Meningococcal X polysaccharide quantification by high-performance anion-exchange chromatography using synthetic N-acetylglucosamine-4-phosphate as standard.

Science.gov (United States)

Micoli, F; Adamo, R; Proietti, D; Gavini, M; Romano, M R; MacLennan, C A; Costantino, P; Berti, F

2013-11-15

A method for meningococcal X (MenX) polysaccharide quantification by high-performance anion-exchange chromatography with pulsed amperometric detection (HPAEC-PAD) is described. The polysaccharide is hydrolyzed by strong acidic treatment, and the peak of glucosamine-4-phosphate (4P-GlcN) is detected and measured after chromatography. In the selected conditions of hydrolysis, 4P-GlcN is the prevalent species formed, with GlcN detected for less than 5% in moles. As standard for the analysis, the monomeric unit of MenX polysaccharide, N-acetylglucosamine-4-phosphate (4P-GlcNAc), was used. This method for MenX quantification is highly selective and sensitive, and it constitutes an important analytical tool for the development of a conjugate vaccine against MenX. Copyright © 2013 Elsevier Inc. All rights reserved.

O-linked-N-acetylglucosamine modification of mammalian Notch receptors by an atypical O-GlcNAc transferase Eogt1

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Sakaidani, Yuta [Department of Biochemistry II, Nagoya University Graduate School of Medicine, 65 Tsurumai, Showa-ku, Nagoya 466-0065 (Japan); Ichiyanagi, Naoki [Department of Applied Molecular Biosciences, Nagoya University Graduate School of Bioagricultural Sciences, Furo-cho, Chikusa-ku, Nagoya 464-8601 (Japan); Saito, Chika; Nomura, Tomoko [Department of Biochemistry II, Nagoya University Graduate School of Medicine, 65 Tsurumai, Showa-ku, Nagoya 466-0065 (Japan); Ito, Makiko [Department of Applied Molecular Biosciences, Nagoya University Graduate School of Bioagricultural Sciences, Furo-cho, Chikusa-ku, Nagoya 464-8601 (Japan); Nishio, Yosuke [Department of Biochemistry II, Nagoya University Graduate School of Medicine, 65 Tsurumai, Showa-ku, Nagoya 466-0065 (Japan); Nadano, Daita; Matsuda, Tsukasa [Department of Applied Molecular Biosciences, Nagoya University Graduate School of Bioagricultural Sciences, Furo-cho, Chikusa-ku, Nagoya 464-8601 (Japan); Furukawa, Koichi [Department of Biochemistry II, Nagoya University Graduate School of Medicine, 65 Tsurumai, Showa-ku, Nagoya 466-0065 (Japan); Okajima, Tetsuya, E-mail: tokajima@med.nagoya-u.ac.jp [Department of Biochemistry II, Nagoya University Graduate School of Medicine, 65 Tsurumai, Showa-ku, Nagoya 466-0065 (Japan); Department of Applied Molecular Biosciences, Nagoya University Graduate School of Bioagricultural Sciences, Furo-cho, Chikusa-ku, Nagoya 464-8601 (Japan)

2012-03-02

Highlights: Black-Right-Pointing-Pointer We characterized A130022J15Rik (Eogt1)-a mouse gene homologous to Drosophila Eogt. Black-Right-Pointing-Pointer Eogt1 encodes EGF domain O-GlcNAc transferase. Black-Right-Pointing-Pointer Expression of Eogt1 in Drosophila rescued the cell-adhesion defect in the Eogt mutant. Black-Right-Pointing-Pointer O-GlcNAcylation reaction in the secretory pathway is conserved through evolution. -- Abstract: O-linked-{beta}-N-acetylglucosamine (O-GlcNAc) modification is a unique cytoplasmic and nuclear protein modification that is common in nearly all eukaryotes, including filamentous fungi, plants, and animals. We had recently reported that epidermal growth factor (EGF) repeats of Notch and Dumpy are O-GlcNAcylated by an atypical O-GlcNAc transferase, EOGT, in Drosophila. However, no study has yet shown whether O-GlcNAcylation of extracellular proteins is limited to insects such as Drosophila or whether it occurs in other organisms, including mammals. Here, we report the characterization of A130022J15Rik, a mouse gene homolog of Drosophila Eogt (Eogt 1). Enzymatic analysis revealed that Eogt1 has a substrate specificity similar to that of Drosophila EOGT, wherein the Thr residue located between the fifth and sixth conserved cysteines of the folded EGF-like domains is modified. This observation is supported by the fact that the expression of Eogt1 in Drosophila rescued the cell-adhesion defect caused by Eogt downregulation. In HEK293T cells, Eogt1 expression promoted modification of Notch1 EGF repeats by O-GlcNAc, which was further modified, at least in part, by galactose to generate a novel O-linked-N-acetyllactosamine structure. These results suggest that Eogt1 encodes EGF domain O-GlcNAc transferase and that O-GlcNAcylation reaction in the secretory pathway is a fundamental biochemical process conserved through evolution.

O-linked-N-acetylglucosamine modification of mammalian Notch receptors by an atypical O-GlcNAc transferase Eogt1

International Nuclear Information System (INIS)

Sakaidani, Yuta; Ichiyanagi, Naoki; Saito, Chika; Nomura, Tomoko; Ito, Makiko; Nishio, Yosuke; Nadano, Daita; Matsuda, Tsukasa; Furukawa, Koichi; Okajima, Tetsuya

2012-01-01

Highlights: ► We characterized A130022J15Rik (Eogt1)—a mouse gene homologous to Drosophila Eogt. ► Eogt1 encodes EGF domain O-GlcNAc transferase. ► Expression of Eogt1 in Drosophila rescued the cell-adhesion defect in the Eogt mutant. ► O-GlcNAcylation reaction in the secretory pathway is conserved through evolution. -- Abstract: O-linked-β-N-acetylglucosamine (O-GlcNAc) modification is a unique cytoplasmic and nuclear protein modification that is common in nearly all eukaryotes, including filamentous fungi, plants, and animals. We had recently reported that epidermal growth factor (EGF) repeats of Notch and Dumpy are O-GlcNAcylated by an atypical O-GlcNAc transferase, EOGT, in Drosophila. However, no study has yet shown whether O-GlcNAcylation of extracellular proteins is limited to insects such as Drosophila or whether it occurs in other organisms, including mammals. Here, we report the characterization of A130022J15Rik, a mouse gene homolog of Drosophila Eogt (Eogt 1). Enzymatic analysis revealed that Eogt1 has a substrate specificity similar to that of Drosophila EOGT, wherein the Thr residue located between the fifth and sixth conserved cysteines of the folded EGF-like domains is modified. This observation is supported by the fact that the expression of Eogt1 in Drosophila rescued the cell-adhesion defect caused by Eogt downregulation. In HEK293T cells, Eogt1 expression promoted modification of Notch1 EGF repeats by O-GlcNAc, which was further modified, at least in part, by galactose to generate a novel O-linked-N-acetyllactosamine structure. These results suggest that Eogt1 encodes EGF domain O-GlcNAc transferase and that O-GlcNAcylation reaction in the secretory pathway is a fundamental biochemical process conserved through evolution.

Antinutritive effects of wheat-germ agglutinin and other N-acetylglucosamine-specific lectins.

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Pusztai, A; Ewen, S W; Grant, G; Brown, D S; Stewart, J C; Peumans, W J; Van Damme, E J; Bardocz, S

1993-07-01

Incorporation of N-acetylglucosamine-specific agglutinins from wheat germ (Triticum aestivum; WGA), thorn apple (Datura stramonium) or nettle (Urtica dioica) rhizomes in the diet at the level of 7 g/kg reduced the apparent digestibility and utilization of dietary proteins and the growth of rats, with WGA being the most damaging. As a result of their binding and endocytosis by the epithelial cells of the small intestine, all three lectins were growth factors for the gut and interfered with its metabolism and function to varying degrees. WGA was particularly effective; it induced extensive polyamine-dependent hyperplastic and hypertrophic growth of the small bowel by increasing its content of proteins, RNA and DNA. Furthermore, an appreciable portion of the endocytosed WGA was transported across the gut wall into the systemic circulation, where it was deposited in the walls of the blood and lymphatic vessels. WGA also induced the hypertrophic growth of the pancreas and caused thymus atrophy. Although the transfer of the gene of WGA into crop plants has been advocated to increase their insect resistance, as the presence of this lectin in the diet may harm higher animals at the concentrations required to be effective against most pests, its use in plants as natural insecticide is not without health risks for man.

N-acetylglucosamine affects Cryptococcus neoformans cell-wall composition and melanin architecture.

Science.gov (United States)

Camacho, Emma; Chrissian, Christine; Cordero, Radames J B; Liporagi-Lopes, Livia; Stark, Ruth E; Casadevall, Arturo

2017-11-01

Cryptococcus neoformans is an environmental fungus that belongs to the phylum Basidiomycetes and is a major pathogen in immunocompromised patients. The ability of C. neoformans to produce melanin pigments represents its second most important virulence factor, after the presence of a polysaccharide capsule. Both the capsule and melanin are closely associated with the fungal cell wall, a complex structure that is essential for maintaining cell morphology and viability under conditions of stress. The amino sugar N-acetylglucosamine (GlcNAc) is a key constituent of the cell-wall chitin and is used for both N-linked glycosylation and GPI anchor synthesis. Recent studies have suggested additional roles for GlcNAc as an activator and mediator of cellular signalling in fungal and plant cells. Furthermore, chitin and chitosan polysaccharides interact with melanin pigments in the cell wall and have been found to be essential for melanization. Despite the importance of melanin, its molecular structure remains unresolved; however, we previously obtained critical insights using advanced nuclear magnetic resonance (NMR) and imaging techniques. In this study, we investigated the effect of GlcNAc supplementation on cryptococcal cell-wall composition and melanization. C. neoformans was able to metabolize GlcNAc as a sole source of carbon and nitrogen, indicating a capacity to use a component of a highly abundant polymer in the biospherenutritionally. C. neoformans cells grown with GlcNAc manifested changes in the chitosan cell-wall content, cell-wall thickness and capsule size. Supplementing cultures with isotopically 15 N-labelled GlcNAc demonstrated that the exogenous monomer serves as a building block for chitin/chitosan and is incorporated into the cell wall. The altered chitin-to-chitosan ratio had no negative effects on the mother-daughter cell separation; growth with GlcNAc affected the fungal cell-wall scaffold, resulting in increased melanin deposition and assembly. In

Chemical changes in non-reduced catalysts used for ammonia synthesis

International Nuclear Information System (INIS)

Peev, T.M.; Kyrova, Z.; Bojinova, A.I.

1980-01-01

Samples of non-reduced industrial catalysts CA-1 for ammonia synthesis were studied by using Moessbauer spectroscopy. The conditions of the normal storing of this catalyst were changed. After 6 months it was found that under the influence of moisture and air oxygen a considerable part of the magnetite was converted to α-Fe 2 O 3 , α-FeOOH and γ-FeOOH. (author)

The mitochondrial O-linked N-acetylglucosamine transferase (mOGT) in the diabetic patient could be the initial trigger to develop Alzheimer disease.

Science.gov (United States)

Lozano, Liliana; Lara-Lemus, Roberto; Zenteno, Edgar; Alvarado-Vásquez, Noé

2014-10-01

Diabetes mellitus (DM) is considered a risk factor for the development of Alzheimer disease (AD); however, how DM favors evolution of AD is still insufficiently understood. Hyperglycemia in DM is associated to an increase in mitochondrial reactive oxygen species (ROS) generation, as well as damage of hippocampal cells, reflected by changes in morphological and mitochondrial functionality. Similar mitochondrial damage has been observed when amyloid beta (Aβ) accumulates in the brain of AD patients. In DM, the excess of glucose in the brain induces higher activity of the hexosamine biosynthesis pathway (HBP), it synthesizes UDP-N-acetylglucosamine (UDP-GlcNAc), which is used by O-linked N-acetylglucosamine transferase (OGT) to catalyze O-GlcNAcylation of numerous proteins. Although O-GlcNAcylation plays an important role in maintaining structure and cellular functionality, chronic activity of this pathway has been associated with insulin resistance and hyperglycemia-induced glucose toxicity. Three different forms of OGT are known: nucleocytoplasmic (ncOGT), short (sOGT), and mitochondrial (mOGT). Previous reports showed that overexpression of ncOGT is not toxic to the cell; in contrast, overexpression of mOGT is associated with cellular apoptosis. In this work, we suggest that hyperglycemia in the diabetic patient could induce greater expression and activity of mOGT, modifying the structure and functionality of mitochondria in hippocampal cells, accelerating neuronal damage, and favoring the start of AD. In consequence, mOGT activity could be a key point for AD development in patients with DM. Copyright © 2014 Elsevier Inc. All rights reserved.

A New HPLC-ELSD Method for Simultaneous Determination of N-Acetylglucosamine and N-Acetylgalactosamine in Dairy Foods

Directory of Open Access Journals (Sweden)

Ho Jin Kim

2015-01-01

Full Text Available A rapid high performance liquid chromatographic method with evaporative light scattering detection (HPLC-ELSD, using a carbohydrate column, was developed for simultaneous determination of N-acetylglucosamine (GlcNAc and N-acetylgalactosamine (GalNAc in dairy foods. Sample preparation was performed by precipitation using acetonitrile. The limits of detection were 2.097 mg/L for GlcNAc and 3.247 mg/L for GalNAc. The limits of quantification were 6.043 mg/L for GlcNAc and 9.125 mg/L for GalNAc. Accuracy ranged from 96.4 to 105.7% for GlcNAc and from 97.1 to 104.1% for GalNAc. The precision of the method was <1.7% for GlcNAc and <2.2% for GalNAc. The mean recovery of the method was measured by spiking samples with 30.0–120.0 mg/L GlcNAc or 12.5–50.0 mg/L GalNAc and was found to be 95.1–105.5% for GlcNAc and 99.5–105.9% for GalNAc. The stability test results of standard solutions stored at 4, 20, and 40°C were 96.2–104.7% for GlcNAc and 98.0–106.5% for GalNAc. This study determined GlcNAc and GalNAc in dairy foods using HPLC-ELSD method. This rapid, simultaneous quantitation method might be useful as a mean of convenient quality control of dairy foods.

N-acetylglucosamine increases symptoms and fungal burden in a murine model of oral candidiasis.

Science.gov (United States)

Ishijima, Sanae A; Hayama, Kazumi; Takahashi, Miki; Holmes, Ann R; Cannon, Richard D; Abe, Shigeru

2012-04-01

The amino sugar N-acetylglucosamine (GlcNAc) is an in vitro inducer of the hyphal mode of growth of the opportunistic pathogen Candida albicans. The development of hyphae by C. albicans is considered to contribute to the pathogenesis of mucosal oral candidiasis. GlcNAc is also a commonly used nutritional supplement for the self-treatment of conditions such as arthritis. To date, no study has investigated whether ingestion of GlcNAc has an effect on the in vivo growth of C. albicans or the pathogenesis of a C. albicans infection. Using a murine model of oral candidiasis, we have found that administration of GlcNAc, but not glucose, increased oral symptoms of candidiasis and fungal burden. Groups of mice were given GlcNAc in either water or in a viscous carrier, i.e., 1% methylcellulose. There was a dose-dependent relationship between GlcNAc concentration and the severity of oral symptoms. Mice given the highest dose of GlcNAc, 45.2 mM, also showed a significant increase in fungal burden, and increased histological evidence of infection compared to controls given water alone. We propose that ingestion of GlcNAc, as a nutritional supplement, may have an impact on oral health in people susceptible to oral candidiasis.

Probing the Selectivity and Protein•Protein Interactions of a Non-Reducing Fungal Polyketide Synthase Using Mechanism-Based Crosslinkers

Science.gov (United States)

Bruegger, Joel; Haushalter, Bob; Vagstad, Anna; Shakya, Gaurav; Mih, Nathan; Townsend, Craig A.; Burkart, Michael D.; Tsai, Shiou-Chuan

2013-01-01

SUMMARY Protein•protein interactions, which often involve interactions between an acyl carrier protein (ACP) and its partner enzymes, are important for coordinating polyketide biosynthesis. However, the nature of such interactions is not well understood, especially in the fungal non-reducing polyketide synthases (NR-PKSs) that biosynthesize toxic and pharmaceutically important polyketides. Here, we employ a mechanism-based crosslinker to successfully probe ACP and ketosynthase (KS) domain interactions in NR-PKSs. We found that crosslinking efficiency is closely correlated with the strength of ACP•KS interactions, and that KS demonstrates strong starter unit selectivity. We further identified positively charged surface residues by KS mutagenesis, which mediate key interactions with the negatively-charged ACP surface. Such complementary/matching contact pairs can serve as “adapter surfaces” for future efforts to generate new polyketides using NR-PKSs. PMID:23993461

Analysis of N-acetylaminosugars by CE: a comparative derivatization study.

Science.gov (United States)

Rustighi, Isabella; Campa, Cristiana; Rossi, Marco; Semeraro, Sabrina; Vetere, Amedeo; Gamini, Amelia

2009-08-01

N-linked or O-linked glycans derived from glycoprotein processing carry, an N-acetylglucosamine or an N-acetylgalactosamine respectively, at their reducing termini. The presence of the N-acetylamino group on C-2 of reducing sugar residues has been reported to hamper the derivatization reaction with a chromophore at the anomeric centre. In this paper N-acetyllactosamine, N-acetylglucosamine, N-acetylgalactosamine and several other neutral monosaccharides are coupled to three different dyes (4-aminobenzonitrile, 2-aminopyridine, 2-aminobenzoic acid (2-AA)) by reductive amination and analysed by CE with UV detection. The 2-AA derivatives showed the lowest concentration detection limits, varying approximately in the 2-3 muM range for the saccharides tested including the N-acetamido ones. The possibility to separate and detect with the same sensitivity ten 2-AA-labelled monosaccharides mainly found in mammalian or plant glycoproteins in a single CE run is highlighted. The analysis has been carried out in less than 25 min using the borate-complexation method in CZE mode. The influence of the strength of the acid used as catalyst in the chemical modification of the sugars with 2-AA is also shortly addressed.

Fragment-Specific Fixation Versus Volar Locking Plates in Primarily Nonreducible or Secondarily Redisplaced Distal Radius Fractures: A Randomized Controlled Study.

Science.gov (United States)

Landgren, Marcus; Abramo, Antonio; Geijer, Mats; Kopylov, Philippe; Tägil, Magnus

2017-03-01

To compare the patient-reported, clinical, and radiographic outcome of 2 methods of internal fixation in distal radius fractures. Fifty patients, mean age 56 years (range, 21-69 years) with primarily nonreducible or secondarily redisplaced distal radius fractures were randomized to open reduction internal fixation using volar locking plates (n = 25) or fragment-specific fixation (n = 25). The patients were assessed on grip strength, range of motion, patient-reported outcome (Quick Disabilities of the Arm, Shoulder, and Hand), pain (visual analog scale), health-related quality of life (Short Form-12 [SF-12]), and radiographic evaluation. Grip strength at 12 months was the primary outcome measure. At 12 months, no difference was found in grip strength, which was 90% of the uninjured side in the volar plate group and 87% in the fragment-specific fixation group. No differences were found in range of motion and the median Quick Disabilities of the Arm, Shoulder, and Hand score was 5 in both groups. The overall complication rate was significant, 21% in the volar locking plate group, compared with 52% in the fragment-specific group. In treatment of primarily nonreducible or secondarily redisplaced distal radius fractures, volar locking plates and fragment-specific fixation both achieve good and similar patient-reported outcomes, although more complications were recorded in the fragment-specific group. Therapeutic II. Copyright © 2017 American Society for Surgery of the Hand. Published by Elsevier Inc. All rights reserved.

Glycoengineering of Chinese hamster ovary cells for enhanced erythropoietin N-glycan branching and sialylation

DEFF Research Database (Denmark)

Yin, Bojiao; Gao, Yuan; Chung, Cheng-yu

2015-01-01

Sialic acid, a terminal residue on complex N-glycans, and branching or antennarity can play key roles in both the biological activity and circulatory lifetime of recombinant glycoproteins of therapeutic interest. In order to examine the impact of glycosyltransferase expression on the N-glycosylat......Sialic acid, a terminal residue on complex N-glycans, and branching or antennarity can play key roles in both the biological activity and circulatory lifetime of recombinant glycoproteins of therapeutic interest. In order to examine the impact of glycosyltransferase expression on the N...... increased by 26%. The increase in sialic acid content was further verified by detailed profiling of the N-glycan structures using mass spectra (MS) analysis. In order to enhance antennarity/branching, UDP-N-acetylglucosamine: α-1,3-D-mannoside β1,4-N-acetylglucosaminyltransferase (GnTIV/Mgat4) and UDP...... a mean for enhancing both N-glycan branching complexity and sialylation with opportunities to generate tailored complex N-glycan structures on therapeutic glycoproteins in the future....

Light microscopic detection of sugar residues in glycoconjugates of salivary glands and the pancreas with lectin-horseradish peroxidase conjugates. I. Mouse.

Science.gov (United States)

Schulte, B A; Spicer, S S

1983-12-01

Mouse salivary glands and pancreases were stained with a battery of ten horseradish peroxidase-conjugated lectins. Lectin staining revealed striking differences in the structure of oligosaccharides of stored intracellular secretory glycoproteins and glycoconjugates associated with the surface of epithelial cells lining excretory ducts. The percentage of acinar cells containing terminal alpha-N-acetylgalactosamine residues varied greatly in submandibular glands of 30 male mice, but all submandibular acinar cells contained oligosaccharides with terminal sialic acid and penultimate beta-galactose residues. The last named dimer was abundant in secretory glycoprotein of all mucous acinar cells in murine sublingual glands and an additional 20-50% of these cells in all glands contained terminal N-acetylglucosamine residues. In contrast, terminal alpha-N-acetylgalactosamine was abundant in sublingual serous demilune secretions. Serous acinar cells in the exorbital lacrimal gland, posterior lingual gland, parotid gland and pancreas exhibited a staining pattern unique to each organ. In contrast, the apical cytoplasm and surface of striated duct epithelial cells in the submandibular, sublingual, parotid and exorbital lacrimal gland stained similarly. A comparison of staining with conjugated lectins reported biochemically to have very similar carbohydrate binding specificity has revealed some remarkable differences in their reactivity, suggesting different binding specificity for the same terminal sugars having different glycosidic linkages or with different penultimate sugar residues.

O-GlcNAc-specific antibody CTD110.6 cross-reacts with N-GlcNAc2-modified proteins induced under glucose deprivation.

Directory of Open Access Journals (Sweden)

Takahiro Isono

Full Text Available Modification of serine and threonine residues in proteins by O-linked β-N-acetylglucosamine (O-GlcNAc glycosylation is a feature of many cellular responses to the nutritional state and to stress. O-GlcNAc modification is reversibly regulated by O-linked β-N-acetylglucosamine transferase (OGT and β-D-N-acetylglucosaminase (O-GlcNAcase. O-GlcNAc modification of proteins is dependent on the concentration of uridine 5'-diphospho-N-acetylglucosamine (UDP-GlcNAc, which is a substrate of OGT and is synthesized via the hexosamine biosynthetic pathway. Immunoblot analysis using the O-GlcNAc-specific antibody CTD110.6 has indicated that glucose deprivation increases protein O-GlcNAcylation in some cancer cells. The mechanism of this paradoxical phenomenon has remained unclear. Here we show that the increased glycosylation induced by glucose deprivation and detected by CTD110.6 antibodies is actually modification by N-GlcNAc(2, rather than by O-GlcNAc. We found that this induced glycosylation was not regulated by OGT and O-GlcNAcase, unlike typical O-GlcNAcylation, and it was inhibited by treatment with tunicamycin, an N-glycosylation inhibitor. Proteomics analysis showed that proteins modified by this induced glycosylation were N-GlcNAc(2-modified glycoproteins. Furthermore, CTD110.6 antibodies reacted with N-GlcNAc(2-modified glycoproteins produced by a yeast strain with a ts-mutant of ALG1 that could not add a mannose residue to dolichol-PP-GlcNAc(2. Our results demonstrated that N-GlcNAc(2-modified glycoproteins were induced under glucose deprivation and that they cross-reacted with the O-GlcNAc-specific antibody CTD110.6. We therefore propose that the glycosylation status of proteins previously classified as O-GlcNAc-modified proteins according to their reactivity with CTD110.6 antibodies must be re-examined. We also suggest that the repression of mature N-linked glycoproteins due to increased levels of N-GlcNAc(2-modified proteins is a newly

Structures of the Peptidoglycan N-Acetylglucosamine Deacetylase Bc1974 and Its Complexes with Zinc Metalloenzyme Inhibitors.

Science.gov (United States)

Giastas, Petros; Andreou, Athena; Papakyriakou, Athanasios; Koutsioulis, Dimitris; Balomenou, Stavroula; Tzartos, Socrates J; Bouriotis, Vassilis; Eliopoulos, Elias E

2018-02-06

The cell wall peptidoglycan is recognized as a primary target of the innate immune system, and usually its disintegration results in bacterial lysis. Bacillus cereus, a close relative of the highly virulent Bacillus anthracis, contains 10 polysaccharide deacetylases. Among these, the peptidoglycan N-acetylglucosamine deacetylase Bc1974 is the highest homologue to the Bacillus anthracis Ba1977 that is required for full virulence and is involved in resistance to the host's lysozyme. These metalloenzymes belong to the carbohydrate esterase family 4 (CE4) and are attractive targets for the development of new anti-infective agents. Herein we report the first X-ray crystal structures of the NodB domain of Bc1974, the conserved catalytic core of CE4s, in the unliganded form and in complex with four known metalloenzyme inhibitors and two amino acid hydroxamates that target the active site metal. These structures revealed the presence of two conformational states of a catalytic loop known as motif-4 (MT4), which were not observed previously for peptidoglycan deacetylases, but were recently shown in the structure of a Vibrio clolerae chitin deacetylase. By employing molecular docking of a substrate model, we describe a catalytic mechanism that probably involves initial binding of the substrate in a receptive, more open state of MT4 and optimal catalytic activity in the closed state of MT4, consistent with the previous observations. The ligand-bound structures presented here, in addition to the five Bc1974 inhibitors identified, provide a valuable basis for the design of antibacterial agents that target the peptidoglycan deacetylase Ba1977.

Elucidating the crucial role of poly N-acetylglucosamine from Staphylococcus aureus in cellular adhesion and pathogenesis.

Science.gov (United States)

Lin, Mei Hui; Shu, Jwu Ching; Lin, Li Ping; Chong, Kowit Yu; Cheng, Ya Wen; Du, Jia Fu; Liu, Shih-Tung

2015-01-01

Staphylococcus aureus is an important pathogen that forms biofilms on the surfaces of medical implants. Biofilm formation by S. aureus is associated with the production of poly N-acetylglucosamine (PNAG), also referred to as polysaccharide intercellular adhesin (PIA), which mediates bacterial adhesion, leading to the accumulation of bacteria on solid surfaces. This study shows that the ability of S. aureus SA113 to adhere to nasal epithelial cells is reduced after the deletion of the ica operon, which contains genes encoding PIA/PNAG synthesis. However, this ability is restored after a plasmid carrying the entire ica operon is transformed into the mutant strain, S. aureus SA113Δica, showing that the synthesis of PIA/PNAG is important for adhesion to epithelial cells. Additionally, S. carnosus TM300, which does not produce PIA/PNAG, forms a biofilm and adheres to epithelial cells after the bacteria are transformed with a PIA/PNAG-expressing plasmid, pTXicaADBC. The adhesion of S. carnosus TM300 to epithelial cells is also demonstrated by adding purified exopolysaccharide (EPS), which contains PIA/PNAG, to the bacteria. In addition, using a mouse model, we find that the abscess lesions and bacterial burden in lung tissues is higher in mice infected with S. aureus SA113 than in those infected with the mutant strain, S. aureus SA113Δica. The results indicate that PIA/PNAG promotes the adhesion of S. aureus to human nasal epithelial cells and lung infections in a mouse model. This study elucidates a mechanism that is important to the pathogenesis of S. aureus infections.

A Putative O-Linked β-N-Acetylglucosamine Transferase Is Essential for Hormogonium Development and Motility in the Filamentous Cyanobacterium Nostoc punctiforme.

Science.gov (United States)

Khayatan, Behzad; Bains, Divleen K; Cheng, Monica H; Cho, Ye Won; Huynh, Jessica; Kim, Rachelle; Omoruyi, Osagie H; Pantoja, Adriana P; Park, Jun Sang; Peng, Julia K; Splitt, Samantha D; Tian, Mason Y; Risser, Douglas D

2017-05-01

Most species of filamentous cyanobacteria are capable of gliding motility, likely via a conserved type IV pilus-like system that may also secrete a motility-associated polysaccharide. In a subset of these organisms, motility is achieved only after the transient differentiation of hormogonia, which are specialized filaments that enter a nongrowth state dedicated to motility. Despite the fundamental importance of hormogonia to the life cycles of many filamentous cyanobacteria, the molecular regulation of hormogonium development is largely undefined. To systematically identify genes essential for hormogonium development and motility in the model heterocyst-forming filamentous cyanobacterium Nostoc punctiforme , a forward genetic screen was employed. The first gene identified using this screen, designated ogtA , encodes a putative O-linked β- N -acetylglucosamine transferase (OGT). The deletion of ogtA abolished motility, while ectopic expression of ogtA induced hormogonium development even under hormogonium-repressing conditions. Transcription of ogtA is rapidly upregulated (1 h) following hormogonium induction, and an OgtA-GFPuv fusion protein localized to the cytoplasm. In developing hormogonia, accumulation of PilA but not HmpD is dependent on ogtA Reverse transcription-quantitative PCR (RT-qPCR) analysis indicated equivalent levels of pilA transcript in the wild-type and Δ ogtA mutant strains, while a reporter construct consisting of the intergenic region in the 5' direction of pilA fused to gfp produced lower levels of fluorescence in the Δ ogtA mutant strain than in the wild type. The production of hormogonium polysaccharide in the Δ ogtA mutant strain is reduced compared to that in the wild type but comparable to that in a pilA deletion strain. Collectively, these results imply that O -GlcNAc protein modification regulates the accumulation of PilA via a posttranscriptional mechanism in developing hormogonia. IMPORTANCE Filamentous cyanobacteria are among

Checkpoint kinase 1-induced phosphorylation of O-linked β-N-acetylglucosamine transferase regulates the intermediate filament network during cytokinesis.

Science.gov (United States)

Li, Zhe; Li, Xueyan; Nai, Shanshan; Geng, Qizhi; Liao, Ji; Xu, Xingzhi; Li, Jing

2017-12-01

Checkpoint kinase 1 (Chk1) is a kinase instrumental for orchestrating DNA replication, DNA damage checkpoints, the spindle assembly checkpoint, and cytokinesis. Despite Chk1's pivotal role in multiple cellular processes, many of its substrates remain elusive. Here, we identified O- linked β- N -acetylglucosamine ( O -GlcNAc)-transferase (OGT) as one of Chk1's substrates. We found that Chk1 interacts with and phosphorylates OGT at Ser-20, which not only stabilizes OGT, but also is required for cytokinesis. Phospho-specific antibodies of OGT-pSer-20 exhibited specific signals at the midbody of the cell, consistent with midbody localization of OGT as reported previously. Moreover, phospho-deficient OGT (S20A) cells attenuated cellular O -GlcNAcylation levels and also reduced phosphorylation of Ser-71 in the cytoskeletal protein vimentin, a modification critical for severing vimentin filament during cytokinesis. Consequently, elongated vimentin bridges were observed in cells depleted of OGT via an si OGT- based approach. Lastly, expression of plasmids resistant to si OGT efficiently rescued the vimentin bridge phenotype, but the OGT-S20A rescue plasmids did not. Our results suggest a Chk1-OGT-vimentin pathway that regulates the intermediate filament network during cytokinesis. © 2017 by The American Society for Biochemistry and Molecular Biology, Inc.

Elucidating the crucial role of poly N-acetylglucosamine from Staphylococcus aureus in cellular adhesion and pathogenesis.

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Mei Hui Lin

Full Text Available Staphylococcus aureus is an important pathogen that forms biofilms on the surfaces of medical implants. Biofilm formation by S. aureus is associated with the production of poly N-acetylglucosamine (PNAG, also referred to as polysaccharide intercellular adhesin (PIA, which mediates bacterial adhesion, leading to the accumulation of bacteria on solid surfaces. This study shows that the ability of S. aureus SA113 to adhere to nasal epithelial cells is reduced after the deletion of the ica operon, which contains genes encoding PIA/PNAG synthesis. However, this ability is restored after a plasmid carrying the entire ica operon is transformed into the mutant strain, S. aureus SA113Δica, showing that the synthesis of PIA/PNAG is important for adhesion to epithelial cells. Additionally, S. carnosus TM300, which does not produce PIA/PNAG, forms a biofilm and adheres to epithelial cells after the bacteria are transformed with a PIA/PNAG-expressing plasmid, pTXicaADBC. The adhesion of S. carnosus TM300 to epithelial cells is also demonstrated by adding purified exopolysaccharide (EPS, which contains PIA/PNAG, to the bacteria. In addition, using a mouse model, we find that the abscess lesions and bacterial burden in lung tissues is higher in mice infected with S. aureus SA113 than in those infected with the mutant strain, S. aureus SA113Δica. The results indicate that PIA/PNAG promotes the adhesion of S. aureus to human nasal epithelial cells and lung infections in a mouse model. This study elucidates a mechanism that is important to the pathogenesis of S. aureus infections.

Relative availability of crop residue-N in rice cultivation

International Nuclear Information System (INIS)

Sirwando, H; Abdullah, N.

1988-01-01

The use of plant residues for soil amendment will reduce the use of chemical fertilizers. The experiment to study the uptake of N from various plant residues by rice crop. Three kinds of plant residue of soybean labelled with 15-N. Four levels of urea (0, 15, 30, 40 kg N/ha) were applied to aluvial soil from Pusakanegara. The factorial experiment was conducted in fully randomize design, with plant residues as the main treatment, and rate of urea as substreatment. The results obtained from this experiment showed that plant dry weight, N content of grain, straw, and the whole plant of Atomita I rice treated with soybean strow seens to be higher than those treated with the straw of rice or corn. (author). 6 refs.; 7 tabs

Poly-N-acetylglucosamine production in Staphylococcus aureus is essential for virulence in murine models of systemic infection.

Science.gov (United States)

Kropec, Andrea; Maira-Litran, Tomas; Jefferson, Kimberly K; Grout, Martha; Cramton, Sarah E; Götz, Friedrich; Goldmann, Donald A; Pier, Gerald B

2005-10-01

The contribution of the Staphylococcus aureus surface polysaccharide poly-N-acetylglucosamine (PNAG) to virulence was evaluated in three mouse models of systemic infection: bacteremia, renal abscess formation, and lethality following high-dose intraperitoneal (i.p.) infection. Deletion of the intercellular adhesin (ica) locus that encodes the biosynthetic enzymes for PNAG production in S. aureus strains Mn8, Newman, and NCTC 10833 resulted in mutant strains with significantly reduced abilities to maintain bacterial levels in blood following intravenous or i.p. injection, to spread systemically to the kidneys following i.p. injection, or to induce a moribund/lethal state following i.p. infection. In the bacteremia model, neither growth phase nor growth medium used to prepare the S. aureus inoculum affected the conclusion that PNAG production was needed for full virulence. As the SarA regulatory protein has been shown to affect ica transcription, PNAG synthesis, and biofilm formation, we also evaluated S. aureus strains Mn8 and 10833 deleted for the sarA gene in the renal infection model. A decrease in PNAG production was seen in sarA mutants using immunoblots of cell surface extracts but was insufficient to reduce the virulence of sarA-deleted strains in this model. S. aureus strains deleted for the ica genes were much more susceptible to antibody-independent opsonic killing involving human peripheral blood leukocytes and rabbit complement. Thus, PNAG confers on S. aureus resistance to killing mediated by these innate host immune mediators. Overall, PNAG production by S. aureus appears to be a critical virulence factor as assessed in murine models of systemic infection.

Nitrogen Released From Organic Residues Using 15N

International Nuclear Information System (INIS)

Galal, Y.G.M.; Gadalla, A.M.; Abdel Aziz, H.A.; Abdel Salam, A.A.; El-Degwy, S.M.A.

2008-01-01

Incubation technique was followed under laboratory condition to evaluate and determine the rate of organic residues decomposition as well as N released in media. Rice straw, soybean straw, and leuceana cutting residue were used. These materials were incubated on virgin sandy soil up to 90 days intervals. Cups with mixture of sand and organic residues were inoculated with fungi, bacteria and mixture of them. Un inoculated treatment was also included. Results showed that N released from the different organic materials was significant at 30 days of incubation. It seems that presence of Azotobacter was associated with enhanced demand on soluble N at this stage. Superiority of leucaena over the other two sources of rice straw and soybean straw occurred particularly during the 15 to 30.day period. In greenhouse experiment, the results indicated that N derived from organic materials was high and easily released from compost as mediated materials comparing to leucaena as undigested raw materials. In the same time, barley had more benefits from organic residues than lupine crop

Utilization by the isolated perfused rat liver of N-acetyl-D-(1-/sup 14/C)galactosamine and N-brace/sup 3/H)-acetyl-D-galactosamine for the biosynthesis of glycoproteins

Energy Technology Data Exchange (ETDEWEB)

MacNicoll, A D; Wusteman, F S; Powell, G M; Curtis, C G [University Coll., Cardiff (UK)

1978-08-15

The isolated perfused rat liver system has been used to monitor the utilization of N-(/sup 3/H)acetyl-D-galactosamine and N-acetyl-D-(1-/sup 14/C)galactosamine for the biosynthesis of radiolabeled glycoproteins, which are subsequently secreted into the plasma. Both radiolabels appear in a number of different glycoproteins, predominantly as sialic acid and N-acetylglucosamine. The ratio of labelled sialic acid to labelled N-acetylglucosamine varies for different glycoproteins, but the bulk of N-acetyl-D-galactosamine is incorporated without deacetylation.

Stabilization and plant uptake of N from 15N-labelled pea residue 16.5 years after incorporation in soil

DEFF Research Database (Denmark)

Laberge, G.; Ambus, P.; Hauggaard-Nielsen, H.

2006-01-01

The decline of N from N-15-labelled mature pea residues was followed in unplanted soil over 16.5 yr. Eight years after residue incorporation, 24% of the residue N-15 input was still present in the soil and, after 16.5 yr, 16% of the residue N-15 input remained. A double exponential model......-amended soils were obtaining 1.7% of their N from residue N. This is, to our knowledge, the longest study on decay of N in soils from N-15-labelled crop residues. The current study thus provides a unique data set for our empirical understanding of N-dynamics in agricultural systems, which is a prerequisite...

Induction of PNAd and N-acetylglucosamine 6-O-sulfotransferases 1 and 2 in mouse collagen-induced arthritis

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Rosen Steven D

2006-06-01

Full Text Available Abstract Background Leukocyte recruitment across blood vessels is fundamental to immune surveillance and inflammation. Lymphocyte homing to peripheral lymph nodes is mediated by the adhesion molecule, L-selectin, which binds to sulfated carbohydrate ligands on high endothelial venules (HEV. These glycoprotein ligands are collectively known as peripheral node addressin (PNAd, as defined by the function-blocking monoclonal antibody known as MECA-79. The sulfation of these ligands depends on the action of two HEV-expressed N-acetylglucosamine 6-O-sulfotransferases: GlcNAc6ST-2 and to a lesser degree GlcNAc6ST-1. Induction of PNAd has also been shown to occur in a number of human inflammatory diseases including rheumatoid arthritis (RA. Results In order to identify an animal model suitable for investigating the role of PNAd in chronic inflammation, we examined the expression of PNAd as well as GlcNAc6ST-1 and -2 in collagen-induced arthritis in mice. Here we show that PNAd is expressed in the vasculature of arthritic synovium in mice immunized with collagen but not in the normal synovium of control animals. This de novo expression of PNAd correlates strongly with induction of transcripts for both GlcNAc6ST-1 and GlcNAc6ST-2, as well as the expression of GlcNAc6ST-2 protein. Conclusion Our results demonstrate that PNAd and the sulfotransferases GlcNAc6ST-1 and 2 are induced in mouse collagen-induced arthritis and suggest that PNAd antagonists or inhibitors of the enzymes may have therapeutic benefit in this widely-used mouse model of RA.

Biotransformación del pelo residual de curtiembres

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Ruth Viviana Numpaque

2016-12-01

Full Text Available La industria de curtiembres genera una alta carga contaminante representada por residuos líquidos, sólidos y gaseosos. Entre los residuos sólidos, el pelo residual es vertido directamente al río Bogotá y/o en rellenos sanitarios, desencadenando serios conflictos de orden ambiental, social y económico. El objetivo de esta investigación fue evaluar la capacidad de los microorganismos del EM y Agroplux en la transformación del pelo residual en compost. Se evaluaron tres tratamientos con pelo residual y materiales orgánicos de plaza en diferentes porcentajes y dos controles, utilizando el diseño completamente al azar, con tres repeticiones. Durante el compostaje se determinaron las variables temperatura, formación de agregados, pH y conductividad eléctrica. El desarrollo de la temperatura ocurrió en ciclos que concordaron con los volteos y re-inoculaciones. En el tercer ciclo el mayor incremento de temperatura fue obtenido en los tres tratamientos, cuando ya se había agotado la mayor parte de los residuos orgánicos. La formación de agregados indicó que el proceso se llevó a efecto principalmente en el tratamiento con 20% de pelo residual más 80% de residuos orgánicos. Además de su color oscuro y la ausencia de olor y fragmentos, el compost producido mediante dicho tratamiento mostró la conductividad eléctrica más baja y un pH casi neutro. Se concluye que los microorganismos del EM y Agroplux tienen capacidad para transformar el pelo residual en compost y por lo tanto representan una alternativa viable para la continuación del funcionamiento de la industria de curtiembres en Villapinzón (Cundinamarca y en otras regiones de Colombia.

[Effect of reduced N application on soil N residue and N loss in maize-soybean relay strip intercropping system].

Science.gov (United States)

Liu, Xiao-Ming; Yong, Tai-Wen; Liu, Wen-Yu; Su, Ben-Ying; Song, Chun; Yang, Feng; Wang, Xiao-Chun; Yang, Wen-Yu

2014-08-01

A field experiment was conducted in 2012, including three planting pattern (maize-soybean relay strip intercropping, mono-cultured maize and soybean) and three nitrogen application level [0 kg N x hm(-2), 180 kg N x hm(-2) (reduced N) and 240 kg N x hm(-2) (normal N)]. Fields were assigned to different treatments in a randomized block design with three replicates. The objective of this work was to analyze the effects of planting patterns and nitrogen application rates on plant N uptake, soil N residue and N loss. After fertilization applications, NH4(+)-N and NO3(-)-N levels increased in the soil of intercropped maize but decreased in the soil of intercropped soybean. Compared with mono-crops, the soil N residue and loss of intercropped soybean were reduced, while those of intercropped maize were increased and decreased, respectively. With the reduced rate of N application, N residue rate, N loss rate and ammonia volatilization loss rate of the maize-soybean intercropping relay strip system were decreased by 17.7%, 21.5% and 0.4% compared to mono-cultured maize, but increased by 2.0%, 19.8% and 0.1% compared to mono-cultured soybean, respectively. Likewise, the reduced N application resulted in reductions in N residue, N loss, and the N loss via ammonia volatilization in the maize-soybean relay strip intercropping system compared with the conventional rate of N application adopted by local farmers, and the N residue rate, N loss rate and ammonia volatilization loss rate reduced by 12.0%, 15.4% and 1.2%, respectively.

Histochemistry of lectin-binding sites in Halicryptus spinulosus (Priapulida).

Science.gov (United States)

Busch, A; Schumacher, U; Storch, V

2001-02-01

Priapulida represent one of the phylogenetically oldest multicellular animal groups. In multicellular animals (Metazoa) cell-to-cell and cell-to-matrix interactions are often mediated by carbohydrate residues of glycoconjugates. To analyze the carbohydrate composition of a phylogenetically old species, lectin histochemistry was employed on 5 specimens of the priapulid Halicryptus spinulosus. Many lectins bound to the chitin-containing cuticle, including those specific for carbohydrates other than N-acetylglucosamine, the principle building block of chitin. The connective tissue of the animals contained both N-acetylglucosamine and N-acetylgalactosamine. Mannose residues were widely distributed with the exception of the cuticle, but complex type carbohydrates were not present in the entire animal. Sialic acid residues were only detected in the cuticle and brush border of the intestinal epithelium, while fucose was limited to the cuticle. Thus, the lectin-binding pattern indicated that sugars typical for the linking region of both N- and O-glycoproteins in mammals are also present in H. spinulosus. Carbohydrate residues that are typical for the complex type of N-linked glycans in vertebrates are not present as are carbohydrate residues typical for the termination of O-linked carbohydrate chains. Hence, a truncated form of both N- and O-linked glycosylation is present in H. spinulosus indicating that more complex patterns of glycosylation developed later during evolution.

O-linked N-acetylglucosamine transferase enhances secretory clusterin expression via liver X receptors and sterol response element binding protein regulation in cervical cancer.

Science.gov (United States)

Kim, Min Jun; Choi, Mee Young; Lee, Dong Hoon; Roh, Gu Seob; Kim, Hyun Joon; Kang, Sang Soo; Cho, Gyeong Jae; Kim, Yoon Sook; Choi, Wan Sung

2018-01-12

O-linked N-acetylglucosamine transferase (OGT) expression is increased in various cancer types, indicating the potential importance of O-GlcNAcylation in tumorigenesis. Secretory clusterin (sCLU) is involved in cancer cell proliferation and drug resistance, and recently, liver X receptors (LXRs) and sterol response element binding protein-1 (SREBP-1) were reported to regulate sCLU transcription. Here, we found that sCLU is significantly increased in cervical cancer cell lines, which have higher expression levels of O-GlcNAc and OGT than keratinocytes. OGT knockdown decreased expression of LXRs, SREBP-1 and sCLU through hypo-O-GlcNAcylation of LXRs. Additionally, treatment with Thiamet G, O-GlcNAcase OGA inhibitor, increased expression of O-GlcNAcylation and sCLU, and high glucose increased levels of LXRs, SREBP-1 and sCLU in HeLa cells. Moreover, OGT knockdown induced G 0 /G 1 phase cell cycle arrest and late apoptosis in cisplatin-treated HeLa cells, and decreased viability compared to OGT intact HeLa cells. Taken together, these findings suggest that OGT, O-GlcNAcylated LXRs, and SREBP-1 increase sCLU expression in cervical cancer cells, which contributes to drug resistance.

Influence of culture medium supplementation of tobacco NT1 cell suspension cultures on the N-glycosylation of human secreted alkaline phosphatase.

Science.gov (United States)

Becerra-Arteaga, Alejandro; Shuler, Michael L

2007-08-15

We report for the first time that culture conditions, specifically culture medium supplementation with nucleotide-sugar precursors, can alter significantly the N-linked glycosylation of a recombinant protein in plant cell culture. Human secreted alkaline phosphatase produced in tobacco NT1 cell suspension cultures was used as a model system. Plant cell cultures were supplemented with ammonia (30 mM), galactose (1 mM) and glucosamine (10 mM) to improve the extent of N-linked glycosylation. The highest levels of cell density and active extracellular SEAP in supplemented cultures were on average 260 g/L and 0.21 U/mL, respectively, compared to 340 g/L and 0.4 U/mL in unsupplemented cultures. The glycosylation profile of SEAP produced in supplemented cultures was determined via electrospray ionization mass spectrometry with precursor ion scanning and compared to that of SEAP produced in unsupplemented cultures. In supplemented and unsupplemented cultures, two biantennary complex-type structures terminated with one or two N-acetylglucosamines and one paucimannosidic glycan structure comprised about 85% of the SEAP glycan pool. These three structures contained plant-specific xylose and fucose residues and their relative abundances were affected by each supplement. High mannose structures (6-9 mannose residues) accounted for the remaining 15% glycans in all cases. The highest proportion (approximately 66%) of a single complex-type biantennary glycan structure terminated in both antennae by N- acetylglucosamine was obtained with glucosamine supplementation versus only 6% in unsupplemented medium. This structure is amenable for in vitro modification to yield a more human-like glycan and could serve as a route to plant cell culture produced therapeutic glycoproteins. (c) 2007 Wiley Periodicals, Inc.

Evolved osmotolerant Escherichia coli mutants frequently exhibit defective N-acetylglucosamine catabolism and point mutations in cell shape-regulating protein MreB.

Science.gov (United States)

Winkler, James D; Garcia, Carlos; Olson, Michelle; Callaway, Emily; Kao, Katy C

2014-06-01

Biocatalyst robustness toward stresses imposed during fermentation is important for efficient bio-based production. Osmotic stress, imposed by high osmolyte concentrations or dense populations, can significantly impact growth and productivity. In order to better understand the osmotic stress tolerance phenotype, we evolved sexual (capable of in situ DNA exchange) and asexual Escherichia coli strains under sodium chloride (NaCl) stress. All isolates had significantly improved growth under selection and could grow in up to 0.80 M (47 g/liter) NaCl, a concentration that completely inhibits the growth of the unevolved parental strains. Whole genome resequencing revealed frequent mutations in genes controlling N-acetylglucosamine catabolism (nagC, nagA), cell shape (mrdA, mreB), osmoprotectant uptake (proV), and motility (fimA). Possible epistatic interactions between nagC, nagA, fimA, and proV deletions were also detected when reconstructed as defined mutations. Biofilm formation under osmotic stress was found to be decreased in most mutant isolates, coupled with perturbations in indole secretion. Transcriptional analysis also revealed significant changes in ompACGL porin expression and increased transcription of sulfonate uptake systems in the evolved mutants. These findings expand our current knowledge of the osmotic stress phenotype and will be useful for the rational engineering of osmotic tolerance into industrial strains in the future. Copyright © 2014, American Society for Microbiology. All Rights Reserved.

Rewiring the Glucose Transportation and Central Metabolic Pathways for Overproduction of N-Acetylglucosamine in Bacillus subtilis.

Science.gov (United States)

Gu, Yang; Deng, Jieying; Liu, Yanfeng; Li, Jianghua; Shin, Hyun-Dong; Du, Guocheng; Chen, Jian; Liu, Long

2017-10-01

N-acetylglucosamine (GlcNAc) is an important amino sugar extensively used in the healthcare field. In a previous study, the recombinant Bacillus subtilis strain BSGN6-P xylA -glmS-pP43NMK-GNA1 (BN0-GNA1) had been constructed for microbial production of GlcNAc by pathway design and modular optimization. Here, the production of GlcNAc is further improved by rewiring both the glucose transportation and central metabolic pathways. First, the phosphotransferase system (PTS) is blocked by deletion of three genes, yyzE (encoding the PTS system transporter subunit IIA YyzE), ypqE (encoding the PTS system transporter subunit IIA YpqE), and ptsG (encoding the PTS system glucose-specific EIICBA component), resulting in 47.6% increase in the GlcNAc titer (from 6.5 ± 0.25 to 9.6 ± 0.16 g L -1 ) in shake flasks. Then, reinforcement of the expression of the glcP and glcK genes and optimization of glucose facilitator proteins are performed to promote glucose import and phosphorylation. Next, the competitive pathways for GlcNAc synthesis, namely glycolysis, peptidoglycan synthesis pathway, pentose phosphate pathway, and tricarboxylic acid cycle, are repressed by initiation codon-optimization strategies, and the GlcNAc titer in shake flasks is improved from 10.8 ± 0.25 to 13.2 ± 0.31 g L -1 . Finally, the GlcNAc titer is further increased to 42.1 ± 1.1 g L -1 in a 3-L fed-batch bioreactor, which is 1.72-fold that of the original strain, BN0-GNA1. This study shows considerably enhanced GlcNAc production, and the metabolic engineering strategy described here will be useful for engineering other prokaryotic microorganisms for the production of GlcNAc and related molecules. © 2017 WILEY-VCH Verlag GmbH & Co. KGaA, Weinheim.

Nitrogen immobilization and mineralization during initial decomposition of 15N-labelled pea and barley residues

DEFF Research Database (Denmark)

Jensen, E.S.

1997-01-01

The immobilization and mineralization of N following plant residue incorporation were studied in a sandy loam soil using N-15-labelled field pea (Pisum sativum L.) and spring barley (Hordeum vulgare L.) straw. Both crop residues caused a net immobilization of soil-derived inorganic N during...... the complete incubation period of 84 days. The maximum rate of N immobilization was found to 12 and 18 mg soil-derived N g(-1) added C after incorporation of pea and barley residues, respectively. After 7 days of incubation, 21% of the pea and 17% of the barley residue N were assimilated by the soil microbial...... the decomposition of the barley residue. The net mineralization of residue-derived N was 2% in the barley and 22% in the pea residue treatment after 84 days of incubation. The results demonstrated that even if crop residues have a relative low C/N ratio (15), transient immobilization of soil N in the microbial...

Toxin ζ Reversible Induces Dormancy and Reduces the UDP-N-Acetylglucosamine Pool as One of the Protective Responses to Cope with Stress

Directory of Open Access Journals (Sweden)

Mariangela Tabone

2014-09-01

Full Text Available Toxins of the ζ/PezT family, found in the genome of major human pathogens, phosphorylate the peptidoglycan precursor uridine diphosphate-N-acetylglucosamine (UNAG leading to unreactive UNAG-3P. Transient over-expression of a PezT variant impairs cell wall biosynthesis and triggers autolysis in Escherichia coli. Conversely, physiological levels of ζ reversibly induce dormancy produce a sub-fraction of membrane-compromised cells, and a minor subpopulation of Bacillus subtilis cells become tolerant of toxin action. We report here that purified ζ is a strong UNAG-dependent ATPase, being GTP a lower competitor. In vitro, ζ toxin phosphorylates a fraction of UNAG. In vivo, ζ-mediated inactivation of UNAG by phosphorylation does not deplete the active UNAG pool, because expression of the toxin enhances the efficacy of genuine cell wall inhibitors (fosfomycin, vancomycin or ampicillin. Transient ζ expression together with fosfomycin treatment halt cell proliferation, but ε2 antitoxin expression facilitates the exit of ζ-induced dormancy, suggesting that there is sufficient UNAG for growth. We propose that ζ induces diverse cellular responses to cope with stress, being the reduction of the UNAG pool one among them. If the action of ζ is not inhibited, e.g., by de novo ε2 antitoxin synthesis, the toxin markedly enhances the efficacy of antimicrobial treatment without massive autolysis in Firmicutes.

Residual N effects from livestock manure inputs to soils

DEFF Research Database (Denmark)

Schröder, Jaap; Bechini, Luca; Bittman, Shabtai

Organic inputs including livestock manures provide nitrogen (N) to crops beyond the year of their application. This so-called residual N effect should be taken into account when making decisions on N rates for individual fields, but also when interpreting N response trials in preparation...

Dynamic O-linked N-acetylglucosamine modification of proteins affects stress responses and survival of mesothelial cells exposed to peritoneal dialysis fluids.

Science.gov (United States)

Herzog, Rebecca; Bender, Thorsten O; Vychytil, Andreas; Bialas, Katarzyna; Aufricht, Christoph; Kratochwill, Klaus

2014-12-01

The ability of cells to respond and survive stressful conditions is determined, in part, by the attachment of O-linked N-acetylglucosamine (O-GlcNAc) to proteins (O-GlcNAcylation), a post-translational modification dependent on glucose and glutamine. This study investigates the role of dynamic O-GlcNAcylation of mesothelial cell proteins in cell survival during exposure to glucose-based peritoneal dialysis fluid (PDF). Immortalized human mesothelial cells and primary mesothelial cells, cultured from human omentum or clinical effluent of PD patients, were assessed for O-GlcNAcylation under normal conditions or after exposure to PDF. The dynamic status of O-GlcNAcylation and effects on cellular survival were investigated by chemical modulation with 6-diazo-5-oxo-L-norleucine (DON) to decrease or O-(2-acetamido-2-deoxy-D-glucopyranosylidene)amino N-phenyl carbamate (PUGNAc) to increase O-GlcNAc levels. Viability was decreased by reducing O-GlcNAc levels by DON, which also led to suppressed expression of the cytoprotective heat shock protein 72. In contrast, increasing O-GlcNAc levels by PUGNAc or alanyl-glutamine led to significantly improved cell survival paralleled by higher heat shock protein 72 levels during PDF treatment. Addition of alanyl-glutamine increased O-GlcNAcylation and partly counteracted its inhibition by DON, also leading to improved cell survival. Immunofluorescent analysis of clinical samples showed that the O-GlcNAc signal primarily originates from mesothelial cells. In conclusion, this study identified O-GlcNAcylation in mesothelial cells as a potentially important molecular mechanism after exposure to PDF. Modulating O-GlcNAc levels by clinically feasible interventions might evolve as a novel therapeutic target for the preservation of peritoneal membrane integrity in PD. Copyright © 2014 by the American Society of Nephrology.

Residual N effects from livestock manure inputs to soils

NARCIS (Netherlands)

Schroder, J.J.; Bechini, L.; Bittman, S.; Brito, M.P.; Delin, S.; Lalor, S.T.J.; Morvan, T.; Chambers, B.J.; Sakrabani, R.; Sørensen, P.B.

2013-01-01

Organic inputs including livestock manures provide nitrogen (N) to crops beyond the year of their application. This so-called residual N effect should be taken into account when making decisions on N rates for individual fields, but also when interpreting N response trials in preparation of

Measuring O-GlcNAc cleavage by OGA and cell lysates on a peptide microarray

NARCIS (Netherlands)

Sharif, Suhela; Shi, Jie; Bourakba, Mostafa; Ruijtenbeek, Rob; Pieters, Roland J.

2017-01-01

O-GlcNAcylation is a post-translational modification resulting from the addition of an N-acetylglucosamine moiety to the hydroxyl groups of serine and threonine residues of nuclear and cytoplasmic proteins. In addition, O-GlcNAcylated proteins can be phosphorylated, which suggests the possibility

Short-term residual N unaffected by forbs in grass-clover mixtures

DEFF Research Database (Denmark)

Dhamala, Nawa Raj; Rasmussen, Jim; Cong, Wenfeng

2017-01-01

We determined the effect on residual nitrogen (N) of including forbs (chicory, ribwort plantain and caraway) in perennial ryegrass-red clover mixtures. Although soil N inputs during the grassland phase differed markedly between mixtures, in a pot experiment we found no differences...... in the potentially mineralizable N of the soil or in the dry matter production and N content of the spring barley test crop. The fertilizer value of the grassland mixtures corresponded to 10 g N/m2, irrespective of forb inclusion. Thus, the inclusion of nonlegume forbs did not negatively affect short-term residual N...

Lignin biochemistry and soil N determine crop residue decomposition and soil priming

Science.gov (United States)

Cropping history can affect soil properties, including available N, but little is known about the interactive effects of residue biochemistry, temperature and cropping history on residue decomposition. A laboratory incubation examined the role of residue biochemistry and temperature on the decomposi...

Kinetics of N-Glycan Release from Human Immunoglobulin G (IgG) by PNGase F: All Glycans Are Not Created Equal.

Science.gov (United States)

Huang, Yining; Orlando, Ron

2017-12-01

The biologic activity of IgG molecules is modulated by its crystallizable fragment N-glycosylation, and thus, the analysis of IgG glycosylation is critical. A standard approach to analyze glycosylation of IgGs involves the release of the N-glycans by the enzyme peptide N-glycosidase F, which cleaves the linkage between the asparagine residue and innermost N-acetylglucosamine (GlcNAc) of all N-glycans except those containing a 3-linked fucose attached to the reducing terminal GlcNAc residue. The importance of obtaining complete glycan release for accurate quantitation led us to investigate the kinetics of this de-glycosylation reaction for IgG glycopeptides and to determine the effect of glycan structure and amino acid sequence on the rate of glycan release from glycopeptides of IgGs. This study revealed that the slight differences in amino acid sequences did not lead to a statistically different deglycosylation rate. However, statistically significant differences in the deglycosylation rate constants were observed between glycopeptides differing only in glycan structure ( i.e. , nonfucosylated, fucosylated, bisecting-GlcNAc, sialylated, etc .). For example, a single sialic acid residue was found to decrease the rate by a factor of 3. Similar reductions in rate were associated with the presence of a bisecting-GlcNAc. We predict the differences in release kinetics can lead to significant quantitative variations of the glycosylation study of IgGs.

Utilization of residual nitrogen (15N) from cover crop and urea by corn

International Nuclear Information System (INIS)

Silva, Edson Cabral da; Muraoka, Takashi; Trivelin, Paulo Cesar Ocheuze; Buzetti, Salatier; Veloso, Marcos Emanuel da Costa

2006-01-01

The majority of N from mineral fertilizers and cover crops is usually not used by the very next corn crop, but can be absorbed by follow-up crops. The objective of this study was to evaluate the use of residual nitrogen from urea, sunnhemp (Crotalaria juncea) and millet (Pennisetum americanum) labeled with 15 N, applied to no-tillage corn in the previous growing season, in a Red Latosol of the Cerrado. The study was conducted in an experimental farm of the Sao Paulo State University (UNESP), Ilha Solteira, in Selviria county (MS), Brazil, in different areas. The experiment had a randomized complete block design, with 15 treatments and four replications. Treatments were applied to corn crop in the 2001/02 and 2003/04 growing seasons. They were distributed in a 3 x 5 factorial layout, representing the combination of three cover crops: sunnhemp, millet and spontaneous vegetation (fallow) and five N rates (as urea): 0, 30, 80, 130, and 180 kg ha-1 of N. After corn harvest, the two areas were followed in the dry season and were followed by corn crop in the 2002/03 (experiment 1) and 2003/04 (experiment 2) growing seasons, using the same fertilizer rate on all plots to distinguish the residual effect of N sources. The average use of residual N from the millet and sunnhemp residues (above-ground part) by corn crop was less than 3.5 and 3 %, respectively, of the initial amount. The corn uptake of residual N from urea increased in a quadratic manner in experiment 1 and linearly in experiment Two as a response to the applied N rates, and the recover was below 3 %. The cover crop type did not affect the use of residual N of urea by corn, and vice-versa. (author)

The Dynamic of the N-Turnover of Plant Residues in The soil using nuclear technique

International Nuclear Information System (INIS)

Ismail, M.M.A.

