Lepidoptera. Therefore, we conclude that the larval prolegs are likely not evolutionarily homologous between Mecoptera and Lepidoptera.

  16. First report of an egg parasitoid reared from Neomusotima conspurcatalis (Lepidoptera: Crambidae) a biological control agent of Lygodium microphyllum (Schizaeales: Lygodiaceae)

    Science.gov (United States)

    Neomusotima conspurcatalis (Lepidoptera: Crambidae) was first released in Florida as a biological control agent of Lygodium microphyllum (Polypodiales: Lygodiaceae), Old World climbing fern, in 2008. The first egg parasitoid, a Trichogramma sp. (Hymenoptera: Trichogrammatidae), was reared from N. co...

  17. Characterization of the mitochondrial genome of the diamondback moth Plutella xylostella (Lepidoptera: Plutellidae) and phylogenetic analysis of advanced moths and butterflies.

    Science.gov (United States)

    Wei, Shu-Jun; Shi, Bao-Cai; Gong, Ya-Jun; Li, Qian; Chen, Xue-Xin

    2013-04-01

    Here we determined the mitochondrial genome sequence of a notorious pest, the diamondback moth Plutella xylostella (Lepidoptera: Yponomeutoidea: Plutellidae). The mitochondrial genome contains 37 typical animal mitochondrial genes and an A+T-rich region. The gene arrangement is identical to that of other ditrysian lepidopteran mitochondrial genomes, but different from the ancestral gene arrangement in the non-ditrysian Hepialidae of Lepidoptera. The start codon of the cox1 gene is CGA, which is dissimilar to its homologs in most other insects. In Lepidoptera, cox1 and cox2 have low nucleotide diversities, while the nad6, nad2, and nad3 genes are highly variable. Phylogenetic analyses uncovered the reciprocal monophyly of Ditrysia, Apoditrysia, Obtectomera, and Macrolepidoptera, and the placement of the Hesperiidae within Papilionoidea. Our analyses suggest that the complete mitochondrial genome sequences are a promising marker toward fully resolving the phylogenetic relationships within Lepidoptera.

  18. The influence of vegetation and landscape structural connectivity on butterflies (Lepidoptera: Papilionoidea and Hesperiidae), Carabids (Coleoptera: Carabidae), Syrphids (Diptera: Syrphidae), and sawflies (Hymenoptera: Symphyta) in Northern Italy farmland

    NARCIS (Netherlands)

    Burgio, G.; Sommaggio, D.; Marini, M.; Chiarucci, A.; Landi, S.; Fabbri, R.; Pesarini, F.; Genghini, M.; Ferrari, R.; Muzzi, E.; Lenteren, van J.C.; Masetti, A.

    2015-01-01

    Landscape structure as well as local vegetation influence biodiversity in agroecosystems. A study was performed to evaluate the effect of floristic diversity, vegetation patterns, and landscape structural connectivity on butterflies (Lepidoptera: Papilionoidea and Hesperiidae), carabids (Coleoptera:

  19. Effect of learning on the oviposition preference of field-collected and laboratory-reared Chilo partellus (Lepidoptera: Crambidae) populations

    NARCIS (Netherlands)

    Glas, J.J.; Berg, van den J.; Potting, R.P.J.

    2007-01-01

    Recent studies show that Vetiver grass, (Vetiveria zizanioides (L.) Nash), may have potential as a dead-end trap crop in an overall habitat management strategy for the spotted stem borer, Chilo partellus (Swinhoe) (Lepidoptera: Crambidae). Vetiver grass is highly preferred for oviposition, in spite

  20. Use of benzimidazole agar plates to assess fall armyworm (Lepidoptera: Noctuidae) feeding on excised maize and sorghum leaves

    Science.gov (United States)

    The fall armyworm, Spodoptera frugiperda (J.E. Smith) (Lepidoptera: Noctuidae) is an economically significant pest of sorghum and maize. To screen sorghum and maize germplasm for resistance to fall armyworm feeding, field, greenhouse, or lab bioassays are often utilized individually or in combinatio...

  1. Evaluation of whorl damage by fall armyworm (Lepidoptera:Noctuidae) on field and greenhouse grown sweet sorghum plants

    Science.gov (United States)

    The fall armyworm [Spodoptera frugiperda (Lepidoptera: Noctuidae)] is an economically important pest of sorghum [Sorghum bicolor (L) Moench]. However, resistance to fall armyworm in sweet sorghum has not been extensively studied. A collection of primarily sweet sorghum accessions were evaluated in t...

  2. Effect of learning on the oviposition preference of field-collected and laboratory-reared Chilo partellus (Lepidoptera: Crambidae) populations

    NARCIS (Netherlands)

    Glas, J.J.; Berg, van den J.; Potting, R.P.J.

    2007-01-01

    Recent studies show that Vetiver grass, (Vetiveria zizanioides (L.) Nash), may have potential as a dead-end trap crop in an overall habitat management strategy for the spotted stem borer, Chilo partellus (Swinhoe) (Lepidoptera: Crambidae). Vetiver grass is highly preferred for oviposition, in spite

  3. Biology, herbivory, and host specificity of Antiblemma leucocyma (Lepidoptera: Noctuidae) on Miconia calvescens DC. (Melastomataceae) in Brazil

    Science.gov (United States)

    F. R. Badenes-Perez; M. T. Johnson

    2008-01-01

    Miconia calvescens DC. (Melastomataceae) is an invasive tree considered one of the greatest threats to natural ecosystems of Hawaii and other Pacific islands. The potential for using the defoliator Antiblemma leucocyma (Lepidoptera: Noctuidae) as a biological control agent of M. calvescens was evaluated in...

  4. Relative susceptibility of sunflower maintainer lines and resistance sources to natural infestations of the banded sunflower moth (Lepidoptera: Tortricidae)

    Science.gov (United States)

    The banded sunflower moth, Cochylis hospes Walsingham (Lepidoptera: Tortricidae), is a significant seed-feeding pest of sunflowers in North America. Though some wild Helianthus spp., interspecific crosses, and H. annuus cultivars (that precede hybrid sunflower breeding) have low susceptibility to ba...

  5. Egg hatch and survival and development of beet webworm (Lepidoptera: Crambidae) larvae at different combinations of temperature and relative humidity

    Science.gov (United States)

    To understand the role that temperature and humidity play in the population dynamics of the beet webworm, Loxostege sticticalis L. (Lepidoptera: Crambidae), egg hatchability, survival of 1st - 5th instars, survival of the complete larval stage, survival curves, and larval development rates were inve...

  6. Influence of holding temperature and irradiation on field performance of mass-reared Thaumatotibia leucotreta (Lepidoptera: Tortricidae)

    Science.gov (United States)

    The Sterile Insect Technique (SIT) as an integral component to the area-wide integrated management of the false codling moth, Thaumatotibia leucotreta (Meyrick) (Lepidoptera: Tortricidae), was successfully implemented in the Western Cape region of South Africa and subsequently expanded to citrus are...

  7. Global warming and the change of butterfly distributions: a new opportunity for species diversity or a severe threat (Lepidoptera)?

    NARCIS (Netherlands)

    Ryrholm, N.

    2003-01-01

    Global warming and the change of butterfly distributions: a new opportunity for species diversity or a severe threat (Lepidoptera)? In order to assess the influence of climatic changes on the distribution of insects, the ranges of nonmigratory European butterfly species have been studied. This study

  8. Phenology of Lymantria monacha (Lepidoptera:Lymantriidae) laboratory reared on spruce foliage or a newly developed artificial diet

    Science.gov (United States)

    Melody A. Keena; Alice Vandel; Oldrich. Pultar

    2010-01-01

    Lymantria monacha (L.) (Lepidoptera: Lymantriidae) is a Eurasian pest of conifers that has potential for accidental introduction into North America. The phenology over the entire life cycle for L. monacha individuals from the Czech Republic was compared on Picea glauca (Moench) Voss (white spruce) and a newly...

  9. Revealing the elusive sex pheromone of the renowned cactus moth, Cactoblastis cactorum (Lepidoptera:Pyralidae): A tribute to Robert Heath

    Science.gov (United States)

    The South American cactus moth, Cactoblastis cactorum (Berg.) (Lepidoptera: Pyralidae), became famous as a biocontrol agent during campaigns in Australia and South Africa to control exotic weedy Opuntia spp. During these campaigns, monitoring the impact and success of the cactus moth did not requir...

  10. Performance improvement through quality evaluations of sterile cactus moths, Cactoblastis cactorum (Lepidoptera: Pyralidae), mass-reared at two insectaries

    Science.gov (United States)

    A bi-national program was established by Mexico and the United States to mitigate the threat of Cactoblastis cactorum (Berg) (Lepidoptera: Pyralidae), an invasive herbivore from South America, to native Opuntia spp. biodiversity and Opuntia-based industries. Mass-rearing, sterilization, and transpo...