2004-01-01

Laboratory and greenhouse experiments were carried out to study the dynamic of the N-turnover of leguminous and non-leguminous plant residues in sandy soil using N-15 . tracer technique. Also, the availability of N from labelled or unlabelled ammonium sulfate was included. using 15 N-technique, data obtained generally indicated that 15 N-mineralization percent for soybean (narrow C/N ratio) increased with time, being more effective and superior over wheat residue-N (wide C/N ratio) on the net 15 N-mineralization through out the time of incubation (10 weeks).Data obtained generally indicated that the N-mineralization significantly decreased due to the application of soybean, wheat, wheat + soybean and / or ammonium sulfate along with the time of vegetative growth stage until harvesting period under with or without wheat stands . In general at any period of growth plant stages of wheat, the amount of microbial biomass-N under wheat residue and/or ammonium sulfate treated and untreated soil significantly decreased rapidly from an initial of vegetative stage until harvesting time. the positive effect of plant residues on the amount of biomass-N was arranged as follows : soybean>wheat + soybean> wheat residues

Gamow-Jordan vectors and non-reducible density operators from higher-order S-matrix poles

International Nuclear Information System (INIS)

Bohm, A.; Loewe, M.; Maxson, S.; Patuleanu, P.; Puentmann, C.; Gadella, M.

1997-01-01

In analogy to Gamow vectors that are obtained from first-order resonance poles of the S-matrix, one can also define higher-order Gamow vectors which are derived from higher-order poles of the S-matrix. An S-matrix pole of r-th order at z R =E R -iΓ/2 leads to r generalized eigenvectors of order k=0,1,hor-ellipsis,r-1, which are also Jordan vectors of degree (k+1) with generalized eigenvalue (E R -iΓ/2). The Gamow-Jordan vectors are elements of a generalized complex eigenvector expansion, whose form suggests the definition of a state operator (density matrix) for the microphysical decaying state of this higher-order pole. This microphysical state is a mixture of non-reducible components. In spite of the fact that the k-th order Gamow-Jordan vectors has the polynomial time-dependence which one always associates with higher-order poles, the microphysical state obeys a purely exponential decay law. copyright 1997 American Institute of Physics

Moderate mammalian target of rapamycin inhibition induces autophagy in HTR8/SVneo cells via O-linked β-N-acetylglucosamine signaling.

Science.gov (United States)

Zhang, Qiuxia; Na, Quan; Song, Weiwei

2017-10-01

Autophagy, a highly regulated process with a dual role (pro-survival or pro-death), has been implicated in adverse pregnancy outcomes. The aim of this study was to explore the mechanism whereby mammalian target of rapamycin (mTOR) signaling regulates autophagy by modulating protein O-GlcNAcylation in human trophoblasts. HTR8/SVneo cells were incubated in serum-free medium for different time intervals or treated with varying doses of Torin1. Protein expression and cell apoptosis were detected by immunoblotting and flow cytometry, respectively. Short-term serum starvation or slight suppression of mTOR signaling promoted autophagy and decreased apoptosis in HTR8/SVneo cells. Conversely, prolonged serum starvation or excessive inhibition of mTOR reduced autophagy and enhanced cell apoptosis. Both serum starvation and mTOR signaling suppression reduced protein O-GlcNAcylation. Upregulation and downregulation of O-linked β-N-acetylglucosamine (O-GlcNAc) levels attenuated and augmented autophagy, respectively. Moderate mTOR inhibition-induced autophagy was blocked by upregulation of protein O-GlcNAcylation. Furthermore, immunoprecipitation studies revealed that Beclin1 and synaptosome associated protein 29 (SNAP29) could be O-GlcNAcylated, and that slight mTOR inhibition resulted in decreased O-GlcNAc modification of Beclin1 and SNAP29. Notably, we observed an inverse correlation between phosphorylation (Ser15) and O-GlcNAcylation of Beclin1. mTOR signaling inhibition played dual roles in regulating autophagy and apoptosis in HTR8/SVneo cells. Moderate mTOR suppression might induce autophagy via modulating O-GlcNAcylation of Beclin1 and SNAP29. Moreover, the negative interplay between Beclin1 O-GlcNAcylation and phosphorylation (Ser15) may be involved in autophagy regulation by mTOR signaling. © 2017 Japan Society of Obstetrics and Gynecology.

Study of residual gas adsorption on GaN nanowire arrays photocathode

Energy Technology Data Exchange (ETDEWEB)

Xia, Sihao; Liu, Lei, E-mail: liu1133_cn@sina.com.cn; Diao, Yu; Kong, Yike

2017-05-01

Highlights: • H{sub 2}O is more easily to absorb on the nanowire surface. • The work function increase after residual gas adsorption. • Bandgaps of the nanowire increase slightly. • Absorption coefficient is reduced and moves to higher energy side. - Abstract: In order to find out the influences of residual gas on GaN nanowire arrays photocathode, the optoelectronic properties of adsorption system are calculated on the basis of first principles. Results suggest that the residual gas adsorption will increase the work function and introduce a dipole moment with a direction from the nanowire to the adsorbates. The surface structures are changed and electrons transfer from nanowire to gas molecule. The bandgaps are enhanced after adsorption. Besides, the peak of absorption coefficients is reduced and moves to higher energy side. It is discovered that residual gas will drastically degrade the characteristics and lifetime of GaN nanowire arrays photocathode.

Evidence for denitrification as main source of N2O emission from residue-amended soil

DEFF Research Database (Denmark)

Li, Xiaoxi; Sørensen, Peter; Olesen, Jørgen Eivind

2016-01-01

-leguminous species (ryegrass). Plant material was placed in a discrete layer surrounded by soil in which the nitrate View the MathML source pool was enriched with 15N to distinguish N2O derived from denitrification and nitrification. Net N mineralisation from leguminous catch crops was significant (30–48 mg N kg−1....... Emission of N2O occurred at all moisture levels, but was higher at 50 and 60% WFPS than at 40% in soil with leguminous residues. The 15N enrichment of N2O indicated that denitrification was the dominant source independent of moisture level and residue type. We conclude that catch crop residues...... will stimulate N2O emissions via denitrification over a wide range of soil moisture conditions, but that emission levels may depend significantly on residue quality and soil moisture....

Nitrogen mineralization from selected 15N-labelled crop residues and humus as affected by inorganic nitrogen

International Nuclear Information System (INIS)

Santos, J.A.

1987-01-01

The use of cover crops or crop residues as a source of N to succeeding crops has become a matter of increasing importance for economic and environmental reason. Greenhouse and field studies were conducted to determine the N contribution of four 15 N labelled crop residues, rye (Secale cereale L.), wheat (Triticum aestivum L.), crimson clover (Trifolium encarnatum L.), and hairy vetch (Vicia sativa L.), to successive crops and to evaluate the effect of different organic (ON) and inorganic N (IN) combinations on mineralization of the above residues. Total 15 N recovery from the residues ranged from 51% to 85% and 4% to 74% for the greenhouse and field studies, respectively

Nitrous oxide and N-leaching losses from agricultural soil: Influence of crop residue particle size, quality and placement

DEFF Research Database (Denmark)

Ambus, P.; Jensen, E.S.; Robertson, G.P.

2001-01-01

protection of the crop residue material against microbial attack. Leaching of N tended to be reduced about 40 % with barley and 20 % with pea, but the numbers were not significantly different from residue-free soil, which leached 4.7-4.9 g N m(-2). When wheat and alfalfa residues were mixed into the soil N2O...... emissions increased 6.5 and 1.6 times, respectively, compared with residue placed in a layer. Wheat residue in a layer evolved 3.4-times less N2O than alfalfa in a layer, whereas when mixed the two residue types evolved similar amounts of N2O. This difference was probably due to N-limitations in localised...

Turnover of grain legume N rhizodeposits and effect of rhizodeposition on the turnover of crop residues

DEFF Research Database (Denmark)

Mayer, J.; Buegger, F.; Jensen, E.S.

2004-01-01

The turnover of N derived from rhizodeposition of faba bean (Vicia faba L.), pea (Pisum sativum L.) and white lupin (Lupinus albus L.) and the effects of the rhizodeposition on the subsequent C and N turnover of its crop residues were investigated in an incubation experiment (168 days, 15 degrees....... In the experiment the turnover of C and N was compared in soils with and without previous growth of three legumes and with and without incorporation of crop residues. After 168 days, 21% (lupin), 26% (faba bean) and 27% (pea) of rhizodeposition N was mineralised in the treatments without crop residues. A smaller...... amount of 15-17% was present as microbial biomass and between 30 and 55% of mineralised rhizodeposition N was present as microbial residue pool, which consists of microbial exoenzymes, mucous substances and dead microbial biomass. The effect of rhizodeposition on the C and N turnover of crop residues...

Hotspots of soil N2O emission enhanced through water absorption by plant residue

Energy Technology Data Exchange (ETDEWEB)

Kravchenko, A.N.; Toosi, E.R.; Guber, A.K.; Ostrom, N.E.; Yu, J.; Azeem, K.; Rivers, M.L.; Robertson , G.P. (UAF Pakistan); (UC); (Hubei); (MSU)

2017-06-05

N2O is a highly potent greenhouse gas and arable soils represent its major anthropogenic source. Field-scale assessments and predictions of soil N2O emission remain uncertain and imprecise due to the episodic and microscale nature of microbial N2O production, most of which occurs within very small discrete soil volumes. Such hotspots of N2O production are often associated with decomposing plant residue. Here we quantify physical and hydrological soil characteristics that lead to strikingly accelerated N2O emissions in plant residue-induced hotspots. Results reveal a mechanism for microscale N2O emissions: water absorption by plant residue that creates unique micro-environmental conditions, markedly different from those of the bulk soil. Moisture levels within plant residue exceeded those of bulk soil by 4–10-fold and led to accelerated N2O production via microbial denitrification. The presence of large (Ø >35 μm) pores was a prerequisite for maximized hotspot N2O production and for subsequent diffusion to the atmosphere. Understanding and modelling hotspot microscale physical and hydrologic characteristics is a promising route to predict N2O emissions and thus to develop effective mitigation strategies and estimate global fluxes in a changing environment.

Formal modeling and analysis of the hexosamine biosynthetic pathway: role of O-linked N-acetylglucosamine transferase in oncogenesis and cancer progression

Directory of Open Access Journals (Sweden)

Muhammad Tariq Saeed

2016-09-01

Full Text Available The alteration of glucose metabolism, through increased uptake of glucose and glutamine addiction, is essential to cancer cell growth and invasion. Increased flux of glucose through the Hexosamine Biosynthetic Pathway (HBP drives increased cellular O-GlcNAcylation (hyper-O-GlcNAcylation and contributes to cancer progression by regulating key oncogenes. However, the association between hyper-O-GlcNAcylation and activation of these oncogenes remains poorly characterized. Here, we implement a qualitative modeling framework to analyze the role of the Biological Regulatory Network in HBP activation and its potential effects on key oncogenes. Experimental observations are encoded in a temporal language format and model checking is applied to infer the model parameters and qualitative model construction. Using this model, we discover step-wise genetic alterations that promote cancer development and invasion due to an increase in glycolytic flux, and reveal critical trajectories involved in cancer progression. We compute delay constraints to reveal important associations between the production and degradation rates of proteins. O-linked N-acetylglucosamine transferase (OGT, an enzyme used for addition of O-GlcNAc during O-GlcNAcylation, is identified as a key regulator to promote oncogenesis in a feedback mechanism through the stabilization of c-Myc. Silencing of the OGT and c-Myc loop decreases glycolytic flux and leads to programmed cell death. Results of network analyses also identify a significant cycle that highlights the role of p53-Mdm2 circuit oscillations in cancer recovery and homeostasis. Together, our findings suggest that the OGT and c-Myc feedback loop is critical in tumor progression, and targeting these mediators may provide a mechanism-based therapeutic approach to regulate hyper-O-GlcNAcylation in human cancer.

Estimación de la seguridad residual en estructuras de hormigón con problemas patológicos

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Morán Cabré, F.

1994-12-01

Full Text Available The problems encountered in the survey, the diagnosis and the residual safety assessment of damaged reinforced concrete structures are schematically presented, together with the techniques and methods most commonly used for their solution.

Se presentan, de forma esquemática, los problemas que se plantean en la inspección, en el diagnóstico y en la estimación de la seguridad residual de estructuras de hormigón que presentan problemas patológicos, así como las técnicas y los métodos más comunes para su resolución.

Effect of crop sequence and crop residues on soil C, soil N and yield of maize

International Nuclear Information System (INIS)

Shafi, M.; Bakht, J.; Attaullah; Khan, M.A.

2010-01-01

Improved management of nitrogen (N) in low N soils is critical for increased soil productivity and crop sustainability. The objective of the present study was to evaluate the effects of residues incorporation, residues retention on soil surface as mulch, fertilizer N and legumes in crop rotation on soil fertility and yield of maize (Zea may L.). Fertilizer N was applied to maize at the rate of 160 kg ha/sup -1/, and to wheat at the rate of 120 kg ha/sup -1/ or no fertilizer N application. Crop rotation with the sequence of maize after wheat (Triticum aestivum L.), maize after lentil (Lens culinaris Medic) or wheat after mash bean (Vigna mungo L.) arranged in a split plot design was followed. Post-harvest incorporation of crop residues and residues retention on soil surface as mulch had significantly (p=0.05) affected grain and stover yield during 2004 and 2005. Two years average data revealed that grain yield was increased by 3.31 and 6.72% due to mulch and residues incorporation. Similarly, stover yield was also enhanced by 5.39 and 10.27% due to the same treatment respectively. Mulch and residues incorporation also improved stover N uptake by 2.23 and 6.58%, respectively. Total soil N and organic matter was non significantly (p=0.05) increased by 5.63 and 2.38% due to mulch and 4.13, 7.75% because of crop residues incorporation in the soil. Maize grain and stover yield responded significantly (p=0.05) to the previous legume (lentil) crop when compared with the previous cereal crop (wheat). The treatment of lentil - maize(+N), on the average, increased grain yield of maize by 15.35%, stover yield by 16.84%, total soil N by 10.31% and organic matter by 10.17%. Similarly, fertilizer N applied to the previous wheat showed carry over effect on grain yield (6.82%) and stover yield (11.37%) of the following maize crop. The present study suggested that retention of residues on soil surface as mulch, incorporation of residues in soil and legume (lentil - maize) rotation

A residual life prediction model based on the generalized σ -N curved surface

Directory of Open Access Journals (Sweden)

Zongwen AN

2016-06-01

Full Text Available In order to investigate change rule of the residual life of structure under random repeated load, firstly, starting from the statistic meaning of random repeated load, the joint probability density function of maximum stress and minimum stress is derived based on the characteristics of order statistic (maximum order statistic and minimum order statistic; then, based on the equation of generalized σ -N curved surface, considering the influence of load cycles number on fatigue life, a relationship among minimum stress, maximum stress and residual life, that is the σmin(n- σmax(n-Nr(n curved surface model, is established; finally, the validity of the proposed model is demonstrated by a practical case. The result shows that the proposed model can reflect the influence of maximum stress and minimum stress on residual life of structure under random repeated load, which can provide a theoretical basis for life prediction and reliability assessment of structure.

Obstetric outcomes in reduced and non-reduced twin pregnancies. A single hospital experience

Directory of Open Access Journals (Sweden)

UmmKulthoum E. AlShelaly

2015-09-01

Full Text Available Objectives: To compare pregnancy outcomes between high-order multiple pregnancies resulting from assisted reproductive technology (ART reduced to twins and non-reduced pregnancies, and to evaluate indications for using ART. Methods: This is a descriptive retrospective review of women with high-order multiple pregnancies reduced to twin carried out at the Department of Obstetrics & Gynecology, King Faisal Specialist Hospital & Research Center, Riyadh, Saudi Arabia between December 2010 and December 2013. The control group consisted of subjects with twin pregnancies who received their fertility treatment at the same hospital during the same period. Results: One hundred and twelve women were included in this study. Of women reaching fetal viability, significantly more women delivered before the thirtieth week in the study group (50% versus 12%, p<0.004. Miscarriage/delivery prior to fetal viability, chorioamnionitis, and preterm premature rupture of membranes were statistically higher in the study group. A total of 83% of the miscarriages in the study group were in women carrying 4 or more fetuses initially, and 50% of women in the study group were multiparous with no clear indication for fertility treatment. Conclusion: Although fetal reduction is a safe procedure, it is associated with complications. Primary prevention of high-order multiple pregnancy is recommended.

OGT (O-GlcNAc Transferase) Selectively Modifies Multiple Residues Unique to Lamin A.

Science.gov (United States)

Simon, Dan N; Wriston, Amanda; Fan, Qiong; Shabanowitz, Jeffrey; Florwick, Alyssa; Dharmaraj, Tejas; Peterson, Sherket B; Gruenbaum, Yosef; Carlson, Cathrine R; Grønning-Wang, Line M; Hunt, Donald F; Wilson, Katherine L

2018-05-17

The LMNA gene encodes lamins A and C with key roles in nuclear structure, signaling, gene regulation, and genome integrity. Mutations in LMNA cause over 12 diseases ('laminopathies'). Lamins A and C are identical for their first 566 residues. However, they form separate filaments in vivo, with apparently distinct roles. We report that lamin A is β- O -linked N -acetylglucosamine- (O -GlcNAc)-modified in human hepatoma (Huh7) cells and in mouse liver. In vitro assays with purified O -GlcNAc transferase (OGT) enzyme showed robust O -GlcNAcylation of recombinant mature lamin A tails (residues 385⁻646), with no detectable modification of lamin B1, lamin C, or 'progerin' (Δ50) tails. Using mass spectrometry, we identified 11 O -GlcNAc sites in a 'sweet spot' unique to lamin A, with up to seven sugars per peptide. Most sites were unpredicted by current algorithms. Double-mutant (S612A/T643A) lamin A tails were still robustly O -GlcNAc-modified at seven sites. By contrast, O -GlcNAcylation was undetectable on tails bearing deletion Δ50, which causes Hutchinson⁻Gilford progeria syndrome, and greatly reduced by deletion Δ35. We conclude that residues deleted in progeria are required for substrate recognition and/or modification by OGT in vitro. Interestingly, deletion Δ35, which does not remove the majority of identified O -GlcNAc sites, does remove potential OGT-association motifs (lamin A residues 622⁻625 and 639⁻645) homologous to that in mouse Tet1. These biochemical results are significant because they identify a novel molecular pathway that may profoundly influence lamin A function. The hypothesis that lamin A is selectively regulated by OGT warrants future testing in vivo, along with two predictions: genetic variants may contribute to disease by perturbing OGT-dependent regulation, and nutrient or other stresses might cause OGT to misregulate wildtype lamin A.

Differential expression and localization of glycosidic residues in in vitro- and in vivo-matured cumulus-oocyte complexes in equine and porcine species.

Science.gov (United States)

Accogli, Gianluca; Douet, Cécile; Ambruosi, Barbara; Martino, Nicola Antonio; Uranio, Manuel Filioli; Deleuze, Stefan; Dell'Aquila, Maria Elena; Desantis, Salvatore; Goudet, Ghylène

2014-12-01

Glycoprotein oligosaccharides play major roles during reproduction, yet their function in gamete interactions is not fully elucidated. Identification and comparison of the glycan pattern in cumulus-oocyte complexes (COCs) from species with different efficiencies of in vitro spermatozoa penetration through the zona pellucida (ZP) could help clarify how oligosaccharides affect gamete interactions. We compared the expression and localization of 12 glycosidic residues in equine and porcine in vitro-matured (IVM) and preovulatory COCs by means of lectin histochemistry. The COCs glycan pattern differed between animals and COC source (IVM versus preovulatory). Among the 12 carbohydrate residues investigated, the IVM COCs from these two species shared: (a) sialo- and βN-acetylgalactosamine (GalNAc)-terminating glycans in the ZP; (b) sialylated and fucosylated glycans in cumulus cells; and (c) GalNAc and N-acetylglucosamine (GlcNAc) glycans in the ooplasm. Differences in the preovulatory COCs of the two species included: (a) sialoglycans and GlcNAc terminating glycans in the equine ZP versus terminal GalNAc and internal GlcNAc in the porcine ZP; (b) terminal galactosides in equine cumulus cells versus terminal GlcNAc and fucose in porcine cohorts; and (c) fucose in the mare ooplasm versus lactosamine and internal GlcNAc in porcine oocyte cytoplasm. Furthermore, equine and porcine cumulus cells and oocytes contributed differently to the synthesis of ZP glycoproteins. These results could be attributed to the different in vitro fertilization efficiencies between these two divergent, large-animal models. © 2014 Wiley Periodicals, Inc.

Utilização do nitrogênio (15N residual de coberturas de solo e da uréia pela cultura do milho Utilization of residual nitrogen (15N from cover crop and urea by corn

Directory of Open Access Journals (Sweden)

Edson Cabral da Silva

2006-12-01

Full Text Available Geralmente, grande parte do N de fertilizantes minerais e de plantas de cobertura de solo não é aproveitada pelo milho no cultivo imediato à aplicação, o qual pode ser absorvido pelas culturas cultivadas subseqüentemente. O objetivo deste trabalho foi avaliar o aproveitamento pelo milho do N residual da uréia, da crotalária (Crotalaria juncea e do milheto (Pennisetum americanum marcados com 15N, aplicados ao milho cultivado em sistema plantio direto, no ano agrícola anterior, num Latossolo Vermelho distroférrico no Cerrado. O estudo foi desenvolvido na fazenda experimental da Faculdade de Engenharia de Ilha Solteira-UNESP, Selvíria (MS, em áreas distintas. O delineamento experimental foi de blocos ao acaso com 15 tratamentos e quatro repetições, aplicados ao milho em 2001/02 e 2002/03. Os tratamentos foram dispostos em esquema fatorial 3 x 5, compreendendo a combinação de três coberturas de solo: crotalária juncea, milheto e vegetação espontânea (pousio, e cinco doses de N-uréia: 0, 30, 80, 130 e 180 kg ha-1. Após a colheita do milho, as duas áreas permaneceram em pousio nas entressafras e, em seguida, cultivadas novamente com milho, safras 2002/03 (experimento 1 e 2003/04 (experimento 2, utilizando adubação similar em todas as parcelas, para distinguir o efeito do N residual. O aproveitamento médio do N residual da parte aérea do milheto e da crotalária pelo milho foi inferior a 3,5 e 3 %, respectivamente, da quantidade inicial. A quantidade de N residual da uréia absorvida pelo milho aumentou de forma quadrática, no experimento 1, e linear, no experimento 2, em relação à dose de N aplicada, sendo o aproveitamento desta inferior a 3 %. As coberturas de solo não influenciaram o aproveitamento pelo milho do N residual da uréia, e vice-versa.The majority of N from mineral fertilizers and cover crops is usually not used by the very next corn crop, but can be absorbed by follow-up crops. The objective of this

Residual stress, mechanical and microstructure properties of multilayer Mo{sub 2}N/CrN coating produced by R.F Magnetron discharge

Energy Technology Data Exchange (ETDEWEB)

Bouaouina, B., E-mail: b.bouaouina@gmail.com [Department of physic, research unite UR-MPE, Boumerdes University 35000 (Algeria); Besnard, A. [Arts et Metiers ParisTech—LaBoMaP, 71250 Cluny (France); Abaidia, S.E. [Department of physic, research unite UR-MPE, Boumerdes University 35000 (Algeria); Haid, F. [CDTA, Plasma discharges Group, Baba hassen, Algers (Algeria)

2017-02-15

Highlights: • Depositing of crystallized molybdenum nitride and chromium nitride multilayer at room temperature. • Correlation between stress measurement and the shift of the XRD diffraction peak (1 1 1) of Mo{sub 2}N. • Studied the effect of the bi-layer thickness on the mechanical properties. - Abstract: We have investigated the effect of the period thickness of the multilayer Mo{sub 2}N/CrN deposited on Si substrate produced by reactive magnetron sputtering. Mo{sub 2}N presents a face centered cubic structure and CrN an orthorhombic one. The residual stress of the coatings was determined by the measurement of the substrate curvature. The microstructure of the multilayer was investigated from the X-ray diffraction and scanning electron microscopy (cross section images). The residual stresses resulting from the deposition of the different bi-layer thickness were measured and correlated to the structural properties of the coating as well as the nanoindentation analysis of the coating. The stresses are compressive and tensile for the individual Mo{sub 2}N and CrN layer respectively. The result shows that an increase of the multilayer coatings Mo{sub 2}N/CrN thicknesses induce an increase of the hardness and the elastic modulus, in the other hand the tensile stress increases. The shift of the XRD diffraction peak (1 1 1) of Mo{sub 2}N at high angle which means the reduction of the residual stress is in good agreement with the residual stresses measurements.

Depth-resolved X-ray residual stress analysis in PVD (Ti, Cr) N hard coatings

CERN Document Server

Genzel, C

2003-01-01

Physical vapour deposition (PVD) of thin hard coatings on TiN basis is usually performed at rather low temperatures (T sub D < 500 C) far from thermal equilibrium, which leads to high intrinsic residual stresses in the growing film. In contrast to the extrinsic thermal residual stresses which can easily be estimated from the difference of the coefficients of thermal expansion between the substrate and the coating, a theoretical prediction of the intrinsic residual stresses is difficult, because their amount as well as their distribution within the film depend in a very complex way on the deposition kinetics. By the example of strongly fibre-textured PVD (Ti, Cr)N coatings which have been prepared under defined variation of the deposition parameters in order to adjust the residual stress distribution within the coatings, the paper compares different X-ray diffraction techniques with respect to their applicability for detecting residual stresses which are non-uniform over the coating thickness. (orig.)

Residual N effect of long-term applications of cattle slurry using winter wheat as test crop

DEFF Research Database (Denmark)

Suarez, Alfonso; Thomsen, Ingrid Kaag; Rasmussen, Jim

2018-01-01

) as reference treatments. In the test years, the customary nutrient treatments were withheld and each plot divided into six subplots randomly allocated increasing rates of mineral fertilizer N (0–250 kg N ha−1). The winter wheat yielded more in the first test year due to crop rotational effects and more benign...... climatic conditions, substantiating that more test years are needed when estimating residual N effects. The residual value of N added previously with NPK was negligible. In the first year, grain yields at N optimum were similar for NPK and SLU, but the amount of fertilizer N needed to reach optimum yield...... in cattle slurry (50, 100 and 150 kg total-N ha−1 termed ½, 1 and 1½ SLU), we estimated the residual N value over two consecutive growth periods (2014/2015 and 2015/2016). We used winter wheat as test crop and soils with a history of mineral fertilizers only (1 PK (no N)) and 1 NPK (100 kg N ha−1...

Neutral N-glycan patterns of the gastropods Limax maximus, Cepaea hortensis, Planorbarius corneus, Arianta arbustorum and Achatina fulica.

Science.gov (United States)

Gutternigg, Martin; Bürgmayr, Sabine; Pöltl, Gerald; Rudolf, Judith; Staudacher, Erika

2007-11-01

The N-glycosylation potentials of Limax maximus, Cepaea hortensis, Planorbarius corneus, Arianta arbustorum and Achatina fulica were analysed by investigation of the N-glycan structures of the skin and viscera glycoproteins by a combination of HPLC and mass-spectrometry methods. It is one of the first steps to enlarge the knowledge on the glycosylation abilities of gastropods, which may help to establish new cell culture systems, to uncover new means for pest control for some species, and to identify carbohydrate-epitopes which may be relevant for immune response. All snails analysed contained mainly oligomannosidic and small paucimannosidic structures, often terminated with 3-O-methylated mannoses. The truncated structures carried modifications by beta1-2-linked xylose to the beta-mannose residue, and/or an alpha-fucosylation, mainly alpha1,6-linked to the innermost N-acetylglucosaminyl residue of the core. Many of these structures were missing the terminal N-acetylglucosamine, which has been shown to be a prerequisite for processing to complex N-glycans in the Golgi. In some species (Planorbarius corneus and Achatina fulica) traces of large structures, terminated by 3-O-methylated galactoses and carrying xylose and/or fucose residues, were also detected. In Planorbarius viscera low amounts of terminal alpha1-2-fucosylation were determined. Combining these results, gastropods seem to be capable to produce all kinds of structures ranging from those typical in mammals through to structures similar to those found in plants, insects or nematodes. The detailed knowledge of this very complex glycosylation system of the gastropods will be a valuable tool to understand the principle rules of glycosylation in all organisms.

Protein O-linked ß-N-acetylglucosamine: A novel effector of cardiomyocyte metabolism and function

Science.gov (United States)

Darley-Usmar, Victor M.; Ball, Lauren E.; Chatham, John C.

2014-01-01

The post-translational modification of serine and threonine residues of nuclear and cytoplasmic proteins by the O-linked attachment of the monosaccharide ß-N-acetyl-glucosamine (O-GlcNAc) is emerging as an important mechanism for the regulation of numerous biological processes critical for normal cell function. Active synthesis of O-GlcNAc is essential for cell viability and acute activation of pathways resulting in increased protein O-GlcNAc levels improves the tolerance of cells to a wide range of stress stimuli. Conversely sustained increases in O-GlcNAc levels have been implicated in numerous chronic disease states, especially as a pathogenic contributor to diabetic complications. There has been increasing interest in the role of O-GlcNAc in the heart and vascular system and acute activation of O-GlcNAc levels have been shown to reduce ischemia/reperfusion injury attenuate vascular injury responses as well mediate some of the detrimental effects of diabetes and hypertension on cardiac and vascular function. Here we provide an overview of our current understanding of pathways regulating protein O-GlcNAcylation, summarize the different methodologies for identifying and characterizing O-GlcNAcylated proteins and subsequently focus on two emerging areas: 1) the role of O-GlcNAc as a potential regulator of cardiac metabolism and 2) the cross talk between O-GlcNAc and reactive oxygen species. PMID:21878340

Lead speciation in 0.1N HCl-extracted residue of analog of Pb-contaminated soil

International Nuclear Information System (INIS)

Wei Yuling; Yang, Y.-W.; Lee, J.-F.

2005-01-01

The heavy metal in-taken by plants from contaminated soils is usually assessed by extraction with 0.1N HCl. This study characterized the chemical form of lead in the solid residue of 0.1N HCl-extracted Pb-contaminated kaolin. The results indicate that most lead in the 0.1N HCl-extracted residue of the Pb(NO 3 ) 2 -contaminated kaolin dried at 105 deg C is mainly in form of PbCl 2 . For other lead-containing kaolin sample heated at 900 deg C, the XAS analysis also shows that majority of the lead compound was converted into PbCl 2 precipitate that remained in the solid residue during the 0.1N HCl extraction. Because PbCl 2 is only slightly soluble in dilute acids or water, it is suggested that using 0.1N HCl liquid as an extracting reagent to represent the heavy metal uptake by plants might actually underestimate the uptake

A Novel Murine Candidiasis Model with Severe Colonization in the Stomach Induced by N-acetylglucosamine-treatment and Its Scoring System Based on Local Characteristic Stomach Symptoms.

Science.gov (United States)

Ishijima, Sanae A; Abe, Shigeru

2015-01-01

We developed a novel murine candidiasis model of the gastrointestinal tract using N-acetylglucosamine ( GlcNAc ) as a tool to aggravate symptoms. Forty-eight hours after intragastrically inoculating Candida albicans cells to immunosuppressed and GlcNAc-treated mice, vigorously accumulating patchy whitish plaques were observed on their inner stomach surface. Candida cells colonizing the plaques consisted of both yeast and mycelia, and were directly stained with Calcofluor White M2R. Aggravation of the candidiasis symptoms was dependent on GlcNAc concentration in drinking water, wherein administration of 50 mM GlcNAc not only severely worsened stomach symptoms, but also significantly increased Candida cell number in the stomach and small intestine. The aggravation effect of GlcNAc was enhanced by addition of sedative chemical chlorpromazine chloride after inoculation. In order to semi-quantitatively assess colonization by Candida in the stomach, we devised a new symptom scoring system that represents the extent of the patchy whitish plaques on the mucosal epithelium of the stomach. Histochemical analysis of Candida-infected tissues revealed not only a large amount of thick Candida mycelia invading mucosal epithelial stomach tissues but also infiltrating inflammatory cells. These results suggest that this murine gastrointestinal candidiasis model could serve as a useful tool for evaluating the protective activity of antifungal agents, probiotics, or functional foods against gastrointestinal candidiasis. Furthermore, from another point of view, this novel murine model could also be used to analyze the pathological mechanisms behind the translocation of C. albicans across intestinal barriers, which results in systemic Candida dissemination and infection.

Calibration and validation of models for short-term decomposition and N mineralization of plant residues in the tropics

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Alexandre Ferreira do Nascimento

2012-12-01

Full Text Available Insight of nutrient release patterns associated with the decomposition of plant residues is important for their effective use as a green manure in food production systems. Thus, this study aimed to evaluate the ability of the Century, APSIM and NDICEA simulation models for predicting the decomposition and N mineralization of crop residues in the tropical Atlantic forest biome, Brazil. The simulation models were calibrated based on actual decomposition and N mineralization rates of three types of crop residues with different chemical and biochemical composition. The models were also validated for different pedo-climatic conditions and crop residues conditions. In general, the accuracy of decomposition and N mineralization improved after calibration. Overall RMSE values for the decomposition and N mineralization of the crop materials varied from 7.4 to 64.6% before models calibration compared to 3.7 to 16.3 % after calibration. Therefore, adequate calibration of the models is indispensable for use them under humid tropical conditions. The NDICEA model generally outperformed the other models. However, the decomposition and N mineralization was not very accurate during the first 30 days of incubation, especially for easily decomposable crop residues. An additional model variable may be required to capture initial microbiological growth as affected by the moisture dynamics of the residues, as is the case in surface residues decomposition models.

Emissions of N2O and CH4 from agricultural soils amended with two types of biogas residues

International Nuclear Information System (INIS)

Odlare, M.; Abubaker, J.; Lindmark, J.; Pell, M.; Thorin, E.; Nehrenheim, E.

2012-01-01

Biogas residues contain valuable plant nutrients, important to the crops and also to soil microorganisms. However, application of these materials to the soils may contribute to the emission of greenhouse gases (GHG) causing global warming and climate change. In the present study, incubation experiment was carried out, where the emission rates of N 2 O and CH 4 were measured after amending two soils with two types of biogas residues: (1) a regular residue from a large scale biogas plant (BR) and (2) a residue from an ultra-filtration membrane unit connected to a pilot-scale biogas plant (BRMF). The emissions of N 2 O and CH 4 were measured at two occasions: at 24 h and at 7 days after residue amendment, respectively. Amendment with filtered biogas residues (BRMF) led to an increase in N 2 O emissions with about 6–23 times in organic and clay soil, respectively, in comparison to unfiltered biogas residues (BR). Methane emission was detected in small amounts when filtered biogas residue was added to the soil. Amendment of unfiltered biogas to the organic soil resulted in net consumption. In conclusion, fertilization with BRMF can be combined with risk of an increase N 2 O emission, especially when applied to organic soils. However, in order to transfer these results to real life agriculture, large scale field studies need to be carried out. -- Highlights: ► Membrane filtration of biogas process water is a promising method. ► Fertilization of biogas residue may increase the N 2 O emission from soil. ► Organic soils produced higher emissions than clay soils.

Mechanism of the lysosomal membrane enzyme acetyl coenzyme A: alpha-glucosaminide N-acetyltransferase

International Nuclear Information System (INIS)

Bame, K.J.

1986-01-01

Acetyl-CoA:α-glucosaminide N-acetyltransferase is a lysosomal membrane enzyme, deficient in the genetic disease Sanfilippo C syndrome. The enzyme catalyzes the transfer of an acetyl group from cytoplasmic acetyl-CoA to terminal α-glucosamine residues of heparan sulfate within the organelle. The reaction mechanism was examined using high purified lysosomal membranes from rat liver and human fibroblasts. The N-acetyltransferase reaction is optimal above pH 5.5 and a 2-3 fold stimulation of activity is observed in the presence of 0.1% taurodeoxycholate. Double reciprocal analysis and product inhibition studies indicate that the enzyme works by a Di-Iso Ping Pong Bi Bi mechanism. The binding of acetyl-CoA to the enzyme is measured by exchange label from [ 3 H]CoA to acetyl-CoA, and is optimal at pH's above 7.0. The acetyl-enzyme intermediate is formed by incubating membranes with [ 3 H]acetyl-CoA. The acetyl group can be transferred to glucosamine, forming [ 3 H]N-acetylglucosamine; the transfer is optimal between pH 4 and 5. Lysosomal membranes from Sanfilippo C fibroblasts confirm that these half reactions carried out by the N-acetyltransferase. The enzyme is inactivated by N-bromosuccinimide and diethylpyrocarbonate, indicating that a histidine is involved in the reaction. These results suggest that the histidine residue is at the active site of the enzyme. The properties of the N-acetyltransferase in the membrane, the characterization of the enzyme kinetics, the chemistry of a histidine mediated acetylation and the pH difference across the lysosomal membrane all support a transmembrane acetylation mechanism

Analysis of Protein O-GlcNAcylation by Mass Spectrometry

OpenAIRE

Ma, Junfeng; Hart, Gerald W.

2017-01-01

O-linked β-D-N-acetylglucosamine (O-GlcNAc) addition (O-GlcNAcylation), a post-translational modification of serine/threonine residues of proteins, is involved in diverse cellular metabolic and signaling pathways. Aberrant O-GlcNAcylation underlies the initiation and progression of multiple chronic diseases including diabetes, cancer, and neurodegenerative diseases. Numerous methods have been developed for the analysis of protein O-GlcNAcylation, but instead of discussing the classical bioche...

Pólen 2n e mecanismos meióticos de formação em Solanum commersonii ssp 2n pollen and meiotic mechanisms of Formation in Solanum commersonii ssp

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Lívia Gracielle Oliveira Tomé

2009-04-01

Full Text Available Solanum commersonii subsp. commersonii Dun. e Solanum commersonii subsp. malmeanum Bitt. (2n=2x=24 - 1EBN não podem ser diretamente cruzadas com a batata cultivada de S. tuberosum subsp. tuberosum L. (2n=4x=48 -4 EBN em razão da barreira da ploidia e do número de equilíbrio do endosperma (EBN. No entanto, a produção de pólen não reduzido por S. commersonii ssp. (2x=2n=24 - 1EBN, permite o cruzamento desta com dihaplóides de batata e com as espécies diplóides S. phureja Juz. & Bukasov. e S. chacoense Bitt., que possuem 2 EBN. Conduziu-se este trabalho, com o objetivo de determinar o mecanismo meiótico e a freqüência dos grãos de pólen não reduzidos em cinco clones de Solanum commersonii ssp. Foram avaliados três clones de S. commersonii subsp. commersonii (SCC e dois de S. commersonii subsp. malmeanum (SCM. Nas avaliações, duzentos grãos de pólen viáveis foram corados (carmim acético 2% e mensurados, sendo considerados não reduzidos aqueles com o diâmetro igual ou superior a 25 µm. O clone Solanum commersonii subsp. commersonii Dun. (SCC 100 produz 26.1% de polen não reduzido, por fusos fundidos e fusos paralelos, o qual pode ser utilizado em programas de melhoramento.Solanum commersonii subsp. commersonii Dun. and Solanum commersonii subsp. malmeanum Bitt. (2n=2x=24 -1EBN cannot be directly crossed with the cultivated Solanum tuberosum subsp. Tuberosum L. (2n=4x=48 - 4EBN species due to ploidy barriers and endosperm balance number (EBN. However, non-reduced pollen production by the wild species S. commersonii ssp. (2x=2n=24 -1EBN, allows the crossing of these species with dihaploids of potato and with the diploids species, S. phureja Juz. & Bukasov. and S. chacoense Bitt., all with 2EBN. The aim of this work was to determine the meiotic mechanism and frequency of non-reduced pollen production of five clones of S. commersonii ssp. Three different clones of S. commersonii subsp. commersonii Dun. (SCC and two of S

Dynamic effects of soil bulk density on denitrification and mineralisation by 15N labelled lettuce residue and paper wastes

International Nuclear Information System (INIS)

Hua Luo; Cheng Qing; Vinten, A.J.A.

1997-10-01

Two laboratory incubation experiments aimed to study the denitrification and mineralisation influenced by different additives ( 15 N labelled lettuce residue, paper wastes and mixture of both) and soil bulk densities were carried out by means of acetylene inhibition at the constant 15 degree C for 107 and 90 days, respectively. The results showed that the changes of N 2 O, CO 2 emission rates, inorganic nitrogen (NO 3 - and NH 4 + ), total N and 15 N abundance in the soils which were affected by adding lettuce residue, paper wastes and mixture of both were investigated. Soil denitrification rate increased after lettuce residue was added into soil for 8 days. The maximum rate of N 2 O emission was 15 times higher than that in soil without any additive. However, paper wastes did not increase N 2 O emission in the first 8 days compared with other treatments, mixed residue and paper wastes could promote soil microbial activity, but N 2 O emission was lower than that in the soil with lettuce residue added and higher than that with paper wastes, indicating that mixture of residue and paper wastes was benefit to soil nitrogen immobilisation. CO 2 emission in all the treatments were declined to the same level on the 107 th day. In the treatment added mixed residues and paper wastes, the released CO 2 quantities were higher than those in other treatments every day. Effect of different bulk density on N 2 O and CO 2 emission were response to the change of bulk density, it seems that N 2 O and CO 2 emission increased with bulk density. High bulk density could affect decomposition of paper wastes and NO 3 - , NH 4 + concentration. (30 ref., 10 tabs.)

Comparison of the outcomes between reduced and nonreduced triplet pregnancies achieved by Assisted Reproductive Technology.

Science.gov (United States)

Shiva, Marzieh; Mohammadi Yeganeh, Ladan; Mirzaagha, Elaheh; Chehrazi, Mohammad; Bagheri Lankarani, Narges

2014-10-01

In recent years, the significant increase in multiple pregnancies as a result of assisted reproductive technology (ART) has introduced the concept of multifetal reduction techniques. However, it is still unclear whether there are significant advantages of using this technique. To compare the outcomes of triplet pregnancies achieved by ART managed expectantly with those receiving fetal reduction interventions. In this retrospective study of 115 triplet pregnancies, 57 pregnancies were reduced to twins while 58 were managed expectantly. The fetal loss rate before 24 weeks did not differ between reduced and nonreduced pregnancies (12.3% vs 12.1%). However, the results of those using fetal reduction techniques showed a lower incidence of preterm labour (26.3% vs 50%, P = 0.009), higher mean gestational age at delivery (35.1 ± 2.6 vs 32.4 ± 3.6 weeks, P = 0.002) and higher mean birthweights compared with the control group (2188 ± 547 vs 1674 ± 546 g, P fetal loss. Additionally, there was a lower perinatal mortality, higher live birth rate and lower NICU admission. © 2014 The Royal Australian and New Zealand College of Obstetricians and Gynaecologists.

Use of radioactive glucosamine in the perfused rat liver to prepare α1-acid glycoprotein (orosomucoid) with 3H- or 14C-labelled sialic acid and N-acetylglucosamine residues

International Nuclear Information System (INIS)

Aronson, N.N. Jr.

1982-01-01

A method was developed whereby [1- 14 C]glucosamine was used in a perfused rat liver system to prepare over 2 mg of α 1 -acid glycoprotein with highly radioactive sialic acid and glucosamine residues. The liver secreted radioactive α 1 -acid glycoprotein over a 4-6 h period, and this glycoprotein was purified from the perfusate by chromatography on DEAE-cellulose at pH3.6. The sialic acid on the isolated glycoprotein had a specific radioactivity of 3.1 Ci/mol, whereas the glucosamine-specific radioactivity was 4.3 Ci/mole. The latter amino-sugar residues on the isolated protein were only 13-fold less radioactive than the initially added [1- 14 C]glucosamine. Orosomucoid with a specific radioactivity of 31.3 μCi/mg of protein was obtainable by using [6- 3 H]glucosamine. Many other radioactive glycoproteins were found to be secreted into the perfusate by the liver. Thus this experimental system should prove useful for obtaining other serum glycoproteins with highly radioactive sugar moieties. (author)

Estimates of matter yield and N-uptake in sorghum grown on saline and non-saline soils manured with dhaincha (sesbania aculeata) plant residues utilizing 15N tracer techniques

International Nuclear Information System (INIS)

Kurdali, F.

2002-11-01

Pot experiments were conducted to study the effect of manuring with three types of plant residues (roots, shoots or roots plus shoots) of Dhaincha (Sesbania aculeata Pers.) on the yield and N-uptake of Sorghum bicolor grown in saline and non-saline soils. For measuring various sources of N-uptake, two isotopic dilution techniques were utilized by adding to these soils either 15 N-labelled inorganic N-fertilizer (indirect method) or 15 N-labelled sesbania leaves (direct method). For the indirect method, both soils manured with each type of sesbania residue, received four split applications of 15 N-labelled ammonium sulphate. Results indicated that each type of sesbania residue, applied as a green manure, resulted in significant increases in both dry matter yield and N-uptake of sorghum as compared with the un manured control. Moreover, sesbania residues decreased the harmful effect of salinity on plant growth. Percentages of N derived from residues (%Ndfr) in sorghum grown in non saline soil ranged between 3.9 and 33%; whereas, in saline soil, the observed values ranged between 4.9 and 19.8%. N recoveries in sorghum grown in non saline soil were 61, 45 and 37% of the total amount contained in the sesbania root, shoot and root plus shoot; whereas, values in sorghum grown in saline soils were 48, 14,8 and 15.7%, respectively. The beneficial effects of sesbania residues have been attributed not only to the additional N availability to the plants, but also to its effects on the enhancement of soil N uptake. Percentages and amounts of Ndfr calculated using the indirect method were not significantly different from those obtained by the direct method indicating that the indirect method used herein is feasible and simple for measuring N release from organic residues. It is suggested that the use of Sesbania aculeata residues, particularly the shoots, as a green manure, can provide a substantial portion of total N in sorghum. Moreover, the use of sesbania green manure in

Biosynthesis of heparin. Effects of n-butyrate on cultured mast cells

International Nuclear Information System (INIS)

Jacobsson, K.G.; Riesenfeld, J.; Lindahl, U.

1985-01-01

Murine mastocytoma cells were incubated in vitro with inorganic [ 35 S]sulfate, in the absence or presence of 2.5 mM n-butyrate, and labeled heparin was isolated. The polysaccharide produced in the presence of butyrate showed a lower charge density on anion exchange chromatography than did the control material and a 3-fold increased proportion of components with high affinity for antithrombin. Structural analysis of heparin labeled with [ 3 H] glucosamine in the presence of butyrate showed that approximately 35% of the glucosamine units were N-acetylated, as compared to approximately 10% in the control material; the nonacetylated glucosamine residues were N-sulfated. The presence of butyrate thus leads to an inhibition of the N-deacetylation/N-sulfation process in heparin biosynthesis, along with an augmented formation of molecules with high affinity for antithrombin. Preincubation of the mastocytoma cells with butyrate was required for manifestation of either effect; when the preincubation period was reduced from 24 to 10 h the effects of butyrate were no longer observed. A polysaccharide formed on incubating mastocytoma microsomal fraction with UDP-[ 3 H]glucuronic acid, UDP-N-acetylglucosamine, and 3'-phosphoadenylylsulfate in the presence of 5 mM butyrate showed the same N-acetyl/N-sulfate ratio as did the corresponding control polysaccharide, produced in the absence of butyrate. These findings suggest that the effect of butyrate on heparin biosynthesis depends on the integrity of the cell

Density functional calculations of backbone 15N shielding tensors in beta-sheet and turn residues of protein G

International Nuclear Information System (INIS)

Cai Ling; Kosov, Daniel S.; Fushman, David

2011-01-01

We performed density functional calculations of backbone 15 N shielding tensors in the regions of beta-sheet and turns of protein G. The calculations were carried out for all twenty-four beta-sheet residues and eight beta-turn residues in the protein GB3 and the results were compared with the available experimental data from solid-state and solution NMR measurements. Together with the alpha-helix data, our calculations cover 39 out of the 55 residues (or 71%) in GB3. The applicability of several computational models developed previously (Cai et al. in J Biomol NMR 45:245–253, 2009) to compute 15 N shielding tensors of alpha-helical residues is assessed. We show that the proposed quantum chemical computational model is capable of predicting isotropic 15 N chemical shifts for an entire protein that are in good correlation with experimental data. However, the individual components of the predicted 15 N shielding tensor agree with experiment less well: the computed values show much larger spread than the experimental data, and there is a profound difference in the behavior of the tensor components for alpha-helix/turns and beta-sheet residues. We discuss possible reasons for this.

Nitrogen availability of biogas residues

Energy Technology Data Exchange (ETDEWEB)

El-Sayed Fouda, Sara

2011-09-07

The objectives of this study were to characterize biogas residues either unseparated or separated into a liquid and a solid phase from the fermentation of different substrates with respect to their N and C content. In addition, short and long term effects of the application of these biogas residues on the N availability and N utilization by ryegrass was investigated. It is concluded that unseparated or liquid separated biogas residues provide N at least corresponding to their ammonium content and that after the first fertilizer application the C{sub org}:N{sub org} ratio of the biogas residues was a crucial factor for the N availability. After long term application, the organic N accumulated in the soil leads to an increased release of N.

EFICIENCIA DEL TRATAMIENTO QUÍMICO EN LA PREVENCIÓN DEL TAPONAMIENTO DE GOTEROS APLICANDO AGUA RESIDUAL SANITARIA TRATADA

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RAFAEL OLIVEIRA BATISTA

2009-01-01

Full Text Available El objetivo de este trabajo fue el de verificar la eficiencia del tratamiento químico en la prevención del taponamiento de los sistemas de goteo, cuando se usa aguas residuales sanitarias tratadas. Para la realización del ensayo experimental fue construida una plataforma de ensayos con la finalidad de abastecer cuatro unidades de irrigación por goteo con aguas residuales sanitarias, tratada y filtradas mediante un filtro de disco de 120 mesh. Fueron ensayados tres modelos de goteros (M1, M2 y M3 durante un período de 560 horas. En el tratamiento químico fueron ensayadas las concentraciones de cloro residual libre de 0; 0,4; 1,0 y 1,9 mg L-1. A partir de los resultados obtenidos se tienen las siguientes conclusiones: el agua residual sanitaria, tratada por aplicación vía sistema de irrigación por goteo propicio la formación de un biofilme en los goteros, resultante de la interacción entre colonias de bacterias y algas. La aplicación de cloro en el agua residual sanitaria tratada, minimizó el desarrollo del biofilme en el interior de los goteros y de las líneas laterales de irrigación; además, se encontró que los goteros con mayor diámetro en el laberinto y con mas de un filtro secundario (M2 y M3, son mas susceptibles al taponamiento cuando trabajan con aguas residuales tratadas. La concentración de cloro residual libre de 0,4 mg L-1 fue mas sustentable en la prevención de taponamiento por biofilme en sistemas de riego por goteo que operan con agua residual domestica tratada.

Residual stress in coated low-Z films of TiC and TiN. Pt. 2

International Nuclear Information System (INIS)

Yoshizawa, I.; Kabeya, Z.; Kamada, K.

1984-01-01

The correlations of the residual stresses with microstructures of TiC and TiN films deposited onto various substrates were examined by means of observations of SEM micrographs, X-ray back-reflected Debye rangs and diffraction line profile of X-ray spectrometer chart. It was found that specimens with lower residual stress generally show sharp line profile and good separation between Ksub(α1) and Ksub(α2) diffraction peaks in both TiN and TiC films, indicating better crystalline perfection. PVD coated TiC films on Mo and Inconel substrates show poor separation of Ksub(α1) and Ksub(α2) peaks, namely due to higher residual stresses in comparison with those of CVD coated TiN and TiC films on Mo or Inconel substrate. In CVD TiC/Pocographite system, with film thickness ranging from 10 to 100 μm, the grain size increase with increasing the thickness, except 100 μm thick specimen which has the smallest grain size in this group. However, the sharpness of diffraction profile is best in 20 μm thick film, and worst in 100 μm thick film. This is in good correlation with the amount of residual stress. (orig.)

EVALUACIÓN DEL DESEMPEÑO HIDRAULICO DE TRES GOTEROS APLICANDO AGUA RESIDUAL DE PORCICULTURA

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RAFAEL OLIVEIRA BATISTA

2012-01-01

Full Text Available La realización de este trabajo tuvo por objetivo, analizar el desempeño hidráulico de tres goteros aplicando agua residual de porcicultura tratada. Fue montada una estructura hidráulica de evaluación constituida de tres tipos de goteros (G1, G2 y G3. Se mantuvo la presión del servicio en el inicio de las líneas laterales en 105 kPa y se cuantificaron en intervalo de 20 h, el caudal de los goteros hasta la obtención de un tiempo total de 160 h de operación del sistema. El nivel de taponamiento de los goteros fue obtenido por medio del coeficiente de variación del caudal (CVQ. Con la aplicación de agua residual de porcicultura, hubo un aumento del CVQ a lo largo del tiempo de funcionamiento, solamente en la sub-unidad con gotero G2. Los goteros de mayor caudal e menor largura de laberinto son menos susceptibles al taponamiento. La formación de biofilme fue resultado de la interacción entre sólidos suspendidos, azufre y bacterias, consistiendo en el principal factor de taponamiento parcial y total de los goteros.

Residual stress in the first wall coating materials of TiC and TiN for fusion reactor

International Nuclear Information System (INIS)

Qiu Shaoyu

1997-01-01

Residual stresses measurement in the first wall coating of a fusion reactor of TiC and TiN films by X-ray diffraction 'sin 2 ψ methods' were described. The authors have studied on the effect of conditions of specimen preparation (such as coating method, substrate materials, film thickness and deposition temperature) on the residual stress of TiC and TiN films coated onto Mo, 316LSS and Pocographite by chemical vapor deposition (CVD) and physical vapor deposition (PVD) method. All films prepared in this study were found to have a compressive stresses and the CVD method gave lower residual stress than PVD method. TiC film coated on Mo substrate at 1100 degree C by CVD method showed that residual stress as the film thickness was raised from 14 μm to 60 μm, on the other hand, residual stress by PVD method exhibited a high compressive stresses, this kind of stress was principally the intrinsic stress, and a marked decrease in the residual with raising the deposition temperature (200 degree C∼650 degree C) was demonstrated. Origins of the residual stress were discussed by correlation with differences between thermal expansion coefficients, and also with fabrication methods

Residual pathological stage at radical cystectomy significantly impacts outcomes for initial T2N0 bladder cancer.

Science.gov (United States)

Isbarn, Hendrik; Karakiewicz, Pierre I; Shariat, Shahrokh F; Capitanio, Umberto; Palapattu, Ganesh S; Sagalowsky, Arthur I; Lotan, Yair; Schoenberg, Mark P; Amiel, Gilad E; Lerner, Seth P; Sonpavde, Guru

2009-08-01

We hypothesized that in patients with T2N0 stage disease at transurethral bladder tumor resection a lower residual cancer stage (P1N0 or less) at radical cystectomy may correlate with improved outcomes relative to those with residual P2N0 disease. We analyzed 208 patients with T2N0 stage disease at transurethral bladder tumor resection whose tumors were organ confined at radical cystectomy (P2 or lower, pN0). None received perioperative chemotherapy. Kaplan-Meier as well as univariable and multivariable Cox regression models addressed the effect of residual pT stage at radical cystectomy on recurrence and cancer specific mortality rates. Covariates consisted of age, gender, grade, lymphovascular invasion, carcinoma in situ, number of lymph nodes removed and year of surgery. Residual pT stage at radical cystectomy was P0 in 24 (11.5%) patients, Pa in 9 (4.3%), PCIS in 22 (10.6%), P1 in 35 (16.8%) and P2 in 118 (56.7%). Median followup of censored patients was 55.7 months for recurrence and 52.1 months for cancer specific mortality analyses. The 5-year recurrence-free survival rates of patients with P0/Pa/PCIS, P1 and P2 stage disease were 100%, 85% and 75%, respectively. The 5-year cancer specific survival rates for the same cohorts were 100%, 93% and 81%, respectively. On multivariable analysis the effect of residual stage P1 or lower at radical cystectomy achieved independent predictor status for recurrence (adjusted HR 0.20, p = 0.002) and cancer specific mortality (adjusted HR 0.24, p = 0.02). Down staging from initial T2N0 bladder cancer at transurethral bladder tumor resection to lower stage at radical cystectomy significantly reduces recurrence and cancer specific mortality. Further validation of this finding is warranted.

performance of sorghum grown on a salt affected soil manured with dhaincha plant residues using a 15N isotopic dilution technique

International Nuclear Information System (INIS)

Kurdali, F.; Al-Ain, F.; Razok, A.; Al-Shamma, M.

2008-01-01

A field experiment was conducted on a salt-affected soil to determine the effect of application of three types of Dhaincha (Sesbania aculeata pers.) residues (R, roots; L, shoots; L+R, shoots plus roots) of on the performance of sorghum (Sorghum bicolor L.) using the indirect 15 N isotopic dilution technique. Results indicated that Sesbania residues (L and L+R), used as green manures significantly increased grain yield, dry matter production, N uptake, and water use efficiency of sorghum. Percentages of N derived from residues (%Ndfr) in sorghum ranged from 6.4 to 28%. The N recoveries in sorghum were 52, 19. and 19.7% of the total amount contained in Sesbania roots, shoots and roots plus shoots, respectively. The beneficial effects of Sesbania residues are attributed not only to the additional N availability to the plants, but also to effects on the enhancement of soil N uptake, particularly in the L+R treatment. The findings suggest that the use of Sesbania aculeata residues, as a green manure, can provide a substantial portion of total N in sorghum. In addition, the use of Sesbania green manure in salt-affected soils, as a bio-reclaiming material, can be a promising approach for enhancing plant growth on a sustainable basis. (author)

ORF Alignment: NC_005027 [GENIUS II[Archive

Lifescience Database Archive (English)

Full Text Available NC_005027 gi|32475765 >1zrn0 11 219 5 254 2e-04 ... ref|NP_868759.1| N-acetylglucosamine-6-phosha... ... N-acetylglucosamine-6-phoshatase or p-nitrophenyl ... phosphatase [Pirellula sp.] ... Len

A survey of residual analysis and a new test of residual trend.

Science.gov (United States)

McDowell, J J; Calvin, Olivia L; Klapes, Bryan

2016-05-01

A survey of residual analysis in behavior-analytic research reveals that existing methods are problematic in one way or another. A new test for residual trends is proposed that avoids the problematic features of the existing methods. It entails fitting cubic polynomials to sets of residuals and comparing their effect sizes to those that would be expected if the sets of residuals were random. To this end, sampling distributions of effect sizes for fits of a cubic polynomial to random data were obtained by generating sets of random standardized residuals of various sizes, n. A cubic polynomial was then fitted to each set of residuals and its effect size was calculated. This yielded a sampling distribution of effect sizes for each n. To test for a residual trend in experimental data, the median effect size of cubic-polynomial fits to sets of experimental residuals can be compared to the median of the corresponding sampling distribution of effect sizes for random residuals using a sign test. An example from the literature, which entailed comparing mathematical and computational models of continuous choice, is used to illustrate the utility of the test. © 2016 Society for the Experimental Analysis of Behavior.