  11. A simple method suitable to study de novo root organogenesis

    Directory of Open Access Journals (Sweden)

    Xiaodong eChen

    2014-05-01

    Full Text Available De novo root organogenesis is the process in which adventitious roots regenerate from detached or wounded plant tissues or organs. In tissue culture, appropriate types and concentrations of plant hormones in the medium are critical for inducing adventitious roots. However, in natural conditions, regeneration from detached organs is likely to rely on endogenous hormones. To investigate the actions of endogenous hormones and the molecular mechanisms guiding de novo root organogenesis, we developed a simple method to imitate natural conditions for adventitious root formation by culturing Arabidopsis thaliana leaf explants on B5 medium without additive hormones. Here we show that the ability of the leaf explants to regenerate roots depends on the age of the leaf and on certain nutrients in the medium. Based on these observations, we provide examples of how this method can be used in different situations, and how it can be optimized. This simple method could be used to investigate the effects of various physiological and molecular changes on the regeneration of adventitious roots. It is also useful for tracing cell lineage during the regeneration process by differential interference contrast observation of -glucuronidase staining, and by live imaging of proteins labeled with fluorescent tags.

  12. De novo Evolution of a Small Choroidal Melanoma

    Science.gov (United States)

    Aleksidze, Nino; Medina, Carlos A.; Singh, Arun D.

    2015-01-01

    Aim To report the evolution of a de novo choroidal melanoma. Method This is a case report of a 22-year-old white male patient who has been undergoing periodic examination for a choroidal ‘freckle’ since 10 years of age. Results In 2007, a fundus photograph of the left eye showed a nondescript area of choroidal hyperpigmentation temporal to the fovea. Progressive growth was observed and, by 2012, the lesion had become well circumscribed and raised. One year later, a 4.5 × 4.5 × 1.5 mm, dome-shaped, pigmented, choroidal mass with subretinal fluid and orange pigmentation was evident. The lesion was classified as a small choroidal melanoma. Six months after plaque radiotherapy, tumor regression with total resolution of the subretinal fluid was documented. Conclusion The distinction between small choroidal melanoma and choroidal nevus is not absolute; therefore, some choroidal melanomas may initially be mislabeled as choroidal nevi because of their small size until continued growth identifies them to be small choroidal melanomas. In our case, the documented growth of the choroidal lesion on each consecutive visit and its high-risk features strongly suggest that it had been a melanoma from the beginning. To our knowledge, this is only the second documented case of a de novo evolution of a small choroidal melanoma. PMID:27231689

  13. Molecular characterization of de novo secondary trisomy 13

    Energy Technology Data Exchange (ETDEWEB)

    Shaffer, L.G.; McCaskill, C.; Han, Jin-Yeong [Baylor College of Medicine, Houston, TX (United States); Choo, K.H.A. [Murdoch Institute, Melbourne (Australia); Cutillo, D.M.; Donnenfeld, A.E. [Pennyslvania Hospital, PA (United States); Weiss, L.; Van Dyke, D.L. [Henry Ford Hospital, Detroit, MI (United States)

    1994-11-01

    Unbalanced Robertsonian translocations are a significant cause of mental retardation and fetal wastage. The majority of homologous rearrangements of chromosome 21 in Down syndrome have been shown to be isochromosomes. Aside from chromosome 21, very little is known about other acrocentric homologous rearrangements. In this study, four cases of de novo secondary trisomy 13 are presented. FISH using alpha-satellite sequences, rDNA, and a pTRI-6 satellite I sequence specific to the short arm of chromosome 13 showed all four rearrangements to be dicentric an apparently devoid of ribosomal genes. Three of four rearrangements retained the pTRI-6 satellite I sequence. Case 1 was the exception, showing a deletion of this sequence in the rearrangement, although both parental chromosomes 13 had strong positive hybridization signals. Eleven microsatellite markers from chromosome 13 were also used to characterize the rearrangements. Of the four possible outcomes, one maternal Robertsonian translocation, two paternal isochromosomes, and one maternal isochromosomes were observed. A double recombination was observed in the maternally derived rob(13q13q). No recombination events were detected in any isochromosome. The parental origins and molecular chromosomal structure of these cases are compared with previous studies of de novo acrocentric rearrangements. 20 refs., 3 figs., 2 tabs.

  14. De novo malignant solitary fibrous tumor of the kidney

    Directory of Open Access Journals (Sweden)

    Chen Siu-Chung

    2011-10-01

    Full Text Available Abstract The kidney is a relatively infrequent site for solitary fibrous tumor (SFT. Among the previously reported cases, only two cases of malignant renal SFT developing via dedifferentiation from a pre-existing benign SFT have been reported. Here we reported a case of de novo malignant renal SFT clinically diagnosed as renal cell carcinoma in a 50-year-old woman. The tumor was circumscribed but unencapsulated and showed obvious hemorrhagic necrosis. Microscopically, the tumor was composed of patternless sheets of alternating hypercellular and hypocellular areas of spindle cells displaying mild to moderate nuclear atypia, frequent mitoses up to 8 per 10 high power fields, and a 20% Ki-67 proliferative index. Immunohistochemical studies revealed reactivity for CD34, CD99 and vimentin, with no staining for all other markers, confirming the diagnosis of SFT. No areas of dedifferentiation were seen after extensive sampling. Based on the pathologic and immunohistochemical features, a diagnosis of de novo malignant renal SFT was warranted. Our report expands the spectrum of malignant progression in renal SFTs. Even though this patient has been disease-free for 30 months, long-term follow-up is still mandatory.

  15. De novo malignant solitary fibrous tumor of the kidney.

    Science.gov (United States)

    Hsieh, Tsan-Yu; ChangChien, Yi-Che; Chen, Wen-Hsiang; Chen, Siu-Chung; Chang, Liang-Che; Hwang, Cheng-Cheng; Chein, Hui-Ping; Chen, Jim-Ray

    2011-10-05

    The kidney is a relatively infrequent site for solitary fibrous tumor (SFT). Among the previously reported cases, only two cases of malignant renal SFT developing via dedifferentiation from a pre-existing benign SFT have been reported. Here we reported a case of de novo malignant renal SFT clinically diagnosed as renal cell carcinoma in a 50-year-old woman. The tumor was circumscribed but unencapsulated and showed obvious hemorrhagic necrosis. Microscopically, the tumor was composed of patternless sheets of alternating hypercellular and hypocellular areas of spindle cells displaying mild to moderate nuclear atypia, frequent mitoses up to 8 per 10 high power fields, and a 20% Ki-67 proliferative index. Immunohistochemical studies revealed reactivity for CD34, CD99 and vimentin, with no staining for all other markers, confirming the diagnosis of SFT. No areas of dedifferentiation were seen after extensive sampling. Based on the pathologic and immunohistochemical features, a diagnosis of de novo malignant renal SFT was warranted. Our report expands the spectrum of malignant progression in renal SFTs. Even though this patient has been disease-free for 30 months, long-term follow-up is still mandatory.

  16. Origins of De Novo Genes in Human and Chimpanzee.

    Directory of Open Access Journals (Sweden)

    Jorge Ruiz-Orera

    2015-12-01

    Full Text Available The birth of new genes is an important motor of evolutionary innovation. Whereas many new genes arise by gene duplication, others originate at genomic regions that did not contain any genes or gene copies. Some of these newly expressed genes may acquire coding or non-coding functions and be preserved by natural selection. However, it is yet unclear which is the prevalence and underlying mechanisms of de novo gene emergence. In order to obtain a comprehensive view of this process, we have performed in-depth sequencing of the transcriptomes of four mammalian species--human, chimpanzee, macaque, and mouse--and subsequently compared the assembled transcripts and the corresponding syntenic genomic regions. This has resulted in the identification of over five thousand new multiexonic transcriptional events in human and/or chimpanzee that are not observed in the rest of species. Using comparative genomics, we show that the expression of these transcripts is associated with the gain of regulatory motifs upstream of the transcription start site (TSS and of U1 snRNP sites downstream of the TSS. In general, these transcripts show little evidence of purifying selection, suggesting that many of them are not functional. However, we find signatures of selection in a subset of de novo genes which have evidence of protein translation. Taken together, the data support a model in which frequently-occurring new transcriptional events in the genome provide the raw material for the evolution of new proteins.