Application of in-plane x-ray diffraction technique for residual stress measurement of TiN film/WC-Co alloy

International Nuclear Information System (INIS)

Takago, Shigeki; Yasui, Haruyuki; Awazu, Kaoru; Sasaki, Toshihiko; Hirose, Yukio; Sakurai, Kenji

2006-01-01

An in-plane X-ray diffraction technique was used to measure the residual stress of a CVD (chemical vapor deposition) TiN-coated WC-Co alloy. We could obtain the diffraction pattern from a thin film layer, eliminating that of the substrate. In the case of a conventional X-ray diffractometer, the X-ray penetration depth is about few μm. However, for a grazing incidence beam it is only 0.2μm. Depth profiles of residual stress in TiN film layer were evaluated by the present method and the conventional sin 2 ψ technique. We concluded that the in-plane diffraction technique enables us to determine the residual stress in a DVD-TiN film having an oriented texture. It was found that the residual tensile stress generated a mismatch of the coefficient of thermal expansion between the film and the substrate. (author)

Application of in-plane x-ray diffraction technique for residual stress measurement of TiN film/WC-Co alloy

Energy Technology Data Exchange (ETDEWEB)

Takago, Shigeki; Yasui, Haruyuki; Awazu, Kaoru [Industrial Research Inst. of Ishikawa, Kanazawa, Ishikawa (Japan); Sasaki, Toshihiko; Hirose, Yukio [Kanazawa Univ., Dept. of Materials Science and Engineering, Kanazawa, Ishikawa (Japan); Sakurai, Kenji [National Inst. for Materials Science, Tsukuba, Ibaraki (Japan)

2006-06-15

An in-plane X-ray diffraction technique was used to measure the residual stress of a CVD (chemical vapor deposition) TiN-coated WC-Co alloy. We could obtain the diffraction pattern from a thin film layer, eliminating that of the substrate. In the case of a conventional X-ray diffractometer, the X-ray penetration depth is about few {mu}m. However, for a grazing incidence beam it is only 0.2{mu}m. Depth profiles of residual stress in TiN film layer were evaluated by the present method and the conventional sin{sup 2}{psi} technique. We concluded that the in-plane diffraction technique enables us to determine the residual stress in a DVD-TiN film having an oriented texture. It was found that the residual tensile stress generated a mismatch of the coefficient of thermal expansion between the film and the substrate. (author)

Evaluation of mixing conditions and its influence over free residual Evaluación de las condiciones de mezcla y su influencia sobre el cloro residual entanques de compensación de un sistema de distribución de agua potable

Directory of Open Access Journals (Sweden)

C Montoya

2012-06-01

Full Text Available We performed a real scale evaluation of mixing conditions and its influence on water quality in a compensation tank of drinking-water distribution system located in the city of Cali, Colombia. The hydrodynamic study with continuous injection of tracer, and temperature and free chlorine measurements for identifying the mixing regime in the tank’s interior, residence time, thermal stratification, and chlorine variations in the stored water showed the typical characteristics of a compensation tank. We concluded that water recirculation, inadequate water exchange, low moment fluxes associated with low velocity flows, and punctual thermal stratification could lead to high water age, high residence times in the tank, inadequate mixing, and important loss of free residual chlorine. The methodology developed is suitable for evaluation and optimization of compensation tanks of drinking water distribution systems.Se llevó a cabo una evaluación a escala real de las condiciones de mezcla y su influencia sobre la calidad del agua en un tanque de compensación del sistema de distribución de agua potable de la ciudad de Cali (Colombia. El estudio hidrodinámico con aplicación continua de trazador y mediciones de temperatura y de cloro residual libre para identificar el régimen de mezcla en su interior, tiempos de residencia, estratificación térmica y la variación del cloro en el agua almacenada, evidenciaron el comportamiento propio de un tanque de compensación. Se encontró además que la recirculación y el intercambio insuficiente de agua, los bajos de flujo de momento asociados a caudales pequeños y la estratificación térmica puntual pueden causar elevados tiempos de residencia en el tanque, altas edades del agua, mezcla insuficiente y pérdida importante del cloro residual libre. La metodología aplicada en este estudio es apropiada para la evaluación y optimización de tanques de compensación en sistemas de distribución de agua

Estimation of dinitrogen fixation by cowpea (Vigna unguiculata) using residual soil 15N in poppy (Papaver somniferum L) cowpea sequence

International Nuclear Information System (INIS)

Patra, D.D.; Chand, Sukhmal; Anwar, M.

1994-01-01

Estimation of dinitrogen fixation by cowpea was carried out under greenhouse conditions using pots each containing 12 kg soil. Different 15 N sources included residual soil 15 N where urea was applied to opium poppy before planting of cowpea as fixing and maize as non-fixing crop. Other N sources were labelled urea, 15 N labelled poppy straw, and labelled urea + unlabelled poppy straw. The amount of N 2 fixed varied with the source of 15 N in soil. Plant material treatment gave a higher estimate at 40 days, whereas the estimate was highest with residual 15 N at 75 days. Such variation is attributed to variation in 1 5N enrichment which can be reduced by utilizing the residual 15 N which gives a more stable enrichment of soil 15 N with time. It may also alleviate the errors resulting from the differential pattern of 15 N uptake by fixing and nonfixing plant due to temporal variation in 15 N enrichment in soil. (author). 8 refs., 3 tabs

Caracterización de biodiesel obtenido de aceite residual de cocina

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Betselene Murcia Ordoñez

2013-01-01

Full Text Available Título corto: Biodiesel de aceite residual de cocina Título en ingles: "Characterization of Biodiesel obtained from waste cooking oil" Resumen Se realizó un análisis físico y químico a cada uno de los siguientes tipos de aceite: desechado proveniente de asaderos de pollo, usado de hogares y fresco adquirido en el mercado local de la ciudad de Florencia, Caquetá (Colombia. Se evaluaron los siguientes parámetros: Peso específico, índice de yodo, índice de saponificación, índice de refracción, humedad y materia volátil, punto de fusión, impurezas insolubles, índice de acidez, coeficiente específico de extinción valores K232 y K270, color y prueba de Kreiss. Igualmente se evaluaron los espectros UV-VIS de los tres tipos de aceite estudiados. Se ensayaron siete diferentes tipos de catalizadores para la reacción de transesterificación manteniendo en todos los casos la proporción de catalizador: aceite 38:190 (v/v, tiempo de reacción (2h y temperatura de reacción (60°C. Se lograron rendimientos de biodiesel de 75.8% de aceite desechado usando KOH 1,269%p/v/MeOH 99%; 87.50% de aceite usado con KOH 0,537%p/v/MeOH 99% y 86.60% de aceite fresco usando KOH 0,457%p/v/MeOH 99%. Al biodiesel obtenido en cada caso se le determinó peso específico, índice de refracción, humedad y materia volátil, cenizas sulfatadas, carbón residual, corrosión a la lámina de cobre y perfil de ácidos grasos. En todos los casos hubo predominio de ácido  palmítico, ácido  oléico y ácido  esteárico en los aceites usados y desechados. Del análisis por cromatografía de gases acoplada a espectrometría de masas se pudo establecer que el contenido total de ésteres metílicos de ácidos  grasos es del 98,38% para el biodiesel de aceite desechado; 99,53% para el biodiesel de aceite usado y 97, 69% para el biodiesel de aceite fresco. Palabras clave: aceite residual de cocina; biodiesel; ácidos grasos; transesterificación Abstract Aphysical and

Residual stresses and mechanical properties of Si3N4/SiC multilayered composites with different SiC layers

International Nuclear Information System (INIS)

Liua, S.; Lia, Y.; Chena, P.; Lia, W.; Gaoa, S.; Zhang, B.; Yeb, F.

2017-01-01

The effect of residual stresses on the strength, toughness and work of fracture of Si3N4/SiC multilayered composites with different SiC layers has been investigated. It may be an effective way to design and optimize the mechanical properties of Si3N4/SiC multilayered composites by controlling the properties of SiC layers. Si3N4/SiC multilayered composites with different SiC layers were fabricated by aqueous tape casting and pressureless sintering. Residual stresses were calculated by using ANSYS simulation, the maximum values of tensile and compressive stresses were 553.2MPa and −552.1MPa, respectively. Step-like fracture was observed from the fracture surfaces. Fraction of delamination layers increased with the residual stress, which can improve the reliability of the materials. Tensile residual stress was benefit to improving toughness and work of fracture, but the strength of the composites decreased. [es

Cycling of grain legume residue nitrogen

DEFF Research Database (Denmark)

Jensen, E.S.

1995-01-01

Symbiotic nitrogen fixation by legumes is the main input of nitrogen in ecological agriculture. The cycling of N-15-labelled mature pea (Pisum sativum L.) residues was studied during three years in small field plots and lysimeters. The residual organic labelled N declined rapidly during the initial...... management methods in order to conserve grain legume residue N sources within the soil-plant system....

REDUCCIÓN DE LA CONTAMINACIÓN EN AGUA RESIDUAL INDUSTRIAL LÁCTEA UTILIZANDO MICROORGANISMOS BENÉFICOS

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OSCAR FERNANDO HERRERA A

Full Text Available El agua residual generada en la industria láctea posee altas cargas contaminantes que evidencian impactos en los cuerpos receptores y por tanto hacen necesarios técnicas más potentes para alcanzar las reducciones impuestas por la normatividad ambiental vigente. Los resultados aquí expuestos muestran la capacidad de una mezcla de microorganismos benéficos (MB para reducir cargas contaminantes en agua residual generados en una planta de producción en la industria láctea, teniendo como indicadores, demanda biológica de oxigeno (DBO5, demanda química de oxigeno (DQO, sólidos suspendidos totales (SST y sólidos Totales (ST para dos tipos de residuos, aguas de lavado (mañana y aguas de proceso (tarde, se encontraron reducciones en la DQO de 71,65 % (tarde y 66,96 % (mañana, en la DBO de 68,58 % (tarde y 61,22 % (mañana, en los ST de 70,45 % (tarde y 70,34 % (mañana y para los SST se alcanzaron reducciones de 78,77 % (tarde y 71,48 % (mañana. Los resultados obtenidos experimentalmente fueron analizados mediante un Análisis de varianza (ANOVA permitiendo encontrar niveles de interacción entre las variables de respuesta seleccionadas. Finalmente se hacen recomendaciones necesarias para alcanzar el cumplimiento de la Legislación Ambiental vigente en cuanto a calidad y uso del recurso hídrico

Grain yield and crop N offtake in response to residual fertilizer N in long-term field experiments

DEFF Research Database (Denmark)

Petersen, Jens; Thomsen, Ingrid Kaag; Mattsson, L.

2010-01-01

in four long-term (>35 yr) field experiments, we measured the response of barley (grain yield and N offtake at crop maturity) to six rates (0, 30, 60, 90, 120 and 150 kg N/ha) of mineral fertilizer N (Nnew) applied in subplots replacing the customary long-term plot treatments of fertilizer inputs (Nprev......). Rates of Nprev above 50-100 kg N/ha had no consistent effect on the soil N content, but this was up to 20% greater than that in unfertilized treatments. Long-term unfertilized plots should not be used as control to test the residual value of N in modern agriculture with large production potentials....... Although the effect of mineral Nprev on grain yield and N offtake could be substituted by Nnew within a range of previous inputs, the value of Nprev was not eliminated irrespective of Nnew rate. Provided a sufficient supply of plant nutrients other than N, the use-efficiency of Nnew did not change...

Phosphorylation of TET proteins is regulated via O-GlcNAcylation by the O-linked N-acetylglucosamine transferase (OGT).

Science.gov (United States)

Bauer, Christina; Göbel, Klaus; Nagaraj, Nagarjuna; Colantuoni, Christian; Wang, Mengxi; Müller, Udo; Kremmer, Elisabeth; Rottach, Andrea; Leonhardt, Heinrich

2015-02-20

TET proteins oxidize 5-methylcytosine to 5-hydroxymethylcytosine, 5-formylcytosine, and 5-carboxylcytosine and thus provide a possible means for active DNA demethylation in mammals. Although their catalytic mechanism is well characterized and the catalytic dioxygenase domain is highly conserved, the function of the regulatory regions (the N terminus and the low-complexity insert between the two parts of the dioxygenase domains) is only poorly understood. Here, we demonstrate that TET proteins are subject to a variety of post-translational modifications that mostly occur at these regulatory regions. We mapped TET modification sites at amino acid resolution and show for the first time that TET1, TET2, and TET3 are highly phosphorylated. The O-linked GlcNAc transferase, which we identified as a strong interactor with all three TET proteins, catalyzes the addition of a GlcNAc group to serine and threonine residues of TET proteins and thereby decreases both the number of phosphorylation sites and site occupancy. Interestingly, the different TET proteins display unique post-translational modification patterns, and some modifications occur in distinct combinations. In summary, our results provide a novel potential mechanism for TET protein regulation based on a dynamic interplay of phosphorylation and O-GlcNAcylation at the N terminus and the low-complexity insert region. Our data suggest strong cross-talk between the modification sites that could allow rapid adaption of TET protein localization, activity, or targeting due to changing environmental conditions as well as in response to external stimuli. © 2015 by The American Society for Biochemistry and Molecular Biology, Inc.

Importance of the content and localization of tyrosine residues for thyroxine formation within the N-terminal part of human thyroglobulin

NARCIS (Netherlands)

den Hartog, M. T.; Sijmons, C. C.; Bakker, O.; Ris-Stalpers, C.; de Vijlder, J. J.

1995-01-01

Thyroxine (T4) is formed by coupling of iodinated tyrosine residues within thyroglobulin (TG). In mature TG, some iodinated tyrosine residues are involved preferentially in T4 formation. In order to investigate the specific role of various tyrosine residues in T4 formation, N-terminal TG fragments

Residual analysis applied to S-N data of a surface rolled cast iron

Directory of Open Access Journals (Sweden)

Omar Maluf

2005-09-01

Full Text Available Surface rolling is a process extensively employed in the manufacture of ductile cast iron crankshafts, specifically in regions containing stress concentrators with the main aim to enhance fatigue strength. Such process hardens and introduces compressive residual stresses to the surface as a result of controlled strains, reducing cyclic tensile stresses near the surface of the part. The main purpose of this work was to apply the residual analysis to check the suitability of the S-N approach to describe the fatigue properties of a surface rolled cast iron. The analysis procedure proved to be very efficient and easy to implement and it can be applied in the verification of any other statistical model used to describe fatigue behavior. Results show that the conventional S-N methodology is able to model the high cycle fatigue behavior of surface rolled notch testpieces of a pearlitic ductile cast iron submitted to rotating bending fatigue tests.

Control of residual carbon concentration in GaN high electron mobility transistor and realization of high-resistance GaN grown by metal-organic chemical vapor deposition

Energy Technology Data Exchange (ETDEWEB)

He, X.G. [State Key Laboratory on Integrated Optoelectronics, Institute of Semiconductors, Chinese Academy of Sciences, P.O. Box 912, Beijing 100083 (China); Zhao, D.G., E-mail: dgzhao@red.semi.ac.cn [State Key Laboratory on Integrated Optoelectronics, Institute of Semiconductors, Chinese Academy of Sciences, P.O. Box 912, Beijing 100083 (China); Jiang, D.S.; Liu, Z.S.; Chen, P.; Le, L.C.; Yang, J.; Li, X.J. [State Key Laboratory on Integrated Optoelectronics, Institute of Semiconductors, Chinese Academy of Sciences, P.O. Box 912, Beijing 100083 (China); Zhang, S.M.; Zhu, J.J.; Wang, H.; Yang, H. [Suzhou Institute of Nano-tech and Nano-bionics, Chinese Academy of Sciences, Suzhou 215125 (China)

2014-08-01

GaN films were grown by metal-organic chemical vapor deposition (MOCVD) under various growth conditions. The influences of MOCVD growth parameters, i.e., growth pressure, ammonia (NH{sub 3}) flux, growth temperature, trimethyl-gallium flux and H{sub 2} flux, on residual carbon concentration ([C]) were systematically investigated. Secondary ion mass spectroscopy measurements show that [C] can be effectively modulated by growth conditions. Especially, it can increase by reducing growth pressure up to two orders of magnitude. High-resistance (HR) GaN epilayer with a resistivity over 1.0 × 10{sup 9} Ω·cm is achieved by reducing growth pressure. The mechanism of the formation of HR GaN epilayer is discussed. An Al{sub x}Ga{sub 1−x}N/GaN high electron mobility transistor structure with a HR GaN buffer layer and an additional low-carbon GaN channel layer is presented, exhibiting a high two dimensional electron gas mobility of 1815 cm{sup 2}/Vs. - Highlights: • Influence of MOCVD parameters on residual carbon concentration in GaN is studied. • GaN layer with a resistivity over 1 × 10{sup 9} Ω·cm is achieved by reducing growth pressure. • High electron mobility transistor (HEMT) structures were prepared. • Control of residual carbon content results in HEMT with high 2-D electron gas mobility.

Effects of Carbon and Cover Crop Residues on N2O and N2 Emissions

Science.gov (United States)

Burger, M.; Cooperman, Y.; Horwath, W. R.

2016-12-01

In Mediterranean climate, nitrous oxide emissions occurring with the first rainfall after the dry summer season can contribute up to 50% of agricultural systems' total annual emissions, but the drivers of these emissions have not been clearly identified, and there are only few measurements of atmospheric nitrogen (N2) production (denitrification) during these events. In lab incubations, we investigated N2O and N2 production, gross ammonification and nitrification, and microbial N immobilization with wet-up in soil from a vineyard that was previously fallow or where cover crop residue had been incorporated the previous spring. Before the first rainfall, we measured 120 mg dissolved organic carbon (DOC-C) kg-1 soil in the 0-5 cm layer of this vineyard, and after the rain 10 mg DOC-C kg-1, while nitrate levels before the rain were cover cropped soil. The N2O/N2 production was 2, 7, 9, and 86% in fallow, legume-grass mixture, rye, and legume cover cropped soil. The N2O/N2 ratio tended to increase with lower DOC (post-rain) levels in the soil. The results suggest that accumulated carbon in dry surface soil is the main driving factor of N2O and N2 emissions through denitrification with the first rainfall after prolonged dry periods.

Colistin-Resistant, Lipopolysaccharide-Deficient Acinetobacter baumannii Responds to Lipopolysaccharide Loss through Increased Expression of Genes Involved in the Synthesis and Transport of Lipoproteins, Phospholipids, and Poly-β-1,6-N-Acetylglucosamine

Science.gov (United States)

Henry, Rebekah; Vithanage, Nuwan; Harrison, Paul; Seemann, Torsten; Coutts, Scott; Moffatt, Jennifer H.; Nation, Roger L.; Li, Jian; Harper, Marina; Adler, Ben

2012-01-01

We recently demonstrated that colistin resistance in Acinetobacter baumannii can result from mutational inactivation of genes essential for lipid A biosynthesis (Moffatt JH, et al., Antimicrob. Agents Chemother. 54:4971–4977). Consequently, strains harboring these mutations are unable to produce the major Gram-negative bacterial surface component, lipopolysaccharide (LPS). To understand how A. baumannii compensates for the lack of LPS, we compared the transcriptional profile of the A. baumannii type strain ATCC 19606 to that of an isogenic, LPS-deficient, lpxA mutant strain. The analysis of the expression profiles indicated that the LPS-deficient strain showed increased expression of many genes involved in cell envelope and membrane biogenesis. In particular, upregulated genes included those involved in the Lol lipoprotein transport system and the Mla-retrograde phospholipid transport system. In addition, genes involved in the synthesis and transport of poly-β-1,6-N-acetylglucosamine (PNAG) also were upregulated, and a corresponding increase in PNAG production was observed. The LPS-deficient strain also exhibited the reduced expression of genes predicted to encode the fimbrial subunit FimA and a type VI secretion system (T6SS). The reduced expression of genes involved in T6SS correlated with the detection of the T6SS-effector protein AssC in culture supernatants of the A. baumannii wild-type strain but not in the LPS-deficient strain. Taken together, these data show that, in response to total LPS loss, A. baumannii alters the expression of critical transport and biosynthesis systems associated with modulating the composition and structure of the bacterial surface. PMID:22024825

Colistin-resistant, lipopolysaccharide-deficient Acinetobacter baumannii responds to lipopolysaccharide loss through increased expression of genes involved in the synthesis and transport of lipoproteins, phospholipids, and poly-β-1,6-N-acetylglucosamine.

Science.gov (United States)

Henry, Rebekah; Vithanage, Nuwan; Harrison, Paul; Seemann, Torsten; Coutts, Scott; Moffatt, Jennifer H; Nation, Roger L; Li, Jian; Harper, Marina; Adler, Ben; Boyce, John D

2012-01-01

We recently demonstrated that colistin resistance in Acinetobacter baumannii can result from mutational inactivation of genes essential for lipid A biosynthesis (Moffatt JH, et al., Antimicrob. Agents Chemother. 54:4971-4977). Consequently, strains harboring these mutations are unable to produce the major Gram-negative bacterial surface component, lipopolysaccharide (LPS). To understand how A. baumannii compensates for the lack of LPS, we compared the transcriptional profile of the A. baumannii type strain ATCC 19606 to that of an isogenic, LPS-deficient, lpxA mutant strain. The analysis of the expression profiles indicated that the LPS-deficient strain showed increased expression of many genes involved in cell envelope and membrane biogenesis. In particular, upregulated genes included those involved in the Lol lipoprotein transport system and the Mla-retrograde phospholipid transport system. In addition, genes involved in the synthesis and transport of poly-β-1,6-N-acetylglucosamine (PNAG) also were upregulated, and a corresponding increase in PNAG production was observed. The LPS-deficient strain also exhibited the reduced expression of genes predicted to encode the fimbrial subunit FimA and a type VI secretion system (T6SS). The reduced expression of genes involved in T6SS correlated with the detection of the T6SS-effector protein AssC in culture supernatants of the A. baumannii wild-type strain but not in the LPS-deficient strain. Taken together, these data show that, in response to total LPS loss, A. baumannii alters the expression of critical transport and biosynthesis systems associated with modulating the composition and structure of the bacterial surface.

Effects of ion implantation on the microstructure and residual stress of filter arc CrN films

International Nuclear Information System (INIS)

Weng, K.-W.; Chen, Y.-C.; Han Sheng; Hsu, C.-S.; Chen, Y.-L.; Wang, D.-Y.

2008-01-01

Chromium nitride coatings were deposited using a hybrid physical vapor deposition (PVD) system containing a filter arc deposition (FAD) and a metal plasma ion implantation source (MPII). Exactly how surface residual stress affects film characteristics is investigated using glancing incident X-ray diffraction (GIXRD) and pole figure analyses. Compared with unimplanted CrN, implanted carbon typically increases compressive residual stress and hardness. Wear resistance was also improved by implanted carbon

High hole mobility p-type GaN with low residual hydrogen concentration prepared by pulsed sputtering

Science.gov (United States)

Arakawa, Yasuaki; Ueno, Kohei; Kobayashi, Atsushi; Ohta, Jitsuo; Fujioka, Hiroshi

2016-08-01

We have grown Mg-doped GaN films with low residual hydrogen concentration using a low-temperature pulsed sputtering deposition (PSD) process. The growth system is inherently hydrogen-free, allowing us to obtain high-purity Mg-doped GaN films with residual hydrogen concentrations below 5 × 1016 cm-3, which is the detection limit of secondary ion mass spectroscopy. In the Mg profile, no memory effect or serious dopant diffusion was detected. The as-deposited Mg-doped GaN films showed clear p-type conductivity at room temperature (RT) without thermal activation. The GaN film doped with a low concentration of Mg (7.9 × 1017 cm-3) deposited by PSD showed hole mobilities of 34 and 62 cm2 V-1 s-1 at RT and 175 K, respectively, which are as high as those of films grown by a state-of-the-art metal-organic chemical vapor deposition apparatus. These results indicate that PSD is a powerful tool for the fabrication of GaN-based vertical power devices.

Biorremediación de un suelo agrícola impactado con aceite residual automotriz

OpenAIRE

Pasaye Anaya, Lizbeth

2011-01-01

El aceite residual automotriz (ARA) derivado del uso de automotores es una mezcla de hidrocarburos (HC) alifáticos, aromáticos y otros que en el suelo impide la actividad microbiana para el reciclaje de elementos esenciales para la vida. El objetivo de este trabajo fue analizar la biorremediación (BR) por bioestimulación (BS) de un suelo agrícola impactado con ARA. Para ello, el suelo contaminado con la mezcla de HC se biorremedió por BS con una solución mineral (SM), lombricomposta (LC) y ab...

Caracterización química del aceite y harina residual de solanum sisymbriifolium lam

Directory of Open Access Journals (Sweden)

Wiese, B.

2001-04-01

Full Text Available Seeds from Solanum sisymbriifolium Lam harvested at Olavarría (Buenos Aires, Argentine were defatted with hexane and the raw oil obtained with a yield of 20,6 % dry basis. The physicochemical characteristics of crude oil were: refractive index: 1,4610 (at 25ºC, iodine value: 112,8; saponification index: 170,0; unsaponifiable matter: 14,0 % and free fatty acid content: 2,4 (mg KOH/g. The fatty acid composition of seed oil was studied by gas-liquid chromatography. Major fatty acids of seed oil were: linoleic (52,3%, oleic (23,4 % and palmitic acid (16,4 %. The residual seed meal contained moderate level of crude protein (14,75%, dry basis, low level of available lysine (2,25 g/16gN and high content of crude fiber (51,5%, dry basis. Total and phytic acid phosphorous, calcium, ash, sugar and polysaccharides contents are reported.Semillas de Solanum sisymbriifolium Lam cosechadas en Olavarría (prov. de Buenos Aires, Argentina se trataron con hexano (soxhlet obteniéndose el aceite crudo (rendimiento:20,6% y la harina residual de extracción. Las características fisicoquímicas del aceite crudo fueron: Índice de refracción: 1.4610 (a 25ºC; Índice de iodo: 112,8; Índice de saponificación: 170,0; Insaponificable: 14,0%, Índice de acidez: 2,4 (mgKOH/g. Se determinó la composición acídica del aceite por cromatografía gas-líquido. Los ácidos grasos mayoritarios fueron: ácido linoleico (52,3%, ácido oleico (23,4% y ácido palmítico (16,4%. La harina residual de extracción contenía una moderada proporción de proteína cruda (14,75% b.s, baja proporción de lisina disponible (2,25 g/16gN y un alto contenido de fibra cruda (51,5 %b.s. Se informan valores de fósforo total y de ácido fítico, cenizas, calcio e hidratos de carbono.

The effect of elevated CO2 and N on decomposition of wheat straw and alfalfa residues in calcareous and non calcareous soils

Directory of Open Access Journals (Sweden)

S. Razavi Darbar

2016-04-01

Full Text Available Incorporation of plant residue in soils is considered as an important agricultural practice for maintaining soil fertility in sustainable agricultural system. CO2 levels, nitrogen fertilization and plant residues are factors which highly affect decomposition of added organic matter to soil. In this research controlled chambers were used to investigate the effects of elevated atmospheric CO2 concentrations (350 vs. 760 CO2 ppm under two N fertilization levels (0 vs. 500 kg N ha-1 and two replicates on decomposition of wheat and alfalfa residues in two calcareous (32.66 % CaCO3 and non calcareous soils (3.4 % CaCO3 at 6 times (0, 10, 20, 40, 60 and 90 under laboratory condition. Soil moistures were adjusted at 70% of field capacity. The results showed that elevated CO2 significantly increased decomposition of residues in both calcareous and non calcareous soils. In the samples that received N fertilizer, decomposition of wheat straw and alfalfa residues increased in both soils. From the obtained results, we concluded that in all treatments the amount of decomposition of wheat straw and alfalfa residues in calcareous soil were higher than non calcareous soils.

Enterocin F4-9, a Novel O-Linked Glycosylated Bacteriocin.

Science.gov (United States)

Maky, Mohamed Abdelfattah; Ishibashi, Naoki; Zendo, Takeshi; Perez, Rodney Honrada; Doud, Jehan Ragab; Karmi, Mohamed; Sonomoto, Kenji

2015-07-01

Enterococcus faecalis F4-9 isolated from Egyptian salted-fermented fish produces a novel bacteriocin, termed enterocin F4-9. Enterocin F4-9 was purified from the culture supernatant by three steps, and its molecular mass was determined to be 5,516.6 Da by mass spectrometry. Amino acid and DNA sequencing showed that the propeptide consists of 67 amino acid residues, with a leader peptide containing a double glycine cleavage site to produce a 47-amino-acid mature peptide. Enterocin F4-9 is modified by two molecules of N-acetylglucosamine β-O-linked to Ser37 and Thr46. The O-linked N-acetylglucosamine moieties are essential for the antimicrobial activity of enterocin F4-9. Further analysis of the enterocin F4-9 gene cluster identified enfC, which has high sequence similarity to a glycosyltransferase. The antimicrobial activity of enterocin F4-9 covered a limited range of bacteria, including, interestingly, a Gram-negative strain, Escherichia coli JM109. Enterocin F4-9 is sensitive to protease, active at a wide pH range, and moderately resistant to heat. Copyright © 2015, American Society for Microbiology. All Rights Reserved.

Distribution of residues and primitive roots

Indian Academy of Sciences (India)

Replacing the function f by g, we get the required estimate for N(p, N). D. Proof of Theorem 1.1. When p = 7, we clearly see that (1, 2) is a consecutive pair of quadratic residue modulo 7. Assume that p ≥ 11. If 10 is a quadratic residue modulo p, then we have (9, 10) as a consecutive pair of quadratic residues modulo p, ...

Regulación de las emociones y la depresión residual predicen el funcionamiento psicosocial en el trastorno bipolar: estudio preliminar

OpenAIRE

Becerra, Rodrigo; Edith Cowan University; Cruise, Kate; Edith Cowan University; Harms, Craig; Edith Cowan University; Allan, Alfred; Edith Cowan University; Bassett, Darryl; 1. Psychiatrist in Private Practice, Perth WA, Australia 2. School of Psychiatry & Clinical Neurosciences (M521), University of Western Australia, Perth WA, Australia; Hood, Sean; School of Psychiatry & Clinical Neurosciences (M521), University of Western Australia, Perth WA, Australia; Murray, Greg; School of Psychology, Swinburne University of Technology, VIC, Australia.

2015-01-01

Este estudio explora el valor predictivo de los diversos procesos de regulación clínicos, neuropsicológicos, funcionales y emocionales para la recuperación en el Trastorno Bipolar. La información clínica y demográfica se recogió de 27 participantes de TB eutímicos o residualmente deprimidos. Setenta y uno por ciento de la muestra reportó algún grado de deterioro en el funcionamiento psicosocial. Tanto la depresión residual y problemas con la regulación de las emociones fueron identificados co...

Identification and phylogenetic relationship of Iranian strains of various Leishmania species isolated from cutaneous and visceral cases of leishmaniasis based on N-acetylglucosamine-1-phosphate transferase gene.

Science.gov (United States)

Hajjaran, Homa; Mohebali, Mehdi; Teimouri, Aref; Oshaghi, Mohammad Ali; Mirjalali, Hamed; Kazemi-Rad, Elham; Shiee, Mohammad Reza; Naddaf, Saied Reza

2014-08-01

The identity of Iranian Leishmania species has been resolved to some extent by some genetic markers. In this study, based on N-acetylglucosamine-1-phosphate transferase (nagt) gene, we further elucidated the identity and phylogeny of the prevalent species in this country. DNAs of 121 isolates belonging to cutaneous leishmaniasis (CL) patients, canine visceral leishmaniasis (CVL) cases, and Rhombomys opimus rodents were amplified by targeting a partial sequence of nagt gene. All the amplicons were analyzed with restriction fragment length polymorphism (RFLP) using Acc1 enzyme, and 49 amplicons representing different reservoir hosts were sequenced and aligned with similar sequences from GenBank database. The RFLP analysis revealed that 41 CL patients were infected Leishmania tropica and 36 with Leishmania major. Among 10 CVL isolates, 6 were identified as Leishmania infantum and 4 as L. tropica. Amongst 34 rodents' isolates, 11 and 23 isolates exhibited patterns similar to those of L. major, and L. tropica/Leishmania turanica, respectively. The sequencing results from all CL patients, CVL cases, and 4 reservoir rodents were in agreement with RFLP analysis and showed 99-100% homologies with the registered species of L. major, L. tropica, and L. infantum from Turkey, Tunisia, Iraq and Israel. Of the 7 rodent isolates exhibiting RFLP patterns similar to L. tropica/L. turanica, 3 exhibited the highest homologies (99-100%) with L. turanica and 4 with Leishmania gerbilli. The 49 nagt DNA sequences were grouped into five clusters representing L. major, L. tropica, L. infantum, L. turanica and L. gerbilli species, encompassing 19 haplotypes. No correlation was observed between intraspecies divergence and geographic distribution of haplotypes. The L. tropica haplotypes exhibited more homologies with those of L. infantum than L. major (97.2% vs. 96.9%), a probable indication to the potential ability of L. tropica to visceralize. Characterization of Iranian Leishmania isolates

SwissProt search result: AK069901 [KOME

Lifescience Database Archive (English)

Full Text Available AK069901 J023034C14 (O95394) Phosphoacetylglucosamine mutase (EC 5.4.2.3) (PAGM) (Acetylglucosa...mine phosphomutase) (N-acetylglucosamine-phosphate mutase) (Phosphoglucomutase 3) AGM1_HUMAN 1e-102 ...

SwissProt search result: AK069901 [KOME

Lifescience Database Archive (English)

Full Text Available AK069901 J023034C14 (Q09770) Probable phosphoacetylglucosamine mutase 2 (EC 5.4.2.3) (PAGM) (Acetylglucosa...mine phosphomutase) (N-acetylglucosamine-phosphate mutase) AGM2_SCHPO 3e-89 ...

Escherichia coli photoreactivating enzyme: purification and properties

International Nuclear Information System (INIS)

Snapka, R.M.; Sutherland, B.M.

1980-01-01

Researchers have purified large quantities of Escherichia coli photoreactivating enzyme to apparent homogeneity and have studied its physical and chemical properties. The enzyme has a molecular weight of 36,800 and a S/sub 20,w/ 0 of 3.72 S. Amino acid analysis revealed an apparent absence of tryptophan, a low content of aromatic residues, and the presence of no unusual amino acids. The N terminus is arginine. The purified enzyme contained up to 13% carbohydrate by weight. The carbohydrate was composed of mannose, galactose, glucose, and N-acetylglucosamine. The enzyme is also associated with RNA containing uracil, adenine, guanine, and cytosine with no unusual bases detected

PKC phosphorylates residues in the N-terminal of the DA transporter to regulate amphetamine-induced DA efflux.

Science.gov (United States)

Wang, Qiang; Bubula, Nancy; Brown, Jason; Wang, Yunliang; Kondev, Veronika; Vezina, Paul

2016-05-27

The DA transporter (DAT), a phosphoprotein, controls extracellular dopamine (DA) levels in the central nervous system through transport or reverse transport (efflux). Multiple lines of evidence support the claim that PKC significantly contributes to amphetamine-induced DA efflux. Other signaling pathways, involving CaMKII and ERK, have also been shown to regulate DAT mediated efflux. Here we assessed the contribution of putative PKC residues (S4, S7, S13) in the N-terminal of the DAT to amphetamine-induced DA efflux by transfecting DATs containing different serine to alanine (S-A) point mutations into DA pre-loaded HEK-293 cells and incubating these cells in amphetamine (2μM). The effects of a S-A mutation at the non-PKC residue S12 and a threonine to alanine (T-A) mutation at the ERK T53 residue were also assessed for comparison. WT-DATs were used as controls. In an initial experiment, we confirmed that inhibiting PKC with Go6976 (130nM) significantly reduced amphetamine-induced DA efflux. In subsequent experiments, cells transfected with the S4A, S12A, S13A, T53A and S4,7,13A mutants showed a reduction in amphetamine-induced DA efflux similar to that observed with Go6976. Interestingly, cells transfected with the S7A mutant, identified by some as a PKC-PKA residue, showed unperturbed WT-DAT levels of amphetamine-induced DA efflux. These results indicate that phosphorylation by PKC of select residues in the DAT N-terminal can regulate amphetamine-induced efflux. PKC can act either independently or in concert with other kinases such as ERK to produce this effect. Copyright © 2016 Elsevier Ireland Ltd. All rights reserved.

The N-glycan processing enzymes α-mannosidase and β-D-N-acetylhexosaminidase are involved in ripening-associated softening in the non-climacteric fruits of capsicum

Science.gov (United States)

Ghosh, Sumit; Meli, Vijaykumar S.; Kumar, Anil; Thakur, Archana; Chakraborty, Niranjan; Chakraborty, Subhra; Datta, Asis

2011-01-01

Excessive softening of fruits during the ripening process leads to deterioration. This is of significant global importance as softening-mediated deterioration leads to huge postharvest losses. N-glycan processing enzymes are reported to play an important role during climacteric fruit softening: however, to date these enzymes have not been characterized in non-climacteric fruit. Two ripening-specific N-glycan processing enzymes, α-mannosidase (α-Man) and β-D-N-acetylhexosaminidase (β-Hex), have been identified and targeted to enhance the shelf life in non-climacteric fruits such as capsicum (Capsicum annuum). The purification, cloning, and functional characterization of α-Man and β-Hex from capsicum, which belong to glycosyl hydrolase (GH) families 38 and 20, respectively, are described here. α-Man and β-Hex are cell wall glycoproteins that are able to cleave terminal α-mannose and β-D-N-acetylglucosamine residues of N-glycans, respectively. α-Man and β-Hex transcripts as well as enzyme activity increase with the ripening and/or softening of capsicum. The function of α-Man and β-Hex in capsicum softening is investigated through RNA interference (RNAi) in fruits. α-Man and β-Hex RNAi fruits were approximately two times firmer compared with the control and fruit deterioration was delayed by approximately 7 d. It is shown that silencing of α-Man and β-Hex enhances fruit shelf life due to the reduced degradation of N-glycoproteins which resulted in delayed softening. Altogether, the results provide evidence for the involvement of N-glycan processing in non-climacteric fruit softening. In conclusion, genetic engineering of N-glycan processing can be a common strategy in both climacteric and non-climacteric species to reduce the post-harvest crop losses. PMID:21030387

Diode characteristics and residual deep-level defects of p+n abrupt junctions fabricated by rapid thermal annealing of boron implanted silicon

International Nuclear Information System (INIS)

Usami, A.; Katayama, M.; Wada, T.; Tokuda, Y.

1987-01-01

p + n diodes were fabricated by rapid thermal annealing (RTA) of boron implanted silicon in the annealing temperature range 700-1100 0 C for around 7 s, and the RTA temperature dependence of electrical characteristics of these diodes was studied. Deep-level transient spectroscopy (DLTS) measurements were made to evaluate residual deep-level defects in the n-type bulk. Three electron traps were observed in p + n diodes fabricated by RTA at 700 0 C. It was considered that these three traps were residual point defects near the tail of the implantation damage after RTA. Residual defect concentrations increased in the range 700-900 0 C and decreased in the range 1000-1100 0 C. The growth of defects in the bulk was ascribed to the diffusion of defects from the implanted layer during RTA. Concentrations of electron traps observed in p + n diodes fabricated by RTA at 1100 0 C were approx. 10 12 cm -3 . It was found that these residual deep-level defects observed by DLTS were inefficient generation-recombination centres since the reverse current was independent of the RTA temperatures. (author)

SwissProt search result: AK069901 [KOME

Lifescience Database Archive (English)

Full Text Available AK069901 J023034C14 (Q9CYR6) Phosphoacetylglucosamine mutase (EC 5.4.2.3) (PAGM) (Acetylglucosa...mine phosphomutase) (N-acetylglucosamine-phosphate mutase) (Phosphoglucomutase 3) AGM1_MOUSE 1e-103 ...

Inference of Functionally-Relevant N-acetyltransferase Residues Based on Statistical Correlations.

Directory of Open Access Journals (Sweden)

Andrew F Neuwald

2016-12-01

Full Text Available Over evolutionary time, members of a superfamily of homologous proteins sharing a common structural core diverge into subgroups filling various functional niches. At the sequence level, such divergence appears as correlations that arise from residue patterns distinct to each subgroup. Such a superfamily may be viewed as a population of sequences corresponding to a complex, high-dimensional probability distribution. Here we model this distribution as hierarchical interrelated hidden Markov models (hiHMMs, which describe these sequence correlations implicitly. By characterizing such correlations one may hope to obtain information regarding functionally-relevant properties that have thus far evaded detection. To do so, we infer a hiHMM distribution from sequence data using Bayes' theorem and Markov chain Monte Carlo (MCMC sampling, which is widely recognized as the most effective approach for characterizing a complex, high dimensional distribution. Other routines then map correlated residue patterns to available structures with a view to hypothesis generation. When applied to N-acetyltransferases, this reveals sequence and structural features indicative of functionally important, yet generally unknown biochemical properties. Even for sets of proteins for which nothing is known beyond unannotated sequences and structures, this can lead to helpful insights. We describe, for example, a putative coenzyme-A-induced-fit substrate binding mechanism mediated by arginine residue switching between salt bridge and π-π stacking interactions. A suite of programs implementing this approach is available (psed.igs.umaryland.edu.

Inference of Functionally-Relevant N-acetyltransferase Residues Based on Statistical Correlations.

Science.gov (United States)

Neuwald, Andrew F; Altschul, Stephen F

2016-12-01

Over evolutionary time, members of a superfamily of homologous proteins sharing a common structural core diverge into subgroups filling various functional niches. At the sequence level, such divergence appears as correlations that arise from residue patterns distinct to each subgroup. Such a superfamily may be viewed as a population of sequences corresponding to a complex, high-dimensional probability distribution. Here we model this distribution as hierarchical interrelated hidden Markov models (hiHMMs), which describe these sequence correlations implicitly. By characterizing such correlations one may hope to obtain information regarding functionally-relevant properties that have thus far evaded detection. To do so, we infer a hiHMM distribution from sequence data using Bayes' theorem and Markov chain Monte Carlo (MCMC) sampling, which is widely recognized as the most effective approach for characterizing a complex, high dimensional distribution. Other routines then map correlated residue patterns to available structures with a view to hypothesis generation. When applied to N-acetyltransferases, this reveals sequence and structural features indicative of functionally important, yet generally unknown biochemical properties. Even for sets of proteins for which nothing is known beyond unannotated sequences and structures, this can lead to helpful insights. We describe, for example, a putative coenzyme-A-induced-fit substrate binding mechanism mediated by arginine residue switching between salt bridge and π-π stacking interactions. A suite of programs implementing this approach is available (psed.igs.umaryland.edu).

NCBI nr-aa BLAST: CBRC-FRUB-02-0655 [SEVENS

Lifescience Database Archive (English)

Full Text Available CBRC-FRUB-02-0655 ref|NP_037376.1| UDP-N-acetylglucosamine: alpha-1,3-D-mannoside beta-1,4-N-acetylglucosa...minyltransferase IV [Homo sapiens] sp|Q9UBM8|MGT4C_HUMAN Alpha-1,3-mannosyl-glycoprotein 4-beta-N-acetylglucos...aminyltransferase C (UDP-N-acetylglucosamine: alpha-1,3-D-mannoside beta-1,4-N-acetylglucosa...minyltransferase IVc) (N-glycosyl-oligosaccharide-glycoprotein N-acetylglucosa...minyltransferase IVc) (N-acetylglucosaminyltransferase IVc) (GnT-IVc) (GlcNAc-T IVc) (N-acetylglucosam

Hydride vapor phase GaN films with reduced density of residual electrons and deep traps

International Nuclear Information System (INIS)

Polyakov, A. Y.; Smirnov, N. B.; Govorkov, A. V.; Yugova, T. G.; Cox, H.; Helava, H.; Makarov, Yu.; Usikov, A. S.

2014-01-01

Electrical properties and deep electron and hole traps spectra are compared for undoped n-GaN films grown by hydride vapor phase epitaxy (HVPE) in the regular process (standard HVPE samples) and in HVPE process optimized for decreasing the concentration of residual donor impurities (improved HVPE samples). It is shown that the residual donor density can be reduced by optimization from ∼10 17  cm −3 to (2–5) × 10 14  cm −3 . The density of deep hole traps and deep electron traps decreases with decreased donor density, so that the concentration of deep hole traps in the improved samples is reduced to ∼5 × 10 13  cm −3 versus 2.9 × 10 16  cm −3 in the standard samples, with a similar decrease in the electron traps concentration

Residual stress determination in PECVD TiN coatings by X-ray diffraction: a parametric study

DEFF Research Database (Denmark)

Thomsen, N.B.; Horsewell, Andy; Mogensen, K.S.

1998-01-01

The main objective of this research is to study the residual macroscopic stress in titanium-nitride, TiN, coatings deposited onto a tool steer substrate. The measurements were performed with a theta-theta decoupled X-ray diffractometer. The coatings were manufactured using an industrial pulsed...

Sulfhydryl group content of chicken progesterone receptor: effect of oxidation on DNA binding activity

International Nuclear Information System (INIS)

Peleg, S.; Schrader, W.T.; O'Malley, B.W.

1988-01-01

DNA binding activity of chicken progesterone receptor B form (PRB) and A form (PRA) has been examined. This activity is strongly dependent upon the presence of thiols in the buffer. Stability studies showed that PRB was more sensitive to oxidation that was PRA. Receptor preparations were fractionated by DNA-cellulose chromatography to DNA-positive and DNA-negative subpopulations, and sulfhydryl groups were quantified on immunopurified receptor by labeling with [ 3 H]-N-ethylmaleimide. Labeling of DNA-negative receptors with [ 3 H]-N-ethylmaleimide showed 21-23 sulfhydryl groups on either PRA or PRB form when the proteins were reduced and denatured. A similar number was seen without reduction if denatured DNA-positive receptor species were tested. In contrast, the DNA-negative PRB had only 10-12 sulfhydryl groups detectable without reduction. A similar number (12-13 sulfhydryl groups) was found for PRA species that lost DNA binding activity after exposure to a nonreducing environment in vitro. The authors conclude that the naturally occurring receptor forms unable to bind to DNA, as well as receptor forms that have lost DNA binding activity due to exposure to nonreducing environment in vitro, contain 10-12 oxidized cysteine residues, likely present as disulfide bonds. Since they were unable to reduce the disulfide bonds when the native DNA-negative receptor proteins were treated with dithiothreitol (DTT), they speculate that irreversible loss of DNA binding activity of receptor in vitro is due to oxidation of cysteine residues that are not accessible to DTT in the native state

Barley Benefits from Organic Nitrogen in Plant Residues Applied to Soil using 15N Isotope Dilution

International Nuclear Information System (INIS)

Gadalla, A.M.; Galal, Y.G.M.; Abdel Aziz, H.A.; El-Degwy, S.M.A.; Abd El-Haleem, M.

2008-01-01

The experiment was carried out in pots (sandy soil cultivated with Barley plant) under greenhouse conditions, at Inshas, Egypt. The aim was to evaluate the transformation of nitrogen applied either as mineral form ( 15 NH 4 ) 2 SO 4 , or as organic-material-N (plant residues) .Basal recommended doses of P and K were applied. Labeled 15 N as( 15 NH 4 ) 2 SO 4 (5 % a.e) or plant residues (ground leuceana forage, compost, and mixture of them) were applied at a rate of 20 kg N/ ha). 15 N technique was used to evaluate N-uptake and fertilizer use efficiency. The treatments were arranged in a completely randomized block design under greenhouse conditions. The obtained results showed that the dry weight of barley shoots was positively affected by reinforcement of mineral- N with organic-N. On the other hand, the highest dry weight was estimated with leuceana either applied alone or reinforced with mineral N. Similar trend was noticed with N uptake but only with organic N, while with treatment received 50% organic-N. plus 50% mineral- N. the best value of N uptake was recorded with mixture of leuceana and compost. The amount of Ndff was lowest where fertilizer 15 N was applied alone. Comparing Ndff for the three organic treatments which received a combination of fertilizer- 15 N+organic-material-N, results showed that the highest Ndff was occurred with mixture of leuceana and compost, whereas the lowest was induced with individual leuceana treatment. 15 N recovery in shoots of barley ranged between 22.14 % to 82.16 %. The lowest occurred with application of mineral 15 N alone and; the highest occurred where mineral 15 N was mixed with compost or leucaena-compost mixture

Cycling of fertilizer and cotton crop residue nitrogen

International Nuclear Information System (INIS)

Rochester, I.J.; Constable, G.A.; MacLeod, D.A.

1993-01-01

Mineral nitrogen (N), nitrate and ammonium contents were monitored in N-fertilized soils supporting cotton crops to provide information on the nitrification, mineralization and immobilization processes operating in the soil. The relative contributions of fertilizer N, previous cotton crop residue N and indigenous soil N to the mineral N pools and to the current crop's N uptake were calculated. After N fertilizer (urea) application, the soil's mineral N content rose rapidly and subsequently declined at a slower rate. The recovery of 15 N-labelled urea as mineral N declined exponentially with time. Biological immobilization (and possibly denitrification to some extent) were believed to be the major processes reducing post-application soil mineral N content. Progressively less N was mineralized upon incubation of soil sampled through the growing season. Little soil N (either from urea or crop residue) was mineralized at crop maturity. Cycling of N was evident between the soil mineral and organic N pools throughout the cotton growing season. Considerable quantities of fertilizer N were immobilized by the soil micro biomass; immobilized N was remineralized and subsequently taken up by the cotton crop. A large proportion of the crop N was taken up in the latter part of the season when the soil mineral N content was low. It is suggested that much of the N taken up by cotton was derived from microbial sources, rather than crop residues. The application of cotton crop residue (stubble) slightly reduced the mineral N content in the soil by encouraging biological immobilization. 15 N was mineralized very slowly from the labelled crop residue and did not contribute significantly to the supply of N to the current crop. Recovery of labelled fertilizer N and labelled crop residue N by the cotton crop was 28% and 1%, respectively. In comparison, the apparent recovery of fertilizer N was 48%. Indigenous soil N contributed 68% of the N taken up by the cotton crop. 33 refs., 1 tab

Prefermentación de agua residual urbana empleando un reactor biopelícula de lecho sumergido

OpenAIRE

Castillo de Castro, Pedro; González Ruiz, Guarocuya; Tejero Monzón, Iñaki

1999-01-01

Esta investigación describe la acidificación de agua residual urbana (ARU). La experimentación se llevó a cabo utilizando un reactor biopelícula de lecho sumergido fijo (BLSF), en el cual se produce la hidrólisis de los sólidos en suspensión retenidos en la zona de decantación del reactor, mientras que la biomasa de la biopelícula se encarga de la acidificación del medio. Se operó bajo cargas orgánicas aplicadas (COA) comprendidas entre 0,5 y 23 kg DQO/m3·d, tiempos de retención hidráulico (T...

Earthworm-induced N2O emissions in a sandy soil with surface-applied crop residues

NARCIS (Netherlands)

Giannopoulos, G.; Groenigen, van J.W.; Pulleman, M.M.

2011-01-01

Earlier research with endogeic and epigeic earthworm species in loamy arable soil has shown that both earthworm groups can increase nitrous oxide (N2O) emissions, provided that crop residue placement matches the feeding strategy of the earthworm ecological group(s). However, it is not yet clear

Mineralization of nitrogen from nitrogen-15 labeled crop residues and utilization by rice

International Nuclear Information System (INIS)

Norman, R.J.; Gilmour, J.T.; Wells, B.R.

1990-01-01

The availability of N from the residues of the previous crop to the subsequent rice (Oryza sativa L.) crop is largely unknown. The objectives of this study were to (1) measure the mineralization of N from 15 N-labeled rice, soybean (Glycine max L.), and wheat (Triticum aestivum L.) residues and the uptake by a subsequent rice crop; and (2) compare the 15 N tracer method with the standard fertilizer-N response method used in field studies to quantify the N contribution from the crop residue to the next crop. Nitrogen mineralization from decomposing crop residues was measured by soil sampling prior to seeding the rice crop and after seeding by plant sampling the rice at maturity. The minimum estimate of the amount of residue N mineralized from the time of residue incorporation until rice harvest was 9, 52, and 38% of the rice, soybean, and wheat residue N, respectively. The amount of residue N recovered in the rice crop was 3, 11, and 37% of the rice, soybean, and wheat residue N, respectively. The lower the C/N ratio and the higher the amount of N in the residue, the lower was the amount of residue N recovered in the soil organic fraction at harvest and the higher was the amount of residue N mineralized. The 15 N tracer method compared favorably with the fertilizer N response method when the uptake efficiency of the fertilizer N was taken into account

Woody legume fallow productivity, biological N2-fixation and residual benefits to two successive maize crops in Zimbabwe

NARCIS (Netherlands)

Chikowo, R.; Mapfumo, P.; Nyamugafata, P.; Giller, K.E.

2004-01-01

Three woody legumes were planted as two-year 'improved fallows' to evaluate their residual nitrogen (N) effects on two subsequent maize crops under minimum and conventional tillage management. Maize monoculture and cowpea-maize-maize sequence treatments were included as controls. N-2-fixation was

SwissProt search result: AK069901 [KOME

Lifescience Database Archive (English)

Full Text Available AK069901 J023034C14 (P57750) Probable phosphoacetylglucosamine mutase (EC 5.4.2.3) (PAGM) (Acetylglucosa...mine phosphomutase) (N-acetylglucosamine-phosphate mutase) (DNA-damage-repair/toleration protein DRT101) AGM1_ARATH 1e-174 ...

Production of complex multiantennary N-glycans in Nicotiana benthamiana plants.

Science.gov (United States)

Nagels, Bieke; Van Damme, Els J M; Pabst, Martin; Callewaert, Nico; Weterings, Koen

2011-03-01

In recent years, plants have been developed as an alternative expression system to mammalian hosts for the production of therapeutic proteins. Many modifications to the plant glycosylation machinery have been made to render it more human because of the importance of glycosylation for functionality, serum half-life, and the safety profile of the expressed proteins. These modifications include removal of plant-specific β1,2-xylose and core α1,3-fucose, and addition of bisecting N-acetylglucosamine, β1,4-galactoses, and sialic acid residues. Another glycosylation step that is essential for the production of complex human-type glycans is the synthesis of multiantennary structures, which are frequently found on human N-glycans but are not generated by wild-type plants. Here, we report both the magnICON-based transient as well as stable introduction of the α1,3-mannosyl-β1,4-N-acetylglucosaminyltransferase (GnT-IV isozymes a and b) and α1,6-mannosyl-β1,6-N-acetylglucosaminyltransferase (GnT-V) in Nicotiana benthamiana plants. The enzymes were targeted to the Golgi apparatus by fusing their catalytic domains to the plant-specific localization signals of xylosyltransferase and fucosyltransferase. The GnT-IV and -V modifications were tested in the wild-type background, but were also combined with the RNA interference-mediated knockdown of β1,2-xylosyltransferase and α1,3-fucosyltransferase. Results showed that triantennary Gn[GnGn] and [GnGn]Gn N-glycans could be produced according to the expected activities of the respective enzymes. Combination of the two enzymes by crossing stably transformed GnT-IV and GnT-V plants showed that up to 10% tetraantennary [GnGn][GnGn], 25% triantennary, and 35% biantennary N-glycans were synthesized. All transgenic plants were viable and showed no aberrant phenotype under standard growth conditions.

Receptor binding proteins of Listeria monocytogenes bacteriophages A118 and P35 recognize serovar-specific teichoic acids

Energy Technology Data Exchange (ETDEWEB)

Bielmann, Regula; Habann, Matthias; Eugster, Marcel R. [Institute of Food, Nutrition and Health, ETH Zurich, Schmelzbergstrasse 7, 8092 Zurich (Switzerland); Lurz, Rudi [Max-Planck Institute for Molecular Genetics, 14195 Berlin (Germany); Calendar, Richard [Department of Molecular and Cell Biology, University of California, Berkeley, CA 94720-3202 (United States); Klumpp, Jochen, E-mail: jochen.klumpp@hest.ethz.ch [Institute of Food, Nutrition and Health, ETH Zurich, Schmelzbergstrasse 7, 8092 Zurich (Switzerland); Loessner, Martin J. [Institute of Food, Nutrition and Health, ETH Zurich, Schmelzbergstrasse 7, 8092 Zurich (Switzerland)

2015-03-15

Adsorption of a bacteriophage to the host requires recognition of a cell wall-associated receptor by a receptor binding protein (RBP). This recognition is specific, and high affinity binding is essential for efficient virus attachment. The molecular details of phage adsorption to the Gram-positive cell are poorly understood. We present the first description of receptor binding proteins and a tail tip structure for the siphovirus group infecting Listeria monocytogenes. The host-range determining factors in two phages, A118 and P35 specific for L. monocytogenes serovar 1/2 have been determined. Two proteins were identified as RBPs in phage A118. Rhamnose residues in wall teichoic acids represent the binding ligands for both proteins. In phage P35, protein gp16 could be identified as RBP and the role of both rhamnose and N-acetylglucosamine in phage adsorption was confirmed. Immunogold-labeling and transmission electron microscopy allowed the creation of a topological model of the A118 phage tail. - Highlights: • We present the first description of receptor binding proteins and a tail tip structure for the Siphovirus group infecting Listeria monocytogenes. • The host-range determining factors in two phages, A118 and P35 specific for L. monocytogenes serovar 1/2 have been determined. • Rhamnose residues in wall teichoic acids represent the binding ligands for both receptor binding proteins in phage A118. • Rhamnose and N-acetylglucosamine are required for adsorption of phage P35. • We preset a topological model of the A118 phage tail.

Characterization of a novel ß-galactosidase from Bifidobacterium adolescentis DSM 20083 active towards transgalactooligosaccharides

NARCIS (Netherlands)

Laere, van K.M.J.; Abee, T.; Schols, H.A.; Beldman, G.; Voragen, A.G.J.

2000-01-01

This paper reports on the effects of both reducing and nonreducing transgalactooligosaccharides (TOS) comprising 2 to 8 residues on the growth of Bifidobacterium adolescentis DSM 20083 and on the production of a novel -galactosidase (-Gal II). In cells grown on TOS, in addition to the

EVALUACIÓN DE LA CALIDAD MICROBIOLÓGICA DEL AGUA PARA CONSUMO Y DEL AGUA RESIDUAL EN UNA POBLACIÓN DE BOGOTÁ (COLOMBIA)

OpenAIRE

Venegas B, Camilo; Mercado R, Marcela; Campos, María Claudia

2014-01-01

En Colombia el acceso al agua potable y a sistemas de saneamiento no están garantizados para buena parte de la población, por lo que el consumo de agua contaminada genera enfermedades de origen hídrico. La alternativa más utilizada para el acceso al agua potable es su almacenamiento dentro de las viviendas y la improvisación de sistemas de alcantarillado que generalmente se encuentran a cielo abierto. Objetivo: Evaluar la calidad microbiológica del agua utilizada para consumo y el agua residu...

Calibration of the century, apsim and ndicea models of decomposition and n mineralization of plant residues in the humid tropics

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Alexandre Ferreira do Nascimento

2011-06-01

Full Text Available The aim of this study was to calibrate the CENTURY, APSIM and NDICEA simulation models for estimating decomposition and N mineralization rates of plant organic materials (Arachis pintoi, Calopogonium mucunoides, Stizolobium aterrimum, Stylosanthes guyanensis for 360 days in the Atlantic rainforest bioma of Brazil. The models´ default settings overestimated the decomposition and N-mineralization of plant residues, underlining the fact that the models must be calibrated for use under tropical conditions. For example, the APSIM model simulated the decomposition of the Stizolobium aterrimum and Calopogonium mucunoides residues with an error rate of 37.62 and 48.23 %, respectively, by comparison with the observed data, and was the least accurate model in the absence of calibration. At the default settings, the NDICEA model produced an error rate of 10.46 and 14.46 % and the CENTURY model, 21.42 and 31.84 %, respectively, for Stizolobium aterrimum and Calopogonium mucunoides residue decomposition. After calibration, the models showed a high level of accuracy in estimating decomposition and N- mineralization, with an error rate of less than 20 %. The calibrated NDICEA model showed the highest level of accuracy, followed by the APSIM and CENTURY. All models performed poorly in the first few months of decomposition and N-mineralization, indicating the need of an additional parameter for initial microorganism growth on the residues that would take the effect of leaching due to rainfall into account.

On conditional residual lifetime and conditional inactivity time of k-out-of-n systems

International Nuclear Information System (INIS)

Tavangar, Mahdi; Bairamov, Ismihan

2015-01-01

In designing structures of technical systems, the reliability engineers often deal with the reliability analysis of coherent systems. Coherent system has monotone structure function and all components of the system are relevant. This paper considers some particular models of coherent systems having identical components with independent lifetimes. The main purpose of the paper is to study conditional residual lifetime of coherent system, given that at a fixed time certain number of components have failed but still there are some functioning components. Different aging and stochastic properties of variables connected with the conditional residual lifetimes of the coherent systems are obtained. An expression for the parent distribution in terms of conditional mean residual lifetime is provided. The similar result is obtained for the conditional mean inactivity time of the failed components of coherent system. The conditional mean inactivity time of failed components presents an interest in many engineering applications where the reliability of system structure is important for designing and constructing of systems. Some illustrative examples with given particular distributions are also presented. - Highlights: • Comparisons of conditional residual lifetime of k-out-of-n systems are derived. • The behavior of the coherent system is explored for IHR distributions. • The parent distribution is expressed in terms of conditional MRL and MIT. • Some illustrative examples are given to clarify the results of the paper.

[Migrants from disposable gloves and residual acrylonitrile].

Science.gov (United States)

Wakui, C; Kawamura, Y; Maitani, T

2001-10-01

Disposable gloves made from polyvinyl chloride with and without di(2-ethylhexyl) phthalate (PVC-DEHP, PVC-NP), polyethylene (PE), natural rubber (NR) and nitrile-butadiene rubber (NBR) were investigated with respect to evaporation residue, migrated metals, migrants and residual acrylonitrile. The evaporation residue found in n-heptane was 870-1,300 ppm from PVC-DEHP and PVC-NP, which was due to the plasticizers. Most of the PE gloves had low evaporation residue levels and migrants, except for the glove designated as antibacterial, which released copper and zinc into 4% acetic acid. For the NR and NBR gloves, the evaporation residue found in 4% acetic acid was 29-180 ppm. They also released over 10 ppm of calcium and 6 ppm of zinc into 4% acetic acid, and 1.68-8.37 ppm of zinc di-ethyldithiocarbamate and zinc di-n-butyldithiocarbamate used as vulcanization accelerators into n-heptane. The acrylonitrile content was 0.40-0.94 ppm in NBR gloves.

Estudio y optimización de los sistemas de intercambio de calor en generación termoeléctrica aplicada al aprovechamiento del calor residual

OpenAIRE

Aranguren Garacochea, Patricia

2015-01-01

La presente tesis doctoral estudia el aprovechamiento del calor residual mediante generación termoeléctrica para la obtención de potencia eléctrica generada gracias al efecto Seebeck. Dos son las aproximaciones empleadas, la simulación computacional, empleando variables obtenidas experimentalmente y la experimentación de escenarios reales. Ambas dos han obtenido valores muy prometedores para la generación eléctrica a través de los gases residuales. Con el desarrollo de esta tesis doctoral,...

Common bean growth, N uptake and seed production in sandy loam soil as affected by application of plant residues, nitrogen and irrigation level

International Nuclear Information System (INIS)

Abdallah, A.A.G.

2002-01-01

Field experiment was conducted at the experimental farm, Inshas, atomic energy authority, egypt. Common bean seeds e.v. Nebrasks were cultivated in sandy loan soil using drip irrigation system prepared for this purpose. Two water regimes, i.e., 100% (793.0 m 3 /fed.) and 65% (513.0 m 3 /fed.) of maximum available water were used in main plots. Where in sub plots two fertilizers types were applied i.e., soybean plant residues which contains N 15 labelled as an organic matter without any addition of any fertilizer and nitrogen as chemical fertilizer without using organic matter. The obtained results indicated that, application of plant residues was superior for total seed yield comparing to nitrogen fertilization treatments. This N source with irrigation level of 793.33 m 3 /fed. had a slight increase in total seed yield comparing with (513.0 m 3 /fed.). Irrigation level of 513.0 m 3 /fed. (65% MAW) as well as application of soybean plant residues showed the highest value of water use efficiency. The highest value of N seed percentage was obtained irrigation level with (513.0 m 3 /fed.). Soybean plant residues improved and increased seeds N content, and total seeds protein content. Both N chemical and irrigation level (65% Maw) recorded highest values with N 15 % atom excess. This result has been obtained at two growth stages and seed yield. The same trend of N 15 % atom excess reflected N utilized with both growth stages and seed yield

A residual life prediction model based on the generalized σ -N curved surface

OpenAIRE

Zongwen AN; Xuezong BAI; Jianxiong GAO

2016-01-01

In order to investigate change rule of the residual life of structure under random repeated load, firstly, starting from the statistic meaning of random repeated load, the joint probability density function of maximum stress and minimum stress is derived based on the characteristics of order statistic (maximum order statistic and minimum order statistic); then, based on the equation of generalized σ -N curved surface, considering the influence of load cycles number on fatigue life, a relation...

Comparación de la reglamentación para el manejo de lodos provenientes de agua residual en Argentina, Chile y Colombia

OpenAIRE

Fabián Andrés Ospina López; Alejandra Rodríguez González; Juan Manuel González Guzmán

2017-01-01

El presente artículo presenta resultados de una revisión sobre el manejo y disposición final de lodos generados en las plantas de tratamiento de agua residual, los cuales deben ser sometidos a diferentes tratamientos para ser transformados en biosólidos y lograr determinar su uso sujeto a la clasificación que se presenta en Argentina, Chile y Colombia. Se realizó un análisis comparativo de los diferentes parámetros que se tienen en cuenta en los reglamentos de cada uno de estos países, eviden...

High quality residues from cover crops favor changes in microbial community and enhance C and N sequestration

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Ileana Frasier

2016-04-01

Full Text Available The objective of the study was to evaluate the effect of a change in management on the soil microbial community and C sequestration. We conducted a 3-year field study in La Pampa (Argentina with rotation of sorghum (Sorghum bicolor in zero tillage alternating with rye (Secale cereale and vetch (Vicia villosa ssp. dasycarpa. Soil was sampled once a year at two depths. Soil organic matter fractions, dissolved organic matter, microbial biomass (MBC and community composition (DNA extraction, qPCR, and phospholipid FAME profiles were determined. Litter, aerial- and root biomass were collected and all material was analyzed for C and N. Results showed a rapid response of microbial biomass to a bacterial dominance independent of residue quality. Vetch had the highest diversity index, while the fertilized treatment had the lowest one. Vetch–sorghum rotation with high N mineralization rates and diverse microbial community sequestered more C and N in stable soil organic matter fractions than no-till sorghum alone or with rye, which had lower N turnover rates. These results reaffirm the importance of enhanced soil biodiversity for maintaining soil ecosystem functioning and services. The supply of high amounts of N-rich residues as provided by grass–legume cover crops could fulfill this objective.

Compared cycling in a soil-plant system of pea and barley residue nitrogen

DEFF Research Database (Denmark)

Jensen, E.S.

1996-01-01

Field experiments were carried out on a temperate soil to determine the decline rate, the stabilization in soil organic matter and the plant uptake of N from N-15-labelled crop residues. The fate of N from field pea (Pisum sativum L.) and spring barley (Hordeum vulgare L.) residues was followed...... mineralization of N was highly correlated to the concentrations of soluble C and N and the lignin:N ratio of residues. The contribution of residue-derived N to the inorganic N pool was at its maximum 30 DAI (10-55%) and declined to on average 5% after 3 years of decomposition. Residual organic labelled N...... in the top 10 cm soil declined rapidly during the initial 86 DAI for all residue types. Leaching of soluble organic materials may have contributed to this decline. At 216 DAI 72, 59 and 45% of the barley, mature pea and green pea residue N, respectively, were present in organic N-forms in the topsoil. During...

An assay of the utilization of the residual use of a N fertilizer [(15NH4)2SO4] made by a wheat crop, using an isotope technique

International Nuclear Information System (INIS)

Bujan, A.; Quitegui, M.I.; Quitegui, M.C.; Ghelfi, L.E.P. de; Deybe, D.

1982-01-01

An experimental study was carried out in order to determine the residual use of a N fertilizer made by wheat during a year. Wheat was seeded in plots which had been cropped the year before with inoculated soybean (glycine max), non-inoculated soybean and sorghum (sorghum caffrorum) fertilized with (NH 4 ) 2 SO 4 at two different levels: 20 and 100kg N/ha tagged with 5% excess 15 N and 1% respectively. It was concluded that:1) the % excess 15 N used in the previous crops were sufficient to determine residuality from the N fertilizer. 2)when the previous crop was non-inoculated soybean, the total nitrogen content of the wheat grains was significantly higher than when the previous crop was either inoculated soybean or sorghum. The total N content was significantly higher on the plots fertilized with 100KgN/ha than on those with 20kgN/ha.3) non-inoculated - and inoculated soybeans determined higher wheat grain yields than sorghum as previous crops. Higher wheat grain yields ocurred on the 100kgN/ha fertilized plots. Higher residual N content ocurred on the 100KgN/ha fertilized plots. Non-inoculated soybean determined higher residual N content in grain than inoculated soybean and sorghum; inoculated soybean determined higher content than sorghum. There were no significant differences in residual N content in the plants depending on the previous crop. (Author) [pt

Phase variation of poly-N-acetylglucosamine expression in Staphylococcus aureus.

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Jamie L Brooks

2014-07-01

Full Text Available Polysaccharide intercellular adhesin (PIA, also known as poly-N-acetyl-β-(1-6-glucosamine (PIA/PNAG is an important component of Staphylococcus aureus biofilms and also contributes to resistance to phagocytosis. The proteins IcaA, IcaD, IcaB, and IcaC are encoded within the intercellular adhesin (ica operon and synthesize PIA/PNAG. We discovered a mechanism of phase variation in PIA/PNAG expression that appears to involve slipped-strand mispairing. The process is reversible and RecA-independent, and involves the expansion and contraction of a simple tetranucleotide tandem repeat within icaC. Inactivation of IcaC results in a PIA/PNAG-negative phenotype. A PIA/PNAG-hyperproducing strain gained a fitness advantage in vitro following the icaC mutation and loss of PIA/PNAG production. The mutation was also detected in two clinical isolates, suggesting that under certain conditions, loss of PIA/PNAG production may be advantageous during infection. There was also a survival advantage for an icaC-negative strain harboring intact icaADB genes relative to an isogenic icaADBC deletion mutant. Together, these results suggest that inactivation of icaC is a mode of phase variation for PIA/PNAG expression, that high-level production of PIA/PNAG carries a fitness cost, and that icaADB may contribute to bacterial fitness, by an unknown mechanism, in the absence of an intact icaC gene and PIA/PNAG production.

40 CFR 180.303 - Oxamyl; tolerances for residues.

Science.gov (United States)

2010-07-01

... PROGRAMS TOLERANCES AND EXEMPTIONS FOR PESTICIDE CHEMICAL RESIDUES IN FOOD Specific Tolerances § 180.303... methyl N,N-dimethyl-N-hydroxy-1-thiooxamimidate calculated as oxamyl in or on the following food..., nonbell 5.0 Pineapple 1 Pineapple, process residue 2.0 Pumpkin 2.0 Soybean, seed 0.1 Spearmint, tops 10.0...

Eliminación de sal inorgánica residual producida en la fermentación farmacéutica por nanofiltración y ósmosis inversa: experimento y modelo matemático

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Jesús Mora Molina

2007-05-01

Full Text Available El problema del agua residual con altos contenidos de sal es una importante preocupación de las autoridades medioambientalistas. Los metódos de tratamientos de aguas residuales existentes, tanto municipales como industriales, son incapaces de retener eficientemente los compuestos inorgánicos. En este trabajo se presentan nuevos resultados con membranas de ósmosis inversa (OI y nanofiltración (NF preparadas por las compañías Filmtec y Millipore. Los objetivos principales de esta investigación fueron estos: 1. Encontrar un sistema con alta eficiencia para separar la sal del agua residual generada en el proceso fermentativo farmacéutico y obtener una concentración según lo establecido por la legislación ambiental (concentración de sal: 2500 mg/l, y concentración de los sólidos totales: 1200 mgO2/l; además, que a la planta de tratamiento biológico o directamente al medio ambiente. 2.Determinar la retención de sal demanda química de oxígeno y el flujo del filtrado con sistemas de NF y OI. Asimismo, con base en los datos experimentales, poder describir soluciones similares a las basadas en el modelo de ósmosis a aguas residuales. La temperatura experimental, la presión y el flujo de recirculación fueron mantenidos constantes, en la NF 30°C, 30 bar y 200 l/h, en la OI 30-40°C, 40-50 bar y 300 l/h. En los experimentos de la NF y la OI el factor de concentración fue de Cff = Vaguaori(m3 /Vretenido (m3 = 2,67. Se midieron y se calcularon el flujo del filtrado, la conductividad eléctrica del filtrado, la demanda química de oxígeno y los sólidos totales. En el sistema de OI se obtuvieron los siguientes resultados: contenido de sólidos totales en el agua original 2,06%, en el filtrado, 0,048%; demanda química de oxígeno en el agua original 8750 mg O2/l, en el filtrado 289 mgO2/l. Los resultados demostraron claramente que las membranas de NF investigadas no fueron lo suficientemente eficientes en la retención de sal del agua

Oxidation of myosin by haem proteins generates myosin radicals and protein cross-links

DEFF Research Database (Denmark)

Lametsch, Marianne Lund; Luxford, Catherine; Skibsted, Leif Horsfelt

2008-01-01

of thiyl and tyrosyl radicals is consistent with the observed consumption of cysteine and tyrosine residues, the detection of di-tyrosine by HPLC and the detection of both reducible (disulfide bond) and non-reducible cross-links between myosin molecules by SDS/PAGE. The time course of radical formation...

The conserved residue Arg46 in the N-terminal heptad repeat domain of HIV-1 gp41 is critical for viral fusion and entry.

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Xiaoyi Wang

Full Text Available During the process of HIV-1 fusion with the target cell, the N-terminal heptad repeat (NHR of gp41 interacts with the C-terminal heptad repeat (CHR to form fusogenic six-helix bundle (6-HB core. We previously identified a crucial residue for 6-HB formation and virus entry--Lys63 (K63 in the C-terminal region of NHR (aa 54-70, which forms a hydrophobic cavity. It can form an important salt bridge with Asp121 (D121 in gp41 CHR. Here, we found another important conserved residue for virus fusion and entry, Arg46 (R46, in the N-terminal region of NHR (aa 35-53, which forms a hydrogen bond with a polar residue, Asn43 (N43, in NHR, as a part of the hydrogen-bond network. R46 can also form a salt bridge with a negatively charged residue, Glu137 (E137, in gp41 CHR. Substitution of R46 with the hydrophobic residue Ala (R46A or the negatively charged residue Glu (R46E resulted in disruption of the hydrogen bond network, breakage of the salt bridge and reduction of 6-HB's stability, leading to impairment of viral fusion and decreased inhibition of N36, an NHR peptide. Similarly, CHR peptide C34 with substitution of E137 for Ala (E137A or Arg (E137R also exhibited reduced inhibitory activity against HIV-1 infection and HIV-1-mediated cell-to-cell fusion. These results suggest that the positively charged residue R46 and its hydrogen bond network, together with the salt bridge between R46 and E137, are important for viral fusion and entry and may therefore serve as a target for designing novel HIV fusion/entry inhibitors.

Combinatorial construction of toric residues

OpenAIRE

Khetan, Amit; Soprounov, Ivan

2004-01-01

The toric residue is a map depending on n+1 semi-ample divisors on a complete toric variety of dimension n. It appears in a variety of contexts such as sparse polynomial systems, mirror symmetry, and GKZ hypergeometric functions. In this paper we investigate the problem of finding an explicit element whose toric residue is equal to one. Such an element is shown to exist if and only if the associated polytopes are essential. We reduce the problem to finding a collection of partitions of the la...

Immobilization of Mn and NH4 (+)-N from electrolytic manganese residue waste.

Science.gov (United States)

Chen, Hongliang; Liu, Renlong; Liu, Zuohua; Shu, Jiancheng; Tao, Changyuan

2016-06-01

The objective of this work was the immobilization of soluble manganese (Mn) and ammonium nitrogen (NH4 (+)-N) leached from electrolytic manganese residue (EMR). Immobilization of Mn was investigated via carbonation using carbon dioxide (CO2) and alkaline additives. NH4 (+)-N immobilization was evaluated via struvite precipitation using magnesium and phosphate sources. Results indicated that the immobilization efficiency of Mn using CO2 and quicklime (CaO) was higher than using CO2 and sodium hydroxide (NaOH). This higher efficiency was likely due to the slower release of OH(-) during CaO hydrolysis. The immobilization efficiency of Mn was >99.99 % at the CaO:EMR mass ratio of 0.05:1 for 20-min reaction time. The struvite precipitation of NH4 (+)-N was conducted in the carbonated EMR slurry and the immobilization efficiency was 89 % using MgCl2 · 6H2O + Na3PO4 · 12H2O at the Mg:P:N molar ratio of 1.5:1.5:1 for 90-min reaction time. A leaching test showed that the concentrations of Mn and NH4 (+)-N in the filtrate of the treated EMR were 0.2 and 9 mg/L, respectively. The combined immobilization of Mn and NH4 (+)-N was an effective pretreatment method in the harmless treatment of the EMR.

Production of Complex Multiantennary N-Glycans in Nicotiana benthamiana Plants1[W][OA

Science.gov (United States)

Nagels, Bieke; Van Damme, Els J.M.; Pabst, Martin; Callewaert, Nico; Weterings, Koen

2011-01-01

In recent years, plants have been developed as an alternative expression system to mammalian hosts for the production of therapeutic proteins. Many modifications to the plant glycosylation machinery have been made to render it more human because of the importance of glycosylation for functionality, serum half-life, and the safety profile of the expressed proteins. These modifications include removal of plant-specific β1,2-xylose and core α1,3-fucose, and addition of bisecting N-acetylglucosamine, β1,4-galactoses, and sialic acid residues. Another glycosylation step that is essential for the production of complex human-type glycans is the synthesis of multiantennary structures, which are frequently found on human N-glycans but are not generated by wild-type plants. Here, we report both the magnICON-based transient as well as stable introduction of the α1,3-mannosyl-β1,4-N-acetylglucosaminyltransferase (GnT-IV isozymes a and b) and α1,6-mannosyl-β1,6-N-acetylglucosaminyltransferase (GnT-V) in Nicotiana benthamiana plants. The enzymes were targeted to the Golgi apparatus by fusing their catalytic domains to the plant-specific localization signals of xylosyltransferase and fucosyltransferase. The GnT-IV and -V modifications were tested in the wild-type background, but were also combined with the RNA interference-mediated knockdown of β1,2-xylosyltransferase and α1,3-fucosyltransferase. Results showed that triantennary Gn[GnGn] and [GnGn]Gn N-glycans could be produced according to the expected activities of the respective enzymes. Combination of the two enzymes by crossing stably transformed GnT-IV and GnT-V plants showed that up to 10% tetraantennary [GnGn][GnGn], 25% triantennary, and 35% biantennary N-glycans were synthesized. All transgenic plants were viable and showed no aberrant phenotype under standard growth conditions. PMID:21233332

Protein backbone motions viewed by intraresidue and sequential H{sup N}-H{sup {alpha}} residual dipolar couplings

Energy Technology Data Exchange (ETDEWEB)

Voegeli, Beat; Yao Lishan; Bax, Ad [National Institutes of Health, Laboratory of Chemical Physics, National Institute of Diabetes and Digestive and Kidney Diseases (United States)], E-mail: bax@nih.gov

2008-05-15

Triple resonance E.COSY-based techniques were used to measure intra-residue and sequential H{sup N}-H{sup {alpha}} residual dipolar couplings (RDCs) for the third IgG-binding domain of protein G (GB3), aligned in Pf1 medium. Measurements closely correlate with values predicted on the basis of an NMR structure, previously determined on the basis of a large number of one-bond backbone RDCs measured in five alignment media. However, in particular the sequential H{sup N}-H{sup {alpha}} RDCs are smaller than predicted for a static structure, suggesting a degree of motion for these internuclear vectors that exceeds that of the backbone amide N-H vectors. Of all experimentally determined GB3 structures available, the best correlation between experimental {sup 1}H-{sup 1}H couplings is observed for a GB3 ensemble, previously derived to generate a realistic picture of the conformational space sampled by GB3 (Clore and Schwieters, J Mol Biol 355:879-886, 2006). However, for both NMR and X-ray-derived structures the {sup 1}H-{sup 1}H couplings are found to be systematically smaller than expected on the basis of alignment tensors derived from {sup 15}N-{sup 1}H amide RDCs, assuming librationally corrected N-H bond lengths of 1.041 A.

Determination of ethephon residues in water by gas chromatography with cubic mass spectrometry after ion-exchange purification and derivatisation with N-(tert-butyldimethylsilyl)-N-methyltrifluoroacetamide.

Science.gov (United States)

Royer, A; Laporte, F; Bouchonnet, S; Communal, P-Y

2006-03-03

An analytical method has been developed for the determination of residues of ethephon (2-chloroethyl phosphonic acid) in drinking and surface water. The procedure is based on de-ionisation with an anion/cation-exchange resin, solid phase extraction by means of anion-exchange polystyrene-divinylbenzene extraction disks, elution with a mixture of methanol and 10 M hydrochloric acid (98/2, v/v), redisolution into acetonitrile after evaporation and silylation with N-(tert-butyldimethylsilyl)-N-methyltrifluoroacetamide (MTBSTFA). Quantification is performed by gas chromatography with ion-trap cubic mass spectrometric detection in the electron impact mode (GC-EI-MS3). Method validation was conducted using samples of mineral, tap, and river water that were fortified with ethephon at concentration levels ranging from 0.1 to 1.0 microg/L. The mean recovery from all the fortified samples (n = 36) amounted to 88% with a relative standard deviation of 17%. The method, therefore, was shown to allow accurate determination of ethephon residues in drinking and surface water with a limit of quantification of 0.1 microg/L.

Estudios sobre semilla de Hypochaeris variegata L. (Baker: aceite seminal y harina residual de extracción

Directory of Open Access Journals (Sweden)

Nolasco, S. M.

2000-08-01

Full Text Available Seeds from Hypochaeris variegata L. (Baker harvested at Olavarría (Buenos Aires, Argentine were defatted with hexane and the raw oil obtained with a yield of 24,7% dry basis. The crude oil was examined in their physicochemical characteristics had refractive index of 1,4637 (at 25ºC, iodine value of 125,2, saponification index of 188,4, unsaponifiable matter of 8,5 % and free fatty acid content of 9,7 (mg KOH/g. Gas chromatographic analysis of the oil revealed high levels of linoleic acid (66,2%, appreciable amount of linolenic and erucic acids. The residual seed meal contained 35,49% of crude protein and 35,1% of crude fiber. Total and phytic acid phosphorous, calcium, ash, sugar and polisaccharides (non presence of starch contents are reported.Semillas de Hypochaeris variegata L. (Baker cosechadas en Olavarría (prov. de Buenos Aires, Argentina se extrajeron con hexano (soxhlet obteniéndose el aceite crudo con un rendimiento del 24,7 % (b.s. y la harina residual de extracción. El aceite crudo se examinó en sus características fisicoquímicas (Indice de refracción: 1.4637 (a 25ºC, Indice de iodo: 125,2, Indice de saponificación: 188,4, insaponificable: 8,5%, Indice de acidez: 9,7 (mgKOH/g y composición acídica. El análisis por cromatografía gaseosa de los ésteres metílicos revela un alto porcentaje de ácido linoleico (66,2%, cantidades apreciables de ácido linolénico y erúcico. La harina residual de extracción presentó un 35,49% b.s. de proteína cruda y 35,1% b.s. de fibra cruda. Se informan valores de fósforo total y de ácido fítico, cenizas, calcio e hidratos de carbono.

Modulation of procaspase-7 self-activation by PEST amino acid residues of the N-terminal prodomain and intersubunit linker.

Science.gov (United States)

Alves, Juliano; Garay-Malpartida, Miguel; Occhiucci, João M; Belizário, José E

2017-12-01

Procaspase-7 zymogen polypeptide is composed of a short prodomain, a large subunit (p20), and a small subunit (p10) connected to an intersubunit linker. Caspase-7 is activated by an initiator caspase-8 and -9, or by autocatalysis after specific cleavage at IQAD 198 ↓S located at the intersubunit linker. Previously, we identified that PEST regions made of amino acid residues Pro (P), Glu (E), Asp (D), Ser (S), Thr (T), Asn (N), and Gln (Q) are conserved flanking amino acid residues in the cleavage sites within a prodomain and intersubunit linker of all caspase family members. Here we tested the impact of alanine substitution of PEST amino acid residues on procaspase-7 proteolytic self-activation directly in Escherichia coli. The p20 and p10 subunit cleavage were significantly delayed in double caspase-7 mutants in the prodomain (N18A/P26A) and intersubunit linker (S199A/P201A), compared with the wild-type caspase-7. The S199A/P201A mutants effectively inhibited the p10 small subunit cleavage. However, the mutations did not change the kinetic parameters (k cat /K M ) and optimal tetrapeptide specificity (DEVD) of the purified mutant enzymes. The results suggest a role of PEST-amino acid residues in the molecular mechanism for prodomain and intersubunit cleavage and caspase-7 self-activation.

Initial contents of residue quality parameters predict effects of larger soil fauna on decomposition of contrasting quality residues

Directory of Open Access Journals (Sweden)

Ratikorn Sanghaw

2017-10-01

Full Text Available A 52-week decomposition study employing the soil larger fauna exclusion technique through litter bags of two mesh sizes (20 and 0.135 mm was conducted in a long-term (18 yr field experiment. Organic residues of contrasting quality of N, lignin (L, polyphenols (PP and cellulose (CL all in grams per kilogram: rice straw (RS: 4.5N, 22.2L, 3.9PP, 449CL, groundnut stover (GN: 21.2N, 71.4L, 8.1PP, 361CL, dipterocarp leaf litter (DP: 5.1N, 303L, 68.9PP, 271CL and tamarind leaf litter (TM: 11.6N, 190L, 27.7PP, 212CL were applied to soil annually to assess and predict soil larger fauna effects (LFE on decomposition based on the initial contents of the residue chemical constituents. Mass losses in all residues were not different under soil fauna inclusion and exclusion treatments during the early stage (up to week 4 after residue incorporation but became significantly higher under the inclusion than the exclusion treatments during the later stage (week 8 onwards. LFE were highest (2–51% under the resistant DP at most decomposition stages. During the early stage (weeks 1–4, both the initial contents of labile (N and CL and recalcitrant C, and recalcitrant C interaction with labile constituents of residues showed significant correlations (r = 0.64–0.90 with LFE. In the middle stage (week 16, LFE under resistant DP and TM had significant positive correlations with L, L + PP and L/CL. They were also affected by these quality parameters as shown by the multiple regression analysis. In the later stages (weeks 26–52, the L/CL ratio was the most prominent quality parameter affecting LFE. Keywords: Mesofauna and macrofauna, Microorganisms, Recalcitrant and labile compounds, Residue chemical composition, Tropical sandy soil

Untersuchungen zu mummy, kette und Interaktionspartnern bei der Entwicklung des Drosophila Nervensystems

OpenAIRE

Strunk, J.M. (Judith)

2006-01-01

Die Dissertation beinhaltet genetische, funktionelle und phänotypische Analysen von Mutationen, die zu Defekten der Musterbildung des embryonalen ZNS von Drosophila melanogaster führen. Das Gen mummy wurde im Bereich 26D7 lokalisiert und codiert eine UDP-N-ACETYLGLUCOSAMIN-PYROPHOSPHORYLASE. MUMMY katalysiert eine Reaktion, deren Produkt, das UDP-N-Acetylglucosamin, Grundbaustein für Glycosylierung und GPI-Ankersynthese ist. Effekte von mummy auf diese Prozesse konnten dargestellt werden. Für...

The residual C concentration control for low temperature growth p-type GaN

International Nuclear Information System (INIS)

Liu Shuang-Tao; Zhao De-Gang; Yang Jing; Jiang De-Sheng; Liang Feng; Chen Ping; Zhu Jian-Jun; Liu Zong-Shun; Li Xiang; Liu Wei; Xing Yao; Zhang Li-Qun

2017-01-01

In this work, the influence of C concentration to the performance of low temperature growth p-GaN is studied. Through analyses, we have confirmed that the C impurity has a compensation effect to p-GaN. At the same time we have found that several growth and annealing parameters have influences on the residual C concentration: (i) the C concentration decreases with the increase of growth pressure; (ii) we have found there exists a Ga memory effect when changing the Cp 2 Mg flow which will lead the growth rate and C concentration increase along the increase of Cp 2 Mg flow; (iii) annealing outside of metal–organic chemical vapor deposition (MOCVD) could decrease the C concentration while in situ annealing in MOCVD has an immobilization role to C concentration. (paper)

Characterization of carbohydrate structures of bovine MUC15 and distribution of the mucin in bovine milk

DEFF Research Database (Denmark)

Pallesen, Lone Tjener; Pedersen, Lise Refstrup Linnebjerg; Petersen, Torben Ellebæk

2007-01-01

-containing fractions as well, such as skim milk and whey. Compositional and structural studies of the carbohydrates of bovine milk MUC15 showed that the glycans are composed of fucose, galactose, mannose, N-acetylgalactosamine, N-acetylglycosamine, and sialic acid. The carbohydrate was shown to constitute 65......% of the total molecular weight, and the molar ratios of the individual sugars to protein of the O-linked glycans were determined. The glycan structures of MUC15 were further studied by enzymatic deglycosylation experiments using different endo- and exoglycosidases as well as a panel of lectins. The N......-linked glycans. By comparing the results of peanut agglutinin lectin binding, enzymatic deglycosylation, and monosaccharide composition analysis, we concluded that bovine MUC15 also contains more complex O-glycans containing high amounts N-acetylglucosamine residues. Furthermore, a small subset of the O...

Precipitación de sulfuros metálicos a partir de licor residual ácido: modelos y ecuaciones cinéticas

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Miguel Garrido-Rodríguez

2013-03-01

Full Text Available Con el fin de complementar el estudio termodinámico de la precipitación de sulfuros metálicos en licor residual ácido, la presente investigación tuvo el propósito de obtener los modelos y las ecuaciones cinéticas. Se utilizó para ello la metodología propuesta por Dobrojotov & Rodríguez, la cual, a partir del método gráfico, permite determinar los exponentes empíricos y las ecuaciones y modelos cinéticos que caracterizan de forma particular la influencia de diferentes variables sobre la velocidad del proceso de precipitación y rigen el comportamiento de las distintas especies metálicas. Los modelos y ecuaciones obtenidas establecen la dependencia entre la velocidad del proceso de precipitación de sulfuros en el licor residual ácido de la tecnología de lixiviación ácida a presión y las variables temperatura, velocidad de agitación y concentración de agente precipitante (hidrogenosulfuro de sodio para las especies metálicas cobre, zinc, cobalto y níquel

Glycosaminoglycans from earthworms (Eisenia andrei).

Science.gov (United States)

Im, A-Rang; Park, Youmie; Sim, Joon-Soo; Zhang, Zhenqing; Liu, Zhenling; Linhardt, Robert J; Kim, Yeong Shik

2010-02-01

The whole tissue of the earthworm (Eisenia andrei) was lyophilized and extracted to purify glycosaminoglycans. Fractions, eluting from an anion-exchange column at 1.0 M and 2.0 M NaCl, showed the presence of acidic polysaccharides on agarose gel electrophoresis. Monosaccharide compositional analysis showed that galactose and glucose were most abundant monosaccharides in both fractions. Depolymerization of the polysaccharide mixture with glycosaminoglycan-degrading enzymes confirmed the presence of chondroitin sulfate/dermatan sulfate and heparan sulfate in the 2.0 M NaCl fraction. The content of GAGs (uronic acid containing polysaccharide) in the 2.0 M NaCl fraction determined by carbazole assay was 2%. Disaccharide compositional analysis using liquid chromatography-electrospray ionization mass spectrometry (LC-ESI-MS) analysis after chondroitinase digestion (ABC and ACII), showed that the chondroitin sulfate/dermatan sulfate contained a 4-O-sulfo (76%), 2,4-di-O-sulfo (15%), 6-O-sulfo (6%), and unsulfated (4%) uronic acid linked N-acetylgalactosamine residues. LC-ESI-MS analysis of heparin lyase I/II/III digests demonstrated the presence of N-sulfo (69%), N-sulfo-6-O-sulfo (25%) and 2-O-sulfo-N-sulfo-6-O-sulfo (5%) uronic acid linked N-acetylglucosamine residues.

Mitigating N2O emissions from clover residues by 3,4-dimethylpyrazole phosphate (DMPP) without adverse effects on the earthworm Lumbricus terrestris

DEFF Research Database (Denmark)

Kong, Xianwang; Duan, YunFeng; Schramm, Andreas

2017-01-01

in a 28-d mesocosm experiment, where DMPP spraying prior to tillage was simulated. Above-ground parts of 15N-labelled clover residues were treated with DMPP and either placed at 10 cm depth to simulate ploughing (PL), or mixed with soil at 0–10 cm depth to simulate rotovation (RO). Earthworms (Lumbricus...... terrestris) were introduced to study their role in residue decomposition and N2O emissions. Fluxes and isotopic composition of N2O were determined with dynamic chambers using laser spectroscopy. A gradual increase in 15N-enrichment of N2O indicated that denitrification was the main source. DMPP reduced...... cumulative N2O emissions in PL from 241 to 146 mg N m−2; the reduction in RO was smaller, from 103 to 94 mg N m−2, and not significant, possibly due to higher oxygen and soil NO3− availability. After 28 d incubation, on average > 90% of the earthworms were recovered, and in vivo N2O production from L...

Comparative glycopattern analysis of mucins in the Brunner's glands of the guinea-pig and the house mouse (Rodentia).

Science.gov (United States)

Scillitani, Giovanni; Mentino, Donatella

2015-09-01

The mucins secreted by the Brunner's glands and the duodenal goblet cells of the Guinea-pig and the house mouse were compared by conventional and FITC-conjugated lectin histochemistry. Methylation/saponification and sialidase digestion were performed prior to lectin binding to detect the residues subterminal to sulfated groups and sialic acid, respectively. In the Guinea-pig the Brunner's glands produce class-III stable sulfosialomucins. Sialic acid is mostly 2,6-linked to galactose or to N-acetylgalactosamine and is in part O-acetylated in C7, C8, and C9. Sulfated groups are probably linked to sialic acid and N-acetylgalactosamine. Terminal residuals of N-acetylglucosamine, galactose, N-acetylgalactosamine and fucose linked in α1,2, α1,3, and α1,4 are also present. Duodenal goblet cells of the Guinea-pig present a lower number of residuals in respect to the Brunner's glandular ones, with sialic acid and N-acetylgalactosamine subterminal to sulfated groups. In the house mouse the Brunner's glands produce class-III stable neutral mucins, binding to same lectins as in the Guinea-pig except for those specific to sialic acid. A diversity of fucosylated residuals higher than in the Guinea-pig is observed. The mouse duodenal goblet cells lack stable class-III mucins, have little sialic acid and present a lower number of residuals in respect to the correspondent Brunner's glands. Regulation of the acidic intestinal microenvironment, prevention of pathologies and hosting of microflora can explain the observed results and the differences observed between the two rodents. Copyright © 2015 Elsevier GmbH. All rights reserved.

Evaluation and optimization of nutritional and environmental impact of biogas residues

International Nuclear Information System (INIS)

Lichti, Fabian Heribert

2013-01-01

On the basis of the dynamic growth of biogas plants in Germany the fertilization with biogas residues has obtained an important role for recirculation of plant nutrients, particularly with regard to nitrogen. In this work the effect of N nutrition with biogas residues was assessed in a 3-year on-field trial conducted at four sites throughout Bavaria. The fertilizing effects were tested by varying rate and time of biogas residues application, using different application techniques and the addition of nitrification inhibitors on several crops. The biogas residues achieved mineral fertilizer equivalents of 30 - 45 %. Overall, the untreated biogas residues showed a slightly increased N efficiency compared to cattle manure, whereas particularly site-dependent differences resulted in large differences in N efficiency of biogas residues.

An N-Glycosidase from Escherichia coli That Releases Free Uracil from DNA Containing Deaminated Cytosine Residues

Science.gov (United States)

Lindahl, Tomas

1974-01-01

An enzyme that liberates uracil from single-stranded and double-stranded DNA containing deaminated cytosine residues and from deoxycytidylate-deoxyuridylate copolymers in the absence of Mg++ has been purified 30-fold from cell extracts of E. coli. The enzyme does not release uracil from deoxyuridine, dUMP, uridine, or RNA, nor does it liberate the normally occurring pyrimidine bases, cytosine and thymine, from DNA. The enzymatic cleavage of N-glycosidic bonds in DNA occurs without concomitant cleavage of phosphodiester bonds, resulting in the formation of free uracil and DNA strands of unaltered chain length that contain apyrimidinic sites as reaction products. The enzyme may be active in DNA repair, converting deaminated dCMP residues to an easily repairable form. PMID:4610583

N-terminal aliphatic residues dictate the structure, stability, assembly, and small molecule binding of the coiled-coil region of cartilage oligomeric matrix protein.

Science.gov (United States)

Gunasekar, Susheel K; Asnani, Mukta; Limbad, Chandani; Haghpanah, Jennifer S; Hom, Wendy; Barra, Hanna; Nanda, Soumya; Lu, Min; Montclare, Jin Kim

2009-09-15

The coiled-coil domain of cartilage oligomeric matrix protein (COMPcc) assembles into a homopentamer that naturally recognizes the small molecule 1,25-dihydroxyvitamin D(3) (vit D). To identify the residues critical for the structure, stability, oligomerization, and binding to vit D as well as two other small molecules, all-trans-retinol (ATR) and curcumin (CCM), here we perform an alanine scanning mutagenesis study. Ten residues lining the hydrophobic pocket of COMPcc were mutated into alanine; of the mutated residues, the N-terminal aliphatic residues L37, L44, V47, and L51 are responsible for maintaining the structure and function. Furthermore, two polar residues, T40 and Q54, within the N-terminal region when converted into alanine improve the alpha-helical structure, stability, and self-assembly behavior. Helical stability, oligomerization, and binding appear to be linked in a manner in which mutations that abolish helical structure and assembly bind poorly to vit D, ATR, and CCM. These results provide not only insight into COMPcc and its functional role but also useful guidelines for the design of stable, pentameric coiled-coils capable of selectively storing and delivering various small molecules.

Ammonia volatilization from crop residues and frozen green manure crops

Science.gov (United States)

de Ruijter, F. J.; Huijsmans, J. F. M.; Rutgers, B.

2010-09-01

Agricultural systems can lose substantial amounts of nitrogen (N). To protect the environment, the European Union (EU) has adopted several directives that set goals to limit N losses. National Emission Ceilings (NEC) are prescribed in the NEC directive for nitrogen oxides and ammonia. Crop residues may contribute to ammonia volatilization, but sufficient information on their contribution to the national ammonia volatilization is lacking. Experiments were carried out with the aim to assess the ammonia volatilization of crop residues left on the soil surface or incorporated into the soil under the conditions met in practice in the Netherlands during late autumn and winter. Ammonia emission from residues of broccoli, leek, sugar beet, cut grass, fodder radish (fresh and frozen) and yellow mustard (frozen) was studied during two winter seasons using volatilization chambers. Residues were either placed on top of soil or mixed with soil. Mixing residues with soil gave insignificant ammonia volatilization, whereas volatilization was 5-16 percent of the N content of residues when placed on top of soil. Ammonia volatilization started after at least 4 days. Total ammonia volatilization was related to C/N-ratio and N concentration of the plant material. After 37 days, cumulative ammonia volatilization was negligible from plant material with N concentration below 2 percent, and was 10 percent of the N content of plant material with 4 percent N. These observations can be explained by decomposition of plant material by micro-organisms. After an initial built up of the microbial population, NH 4+ that is not needed for their own growth is released and can easily emit as NH 3 at the soil surface. The results of the experiments were used to estimate the contribution of crop residues to ammonia volatilization in the Netherlands. Crop residues of arable crops and residues of pasture topping may contribute more than 3 million kg NH 3-N to the national ammonia volatilization of the

Mutational analysis to identify the residues essential for the inhibition of N-acetyl glutamate kinase of Corynebacterium glutamicum.

Science.gov (United States)

Huang, Yuanyuan; Zhang, Hao; Tian, Hongming; Li, Cheng; Han, Shuangyan; Lin, Ying; Zheng, Suiping

2015-09-01

N-acetyl glutamate kinase (NAGK) is a key enzyme in the synthesis of L-arginine that is inhibited by its end product L-arginine in Corynebacterium glutamicum (C. glutamicum). In this study, the potential binding sites of arginine and the residues essential for its inhibition were identified by homology modeling, inhibitor docking, and site-directed mutagenesis. The allosteric inhibition of NAGK was successfully alleviated by a mutation, as determined through analysis of mutant enzymes, which were overexpressed in vivo in C. glutamicum ATCC14067. Analysis of the mutant enzymes and docking analysis demonstrated that residue W23 positions an arginine molecule, and the interaction between arginine and residues L282, L283, and T284 may play an important role in the remote inhibitory process. Based on the results of the docking analysis of the effective mutants, we propose a linkage mechanism for the remote allosteric regulation of NAGK activity, in which residue R209 may play an essential role. In this study, the structure of the arginine-binding site of C. glutamicum NAGK (CgNAGK) was successfully predicted and the roles of the relevant residues were identified, providing new insight into the allosteric regulation of CgNAGK activity and a solid platform for the future construction of an optimized L-arginine producing strain.

Weed management practice and cropping sequence impact on soil residual nitrogen

Science.gov (United States)

Inefficient N uptake by crops from N fertilization and/or N mineralized from crop residue and soil organic matter results in the accumulation of soil residual N (NH4-N and NO3-N) which increases the potential for N leaching. The objective of this study was to evaluate the effects of weed management ...

Residual nitrogen-15 recovery by corn as influenced by tillage and fertilization method

International Nuclear Information System (INIS)

Timmons, D.R.; Cruse, R.M.

1991-01-01

Tillage systems that create different surface residue conditions may also affect the recovery of residual fertilizer N during subsequent growing seasons. This study evaluated the recovery of residual labeled N fertilizer in the soil by corn (Zea mays L.) for two tillage systems and two fertilization methods. Five atom % 15 N-enriched 28% urea-ammonium nitrate solution (UAN) at 224 kg N ha -1 was either surface-applied in the fall before any primary tillage or banded (knifed in) just before planting in the spring. Continuous corn was grown with either fall moldboard-plow (MP) or ridge-till (RT) systems. After the initial growing season, the recovery of residual labeled N in the soil by corn was determined for three consecutive growing seasons, and the soil profile was sampled periodically to measure residual 15 N in the organic and inorganic pools. One year after labeled UAN application, from 16 to 27% of the initial 15 N applied was found in the organic N pool and only 1% as inorganic N[NH 4 +(NO 2 +NO 3 )-N]. After four seasons, residual 15 N in the organic N pool ranged from 13 to 24%. Less than 0.5% remained as inorganic N. Regression analyses indicated that about 5 kg 15 N ha -1 year -1 became available for both MP and RT systems with banded N, so the amounts were small. Total residual 15 N recovery by corn grain plus stover for three seasons ranged from 1.7 to 3.5%, and was greatest for spring-banded fertilizer. Because the amounts of residual 15 N utilized were too small to affect corn growth, this N source appears to be negligible when considering corn-N needs

Rapid Mass Spectrometric Analysis of a Novel Fucoidan, Extracted from the Brown Alga Coccophora langsdorfii

Directory of Open Access Journals (Sweden)

Stanislav D. Anastyuk

2014-01-01

Full Text Available The novel highly sulfated (35% fucoidan fraction Cf2 , which contained, along with fucose, galactose and traces of xylose and uronic acids was purified from the brown alga Coccophora langsdorfii. Its structural features were predominantly determined (in comparison with fragments of known structure by a rapid mass spectrometric investigation of the low-molecular-weight fragments, obtained by “mild” (5 mg/mL and “exhaustive” (maximal concentration autohydrolysis. Tandem matrix-assisted laser desorption/ionization mass spectra (MALDI-TOF/TOFMS of fucooligosaccharides with even degree of polymerization (DP, obtained by “mild” autohydrolysis, were the same as that observed for fucoidan from Fucus evanescens, which have a backbone of alternating (1 → 3- and (1 → 4 linked sulfated at C-2 and sometimes at C-4 of 3-linked α-L-Fucp residues. Fragmentation patterns of oligosaccharides with odd DP indicated sulfation at C-2 and at C-4 of (1 → 3 linked α-L-Fucp residues on the reducing terminus. Minor sulfation at C-3 was also suggested. The “exhaustive” autohydrolysis allowed us to observe the “mixed” oligosaccharides, built up of fucose/xylose and fucose/galactose. Xylose residues were found to occupy both the reducing and nonreducing termini of FucXyl disaccharides. Nonreducing galactose residues as part of GalFuc disaccharides were found to be linked, possibly, by 2-type of linkage to fucose residues and were found to be sulfated, most likely, at position C-2.

Multi-Seasonal Nitrogen Recoveries from Crop Residue in Soil and Crop in a Temperate Agro-Ecosystem.

Science.gov (United States)

Hu, Guoqing; Liu, Xiao; He, Hongbo; Zhang, Wei; Xie, Hongtu; Wu, Yeye; Cui, Jiehua; Sun, Ci; Zhang, Xudong

2015-01-01

In conservation tillage systems, at least 30% of the soil surface was covered by crop residues which generally contain significant amounts of nitrogen (N). However, little is known about the multi-seasonal recoveries of the N derived from these crop residues in soil-crop systems, notably in northeastern China. In a temperate agro-ecosystem, 15N-labeled maize residue was applied to field surfaces in the 1st year (2009). From the 2nd to 4th year (2010-2012), one treatment halted the application of maize residue, whereas the soil in the second treatment was re-applied with unlabeled maize residue. Crop and soil samples were collected after each harvest, and their 15N enrichments were determined on an isotope ratio mass spectrometer to trace the allocation of N derived from the initially applied maize residue in the soil-crop systems. On average, 8.4% of the maize residue N was recovered in the soil-crop in the 1st year, and the vast majority (61.9%-91.9%) was recovered during subsequent years. Throughout the experiment, the cumulative recovery of the residue N in the crop increased gradually (18.2%-20.9%), but most of the residue N was retained in the soil, notably in the 0-10 cm soil layer. Compared to the single application, the sequential residue application significantly increased the recovery of the residue N in the soil profile (73.8% vs. 40.9%) and remarkably decreased the total and the initially applied residue derived mineral N along the soil profile. Our results suggested that the residue N was actively involved in N cycling, and its release and recovery in crop and soil profile were controlled by the decomposition process. Sequential residue application significantly enhanced the retention and stabilization of the initially applied residue N in the soil and retarded its translocation along the soil profile.

Non-enzymatic N -acetylation of Lysine Residues by AcetylCoA Often Occurs via a Proximal S -acetylated Thiol Intermediate Sensitive to Glyoxalase II

OpenAIRE

James, Andrew M.; Hoogewijs, Kurt; Logan, Angela; Hall, Andrew R.; Ding, Shujing; Fearnley, Ian M.; Murphy, Michael P.

2017-01-01

Summary: Acetyl coenzyme A (AcCoA), a key intermediate in mitochondrial metabolism, N-acetylates lysine residues, disrupting and, in some cases, regulating protein function. The mitochondrial lysine deacetylase Sirtuin 3 (Sirt3) reverses this modification with benefits reported in diabetes, obesity, and aging. We show that non-enzymatic lysine N-acetylation by AcCoA is greatly enhanced by initial acetylation of a cysteine residue, followed by SN-transfer of the acetyl moiety to a nearby lysin...

Identification of galactose as the immunodominant sugar of leishmanial excreted factor and subsequent labeling with galactose oxidase and sodium boro[3H]hydride.

Science.gov (United States)

Slutzky, G M; Greenblatt, C L

1982-01-01

Inhibition by low-molecular-weight sugars of precipitin line formation between a polysaccharide (EF) excreted by Leishmania tropica subsp. major, Leishmania enriettii, and rabbit antileishmanial antibodies on double gel diffusion plates revealed that galactose residues, possibly as components of lactosyl groups, were the critical immunodominant sugars mediating antibody recognition of EF. The galactose residues of the EF of L. tropica subsp. major were specifically labeled with tritium via galactose oxidase and sodium boro[3H]hydride. The radioactive EF had an apparent molecular weight of about 85,000 on sodium dodecyl sulfate-polyacrylamide gels and was precipitated by antileishmanial antibodies as well as Ricinus communis lectins I and II (galactose specific). Lectins specific for glucose-mannose residues, fucose, N-acetylglucosamine, and N-acetylgalactosamine did not precipitate the labeled EF. Treatment of [3H]EF with proteolytic (trypsin, papain, protease) or glycosidic (alpha-amylase, beta-galactosidase) enzymes had no effect on either the electrophoretic pattern of the material or on its recognition by antileishmanial antibodies or R. communis lectin. This resistance to enzyme activity suggests that EF may be a useful marker for the presence of the parasite in vivo if it can be detected in minute quantities. PMID:6179874

Thermal Synthesis of Polypeptides from N-Butyloxycarbonyl Oligopeptides Containing Aspartyl Residue at C-Terminus

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Toratane Munegumi

2017-01-01

Full Text Available The thermal reactions of amino acids have been investigated for pure organic synthesis, materials preparation in industry, and prebiotic chemistry. N-t-Butyloxycarbonyl aspartic acid (Boc-Asp releases 2-butene and carbon dioxide upon heating without solvents. The resulting mixture of the free molten aspartic acid was dehydrated to give peptide bonds. This study describes the thermal reactions of N-t-butyloxycarbonyl peptides (Boc-Gly-L-Asp, Boc-L-Ala-L-Asp, Boc-L-Val-L-Asp, and Boc-Gly-Gly-L-Asp having an aspartic residue at the carboxyl terminus. The peptides were deprotected upon heating at a constant temperature between 110 and 170°C for 1 to 24 h to afford polypeptides in which the average molecular weight reached 7800.

Residual Activity Correction in Quantitative Myocardial Perfusion N-13-Ammonia PET Imaging : A Study in Post-MI Patients

NARCIS (Netherlands)

Markousis-Mavrogenis, George; Juarez-Orozco, Luis Eduardo; Alexanderson, Erick

2017-01-01

Background/Introduction/Aim: Positron emission tomography (PET) is the gold standard for the quantification of myocardial blood flow (MBF). A standard PET scan is acquired in two phases (rest and pharmacological stress). N-13-ammonia is a perfusion radiotracer that may show residual activity, which

Cross regulation between mTOR signaling and O-GlcNAcylation.

Science.gov (United States)

Very, Ninon; Steenackers, Agata; Dubuquoy, Caroline; Vermuse, Jeanne; Dubuquoy, Laurent; Lefebvre, Tony; El Yazidi-Belkoura, Ikram

2018-06-01

The hexosamine biosynthetic pathway (HBP) integrates glucose, amino acids, fatty acids and nucleotides metabolisms for uridine diphosphate N-acetylglucosamine (UDP-GlcNAc) synthesis. UDP-GlcNAc is the nucleotide sugar donor for O-linked β-N-acetylglucosaminylation (O-GlcNAcylation) processes. O-GlcNAc transferase (OGT) is the enzyme which transfers the N-acetylglucosamine (O-GlcNAc) residue onto target proteins. Several studies previously showed that glucose metabolism dysregulations associated with obesity, diabetes or cancer correlated with an increase of OGT expression and global O-GlcNAcylation levels. Moreover, these diseases present an increased activation of the nutrient sensing mammalian target of rapamycin (mTOR) pathway. Other works demonstrate that mTOR regulates protein O-GlcNAcylation in cancer cells through stabilization of OGT. In this context, we studied the cross-talk between these two metabolic sensors in vivo in obese mice predisposed to diabetes and in vitro in normal and colon cancer cells. We report that levels of OGT and O-GlcNAcylation are increased in obese mice colon tissues and colon cancer cells and are associated with a higher activation of mTOR signaling. In parallel, treatments with mTOR regulators modulate OGT and O-GlcNAcylation levels in both normal and colon cancer cells. However, deregulation of O-GlcNAcylation affects mTOR signaling activation only in cancer cells. Thus, a crosstalk exists between O-GlcNAcylation and mTOR signaling in contexts of metabolism dysregulation associated to obesity or cancer.

Uso de los residuos sólidos mineros de la extracción del níquel como estimulantes para la producción de biogás. // Use of the nickel solid mining residuals as stimulants for the biogasproduction.

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I. Pereda Reyes

2007-01-01

Full Text Available La adición de diferentes materiales con vistas a mejorar el proceso anaerobio ha venido incrementándose en los últimostiempos existiendo bases teóricas bien fundamentadas para la realización de esta práctica. Este proceso biológico, requiereno sólo de macronutrientes (N, P, K, S, elementos vitales para el desarrollo de los microorganismos y que deben estarpresentes en grandes cantidades, sino también de los denominados micronutrientes y factores estimulantes al proceso, loscuales en cantidades muy pequeñas (trazas, son esenciales para el óptimo desarrollo de los microorganismos, como es elcaso de algunos metales obligatorios (Fe, Ni y Co.En este trabajo se presenta un estudio preliminar del efecto de la adición de residuales mineros cubanos como catalizadoresdel proceso anaerobio. Se realizó la caracterización de dicho residual minero (Cola, empleado en los ensayosexperimentales. Se demostró que la Cola SI aporta nutrientes esenciales al proceso de depuración anaerobia de aguasresiduales. Hubo mayor efectividad en condiciones extremas: poco sustrato y concentraciones tóxicas de Nitrógeno yAzufre, y en cualquiera de las variantes analizadas, la mejor respuesta se obtuvo con una concentración de Cola igual a 3mg/L, con una eliminación de materia orgánica de más del 80%.Palabras claves: Digestión anaerobia, biogás, traza de metales, residuo minero.________________________________________________________________________________Abstract.The addition of several compounds in order to improve anaerobic process has been increased during last decades, beingwell-sustained by theoretical bases. This biological process requires not only macronutrients (N, P, K, S, essentialelements in large quantities for microorganisms well developments, but also those known as micronutrients and stimulatingelements which in a very small concentrations are of vital importance for the optimum microorganism development, as thecase of obligatory metals

Residue behaviour of N-contained polymers and their uptake by plants

International Nuclear Information System (INIS)

Sotiriou, N.

1981-01-01

A series of synthetic, organic N-fertilizers with long-term N-fertilization effect, such as condensation products of urea and formaldehyde, croton aldehyde or isobutyl aldehyde, as well as pelleted fertilizer salts have been developed. An attempt was made to determine whether these kind of polymers can be decomposed under freeland conditions with the help of 14 C-labelled substances. The UF polymers investigated had a positive influence on the produce over a period of 6 test years following a single application. Whereas urea was fully decomposed in the year of application, the UF polymers applied remained unchanged in the first four test years at the applied site. A significant decomposition in the soil was observed in UF 2 polymers as from the 5th test year, in the UF 3 polymers a small reduction in the 6th test year observed. The total N concentration of the test soils was analogous to the measured 14 C residues. A significant increase of its proportion in the soil was seen by using UF polymers. Measurable radioactivity in the plant samples showed that certain plant uptakable products of the polymers investigated already existed in the soil, which were taken up by the plants. This contribution however, is relatively insignificant compared to the application under the present test conditions. (orig./MG) [de

Multi-Seasonal Nitrogen Recoveries from Crop Residue in Soil and Crop in a Temperate Agro-Ecosystem.

Directory of Open Access Journals (Sweden)

Guoqing Hu

Full Text Available In conservation tillage systems, at least 30% of the soil surface was covered by crop residues which generally contain significant amounts of nitrogen (N. However, little is known about the multi-seasonal recoveries of the N derived from these crop residues in soil-crop systems, notably in northeastern China. In a temperate agro-ecosystem, 15N-labeled maize residue was applied to field surfaces in the 1st year (2009. From the 2nd to 4th year (2010-2012, one treatment halted the application of maize residue, whereas the soil in the second treatment was re-applied with unlabeled maize residue. Crop and soil samples were collected after each harvest, and their 15N enrichments were determined on an isotope ratio mass spectrometer to trace the allocation of N derived from the initially applied maize residue in the soil-crop systems. On average, 8.4% of the maize residue N was recovered in the soil-crop in the 1st year, and the vast majority (61.9%-91.9% was recovered during subsequent years. Throughout the experiment, the cumulative recovery of the residue N in the crop increased gradually (18.2%-20.9%, but most of the residue N was retained in the soil, notably in the 0-10 cm soil layer. Compared to the single application, the sequential residue application significantly increased the recovery of the residue N in the soil profile (73.8% vs. 40.9% and remarkably decreased the total and the initially applied residue derived mineral N along the soil profile. Our results suggested that the residue N was actively involved in N cycling, and its release and recovery in crop and soil profile were controlled by the decomposition process. Sequential residue application significantly enhanced the retention and stabilization of the initially applied residue N in the soil and retarded its translocation along the soil profile.

Non-enzymatic N-acetylation of Lysine Residues by AcetylCoA Often Occurs via a Proximal S-acetylated Thiol Intermediate Sensitive to Glyoxalase II

Directory of Open Access Journals (Sweden)

Andrew M. James

2017-02-01

Full Text Available Summary: Acetyl coenzyme A (AcCoA, a key intermediate in mitochondrial metabolism, N-acetylates lysine residues, disrupting and, in some cases, regulating protein function. The mitochondrial lysine deacetylase Sirtuin 3 (Sirt3 reverses this modification with benefits reported in diabetes, obesity, and aging. We show that non-enzymatic lysine N-acetylation by AcCoA is greatly enhanced by initial acetylation of a cysteine residue, followed by SN-transfer of the acetyl moiety to a nearby lysine on mitochondrial proteins and synthetic peptides. The frequent occurrence of an S-acetyl intermediate before lysine N-acetylation suggests that proximity to a thioester is a key determinant of lysine susceptibility to acetylation. The thioesterase glyoxalase II (Glo2 can limit protein S-acetylation, thereby preventing subsequent lysine N-acetylation. This suggests that the hitherto obscure role of Glo2 in mitochondria is to act upstream of Sirt3 in minimizing protein N-acetylation, thus limiting protein dysfunction when AcCoA accumulates. : James et al. show that the non-enzymatic N-acetylation of lysine residues in mitochondrial proteins frequently occurs via a proximal S-acetylated thiol intermediate. Glutathione equilibrates with this intermediate, allowing the thioesterase glyoxalase II to limit protein lysine N-acetylation. These findings expand our understanding of how protein acetylation arises. Keywords: AcetylCoA, lysine acetylation, glyoxalase

Unusual chemical properties of N-terminal histidine residues of glucagon and vasoactive intestinal peptide

International Nuclear Information System (INIS)

Hefford, M.A.; Evans, R.M.; Oda, G.; Kaplan, H.

1985-01-01

An N-terminal histidine residue of a protein or peptide has two functional groups, viz., an alpha-amino group and an imidazole group. A new procedure, based on the competitive labeling approach described by Duggleby and Kaplan has been developed by which the chemical reactivity of each functional group in such a residue can be determined as a function of pH. Only very small amounts of material are required, which makes it possible to determine the chemical properties in dilute solution or in proteins and polypeptides that can be obtained in only minute quantities. With this approach, the reactivity of the alpha-amino group of histidylglycine toward 1-fluoro-2,4-dinitrobenzene gave an apparent pK /sub a/ value of 7.64 +/- 0.07 at 37 degrees C, in good agreement with a value of 7.69 +/- 0.02 obtained by acid-base titration. However, the reactivity of the imidazole function gave an apparent pK /sub a/ value of 7.16 +/- 0.07 as compared to the pK /sub a/ value of 5.85 +/- 0.01 obtained by acid-base titration. Similarly, in glucagon and vasoactive intestinal peptide (VIP), apparent pKa values of 7.60 +/- 0.04 and 7.88 +/- 0.18, respectively, were obtained for the alpha-amino of their N-terminal histidine, and pKa values of 7.43 +/- 0.09 and 7.59 +/- 0.18 were obtained for the imidazole function

Solidification process for sludge residue

International Nuclear Information System (INIS)

Pearce, K.L.

1998-01-01

This report investigates the solidification process used at 100-N Basin to solidify the N Basin sediment and assesses the N Basin process for application to the K Basin sludge residue material. This report also includes a discussion of a solidification process for stabilizing filters. The solidified matrix must be compatible with the Environmental Remediation Disposal Facility acceptance criteria

Influx of CO2 from Soil Incubated Organic Residues at Constant Temperature

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Shoukat Ali Abro

2016-06-01

Full Text Available Temperature induced CO2 from genotypic residue substances is still less understood. Two types of organic residues (wheat- maize were incubated at a constant temperature (25°C to determine the rate and cumulative influx of CO2 in laboratory experiment for 40 days. Further, the effect of surface and incorporated crop residues with and without phosphorus addition was also studied. Results revealed that mixing of crop residues increased CO2-C evolution significantly & emission rare was 37% higher than that of control. At constant temperature, soil mixed residues, had higher emission rates CO2-C than the residues superimposed. There was linear correlation of CO2-C influxed for phosphorus levels and residue application ways with entire incubation at constant temperature. The mixing of organic residues to soil enhanced SOC levels and biomass of microbially bound N; however to little degree ammonium (NH4-N and nitrate NO3-N nitrogen were decreased.

Acetyl coenzyme A: alpha-glucosaminide N-acetyltransferase. Evidence for a transmembrane acetylation mechanism

International Nuclear Information System (INIS)

Bame, K.J.; Rome, L.H.

1985-01-01

The lysosomal membrane enzyme acetyl-CoA: alpha-glucosaminide N-acetyltransferase catalyzes the transfer of an acetyl group from acetyl-CoA to terminal alpha-linked glucosamine residues of heparan sulfate. The reaction mechanism was examined using highly purified lysosomal membranes from rat liver. The reaction was followed by measuring the acetylation of a monosaccharide acetyl acceptor, glucosamine. The enzyme reaction was optimal above pH 5.5, and a 2-3-fold stimulation of activity was observed when the membranes were assayed in the presence of 0.1% taurodeoxycholate. Double reciprocal analysis and product inhibition studies indicated that the enzyme works by a Di-Iso Ping Pong Bi Bi mechanism. Further evidence to support this mechanism was provided by characterization of the enzyme half-reactions. Membranes incubated with acetyl-CoA and [ 3 H]CoA were found to produce acetyl-[ 3 H]CoA. This exchange was optimal at pH values above 7.0. Treating membranes with [ 3 H] acetyl-CoA resulted in the formation of an acetyl-enzyme intermediate. The acetyl group could then be transferred to glucosamine, forming [ 3 H]N-acetylglucosamine. The transfer of the acetyl group from the enzyme to glucosamine was optimal between pH 4 and 5. The results suggest that acetyl-CoA does not cross the lysosomal membrane. Instead, the enzyme is acetylated on the cytoplasmic side of the lysosome and the acetyl group is then transferred to the inside where it is used to acetylate heparan sulfate

Interactions between residue placement and earthworm ecological strategy affect aggregate turnover and N2O dynamics in agricultural soil

NARCIS (Netherlands)

Giannopoulos, G.; Pulleman, M.M.; Groenigen, van J.W.

2010-01-01

Previous laboratory studies using epigeic and anecic earthworms have shown that earthworm activity can considerably increase nitrous oxide (N2O) emissions from crop residues in soils. However, the universality of this effect across earthworm functional groups and its underlying mechanisms remain

Characterization of oligosaccharide structures on a chimeric respiratory syncytial virus protein expressed in insect cell line Sf9

International Nuclear Information System (INIS)

Wathen, M.W.; Aeed, P.A.; Elhammer, A.P.

1991-01-01

The oligosaccharide structures added to a chimeric protein (FG) composed of the extracellular domains of respiratory syncytial virus F and G proteins, expressed in the insect cell line Sf9, were investigated. Cells were labeled in vivo with [ 3 H]glucosamine and infected wit a recombinant baculovirus containing the FG gene. The secreted chimeric protein was isolated by immunoprecipitation and subjected to oligosaccharide analysis. The FG protein contains two types of O-linked oligosaccharides: GalNAc and Galβ1-3GalNAc constituting 17 and 66% of the total number of structures respectively. Only one type of N-linked oligosaccharide, constituting the remaining 17% of the structures on FG, was detected: a trimannosyl core structure with a fucose residue linked α1-6 to the asparagine-linked N-acetylglucosamine

Evaluación del tratamiento biológico para remoción de color índigo de agua residual industrial textil por un consorcio microbiano en lecho fluidizado

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Quintero1 Luz

2012-05-01

Full Text Available El recurso hídrico ha sido uno de los más afectados por la industrialización y el desarrollo del sector textil. Medellín es la capital de la moda en Colombia y en la ciudad, se utilizan diariamente tintorerías dedicadas al teñido de prendas índigo. Son grandes consumidores de agua potable y subterránea. El agua, utilizada con mínima conciencia, es su mayor materia prima y la que genera altos costos mensuales. Este estudio construyó un reactor de lecho fluidizado (RLF. La antracita se utilizó como material de soporte para investigar la eficiencia de remoción de la demanda química de oxígeno (DQO, demanda bioquímica de oxígeno (DBO y el color del agua residual textil simulada. Los siguientes estudios a escala de laboratorio fueron realizados inicialmente para preparar los ensayos de inmovilización de microorganismos en medio de soporte sólido y los períodos de puesta en marcha y operación de la planta piloto: bioaumentación y bioadaptación de inóculo tomado de efluente textil y remoción de color en reactor discontinuo. Los resultados indicaron que es posible lograr el tratamiento aeróbico de agua residual textil después de obtener un inóculo adaptado a las fuentes de carbono de tensoactivos e índigo.