  17. Multi-nucleotide de novo Mutations in Humans.

    Directory of Open Access Journals (Sweden)

    Søren Besenbacher

    2016-11-01

    Full Text Available Mutation of the DNA molecule is one of the most fundamental processes in biology. In this study, we use 283 parent-offspring trios to estimate the rate of mutation for both single nucleotide variants (SNVs and short length variants (indels in humans and examine the mutation process. We found 17812 SNVs, corresponding to a mutation rate of 1.29 × 10-8 per position per generation (PPPG and 1282 indels corresponding to a rate of 9.29 × 10-10 PPPG. We estimate that around 3% of human de novo SNVs are part of a multi-nucleotide mutation (MNM, with 558 (3.1% of mutations positioned less than 20kb from another mutation in the same individual (median distance of 525bp. The rate of de novo mutations is greater in late replicating regions (p = 8.29 × 10-19 and nearer recombination events (p = 0.0038 than elsewhere in the genome.

  18. Origins of De Novo Genes in Human and Chimpanzee.

    Science.gov (United States)

    Ruiz-Orera, Jorge; Hernandez-Rodriguez, Jessica; Chiva, Cristina; Sabidó, Eduard; Kondova, Ivanela; Bontrop, Ronald; Marqués-Bonet, Tomàs; Albà, M Mar

    2015-12-01

    The birth of new genes is an important motor of evolutionary innovation. Whereas many new genes arise by gene duplication, others originate at genomic regions that did not contain any genes or gene copies. Some of these newly expressed genes may acquire coding or non-coding functions and be preserved by natural selection. However, it is yet unclear which is the prevalence and underlying mechanisms of de novo gene emergence. In order to obtain a comprehensive view of this process, we have performed in-depth sequencing of the transcriptomes of four mammalian species--human, chimpanzee, macaque, and mouse--and subsequently compared the assembled transcripts and the corresponding syntenic genomic regions. This has resulted in the identification of over five thousand new multiexonic transcriptional events in human and/or chimpanzee that are not observed in the rest of species. Using comparative genomics, we show that the expression of these transcripts is associated with the gain of regulatory motifs upstream of the transcription start site (TSS) and of U1 snRNP sites downstream of the TSS. In general, these transcripts show little evidence of purifying selection, suggesting that many of them are not functional. However, we find signatures of selection in a subset of de novo genes which have evidence of protein translation. Taken together, the data support a model in which frequently-occurring new transcriptional events in the genome provide the raw material for the evolution of new proteins.

  19. Edible Lepidoptera in Mexico: Geographic distribution, ethnicity, economic and nutritional importance for rural people.

    Science.gov (United States)

    Ramos-Elorduy, Julieta; Moreno, José M P; Vázquez, Adolfo I; Landero, Ivonne; Oliva-Rivera, Héctor; Camacho, Víctor H M

    2011-01-06

    In this paper, we reported the butterflies and moths that are consumed in Mexico. We identified 67 species of Lepidoptera that are eaten principally in their larval stage in 17 states of Mexico. These species belong to 16 families: Arctiidae, Bombycidae, Castniidae, Cossidae, Geometridae, Hepialidae, Hesperiidae, Lasiocampidae, Noctuidae, Nymphalidae, Papilionidae, Pieridae, Pyralidae, Saturniidae, Sesiidae, and Sphingidae.Saturniidae, Pieridae, Noctuidae and Nymphalidae were the more species consumed with 16, 11, 9, and 8 species, respectively. The genera with the largest numbers of species were: Phassus, Phoebis, Hylesia and Spodoptera, with three species.Their local distribution, corresponding to each state of Mexico, is also presented.

  20. The aquatic habit and host plants of Paracles klagesi (Rothschild (Lepidoptera, Erebidae, Arctiinae in Brazil

    Directory of Open Access Journals (Sweden)

    Aurélio R. Meneses

    2013-09-01

    Full Text Available The aquatic habit and host plants of Paracles klagesi (Rothschild (Lepidoptera, Erebidae, Arctiinae in Brazil. The aquatic caterpillar Paracles klagesi (Rothschild, 1910 was collected from the headwaters of a stream in an ecotone between Cerrado and Babaçu forest in northeastern Brazil. The single caterpillar found was observed feeding on the macrophyte Tonina fluviatilis Aubl. (Eriocaulaceae and other aquatic plants of the family Nymphaeaceae present in the area, but also accepted as food Elodea canadensis Michx. (Hydrocharitaceae and Cabomba sp. (Cabombaceae under laboratory conditions.