Effect of mungbean residue and nitrogen levels on barley

International Nuclear Information System (INIS)

Jan, A.; Muhammad, Z.; Daur, I.; Khan, I.A.

2011-01-01

A field experiment was conducted to evaluate response of barley to mungbean residue (0, 10, 20 and 30 Mg ha/sup -1/), nitrogen levels (0, 25, 50 and 75 kg ha/sup -1/) and their interaction. Emergence m/sup -2/ (50), plant height (109 cm), leaf area tiller-1 (106 cm/sup 2/), lodging score (5.55), termites attack (3.4%), grains spike-1 (67), biological yield (12.80 Mg ha/sup -1/) and grain yield (2.32 Mg ha/sup -1/) were significantly (p=0.05) higher for 30 Mg ha/sup -1/ mungbean residue compared to other levels. Similarly plant height (110 cm), lodging score (5.29) and biological yield (13.75 Mg ha/sup -1/) were higher at 75 kg ha/sup -1/ N compared to other levels of N. Productive tillers m/sup -2/, grains spike/sup -1/, 1000 grain weight, grain yield and harvest index were optimum at 50 kg ha-1 N as compared to 75 kg ha/sup -1/ N that encouraged lodging. Interaction between residue and nitrogen indicated that 10 Mg residue and 50 kg N ha/sup -1/ is recommended to achieve maximum net return under comparable conditions. (author)

Nitrous oxide emission from soils amended with crop residues

NARCIS (Netherlands)

Velthof, G.L.; Kuikman, P.J.; Oenema, O.

2002-01-01

Crop residues incorporated in soil are a potentially important source of nitrous oxide (N2O), though poorly quantified. Here, we report on the N2O emission from 10 crop residues added to a sandy and a clay soil, both with and without additional nitrate (NO3-). In the sandy soil, total nitrous oxide

Bloqueio neuromuscular residual após o uso de rocurônio ou cisatracúrio Bloqueo neuromuscular residual después del uso de rocuronio o cisatracúrio Residual neuromuscular block after rocuronium or cisatracurium

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Bruno Salomé de Morais

2005-12-01

Full Text Available JUSTIFICATIVA E OBJETIVOS: O bloqueio neuromuscular residual na sala de recuperação pós-anestésica (SRPA é um fenômeno que pode aumentar a morbidade pós-operatória, com incidência variando entre 0% e 93%. O objetivo deste estudo foi avaliar a incidência do bloqueio neuromuscular residual na SRPA. MÉTODO: Foram estudados 93 pacientes submetidos à cirurgia geral com o uso de cisatracúrio ou rocurônio. Após a admissão na SRPA foi realizada a monitorização objetiva da função neuromuscular (aceleromiografia - TOF GUARD. O bloqueio neuromuscular residual foi definido como SQE JUSTIFICATIVA Y OBJETIVOS: El bloqueo neuromuscular residual en la sala de recuperación posanestésica (SRPA es un fenómeno que puede aumentar la morbidez posoperatoria, con incidencia variando entre 0% y 93%. La finalidad de este estudio fue evaluar la incidencia del bloqueo neuromuscular residual en la SRPA. MÉTODO: Fueron estudiados 93 pacientes sometidos a cirugía general con el uso de cisatracúrio o rocuronio. Después de la admisión en la SRPA fue realizada la monitorización objetiva de la función neuromuscular (aceleromiografia - TOF-GUARD. El bloqueo neuromuscular residual fue definido como TOF BACKGROUND AND OBJECTIVES: Residual neuromuscular block in the post-anesthetic recovery unit (PACU may increase postoperative morbidity from 0% to 93%. This study aimed at evaluating the incidence of residual neuromuscular block in the PACU. METHODS: Participated in this study 93 patients submitted to general anesthesia with cisatracurium or rocuronium. After PACU admission, neuromuscular function was objectively monitored (acceleromyography - TOF GUARD. Residual neuromuscular block was defined as TOF < 0.9. RESULTS: From 93 patients, 53 received cisatracurium and 40 rocuronium. Demographics, procedure length and the use of antagonists were comparable between groups. Residual neuromuscular block was 32% in subgroup C (cisatracurium and 30% in subgroup R

Nitrogen Transfer from Cover Crop Residues to Onion Grown under Minimum Tillage in Southern Brazil

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Leoncio de Paula Koucher

2017-08-01

Full Text Available ABSTRACT Nitrogen derived from cover crop residues may contribute to the nutrition of onion grown under minimum tillage (MT and cultivated in rotation. The aim of this study was to evaluate the N transferred from different cover crop residues to the onion crop cultivated under MT in southern Brazil. In June 2014, oilseed radish, black oat, and oilseed radish + black oat residues labeled with 15N were deposited on the soil surface before transplanting onions. During the growth season and at harvest, young expanded onion leaves, complete plants, and samples from different soil layers were collected and analyzed for recovery of 15N-labeled residue. Oilseed radish decomposed faster than other residues and 4 % of residue N was recovered in leaves and bulbs at harvest, but in general, N in plant organs was derived from sources other than the cover crop residues. In addition, leaf N was in the proper range for all treatments and was adequately mobilized to the bases for bulbing. The N derived from decomposing residues contributed little to onion development and the use of these plants should be chosen based on their advantages for physical and biological soil quality.

Taponamiento de goteros y del filtro de discos con agua residual sanitaria de una laguna de maduración.

OpenAIRE

Oliveira Batista, Rafael; Alves Soares, Antonio; Zapata Marin, Olga Lucía; Rodrigues de Souza, José Antônio; Vinícius Leite, Caio; Astoni Moreira, Débora

2013-01-01

El método de riego localizado, ha sido usado para la aplicación de aguas residuales, debido a la elevada eficiencia en la aplicación del fluido y el bajo riesgo de contaminación del producto agrícola y de los operadores de campo. Sin embargo, los sistemas de riego localizado, poseen emisores que presentan alta susceptibilidad al taponamiento. En el presente trabajo, se analizó el potencial de taponamiento de distintos goteros y del filtro de discos con agua residual sanitaria proveniente de u...

Reuse of a residue from petrochemical industry with portland cement Reutilización de un residuo de la industria petroquímica como adición al cemento portland

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Janneth Torres Agredo

2012-06-01

Full Text Available In this article the possibility of using waste from the petrochemical industry,as partial replacement of Portland cement is studied, evaluating the presenceof contaminants in the waste and the encapsulation, once it is confined on the cement. This has been done, in order to find a use to this residue without cause damage to the environment. This residue, called spent fluid catalytic cracking catalyst (FCC, is mainly formed by a type Y zeolite, which is dispersing in an inorganic oxides matrix. The toxicity characteristic leaching proceeding was applied, in mortars adding with 20% of FCC as Portland cement replacement. The results showed that the residue does not represent a problem from the point of view of the leaching of elements, such as As, Pb, Zn, Cr, and La, which were below to the permissible limits. Additionally, the pozzolanic activity of FCC was evaluated according to ASTM C311, where the efficiency of the residue as pozzolanic addition is demonstrated. With the results the importance of reusing a residue of the petrochemical industry is emphasized, that decreases the amount of cement to be used and improves the mechanical resistance of the materials containing it.En el presente artículo se estudia la posibilidad de utilizar un residuo de la industria petroquímica, como sustitución parcial del cemento Portland, evaluando la presencia de elementos contaminantes en el residuo y su encapsulación, una vez se haya confinado con el cemento. Lo anterior, con el fin de determinar si su uso como material de construcción, puede o no causar un efecto negativo al medio ambiente. El residuo, denominado catalizador usado de craqueo catalítico (FCC, es un material que está compuesto por una zeolita tipo Y, dispersa en una matriz de óxidos inorgánicos. Se aplicó la técnica de TCLP (del inglés Toxicity Characteristic Leaching Procedure, en morteros adicionados con un 20%, de FCC con respecto a la cantidad de cemento. Los resultados

Glycans and glycosylation of platelets: current concepts and implications for transfusion

DEFF Research Database (Denmark)

Sørensen, Anne Louise; Hoffmeister, Karin M; Wandall, Hans H

2008-01-01

by the alphaMbeta2 hepatic lectin receptor. Capping the exposed beta-N-acetylglucosamine residues by enzymatic galactosylation restored the circulation of short-term chilled murine platelets, introducing a novel method that allows for cold storage of platelet. Recent studies have, however, shown...... that galactosylation is not sufficient to restore circulation of long-term refrigerated platelets. Additional data indicate that differential carbohydrate-mediated mechanisms may exist for clearance of short-term and long-term cold-stored platelets. SUMMARY: Room temperature storage of platelet products increases...... the risk of transfusion-mediated sepsis and accelerates platelet deterioration, limiting platelet shelf life. Recent evidence suggests that glycoengineering of platelets might allow for their cold storage, significantly improving the quality of platelet products....

Virulent PB1-F2 residues: effects on fitness of H1N1 influenza A virus in mice and changes during evolution of human influenza A viruses.

Science.gov (United States)

Alymova, Irina V; McCullers, Jonathan A; Kamal, Ram P; Vogel, Peter; Green, Amanda M; Gansebom, Shane; York, Ian A

2018-05-10

Specific residues of influenza A virus (IAV) PB1-F2 proteins may enhance inflammation or cytotoxicity. In a series of studies, we evaluated the function of these virulence-associated residues in the context of different IAV subtypes in mice. Here, we demonstrate that, as with the previously assessed pandemic 1968 (H3N2) IAV, PB1-F2 inflammatory residues increase the virulence of H1N1 IAV, suggesting that this effect might be a universal feature. Combining both inflammatory and cytotoxic residues in PB1-F2 enhanced virulence further, compared to either motif alone. Residues from these virulent motifs have been present in natural isolates from human seasonal IAV of all subtypes, but there has been a trend toward a gradual reduction in the number of virulent residues over time. However, human IAV of swine and avian origin tend to have more virulent residues than do the human-adapted seasonal strains, raising the possibility that donation of PB1 segments from these zoonotic viruses may increase the severity of some seasonal human strains. Our data suggest the value of surveillance of virulent residues in both human and animal IAV to predict the severity of influenza season.

Distribución de las transformaciones lineales de los residuos mínimos cuadrados studentizados internamente = Distribution of linear transformations of internally studentized least squares residuals

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Seppo Pynnönem

2012-03-01

Full Text Available Los residuos de regresión por mínimos cuadrados ordinarios tienen una distribución que depende de un parámetro escalar. El término “Studentización” se utiliza comúnmente para describir una cantidad U dependiente de un parámetro de escala dividida por una estimación de escala S, de forma que el ratio resultante, U/S, sigue una distribución que no tiene el inconveniente del parámetro de escala desconocido. La Studentización externa hace referencia a un ratio en que el numerador y el denominador son independientes, mientras que la Studentización interna se refiere al ratio en que ambos son dependientes. La ventaja de la Studentización interna es que puede utilizarse cualquier estimador de escala común, mientras que en la Studentización externa, cada residuo es obtenido por un estimador de escala diferente, con el fin de alcanzar la independencia. Con errores de regresión normales, la distribución conjunta de un conjunto arbitrario (linealmente independiente de residuos Studentizados internamente está bien documentada. Sin embargo, en algunas aplicaciones una combinación lineal de residuos internamente Studentizados puede resultar útil. Sus limitaciones han sido bien documentadas, pero la distribución no parece haberse derivado en la literatura. Este trabajo contribuye a la literatura existente, en el sentido de obtener la distribución conjunta de una transformación arbitraria lineal de residuos de regresión por mínimos cuadrados ordinarios internamente Studentizados con distribución esférica de error. Todas las principales versiones de los residuos de regresión internamente Studentizados que se han utilizado comúnmente en la literatura son casos especiales de la transformación lineal.Ordinary least squares regression residuals have a distribution that is dependent on a scale parameter. The term 'Studentization' is commonly used to describe a scale parameter dependent quantity U divided by a scale estimate S such

Decomposition of sugar cane crop residues under different nitrogen rates

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Douglas Costa Potrich

2014-09-01

Full Text Available The deposition of organic residues through mechanical harvesting of cane sugar is a growing practice in sugarcane production system. The maintenance of these residues on the soil surface depends mainly on environmental conditions. Nitrogen fertilization on dry residues tend to retard decomposition of these, providing benefits such as increased SOM. Thus, the object of this research was to evaluate the effect of different doses of nitrogen on sugar cane crop residues, as its decomposition and contribution to carbon sequestration in soil. The experiment was conducted in Dourados-MS and consisted of a randomized complete block design. Dried residues were placed in litter bags and the treatments were arranged in a split plot, being the four nitrogen rates (0, 50, 100 and 150 kg ha-1 N the plots, and the seven sampling times (0, 30, 60, 90, 120, 150 and 180 the spit plots. Decomposition rates of residues, total organic carbon and labile carbon on soil were analysed. The application of increasing N doses resulted in an increase in their decomposition rates. Despite this, note also the mineral N application as a strategy to get higher levels of labile carbon in soil.

Using N-15 Technique for Assessing Organic.N Turnover in Sandy Soil

International Nuclear Information System (INIS)

Soliman, S.; El-Akel, E.A.; Ismail, M.M.; El-Sherbiny, E.; Awad, E.E.

2008-01-01

Turnover of organic-N was traced under greenhouse condition. 15 N-labelled wheat and/or soybean residues were used as organic additives which applied individually or in combinations. These residues were applied at rates of 100, 75 and 25μg N g - 1 soil. Also, labelled ammonium sulfate with 2% 15 N atom excess, was applied either alone or in combination with the plant residues, at rates of 100, 75 and 25μg N g - 1 soil as single dose after 10 days from planting. Relative positive effect of the nitrogen plant residues on N-uptake and yield components can be arranged as follows: Soybean > wheat + > soybean > wheat residues. Tracer technique indicated that the mixture of labeled residues and ammonium sulfate at rates of (*50 + 50) and (*25 + 75), was effective on dry matter and N uptake. Effect of organic and inorganic nitrogen sources on portions N derived from residue (Ndfr) and N derived from fertilizer (Ndff) to wheat could be arranged as following: ammonium sulfate > soybean > mixture > wheat. Higher 15 N recovery percentage was noticed in grains as affected by addition of soybean residues combined with ordinary ammonium sulfate at rates of (*25 + 75) and (*50 + 50), respectively

Production of 15N-Labelled Liquid Organic Fertilisers Based on Manure and Crop Residue for Use in Fertigation Studies.

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Belén Martínez-Alcántara

Full Text Available Large quantities of crop residue and animal manure from agricultural and livestock activities are annually produced worldwide. With proper management, these residues are potentially valuable sources of plant nutrients, mainly N. Recycling such subproducts in sustainably-based agricultural systems can minimise the use of mineral fertilisers, and hence reduce the potential risk of surface and groundwater pollution. Therefore, the purpose of this study was to obtain (small scale two liquid labelled-organic fertilisers, an animal- and a vegetal-based organic (AO and VO, respectively fertiliser, to be used as organic N sources in subsequent fertigation studies. Forage maize (Zea mays L. grown under 15N-labelled fertiliser supply was used as raw material for VO fertiliser production, and also as 15N-labelled sheep feed to obtain 15N-labelled manure. The labelled faeces fraction was used as raw material for the AO fertiliser. The VO fertiliser was obtained after an acidic and an enzyme-driven hydrolysis. The AO fertiliser was obtained after acidic hydrolysis. The VO liquid fertiliser presented an N concentration of 330 mg·L-1, 85% of total N was organic, while ammonium and nitrate N accounted for 55% and 45% of the mineral nitrogen fraction, respectively. This fertiliser also exhibited high K, Ca and S concentrations and notable values for the remaining macro- and micronutrients. The AO liquid fertiliser had a similar total N concentration (496 mg·L-1, 82% of total N in an organic form to that of VO, but its mineral N fraction significantly differed, which came in a predominantly (95% ammonia form. It also had a high content of N, P, K and other macronutrients, and sufficient Fe, Zn, Mn, Cu and B levels, which suggests its suitability as a potential fertiliser. The percentage of 15N enrichment in both VO and AO liquid fertilisers exceeded 2% 15N atom excess, which enabled their use in subsequent assays run to assess nitrogen uptake efficiency.

Evolution of Chemical Diversity in a Group of Non-Reduced Polyketide Gene Clusters: Using Phylogenetics to Inform the Search for Novel Fungal Natural Products

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Kurt Throckmorton

2015-09-01

Full Text Available Fungal polyketides are a diverse class of natural products, or secondary metabolites (SMs, with a wide range of bioactivities often associated with toxicity. Here, we focus on a group of non-reducing polyketide synthases (NR-PKSs in the fungal phylum Ascomycota that lack a thioesterase domain for product release, group V. Although widespread in ascomycete taxa, this group of NR-PKSs is notably absent in the mycotoxigenic genus Fusarium and, surprisingly, found in genera not known for their secondary metabolite production (e.g., the mycorrhizal genus Oidiodendron, the powdery mildew genus Blumeria, and the causative agent of white-nose syndrome in bats, Pseudogymnoascus destructans. This group of NR-PKSs, in association with the other enzymes encoded by their gene clusters, produces a variety of different chemical classes including naphthacenediones, anthraquinones, benzophenones, grisandienes, and diphenyl ethers. We discuss the modification of and transitions between these chemical classes, the requisite enzymes, and the evolution of the SM gene clusters that encode them. Integrating this information, we predict the likely products of related but uncharacterized SM clusters, and we speculate upon the utility of these classes of SMs as virulence factors or chemical defenses to various plant, animal, and insect pathogens, as well as mutualistic fungi.

Nitrogen mineralization and denitrification as influenced by crop residue particle size

DEFF Research Database (Denmark)

Ambus, P.; Jensen, E.S.

1997-01-01

1: N-15-labelled ground (less than or equal to 3 mm) and cut (25 mm) barley residue, and microcrystalline cellulose+glucose were mixed into a sandy loam soil with additional inorganic N. Experiment 2: inorganic N-15 and C2H2 were added to soils with barley and pea material after 3, 26, and 109 days......Managing the crop residue particle size has the potential to affect N conservation in agricultural systems. We investigated the influence of barley (Hordeum vulgare) and pea (Pisum sativum) crop residue particle size on N mineralization and denitrification in two laboratory experiments. Experiment...... for measuring gross N mineralization and denitrification. Net N immobilization over 60 days in Experiment 1 cumulated to 63 mg N kg(-1) soil (ground barley), 42 (cut barley), and 122 (cellulose+glucose). More N was seemingly net mineralized from ground barley (3.3 mg N kg(-1) soil) than from cut barley (2.7 mg...

Residual stresses and mechanical properties of Si3N4/SiC multilayered composites with different SiC layers; Las tensiones residuales y las propiedades mecánicas de compuestos multicapa de Si3N4/SiC con diferentes capas de SiC

Energy Technology Data Exchange (ETDEWEB)

Liua, S.; Lia, Y.; Chena, P.; Lia, W.; Gaoa, S.; Zhang, B.; Yeb, F.

2017-11-01

The effect of residual stresses on the strength, toughness and work of fracture of Si3N4/SiC multilayered composites with different SiC layers has been investigated. It may be an effective way to design and optimize the mechanical properties of Si3N4/SiC multilayered composites by controlling the properties of SiC layers. Si3N4/SiC multilayered composites with different SiC layers were fabricated by aqueous tape casting and pressureless sintering. Residual stresses were calculated by using ANSYS simulation, the maximum values of tensile and compressive stresses were 553.2MPa and −552.1MPa, respectively. Step-like fracture was observed from the fracture surfaces. Fraction of delamination layers increased with the residual stress, which can improve the reliability of the materials. Tensile residual stress was benefit to improving toughness and work of fracture, but the strength of the composites decreased. [Spanish] Se ha investigado el efecto de las tensiones residuales en la resistencia, dureza y trabajo de fractura de los compuestos multicapa de Si3N4/SiC con diferentes capas de SiC. Puede ser una manera eficaz de diseñar y optimizar las propiedades mecánicas de los compuestos multicapa de Si3N4/SiC mediante el control de las propiedades de las capas de SiC. Los compuestos multicapa de Si3N4/SiC con diferentes capas de SiC se fabricaron por medio de colado en cinta en medio acuoso y sinterización sin presión. Las tensiones residuales se calcularon mediante el uso de la simulación ANSYS, los valores máximos de las fuerzas de tracción y compresión fueron 553,2 MPa y −552,1 MPa, respectivamente. Se observó una fractura escalonada a partir de las superficies de fractura. La fracción de capas de deslaminación aumenta con la tensión residual, lo que puede mejorar la fiabilidad de los materiales. La fuerza de tracción residual era beneficiosa para la mejora de la dureza y el trabajo de fractura, pero la resistencia de los compuestos disminuyó.

Residual Glycerol from Biodiesel Manufacturing, Waste or Potential Source of Bioenergy: A Review Glicerol Residual de la Producción de Biodiesel, Residuo o Potencial Fuente de Energía: Una Revisión

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Claudia Santibáñez

2011-09-01

Full Text Available This review provides a summary of the research conducted on the use of crude glycerol, the major byproduct of the biodiesel industry, as substrate for anaerobic co-digestion and production of biogas. In general, for every 100 kg biodiesel produced, approximately 10 kg crude glycerol is generated. Because this glycerol is expensive to purify for use in food, pharmaceutical, or cosmetic industries, biodiesel producers must seek alternative methods for its disposal. Several studies have demonstrated that the use of crude glycerol as a C source for fermentation and biogas generation is a promising alternative use for this waste material. The high C content of glycerol increases the C:N ratio in the mixture, avoiding the inhibition of the process by the excess of N increasing methane production of digesters by 50 to 200%. Anaerobic co-digestion of glycerol and a variety of residual biomasses may be a good integrated solution for managing these wastes and simultaneously producing a source of bioenergy in an environmentally friendly way. On the other hand, after anaerobic treatment of glycerol, an organic matter-rich solid waste is generated (digestate. The incorporation of digestates from glycerol co-digestion to soils constitutes an important source of organic matter and nutrients for plants. However, the potential of digestates as an organic soil amendment has not been sufficiently studied. The utilization of glycerol as a potential source of energy, rather than as a waste, seems to be a convenient way of lowering the costs of biodiesel production and making this emerging industry more competitive.Esta revisión proporciona un resumen de la investigación realizada sobre el uso de glicerol crudo, principal subproducto de la industria del biodiesel, como sustrato para la co-digestión anaerobia y producción de biogas. En general, por cada 100 kg de biodiesel producido, se generan aproximadamente 10 kg de glicerol. Debido al alto costo de purificación

Evaluación de la Remoción de Nitrógeno, Fósforo y Sulfuros en Agua Residual Doméstica, Utilizando Phragmites australis en Bioreactores

OpenAIRE

Correa-Torres, Sandra N; Gamarra, Yolanda; Salazar, Andrés A; Pitta, Natalia M

2015-01-01

En el presente estudio se evaluó la remoción de nitrógeno, fósforo y sulfuros en un agua residual doméstica mediante fitorremediación utilizando Phragmites australis en bioreactores a escala de laboratorio. Se determinó el estudio las condiciones hidráulicas en reactores analizando las variables de relación geométrica largo:ancho (4:1 y 1:4) y usando un medio filtrante (grava/arena). Adicionalmente se evaluó el crecimiento de P. australis en los reactores y se analizó los porcentajes de remoc...

Occurrence of an Unusual Hopanoid-containing Lipid A Among Lipopolysaccharides from Bradyrhizobium Species*

Science.gov (United States)

Komaniecka, Iwona; Choma, Adam; Mazur, Andrzej; Duda, Katarzyna A.; Lindner, Buko; Schwudke, Dominik; Holst, Otto

2014-01-01

The chemical structures of the unusual hopanoid-containing lipid A samples of the lipopolysaccharides (LPS) from three strains of Bradyrhizobium (slow-growing rhizobia) have been established. They differed considerably from other Gram-negative bacteria in regards to the backbone structure, the number of ester-linked long chain hydroxylated fatty acids, as well as the presence of a tertiary residue that consisted of at least one molecule of carboxyl-bacteriohopanediol or its 2-methyl derivative. The structural details of this type of lipid A were established using one- and two-dimensional NMR spectroscopy, chemical composition analyses, and mass spectrometry techniques (electrospray ionization Fourier-transform ion cyclotron resonance mass spectrometry and MALDI-TOF-MS). In these lipid A samples the glucosamine disaccharide characteristic for enterobacterial lipid A was replaced by a 2,3-diamino-2,3-dideoxy-d-glucopyranosyl-(GlcpN3N) disaccharide, deprived of phosphate residues, and substituted by an α-d-Manp-(1→6)-α-d-Manp disaccharide substituting C-4′ of the non-reducing (distal) GlcpN3N, and one residue of galacturonic acid (d-GalpA) α-(1→1)-linked to the reducing (proximal) amino sugar residue. Amide-linked 12:0(3-OH) and 14:0(3-OH) were identified. Some hydroxy groups of these fatty acids were further esterified by long (ω-1)-hydroxylated fatty acids comprising 26–34 carbon atoms. As confirmed by mass spectrometry techniques, these long chain fatty acids could form two or three acyloxyacyl residues. The triterpenoid derivatives were identified as 34-carboxyl-bacteriohopane-32,33-diol and 34-carboxyl-2β-methyl-bacteriohopane-32,33-diol and were covalently linked to the (ω-1)-hydroxy group of very long chain fatty acid in bradyrhizobial lipid A. Bradyrhizobium japonicum possessed lipid A species with two hopanoid residues. PMID:25371196

Residual nilpotence and residual solubility of groups

International Nuclear Information System (INIS)

Mikhailov, R V

2005-01-01

The properties of the residual nilpotence and the residual solubility of groups are studied. The main objects under investigation are the class of residually nilpotent groups such that each central extension of these groups is also residually nilpotent and the class of residually soluble groups such that each Abelian extension of these groups is residually soluble. Various examples of groups not belonging to these classes are constructed by homological methods and methods of the theory of modules over group rings. Several applications of the theory under consideration are presented and problems concerning the residual nilpotence of one-relator groups are considered.

Structural and functional importance of transmembrane domain 3 (TM3) in the aspartate:alanine antiporter AspT: topology and function of the residues of TM3 and oligomerization of AspT.

Science.gov (United States)

Nanatani, Kei; Maloney, Peter C; Abe, Keietsu

2009-04-01

AspT, the aspartate:alanine antiporter of Tetragenococcus halophilus, a membrane protein of 543 amino acids with 10 putative transmembrane (TM) helices, is the prototype of the aspartate:alanine exchanger (AAE) family of transporters. Because TM3 (isoleucine 64 to methionine 85) has many amino acid residues that are conserved among members of the AAE family and because TM3 contains two charged residues and four polar residues, it is thought to be located near (or to form part of) the substrate translocation pathway that includes the binding site for the substrates. To elucidate the role of TM3 in the transport process, we carried out cysteine-scanning mutagenesis. The substitutions of tyrosine 75 and serine 84 had the strongest inhibitory effects on transport (initial rates of l-aspartate transport were below 15% of the rate for cysteine-less AspT). Considerable but less-marked effects were observed upon the replacement of methionine 70, phenylalanine 71, glycine 74, arginine 76, serine 83, and methionine 85 (initial rates between 15% and 30% of the rate for cysteine-less AspT). Introduced cysteine residues at the cytoplasmic half of TM3 could be labeled with Oregon green maleimide (OGM), whereas cysteines close to the periplasmic half (residues 64 to 75) were not labeled. These results suggest that TM3 has a hydrophobic core on the periplasmic half and that hydrophilic residues on the cytoplasmic half of TM3 participate in the formation of an aqueous cavity in membranes. Furthermore, the presence of l-aspartate protected the cysteine introduced at glycine 62 against a reaction with OGM. In contrast, l-aspartate stimulated the reactivity of the cysteine introduced at proline 79 with OGM. These results demonstrate that TM3 undergoes l-aspartate-induced conformational alterations. In addition, nonreducing sodium dodecyl sulfate-polyacrylamide gel electrophoresis analyses and a glutaraldehyde cross-linking assay suggest that functional AspT forms homo-oligomers as a

Structural and Functional Importance of Transmembrane Domain 3 (TM3) in the Aspartate:Alanine Antiporter AspT: Topology and Function of the Residues of TM3 and Oligomerization of AspT▿

Science.gov (United States)

Nanatani, Kei; Maloney, Peter C.; Abe, Keietsu

2009-01-01

AspT, the aspartate:alanine antiporter of Tetragenococcus halophilus, a membrane protein of 543 amino acids with 10 putative transmembrane (TM) helices, is the prototype of the aspartate:alanine exchanger (AAE) family of transporters. Because TM3 (isoleucine 64 to methionine 85) has many amino acid residues that are conserved among members of the AAE family and because TM3 contains two charged residues and four polar residues, it is thought to be located near (or to form part of) the substrate translocation pathway that includes the binding site for the substrates. To elucidate the role of TM3 in the transport process, we carried out cysteine-scanning mutagenesis. The substitutions of tyrosine 75 and serine 84 had the strongest inhibitory effects on transport (initial rates of l-aspartate transport were below 15% of the rate for cysteine-less AspT). Considerable but less-marked effects were observed upon the replacement of methionine 70, phenylalanine 71, glycine 74, arginine 76, serine 83, and methionine 85 (initial rates between 15% and 30% of the rate for cysteine-less AspT). Introduced cysteine residues at the cytoplasmic half of TM3 could be labeled with Oregon green maleimide (OGM), whereas cysteines close to the periplasmic half (residues 64 to 75) were not labeled. These results suggest that TM3 has a hydrophobic core on the periplasmic half and that hydrophilic residues on the cytoplasmic half of TM3 participate in the formation of an aqueous cavity in membranes. Furthermore, the presence of l-aspartate protected the cysteine introduced at glycine 62 against a reaction with OGM. In contrast, l-aspartate stimulated the reactivity of the cysteine introduced at proline 79 with OGM. These results demonstrate that TM3 undergoes l-aspartate-induced conformational alterations. In addition, nonreducing sodium dodecyl sulfate-polyacrylamide gel electrophoresis analyses and a glutaraldehyde cross-linking assay suggest that functional AspT forms homo-oligomers as a

O-Linked β-N-Acetylglucosaminylation (O-GlcNAcylation) in Primary and Metastatic Colorectal Cancer Clones and Effect of N-Acetyl-β-d-glucosaminidase Silencing on Cell Phenotype and Transcriptome*

Science.gov (United States)

Yehezkel, Galit; Cohen, Liz; Kliger, Adi; Manor, Esther; Khalaila, Isam

2012-01-01

O-Linked β-N-acetylglucosamine (O-GlcNAc) glycosylation is a regulatory post-translational modification occurring on the serine or threonine residues of nucleocytoplasmic proteins. O-GlcNAcylation is dynamically regulated by O-GlcNAc transferase and O-GlcNAcase (OGA), which are responsible for O-GlcNAc addition and removal, respectively. Although O-GlcNAcylation was found to play a significant role in several pathologies such as type II diabetes and neurodegenerative diseases, the role of O-GlcNAcylation in the etiology and progression of cancer remains vague. Here, we followed O-GlcNAcylation and its catalytic machinery in metastatic clones of human colorectal cancer and the effect of OGA knockdown on cellular phenotype and on the transcriptome. The colorectal cancer SW620 metastatic clone exhibited increased O-GlcNAcylation and decreased OGA expression compared with its primary clone, SW480. O-GlcNAcylation elevation in SW620 cells, through RNA interference of OGA, resulted in phenotypic alterations that included acquisition of a fibroblast-like morphology, which coincides with epithelial metastatic progression and growth retardation. Microarray analysis revealed that OGA silencing altered the expression of about 1300 genes, mostly involved in cell movement and growth, and specifically affected metabolic pathways of lipids and carbohydrates. These findings support the involvement of O-GlcNAcylation in various aspects of tumor cell physiology and suggest that this modification may serve as a link between metabolic changes and cancer. PMID:22730328

The Effect of Fucoidan from the Brown Alga Fucus evanescence on the Activity of α-N-Acetylgalactosaminidase of Human Colon Carcinoma Cells

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Irina Bakunina

2018-05-01

Full Text Available α-N-acetylgalactosaminidase (EC 3.2.1.49 (alpha-NaGalase catalyzes the hydrolysis of N-acetamido-2-deoxy-α-d-galactoside residues from non-reducing ends of various complex carbohydrates and glycoconjugates. It is known that human cancer cells express an alpha-NaGalase, which accumulates in the blood plasma of patients. The enzyme deglycosylates the Gc protein-derived macrophage activating factor (GcMAF and inhibits macrophage activity acting as an immunosuppressor. The high specific activity 0.033 ± 0.002 μmol mg−1 min−1 of the enzyme was found in human colon carcinoma cells DLD-1. The alpha-NaGalase of DLD-1 cells was isolated and biochemical characterized. The enzyme exhibits maximum activity at pH 5.2 and temperature 55 °C. The Km is 2.15 mM, Vmax–0.021 μmol min−1 mL−1, kcat–1.55 min−1 and kcat/Km–0.72 min−1 mM−1 at 37 °C, pH 5.2. The effects of fucoidan from the brown alga Fucus evanescence on the activity of alpha-NaGalase in human colon carcinoma DLD-1 cells and on the biosynthesis of this enzyme were investigated. It was shown that fucoidan did not inhibit free alpha-NaGalase, however, it reduced the expression of the enzyme in the DLD-1 cells at IC50 73 ± 4 μg mL−1.

A residual Monte Carlo method for discrete thermal radiative diffusion

International Nuclear Information System (INIS)

Evans, T.M.; Urbatsch, T.J.; Lichtenstein, H.; Morel, J.E.

2003-01-01

Residual Monte Carlo methods reduce statistical error at a rate of exp(-bN), where b is a positive constant and N is the number of particle histories. Contrast this convergence rate with 1/√N, which is the rate of statistical error reduction for conventional Monte Carlo methods. Thus, residual Monte Carlo methods hold great promise for increased efficiency relative to conventional Monte Carlo methods. Previous research has shown that the application of residual Monte Carlo methods to the solution of continuum equations, such as the radiation transport equation, is problematic for all but the simplest of cases. However, the residual method readily applies to discrete systems as long as those systems are monotone, i.e., they produce positive solutions given positive sources. We develop a residual Monte Carlo method for solving a discrete 1D non-linear thermal radiative equilibrium diffusion equation, and we compare its performance with that of the discrete conventional Monte Carlo method upon which it is based. We find that the residual method provides efficiency gains of many orders of magnitude. Part of the residual gain is due to the fact that we begin each timestep with an initial guess equal to the solution from the previous timestep. Moreover, fully consistent non-linear solutions can be obtained in a reasonable amount of time because of the effective lack of statistical noise. We conclude that the residual approach has great potential and that further research into such methods should be pursued for more general discrete and continuum systems

Evaluación del efecto residual del Temephos en larvas de Aedes aegypti en Lima, Perú

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Miriam Palomino S

2006-07-01

Full Text Available El temephos ha sido usado como la única estrategia de control para Aedes aegypti en Lima durante los últimos años. Objetivo: Evaluar la eficacia residual de temephos para el control de Ae. aegypti en condiciones de campo y laboratorio en Lima, Perú. Materiales y métodos: Se eligieron ocho tanques bajos de concreto (TBC depósitos predominantemente infestados con Ae. aegypti en el distrito de San Juan de Lurigancho, situado al norte del área suburbana de Lima. Se cuantificó el número de larvas con ayuda de una red de mano y luego fueron devueltas a los TBC. Los TBC fueron tratados con temephos a una dosis de 1 ppm en el día cero (0. Se evaluó la mortalidad de las larvas salvajes a 24, 48 y 72 horas y se hizo un seguimiento periódico cada siete días hasta las 14 semanas. Al mismo tiempo y en forma semanal se recogieron 500 mL de agua de cada TBC tratado y fueron enviados al laboratorio para los bioensayos (exposición de 25 larvas durante 24 a 48 horas y registro de mortalidad. Resultados: Todos los TBC estuvieron infestados (mediana de 43,5 larvas. La mortalidad en los TBC a 24 horas fue 99,7% y no se evidenció recolonización de los TBC hasta la 14.ª semana. Sin embargo, en el laboratorio se evidencia disminución semanal de 11% de la mortalidad desde la 7.ª semana. La mortalidad en la semana número 14 estuvo asociada de forma inversa con la frecuencia de recambio de agua en los TBC (p<0,05. Conclusiones: No hubo evidencia en condiciones de campo de eficacia residual disminuida del temephos a la 14.a semana de aplicación. Este tipo de estudios deberían hacerse de manera rutinaria para vigilar la efectividad del larvicida temephos en Lima.

Identification of residues important for the activity of Haloferax volcanii AglD, a component of the archaeal N-glycosylation pathway.

Science.gov (United States)

Kaminski, Lina; Eichler, Jerry

2010-05-06

In Haloferax volcanii, AglD adds the final hexose to the N-linked pentasaccharide decorating the S-layer glycoprotein. Not knowing the natural substrate of the glycosyltransferase, together with the challenge of designing assays compatible with hypersalinity, has frustrated efforts at biochemical characterization of AglD activity. To circumvent these obstacles, an in vivo assay designed to identify amino acid residues important for AglD activity is described. In the assay, restoration of AglD function in an Hfx. volcanii aglD deletion strain transformed to express plasmid-encoded versions of AglD, generated through site-directed mutagenesis at positions encoding residues conserved in archaeal homologues of AglD, is reflected in the behavior of a readily detectable reporter of N-glycosylation. As such Asp110 and Asp112 were designated as elements of the DXD motif of AglD, a motif that interacts with metal cations associated with nucleotide-activated sugar donors, while Asp201 was predicted to be the catalytic base of the enzyme.

Basic amino acid residues located in the N-terminal region of BEND3 are essential for its nuclear localization

Energy Technology Data Exchange (ETDEWEB)

Shiheido, Hirokazu, E-mail: shiheido@ak.med.kyoto-u.ac.jp; Shimizu, Jun

2015-02-20

BEN domain-containing protein 3 (BEND3) has recently been reported to function as a heterochromatin-associated protein in transcriptional repression in the nucleus. BEND3 should have nuclear localization signals (NLSs) to localize to the nucleus in light of its molecular weight, which is higher than that allowed to pass through nuclear pore complexes. We here analyzed the subcellular localization of deletion/site-directed mutants of human BEND3 by an immunofluorescence assay in an attempt to identify the amino acids essential for its nuclear localization. We found that three basic amino acid residues located in the N-terminal region of BEND3 (BEND3{sub 56–58}, KRK) are essential, suggesting that these residues play a role as a functional NLS. These results provide valuable information for progressing research on BEND3. - Highlights: • BEND3 localizes to the nucleus. • The N-terminal 60 amino acids region of BEND3 contains NLS. • Amino acids located between 56 and 58 of BEND3 (KRK) are part of NLS. • KRK motif is highly conserved among BEND3 homologs.

Assessing a sustainable sugarcane production system in Tucumán, Argentina: Part 1: Dynamics of sugarcane harvest residue (trash decomposition Evaluación de un sistema sustentable de producción de caña de azúcar en Tucumán, R. Argentina. Parte I: Dinámica de la descomposición del residuo de la cosecha en verde de la caña de azúcar

Directory of Open Access Journals (Sweden)

Patricia A. Digonzelli

2011-06-01

Full Text Available The elimination of burning practices in sugarcane harvest has led to more sustainable productive systems, with lower impact on the environment and on communities. The present paper is part of a study in which two sugarcane management systems were compared: (a one with sugarcane harvest residue kept on the ground (trash blanketing; and (b one without trash blanketing (burnt residue. Cultivar LCP 85-384 was planted in macro-plots in a commercial field in Albarracín, Tucumán, Argentina. A split-plot experimental design with three replications was used. Each plot had five 30 m-long rows. Two crop cycles (2006/2007 and 2007/2008, i.e. second and third ratoon, were evaluated. From the end of harvest onwards, residue amount (dry matter/ha and residue C/N relationship were determined periodically. At the beginning and at the end of each crop cycle, residue P and K contents were assessed. Residue left after harvest amounted to 12 and 16 tons of dry matter per hectare in the first and second evaluated crop cycles, respectively, but decreased significantly throughout these periods. Residue C/N relationship was over 100 in both crop cycles (117 and 101, respectively, but decreased significantly in their course. Reductions in both sugarcane residue and C/N relationship were correlated with days after harvest and accumulated thermal time (∑ mean daily air temperature. Trash initial C concentration was similar in both crop cycles and amounted to approximately 45%, whereas initial N concentration differed (0.4% and 0.6% in second and third ratoon, respectively. Residue decomposition contributed 3800 to 5700 kg of C, 7 to 50 kg of N and 45 to 40 kg of K per ha to the agro-ecosystem in both crop cycles studied.La eliminación de la quema durante la cosecha de la caña de azúcar llevó a la implementación de sistemas productivos más sustentables, con menos impacto ambiental y más amigables con las poblaciones vecinas. El presente trabajo forma parte de un

Mapping the N-Z plane: residual mass regularities

International Nuclear Information System (INIS)

Hirsch, J.G.; Frank, A.; Velazquez, V.

2004-01-01

A new development in the study of the deviations between experimental nuclear masses and those calculated in the framework of the Finite Range Droplet Model is introduced. Some frequencies are isolated and used in a simple fit to reduce significantly the error width. The presence of this regular residual correlations suggests that the Strutinsky method of including microscopic fluctuations in nuclear masses could be improved. (Author)

Comparación de la reglamentación para el manejo de lodos provenientes de agua residual en Argentina, Chile y Colombia

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Fabián Andrés Ospina López

2017-06-01

Full Text Available El presente artículo presenta resultados de una revisión sobre el manejo y disposición final de lodos generados en las plantas de tratamiento de agua residual, los cuales deben ser sometidos a diferentes tratamientos para ser transformados en biosólidos y lograr determinar su uso sujeto a la clasificación que se presenta en Argentina, Chile y Colombia. Se realizó un análisis comparativo de los diferentes parámetros que se tienen en cuenta en los reglamentos de cada uno de estos países, evidenciando los cambios entre ellos. Fue posible identificar que Chile no presenta valores máximos de aplicación como los otros países, pero presenta un plan de aplicación. Respecto a Argentina y Colombia se percibe que varios de sus criterios presentan unos valores con una gran diferencia uno respecto al otro, además la normatividad argentina no tiene en cuenta los valores de Selenio en biosólidos, mientras que el reglamento colombiano maneja la normatividad US EPA.Producto Asociado al Proyecto de Investigación INV ING 2127 de la Vicerrectoría de Investigaciones de la UMNG

Impact of climate variability on N and C flux within the life cycle of biofuels produced from crop residues

Science.gov (United States)

Pourhashem, G.; Block, P. J.; Adler, P. R.; Spatari, S.

2013-12-01

Biofuels from agricultural feedstocks (lignocellulose) are under development to meet national policy objectives for producing domestic renewable fuels. Using crop residues such as corn stover as feedstock for biofuel production can minimize the risks associated with food market disruption; however, it demands managing residue removal to minimize soil carbon loss, erosion, and to ensure nutrient replacement. Emissions of nitrous oxide and changes to soil organic carbon (SOC) are subject to variability in time due to local climate conditions and cultivation practices. Our objective is to investigate the effect of climate inputs (precipitation and temperature) on biogeochemical greenhouse gas (GHG) emissions (N2O and SOC expressed as CO2) within the life cycle of biofuels produced from agricultural residues. Specifically, we investigate the impact of local climate variability on soil carbon and nitrogen fluxes over a 20-year biorefinery lifetime where biomass residue is used for lignocellulosic ethanol production. We investigate two cases studied previously (Pourhashem et al, 2013) where the fermentable sugars in the agricultural residue are converted to ethanol (biofuel) and the lignin byproduct is used in one of two ways: 1) power co-generation; or 2) application to land as a carbon/nutrient-rich amendment to soil. In the second case SOC losses are mitigated through returning the lignin component to land while the need for fertilizer addition is also eliminated, however in both cases N2O and SOC are subject to variability due to variable climate conditions. We used the biogeochemical model DayCent to predict soil carbon and nitrogen fluxes considering soil characteristics, tillage practices and local climate (e.g. temperature and rainfall). We address the impact of climate variability on the soil carbon and nitrogen fluxes by implementing a statistical bootstrap resampling method based on a historic data set (1980 to 2000). The ensuing probabilistic outputs from the

Structural characterization of glucosylated lactose derivatives synthesized by the Lactobacillus reuteri GtfA and Gtf180 glucansucrase enzymes.

Science.gov (United States)

Pham, Hien T T; Dijkhuizen, Lubbert; van Leeuwen, Sander S

2017-09-08

Glucansucrase enzymes from lactic acid bacteria are receiving strong interest because of their wide range of gluco-oligosaccharide and polysaccharide products from sucrose, some of which have prebiotic potential. Glucansucrases GtfA and Gtf180 from Lactobacillus reuteri strains are known to convert sucrose into α-glucans with different types of linkages, but also to use other molecules as acceptor substrates. Here we report that incubation of (N-terminally truncated versions of) these enzymes with lactose plus sucrose resulted in synthesis of at least 5 glucosylated lactose products of a degree of polymerization (DP) of 3-4. Only glucansucrase Gtf180-ΔN also produced larger lactose-based oligosaccharides (up to DP9). Structural characterization of the glucosylated lactose products DP3-4 revealed glycosidic bonds other than (α1→4)/(α1→6) typical for GtfA-ΔN and (α1→3)/(α1→6) typical for Gtf180-ΔN: Both GtfA-ΔN and Gtf180-ΔN now introduced a glucosyl residue (α1→3)- or (α1→4)-linked to the non-reducing galactose unit of lactose. Both enzymes also were able to introduce a glucosyl residue (α1→2)-linked to the reducing glucose unit of lactose. These lactose derived oligosaccharides potentially are interesting prebiotic compounds. Copyright © 2017 Elsevier Ltd. All rights reserved.

Lectin histochemistry of salivary glands in the giant ant-eater (Myrmecophaga tridactyla).

Science.gov (United States)

Meyer, W; Beyer, C; Wissdorf, H

1993-04-01

The submandibular and buccal glands of the Giant Ant-eater (Myrmecophaga tridactyla) have been studied by means of a series of carbohydrate histochemical methods, including a broad spectrum of PO-lectin procedures. The seromucous cells (Gl. submandibularis) and mucous cells (Gl. buccalis) of the glandular acini, as well as the secretion in the excretory duct system exhibited very strong to strong reactions for neutral and acidic glycoconjugates. The serous cells of the buccal glands and the excretory duct cells reacted rather weakly. The different controls applied particularly emphasized that sialoglycoconjugates are the predominant ingredients of the saliva secreted. Lectin histochemical differentiation demonstrated a varying pattern of saccharide residues in these substances. In the submandibular glands the glycoconjugates (mostly proteoglycans) of the seromucous cells and the luminal secretion normally contained terminal beta-galactose and minor contents of terminal alpha-N-acetylglucosamine. After sialidase digestion this cell type exhibited distinct amounts of sialic acid-beta-galactose and sialic acid-alpha-N-acetylgalactosamine. Sialic acid was also clearly present in the tough interlobular connective tissue. The buccal glands showed a similar distribution of saccharide residues in the mucous cells. In the serous cells, however, acidic glycoproteins with sialyl residues were observed, also containing terminal alpha-D-mannosyl, alpha-N-acetylgalactosaminyl, and beta-D-galactosyl residues. The cells of the excretory duct system of both gland types reacted weakly to moderately for terminal sugar residues (N-acetyl-D-glucosamine, N-acetyl-D-galactosamine, beta-D-galactose). The results obtained are discussed in view of the specific feeding mode of the Giant Ant-eater, whereby high contents of sialoglycoconjugates (proteoglycans, glycoproteins) produced by the salivary glands warrant for the main function of the non-sticky saliva; i.e., to act as an effective

Non-enzymatic N-acetylation of Lysine Residues by AcetylCoA Often Occurs via a Proximal S-acetylated Thiol Intermediate Sensitive to Glyoxalase II.

Science.gov (United States)

James, Andrew M; Hoogewijs, Kurt; Logan, Angela; Hall, Andrew R; Ding, Shujing; Fearnley, Ian M; Murphy, Michael P

2017-02-28

Acetyl coenzyme A (AcCoA), a key intermediate in mitochondrial metabolism, N-acetylates lysine residues, disrupting and, in some cases, regulating protein function. The mitochondrial lysine deacetylase Sirtuin 3 (Sirt3) reverses this modification with benefits reported in diabetes, obesity, and aging. We show that non-enzymatic lysine N-acetylation by AcCoA is greatly enhanced by initial acetylation of a cysteine residue, followed by SN-transfer of the acetyl moiety to a nearby lysine on mitochondrial proteins and synthetic peptides. The frequent occurrence of an S-acetyl intermediate before lysine N-acetylation suggests that proximity to a thioester is a key determinant of lysine susceptibility to acetylation. The thioesterase glyoxalase II (Glo2) can limit protein S-acetylation, thereby preventing subsequent lysine N-acetylation. This suggests that the hitherto obscure role of Glo2 in mitochondria is to act upstream of Sirt3 in minimizing protein N-acetylation, thus limiting protein dysfunction when AcCoA accumulates. Copyright © 2017 The Authors. Published by Elsevier Inc. All rights reserved.

40 CFR 180.235 - Dichlorvos; tolerances for residues.

Science.gov (United States)

2010-07-01

... Cattle, fat 0.02(N) Cattle, meat 0.02(N) Cattle, meat byproducts 0.02(N) Egg 0.05(N) Goat, fat 0.02(N) Goat, meat 0.02(N) Goat, meat byproducts 0.02(N) Horse, fat 0.02(N) Horse, meat 0.02(N) Horse, meat byproducts 0.02(N) Milk 0.02(N) Mushroom (residues expressed as naled) 0.5 Poultry, fat 0.05(N) Poultry, meat...

Wheat Yield Production Grown on Sandy Soil as Fertilized by Different N-Sources Using 15N-Technique

International Nuclear Information System (INIS)

Ismail, M. M.; Soliman, S. M.; El-Akel, E. A.; El-Sherbieny, A. E.; Awad, E. A. M.

2007-01-01

A pot experiment was carried out to evaluate the ability of some plant residues to meet total N demand of wheat crop in sandy soil and their performance to reduce chemical N fertilizer requirements. Residue-N sources, i.e. soybean and wheat residues were compared to ammonium sulfate as inorganic N source as well as mixtures of residue-N sources and (NH 4 )SO 4 in ratios of (3:1), (1:1) and (1:3), respectively. The nitrogen application rate in all amended pots was kept at 100 mg N pot -1 . The obtained results could be summarized as follows: 1) ry weight of straw and grains of wheat crop was significantly increased this at the addition of nitrogen sources as a result of N-uptake increased. The highest value was observed at the application treatment ratios of (1:1) and (1:3) on the basis of (residue: ammonium sulfate), which can be arranged in this order: Soybean > wheat + soybean > wheat residues. 2) he value of N derived from residues (Ndfr) and fertilizer (Ndff), as well as 15N -recovery ratios can be arranged in this order: Ammonium sulfate > soybean residue > Soybean + wheat residue > wheat residue. 3) he values indicated that 15N -labelled soybean residue in combination with ordinary, ammonium sulfate at the ratios of (*25: 75) and (*50: 50), respectively was found to be effective on 15N -recovery ratios in the straw and grains of wheat crop. 4) he present study indicates that the entire N requirements of wheat crop cannot be met by the separate application of any residue-N source examined.

Analysis of residual solvents in PET radiopharmaceuticals by GC

International Nuclear Information System (INIS)

Li Yungang; Zhang Xiaojun; Liu Jian; Tian Jiahe; Zhang Jinming

2013-01-01

The residual solvents in PET radiopharmaceuticals were analyzed by GC, which were acetonitrile, ethanol, N, N-dimethylethanolamine (DMEA), dimethylsulfoxide (DMSO). The standard curves were established with the AT-624 capillary column at GC, and the sensitivity of acetonitrile and ethanol were 0.004-0.320 g/L and 0.010-0.120 g/L respectively. The residual solvents of acetonitrile, ethanol, DMEA and DMSO in PET radio- pharmaceuticals were analyzed by GC. The linearity were 0.9994, 0.9999, 0.9997, 0.999 6 respectively. The residual of acetonitrile were (0.0313±0.0433), (0.0829±0.0668), (0.0156±0.0059), (0.0254±0.0266) g/L in 18 F-FDG, 18 F-FLT, 11 C-CFT, 11 C-PIB respectively. The residual of ethanol was (0.0505±0.00528) g/L in 18 F-FDG. The residual of DMSO were (0.0331±0.0180) g/L, (0.0238±0.0100) g/L in 18 F-W372 and 11 C-DTBZ respectively. The residual of DMEA was (0.0348±0.0022) g/L in 11 C-Choline. The survived of organic solvent in PET radiopharmaceuticals can be analyzed with GC directly. The results showed that the QC should be done in PET radiopharmaceuticals purity with semi-HPLC to avoid the high residual. (authors)

The metalloid arsenite induces nuclear export of Id3 possibly via binding to the N-terminal cysteine residues

International Nuclear Information System (INIS)

Kurooka, Hisanori; Sugai, Manabu; Mori, Kentaro; Yokota, Yoshifumi

2013-01-01

Highlights: •Sodium arsenite induces cytoplasmic accumulation of Id3. •Arsenite binds to closely spaced N-terminal cysteine residues of Id3. •N-terminal cysteines are essential for arsenite-induced nuclear export of Id3. •Nuclear export of Id3 counteracts its transcriptional repression activity. -- Abstract: Ids are versatile transcriptional repressors that regulate cell proliferation and differentiation, and appropriate subcellular localization of the Id proteins is important for their functions. We previously identified distinct functional nuclear export signals (NESs) in Id1 and Id2, but no active NES has been reported in Id3. In this study, we found that treatment with the stress-inducing metalloid arsenite led to the accumulation of GFP-tagged Id3 in the cytoplasm. Cytoplasmic accumulation was impaired by a mutation in the Id3 NES-like sequence resembling the Id1 NES, located at the end of the HLH domain. It was also blocked by co-treatment with the CRM1-specific nuclear export inhibitor leptomycin B (LMB), but not with the inhibitors for mitogen-activated protein kinases (MAPKs). Importantly, we showed that the closely spaced N-terminal cysteine residues of Id3 interacted with the arsenic derivative phenylarsine oxide (PAO) and were essential for the arsenite-induced cytoplasmic accumulation, suggesting that arsenite induces the CRM1-dependent nuclear export of Id3 via binding to the N-terminal cysteines. Finally, we demonstrated that Id3 significantly repressed arsenite-stimulated transcription of the immediate-early gene Egr-1 and that this repression activity was inversely correlated with the arsenite-induced nuclear export. Our results imply that Id3 may be involved in the biological action of arsenite

Isotopic measurements (C,N,O) of detonation soot produced from labeled and unlabeled Composition B-3 indicate source of solid carbon residues

Science.gov (United States)

Podlesak, David; Manner, Virginia; Amato, Ronald; Dattelbaum, Dana; Gusavsen, Richard; Huber, Rachel

2017-06-01

Detonation of HE is an exothermic process whereby metastable complex molecules are converted to simple stable molecules such as H2 O, N2, CO, CO2, and solid carbon. The solid carbon contains various allotropes such as detonation nanodiamonds, graphite, and amorphous carbon. It is well known that certain HE formulations such as Composition B (60% RDX, 40% TNT) produce greater amounts of solid carbon than other more oxygen-balanced formulations. To develop a greater understanding of how formulation and environment influence solid carbon formation, we synthesized TNT and RDX with 13 C and 15 N at levels slightly above natural abundance levels. Synthesized RDX and TNT were mixed at a ratio of 60:40 to form Composition B and solid carbon residues were collected from detonations of isotopically-labeled as well as un-labelled Composition B. The raw HE and detonation residues were analyzed isotopically for C, N, O isotopic compositions. We will discuss differences between treatments groups as a function of formulation and environment. LA-UR - 17-21266.

Ionic interaction of myosin loop 2 with residues located beyond the N-terminal part of actin probed by chemical cross-linking.

Science.gov (United States)

Pliszka, Barbara; Martin, Brian M; Karczewska, Emilia

2008-02-01

To probe ionic contacts of skeletal muscle myosin with negatively charged residues located beyond the N-terminal part of actin, myosin subfragment 1 (S1) and actin split by ECP32 protease (ECP-actin) were cross-linked with 1-ethyl-3-(3-dimethylaminopropyl)carbodiimide (EDC). We have found that unmodified S1 can be cross-linked not only to the N-terminal part, but also to the C-terminal 36 kDa fragment of ECP-actin. Subsequent experiments performed on S1 cleaved by elastase or trypsin indicate that the cross-linking site in S1 is located within loop 2. This site is composed of Lys-636 and Lys-637 and can interact with negatively charged residues of the 36 kDa actin fragment, most probably with Glu-99 and Glu-100. Cross-links are formed both in the absence and presence of MgATP.P(i) analog, although the addition of nucleotide decreases the efficiency of the cross-linking reaction.

Actinide recovery from pyrochemical residues

International Nuclear Information System (INIS)

Avens, L.R.; Clifton, D.G.; Vigil, A.R.

1984-01-01

A new process for recovery of plutonium and americium from pyrochemical waste has been demonstrated. It is based on chloride solution anion exchange at low acidity, which eliminates corrosive HCl fumes. Developmental experiments of the process flowsheet concentrated on molten salt extraction (MSE) residues and gave >95% plutonium and >90% americium recovery. The recovered plutonium contained 6 = from high chloride-low acid solution. Americium and other metals are washed from the ion exchange column with 1N HNO 3 -4.8M NaCl. The plutonium is recovered, after elution, via hydroxide precipitation, while the americium is recovered via NaHCO 3 precipitation. All filtrates from the process are discardable as low-level contaminated waste. Production-scale experiments are now in progress for MSE residues. Flow sheets for actinide recovery from electrorefining and direct oxide reduction residues are presented and discussed

Actinide recovery from pyrochemical residues

International Nuclear Information System (INIS)

Avens, L.R.; Clifton, D.G.; Vigil, A.R.

1985-05-01

We demonstrated a new process for recovering plutonium and americium from pyrochemical waste. The method is based on chloride solution anion exchange at low acidity, or acidity that eliminates corrosive HCl fumes. Developmental experiments of the process flow chart concentrated on molten salt extraction (MSE) residues and gave >95% plutonium and >90% americium recovery. The recovered plutonium contained 6 2- from high-chloride low-acid solution. Americium and other metals are washed from the ion exchange column with lN HNO 3 -4.8M NaCl. After elution, plutonium is recovered by hydroxide precipitation, and americium is recovered by NaHCO 3 precipitation. All filtrates from the process can be discardable as low-level contaminated waste. Production-scale experiments are in progress for MSE residues. Flow charts for actinide recovery from electro-refining and direct oxide reduction residues are presented and discussed

COMPARACIÓN DE LOS COMPONENTES DEL RENDIMIENTO EN VARIEDADES DE FRIJOL EN CONDICIONES DE ACIDEZ Y HUMEDAD RESIDUAL DEL SUELO EN EL SUR DE VERACRUZ

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Aurelio Morales Rivera

2015-10-01

Full Text Available El frijol negro (Phaseolus vulgaris L. se cultiva en suelos ácidos (pH<5 con humedad residual en el sur del estado de Veracruz, México. El cultivo se realiza en unas 6600 ha al final de la temporada de lluvias a mediados de septiembre o principios de octubre. La humedad residual, aunado a la acidez del suelo frecuentemente afectan el periodo de formación de la semilla, reduciendo el rendimiento. El presente trabajo tuvo como objetivo caracterizar variedades de frijol de tipo III en cuanto a su rendimiento de semilla y sus componentes, cultivadas bajo restricciones de humedad residual y acidez del suelo, y altas temperaturas en el ciclo otoño-invierno 2012-2013, en el Municipio de Juan Rodríguez Clara, Veracruz. Se emplearon seis variedades de testa de color negro, seis del tipo ‘Flor de Mayo’ y una del tipo ‘Flor de Junio’. El diseño experimental fue de bloques completos al azar con cuatro repeticiones. La unidad experimental se constituyó de cinco surcos de 5 m de longitud y 0.8 m de separación. Se fertilizó con una dosis de 40-40-00. Las variedades “Negro Veracruz”, “San Andrés”, “Negro Cotaxtla” y “Flor de Junio Marcela”, exhibieron mayor rendimiento de semilla, vainas por m2 y peso de 200 semillas, altura de planta y menor biomasa aérea final que las demás. El mayor rango de variabilidad genética entre las variedades se observó para la biomasa aérea final y altura de planta. La respuesta en rendimiento y sus componentes sugiere que algunas variedades de testa negra han desarrollado mecanismos de tolerancia a la acidez, restricción de humedad residual del suelo y altas temperaturas durante la floración y formación de la semilla, que les permiten producir altos rendimientos a pesar de estar sometidas a estrés ambiental. La variedad de Valles Altos (“Flor de Junio Marcela”, también mostró que podría tener buena adaptación a estas condiciones.

Identification of Residues Important for the Activity of Haloferax volcanii AglD, a Component of the Archaeal N-Glycosylation Pathway

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Lina Kaminski

2010-01-01

Full Text Available In Haloferax volcanii, AglD adds the final hexose to the N-linked pentasaccharide decorating the S-layer glycoprotein. Not knowing the natural substrate of the glycosyltransferase, together with the challenge of designing assays compatible with hypersalinity, has frustrated efforts at biochemical characterization of AglD activity. To circumvent these obstacles, an in vivo assay designed to identify amino acid residues important for AglD activity is described. In the assay, restoration of AglD function in an Hfx. volcanii aglD deletion strain transformed to express plasmid-encoded versions of AglD, generated through site-directed mutagenesis at positions encoding residues conserved in archaeal homologues of AglD, is reflected in the behavior of a readily detectable reporter of N-glycosylation. As such Asp110 and Asp112 were designated as elements of the DXD motif of AglD, a motif that interacts with metal cations associated with nucleotide-activated sugar donors, while Asp201 was predicted to be the catalytic base of the enzyme.

Quadratic residues and non-residues selected topics

CERN Document Server

Wright, Steve

2016-01-01

This book offers an account of the classical theory of quadratic residues and non-residues with the goal of using that theory as a lens through which to view the development of some of the fundamental methods employed in modern elementary, algebraic, and analytic number theory. The first three chapters present some basic facts and the history of quadratic residues and non-residues and discuss various proofs of the Law of Quadratic Reciprosity in depth, with an emphasis on the six proofs that Gauss published. The remaining seven chapters explore some interesting applications of the Law of Quadratic Reciprocity, prove some results concerning the distribution and arithmetic structure of quadratic residues and non-residues, provide a detailed proof of Dirichlet’s Class-Number Formula, and discuss the question of whether quadratic residues are randomly distributed. The text is a valuable resource for graduate and advanced undergraduate students as well as for mathematicians interested in number theory.

Quantifying biological nitrogen fixation of different catch crops, and residual effects of roots and tops on nitrogen uptake in barley using in-situ 15N labelling

DEFF Research Database (Denmark)

Li, Xiaoxi; Sørensen, Peter; Li, F C

2015-01-01

–46 % in macro-roots (0–18 cm soil). Macro-roots represented 31–50 % of total plant N. LBCCs showed similar capacity for soil N extraction as non-LBCCs. After incorporation of LBCC residues, the dry matter and N yields of spring barley were comparable to the effect of 50 kg N fertilisation ha−1, whereas no extra...

Wheat nitrogen fertilizer residues on an ultisol from the IX Region

International Nuclear Information System (INIS)

Rouanet M, Juan Luis; Pino N, Ines; Nario M, Adriana; Jobet, Claudio; Parada V, Ana Maria; Videla L, Ximena

2005-01-01

The soil nitrogen fertilizer residue is a relevant issue on a wheat production system at the IX Region of Chile, due to the high level of yield and use of resources, having an environmental impact from the use of fertilizer economy. The N-soil residue, not absorb by the plant, can be leach and contaminate the groundwater with nitrates or be redistributed by erosion. The application of isotopic techniques, using fertilizer labeled with 15 N, providing the quantitative information of the fate of this nutrient in the plant-soil system, important in the rate formulation based on the nitrogen use efficiency and in the benefit/cost relation. An assay was carried out in an Ultisol Metrenco Soil (Family fine, mixed, mesic, Typic Paleudults) at Pumalal locality. A Kumpa wheat variety was used, with a control treatment and five N rates applied as Urea labeled with 10% 15 N a.e., split in four times during the crop growth cycle. Total N (Kjeldhal) and 15 N optical emission spectrometer were determined in grain and straw samples harvested in February. Before to the next sow on may, soil sample were taken with an 3 cm diameter hugger (0-20; 20-40 and 40-60 cm depth). The samples were air dried, sieved and analyzed for total N and 15 N. The parameters determined for each depth were: N total (%), 15 N a.e. to obtain the plant-soil system N fertilizer recovery and its N residues in the soil profile. The wheat yield obtained was related with a cubic model using the N fertilizer rate applied (R 2 =0.75). The highest yield for the grain, 9.8 Mg ha -1 , was obtained applying 197 k ha -1 of N, with 45% of 15 N recovered by the grain. Nevertheless, the soil-crop system obtained a high 15 N recovery (>88%), in the soil remained 32-60% as N residue, being not used by the plant during the growth period. Between 27-54% of the 15 N total residue was found at the 0-20 cm soil depth, portion that is susceptible of distribution by erosion, implied in the use of fertilizer economy. Around 4

Prevalence, Predictors and Clinical Outcome of Residual Pulmonary Hypertension Following Tricuspid Annuloplasty.

Science.gov (United States)

Chen, Yan; Liu, Ju-Hua; Chan, Daniel; Sit, Ko-Yung; Wong, Chun-Ka; Ho, Kar-Lai; Ho, Lai-Ming; Zhen, Zhe; Lam, Yui-Ming; Lau, Chu-Pak; Au, Wing-Kok; Tse, Hung-Fat; Yiu, Kai-Hang

2016-07-22

Tricuspid annuloplasty is increasingly performed during left heart valve surgery, but the long-term clinical outcome postoperatively is not satisfactory. The aim of this study was to determine whether residual pulmonary hypertension (PHT) contributes to the adverse outcome. One-hundred thirty-seven patients (age 61±11 years; men, 30%) who underwent tricuspid annuloplasty during left-side valve surgery were enrolled. The mean pulmonary artery systolic pressure before surgery was 49±13 mm Hg and 32±15 mm Hg following surgery. Patients were divided into 3 groups according to postoperative pulmonary artery systolic pressure: no residual PHT (n=78, 57%), mild residual PHT (n=43, 31%), or significant residual PHT (n=16, 12%). A preoperative larger right ventricular (RV) geometry and tricuspid valve tethering area were associated with mild or significant residual PHT. A total of 24 adverse events (20 heart failures and 4 cardiovascular deaths) occurred during a median follow-up of 25 months. Kaplan-Meier survival curve demonstrated that patients with significant residual PHT had the highest percentage of adverse events followed by those with mild residual PHT. Patients with no residual PHT had a very low risk of adverse events. Multivariable Cox regression analysis revealed that both mild (hazard ratio=4.94; 95% CI =1.34-18.16; P=0.02) and significant residual PHT (hazard ratio=8.67; 95% CI =2.43-30.98; P<0.01) were independent factors associated with adverse events. The present study demonstrated that 43% of patients who underwent tricuspid annuloplasty had residual PHT. The presence of mild or significant residual PHT was associated with adverse events in these patients. © 2016 The Authors. Published on behalf of the American Heart Association, Inc., by Wiley Blackwell.

Chlorocholine chloride residue distribution in eggs, breast and ...

African Journals Online (AJOL)

The distribution of chlorocholine chloride (CCC) residue or its metabolites in the meat and eggs of laying hens was studied using the 15N delta value (d15N) and 15N atom % derived from 15N-CCC containing diets. In a completely randomised design, 20 laying hens were divided into four groups allocated four different ...

Strategies to reduce the environmental impact caused by the potential losses of N in soil amended with organic residues

International Nuclear Information System (INIS)

Lopez-Lopez, G.; Ibanez-Burgos, A. M.; Colombas, M.; Negree, A.; Reolid, C.; Lobo, M. C.; Sastre-Conde, I.

2009-01-01

For many years, nitrogen mineral fertilization has been regarded as a most highly productive and profitable farming practice. The downside, however, is represented by the negative environmental repercussions of its use. A potential source of N is found in organic residue, which has increased dramatically due to human activity. For instance, organic debris generated in urban areas and resulting rom intensive livestock breeding. (Author)

GlcNAc-1-P-transferase–tunicamycin complex structure reveals basis for inhibition of N-glycosylation

Energy Technology Data Exchange (ETDEWEB)

Yoo, Jiho; Mashalidis, Ellene H.; Kuk, Alvin C. Y.; Yamamoto, Kazuki; Kaeser, Benjamin; Ichikawa, Satoshi; Lee, Seok-Yong

2018-02-19

N-linked glycosylation is a predominant post-translational modification of protein in eukaryotes, and its dysregulation is the etiology of several human disorders. The enzyme UDP-N-acetylglucosamine:dolichyl-phosphate N-acetylglucosaminephosphotransferase (GlcNAc-1-P-transferase or GPT) catalyzes the first and committed step of N-linked glycosylation in the endoplasmic reticulum membrane, and it is the target of the natural product tunicamycin. Tunicamycin has potent antibacterial activity, inhibiting the bacterial cell wall synthesis enzyme MraY, but its usefulness as an antibiotic is limited by off-target inhibition of human GPT. Our understanding of how tunicamycin inhibits N-linked glycosylation and efforts to selectively target MraY are hampered by a lack of structural information. Here we present crystal structures of human GPT in complex with tunicamycin. In conclusion, structural and functional analyses reveal the difference between GPT and MraY in their mechanisms of inhibition by tunicamycin. We demonstrate that this difference could be exploited to design MraY-specific inhibitors as potential antibiotics.

Glyphosate Mineralization: Effect of Temperature and Soybean and Corn Crop Residues Mineralización de Glifosato: Efecto de la Temperatura y los Residuos Vegetales de Soya y Maíz

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Ariel Rampoldi

2008-03-01

Full Text Available Mineralization is the main mechanism of dissipation of glyphosate herbicide (N-[phosphonomethyl] glycine in soil. However, there is scarce information about the mineralization process in strata formed by stubbles in no-tillage systems. The kinetics and rate of mineralization of herbicide in stubbles of soybean (Glycine max L. Merr. and corn (Zea mays L. were investigated. To evaluate the effect of age of crop residues, samples of soybean stubbles were collected immediately after harvest (Soja 1 and four months after harvest (Soja 2. Corn crop residues were collected three months after harvest. Glyphosate evolution and total microbial activity (TMA were monitored by release of 14C-CO2 and C-CO2 under laboratory conditions with two temperatures, 15 and 28 ºC. Crop residues size was evaluated using grinding (1 mm and cut (1 to 2 cm stubbles. Results showed that glyphosate mineralization was affected by the incubation temperature and the origin and age of crop residues. Size of crop residues did not modify glyphosate mineralization. Average glyphosate mineralization after 56 days of incubation at 15 and 28 ºC was of 3.9 and 9.9%, respectively, of the 14C-glyphosate initially applied. In maize crop residues the percentages were 2.0 and 3.0%, respectively, at 15 and 28 ºC. A similar evolution was detected for TMA. The co-metabolic nature of glyphosate mineralization was corroborated. An inverse relation between C/N ratio and glyphosate mineralization was detected. Higher glyphosate mineralization was detected in fresh soybean stubbles, suggesting that applications on aged crop residues could increase the persistence of glyphosate in no-tillage systemsLa mineralización es el principal mecanismo de disipación del herbicida glifosato (N-[fosfonometil] glicina en el suelo. Existe escasa información sobre el proceso de mineralización de glifosato en el estrato formado por rastrojos en suelos cultivados en sistema de siembra directa. Las muestras de

Sugar-Binding Profiles of Chitin-Binding Lectins from the Hevein Family: A Comprehensive Study

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Yoko Itakura

2017-05-01

Full Text Available Chitin-binding lectins form the hevein family in plants, which are defined by the presence of single or multiple structurally conserved GlcNAc (N-acetylglucosamine-binding domains. Although they have been used as probes for chito-oligosaccharides, their detailed specificities remain to be investigated. In this study, we analyzed six chitin-binding lectins, DSA, LEL, PWM, STL, UDA, and WGA, by quantitative frontal affinity chromatography. Some novel features were evident: WGA showed almost comparable affinity for pyridylaminated chitotriose and chitotetraose, while LEL and UDA showed much weaker affinity, and DSA, PWM, and STL had no substantial affinity for the former. WGA showed selective affinity for hybrid-type N-glycans harboring a bisecting GlcNAc residue. UDA showed extensive binding to high-mannose type N-glycans, with affinity increasing with the number of Man residues. DSA showed the highest affinity for highly branched N-glycans consisting of type II LacNAc (N-acetyllactosamine. Further, multivalent features of these lectins were investigated by using glycoconjugate and lectin microarrays. The lectins showed substantial binding to immobilized LacNAc as well as chito-oligosaccharides, although the extents to which they bound varied among them. WGA showed strong binding to heavily sialylated glycoproteins. The above observations will help interpret lectin-glycoprotein interactions in histochemical studies and glyco-biomarker investigations.

Review of Alternative Management Options of Vegetable Crop Residues to Reduce Nitrate Leaching in Intensive Vegetable Rotations

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Laura Agneessens

2014-12-01

Full Text Available Vegetable crop residues take a particular position relative to arable crops due to often large amounts of biomass with a N content up to 200 kg N ha−1 left behind on the field. An important amount of vegetable crops are harvested during late autumn and despite decreasing soil temperatures during autumn, high rates of N mineralization and nitrification still occur. Vegetable crop residues may lead to considerable N losses through leaching during winter and pose a threat to meeting water quality objectives. However, at the same time vegetable crop residues are a vital link in closing the nutrient and organic matter cycle of soils. Appropriate and sustainable management is needed to harness the full potential of vegetable crop residues. Two fundamentally different crop residue management strategies to reduce N losses during winter in intensive vegetable rotations are reviewed, namely (i on-field management options and modifications to crop rotations and (ii removal of crop residues, followed by a useful and profitable application.

Effect of nitrogen fertilization and residue management practices on ammonia emissions from subtropical sugarcane production

Science.gov (United States)

mudi, Sanku Datta; Wang, Jim J.; Dodla, Syam Kumar; Arceneaux, Allen; Viator, H. P.

2016-08-01

Ammonia (NH3) emission from soil is a loss of nitrogen (N) nutrient for plant production as well as an issue of air quality, due to the fact that it is an active precursor of airborne particulate matters. Ammonia also acts as a secondary source of nitrous oxide (N2O) emission when present in the soil. In this study, the impacts of different sources of N fertilizers and harvest residue management schemes on NH3 emissions from sugarcane production were evaluated based on an active chamber method. The field experiment plots consisting of two sources of N fertilizer (urea and urea ammonium nitrate (UAN)) and two common residue management practices, namely residue retained (RR) and residue burned (RB), were established on a Commerce silt loam. The NH3 volatilized following N fertilizer application was collected in an impinger containing diluted citric acid and was subsequently analyzed using ion chromatography. The NH3 loss was primarily found within 3-4 weeks after N application. Average seasonal soil NH3 flux was significantly greater in urea plots with NH3-N emission factor (EF) twice or more than in UAN plots (2.4-5.6% vs. 1.2-1.7%). The RR residue management scheme had much higher NH3 volatilization than the RB treatment regardless of N fertilizer sources, corresponding to generally higher soil moisture levels in the former. Ammonia-N emissions in N fertilizer-treated sugarcane fields increased with increasing soil water-filled pore space (WFPS) up to 45-55% observed in the field. Both N fertilizer sources and residue management approaches significantly affected NH3 emissions.

Investigation of Unanticipated Alkylation at the N(π) Position of a Histidyl Residue Under Mitsunobu Conditions and Synthesis of Orthogonally Protected Histidine Analogues

Science.gov (United States)

Qian, Wenjian; Liu, Fa; Burke, Terrence R.

2011-01-01

We had previously reported that Mitsunobu-based introduction of alkyl substituents onto the imidazole N(π)-position of a key histidine residue in phosphothreonine-containing peptides can impart high binding affinity against the polo box domain of polo like kinase 1. Our current paper investigates the mechanism leading to this N(π)-alkylation and provides synthetic methodologies that permit the facile synthesis of histidine N(π)-modified peptides. These agents represent new and potentially important tools for biological studies. PMID:21950469

Recuperación de sílice residual de columnas de cromatografía en la síntesis sol-gel de pigmentos

Directory of Open Access Journals (Sweden)

Grañana, M. C.

2000-04-01

Full Text Available The use of a silica waste of support chromatography process as raw material in the synthesis of ceramic pigments based in zircon network (yellow of praseodymium, turkish blue of vanadium and pink koral of iron, is analized in this study. The synthesis has been carried out by ceramic method and also by colloidal sol-gel and coprecipitation routes. Silica waste becomes an effective precursor in the zircon ceramic stains. Likewise, the high temperature and long soaking time used in the synthesis ensure the whole combustion of adsorbed organics on the waste.

En este trabajo se caracteriza una sílice residual de procesos de cromatografía de columna y se analiza su utilización como precursor en la síntesis de los tres pigmentos triaxiales del circón (amarillo de praseodimio, turquesa de vanadio y coral de hierro utilizando tanto la vía sol-gel coloidal, la coprecipitación y el método cerámico. La sílice residual se muestra como un precursor muy efectivo en la obtención de los colores del circón tanto vía cerámica como a partir de geles. La alta temperatura así como los relativamente largos periodos de retención utilizados en la síntesis de los pigmentos cerámicos, permite una total combustión de los orgánicos adsorbidos sobre la sílice.

The Effect of Fucoidan from the Brown Alga Fucus evanescence on the Activity of α-N-Acetylgalactosaminidase of Human Colon Carcinoma Cells.

Science.gov (United States)

Bakunina, Irina; Chadova, Oksana; Malyarenko, Olesya; Ermakova, Svetlana

2018-05-10

α- N -acetylgalactosaminidase (EC 3.2.1.49) (alpha-NaGalase) catalyzes the hydrolysis of N -acetamido-2-deoxy-α-d-galactoside residues from non-reducing ends of various complex carbohydrates and glycoconjugates. It is known that human cancer cells express an alpha-NaGalase, which accumulates in the blood plasma of patients. The enzyme deglycosylates the Gc protein-derived macrophage activating factor (GcMAF) and inhibits macrophage activity acting as an immunosuppressor. The high specific activity 0.033 ± 0.002 μmol mg −1 min −1 of the enzyme was found in human colon carcinoma cells DLD-1. The alpha-NaGalase of DLD-1 cells was isolated and biochemical characterized. The enzyme exhibits maximum activity at pH 5.2 and temperature 55 °C. The K m is 2.15 mM, V max ⁻0.021 μmol min −1 mL −1 , k cat ⁻1.55 min −1 and k cat / K m ⁻0.72 min −1 mM −1 at 37 °C, pH 5.2. The effects of fucoidan from the brown alga Fucus evanescence on the activity of alpha-NaGalase in human colon carcinoma DLD-1 cells and on the biosynthesis of this enzyme were investigated. It was shown that fucoidan did not inhibit free alpha-NaGalase, however, it reduced the expression of the enzyme in the DLD-1 cells at IC 50 73 ± 4 μg mL −1 .

Transglycosylation reactions of Bacillus stearothermophilus maltogenic amylase with acarbose and various acceptors

International Nuclear Information System (INIS)

Hwa Park, K.; Jeong Kim, M.; Seob Lee, H.; Kim, D.; Soo Han, N.; Robyt, J.F.

1998-01-01

It was observed that Bacillus stearothermophilus maltogenic amylase cleaved the first glycosidic bond of acarbose to produce glucose and a pseudotrisaccharide (PTS) that was transferred to C-6 of the glucose to give an α-(1-6) glycosidic linkage and the formation of isoacarbose. The addition of a number of different carbohydrates to the digest gave transfer products in which PTS was primarily attached α-(1-6) to d-glucose, d-mannose, d-galactose, and methyl α-d-glucopyranoside. With d-fructopyranose and d-xylopyranose, PTS was linked α-(1-5) and α-(1-4), respectively. PTS was primarily transferred to C-6 of the nonreducing residue of maltose, cellobiose, lactose, and gentiobiose. Lesser amounts of α-(1-3) and/or α-(1-4) transfer products were also observed for these carbohydrate acceptors. The major transfer product to sucrose gave PTS linked α-(1-4) to the glucose residue. α,α-Trehalose gave two major products with PTS linked α-(1-6) and α-(1-4). Maltitol gave two major products with PTS linked α-(1-6) and α-(1-4) to the glucopyranose residue. Raffinose gave two major products with PTS linked α-(1-6) and α-(1-4) to the d-galactopyranose residue. Maltotriose gave two major products with PTS linked α-(1-6) and α-(1-4) to the nonreducing end glucopyranose residue. Xylitol gave PTS linked α-(1-5) as the major product and d-glucitol gave PTS linked α-(1-6) as the only product. The structures of the transfer products were determined using thin layer-chromatography, high-performance ion chromatography, enzyme hydrolysis, methylation analysis and 13 C NMR spectroscopy. The best acceptor was gentiobiose, followed closely by maltose and cellobiose, and the weakest acceptor was d-glucitol. (Copyright (c) 1998 Elsevier Science B.V., Amsterdam. All rights reserved.)

Transglycosylation reactions of Bacillus stearothermophilus maltogenic amylase with acarbose and various acceptors

Energy Technology Data Exchange (ETDEWEB)

Hwa Park, K; Jeong Kim, M; Seob Lee, H; Kim, D [Department of Food Science and Technology and Research Center for New Bio-Materials in Agriculture, Seoul National University, Suwon (Korea, Republic of); Soo Han, N; Robyt, J F [Laboratory for Carbohydrate Chemistry and Enzymology, Department of Biochemistry and Biophysics, Iowa State University, Ames, IA (United States)

1998-12-15

It was observed that Bacillus stearothermophilus maltogenic amylase cleaved the first glycosidic bond of acarbose to produce glucose and a pseudotrisaccharide (PTS) that was transferred to C-6 of the glucose to give an {alpha}-(1-6) glycosidic linkage and the formation of isoacarbose. The addition of a number of different carbohydrates to the digest gave transfer products in which PTS was primarily attached {alpha}-(1-6) to d-glucose, d-mannose, d-galactose, and methyl {alpha}-d-glucopyranoside. With d-fructopyranose and d-xylopyranose, PTS was linked {alpha}-(1-5) and {alpha}-(1-4), respectively. PTS was primarily transferred to C-6 of the nonreducing residue of maltose, cellobiose, lactose, and gentiobiose. Lesser amounts of {alpha}-(1-3) and/or {alpha}-(1-4) transfer products were also observed for these carbohydrate acceptors. The major transfer product to sucrose gave PTS linked {alpha}-(1-4) to the glucose residue. {alpha},{alpha}-Trehalose gave two major products with PTS linked {alpha}-(1-6) and {alpha}-(1-4). Maltitol gave two major products with PTS linked {alpha}-(1-6) and {alpha}-(1-4) to the glucopyranose residue. Raffinose gave two major products with PTS linked {alpha}-(1-6) and {alpha}-(1-4) to the d-galactopyranose residue. Maltotriose gave two major products with PTS linked {alpha}-(1-6) and {alpha}-(1-4) to the nonreducing end glucopyranose residue. Xylitol gave PTS linked {alpha}-(1-5) as the major product and d-glucitol gave PTS linked {alpha}-(1-6) as the only product. The structures of the transfer products were determined using thin layer-chromatography, high-performance ion chromatography, enzyme hydrolysis, methylation analysis and {sup 13}C NMR spectroscopy. The best acceptor was gentiobiose, followed closely by maltose and cellobiose, and the weakest acceptor was d-glucitol. (Copyright (c) 1998 Elsevier Science B.V., Amsterdam. All rights reserved.)

Evaluación del efecto residual del temephos en larvas de Aedes aegypti en Lima, Perú

OpenAIRE

Palomino S, Miriam; Centro Nacional de Salud Pública, Instituto Nacional de Salud. Lima, Perú.; Solari, Lely; Centro Nacional de Salud Pública, Instituto Nacional de Salud. Lima, Perú. Hospital Nacional Hipólito Unánue. Lima, Perú.; León C, Walter; Centro Nacional de Salud Pública, Instituto Nacional de Salud. Lima, Perú.; Vega H, Rosario; Centro Nacional de Control de Calidad, Instituto Nacional de Salud. Lima, Perú.; Vergaray C, Máximo; Centro Nacional de Control de Calidad, Instituto Nacional de Salud. Lima, Perú.; Cubillas, Luis; Dirección de Salud Lima Norte III, Ministerio de Salud. Lima, Perú.; Mosqueda C, Rosa; Centro Nacional de Control de Calidad, Instituto Nacional de Salud. Lima, Perú.; García A, Norma; Centro Nacional de Control de Calidad, Instituto Nacional de Salud. Lima, Perú.

2006-01-01

El temephos ha sido usado como la única estrategia de control para Aedes aegypti en Lima durante los últimos años. Objetivo: Evaluar la eficacia residual de temephos para el control de Ae. aegypti en condiciones de campo y laborato - rio en Lima, Perú. Materiales y métodos: Se eligieron ocho tanques bajos de concreto (TBC) depósitos predominan - temente infestados con Ae. aegypti en el distrito de San Juan de Lurigancho, situado al norte del área suburbana de Lima. Se cuantificó el número de ...

Synthetic and mechanistic insight into nosylation of glycine residues

DEFF Research Database (Denmark)

Stuhr-Hansen, Nicolai; Sølling, Theis Ivan; Strømgaard, Kristian

2013-01-01

The Fukuyama-Mitsunobu alkylation procedure is widely used to introduce alkyl substituents to amino groups in general and N-alkylation of peptides in particular. Here we have investigated the procedure in detail for N-alkylation of peptides with N-terminal glycine residues, based on the observati...

Nitrous Oxide Emission and Denitrifier Abundance in Two Agricultural Soils Amended with Crop Residues and Urea in the North China Plain.

Directory of Open Access Journals (Sweden)

Jianmin Gao

Full Text Available The application of crop residues combined with Nitrogen (N fertilizer has been broadly adopted in China. Crop residue amendments can provide readily available C and N, as well as other nutrients to agricultural soils, but also intensify the N fixation, further affecting N2O emissions. N2O pulses are obviously driven by rainfall, irrigation and fertilization. Fertilization before rainfall or followed by flooding irrigation is a general management practice for a wheat-maize rotation in the North China Plain. Yet, little is known on the impacts of crop residues combined with N fertilizer application on N2O emission under high soil moisture content. A laboratory incubation experiment was conducted to investigate the effects of two crop residue amendments (maize and wheat, individually or in combination with N fertilizer, on N2O emissions and denitrifier abundance in two main agricultural soils (one is an alluvial soil, pH 8.55, belongs to Ochri-Aquic Cambosols, OAC, the other is a lime concretion black soil, pH 6.61, belongs to Hapli-Aquic Vertosols, HAV under 80% WFPS (the water filled pore space in the North China Plain. Each type soil contains seven treatments: a control with no N fertilizer application (CK, N0, 200 kg N ha-1 (N200, 250 kg N ha-1 (N250, maize residue plus N200 (MN200, maize residue plus N250 (MN250, wheat residue plus N200 (WN200 and wheat residue plus N250 (WN250. Results showed that, in the HAV soil, MN250 and WN250 increased the cumulative N2O emissions by 60% and 30% compared with N250 treatment, respectively, but MN200 and WN200 decreased the cumulative N2O emissions by 20% and 50% compared with N200. In the OAC soil, compared with N200 or N250, WN200 and WN250 increased the cumulative N2O emission by 40%-50%, but MN200 and MN250 decreased the cumulative N2O emission by 10%-20%. Compared with CK, addition of crop residue or N fertilizer resulted in significant increases in N2O emissions in both soils. The cumulative N2O

Computational comparison of β-mannosidases of animals, humans, microbes, and plants

OpenAIRE

SAMRA, Zahoor Qadir; ATHAR, Muhammad Amin

2011-01-01

The b-mannosidase (MANB) enzyme is involved in removing mannose residue from the nonreducing end, and its impaired activity leads to b-mannosidosis. MANB amino acid sequences of humans, other mammals, plants, fungi, and bacteria were compared to determine their similarities, differences, and predicted 3D structures. Our cloned MANB DNA sequence showed a 99% similarity to a previously reported human MANB DNA sequence but 16 nucleotide differences were observed, showing the polymorphic nature o...

Computational comparison of β-mannosidases of animals, humans, microbes, and plants

OpenAIRE

SAMRA, Zahoor Qadir; ATHAR, Muhammad Amin

2014-01-01

The b-mannosidase (MANB) enzyme is involved in removing mannose residue from the nonreducing end, and its impaired activity leads to b-mannosidosis. MANB amino acid sequences of humans, other mammals, plants, fungi, and bacteria were compared to determine their similarities, differences, and predicted 3D structures. Our cloned MANB DNA sequence showed a 99% similarity to a previously reported human MANB DNA sequence but 16 nucleotide differences were observed, showing the polymorphic nature o...

Crop residue decomposition, residual soil organic matter and nitrogen mineralization in arable soils with contrasting textures

NARCIS (Netherlands)

Matus, F.J.

1994-01-01

To evaluate the significance of cropping, soil texture and soil structure for the decomposition of ¹⁴C- and ¹⁵N-labelled crop residues, a study was conducted in a sand and a

Transmission of H7N9 Influenza Viruses with a Polymorphism at PB2 Residue 627 in Chickens and Ferrets

Science.gov (United States)

Luk, Geraldine S. M.; Leung, Connie Y. H.; Sia, Sin Fun; Choy, Ka-Tim; Zhou, Jie; Ho, Candy C. K.; Cheung, Peter P. H.; Lee, Elaine F.; Wai, Chris K. L.; Li, Pamela C. H.; Ip, Sin-Ming; Poon, Leo L. M.; Lindsley, William G.

2015-01-01

ABSTRACT Poultry exposure is a major risk factor for human H7N9 zoonotic infections, for which the mode of transmission remains unclear. We studied the transmission of genetically related poultry and human H7N9 influenza viruses differing by four amino acids, including the host determinant PB2 residue 627. A/Silkie chicken/HK/1772/2014 (SCk1772) and A/HK/3263/14 (HK3263) replicated to comparable titers in chickens, with superior oropharyngeal over cloacal shedding; both viruses transmitted efficiently among chickens via direct contact but inefficiently via the airborne route. Interspecies transmission via the airborne route was observed for ferrets exposed to the SCk1772- or HK3263-infected chickens, while low numbers of copies of influenza viral genome were detected in the air, predominantly at particle sizes larger than 4 μm. In ferrets, the human isolate HK3263 replicated to higher titers and transmitted more efficiently via direct contact than SCk1772. We monitored “intrahost” and “interhost” adaptive changes at PB2 residue 627 during infection and transmission of the Sck1772 that carried E627 and HK3263 that carried V/K/E polymorphism at 60%, 20%, and 20%, respectively. For SCk1772, positive selection for K627 over E627 was observed in ferrets during the chicken-to-ferret or ferret-to-ferret transmission. For HK3263 that contained V/K/E polymorphism, mixed V627 and E627 genotypes were transmitted among chickens while either V627 or K627 was transmitted to ferrets with a narrow transmission bottleneck. Overall, our results suggest direct contact as the main mode for H7N9 transmission and identify the PB2-V627 genotype with uncompromised fitness and transmissibility in both avian and mammalian species. IMPORTANCE We studied the modes of H7N9 transmission, as this information is crucial for developing effective control measures for prevention. Using chicken (SCk1772) and human (HK3263) H7N9 isolates that differed by four amino acids, including the host

Residual diesel measurement in sand columns after surfactant/alcohol washing

International Nuclear Information System (INIS)

Martel, R.; Gelinas, P.J.

1996-01-01

A new simple gravimetric technique has been designed to determine residual oil saturation of complex hydrocarbon mixtures (e.g., diesel) in sand column experiments because reliable methods are lacking. The He/N 2 technique is based on drying of sand columns by circulating helium gas to drag oil droplets in a cold trap (liquid nitrogen). With this technique, residual diesel measurement can be performed easily immediately after alcohol/surfactant washing and in the same lab. For high residual diesel content in Ottawa sand (25 to 30 g/kg), the technique is much more accurate (± 2% or 600 mg/kg) than the standard analytical methods for the determination of mineral oil and grease. The average relative error on partial diesel dissolution in sand column estimated after alcohol/surfactant flooding (residual saturation of 10 to 15 g/kg) is as low as 5%. The precision of the He/N 2 technique is adequate to compare relative efficiency of washing solutions when partial extraction of residual oil in Ottawa sand columns is performed. However, this technique is not adapted for determination of traces of oil in sediment or for environmental control of contaminated soils. Each diesel determination by the He/N 2 technique costs less than $8 in chemical products (helium and liquid nitrogen). A simple laboratory drying setup can be built for less than $400 which makes this technique valuable for diesel analyses when a large number of tests are required

Gasificación con aire en lecho fluidizado de los residuos sólidos del proceso industrial de la naranja//Air gasification in fluidized bed of solid residue the orange industrial process

Directory of Open Access Journals (Sweden)

Leonardo Aguiar-Trujillo

2012-12-01

Full Text Available La industria procesadora de la naranja genera elevados volúmenes de residuos sólidos. Este residuo se ha utilizado en la alimentación animal y en procesos bioquímicos; pero no se ha aprovechado a través de la gasificación. El objetivo del trabajo fue determinar el aporte energético por medio del proceso de gasificación, realizándose estudios de los residuos sólidos de naranja, utilizando aire en reactor de lecho fluidizado burbujeante (variando la temperatura de gasificación, relación estequiométrica y altura del lecho. En el proceso se utilizó un diseño de experimento factorial completo de 2k, valorando la influencia de las variables independientes y sus interacciones en las respuestas, con un grado de significación del 95 %. Se obtuvieron los parámetros para efectuar el proceso de gasificación de los residuos sólidos de naranja, obteniendo un gas de bajo poder calórico, próximo a 5046 kJ/m3N, demostrando sus cualidades para su aprovechamiento energético.Palabras claves: gasificación con aire, lecho fluidizado, residuo de naranja._______________________________________________________________________________AbstractThe orange industrial process generates high volumes of solid residue. This residue has been used as complement in the animal feeding and biochemical processes; but it has not taken advantage through of the gasification process. The objective of the work was to determine the energy contribution by means ofthe gasification process, were carried out studies of the orange solid residue, using air in reactor of bubbling fluidized bed (varying the gasification temperature, air ratio and bed height. In the process a design of complete factorial experiment of 2k, was used, valuing the influence of the independent variables and its interactions in the answers, using a confidence level of 95 %. Were obtained the parameters to make the process of gasification of the orange solid residue, obtaining a gas of lower heating

Residual volume in vials of antibiotics used in pediatrics.

Science.gov (United States)

Chaves, Caroline Magna Pessoa; Bezerra, Carolina Martins; Lima, Francisca Elisângela Teixeira; Cardoso, Maria Vera Lúcia Moreira Leitão; Fonseca, Said Gonçalves da Cruz; Silva, Viviane Martins da

2017-06-12

Quantifying residual volume contained in vials of antibiotics used in pediatrics. This is an experiment involving samples from vials of antibiotics used in a pediatric hospital. Residual volume was identified by calculating the difference in weight measurement before and after the vials were washed. Evaluation of the residual volume difference in the vials was determined by the Wilcoxon non-parametric test for a sample and established at a significance level of 5%. 105 samples of antibiotics were selected. The correct use of the antibiotics oxacillin (88.57%) and ceftriaxone (94.28%) predominated with low residual values. The same did not occur for procaine benzylpenicillin + potassium benzylpenicillin, since a greater residual volume was discarded in 74.28% of the vials. We highlight the need for improvements in managing antibiotics in the institution under study, so that the excess volume of the antibiotics in the vials is used within the acceptable stable time. It is also necessary that the disposal of the residual volume be adequately disposed, since it presents a risk to public health and the environment. Quantificar o volume residual contido em frascos-ampola de antibióticos utilizados na pediatria. Trata-se de um experimento com amostras de frascos-ampola de antibióticos utilizados em hospital pediátrico. O volume residual foi identificado calculando-se a diferença da aferição do peso antes e após a lavagem do frasco-ampola. A avaliação da diferença dos volumes residuais nos frascos-ampola foi determinada pelo teste não paramétrico de Wilcoxon para uma amostra e estabelecido o nível de significância de 5%. Foram selecionadas 105 amostras de antibióticos. Predominou o correto aproveitamento dos antibióticos oxacilina (88,57%) e ceftriaxona (94,28%), com baixos valores residuais. O mesmo não ocorreu com a benzilpenicilina procaína + potássica, pois em 74,28% dos frascos houve descarte de volume residual superior. Destaca-se a necessidade de

Systematic Review of Uit Parameters on Residual Stresses of Sensitized AA5456 and Field Based Residual Stress Measurements for Predicting and Mitigating Stress Corrosion Cracking

Science.gov (United States)

2014-03-01

University Press, 2009, pp. 820–824. [30] S. Kou, Welding Metallurgy , 2nd ed. Hoboken, NJ: John Wiley and Sons, Inc., 2003. [31] M. N.James et al...around welds in aluminum ship structures both in the laboratory and in the field. Tensile residual stresses are often generated during welding and, in...mitigate and even reverse these tensile residual stresses. This research uses x-ray diffraction to measure residual stresses around welds in AA5456 before

Separation and identification of Se-methylselenogalactosamine - a new metabolite in basal human urine - by HPLC-ICP-MS and CE-nano-ESI-(MS)(2)

DEFF Research Database (Denmark)

Bendahl, L.; Gammelgaard, Bente

2004-01-01

Three minor metabolites were isolated from human urine. Two of these were identified by nano electrospray ionisation mass spectrometry (nESI-MS) as Se-methylseleno-N-acetylglucosamine and Se-methylselenogalactosamine, respectively. A human urine pool was lyophilised and reconstituted in methanol......-chromatographed in the reversed phase system and further purified in different separation systems before analysis by nESI-MS. By CE-nESI-MS analysis of one of the fractions, the characteristic selenium pattern was recognized around m/z 285 and ( MS) 2 fragmentation resulted in a fragments at m/z 267, 173 and 155, respectively....... It was not possible to identify this selenium compound on basis of the available data. The selenium compound in the second fraction showed co-elution with a Se-methylseleno-N-acetylglucosamine standard. The identity of this compound was verified by nESI-MS after further purification by size exclusion chromatography...

Irradiation and modified atmosphere packaging effects on residual nitrite, ascorbic acid, nitrosomyoglobin, and color in sausage.

Science.gov (United States)

Ahn, Hyun-Joo; Jo, Cheorun; Lee, Ju-Woon; Kim, Jae-Hyun; Kim, Kee-Hyuk; Byun, Myung-Woo

2003-02-26

The present study was undertaken to evaluate the irradiation and modified atmosphere packaging effects on emulsion-type cooked pork sausage during storage for 4 weeks. CO(2) (100%), N(2) (100%), or 25% CO(2)/75% N(2) packaged sausage were irradiated at 0, 5, and 10 kGy, and residual nitrite, residual ascorbic acid, nitrosomyoglobin (NO-Mb), color values, and their correlation were observed. Irradiation significantly reduced the residual nitrite content and caused partial reduction of NO-Mb during storage. No difference was observed in ascorbic acid content by irradiation. Irradiation decreased the Hunter color a value of sausage. CO(2) or CO(2)/N(2) packaging were more effective for reducing residual nitrite and inhibiting the loss of the red color of sausage compared to N(2) packaging. Results indicated that the proper combination of irradiation and modified atmosphere packaging could reduce the residual nitrite in sausage with minimization of color change.

Transglycosidase-like activity of Mucor hiemalis endoglycosidase mutants enabling the synthesis of glycoconjugates using a natural glycan donor.

Science.gov (United States)

Sakaguchi, Kouta; Katoh, Toshihiko; Yamamoto, Kenji

2016-11-01

Glycan conversion of glycoprotein via the transglycosylation activity of endo-β-N-acetylglucosaminidase is a promising chemoenzymatic technology for the production of glycoproteins including bio-medicines with a homogeneous glycoform. Although Endo-M is a key enzyme in this process, its product undergoes rehydrolysis, which leads to a lower yield, and limits the practical application of this enzyme. We developed several Endo-M mutant enzymes including N175Q with glycosynthase-like activity and/or transglycosidase-like activity. We found that the Endo-M N175H mutant showed glycosynthase-like activity comparable to N175Q as well as transglycosidase-like activity superior to N175Q. Using a natural sialylglycopeptide as a donor substrate, N175H readily transferred the sialo-glycan onto an N-acetylglucosamine residue attached to bovine ribonuclease B (RNase B), yielding a nonnative sialoglycosylated RNase B. These results demonstrate that use of Endo-M N175H is an alternative glycoengineering technique, which provides a relatively high yield of transglycosylation product and avoids the laborious synthesis of a sugar oxazoline as a donor substrate. © 2015 International Union of Biochemistry and Molecular Biology, Inc.

Decomposition of rice residue in tropical soils, 2

International Nuclear Information System (INIS)

Yoneyama, Tadakatsu; Yoshida, Tomio

1977-01-01

The decomposition processes of intact rice residue (leaf blades) in the Maahas soil in the Philippines were investigated. Three sets of beakers simulating both lowland and upland conditions were incubated in the dark at 30 deg. C. One set of beakers had neither rice residue nor fertilizer. Pieces of leaf blades weighing 204 mg (dry weight) were inserted in the second set. Pieces of leaf blades were inserted in the third set, and 200 ppm of fertilizer nitrogen as 15 N-labelled ammonium sulfate was added. The experiment dealt with the nitrogen immobilization by rice residue under lowland and upland conditions. The rice residue which has contained low nitrogen absorbed nitrogen from the soil and from the added fertilizer (ammonium sulfate) during its decomposition under both conditions. Under the lowland condition, the amount of nitrogen immobilized was small during the first week, but became large after 2 or 3 weeks. Under the upland condition, the immobilized nitrogen reached its maximum during the first week, but the amount was not so large as that under the lowland condition. The added fertilizer stimulated the decrease of weight of the rice residue in the early incubation period, but retarded it later under both conditions. The absorption of fertilizer by the rice residue ceased at the early stage of residue decomposition, but the nitrogen content of the residue continued to increase. (Iwakiri, K.)

Síndrome de Tako-Tsubo em decorrência de bloqueio neuromuscular residual: relato de caso Síndrome de Tako-Tsubo como consecuencia de bloqueo neuromuscular residual: relato de caso Tako-Tsubo syndrome secondary to residual neuromuscular blockade: case report

Directory of Open Access Journals (Sweden)

Marcos Guilherme Cunha Cruvinel

2008-12-01

Full Text Available JUSTIFICATIVA E OBJETIVOS: A síndrome de Tako-Tsubo é uma complicação pós-operatória rara, com mortalidade em torno de 5%. O objetivo deste relato é apresentar o bloqueio neuromuscular residual como fator desencadeante da referida síndrome, discutir sobre a mesma e alertar sobre o bloqueio neuromuscular residual. RELATO DO CASO: Paciente do sexo feminino, 61 anos, estado físico ASA I, submetida à anestesia geral associada a bloqueio paravertebral cervical para reparo artroscópico de lesão de manguito rotator. Após extubação foi evidenciado bloqueio neuromuscular residual por meio do exame clínico. Na sala de recuperação pós-anestésica evoluiu com sonolência, taquicardia, hipertensão arterial e acidose respiratória grave. Após a reintubação, evoluiu com parada cardíaca em atividade elétrica sem pulso, revertida com adrenalina e massagem cardíaca externa. Apresentou no pós-operatório elevação de segmento ST, aumento de troponina e acinesia de segmento médio-apical de ventrículo esquerdo com fração de ejeção estimada em 30%. A cineangiocoronariografia mostrou coronárias isentas de ateromatose significativa e grave comprometimento da função sistólica com acinesia inferior e ântero-septo-apical com hipercontratilidade compensatória de suas porções basais. Com o tratamento instituído houve recuperação funcional completa. CONCLUSÕES: O bloqueio neuromuscular residual associado à paralisia diafragmática e possível atelectasia pulmonar levando a insuficiência respiratória, hipercapnia e descarga adrenérgica foram os fatores desencadeantes da síndrome de Tako-Tsubo com sua grave repercussão clínica.JUSTIFICATIVA Y OBJETIVOS: El Síndrome de Tako-Tsubo es una complicación postoperatoria rara con una mortalidad en torno de un 5%. El objetivo de este relato es presentar el bloqueo neuromuscular residual como factor desencadenante del referido síndrome, discutir sobre él y alertar sobre el bloqueo

Residue-and-polymer-free graphene transfer: DNA-CTMA/graphene/GaN bio-hybrid photodiode for light-sensitive applications

Science.gov (United States)

Reddy, M. Siva Pratap; Park, Herie; Lee, Jung-Hee

2018-02-01

In this work, we present a residue-and-polymer-free graphene transfer method by using the adhesive force between graphene and a target substrate, the hydrophobic property of graphene, and the surface tension of the solutions. We used an n-type GaN substrate as the target substrate to make a photodiode (PD). Recently, the inclusion of biomolecules in photodetection technology has attracted considerable attention in the electronics and photonics research, particularly due to the rapid evolution of organic-inorganic bio-hybrid PDs (Bio-HPDs). This report presents a significant photoresponse of the bioinspired graphene-based PD fabricated with deoxyribonucleic acid-cetyltrimetylammonium chloride (DNA-CTMA) biomolecules on the n-type GaN substrate. Bio-HPDs respond to the infrared, visible, and ultraviolet wavelengths. Moreover, the Bio-HPDs show photosensitivities (Iphoto/Idark) of 21, 143, and 1194 for infrared, visible, and ultraviolet wavebands, respectively, which can be attributed to the integration of high-mobility graphene and photosensitive DNA-CTMA biomolecules. In addition, the corresponding charge transfer mechanisms in the PDs are explained by energy band diagrams.

Determination of protein global folds using backbone residual dipolar coupling and long-range NOE restraints

International Nuclear Information System (INIS)

Giesen, Alexander W.; Homans, Steve W.; Brown, Jonathan Miles

2003-01-01

We report the determination of the global fold of human ubiquitin using protein backbone NMR residual dipolar coupling and long-range nuclear Overhauser effect (NOE) data as conformational restraints. Specifically, by use of a maximum of three backbone residual dipolar couplings per residue (N i -H N i , N i -C' i-1 , H N i - C' i-1 ) in two tensor frames and only backbone H N -H N NOEs, a global fold of ubiquitin can be derived with a backbone root-mean-square deviation of 1.4 A with respect to the crystal structure. This degree of accuracy is more than adequate for use in databases of structural motifs, and suggests a general approach for the determination of protein global folds using conformational restraints derived only from backbone atoms

Effect of Residue Nitrogen Concentration and Time Duration on Carbon Mineralization Rate of Alfalfa Residues in Regions with Different Climatic Conditions

Directory of Open Access Journals (Sweden)

saeid shafiei

2017-08-01

Full Text Available Introduction Various factors like climatic conditions, vegetation, soil properties, topography, time, plant residue quality and crop management strategies affect the decomposition rate of organic carbon (OC and its residence time in soil. Plant residue management concerns nutrients recycling, carbon recycling in ecosystems and the increasing CO2 concentration in the atmosphere. Plant residue decomposition is a fundamental process in recycling of organic matter and elements in most ecosystems. Soil management, particularly plant residue management, changes soil organic matter both qualitatively and quantitatively. Soil respiration and carbon loss are affected by soil temperature, soil moisture, air temperature, solar radiation and precipitation. In natural agro-ecosystems, residue contains different concentrations of nitrogen. It is important to understand the rate and processes involved in plant residue decomposition, as these residues continue to be added to the soil under different weather conditions, especially in arid and semi-arid climates. Material and methods Organic carbon mineralization of alfalfa residue with different nitrogen concentrations was assessed in different climatic conditions using split-plot experiments over time and the effects of climate was determined using composite analysis. The climatic conditions were classified as warm-arid (Jiroft, temperate arid (Narab and cold semi-arid (Sardouiyeh using cluster analysis and the nitrogen (N concentrations of alfalfa residue were low, medium and high. The alfalfa residue incubated for four different time periods (2, 4, 6 and 8 months. The dynamics of organic carbon in different regions measured using litter bags (20×10 cm containing 20 g alfalfa residue of 2-10 mm length which were placed on the soil surface. Results and discussion The results of this study showed that in a warm-arid (Jiroft, carbon loss and the carbon decomposition rate constant were low in a cold semi

Residual gravimetric method to measure nebulizer output.

Science.gov (United States)

Vecellio None, Laurent; Grimbert, Daniel; Bordenave, Joelle; Benoit, Guy; Furet, Yves; Fauroux, Brigitte; Boissinot, Eric; De Monte, Michele; Lemarié, Etienne; Diot, Patrice

2004-01-01

The aim of this study was to assess a residual gravimetric method based on weighing dry filters to measure the aerosol output of nebulizers. This residual gravimetric method was compared to assay methods based on spectrophotometric measurement of terbutaline (Bricanyl, Astra Zeneca, France), high-performance liquid chromatography (HPLC) measurement of tobramycin (Tobi, Chiron, U.S.A.), and electrochemical measurements of NaF (as defined by the European standard). Two breath-enhanced jet nebulizers, one standard jet nebulizer, and one ultrasonic nebulizer were tested. Output produced by the residual gravimetric method was calculated by weighing the filters both before and after aerosol collection and by filter drying corrected by the proportion of drug contained in total solute mass. Output produced by the electrochemical, spectrophotometric, and HPLC methods was determined after assaying the drug extraction filter. The results demonstrated a strong correlation between the residual gravimetric method (x axis) and assay methods (y axis) in terms of drug mass output (y = 1.00 x -0.02, r(2) = 0.99, n = 27). We conclude that a residual gravimetric method based on dry filters, when validated for a particular agent, is an accurate way of measuring aerosol output.

Residual Resistance Data from Cavity Production Projects at Jefferson Lab

International Nuclear Information System (INIS)

Ciovati, Gianluigi; Geng, Rongli; Mammosser, John; Saunders, Jeffrey

2010-01-01

A fundamental limitation towards achieving high quality factors in superconducting radio-frequency cavities is the so-called residual resistance. Understanding and controlling the residual resistance has important implications towards improving the efficiency and reduce the operating cost of continuous wave superconducting linear accelerators. In this contribution we will report on the residual resistance values obtained from measurements of the quality factor of a large set of cavities, with resonant frequency between 805 MHz and 1.5 GHz, all of them processed and tested at Jefferson Lab. Surface treatments included both buffered chemical polishing and electropolishing. The results indicate an approximate value of the residual resistance of about 7-10 n Omega.

Measurement of conformational constraints in an elastin-mimetic protein by residue-pair selected solid-state NMR

International Nuclear Information System (INIS)

Hong, Mei; McMillan, R. Andrew; Conticello, Vincent P.

2002-01-01

We introduce a solid-state NMR technique for selective detection of a residue pair in multiply labeled proteins to obtain site-specific structural constraints. The method exploits the frequency-offset dependence of cross polarization to achieve 13 CO i → 15 N i → 13 Cα i transfer between two residues. A 13 C, 15 N-labeled elastin mimetic protein (VPGVG) n is used to demonstrate the method. The technique selected the Gly3 Cα signal while suppressing the Gly5 Cα signal, and allowed the measurement of the Gly3 Cα chemical shift anisotropy to derive information on the protein conformation. This residue-pair selection technique should simplify the study of protein structure at specific residues

Residues of tritium-labeled morantel in lactating dairy cattle

International Nuclear Information System (INIS)

Lynch, M.J.; Mosher, F.R.; Burnett, D.M.; Newby, T.J.

1987-01-01

Residues of morantel and its metabolites were monitored in plasma, urine, and milk of five lactating dairy cattle that received an oral dose of [4,4-pyrimidyl- 3 H 2 ]morantel tartrate at 10 mg/kg. Drug-related radioactivity peaked in plasma at 8 h and in milk by the second milking, postdose, and was 170 and 84 ng/mL, respectively. The fraction of total residues in milk convertible to the marker compound, N-methyl-1,3-propanediamine, was 0.38 on the basis of a comparison of the areas under the curves for total and marker residues. Five days after dosing, 3.9% of the total radioactivity in liver was recovered as tritium water. Total drug-related residues in this target tissue averaged 1.15 μg/g. About half of the drug-related residues in liver was unextractable and was classified by bound

Synthesis, optical properties and residual strain effect of GaN nanowires generated via metal-assisted photochemical electroless etching

KAUST Repository

Najar, Adel

2017-04-18

Herein, we report on the studies of GaN nanowires (GaN NWs) prepared via a metal-assisted photochemical electroless etching method with Pt as the catalyst. It has been found that etching time greatly influences the growth of GaN NWs. The density and the length of nanowires increased with longer etching time, and excellent substrate coverage was observed. The average nanowire width and length are around 35 nm and 10 μm, respectively. Transmission electron microscopy (TEM) shows a single-crystalline wurtzite structure and is confirmed by X-ray measurements. The synthesis mechanism of GaN NWs using the metal-assisted photochemical electroless etching method was presented. Photoluminescence (PL) measurements of GaN NWs show red-shift PL peaks compared to the as-grown sample associated with the relaxation of compressive stress. Furthermore, a shift of the E2 peak to the lower frequency in the Raman spectra for the samples etched for a longer time confirms such a stress relaxation. Based on Raman measurements, the compressive stress σxx and the residual strain εxx were evaluated to be 0.23 GPa and 2.6 × 10−4, respectively. GaN NW synthesis using a low cost method might be used for the fabrication of power optoelectronic devices and gas sensors.

Processivity and Subcellular Localization of Glycogen Synthase Depend on a Non-catalytic High Affinity Glycogen-binding Site*

OpenAIRE

Díaz, Adelaida; Martínez-Pons, Carlos; Fita, Ignacio; Ferrer, Juan C.; Guinovart, Joan J.

2011-01-01

Glycogen synthase, a central enzyme in glucose metabolism, catalyzes the successive addition of α-1,4-linked glucose residues to the non-reducing end of a growing glycogen molecule. A non-catalytic glycogen-binding site, identified by x-ray crystallography on the surface of the glycogen synthase from the archaeon Pyrococcus abyssi, has been found to be functionally conserved in the eukaryotic enzymes. The disruption of this binding site in both the archaeal and the human muscle glycogen synth...

Standardized Approach to Quantitatively Measure Residual Limb Skin Health in Individuals with Lower Limb Amputation.

Science.gov (United States)

Rink, Cameron L; Wernke, Matthew M; Powell, Heather M; Tornero, Mark; Gnyawali, Surya C; Schroeder, Ryan M; Kim, Jayne Y; Denune, Jeffrey A; Albury, Alexander W; Gordillo, Gayle M; Colvin, James M; Sen, Chandan K

2017-07-01

Objective: (1) Develop a standardized approach to quantitatively measure residual limb skin health. (2) Report reference residual limb skin health values in people with transtibial and transfemoral amputation. Approach: Residual limb health outcomes in individuals with transtibial ( n  = 5) and transfemoral ( n  = 5) amputation were compared to able-limb controls ( n  = 4) using noninvasive imaging (hyperspectral imaging and laser speckle flowmetry) and probe-based approaches (laser doppler flowmetry, transcutaneous oxygen, transepidermal water loss, surface electrical capacitance). Results: A standardized methodology that employs noninvasive imaging and probe-based approaches to measure residual limb skin health are described. Compared to able-limb controls, individuals with transtibial and transfemoral amputation have significantly lower transcutaneous oxygen tension, higher transepidermal water loss, and higher surface electrical capacitance in the residual limb. Innovation: Residual limb health as a critical component of prosthesis rehabilitation for individuals with lower limb amputation is understudied in part due to a lack of clinical measures. Here, we present a standardized approach to measure residual limb health in people with transtibial and transfemoral amputation. Conclusion: Technology advances in noninvasive imaging and probe-based measures are leveraged to develop a standardized approach to quantitatively measure residual limb health in individuals with lower limb loss. Compared to able-limb controls, resting residual limb physiology in people that have had transfemoral or transtibial amputation is characterized by lower transcutaneous oxygen tension and poorer skin barrier function.

Fluidised-bed combustion of gasification residue

Energy Technology Data Exchange (ETDEWEB)

Korpela, T.; Kudjoi, A.; Hippinen, I.; Heinolainen, A.; Suominen, M.; Lu Yong [Helsinki Univ. of Technology (Finland). Lab of Energy Economics and Power Plant Engineering

1996-12-01

Partial gasification processes have been presented as possibilities for future power production. In the processes, the solid materials removed from a gasifier (i.e. fly ash and bed material) contain unburnt fuel and the fuel conversion is increased by burning this gasification residue either in an atmospheric or a pressurised fluidised-bed. In this project, which is a part of European JOULE 2 EXTENSION research programme, the main research objectives are the behaviour of calcium and sulphur compounds in solids and the emissions of sulphur dioxide and nitrogen oxides (NO{sub x} and N{sub 2}O) in pressurised fluidised-bed combustion of gasification residues. (author)

Temperature dependence of the residual stresses and mechanical properties in TiN/CrN nano-layered coatings processed by cathodic arc deposition

International Nuclear Information System (INIS)

Lomello, F.; Arab Pour Yazdi; Sanchette, F.; Schuster, F.; Tabarant, M.; Billard, A.

2014-01-01

Nano-layered TiN-CrN coatings were synthesized by cathodic arc deposition (CAD) on M2 tool steel substrates. The aim of this study was to establish a double-correlation between the influence of the bilayer period and the deposition temperature on the resulting mechanical-tribological properties. The superlattice hardening enhancement was observed in samples deposited at different temperatures - i.e. without additional heating, 300 C and 400 C. Nonetheless, the residual compressive stresses are believed to be the responsible for reducing the hardness enhancement when the deposition temperature was increased. For instance, sample deposited without additional heating presented a hardness of 48.5 ± 1.3 GPa, while by increasing the processing temperature up to 400 C it was reduced down to 31.2 ± 4.1 GPa due to the stress relaxation. Indeed, the sample deposited at low temperature which possesses the thinnest bilayer period (13 nm) exhibited better mechanical properties. On the contrary, the role of the interfaces introduced when the period is decreased seems to rule the wear resistance. (authors)

Residual stresses

International Nuclear Information System (INIS)

Sahotra, I.M.

2006-01-01

The principal effect of unloading a material strained into the plastic range is to create a permanent set (plastic deformation), which if restricted somehow, gives rise to a system of self-balancing within the same member or reaction balanced by other members of the structure., known as residual stresses. These stresses stay there as locked-in stresses, in the body or a part of it in the absence of any external loading. Residual stresses are induced during hot-rolling and welding differential cooling, cold-forming and extruding: cold straightening and spot heating, fabrication and forced fitting of components constraining the structure to a particular geometry. The areas which cool more quickly develop residual compressive stresses, while the slower cooling areas develop residual tensile stresses, and a self-balancing or reaction balanced system of residual stresses is formed. The phenomenon of residual stresses is the most challenging in its application in surface modification techniques determining endurance mechanism against fracture and fatigue failures. This paper discusses the mechanism of residual stresses, that how the residual stresses are fanned and what their behavior is under the action of external forces. Such as in the case of a circular bar under limit torque, rectangular beam under limt moment, reclaiming of shafts welds and peening etc. (author)

Effects of rapeseed residue on lead and cadmium availability and uptake by rice plants in heavy metal contaminated paddy soil.

Science.gov (United States)

Ok, Yong Sik; Usman, Adel R A; Lee, Sang Soo; Abd El-Azeem, Samy A M; Choi, Bongsu; Hashimoto, Yohey; Yang, Jae E

2011-10-01

Rapeseed (Brassica napus L.) has been cultivated for biodiesel production worldwide. Winter rapeseed is commonly grown in the southern part of Korea under a rice-rapeseed double cropping system. In this study, a greenhouse pot experiment was conducted to assess the effects of rapeseed residue applied as a green manure alone or in combinations with mineral N fertilizer on Cd and Pb speciation in the contaminated paddy soil and their availability to rice plant (Oryza sativa L.). The changes in soil chemical and biological properties in response to the addition of rapeseed residue were also evaluated. Specifically, the following four treatments were evaluated: 100% mineral N fertilizer (N100) as a control, 70% mineral N fertilizer+rapeseed residue (N70+R), 30% mineral N fertilizer+rapeseed residue (N30+R) and rapeseed residue alone (R). The electrical conductivity and exchangeable cations of the rice paddy soil subjected to the R treatment or in combinations with mineral N fertilizer treatment, N70+R and N30+R, were higher than those in soils subjected to the N100 treatment. However, the soil pH value with the R treatment (pH 6.3) was lower than that with N100 treatment (pH 6.9). Use of rapeseed residue as a green manure led to an increase in soil organic matter (SOM) and enhanced the microbial populations in the soil. Sequential extraction also revealed that the addition of rapeseed residue decreased the easily accessible fraction of Cd by 5-14% and Pb by 30-39% through the transformation into less accessible fractions, thereby reducing metal availability to the rice plant. Overall, the incorporation of rapeseed residue into the metal contaminated rice paddy soils may sustain SOM, improve the soil chemical and biological properties, and decrease the heavy metal phytoavailability. Copyright © 2011 Elsevier Ltd. All rights reserved.

Ferrochelatase from Rhodopseudomonas sphaeroides: substrate specificity and role of sulfhydryl and arginyl residues

International Nuclear Information System (INIS)

Dailey, H.A.; Fleming, J.E.; Harbin, B.M.

1986-01-01

Purified ferrochelatase from the bacterium Rhodopseudomonas sphaeroides was examined to determine the roles of cationic and sulfhydryl residues in substrate binding. Reaction of the enzyme sulfhydryl residues with N-ethylmaleimide or monobromobimane resulted in a rapid loss of enzyme activity. Ferrous iron, but not porphyrin substrate, had a protective effect against inactivation by these two reagents. Quantitation with 3 H-labeled N-ethylmaleimide revealed that inactivation required one to two sulfhydryl groups to be modified. Modification of arginyl residues with either 2,3-butanedione or camphorquinone 10-sulfonate resulted in a loss of ferrochelatase activity. A kinetic analysis of the modified enzyme showed that the K/sub m/ for ferrous iron was not altered but that the K/sub m/ for the prophyrin substrate was increased. These data suggested that arginyl residues may be involved in porphyrin binding, possibly via charge pair interactions between the arginyl residue and the anionic porphyrin propionate side chain. Modification of lysyl residues had no effect on enzyme activity. The authors also examined the ability of bacterial ferrochelatase to use various 2,4-disubstituted porphyrins as substrates. The authors found that 2,4-bis-acetal- and 2,4-disulfonate deuteroporphyrins were effective substrates for the purified bacterial enzyme and that N-methylprotoporphyrin was an effective inhibitor of the enzyme. Data for the ferrochelatase of R. sphaeroides are compared with previously published data for the eucaryotic enzyme

Identification of Residues Important for the Activity of Haloferax volcanii AglD, a Component of the Archaeal N-Glycosylation Pathway

OpenAIRE

Kaminski, Lina; Eichler, Jerry

2010-01-01

In Haloferax volcanii, AglD adds the final hexose to the N-linked pentasaccharide decorating the S-layer glycoprotein. Not knowing the natural substrate of the glycosyltransferase, together with the challenge of designing assays compatible with hypersalinity, has frustrated efforts at biochemical characterization of AglD activity. To circumvent these obstacles, an in vivo assay designed to identify amino acid residues important for AglD activity is described. In the assay, restoration of AglD...

The residual proton-neutron interaction and nuclear collectivity

International Nuclear Information System (INIS)

Casten, R.F.

1990-01-01

The essential role of the valence, residual p-n interaction in the development of collectivity, though long known in general terms, has recently become increasingly apparent. A brief review of the p-n interaction is given, including some very basic nuclear data that illustrate its effects and the phenomenological N p N n scheme and the P-factor. This is followed by a discussion of recent experimental extractions of p-n matrix elements throughout the periodic table and theoretical efforts to understand them, in terms of both Shell and Nilsson models. 20 refs., 13 figs

PRODUCCIÓN DE ELECTRICIDAD EN CELDAS DE COMBUSTIBLE MICROBIANAS UTILIZANDO AGUA RESIDUAL: EFECTO DE LA DISTANCIA ENTRE ELECTRODOS

Directory of Open Access Journals (Sweden)

Germán Buitrón

2011-01-01

Full Text Available Se evaluó la influencia de la separación de electrodos sobre la producción de electricidad y la eliminación de materia orgánica en celdas de combustible microbianas usando agua residual. Para ello se construyeron tres celdas de geometría semejante pero con diferente volumen. En promedio, se obtuvo una eficiencia de eliminación de materia orgánica del 71%. La duración del ciclo fue de 0.97 días para la celda de 40 mL, 1.03 días para la celda de 80 mL y 5.93 días para la celda de 120 mL. El aumento de distancia entre los electrodos (4, 8 y 12 cm no causó un efecto negativo en la generación de electricidad, pues en la mayor separación (celda de 120 mL se alcanzó un voltaje máximo de 660 mV, mientras que para las celdas de 40 y 80 mL fue de 540 mV y 532 mV, respectivamente. La densidad de potencia máxima se presentó en la celda con separación de 12 cm (408 mW/m2. Sin embargo, se observó que la potencia volumétrica disminuyó a medida que aumentó la separación entre los electrodos.

Field evaluation of N2 fixation by mung bean in the Philippines, and residual effects on maize

International Nuclear Information System (INIS)

Rosales, C.M.; Rivera, F.G.; Hautea, R.A.; Del Rosario, E.

1998-01-01

Seventeen genotypes of mung bean (Vigna radiata) were screened for growth, yield, and symbiotic N 2 fixation during the late-dry (March-May) and early-dry (October-December) seasons of 1992 at the University of the Philippines at Los Banos (UPLB). The 15 N-dilution method was used to determine amounts of N fixed. Soil mineral N availability was higher (average 22 kg N/ha) in the late- than in the early-dry season (9.2 kg N/ha), and, possibly in consequence, vegetative growth was better in the late- than in the early-dry season; however, in contrast, seed yields were better in the latter. Cultivar Pagasa 5 had the highest value (52 kg N/ha) for fixed N in the late-dry season, whereas PAEC 3 had the highest value (70 kg N/ha) in the early-dry season; Accession 2041 had the lowest values in both seasons (33 and 26 kg N/ha, respectively). Genetic variability, albeit slight, was observed for total N fixed, but not for percent N derived from fixation (%Ndfa). Further field work at UPLB and at the Philippine Nuclear Research Institute (PNRI), Quezon City, investigated five mung genotypes, including three from the previous trials, for yield N 2 fixation and residual effects on subsequent maize (Zea mays). Estimates for %Ndfa and for amounts of N fixed ranged from 64 to 87% and 43 to 85 kg N/ha, respectively, at PNRI, and from 37 to 72% and 21 to 85 kg N/ha, respectively, at UPLB. The highest mung-bean seed yields obtained were 1.99 t/ha at PNRI and 0.86 t/ha at UPLB in the two locations. When maize was planted after mung, dry matter, seed yields and total N were consistently higher than when planted after maize or cotton, although most of the differences fell short of statistical significance. The data are discussed in terms of genetic diversity for yield and N 2 fixation in these soils, and potential to exploit mung-fixed N to improve cereal yields

Rhizosphere biodegradation of xenobiotics: Microbiological study of a rice field polluted by oil refinery residues

Energy Technology Data Exchange (ETDEWEB)

Rasolomanana, J.L.; Balandreau, J.

1987-07-01

A rice field had been studied in which the disposal of oil residues from a refinery plant seemed to improve rice growth and soil N content. To check the hypothesis that nitrogen fixation by oil-adapted bacteria could explain this observation we isolated and studied dominant diazotrophic bacteria from the rhizosphere of an actively N/sub 2/-fixing rice plant growing on the polluted soil; for this purpose we used an axenic plant as an enrichment step. The rhizosphere did not contain more than 10/sup 5/ N/sub 2/-fixing bacteria per g dry soil, essentially Bacillus polymyxa; one of the isolates, strain R3 could grow and reduce C/sub 2/H/sub 2/ on oil residues only in the presence of glucose or of exudates from an axenic plant (spermosphere model); the presence of R3 diminished the inhibition of rice growth due to the oil residues; R3 nitrogenase activity in the rhizosphere of rice was increased in the presence of these residues. This cometabolism of oil residues in the presence of exudates and their stimulating effect on N/sub 2/ fixation provide a likely explanation for observed positive effects of the disposal of oil residues on arable lands, and are conducive to the hypothesis that rhizosphere cometabolism could greatly enhance soil organic matter turn over and humification rates.

The Soil-Water Characteristic Curve of Unsaturated Tropical Residual Soil

Science.gov (United States)

Yusof, M. F.; Setapa, A. S.; Tajudin, S. A. A.; Madun, A.; Abidin, M. H. Z.; Marto, A.

2016-07-01

This study was conducted to determine the SWCC of unsaturated tropical residual soil in Kuala Lumpur, Malaysia. Undisturbed soil samples at five locations of high-risk slopes area were taken at a depth of 0.5 m using block sampler. In the determination of the SWCC, the pressure plate extractor with the capacity of 1500 kN/m2 has been used. The index properties of the soil such as natural moisture content, Atterberg limits, specific gravity, and soil classification are performed according to BS 1377: Part 2: 1990. The results of index properties show that the natural moisture content of the soil is between 36% to 46%, the plasticity index is between 10% - 26%, the specific gravity is between 2.51 - 2.61 and the soils is classified as silty organic clay of low plasticity. The SWCC data from the pressure plate extractor have been fitted with the Fredlund and Xing equation. The results show that the air entry value and residual matric suction for residual soils are in the range of 17 kN/m2 to 24 kN/m2 and 145 kN/m2 to 225 kN/m2 respectively. From the fitting curve, it is found that the average value of the Fredlund and Xing parameters such as a, n and m are in the range of 0.24-0.299, 1.7-4.8 and 0.142-0.440 respectively.

Interception of residual nitrate from a calcareous alluvial soil profile on the North China Plain by deep-rooted crops: A 15N tracer study

International Nuclear Information System (INIS)

Ju, X.T.; Gao, Q.; Christie, P.; Zhang, F.S.

2007-01-01

15 N-labeled nitrate was injected into different depths of an alluvial calcareous soil profile on the North China Plain. Subsequent movement of NO 3 - N and its recovery by deep-rooted maize (Zea mays L.) and shallow-rooted eggplant (Solanum melongena L.) were studied. Under conventional water and nutrient management the mean recoveries of 15 N-labeled nitrate from K 15 NO 3 injected at depths 15, 45, and 75 cm were 22.4, 13.8, and 7.8% by maize and 7.9, 4.9, and 2.7% by eggplant. The recovery rate by maize at each soil depth was significantly higher than by eggplant. The deeper the injection of nitrate the smaller the distance of its downward movement and this corresponded with the movement of soil water during crop growth. Deeper rooting crops with high root length density and high water consumption may therefore be grown to utilize high concentrations of residual nitrate in the subsoil from previous intensive cropping and to protect the environment. - Deep-rooted crops have a greater capacity than shallow-rooted crops to intercept residual nitrate from the subsoil and restrict its movement down to the shallow groundwater

Residual stresses

International Nuclear Information System (INIS)

Macherauch, E.

1978-01-01

Residual stresses are stresses which exist in a material without the influence of external powers and moments. They come into existence when the volume of a material constantly changes its form as a consequence of mechanical, thermal, and/or chemical processes and is hindered by neighbouring volumes. Bodies with residual stress are in mechanical balance. These residual stresses can be manifested by means of all mechanical interventions disturbing this balance. Acoustical, optical, radiological, and magnetical methods involving material changes caused by residual stress can also serve for determining residual stress. Residual stresses have an ambivalent character. In technical practice, they are feared and liked at the same time. They cause trouble because they can be the cause for unexpected behaviour of construction elements. They are feared since they can cause failure, in the worst case with catastrophical consequences. They are appreciated, on the other hand, because, in many cases, they can contribute to improvements of the material behaviour under certain circumstances. But they are especially liked for their giving convenient and (this is most important) mostly uncontrollable explanations. For only in very few cases we have enough knowledge and possibilities for the objective evaluation of residual stresses. (orig.) [de

Inhibition of severe acute respiratory syndrome coronavirus replication in a lethal SARS-CoV BALB/c mouse model by stinging nettle lectin, Urtica dioica agglutinin

Science.gov (United States)

Kumaki, Yohichi; Wandersee, Miles K.; Smith, Aaron J.; Zhou, Yanchen; Simmons, Graham; Nelson, Nathan M.; Bailey, Kevin W.; Vest, Zachary G.; Li, Joseph K.-K.; Chan, Paul Kay-Sheung; Smee, Donald F.; Barnard, Dale L.

2011-01-01

replication was partially characterized. When UDA was exposed to N-acetylglucosamine and then UDA was added to cells just prior to adsorption, UDA did not inhibit the virus infection. These data support the conclusion that UDA might bind to N-acetylglucosamine-like residues present on the glycosylated envelope glycoproteins, thereby preventing virus attachment to cells. PMID:21338626

Fertilizer nitrogen recovery efficiencies in crop production systems of China with and without consideration of the residual effect of nitrogen

International Nuclear Information System (INIS)

Yan, Xiaoyuan; Ti, Chaopu; Zhu, Zhaoliang; Vitousek, Peter; Chen, Deli; Leip, Adrian; Cai, Zucong

2014-01-01

China is the world’s largest consumer of synthetic nitrogen (N), where very low rates of fertilizer N recovery in crops have been reported, raising discussion around whether fertilizer N use can be significantly reduced without yield penalties. However, using recovery rates as indicator ignores a possible residual effect of fertilizer N—a factor often unknown at large scales. Such residual effect might store N in the soil increasing N availability for subsequent crops. The objectives of the present study were therefore to quantify the residual effect of fertilizer N in China and to obtain more realistic rates of the accumulative fertilizer N recovery efficiency (RE) in crop production systems of China. Long-term spatially-extensive data on crop production, fertilizer N and other N inputs to croplands in China were used to analyze the relationship between crop N uptake and fertilizer N input (or total N input), and to estimate the amount of residual fertilizer N. Measurement results of cropland soil N content in two time periods were obtained to compare the change in the soil N pool. At the provincial scale, it was found that there is a linear relationship between crop N uptake and fertilizer N input or total N input. With the increase in fertilizer N input, annual direct fertilizer N RE decreased and was indeed low (below 30% in recent years), while its residual effect increased continuously, to the point that 40–68% of applied fertilizer was used for crop production sooner or later. The residual effect was evidenced by a buildup of soil N and a large difference between nitrogen use efficiencies of long-term and short-term experiments. (paper)

Contribution of Eucalyptus Harvest Residues and Nitrogen Fertilization to Carbon Stabilization in Ultisols of Southern Bahia

Directory of Open Access Journals (Sweden)

Fernanda Cristina Caparelli Oliveira

2018-02-01

Full Text Available ABSTRACT: Eucalyptus forests in southern Bahia (BA are planted in soils with a sandy surface layer and humid tropical climate, conditions that lead to soil carbon (C decomposition. Recent studies have shown that nitrogen (N may be important for soil C stabilization. The aim of this study was to evaluate the contribution of Eucalyptus harvest residues and nitrogen fertilization to C stabilization in Ultisols of southern BA. The experiment was conducted in Eucalyptus clonal plantations cultivated in two regions of Eunápolis, BA, Brazil, with different clay content: southern region (140 g kg-1 of clay and western region (310 g kg-1 of clay. Five treatments were evaluated: one control (CTR, without Eucalyptus harvest residues and N fertilization, and four treatments with harvest residues combined with four rates of N fertilization: 0, 25, 50, and 100 kg ha-1. Soil samples were collected from the 0.00-0.10, 0.10-0.20, 0.20-0.40, and 0.40-0.60 m layers at the beginning and the end of the experiment (36 months. The amount of C and N and the C and N isotopic ratio (δ13C and δ15N of particulate organic matter (POM and mineral-associated organic matter (MAOM were determined. In the southern region after 36 months, the C-MAOM stocks in the 0.00-0.10 m layer of the CTR decreased by 33 %. The addition of harvest residue followed by 100 kg ha-1 N increased C-POM and N-POM stocks (0.00-0.10 m compared to the CTR, and the final N-POM stocks and residue-C recovery in the surface soil layer were positively correlated with the increase in N fertilization rates. In the western region, residue maintenance resulted in increased C-MAOM stocks (0.00-0.10 m compared to the CTR, but an increase in N availability reduced this increment. The increase in N fertilization rates did not alter C stocks, but reduced N stocks of POM and MAOM in the upper soil layer. At the end of the experiment, N fertilizer recovery (0.00-0.60 m was similar among the regions evaluated. In

Nitrogen washing from C3 and C4 cover grasses residues by rain

Directory of Open Access Journals (Sweden)

Ciro Antonio Rosolem

2010-12-01

Full Text Available Crop species with the C4 photosynthetic pathway are more efficient in assimilating N than C3 plants, which results in different N amounts prone to be washed from its straw by rain water. Such differences may affect N recycling in agricultural systems where these species are grown as cover crops. In this experiment, phytomass production and N leaching from the straw of grasses with different photosynthetic pathways were studied in response to N application. Pearl millet (Pennisetum glaucum and congo grass (Brachiaria ruziziensis with the C4 photosynthetic pathway, and black oat (Avena Strigosa and triticale (X Triticosecale, with the C3 photosynthetic pathway, were grown for 47 days. After determining dry matter yields and N and C contents, a 30 mm rainfall was simulated over 8 t ha-1 of dry matter of each plant residue and the leached amounts of ammonium and nitrate were determined. C4 grasses responded to higher fertilizer rates, whereas N contents in plant tissue were lower. The amount of N leached from C4 grass residues was lower, probably because the C/N ratio is higher and N is more tightly bound to organic compounds. When planning a crop rotation system it is important to take into account the difference in N release of different plant residues which may affect N nutrition of the subsequent crop.

Use of Bio-Organic Fertilizers to Develop N Uptake Using 15N Technique

International Nuclear Information System (INIS)

Galal, Y.G.M.

2008-01-01

Experimental work either in field scale or in green house conditions were conducted using 15 N technique to evaluate the role of different bio fertilizers and different plant residues as organic amendments on enhancement of plant N nutrition. Nitrogen fixation by a symbiotic bacteria has been observed in greenhouse and field experiments under dry land cropping systems. Biological N 2 fixation associated with crop residues (legumes or cereals) was investigated in pot experiments with wheat and chickpea cultivars. In these experiments, labelled wheat and rice straw were used as organic N sources in comparison with either 15 N-labelled ammonium sulfate or ammonium nitrate as chemical nitrogen fertilizers. Rhizobium inoculation extended to be used with wheat gave the best results of N uptake and N 2 fixation when combined with Azospirillum brasilense as heterotrophic diazotrophs. The nitrogen uptake by wheat plants was significantly increased by application of soybean residues and inoculation with Azospirillum brasilense. From the field trial we can conclude that soybean residue as enriched N material, and Azospirillum brasilense inoculation enhanced N yields of wheat cultivars grown in poor fertile sandy soil

Involvement of tyrosine residues, N-terminal amino acids, and beta-alanine in insect cuticular sclerotization.

Science.gov (United States)

Andersen, Svend Olav

2007-09-01

During sclerotization of insect cuticle the acyldopamines, N-acetyldopamine (NADA) and N-beta-alanyldopamine (NBAD), are oxidatively incorporated into the cuticular matrix, thereby hardening and stabilizing the material by forming crosslinks between the proteins in the cuticular matrix and by forming polymers filling the intermolecular spaces in the cuticle. Sclerotized cuticle from the locust, Schistocerca gregaria, and the beetle, Tenebrio molitor, was hydrolyzed in dilute hydrochloric acid, and from the hydrolysates some components presumably degradation products of cuticular crosslinks were isolated. In two of the components, the sidechain of 3,4-dihydroxyacetophenone was linked to the amino groups of glycine and beta-alanine, respectively, and in the third component to the phenolic group of tyrosine. These three compounds, glycino-dihydroxyacetophenone, beta-alanino-dihydroxyacetophenone, and O-tyrosino-dihydroxyacetophenone, as well as the previously reported compound, lysino-dihydroxyacetophenone [Andersen, S.O., Roepstorff, P., 2007. Aspects of cuticular sclerotization in the locust, Schistocerca gregaria, and the beetle, Tenebrio molitor. Insect Biochem. Mol. Biol. 37, 223-234], are suggested to be degradation products of cuticular crosslinks, in which amino acid residues formed linkages to both the alpha- and beta-positions of the sidechain of acyldopamines.

Initial Tensile and Residual Forces of Pigmented Elastomeric Ligatures from Various Brands

Science.gov (United States)

Wichai, Wassana; Anuwongnukroh, Niwat; Dechkunakorn, Surachai; Kaypetch, Rattiporn; Tua-ngam, Peerapong

2017-11-01

This study aimed to investigate the initial tensile and residual forces of pigmented elastomeric ligatures (clear, pink, and metallic) from three commercial brands - Brand 1 (USA), Brand 2 (USA), and Brand 3(China). Twelve elastomeric ligatures of each brand and color were evaluated for initial tensile and residual forces after stretching for 28 days at 37°C by a Universal Testing Machine. The results showed that the highest initial tensile force was 14.78 N, 20.71 N, and 15.1 N for the metallic color of Brand-1, pink color of Brand -2, and metallic color of Brand -3, respectively. There were significant (ptensile force of each brand, except clear and metallic color of Brand-1 & 3 and pink color of Brand-2 & 3. Similarly, among the pigmented ligatures from each brand, significant (ptensile force, except metallic color of Brand-1 & 3. Brand-3 had the highest residual force after 28 days, whereas the loss of force was 80-90% in Brand-1 & 2 and 20-30% in Brand-3. There were also significant (ptensile and residual forces among the three pigmented elastomeric ligatures of the three commercial brands.

Evaluation of residue-residue contact predictions in CASP9

KAUST Repository

Monastyrskyy, Bohdan

2011-01-01

This work presents the results of the assessment of the intramolecular residue-residue contact predictions submitted to CASP9. The methodology for the assessment does not differ from that used in previous CASPs, with two basic evaluation measures being the precision in recognizing contacts and the difference between the distribution of distances in the subset of predicted contact pairs versus all pairs of residues in the structure. The emphasis is placed on the prediction of long-range contacts (i.e., contacts between residues separated by at least 24 residues along sequence) in target proteins that cannot be easily modeled by homology. Although there is considerable activity in the field, the current analysis reports no discernable progress since CASP8.

GPI anchor biosynthesis in yeast : phosphoethanolamine is attached to the alpha1,4-linked mannose of the complete precursor glycophospholipid

NARCIS (Netherlands)

Canivenc-Gansel, E; Imhof, I; Reggiori, F; Burda, P; Conzelmann, A; Benachour, A; Reggiori, Fulvio

Cells synthesize the GPI anchor carbohydrate core by successively adding N-acetylglucosamine, three mannoses, and phosphoethanolamine (EtN-P) onto phosphatidylinositol, thus forming the complete GPI precursor lipid which is then added to proteins. Previously, we isolated a GPI deficient yeast mutant

15N Isotopic Study on Decomposition of Organic Residues Incorporated into Alluvial and Sandy Saline Soils

International Nuclear Information System (INIS)

El-Kholi, A. F.; Galal, Y. G. M.

2004-01-01

Incubation experiment was conducted to study the effect of the nitrogenous fertilizer on the decomposition and mineralization of organic residues (soybean powdered forage) as well as the release of the soil inorganic nitrogen. This technique was carried out using two types of soils, one is alluvial and the other is saline sandy soil collected from Fayoum governorate. Soybean forage has an organic carbon 23.1%, total N 1.6% and C/N ratio 14.4. Regarding the effect of incubation period on the two soil samples, the evolved NH 4 -N was generally reached its highest peak after 30-45 days, in the presence of either the added 15 No3-fertilizer solely or in combination with soybean forage. Reversible trend was occurred with regard to the evolved No3-N. The highest peak of evolved No3-N recorded in unfertilized control, as compared to 15 No3-N treatment, at 30 day incubation period indicated that the addition of labeled mineral fertilizer had appreciably enhanced the immobilization process. Net nitrification revealed that it was the highest in unfertilized control soil where it was significantly decreased in the treated two soil samples. Gross mineralization as affected by the addition of soybean forage in combination with labeled mineral fertilizer had been promoted by 75% in the alluvial soil and by 18% in the sandy saline soil, as compared with the soil samples received 15 No3-fertilizer only. Gross immobilization, in soil samples received 15 No3-fertilizer plus soybean forage had surpassed those received 15 No3-fertilizer only by 16% in the alluvial soil and by 25% in the sandy saline soil. (Authors)

Quantitative conformational analysis of the core region of N-glycans using residual dipolar couplings, aqueous molecular dynamics, and steric alignment

International Nuclear Information System (INIS)

Almond, Andrew; Duus, Jens O.

2001-01-01

A method is described for quantitatively investigating the dynamic conformation of small oligosaccharides containing an α(1 → 6) linkage. It was applied to the oligosaccharide Man-α(1 → 3) {Man-α (1 → 6)}Man-α-O-Me, which is a core region frequently observed in N-linked glycans. The approach tests an aqueous molecular dynamics simulation, capable of predicting microscopic dynamics, against experimental residual dipolar couplings, by assuming that alignment is caused purely by steric hindrance. The experimental constraints were heteronuclear and homonuclear residual dipolar couplings, and in particular those within the α(1 → 6) linkage itself. Powerful spin-state-selective pulse sequences and editing schemes were used to obtain the most relevant couplings for testing the model. Molecular dynamics simulations in water over a period of 50 ns were not able to predict the correct rotamer population at the α(1 → 6) linkage to agree with the experimental data. However, this sampling problem could be corrected using a simple maximum likelihood optimisation, indicating that the simulation was modelling local dynamics correctly. The maximum likelihood prediction of the residual dipolar couplings was found to be an almost equal population of the gg and gt rotamer conformations at the α(1 → 6) linkage, and the tg conformation was predicted to be unstable and unpopulated in aqueous solution. In this case all twelve measured residual dipolar couplings could be satisfied. This conformer population could also be used to make predictions of scalar couplings with the use of a previously derived empirical equation, and is qualitatively in agreement with previous predictions based on NMR, X-ray crystallography and optical data

Measurement of conformational constraints in an elastin-mimetic protein by residue-pair selected solid-state NMR

Energy Technology Data Exchange (ETDEWEB)

Hong, Mei [Iowa State University, Department of Chemistry (United States)], E-mail: mhong@iastate.edu; McMillan, R. Andrew; Conticello, Vincent P. [Emory University, Department of Chemistry (United States)

2002-02-15

We introduce a solid-state NMR technique for selective detection of a residue pair in multiply labeled proteins to obtain site-specific structural constraints. The method exploits the frequency-offset dependence of cross polarization to achieve {sup 13}CO{sub i} {sup {yields}} {sup 15}N{sub i} {sup {yields}} {sup 13}C{alpha}{sub i} transfer between two residues. A {sup 13}C, {sup 15}N-labeled elastin mimetic protein (VPGVG){sub n} is used to demonstrate the method. The technique selected the Gly3 C{alpha} signal while suppressing the Gly5 C{alpha} signal, and allowed the measurement of the Gly3 C{alpha} chemical shift anisotropy to derive information on the protein conformation. This residue-pair selection technique should simplify the study of protein structure at specific residues.

Tracking C and N dynamics and stabilization in soil amended with wheat residue and its correponding bioethanol by-product: a 13C/15C study

NARCIS (Netherlands)

Cayuela, M.L.; Kuikman, P.J.; Bakker, R.R.C.; Groenigen, van J.W.

2014-01-01

Removing agricultural cellulosic residues from fields for the production of ‘second generation biofuels'has the potential to profoundly alter C and N cycling in soil, increasing the risk of soil organic matter depletion and favoring soil–atmosphere gaseous exchanges. However, these negative impacts

Uso del residual sólido de biogás para la producción de hortalizas en huertos intensivos./Use of biogas solid waste for intensive vegetable production gardens

Directory of Open Access Journals (Sweden)

Pável Chaveli Chávez

2014-01-01

Full Text Available Resumen:Se llevó a cabo un estudio para medir el comportamiento de la utilización de diferentes dosis de residual sólido de producción de biogás (0.5; 1.0; 1.5 y 2.0 kg.m-2 en tres momentos de aplicación (al inicio, cada dos cultivos y en cada cultivo en una secuencia de hortalizas. Se empleó un diseño de bloques al azar con tres repeticiones. Se realizaron muestreos al suelo al término del ciclo de cultivo y se determinó pH (KCl, contenido de fósforo, potasio y el porciento de materia orgánica. Del análisis de los resultados se obtuvo que la dosis de 1 kg.m-2 del residual de biogás en su estado sólido aplicado cada dos cultivos logro incrementos de los rendimientos por encima del 30% con respecto a la no aplicación del residual. Los contenidos de P2O5 y K2O y el % de materia orgánica se favorecieron con el uso del abono al término del ciclo de las hortalizas, lo que permite la explotación intensiva del suelo./Abstract: A study was conducted to measure the performance of using different doses of solid waste in biogas production (0.5, 1.0, 1.5 and 2.0 kg.m-2 in three application times (at baseline, each two crops and in each crop in a sequence of vegetables. Design of randomized blocks with three replications was employed. Soil sampling at the end of the crop cycle were performed and pH (KCl, content of phosphorus, potassium and the percentage of organic matter was determined. Analysis of the results obtained that the dose of 1 kg.m-2 residual biogas in its solid state achievement applied every two crops yield increases above 30% over the non-implementation of the residual. The P2O5 and K2O and % organic matter contents were favored by the use of the organic fertilizer at the end of the cycle of the vegetables, allowing the intensive soil use.

Effects of tillage methods, corn residue mulch and n fertilizer levels on the wheat crop productivity under the rain fed condition of loess plateau china

International Nuclear Information System (INIS)

Tanveer, S.K.; Zhang, J.L.; Lu, X.L.; Wen, X.; Tanveer, S.K.

2015-01-01

A 2 years study was conducted to assess the effects of different tillage methods (Chisel plough tillage, Zero-tillage, Rotary tillage and Mould board plough tillage), two mulch levels (M0 i.e. No corn residue mulch and M1 i.e. Corn residue mulch) and 5 N fertilizer levels (0, 80, 160, 240 and 320 kg N/ha) on the wheat crop productivity under the rain fed condition of Loess Plateau, China. Factorial experiment with three replications, having strip, split-split arrangement, with tillage methods in the main plots, mulch levels in sub- plots and N-fertilizer levels in the sub-sub plots was used for this study. Due to variations in rainfalls, during the year, 2010-11, maximum grain yields i.e. 6.58 t/ha and 6.72 t/ha were recorded in case of Zero tillage planting method and similarly in case of 80 kg N/ha, while during the cropping year 2011-12 equal grain yields were recorded in case of all tillage methods, however maximum grain yield (7.46 t /ha) was recorded in case of 320 kg N/ha, N fertilizer level. On two years average basis, maximum grain yields i.e. 6.75 t/ha and 6.80 t/ha were recorded in case of Zero tillage planting method and similarly in case of 80 kg N/ha as compared with the other tillage methods or N fertilizer levels. Use of mulch reduced > 40% weeds infestation. Economic analysis shows that Zero tillage and minimum use of N fertilizer according to the projected rainfalls along with the use of mulch are both economic and environmental friendly. (author)

Investigation of the Effect of Residual Stress Gradient on the Wear Behavior of PVD Thin Films

Science.gov (United States)

Tlili, B.; Nouveau, C.; Guillemot, G.; Besnard, A.; Barkaoui, A.

2018-02-01

The control of residual stresses has been seldom investigated in multilayer coatings dedicated to improvement of wear behavior. Here, we report the preparation and characterization of superposed structures composed of Cr, CrN and CrAlN layers. Nano-multilayers CrN/CrAlN and Cr/CrN/CrAlN were deposited by Physical Vapor Deposition (PVD) onto Si (100) and AISI4140 steel substrates. The Cr, CrN and CrAlN monolayers were developed with an innovative approach in PVD coatings technologies corresponding to deposition with different residual stresses levels. Composition and wear tracks morphologies of the coatings were characterized by scanning electron microscopy, high-resolution transmission electron microscopy, atomic force microscopy, x-ray photoelectron spectroscopy, energy-dispersive x-ray spectroscopy, x-ray diffraction and 3D-surface analyzer. The mechanical properties (hardness, residual stresses and wear) were investigated by nanoindentation, interferometry and micro-tribometry (fretting-wear tests). Observations suggest that multilayer coatings are composed mostly of nanocrystalline. The residual stresses level in the films has practically affected all the physicochemical and mechanical properties as well as the wear behavior. Consequently, it is demonstrated that the coating containing moderate stresses has a better wear behavior compared to the coating developed with higher residual stresses. The friction contact between coated samples and alumina balls shows also a large variety of wear mechanisms. In particular, the abrasive wear of the coatings was a combination of plastic deformation, fine microcracking and microspallation. The application of these multilayers will be wood machining of green wood.

Bioconversion of Ginsenosides in the American Ginseng (西洋參 Xī Yáng Shēn Extraction Residue by Fermentation with Lingzhi (靈芝 Líng Zhī, Ganoderma Lucidum

Directory of Open Access Journals (Sweden)

Bo Yang Hsu

2013-04-01

Full Text Available Ginseng (人参 Rén Shēn has been widely employed in functional foods and traditional medicines in many Asian countries. Owing to the high consumer demand of ginseng products, a large amount of ginseng residue is generated after extraction of ginseng. However, the ginseng residue still contains many bioactive compounds such as ginsenosides. The objective of this research was to convert ginsenosides in American ginseng (西洋參 Xī Yáng Shēn extraction residue (AmR by fermentation with lingzhi (靈芝 Líng Zhī, Ganoderma lucidum and the fermentation products will be used for further hypoglycemic activity research. Thus, this study was primarily focused on the ginsenosides that have been reported to possess hypoglycemic activity. In this study, the changes in seven ginsenoside [Rg1, Re, Rb1, Rc, Rg3(S, compound K (CK, and Rh2(S] in the products as affected by fermentation were investigated. Our results showed that the levels of ginsenosides, namely, Rg1, Rg3(S, and CK increased, while the other ginsenosides (Re, Rb1, and Rc decreased during the fermentation process.

N balance of different N application rate of winter wheat under water-saving condition

International Nuclear Information System (INIS)

Li Shijuan; Zhu Yeping; Sun Kaimeng; E Yue

2003-01-01

N uptake and N balance of different N rate applied to wheat under water-saving condition were investigated with 15 N tracer technique and the dynamic N uptake of economic N treatment under two irrigation conditions was compared. The results showed that (1) compared with conventional n treatment, the N loss of economic N treatment reduced while NUE and N residue in soil improved under water-saving condition; (2) Use efficiency of fertilizer applied as basal fertilizer was higher than that as top-dressing fertilizer under water-saving condition; (3) The fertilizer N residue rate was from 29% to 41%, and 60% of N residue, which distributed in 1 m depth soil concentrated in 0-20 cm surface layer; (4) In whole growing stage of wheat, fertilizer N hadn't leach to 130 cm depth; (5) NUE of economic N treatment under conventional irrigation decreased by 16.6% compared with the same n treatment under water-saving condition

Prediction of vitamin interacting residues in a vitamin binding protein using evolutionary information

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Panwar Bharat

2013-02-01

Full Text Available Abstract Background The vitamins are important cofactors in various enzymatic-reactions. In past, many inhibitors have been designed against vitamin binding pockets in order to inhibit vitamin-protein interactions. Thus, it is important to identify vitamin interacting residues in a protein. It is possible to detect vitamin-binding pockets on a protein, if its tertiary structure is known. Unfortunately tertiary structures of limited proteins are available. Therefore, it is important to develop in-silico models for predicting vitamin interacting residues in protein from its primary structure. Results In this study, first we compared protein-interacting residues of vitamins with other ligands using Two Sample Logo (TSL. It was observed that ATP, GTP, NAD, FAD and mannose preferred {G,R,K,S,H}, {G,K,T,S,D,N}, {T,G,Y}, {G,Y,W} and {Y,D,W,N,E} residues respectively, whereas vitamins preferred {Y,F,S,W,T,G,H} residues for the interaction with proteins. Furthermore, compositional information of preferred and non-preferred residues along with patterns-specificity was also observed within different vitamin-classes. Vitamins A, B and B6 preferred {F,I,W,Y,L,V}, {S,Y,G,T,H,W,N,E} and {S,T,G,H,Y,N} interacting residues respectively. It suggested that protein-binding patterns of vitamins are different from other ligands, and motivated us to develop separate predictor for vitamins and their sub-classes. The four different prediction modules, (i vitamin interacting residues (VIRs, (ii vitamin-A interacting residues (VAIRs, (iii vitamin-B interacting residues (VBIRs and (iv pyridoxal-5-phosphate (vitamin B6 interacting residues (PLPIRs have been developed. We applied various classifiers of SVM, BayesNet, NaiveBayes, ComplementNaiveBayes, NaiveBayesMultinomial, RandomForest and IBk etc., as machine learning techniques, using binary and Position-Specific Scoring Matrix (PSSM features of protein sequences. Finally, we selected best performing SVM modules and

Prediction of vitamin interacting residues in a vitamin binding protein using evolutionary information.

Science.gov (United States)

Panwar, Bharat; Gupta, Sudheer; Raghava, Gajendra P S

2013-02-07

The vitamins are important cofactors in various enzymatic-reactions. In past, many inhibitors have been designed against vitamin binding pockets in order to inhibit vitamin-protein interactions. Thus, it is important to identify vitamin interacting residues in a protein. It is possible to detect vitamin-binding pockets on a protein, if its tertiary structure is known. Unfortunately tertiary structures of limited proteins are available. Therefore, it is important to develop in-silico models for predicting vitamin interacting residues in protein from its primary structure. In this study, first we compared protein-interacting residues of vitamins with other ligands using Two Sample Logo (TSL). It was observed that ATP, GTP, NAD, FAD and mannose preferred {G,R,K,S,H}, {G,K,T,S,D,N}, {T,G,Y}, {G,Y,W} and {Y,D,W,N,E} residues respectively, whereas vitamins preferred {Y,F,S,W,T,G,H} residues for the interaction with proteins. Furthermore, compositional information of preferred and non-preferred residues along with patterns-specificity was also observed within different vitamin-classes. Vitamins A, B and B6 preferred {F,I,W,Y,L,V}, {S,Y,G,T,H,W,N,E} and {S,T,G,H,Y,N} interacting residues respectively. It suggested that protein-binding patterns of vitamins are different from other ligands, and motivated us to develop separate predictor for vitamins and their sub-classes. The four different prediction modules, (i) vitamin interacting residues (VIRs), (ii) vitamin-A interacting residues (VAIRs), (iii) vitamin-B interacting residues (VBIRs) and (iv) pyridoxal-5-phosphate (vitamin B6) interacting residues (PLPIRs) have been developed. We applied various classifiers of SVM, BayesNet, NaiveBayes, ComplementNaiveBayes, NaiveBayesMultinomial, RandomForest and IBk etc., as machine learning techniques, using binary and Position-Specific Scoring Matrix (PSSM) features of protein sequences. Finally, we selected best performing SVM modules and obtained highest MCC of 0.53, 0.48, 0.61, 0

Persistence and bioaccumulation of oxyfluorfen residues in onion.

Science.gov (United States)

Sondhia, Shobha

2010-03-01

A field study was conducted to determine persistence and bioaccumulation of oxyflorfen residues in onion crop at two growth stages. Oxyfluorfen (23.5% EC) was sprayed at 250 and 500 g ai/ha on the crop (variety, N53). Mature onion and soil samples were collected at harvest. Green onion were collected at 55 days from each treated and control plot and analyzed for oxyfluorfen residues by a validated high-performance liquid chromatography method with an accepted recovery of 78-92% at the minimum detectable concentration of 0.003 microg g(-1). Analysis showed 0.015 and 0.005 microg g(-1) residues of oxyfluorfen at 250 g a.i. ha(-1) rate in green and mature onion samples, respectively; however, at 500 g a.i.ha(-1) rates, 0.025 and 0.011 microg g(-1) of oxyfluorfen residues were detected in green and mature onion samples, respectively. Soil samples collected at harvest showed 0.003 and 0.003 microg g(-1) of oxyfluorfen residues at the doses 250 and 500 g a.i. ha(-1), respectively. From the study, a pre-harvest interval of 118 days for onion crop after the herbicide application is suggested.

Effects of plant polyphenols and a-tocopherol on lipid oxidation, residual nitrites, biogenic amines, and N-nitrosamines formation during ripening and storage of dry-cured bacon

Science.gov (United States)

Effects of plant polyphenols (green tea polyphenols (GTP) and grape seed extract (GSE) and a-tocopherol on physicochemical parameters, lipid oxidation, residual nitrite, microbiological counts, biogenic amines, and N-nitrosamines were determined in bacons during dry-curing and storage. Results show ...

Validación de un método de determinación del polisacárido B residual en vesículas de membrana externa de Neisseria meningitidis

Directory of Open Access Journals (Sweden)

Jannete Rico

2010-08-01

Full Text Available La Cromatografía Líquida de Alta Resolución-Fluorescencia ha resultado ser una herramienta sensible para la detección de trazas en productos farmacéuticos y es utilizada frecuentemente para la cuantificación de algunos polisacáridos de origen bacteriano que poseen ácido siálico como unidad repetitiva. En este trabajo nos planteamos como objetivo establecer y validar el método de HPLC_Fluorescencia, para determinar el contenido de polisacárido B residual en vesículas de membrana externa de Neisseria meningitidis. Para ello se realizó el montaje del método HPLC-FL, utilizando una columna de fase reversa C18 (Ultrasphere ODS, Beckman, USA y se evaluaron seis lotes de vesículas de membrana externa de diferentes cepas Cu 385/83 y NZ 228. Se demostró que este método permitió la cuantificación de polisacárido B de una forma específica y exacta, y que cumplía con todos los parámetros de validación establecidos para un método de determinación de trazas mediante HPLC.

O-Linked β-N-acetylglucosamine (O-GlcNAc) modification: a new pathway to decode pathogenesis of diabetic retinopathy.

Science.gov (United States)

Gurel, Zafer; Sheibani, Nader

2018-01-31

The incidence of diabetes continues to rise among all ages and ethnic groups worldwide. Diabetic retinopathy (DR) is a complication of diabetes that affects the retinal neurovasculature causing serious vision problems, including blindness. Its pathogenesis and severity is directly linked to the chronic exposure to high glucose conditions. No treatments are currently available to stop the development and progression of DR. To develop new and effective therapeutic approaches, it is critical to better understand how hyperglycemia contributes to the pathogenesis of DR at the cellular and molecular levels. We propose alterations in O-GlcNAc modification of target proteins during diabetes contribute to the development and progression of DR. The O-GlcNAc modification is regulated through hexosamine biosynthetic pathway. We showed this pathway is differentially activated in various retinal vascular cells under high glucose conditions perhaps due to their selective metabolic activity. O-GlcNAc modification can alter protein stability, activity, interactions, and localization. By targeting the same amino acid residues (serine and threonine) as phosphorylation, O-GlcNAc modification can either compete or cooperate with phosphorylation. Here we will summarize the effects of hyperglycemia-induced O-GlcNAc modification on the retinal neurovasculature in a cell-specific manner, providing new insight into the role of O-GlcNAc modification in early loss of retinal pericytes and the pathogenesis of DR. © 2018 The Author(s). Published by Portland Press Limited on behalf of the Biochemical Society.

Evaluation of the interfacial shear strength and residual stress of TiAlN coating on ZIRLO™ fuel cladding using a modified shear-lag model approach

Energy Technology Data Exchange (ETDEWEB)

Liu, Y., E-mail: troy.liu@manchester.ac.uk [Materials Performance Centre, School of Materials, The University of Manchester, M13 9PL (United Kingdom); Bhamji, I., E-mail: imran.bhamji@manchester.ac.uk [Materials Performance Centre, School of Materials, The University of Manchester, M13 9PL (United Kingdom); Withers, P.J., E-mail: p.j.withers@manchester.ac.uk [Materials Performance Centre, School of Materials, The University of Manchester, M13 9PL (United Kingdom); Wolfe, D.E., E-mail: dew125@arl.psu.edu [The Pennsylvania State University, University Park, State College, PA 16801 (United States); Motta, A.T., E-mail: atmnuc@engr.psu.edu [The Pennsylvania State University, University Park, State College, PA 16801 (United States); Preuss, M., E-mail: michael.preuss@manchester.ac.uk [Materials Performance Centre, School of Materials, The University of Manchester, M13 9PL (United Kingdom)

2015-11-15

This paper investigates the residual stresses and interfacial shear strength of a TiAlN coating on Zr–Nb–Sn–Fe alloy (ZIRLO™) substrate designed to improve corrosion resistance of fuel cladding used in water-cooled nuclear reactors, both during normal and exceptional conditions, e.g. a loss of coolant event (LOCA). The distribution and maximum value of the interfacial shear strength has been estimated using a modified shear-lag model. The parameters critical to this analysis were determined experimentally. From these input parameters the interfacial shear strength between the TiAlN coating and ZIRLO™ substrate was inferred to be around 120 MPa. It is worth noting that the apparent strength of the coating is high (∼3.4 GPa). However, this is predominantly due to the large compressive residuals stress (3 GPa in compression), which must be overcome for the coating to fail in tension, which happens at a load just 150 MPa in excess of this.

Ammonia volatilization from crop residues and frozen green manure crops

NARCIS (Netherlands)

Ruijter, de F.J.; Huijsmans, J.F.M.; Rutgers, B.

2010-01-01

Agricultural systems can lose substantial amounts of nitrogen (N). To protect the environment, the European Union (EU) has adopted several directives that set goals to limit N losses. National Emission Ceilings (NEC) are prescribed in the NEC directive for nitrogen oxides and ammonia. Crop residues

The absence of N-acetylglucosamine in wall teichoic acids of Listeria monocytogenes modifies biofilm architecture and tolerance to rinsing and cleaning procedures.

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Thomas Brauge

Full Text Available The wall teichoic acid (WTA is the major carbohydrate found within the extracellular matrix of the Listeria monocytogenes biofilm. We first addressed the frequency of spontaneous mutations in two genes (lmo2549 and lmo2550 responsible for the GlcNAcylation in 93 serotype 1/2a strains that were mainly isolated from seafood industries. We studied the impact of mutations in lmo2549 or lmo2550 genes on biofilm formation by using one mutant carrying a natural mutation inactivating the lmo2550 gene (DSS 1130 BFA2 strain and two EGD-e mutants that lack respective genes by in-frame deletion of lmo2549 or lmo2550 using splicing-by-overlap-extension PCR, followed by allelic exchange mutagenesis. The lmo2550 gene mutation, occurring in around 50% isolates, caused a decrease in bacterial adhesion to stainless steel compared to wild-type EGD-e strain during the adhesion step. On the other hand, bacterial population weren't significantly different after 24h-biofilm formation. The biofilm architecture was different between the wild-type strain and the two mutants inactivated for lmo2549 or lmo2550 genes respectively with the presence of bacterial micro-colonies for mutants which were not observed in the wild-type EGD-e strain biofilm. These differences might account for the stronger hydrophilic surface exhibited by the mutant cells. Upon a water flow or to a cleaning procedure at a shear stress of 0.16 Pa, the mutant biofilms showed the higher detachment rate compared to wild-type strain. Meanwhile, an increase in the amount of residual viable but non-culturable population on stainless steel was recorded in two mutants. Our data suggests that the GlcNAc residue of WTA played a role in adhesion and biofilm formation of Listeria monocyctogenes.

The absence of N-acetylglucosamine in wall teichoic acids of Listeria monocytogenes modifies biofilm architecture and tolerance to rinsing and cleaning procedures.

Science.gov (United States)

Brauge, Thomas; Faille, Christine; Sadovskaya, Irina; Charbit, Alain; Benezech, Thierry; Shen, Yang; Loessner, Martin J; Bautista, Jean Romain; Midelet-Bourdin, Graziella

2018-01-01

The wall teichoic acid (WTA) is the major carbohydrate found within the extracellular matrix of the Listeria monocytogenes biofilm. We first addressed the frequency of spontaneous mutations in two genes (lmo2549 and lmo2550) responsible for the GlcNAcylation in 93 serotype 1/2a strains that were mainly isolated from seafood industries. We studied the impact of mutations in lmo2549 or lmo2550 genes on biofilm formation by using one mutant carrying a natural mutation inactivating the lmo2550 gene (DSS 1130 BFA2 strain) and two EGD-e mutants that lack respective genes by in-frame deletion of lmo2549 or lmo2550 using splicing-by-overlap-extension PCR, followed by allelic exchange mutagenesis. The lmo2550 gene mutation, occurring in around 50% isolates, caused a decrease in bacterial adhesion to stainless steel compared to wild-type EGD-e strain during the adhesion step. On the other hand, bacterial population weren't significantly different after 24h-biofilm formation. The biofilm architecture was different between the wild-type strain and the two mutants inactivated for lmo2549 or lmo2550 genes respectively with the presence of bacterial micro-colonies for mutants which were not observed in the wild-type EGD-e strain biofilm. These differences might account for the stronger hydrophilic surface exhibited by the mutant cells. Upon a water flow or to a cleaning procedure at a shear stress of 0.16 Pa, the mutant biofilms showed the higher detachment rate compared to wild-type strain. Meanwhile, an increase in the amount of residual viable but non-culturable population on stainless steel was recorded in two mutants. Our data suggests that the GlcNAc residue of WTA played a role in adhesion and biofilm formation of Listeria monocyctogenes.

Effect of soil-bound residues of malathion on microbial activities

International Nuclear Information System (INIS)

Hussain, A.; Iqbal, Z.; Asi, M.R.; Tahira, R.; Chudhary, J.A.

2001-01-01

The effect of soil-bound residues of malathion on CO/sub 2/ evolution, dehydrogenase activity and some nitrogen transformations in a loam soil was investigated under laboratory conditions. The soil samples containing bound residues arising from 10 mg g-1 of the applied malathion were mixed in equal quantity with fresh soil and compared with solvent extracted control soil without bound residues (extracted in the same way as soil containing bound residues). Another control comprising un extracted fresh soil without bound residues was also kept to study the effect of solvent extraction on the biological activity. Rate of Carbon mineralization (CO/sub 2/ evolution) was decreased in the presence of soil-bound residues of malathion. Bound residues also affected dehydrogenase activity of soil. Over 40% inhibition of dehydrogenase activity was observed after 4 days and the inhibition persisted at least for 12 days. Nitrogen mineralization was stimulated in soil containing bound residues of malathion and this stimulatory effect increased with time of incubation. Nitrification was partially inhibited in the presence of soil-bound residues of malathion. The inhibitory effect of the soil-bound residues on nitrification did not show much variation with time. The soil-bound residues did not affect denitrification rate (N/sub 2/O evolution). Nitrogen fixation (acetylene reduction) was partially inhibited in soil amended with bound residues of malathion and the inhibitory effect persisted for at least one week. In general, soil bound residues of malathion inhibited CO/sub 2/ evolution, dehydrogenase activity, nitrification and nitrogen fixation while mineralization of nitrogen was stimulated. Denitrification was not affected by the applied insecticide. (author)

Quantification of residual solvents in antibody drug conjugates using gas chromatography

Energy Technology Data Exchange (ETDEWEB)

Medley, Colin D., E-mail: medley.colin@gene.com [Genentech Inc., Small Molecule Pharmaceutical Sciences, 1 DNA Way, South San Francisco, CA 94080 (United States); Kay, Jacob [Research Pharmaceutical Services, 520 Virginia Dr. Fort, Washington, PA (United States); Li, Yi; Gruenhagen, Jason; Yehl, Peter; Chetwyn, Nik P. [Genentech Inc., Small Molecule Pharmaceutical Sciences, 1 DNA Way, South San Francisco, CA 94080 (United States)

2014-11-19

Highlights: • Sensitive residual solvents detection in ADCs. • 125 ppm QL for common conjugation solvents. • Generic and validatable method. - Abstract: The detection and quantification of residual solvents present in clinical and commercial pharmaceutical products is necessary from both patient safety and regulatory perspectives. Head-space gas chromatography is routinely used for quantitation of residual solvents for small molecule APIs produced through synthetic processes; however residual solvent analysis is generally not needed for protein based pharmaceuticals produced through cultured cell lines where solvents are not introduced. In contrast, antibody drug conjugates and other protein conjugates where a drug or other molecule is covalently bound to a protein typically use solvents such as N,N-dimethylacetamide (DMA), N,N‑dimethylformamide (DMF), dimethyl sulfoxide (DMSO), or propylene glycol (PG) to dissolve the hydrophobic small molecule drug for conjugation to the protein. The levels of the solvent remaining following the conjugation step are therefore important to patient safety as these parental drug products are introduced directly into the patients bloodstream. We have developed a rapid sample preparation followed by a gas chromatography separation for the detection and quantification of several solvents typically used in these conjugation reactions. This generic method has been validated and can be easily implemented for use in quality control testing for clinical or commercial bioconjugated products.

Peptides containing internal residues of pyroglutamic acid: proton NMR characteristics

International Nuclear Information System (INIS)

Khan, S.A.

1986-01-01

The proton NMR characteristics of internal pyroglutamic acid (Glp; 5-oxoproline) residues in seven tripeptides of the general structure Boc-Xxx-Glp-Yyy-NH 2 were studied. In general, the chemical shifts of several diagnostic protons moved downfield on going from the Glu-containing peptides (Boc-Xxx-Glu-Yyy-NH 2 ) to the corresponding Glp-containing peptides. The C-2 proton of the Xxx residue was shifted by about 1.1 ppm. The N-2 proton of the Yyy residue was shifted by about 0.5 ppm. The C-2 proton of the Glx residue itself was shifted by about 0.5 ppm. One of the Glx C-3 protons was also shifted by about 0.5 ppm, but the other remained essentially unchanged. Finally, the Glx C-4 protons were shifted by about 0.3 ppm. Internal Glu residues are readily converted chemically into internal Glp residues. This conversion also occurs as a side reaction during HP cleavage of the protecting group from Glu(OBzl) residues. The spontaneous fragmentation of serum proteins C3, C4 and λ 2 -macroglobulin under denaturing conditions is probably due to regioselective hydrolysis of an internal Glp residue formed in each of these proteins upon denaturation. These proton NMR characteristics may be useful in establishing the presence of internal Glp residues in synthetic and natural peptides

The Fusarium oxysporum gnt2, encoding a putative N-acetylglucosamine transferase, is involved in cell wall architecture and virulence.

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Loida López-Fernández

Full Text Available With the aim to decipher the molecular dialogue and cross talk between Fusarium oxysporum f.sp. lycopersci and its host during infection and to understand the molecular bases that govern fungal pathogenicity, we analysed genes presumably encoding N-acetylglucosaminyl transferases, involved in glycosylation of glycoproteins, glycolipids, proteoglycans or small molecule acceptors in other microorganisms. In silico analysis revealed the existence of seven putative N-glycosyl transferase encoding genes (named gnt in F. oxysporum f.sp. lycopersici genome. gnt2 deletion mutants showed a dramatic reduction in virulence on both plant and animal hosts. Δgnt2 mutants had αalterations in cell wall properties related to terminal αor β-linked N-acetyl glucosamine. Mutant conidia and germlings also showed differences in structure and physicochemical surface properties. Conidial and hyphal aggregation differed between the mutant and wild type strains, in a pH independent manner. Transmission electron micrographs of germlings showed strong cell-to-cell adherence and the presence of an extracellular chemical matrix. Δgnt2 cell walls presented a significant reduction in N-linked oligosaccharides, suggesting the involvement of Gnt2 in N-glycosylation of cell wall proteins. Gnt2 was localized in Golgi-like sub-cellular compartments as determined by fluorescence microscopy of GFP::Gnt2 fusion protein after treatment with the antibiotic brefeldin A or by staining with fluorescent sphingolipid BODIPY-TR ceramide. Furthermore, density gradient ultracentrifugation allowed co-localization of GFP::Gnt2 fusion protein and Vps10p in subcellular fractions enriched in Golgi specific enzymatic activities. Our results suggest that N-acetylglucosaminyl transferases are key components for cell wall structure and influence interactions of F. oxysporum with both plant and animal hosts during pathogenicity.

The Fusarium oxysporum gnt2, Encoding a Putative N-Acetylglucosamine Transferase, Is Involved in Cell Wall Architecture and Virulence

Science.gov (United States)

López-Fernández, Loida; Ruiz-Roldán, Carmen; Pareja-Jaime, Yolanda; Prieto, Alicia; Khraiwesh, Husam; Roncero, M. Isabel G.

2013-01-01

With the aim to decipher the molecular dialogue and cross talk between Fusarium oxysporum f.sp. lycopersci and its host during infection and to understand the molecular bases that govern fungal pathogenicity, we analysed genes presumably encoding N-acetylglucosaminyl transferases, involved in glycosylation of glycoproteins, glycolipids, proteoglycans or small molecule acceptors in other microorganisms. In silico analysis revealed the existence of seven putative N-glycosyl transferase encoding genes (named gnt) in F. oxysporum f.sp. lycopersici genome. gnt2 deletion mutants showed a dramatic reduction in virulence on both plant and animal hosts. Δgnt2 mutants had αalterations in cell wall properties related to terminal αor β-linked N-acetyl glucosamine. Mutant conidia and germlings also showed differences in structure and physicochemical surface properties. Conidial and hyphal aggregation differed between the mutant and wild type strains, in a pH independent manner. Transmission electron micrographs of germlings showed strong cell-to-cell adherence and the presence of an extracellular chemical matrix. Δgnt2 cell walls presented a significant reduction in N-linked oligosaccharides, suggesting the involvement of Gnt2 in N-glycosylation of cell wall proteins. Gnt2 was localized in Golgi-like sub-cellular compartments as determined by fluorescence microscopy of GFP::Gnt2 fusion protein after treatment with the antibiotic brefeldin A or by staining with fluorescent sphingolipid BODIPY-TR ceramide. Furthermore, density gradient ultracentrifugation allowed co-localization of GFP::Gnt2 fusion protein and Vps10p in subcellular fractions enriched in Golgi specific enzymatic activities. Our results suggest that N-acetylglucosaminyl transferases are key components for cell wall structure and influence interactions of F. oxysporum with both plant and animal hosts during pathogenicity. PMID:24416097

Desarrollo de un método de CLAR-IR para la determinación de etanol residual en vacuna Development of a HPLC-IR method for determination of residual ethanol in vaccine

Directory of Open Access Journals (Sweden)

Matilde Cuevas Valdespino

2009-08-01

Full Text Available Los ingredientes farmacéuticos activos de la vacuna antimeningocócica cubana VA-MENGOC-BC TM (vesículas de membrana externa purificadas de Neisseria meningitidis, serogrupo B y polisacárido capsular purificado de Neisseria meningitidis, serogrupo C son conservados en etanol, de ahí que dicha vacuna posea un contenido de etanol residual, cuya concentración real no se conocía hasta el momento. Las regulaciones internacionales plantean que los productos biofarmacéuticos y sus ingredientes farmacéuticos activos deben tener bien caracterizadas todas sus impurezas, por lo que el objetivo de este trabajo fue el desarrollo de un método de determinación de etanol mediante cromatografía líquida de alta resolución-índice de refracción para estos fines y su comparación con un método utilizado frecuentemente para cuantificar este solvente, como es la cromatografía gaseosa. El método evaluado resultó ser útil y con una buena robustez para la determinación de este solvente orgánico en esta vacuna antimenigocócica. No se detectaron diferencias estadísticamente significativas entre los resultados obtenidos al evaluar las mismas muestras de vacuna mediante ambos métodos cromatográficos (cromatografía líquida de alta resolución y cromatografía gaseosa, lo que indica la posibilidad del uso de la cromatografía líquida de alta resolución en sustitución de la cromatografía gaseosa para esta determinación.Active pharmaceutical ingredients of Cuban anti-meningococcal vaccine VA-MENGOC-BC TM (vesicles of purified external membranes of Neisseria meningitidis, B serum-group, and purified capsular polysaccharide of Neisseria meningitidis, serum-group C are stored in ethanol, thus that such vaccine has residual ethanol content, of which real concentration is not known just now. International regulations propose that the biopharmaceutical products and its active pharmaceutical ingredients must to have well defined all impurities, thus

Nitrous oxide emissions from yellow brown soil as affected by incorporation of crop residues with different carbon-to-nitrogen ratios: a case study in central China.

Science.gov (United States)

Lin, Shan; Iqbal, Javed; Hu, Ronggui; Shaaban, Muhammad; Cai, Jianbo; Chen, Xi

2013-08-01

To investigate the influence of crop residues decomposition on nitrous oxide (N2O) emission, a field study was performed with application of crop residues with different C:N ratios in a bare yellow brown soil at the experimental station of Zhangjiachong at Zigui, China. We set up six experimental treatments: no crop residue (CK), rapeseed cake (RC), potato stalk (PS), rice straw (RS), wheat straw (WS), and corn straw (CS). The carbon (C) to nitrogen (N) ratios of these crop residues were 7.5, 32.9, 40.4, 65.7, and 90.9, respectively. Nitrous oxide fluxes were measured using a static closed chamber method. N2O emissions were significantly enhanced by incorporation of crop residues. Cumulative N2O emissions negatively correlated with C:N ratio (R (2) = 0.9821) of the crop residue, but they were positively correlated with average concentrations of dissolved organic carbon and microbial biomass carbon. Nitrogen emission fraction, calculated as N2O-N emissions originated from the crop residues N, positively correlated with C:N ratio of the residues (P emissions because a significant correlation (P emissions in all treatments except the control. In contrast, a significant relationship between soil moisture and N2O emissions was found in the control only. Furthermore, N2O emission significantly correlated (P carbon and nitrogen contents can significantly alter soil N2O flux rates; and (2) soil biotic as well as abiotic variables are critical in determining soil-atmospheric N2O emissions after crop residue incorporation into soil.

Corn residue removal and CO2 emissions

Science.gov (United States)

Carbon dioxide (CO2), nitrous oxide (N2O), and methane (CH4) are the primary greenhouse gases (GHG) emitted from the soil due to agricultural activities. In the short-term, increases in CO2 emissions indicate increased soil microbial activity. Soil micro-organisms decompose crop residues and release...

Nitrous oxide production from soils amended with biogas residues and cattle slurry.

Science.gov (United States)

Abubaker, J; Odlare, M; Pell, M

2013-07-01

The amount of residues generated from biogas production has increased dramatically due to the worldwide interest in renewable energy. A common way to handle the residues is to use them as fertilizers in crop production. Application of biogas residues to agricultural soils may be accompanied with environmental risks, such as increased NO emission. In 24-d laboratory experiments, NO dynamics and total production were studied in arable soils (sandy, clay, and organic) amended with one of two types of anaerobically digested biogas residues (BR-A and BR-B) generated from urban and agricultural waste and nondigested cattle slurry (CS) applied at rates corresponding to 70 kg NH-N ha. Total NO-N losses from the sandy soil were higher after amendment with BR-B (0.32 g NO-N m) than BR-A or CS (0.02 and 0.18 g NO-N m, respectively). In the clay soil, NO-N losses were very low for CS (0.02 g NO-N m) but higher for BR-A and BR-B (0.25 and 0.15 g NO-N m, respectively). In the organic soil, CS gave higher total NO-N losses (0.31 g NO-N m) than BR-A or BR-B (0.09 and 0.08 g NO-N m, respectively). Emission peaks differed considerably between soils, occurring on Day 1 in the organic soil and on Days 11 to 15 in the sand, whereas in the clay the peak varied markedly (Days 1, 6, and 13) depending on residue type. In all treatments, NH concentration decreased with time, and NO concentration increased. Potential ammonium oxidation and potential denitrification activity increased significantly in the amended sandy soil but not in the organic soil and only in the clay amended with CS. The results showed that fertilization with BR can increase NO emissions and that the size is dependent on the total N and organic C content of the slurry and on soil type. In conclusion, the two types of BR and the CS are not interchangeable regarding their effects on NO production in different soils, and, hence, matching fertilizer type to soil type could reduce NO emissions. For instance, it could be

40 CFR 180.1130 - N-(n-octyl)-2-pyrrolidone and N-(n-dodecyl)-2-pyrrolidone; exemptions from the requirement of a...

Science.gov (United States)

2010-07-01

... 40 Protection of Environment 23 2010-07-01 2010-07-01 false N-(n-octyl)-2-pyrrolidone and N-(n... EXEMPTIONS FOR PESTICIDE CHEMICAL RESIDUES IN FOOD Exemptions From Tolerances § 180.1130 N-(n-octyl)-2-pyrrolidone and N-(n-dodecyl)-2-pyrrolidone; exemptions from the requirement of a tolerance. N-(n-octyl)-2...

Maize root lectins mediate the interaction with Herbaspirillum seropedicae via N-acetyl glucosamine residues of lipopolysaccharides.

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Eduardo Balsanelli

Full Text Available Herbaspirillum seropedicae is a plant growth-promoting diazotrophic betaproteobacterium which associates with important crops, such as maize, wheat, rice and sugar-cane. We have previously reported that intact lipopolysaccharide (LPS is required for H. seropedicae attachment and endophytic colonization of maize roots. In this study, we present evidence that the LPS biosynthesis gene waaL (codes for the O-antigen ligase is induced during rhizosphere colonization by H. seropedicae. Furthermore a waaL mutant strain lacking the O-antigen portion of the LPS is severely impaired in colonization. Since N-acetyl glucosamine inhibits H. seropedicae attachment to maize roots, lectin-like proteins from maize roots (MRLs were isolated and mass spectrometry (MS analysis showed that MRL-1 and MRL-2 correspond to maize proteins with a jacalin-like lectin domain, while MRL-3 contains a B-chain lectin domain. These proteins showed agglutination activity against wild type H. seropedicae, but failed to agglutinate the waaL mutant strain. The agglutination reaction was severely diminished in the presence of N-acetyl glucosamine. Moreover addition of the MRL proteins as competitors in H. seropedicae attachment assays decreased 80-fold the adhesion of the wild type to maize roots. The results suggest that N-acetyl glucosamine residues of the LPS O-antigen bind to maize root lectins, an essential step for efficient bacterial attachment and colonization.

Maize root lectins mediate the interaction with Herbaspirillum seropedicae via N-acetyl glucosamine residues of lipopolysaccharides.

Science.gov (United States)

Balsanelli, Eduardo; Tuleski, Thalita Regina; de Baura, Valter Antonio; Yates, Marshall Geoffrey; Chubatsu, Leda Satie; Pedrosa, Fabio de Oliveira; de Souza, Emanuel Maltempi; Monteiro, Rose Adele

2013-01-01

Herbaspirillum seropedicae is a plant growth-promoting diazotrophic betaproteobacterium which associates with important crops, such as maize, wheat, rice and sugar-cane. We have previously reported that intact lipopolysaccharide (LPS) is required for H. seropedicae attachment and endophytic colonization of maize roots. In this study, we present evidence that the LPS biosynthesis gene waaL (codes for the O-antigen ligase) is induced during rhizosphere colonization by H. seropedicae. Furthermore a waaL mutant strain lacking the O-antigen portion of the LPS is severely impaired in colonization. Since N-acetyl glucosamine inhibits H. seropedicae attachment to maize roots, lectin-like proteins from maize roots (MRLs) were isolated and mass spectrometry (MS) analysis showed that MRL-1 and MRL-2 correspond to maize proteins with a jacalin-like lectin domain, while MRL-3 contains a B-chain lectin domain. These proteins showed agglutination activity against wild type H. seropedicae, but failed to agglutinate the waaL mutant strain. The agglutination reaction was severely diminished in the presence of N-acetyl glucosamine. Moreover addition of the MRL proteins as competitors in H. seropedicae attachment assays decreased 80-fold the adhesion of the wild type to maize roots. The results suggest that N-acetyl glucosamine residues of the LPS O-antigen bind to maize root lectins, an essential step for efficient bacterial attachment and colonization.

The Disruptive Effect of Lysozyme on the Bacterial Cell Wall Explored by an "In-Silico" Structural Outlook

Science.gov (United States)

Primo, Emiliano D.; Otero, Lisandro H.; Ruiz, Francisco; Klinke, Sebastián; Giordano, Walter

2018-01-01

The bacterial cell wall, a structural unit of peptidoglycan polymer comprised of glycan strands consisting of a repeating disaccharide motif [N-acetylglucosamine (NAG) and N-acetylmuramylpentapeptide (NAM pentapeptide)], encases bacteria and provides structural integrity and protection. Lysozymes are enzymes that break down the bacterial cell wall…

Enhancement of Exochitinase Production by Bacillus licheniformis AT6 Strain and Improvement of N-Acetylglucosamine Production.

Science.gov (United States)

Aounallah, Mohamed Amine; Slimene-Debez, Imen Ben; Djebali, Kais; Gharbi, Dorra; Hammami, Majdi; Azaiez, Sana; Limam, Ferid; Tabbene, Olfa

2017-02-01

A strain producing chitinase, isolated from potato stem tissue, was identified as Bacillus licheniformis by biochemical properties and 16S RNA sequence analysis. Statistical experimental designs were used to optimize nine independent variables for chitinase production by B. licheniformis AT6 strain in submerged fermentation. Using Plackett-Burman design, (NH 4 ) 2 SO 4 , MgSO 4 .7H 2 O, colloidal chitin, MnCl 2 2H 2 O, and temperature were found to influence chitinase production significantly. According to Box-Behnken response surface methodology, the optimal fermentation conditions allowing maximum chitinase production were (in gram per liter): (NH 4 ) 2 SO 4 , 7; K 2 HPO 4 , 1; NaCl, 1; MgSO 4 .7H 2 O, 0.1; yeast extract, 0.5; colloidal chitin, 7.5; MnCl 2 .2H 2 O, 0.2; temperature 35 °C; pH medium 7. The optimization strategy led to a 10-fold increase in chitinase activity (505.26 ± 22.223 mU/mL versus 50.35 ± 19.62 mU/mL for control basal medium). A major protein band with a molecular weight of 61.9 kDa corresponding to chitinase activity was clearly detected under optimized conditions. Chitinase activity produced in optimized medium mainly releases N-acetyl glucosamine (GlcNAc) monomer from colloidal chitin. This enzyme also acts as an exochitinase with β-N-acetylglucosaminidase. These results suggest that B. licheniformis AT6 secreting exochitinase is highly efficient in GlcNAc production which could in turn be envisaged as a therapeutic agent or as a conservator against the alteration of several ailments.

EFFECTS OF MUCUNA ( MUCUNA UTILIS L.) RESIDUE ...

African Journals Online (AJOL)

The field experiment was conducted at two locations: University of Agriculture, Abeokuta (UNAAB) and Olowo-Papa (OP) in Ogun state both in Forest-savannah transition zone of Nigeria to investigate the response of three upland rice cultivars (O.sativa) to mucuna residue incorporation and Nitrogen (N) fertilizer and the ...

Genetics Home Reference: mucolipidosis II alpha/beta

Science.gov (United States)

... Mucolipidosis II (I-cell disease) and mucolipidosis IIIA (classical pseudo-hurler polydystrophy) are caused by mutations in ... N-acetylglucosamine-1-phosphotransferase gene (GNPTAB) in a French Canadian founder population. Clin Genet. 2008 Mar;73( ...

Natural radioactivity in petroleum residues

International Nuclear Information System (INIS)

Gazineu, M.H.P.; Gazineu, M.H.P.; Hazin, C.A.; Hazin, C.A.

2006-01-01

The oil extraction and production industry generates several types of solid and liquid wastes. Scales, sludge and water are typical residues that can be found in such facilities and that can be contaminated with Naturally Occurring Radioactive Material (N.O.R.M.). As a result of oil processing, the natural radionuclides can be concentrated in such residues, forming the so called Technologically Enhanced Naturally Occurring Radioactive Material, or T.E.N.O.R.M.. Most of the radionuclides that appear in oil and gas streams belong to the 238 U and 232 Th natural series, besides 40 K. The present work was developed to determine the radionuclide content of scales and sludge generated during oil extraction and production operations. Emphasis was given to the quantification of 226 Ra, 228 Ra and 40 K since these radionuclides,are responsible for most of the external exposure in such facilities. Samples were taken from the P.E.T.R.O.B.R.A.S. unity in the State of Sergipe, in Northeastern Brazil. They were collected directly from the inner surface of water pipes and storage tanks, or from barrels stored in the waste storage area of the E and P unit. The activity concentrations for 226 Ra, 228 Ra and 40 K were determined by using an HP Ge gamma spectrometric system. The results showed concentrations ranging from 42.7 to 2,110.0 kBq/kg for 226 Ra, 40.5 to 1,550.0 kBq/kg for 228 Ra, and 20.6 to 186.6 kBq/kg for 40 K. The results highlight the importance of determining the activity concentration of those radionuclides in oil residues before deciding whether they should be stored or discarded to the environment. (authors)

Simulation of Weld Mechanical Behavior to Include Welding-Induced Residual Stress and Distortion: Coupling of SYSWELD and Abaqus Codes

Science.gov (United States)

2015-11-01

Memorandum Simulation of Weld Mechanical Behavior to Include Welding-Induced Residual Stress and Distortion: Coupling of SYSWELD and Abaqus Codes...Weld Mechanical Behavior to Include Welding-Induced Residual Stress and Distortion: Coupling of SYSWELD and Abaqus Codes by Charles R. Fisher...Welding- Induced Residual Stress and Distortion: Coupling of SYSWELD and Abaqus Codes 5a. CONTRACT NUMBER N/A 5b. GRANT NUMBER N/A 5c

Release of nitrogen precursors from coal and biomass residues in a bubbling fluidized bed

Energy Technology Data Exchange (ETDEWEB)

P. Abelha; I. Gulyurtlu; I. Cabrita [Instituto Nacional de Engenharia, Lisbon (Portugal)

2008-01-15

This work was undertaken with the aim of quantifying the relative amounts of NH{sub 3} and HCN released from different residues during their devolatilization under fluidized bed conditions. The results were compared with data collected for bituminous coals of different origin. The relation between amounts of HCN and NH{sub 3} released and the levels of NOX and N{sub 2}O formed during cocombustion was also addressed. The partitioning of nitrogen between volatiles and char was also quantified. The pyrolysis studies were undertaken in a small fluidized bed reactor of 80 mm of ID and 500 mm high using an inert atmosphere (N{sub 2}). The HCN and NH{sub 3} were quantified by bubbling the pyrolysis gases in absorbing solutions which were subsequently analyzed with selective electrodes. The combustion studies were carried out on a pilot installation. The fluidized bed combustor is square in cross section with each side being 300 mm long. There is secondary air supply to the freeboard at different heights to deal with high volatile fuels as almost all waste materials are. The temperatures in the bed and in the freeboard and that of the flue gases leaving the reactor were continuously monitored. The results obtained suggest that, while coal releases nitrogen mostly as HCN, residues like RDF and sewage sludge give out fuel-N in greater quantities as NH{sub 3}. Residues at fluidized bed combustion (FBC) temperatures release more than 80% of the fuel-N with the volatiles. The NH{sub 3} evolved during pyrolysis acted as a reducing agent on NOX emissions. The presence of calcium significantly reduces the emission of N{sub 2}O probably by interfering with HCN chemistry. With high amounts of residues in the fuel mixture, the relative importance of char on the nitrogen chemistry substantially decreases. By using cocombustion, it is possible to reduce fuel-N conversion to NOX and N{sub 2}O, by tuning the amounts of coal and residue in the mixture. 29 refs., 18 figs., 3 tabs.

Effect of cooking on enrofloxacin residues in chicken tissue.

Science.gov (United States)

Lolo, M; Pedreira, S; Miranda, J M; Vázquez, B I; Franco, C M; Cepeda, A; Fente, C

2006-10-01

The aim of this study was to determine the effect of different cooking processes (microwaving, roasting, boiling, grilling and frying) on naturally incurred enrofloxacin residues in chicken muscle. Enrofloxacin and its metabolite, ciprofloxacin, were analysed using a validated LC-MS method with limits of detection (LOD) and quantification (LOQ), respectively, of 2 and 5 ng g-1 quinolones in muscle samples. The method was shown to be linear over the range 5-500 ng g-1. Mean intra-day relative standard deviation (RSD) at a concentration of 50 ng g-1 (n = 6) was 6%; inter-day RSD was 12%. A recovery study demonstrated that 65-101%, of the drug and metabolite could be recovered from the tissue. The RSD with naturally incurred roasted chicken breast was 9.18% at a concentration of 11 +/- 1.01 ng g-1 (n = 6). In water, enrofloxacin remained stable for 3 h when heated at 100 degrees C. It was concluded that residue data from raw tissue are valid for estimation of consumer exposure to this drug, as well as the ADI calculations because cooking procedures did not affect enrofloxacin residues, which remained stable during heating. However, there was an apparent decrease in quinolone concentration in tissue because some was lost by exudation into the liquid used for cooking. Conversely, for a cooking procedure with water loss, there was an apparent increase in residue concentration.

Interception of residual nitrate from a calcareous alluvial soil profile on the North China Plain by deep-rooted crops: A {sup 15}N tracer study

Energy Technology Data Exchange (ETDEWEB)

Ju, X.T. [Key Laboratory of Plant-Soil Interactions, Ministry of Education, College of Agricultural Resources and Environmental Sciences, China Agricultural University, 2 Yuan Ming Yuan West Road, Hai Dian District, Beijing 100094 (China)]. E-mail: juxt@cau.edu.cn; Gao, Q. [Key Laboratory of Plant-Soil Interactions, Ministry of Education, College of Agricultural Resources and Environmental Sciences, China Agricultural University, 2 Yuan Ming Yuan West Road, Hai Dian District, Beijing 100094 (China); College of Agricultural Resources and Environmental Sciences, Jilin Agricultural University, Changchun 130118 (China); Christie, P. [Key Laboratory of Plant-Soil Interactions, Ministry of Education, College of Agricultural Resources and Environmental Sciences, China Agricultural University, 2 Yuan Ming Yuan West Road, Hai Dian District, Beijing 100094 (China); Agricultural and Environmental Science Department, Queen' s University Belfast, Belfast BT9 5PX (United Kingdom); Zhang, F.S. [Key Laboratory of Plant-Soil Interactions, Ministry of Education, College of Agricultural Resources and Environmental Sciences, China Agricultural University, 2 Yuan Ming Yuan West Road, Hai Dian District, Beijing 100094 (China)

2007-03-15

{sup 15}N-labeled nitrate was injected into different depths of an alluvial calcareous soil profile on the North China Plain. Subsequent movement of NO{sub 3} {sup -}N and its recovery by deep-rooted maize (Zea mays L.) and shallow-rooted eggplant (Solanum melongena L.) were studied. Under conventional water and nutrient management the mean recoveries of {sup 15}N-labeled nitrate from K{sup 15}NO{sub 3} injected at depths 15, 45, and 75 cm were 22.4, 13.8, and 7.8% by maize and 7.9, 4.9, and 2.7% by eggplant. The recovery rate by maize at each soil depth was significantly higher than by eggplant. The deeper the injection of nitrate the smaller the distance of its downward movement and this corresponded with the movement of soil water during crop growth. Deeper rooting crops with high root length density and high water consumption may therefore be grown to utilize high concentrations of residual nitrate in the subsoil from previous intensive cropping and to protect the environment. - Deep-rooted crops have a greater capacity than shallow-rooted crops to intercept residual nitrate from the subsoil and restrict its movement down to the shallow groundw0010at.

Development of an enzyme-linked immunosorbent assay-based method for measuring galactosyltransferase activity using a synthetic glycopolymer acceptor substrate.

Science.gov (United States)

Oubihi, M; Kitajima, K; Kobayashi, K; Adachi, T; Aoki, N; Matsuda, T

1998-03-15

A lectin-assisted enzyme-linked immunosorbent assay (ELISA)-based method using a synthetic glycopolymer as an acceptor substrate was developed for measuring beta 1,4-galactosyltransferase (GalT) activity. A polyacrylamide derivative having a beta-linked N-acetylglucosamine (GlcNAc beta) moiety on each monomeric unit was synthesized chemically and immobilized on a polystyrene microtiter plate as an acceptor substrate for GalT. After the plate was incubated with bovine GalT, the enzyme reaction product, beta-linked Gal residue on the polyacrylamide-bound GlcNAc residue, was detected by using Ricinus communis agglutinin 1 (RCA1), rabbit anti-RCA1 antibody, and a peroxidase-labeled anti-rabbit IgG. The lowest GalT concentration detectable by this method was about 0.5 mU/ml, which is comparable to those by the previously reported ELISA-based assays. The unique property of the glycopolymer, PAP(GlcNAc beta), of binding noncovalently but tightly to the polystyrene microtiter plate allowed the use of this acceptor substrate for the GalT activity measurement even in the presence of 1% Triton CF-54 and X-100. Our system was successfully applied to assess GalT activity in milk of various mammals.

Biomass decomposition and nutrient release from black oat and hairy vetch residues deposited in a vineyard

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Paulo Ademar Avelar Ferreira

2014-10-01

Full Text Available A significant quantity of nutrients in vineyards may return to the soil each year through decomposition of residues from cover plants. This study aimed to evaluate biomass decomposition and nutrient release from residues of black oats and hairy vetch deposited in the vines rows, with and without plastic shelter, and in the between-row areas throughout the vegetative and productive cycle of the plants. The study was conducted in a commercial vineyard in Bento Gonçalves, RS, Brazil, from October 2008 to February 2009. Black oat (Avena strigosa and hairy vetch (Vicia villosa residues were collected, subjected to chemical (C, N, P, K, Ca, and Mg and biochemical (cellulose - Cel, hemicellulose - Hem, and lignin - Lig content analyses, and placed in litter bags, which were deposited in vines rows without plastic shelter (VPRWS, in vines rows with plastic shelter (VPRS, and in the between-row areas (BR. We collected the residues at 0, 33, 58, 76, and 110 days after deposition of the litter bags, prepared the material, and subjected it to analysis of total N, P, K, Ca, and Mg content. The VPRS contained the largest quantities and percentages of dry matter and residual nutrients (except for Ca in black oat residues from October to February, which coincides with the period from flowering up to grape harvest. This practice led to greater protection of the soil surface, avoiding surface runoff of the solution derived from between the rows, but it retarded nutrient cycling. The rate of biomass decomposition and nutrient release from hairy vetch residues from October to February was not affected by the position of deposition of the residues in the vineyard, which may especially be attributed to the lower values of the C/N and Lig/N ratios. Regardless of the type of residue, black oat or hairy vetch, the greatest decomposition and nutrient release mainly occurred up to 33 days after deposition of the residues on the soil surface, which coincided with the

Láser in situ keratomileusis en la corrección de miopía y astigmatismo residual posqueratotomía radial en casos seleccionados Laser in situ keratomileusis to correct myopia and residual astigmatism after radial keratotomy in selected cases

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Eneida Pérez Candelaria

2010-01-01

Full Text Available OBJETIVO: Evaluar la seguridad y la eficacia del tratamiento con láser in situ keratomileusis en pacientes con defectos residuales posqueratotomía radial. MÉTODOS: Se realizó un estudio descriptivo de tipo prospectivo longitudinal a 55 ojos de 31 pacientes con miopía y/o astigmatismo residuales posqueratotomía radial reoperados con láser in situ keratomileusis en el Servicio de Cirugía Refractiva del Instituto Cubano de Oftalmología "Ramón Pando Ferrer" desde enero a junio del 2007. En la selección de los pacientes, se utilizaron estrictos criterios de inclusión y exclusión utilizándose las variables: error refractivo residual en equivalente esférico medio, la agudeza visual sin corrección y la mejor agudeza visual corregida preLASIK y posLASIK, así como las complicaciones transoperatorias y postoperatorias. El seguimiento promedio de los pacientes fue de 12 ± 3 meses. RESULTADOS: El equivalente esférico posLASIK disminuyó notablemente en el primer día del posoperatorio y se mantuvo estable en la última consulta. La agudeza visual sin corrección posLASIK fue 1,0 (20/20 en 22 ojos (40 % y > 0,5 (20/40 en 44 ojos (80 %. En 11 ojos (20 %, la mejor agudeza visual corregida mejoró 1 línea en la cartilla de Snellen. Se presentócomo complicación intraoperatoria un ojo con perforación central del flap corneal y dentro de las complicaciones postoperatorias se reportaron detritus y restos hemáticos en la interfase en 2 ojos, pliegues finos del colgajo en un solo ojo y epitelización de la interfase fuera del eje visual igualmente, en un solo ojo. CONCLUSIONES: El Láser in situ keratomileusis puede ser usado exitosamente en la corrección de la miopía y el astigmatismo posqueratotomía radial en casos debidamente seleccionados.OBJECTIVE: To evaluate the safety and the efficacy of the Laser in Situ Keratomileusis treatment in patients with residual defects after radial keratotomy. METHODS: A prospective, longitudinal and

Feline Immunodeficiency Virus Vif N-Terminal Residues Selectively Counteract Feline APOBEC3s.

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Gu, Qinyong; Zhang, Zeli; Cano Ortiz, Lucía; Franco, Ana Cláudia; Häussinger, Dieter; Münk, Carsten

2016-12-01

Feline immunodeficiency virus (FIV) Vif protein counteracts feline APOBEC3s (FcaA3s) restriction factors by inducing their proteasomal degradation. The functional domains in FIV Vif for interaction with FcaA3s are poorly understood. Here, we have identified several motifs in FIV Vif that are important for selective degradation of different FcaA3s. Cats (Felis catus) express three types of A3s: single-domain A3Z2, single-domain A3Z3, and double-domain A3Z2Z3. We proposed that FIV Vif would selectively interact with the Z2 and the Z3 A3s. Indeed, we identified two N-terminal Vif motifs (12LF13 and 18GG19) that specifically interacted with the FcaA3Z2 protein but not with A3Z3. In contrast, the exclusive degradation of FcaA3Z3 was regulated by a region of three residues (M24, L25, and I27). Only a FIV Vif carrying a combination of mutations from both interaction sites lost the capacity to degrade and counteract FcaA3Z2Z3. However, alterations in the specific A3s interaction sites did not affect the cellular localization of the FIV Vif protein and binding to feline A3s. Pulldown experiments demonstrated that the A3 binding region localized to FIV Vif residues 50 to 80, outside the specific A3 interaction domain. Finally, we found that the Vif sites specific to individual A3s are conserved in several FIV lineages of domestic cat and nondomestic cats, while being absent in the FIV Vif of pumas. Our data support a complex model of multiple Vif-A3 interactions in which the specific region for selective A3 counteraction is discrete from a general A3 binding domain. Both human immunodeficiency virus (HIV) and feline immunodeficiency virus (FIV) Vif proteins counteract their host's APOBEC3 restriction factors. However, these two Vif proteins have limited sequence homology. The molecular interaction between FIV Vif and feline APOBEC3s are not well understood. Here, we identified N-terminal FIV Vif sites that regulate the selective interaction of Vif with either feline APOBEC3Z

Evaluation and optimization of nutritional and environmental impact of biogas residues; Bewertung und Optimierung der Naehrstoff- und Umweltwirkung von Gaerrueckstaenden aus der Biogasgewinnung

Energy Technology Data Exchange (ETDEWEB)

Lichti, Fabian Heribert

2013-04-29

On the basis of the dynamic growth of biogas plants in Germany the fertilization with biogas residues has obtained an important role for recirculation of plant nutrients, particularly with regard to nitrogen. In this work the effect of N nutrition with biogas residues was assessed in a 3-year on-field trial conducted at four sites throughout Bavaria. The fertilizing effects were tested by varying rate and time of biogas residues application, using different application techniques and the addition of nitrification inhibitors on several crops. The biogas residues achieved mineral fertilizer equivalents of 30 - 45 %. Overall, the untreated biogas residues showed a slightly increased N efficiency compared to cattle manure, whereas particularly site-dependent differences resulted in large differences in N efficiency of biogas residues.

Oligosaccharides Derived from Sucrose

Science.gov (United States)

Monsan, Pierre F.; Ouarné, Francois

Sucrose is a non-reducing disaccharide, consisting of an α-D-glucopyranosyl residue and a β-D-fructofuranosyl residue linked covalently by their respective anomeric carbons (α-D-glucopyranosyl-1,2-β-D-fructofuranoside). It is not just a simple disaccharide, among others: in fact, the energy of its glycosidic bond is higher than that of a usual glycosidic bond. It is equal to 27.6 kJ/mol, which is similar to the energy of a nucleotide-sugar bond as in UDP-glucose or ADP-glucose. This means that sucrose is a protected and activated form of D-glucose (as well as of D-fructose), which plays a key role in the metabolism of plants, for a wide variety of synthesis reactions.

The heparin/heparan sulfate sequence that interacts with cyclophilin B contains a 3-O-sulfated N-unsubstituted glucosamine residue.

Science.gov (United States)

Vanpouille, Christophe; Deligny, Audrey; Delehedde, Maryse; Denys, Agnès; Melchior, Aurélie; Liénard, Xavier; Lyon, Malcolm; Mazurier, Joël; Fernig, David G; Allain, Fabrice

2007-08-17

Many of the biological functions of heparan sulfate (HS) proteoglycans can be attributed to specialized structures within HS moieties, which are thought to modulate binding and function of various effector proteins. Cyclophilin B (CyPB), which was initially identified as a cyclosporin A-binding protein, triggers migration and integrin-mediated adhesion of peripheral blood T lymphocytes by a mechanism dependent on interaction with cell surface HS. Here we determined the structural features of HS that are responsible for the specific binding of CyPB. In addition to the involvement of 2-O,6-O, and N-sulfate groups, we also demonstrated that binding of CyPB was dependent on the presence of N-unsubstituted glucosamine residues (GlcNH2), which have been reported to be precursors for sulfation by 3-O-sulfotransferases-3 (3-OST-3). Interestingly, 3-OST-3B isoform was found to be the main 3-OST isoenzyme expressed in peripheral blood T lymphocytes and Jurkat T cells. Moreover, down-regulation of the expression of 3-OST-3 by RNA interference potently reduced CyPB binding and consequent activation of p44/42 mitogen-activated protein kinases. Altogether, our results strongly support the hypothesis that 3-O-sulfation of GlcNH2 residues could be a key modification that provides specialized HS structures for CyPB binding to responsive cells. Given that 3-O-sulfation of GlcNH2-containing HS by 3-OST-3 also provides binding sites for glycoprotein gD of herpes simplex virus type I, these findings suggest an intriguing structural linkage between the HS sequences involved in CyPB binding and viral infection.

O-GlcNAcase Expression is Sensitive to Changes in O-GlcNAc Homeostasis.

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Zhang, Zhen; Tan, Ee Phie; VandenHull, Nicole J; Peterson, Kenneth R; Slawson, Chad

2014-01-01

O-linked N-acetylglucosamine (O-GlcNAc) is a post-translational modification involving an attachment of a single β-N-acetylglucosamine moiety to serine or threonine residues in nuclear and cytoplasmic proteins. Cellular O-GlcNAc levels are regulated by two enzymes: O-GlcNAc transferase (OGT) and O-GlcNAcase (OGA), which add and remove the modification, respectively. The levels of O-GlcNAc can rapidly change in response to fluctuations in the extracellular environment; however, O-GlcNAcylation returns to a baseline level quickly after stimulus removal. This process termed O-GlcNAc homeostasis appears to be critical to the regulation of many cellular functions including cell cycle progress, stress response, and gene transcription. Disruptions in O-GlcNAc homeostasis are proposed to lead to the development of diseases, such as cancer, diabetes, and Alzheimer's disease. O-GlcNAc homeostasis is correlated with the expression of OGT and OGA. We reason that alterations in O-GlcNAc levels affect OGA and OGT transcription. We treated several human cell lines with Thiamet-G (TMG, an OGA inhibitor) to increase overall O-GlcNAc levels resulting in decreased OGT protein expression and increased OGA protein expression. OGT transcript levels slightly declined with TMG treatment, but OGA transcript levels were significantly increased. Pretreating cells with protein translation inhibitor cycloheximide did not stabilize OGT or OGA protein expression in the presence of TMG; nor did TMG stabilize OGT and OGA mRNA levels when cells were treated with RNA transcription inhibitor actinomycin D. Finally, we performed RNA Polymerase II chromatin immunoprecipitation at the OGA promoter and found that RNA Pol II occupancy at the transcription start site was lower after prolonged TMG treatment. Together, these data suggest that OGA transcription was sensitive to changes in O-GlcNAc homeostasis and was potentially regulated by O-GlcNAc.

CO2 Separation and Capture Properties of Porous Carbonaceous Materials from Leather Residues

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Ana Arenillas

2013-10-01

Full Text Available Carbonaceous porous materials derived from leather skin residues have been found to have excellent CO2 adsorption properties, with interestingly high gas selectivities for CO2 (α > 200 at a gas composition of 15% CO2/85% N2, 273K, 1 bar and capacities (>2 mmol·g−1 at 273 K. Both CO2 isotherms and the high heat of adsorption pointed to the presence of strong binding sites for CO2 which may be correlated with both: N content in the leather residues and ultrasmall pore sizes.

CO2 Separation and Capture Properties of Porous Carbonaceous Materials from Leather Residues

Science.gov (United States)

Bermúdez, José M.; Dominguez, Pablo Haro; Arenillas, Ana; Cot, Jaume; Weber, Jens; Luque, Rafael

2013-01-01

Carbonaceous porous materials derived from leather skin residues have been found to have excellent CO2 adsorption properties, with interestingly high gas selectivities for CO2 (α > 200 at a gas composition of 15% CO2/85% N2, 273K, 1 bar) and capacities (>2 mmol·g−1 at 273 K). Both CO2 isotherms and the high heat of adsorption pointed to the presence of strong binding sites for CO2 which may be correlated with both: N content in the leather residues and ultrasmall pore sizes. PMID:28788352

Characterization of Bovine Brain ATPase

Science.gov (United States)

1988-07-01

1 51 40 91 SBA 45 72 117 LPA 32 50 82 Con-A 68 38 106 Abbreviation Sugar Specificity WGA= Wheat Germ Agglutinin N-Acetylglucosamine IJEA= Ulex ... Europaeus Agglutinin L-Fucose SBA= Soy Bean Agglutinin D-Galactose LPA= Limulus Polyphemus Agglutinin N-Acetylgalactosamine Con-A= Concanavalin-A, D-Glucose

Characterization of the residues modified when F1 - ATPases are inactivated by 7-chloro-4-nitrobenzofurazan and 5'-[p-(fluorosulfonyl)benzoyl]-1,N6-ethenoadenosine

International Nuclear Information System (INIS)

Verburg, J.G.

1989-01-01

Inactivation of the F 1 -ATPases isolated from spinach chloroplasts (CF 1 ) and from the plasma membrane of the thermophilic bacterium, PS3 (TF 1 ) with 7-chloro-4-nitrobenzofurazan (Nbf-Cl) results in modification of Tyr-β-328 and Tyr-β-307, respectively. These residues are homologous to Tyr-β-311 of the F 1 -ATPase isolated from beef heart mitochondria, previously identified as the residue derivatized during inactivation of that enzyme with Nbf-Cl. Interestingly, an intramolecular migration of the Nbf- moiety from the tyrosine residue to a nearby lysine residue, observed when MF 1 and TF 1 which had been inactivated with Nbf-Cl are incubated at alkaline pH, was not observed when CF 1 was treated in the same manner. CF 1 differs from other ATPases in that it contains ADP, tightly bound at a single catalytic site. It is possible that this tightly bound ADP prevents migration of the Nbf moiety. The characteristics of inactivation of MF 1 with the fluorosulfonyl benzoyl derivatives of adenosine (FSBA) and inosine (FSBI) have been described in the literature. Inactivation of MF 1 with FSBA results in the mutually exclusive modification of Tyr-368 or His-427 in all three copies of the β subunit. These residues comprise part of the noncatalytic nucleotide binding site. Inactivation of MF 1 with FSBI results in modification of Tyr-β-345 in a single catalytic site. The fluorosulfonyl benzoyl derivative of 1,N 6 -ethenoadenosine (FSBεA) has been prepared, and the characteristics and selectivity of modification of MF 1 with this reagent are presented. FSBεA binds reversibly to MF 1 with an apparent dissociation constant of 250 μM before covalent modification. The residue in MF 1 that reacts with FSBεA exhibits an apparent pK a of 8.9

Easy and unambiguous sequential assignments of intrinsically disordered proteins by correlating the backbone 15N or 13C′ chemical shifts of multiple contiguous residues in highly resolved 3D spectra

International Nuclear Information System (INIS)

Yoshimura, Yuichi; Kulminskaya, Natalia V.; Mulder, Frans A. A.

2015-01-01

Sequential resonance assignment strategies are typically based on matching one or two chemical shifts of adjacent residues. However, resonance overlap often leads to ambiguity in resonance assignments in particular for intrinsically disordered proteins. We investigated the potential of establishing connectivity through the three-bond couplings between sequentially adjoining backbone carbonyl carbon nuclei, combined with semi-constant time chemical shift evolution, for resonance assignments of small folded and larger unfolded proteins. Extended sequential connectivity strongly lifts chemical shift degeneracy of the backbone nuclei in disordered proteins. We show here that 3D (H)N(COCO)NH and (HN)CO(CO)NH experiments with relaxation-optimized multiple pulse mixing correlate up to seven adjacent backbone amide nitrogen or carbonyl carbon nuclei, respectively, and connections across proline residues are also obtained straightforwardly. Multiple, recurrent long-range correlations with ultra-high resolution allow backbone 1 H N , 15 N H , and 13 C′ resonance assignments to be completed from a single pair of 3D experiments

Evaluating residues from batai trees (Paraserianthes falcataria) as alternative sources of nitrogen for grain corn (zeas mays l.) in the humid tropics

International Nuclear Information System (INIS)

Zaharah, A.R.; Chintu, R.; Ghizan, S.

2002-01-01

The use of chemical fertilizers for mitigating N deficiency is unsustainable in many tropical areas because of economic constraints and possible deleterious effects on environmental quality. Although organic inputs such as green manures and litter from legumes have shown some potential for improving soil N status, the synchrony of N release from these residues with crop demand needs to be seriously addressed. The potential of above- and below-ground residues of Batai (Paraserianthes falcataria) to improve soil N availability and uptake by corn in an Ultisol (Bungor series) was evaluated under field and controlled conditions. The effect of residue quality on the kinetics of N release and accumulation in the soil was studied in field and laboratory incubation studies, whilst N uptake by grain corn was quantified using direct and indirect 1 5 N isotope labeling techniques. Treatments consist of fresh leaves, roots and 1:1 mixture of roots and leaves of Batai. Residue quality in terms of lignin + polyphenol-to-N ratio, and N mineralization was in the order roots 3 -N leaching occurred between 30 and 60 days after treatment (DAT). Significant amounts of Ca, Mg and K were also leached beyond 20 cm after 60 days. Both 15 N-labeling methods showed that N recovery in corn was much higher in the root than the leaf treatments. However, integrating Batai residues with an inorganic N source could be a more effective management strategy for improving N use efficiency and mitigating soil acidity. (Author)

Evaluation of residue-residue contact predictions in CASP9

KAUST Repository

Monastyrskyy, Bohdan; Fidelis, Krzysztof; Tramontano, Anna; Kryshtafovych, Andriy

2011-01-01

This work presents the results of the assessment of the intramolecular residue-residue contact predictions submitted to CASP9. The methodology for the assessment does not differ from that used in previous CASPs, with two basic evaluation measures

Conditions Inducing Excessive O-GlcNAcylation Inhibit BMP2-Induced Osteogenic Differentiation of C2C12 Cells.

Science.gov (United States)

Gu, Hanna; Song, Mina; Boonanantanasarn, Kanitsak; Baek, Kyunghwa; Woo, Kyung Mi; Ryoo, Hyun-Mo; Baek, Jeong-Hwa

2018-01-09

Hyperglycemic conditions in diabetic patients can affect various cellular functions, including the modulation of osteogenic differentiation. However, the molecular mechanisms by which hyperglycemia affects osteogenic differentiation are yet to be clarified. This study aimed to investigate whether the aberrant increase in protein O -linked-β- N -acetylglucosamine glycosylation ( O -GlcNAcylation) contributes to the suppression of osteogenic differentiation due to hyperglycemia. To induce osteogenic differentiation, C2C12 cells were cultured in the presence of recombinant human bone morphogenetic protein 2 (BMP2). Excessive protein O -GlcNAcylation was induced by treating C2C12 cells with high glucose, glucosamine, or N -acetylglucosamine concentrations or by O -GlcNAc transferase (OGT) overexpression. The effect of O -GlcNAcylation on osteoblast differentiation was then confirmed by examining the expression levels of osteogenic marker gene mRNAs, activity of alkaline phosphatase, and transcriptional activity of Runx2, a critical transcription factor for osteoblast differentiation and bone formation. Cell treatment with high glucose, glucosamine or N -acetylglucosamine increased O -GlcNAcylation of Runx2 and the total levels of O -GlcNAcylated proteins, which led to a decrease in the transcriptional activity of Runx2, expression levels of osteogenic marker genes (Runx2, osterix, alkaline phosphatase, and type I collagen), and activity of alkaline phosphatase. These inhibitory effects were rescued by lowering protein O -GlcNAcylation levels by adding STO45849, an OGT inhibitor, or by overexpressing β- N -acetylglucosaminidase. Our findings suggest that excessive protein O -GlcNAcylation contributes to high glucose-suppressed osteogenic differentiation.

Decomposition of dilute residual active chlorine in sea-water

International Nuclear Information System (INIS)

Yoshinaga, Tetsutaro; Kawano, Kentaro; Yanagase, Kenjiro; Shiga, Akira

1985-01-01

Coastal industries such as power stations require enormous quantities of sea-water for cooling, but the marine organisms in it often result in fouling and/or blockade of the circulating water condenser and pipeworks. To prevent this, chlorine, or hypochlorite by the direct electrolysis of sea-water have been added. Environmental concerns, however, dictate that the residual chlorine concentration at the outlet should be less than the regulated value (0.02 ppm). Methods for decomposing dilute residual chlorine solutions were therefore studied. It was found that: 1) The addition of (raw) sea-water to the sea-water which passed through the condenser lowered the residual chlorine concentration to an greater extent than could be expected by dilution only. 2) Ozonation of the residual chlorine solution led to degradation of OCl - , but in solutions with a residual chlorine concentrations of less than 3 -- 4 ppm, ozonation had no effect. 3) Irradiation with ultra violet light (254 nm) decomposed the residual chlorine. Under the present work conditions (25 0 C: pH 8; depth 10 mm), nearly first order kinetics were to hold [da/dt = ksub((1)) (1-a)sup(n)]. There is a proportional relationship between the kinetic constant (k) and illuminous intensity (L), i.e., ksub((1))[C 0 sup(Cl 2 ): 10 ppm] = 6.56 x 10 -5 L (L = 0 -- 1000 lx). Thus, the use of both sea-water addition and UV irradiation provides a probable method for decomposing a residual chlorine to the expected concentration. (author)

N-Succinimidyl guanidinomethyl iodobenzoate protein radiohalogenation agents: Influence of isomeric substitution on radiolabeling and target cell residualization

International Nuclear Information System (INIS)

Choi, Jaeyeon; Vaidyanathan, Ganesan; Koumarianou, Eftychia; McDougald, Darryl; Pruszynski, Marek; Osada, Takuya; Lahoutte, Tony; Lyerly, H. Kim; Zalutsky, Michael R.

2014-01-01

Introduction: N-succinimidyl 4-guanidinomethyl-3-[ ⁎ I]iodobenzoate ([ ⁎ I]SGMIB) has shown promise for the radioiodination of monoclonal antibodies (mAbs) and other proteins that undergo extensive internalization after receptor binding, enhancing tumor targeting compared to direct electrophilic radioiodination. However, radiochemical yields for [ 131 I]SGMIB synthesis are low, which we hypothesize is due to steric hindrance from the Boc-protected guanidinomethyl group ortho to the tin moiety. To overcome this, we developed the isomeric compound, N-succinimidyl 3-guanidinomethyl-5-[ 131 I]iodobenzoate (iso-[ 131 I]SGMIB) wherein this bulky group was moved from ortho to meta position. Methods: Boc 2 -iso-SGMIB standard and its tin precursor, N-succinimidyl 3-((1,2-bis(tert-butoxycarbonyl)guanidino)methyl)-5-(trimethylstannyl) benzoate (Boc 2 -iso-SGMTB), were synthesized using two disparate routes, and iso-[*I]SGMIB synthesized from the tin precursor. Two HER2-targeted vectors — trastuzumab (Tras) and a nanobody 5 F7 (Nb) — were labeled using iso-[ ⁎ I]SGMIB and [ ⁎ I]SGMIB. Paired-label internalization assays in vitro with both proteins, and biodistribution in vivo with trastuzumab, labeled using the two isomeric prosthetic agents were performed. Results: When the reactions were performed under identical conditions, radioiodination yields for the synthesis of Boc 2 -iso-[ 131 I]SGMIB were significantly higher than those for Boc 2 -[ 131 I]SGMIB (70.7 ± 2.0% vs 56.5 ± 5.5%). With both Nb and trastuzumab, conjugation efficiency also was higher with iso-[ 131 I]SGMIB than with [ 131 I]SGMIB (Nb, 33.1 ± 7.1% vs 28.9 ± 13.0%; Tras, 45.1 ± 4.5% vs 34.8 ± 10.3%); however, the differences were not statistically significant. Internalization assays performed on BT474 cells with 5 F7 Nb indicated similar residualizing capacity over 6 h; however, at 24 h, radioactivity retained intracellularly for iso-[ 131 I]SGMIB-Nb was lower than for [ 125 I]SGMIB-Nb (46

Nutrient removal capacity of wood residues for the Agro-environmental safety of ground and surface waters

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Paulo A. Dumont

2014-07-01

Full Text Available The aim of this study was to determine the effectiveness of wood residues in the removal of nutrients (ammonium-N; NH4-N from nutrient-rich (NH4-N waters. The water holding capacity of the wood materials was also determined. Carried out at Rothamsted Research, North Wyke, UK, this controlled laboratory experiment tested two wood residues; in length, one being 1-2cm and the other from 150 µm (microns to 9.5mm. Although a wide range of studies have shown the effectiveness and performance of various absorbent materials as animal beddings, such as straw (cereal straw, woodchip (sawdust, bark or wood shavings, bracken and rushes, only few have focused on the NH4-N sorption/desorption capacity. The depuration capacity of wood residues from nutrient-rich effluents such as those from cattle bedded on woodchip or straw will be controlled by processes such as sorption (adsorption-absorption and desorption of nutrients. Studies have reported the nitrogen removal capacity of woodchip materials and biochar from woodchip as well as removal of NH4+-N from domestic and municipal wastewater, farm dirty water, landfill and industry effluents. These studies have observed that the mechanism of removal of nitrogen is by either increasing NO3--N removal form leachate by enhancing N2O losses via denitrification (biochar as carbon source for denitrifiers or by decreasing NH4+-N in leachate through adsorption to negatively charged sites. Results showed that although the cation exchange capacity (CEC and surface area (SA are both fundamental properties of adsorbent materials, no correlation was found with CEC and adsorption or desorption. Nor did changes in pH appear to be sufficiently important to cause changes in CEC. For this reason, osmotic pressure appeared to be a more predominant parameter controlling processes of adsorption and desorption of NH4+-N in both wood residues. Thus, wood residues high in NH4+-N should be avoided, as they could have an opposite effect

Critical residues in the PMEL/Pmel17 N-terminus direct the hierarchical assembly of melanosomal fibrils

Science.gov (United States)

Leonhardt, Ralf M.; Vigneron, Nathalie; Hee, Jia Shee; Graham, Morven; Cresswell, Peter

2013-01-01

PMEL (also called Pmel17 or gp100) is a melanocyte/melanoma-specific glycoprotein that plays a critical role in melanosome development by forming a fibrillar amyloid matrix in the organelle for melanin deposition. Although ultimately not a component of mature fibrils, the PMEL N-terminal region (NTR) is essential for their formation. By mutational analysis we establish a high-resolution map of this domain in which sequence elements and functionally critical residues are assigned. We show that the NTR functions in cis to drive the aggregation of the downstream polycystic kidney disease (PKD) domain into a melanosomal core matrix. This is essential to promote in trans the stabilization and terminal proteolytic maturation of the repeat (RPT) domain–containing MαC units, precursors of the second fibrillogenic fragment. We conclude that during melanosome biogenesis the NTR controls the hierarchical assembly of melanosomal fibrils. PMID:23389629

N-glycosylation by N-acetylglucosaminyltransferase V enhances the interaction of CD147/basigin with integrin β1 and promotes HCC metastasis.

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Cui, Jian; Huang, Wan; Wu, Bo; Jin, Jin; Jing, Lin; Shi, Wen-Pu; Liu, Zhen-Yu; Yuan, Lin; Luo, Dan; Li, Ling; Chen, Zhi-Nan; Jiang, Jian-Li

2018-05-01

While the importance of protein N-glycosylation in cancer cell migration is well appreciated, the precise mechanisms by which N-acetylglucosaminyltransferase V (GnT-V) regulates cancer processes remain largely unknown. In the current study, we report that GnT-V-mediated N-glycosylation of CD147/basigin, a tumor-associated glycoprotein that carries β1,6-N-acetylglucosamine (β1,6-GlcNAc) glycans, is upregulated during TGF-β1-induced epithelial-to-mesenchymal transition (EMT), which correlates with tumor metastasis in patients with hepatocellular carcinoma (HCC). Interruption of β1,6-GlcNAc glycan modification of CD147/basigin decreased matrix metalloproteinase (MMP) expression in HCC cell lines and affected the interaction of CD147/basigin with integrin β1. These results reveal that β1,6-branched glycans modulate the biological function of CD147/basigin in HCC metastasis. Moreover, we showed that the PI3K/Akt pathway regulates GnT-V expression and that inhibition of GnT-V-mediated N-glycosylation suppressed PI3K signaling. In summary, β1,6-branched N-glycosylation affects the biological function of CD147/basigin and these findings provide a novel approach for the development of therapeutic strategies targeting metastasis. © 2018 The Authors. The Journal of Pathology published by John Wiley & Sons Ltd on behalf of Pathological Society of Great Britain and Ireland. © 2018 The Authors. The Journal of Pathology published by John Wiley & Sons Ltd on behalf of Pathological Society of Great Britain and Ireland.

Long-term decomposition of sugarcane harvest residues in Sao Paulo state, Brazil

International Nuclear Information System (INIS)

Fortes, Caio; Trivelin, Paulo Cesar Ocheuze; Vitti, Andre Cesar

2012-01-01

Crop residues returned to the soil are important to preserve fertility and sustainability. This research addressed the long-term decomposition of sugarcane post-harvest residues (trash) under reduced tillage, therefore field renewal was performed with herbicide followed by subsoiling and ratoons were deprived of interrow scarification. The trial was conducted in the northern Sao Paulo State, Brazil during four consecutive crops (2005–2008) where litter bags containing 15 N-labeled trash were disposed in the field attempting to simulate two distinct situations: the previous crop trash (PCT) or residues incorporated in the field after tillage, and post-harvest trash (PHT) or the remains of plant-cane harvest. Decomposition rates regarding dry matter (DM), carbon (C), root growth, plant nutrients (N, P, K, Ca, Mg and S), lignin (LIG) cellulose (CEL) and hemicellulose (HCEL) contents were assessed for PCT (2005 ndash;2008) and for PHT (2006–2008). There were significant reductions on DM and C:N ratio due to C losses and root growth within the litter bags over time. The DM from PCT and PHT decreased 96% and 73% after four and three crops, respectively, and the higher nutrients release were found for K, Ca and N. The LIG, CEL and HCEL concentrations in PCT decreased 60%, 29%, 70% after four crops and 47%, 35%, 70% from PHT after three crops, respectively. Trash decomposition was driven mainly by residues biochemical composition, root growth within the trash blanket and the climatic conditions during the crop cycles. -- Highlights: ► Degradation of sugarcane previous or post-harvest trash (PCT or PHT) was evaluated. ► Dry matter and C decreased due to microbial and root growth within trash blankets. ► C:N ratio of PCT linearly decreased 23% per year during four consecutive crops. ► Lignin, cellulose and hemicellulose concentration averagely declined 54, 41 and 70%. ► PCT and PHT are long-term sources of C, K, Ca and N to the soil-plant system.

Vision for utilization of livestock residue as bioenergy resource in Japan

International Nuclear Information System (INIS)

Fujino, Junichi; Morita, Akihiro; Matsuoka, Yasunari; Sawayama, Shigeki

2005-01-01

Utilization of livestock residue is important not only for energy recovery and material recycling but also for preventing environmental pollution. This paper focuses on the following options from the viewpoint of the Law on Promoting Proper Management and Use of Livestock Excreta and the Kyoto protocol: energy use from livestock residue, reductions in CO 2 emissions resulting from substitution of fossil fuels, and reduction of other greenhouse gas emissions through appropriate treatment of livestock residue. Bioenergy potential of livestock residue in Japan was estimated to be 167 PJ in the year 2000. This is equivalent to about 0.7% of total primary energy supply. Biogas production with methane fermentation and burning poultry residue at power plants can produce 4.1 TWh of electricity and 46 PJ of heat. The amount of CO 2 substitution for fossil fuels is 6.9 Mt-CO 2 . This corresponds to about 0.6% of total CO 2 emissions in 1990. This also has an additional effect of reducing other greenhouse gas (CH 4 and N 2 O) emissions from conventional treatment of livestock residue. Development of biogas plants, promotion of biogas utilization, and effective use of fertilizer components extracted from livestock residue are expected to gain importance in the future

New tyrosinase inhibitory decapeptide: Molecular insights into the role of tyrosine residues.

Science.gov (United States)

Ochiai, Akihito; Tanaka, Seiya; Imai, Yuta; Yoshida, Hisashi; Kanaoka, Takumi; Tanaka, Takaaki; Taniguchi, Masayuki

2016-06-01

Tyrosinase, a rate-limiting enzyme in melanin biosynthesis, catalyzes the hydroxylation of l-tyrosine to 3,4-dihydroxy-l-phenylalanine (l-dopa) (monophenolase reaction) and the subsequent oxidation of l-dopa to l-dopaquinone (diphenolase reaction). Thus, tyrosinase inhibitors have been proposed as skin-lightening agents; however, many of the existing inhibitors cannot be widely used in the cosmetic industry due to their high cytotoxicity and instability. On the other hand, some tyrosinase inhibitory peptides have been reported as safe. In this study, we found that the peptide TH10, which has a similar sequence to the characterized inhibitory peptide P4, strongly inhibits the monophenolase reaction with a half-maximal inhibitory concentration of 102 μM. Seven of the ten amino acid residues in TH10 were identical to P4; however, TH10 possesses one N-terminal tyrosine, whereas P4 contains three tyrosine residues located at its N-terminus, center, and C-terminus. Subsequent analysis using sequence-shuffled variants indicated that the tyrosine residues located at the N-terminus and center of P4 have little to no contribution to its inhibitory activity. Furthermore, docking simulation analysis of these peptides with mushroom tyrosinase demonstrated that the active tyrosine residue was positioned close to copper ions, suggesting that TH10 and P4 bind to tyrosinase as a substrate analogue. Copyright © 2015 The Society for Biotechnology, Japan. Published by Elsevier B.V. All rights reserved.

Residual stress relief in MAG welded joints of dissimilar steels

International Nuclear Information System (INIS)

Seodek, P.; Brozda, J.; Wang, L.; Withers, P.J.

2003-01-01

This paper addresses the relief of residual stress in welded joints between austenitic and non-alloyed ferritic-pearlitic steels. A series of similar and dissimilar steel joints based on the 18G2A (ferritic-pearlitic) and 1H18N10T (austenitic) steels were produced, some of which were stress relieved by annealing and some by mechanical prestressing. For the as-welded and stress relieved test joints the residual stresses were measured by trepanning. To aid the interpretation of these results, 2D plane stress finite element analysis has been performed to simulate the residual stress relieving methods. Analysis of the results has shown that thermal stress relieving of welded joints between dissimilar steels is not effective and may even increase residual stresses, due to the considerable difference in thermal expansion of the joined steels. It was found that, for the loads imposed, the effectiveness of the mechanical stress relieving of dissimilar steel welded joints was much lower than that of similar steel joints

Biochemical stability of organic matter in soils amended with organic slow N-release fertilizer derived from charred plant residues and ammonoxidized lignin

Science.gov (United States)

Knicker, Heike; de la Rosa, José Maria; López Martín, María; Clemente Barragan, Reyes; Liebner, Falk

2013-04-01

As an important plant nutrient, N that has been removed from the soil by plant growth is replaced mainly by the use of synthetic fertilizers. Although this practice has dramatically increased food production, the unintended costs to the environment and human health due to surplus and inefficient application have also been substantial. Major losses of N to the environment can be minimized if "sustainable" agricultural practices are combined with reasonable fertilization. The latter can be achieved by applying slow N-release fertilizers. Here, the N is incorporated into an organic matrix, which after its amendment to soils, slowly decompose, allowing the liberation of the nutrient. Deriving from organic waste, such an amendment helps to efficiently recycle resources and increases the C sequestration potential of soils. However, in order to turn this approach into a successful strategy, the material has to be bioavailable but still sufficiently recalcitrant to ensure slow and controlled N-release. In the present study, we tested potential slow N-release fertilizers recycled from organic waste for their biochemical stability in soils. They comprised N-rich charred grass residues and N-lignin derived from waste of the pulp and paper industry and enriched in N by ammonoxidation. The substrates were mixed with soil of an Histic Humaquept and subsequently subjected to microbial degradation at 28°C in a Respicond IV Apparatus for 10 weeks. Additionally, soil material without organic amendment and soils mixed with lignin or charcoal both with and without KNO3 were included into the experiment. During the degradation experiment the CO2 production was determined on an hourly base. The degradation rate constants and the mean residence times were calculated using a double exponential decay model (pools with fast and slow turnover). Alterations of the chemical composition of the organic matter during degradation were studied by solid-state 13C NMR spectroscopy. First results

Inhibition of severe acute respiratory syndrome coronavirus replication in a lethal SARS-CoV BALB/c mouse model by stinging nettle lectin, Urtica dioica agglutinin.

Science.gov (United States)

Kumaki, Yohichi; Wandersee, Miles K; Smith, Aaron J; Zhou, Yanchen; Simmons, Graham; Nelson, Nathan M; Bailey, Kevin W; Vest, Zachary G; Li, Joseph K-K; Chan, Paul Kay-Sheung; Smee, Donald F; Barnard, Dale L

2011-04-01

replication was partially characterized. When UDA was exposed to N-acetylglucosamine and then UDA was added to cells just prior to adsorption, UDA did not inhibit the virus infection. These data support the conclusion that UDA might bind to N-acetylglucosamine-like residues present on the glycosylated envelope glycoproteins, thereby preventing virus attachment to cells. Copyright © 2011 Elsevier B.V. All rights reserved.

TAPONAMIENTO DE GOTEROS Y DEL FILTRO DE DISCOS CON AGUA RESIDUAL SANITARIA DE UNA LAGUNA DE MADURACIÓN CLOGGING OF DRIPPERS AND DISC FILTERS BY SEWAGE FROM MATURATION POND

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Rafael Oliveira Batista

2009-06-01

Full Text Available El método de riego localizado, ha sido usado para la aplicación de aguas residuales, debido a la elevada eficiencia en la aplicación del fluido y el bajo riesgo de contaminación del producto agrícola y de los operadores de campo. Sin embargo, los sistemas de riego localizado, poseen emisores que presentan alta susceptibilidad al taponamiento. En el presente trabajo, se analizó el potencial de taponamiento de distintos goteros y del filtro de discos con agua residual sanitaria proveniente de una laguna de maduración, para lo cual, se instaló una plataforma de ensayo con tres modelos de goteros en un filtro de disco de 120 mallas. Análisis físicos, químicos y microbiológicos del agua residual sanitaria tratada fueron realizados, así como evaluaciones de uniformidad de aplicación de agua y del desempeño del sistema de filtración. De los resultados obtenidos, se concluyó que el agua residual sanitaria tratada, presentó un elevado riesgo de taponamiento, tanto de goteros como del filtro de discos; lo que repercutió en una considerable disminución de la uniformidad de la aplicación de agua, siendo la formación de biofilme, el principal factor de taponamiento de goteros. La presencia de partículas orgánicas en el fluido, interfirió en el desempeño del filtro de discos, por lo tanto, el agua residual sanitaria tratada, debe ser sometida a tratamiento químico o biológico para su aplicación a cultivos agrícolas por goteo y periodos de tiempo superiores a 200 horas.The method of trickle irrigation has been used for wastewater application due to its high effluent application efficiency and the low risk of contamination of agricultural products and field operators. However, the trickle irrigation systems have emitters that showed high susceptibility to clogging. This study aimed to analyze the obstruction potential of different drip emitters and filter discs with sewage from a maturation pond. To do so, it was set up bench to

Mineral analysis, anthocyanins and phenolic compounds in wine residues flour

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Bennemann Gabriela Datsch

2016-01-01

Full Text Available This study analyzed the mineral content (N, P, K, S, Ca, Fe, Mg, Mn, Fe and Zn, anthocyanins and phenolic compounds in flours produced from residues of different grape cultivars from the wineries in the Southern region of Brazil. Mineral analysis showed a significant difference for all grape cultivar, with the exception for phosphorus content. Residues from cv. Seibel showed higher levels of N, Cu and Mg. The cultivars Ancelotta, Tanat and Bordô present higher contents of K, Zn, Mn, Fe and Ca. For the concentration of anthocyanins, cultivars Cabernet Sauvignon (114.7 mg / 100g, Tannat (88.5 mg / 100 g and Ancelotta (33.8 mg/100 g had the highest concentrations. The cultivars Pinot Noir (7.0 g AGE / 100 g, Tannat (4.3 g AGE / 100 g, and Ancelotta (3.9 g AGE / 100 g had the highest content of phenolic compounds. Considering these results, it became evident the potential of using the residue of winemaking to produce flour for human consumption, highlighting the grapes ‘Tannat' and ‘Ancellotta'.

[Environment of tryptophan residues in proteins--a factor for stability to oxidative nitrosylation. I. Analysis of primary structure].

Science.gov (United States)

Beda, N V; Nedospasov, A A

2001-01-01

Micellar catalysis under aerobic conditions effectively accelerates oxidative nitrosylation because of solubilization of NO and O2 by protein membranes and hydrophobic nuclei. Nitrosylating intermediates NOx (NO2, N2O3, N2O4) form mainly in the hydrophobic phase, and therefore their solubility in aqueous phase is low and hydrolysis is rapid, local concentration of NOx in the hydrophobic phase being essentially higher than in aqueous. Tryptophan is a hydrophobic residue and can nitrosylate with the formation of isomer N-nitrosotryptophans (NOW). Without denitrosylation mechanism, the accumulation of NOW in proteins of NO-synthesizing organisms would be constant, and long-living proteins would contain essential amounts of NOW, which is however not the case. Using Protein Data Bank (more than 78,000 sequences) we investigated the distribution of tryptophan residues environment (22 residues on each side of polypeptide chain) in proteins with known primary structure. Charged and polar residues (D, H, K, N, Q, R, S) are more incident in the immediate surrounding of tryptophan (-6, -5, -2, -1, 1, 2, 4) and hydrophobic residues (A, F, I, L, V, Y) are more rare than in remote positions. Hence, an essential part of tryptophan residues is situated in hydrophilic environment, which decreases the nitrosylation velocity because of lower NOx concentration in aqueous phase and allows the denitrosylation reactions course via nitrosonium ion transfer on nucleophils of functional groups of protein and low-molecular compounds in aqueous phase.

Short-term contributions of cover crop surface residue return to soil carbon and nitrogen contents in temperate Australia.

Science.gov (United States)

Zhou, Xiaoqi; Wu, Hanwen; Li, Guangdi; Chen, Chengrong

2016-11-01

Cover crop species are usually grown to control weeds. After cover crop harvest, crop residue is applied on the ground to improve soil fertility and crop productivity. Little information is available about quantifying the contributions of cover crop application to soil total carbon (C) and nitrogen (N) contents in temperate Australia. Here, we selected eight cover crop treatments, including two legume crops (vetch and field pea), four non-legume crops (rye, wheat, Saia oat, and Indian mustard), a mixture of rye and vetch, and a nil-crop control in temperate Australia to calculate the contributions of cover crops (crop growth + residue decomposition) to soil C and N contents. Cover crops were sown in May 2009 (autumn). After harvest, the crop residue was placed on the soil surface in October 2009. Soil and crop samples were collected in October 2009 after harvest and in May 2010 after 8 months of residue decomposition. We examined cover crop residue biomass, soil and crop total C and N contents, and soil microbial biomass C and N contents. The results showed that cover crop application increased the mean soil total C by 187-253 kg ha -1 and the mean soil total N by 16.3-19.1 kg ha -1 relative to the nil-crop treatment, except for the mixture treatment, which had similar total C and N contents to the nil-crop control. Cover crop application increased the mean soil microbial biomass C by 15.5-20.9 kg ha -1 and the mean soil microbial biomass N by 4.5-10.2 kg ha -1 . We calculated the apparent percentage of soil total C derived from cover crop residue C losses and found that legume crops accounted for 10.6-13.9 %, whereas non-legume crops accounted for 16.4-18.4 % except for the mixture treatment (0.2 %). Overall, short-term cover crop application increased soil total C and N contents and microbial biomass C and N contents, which might help reduce N fertilizer use and improve sustainable agricultural development.

Rigid Residue Scan Simulations Systematically Reveal Residue Entropic Roles in Protein Allostery.

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Robert Kalescky

2016-04-01

Full Text Available Intra-protein information is transmitted over distances via allosteric processes. This ubiquitous protein process allows for protein function changes due to ligand binding events. Understanding protein allostery is essential to understanding protein functions. In this study, allostery in the second PDZ domain (PDZ2 in the human PTP1E protein is examined as model system to advance a recently developed rigid residue scan method combining with configurational entropy calculation and principal component analysis. The contributions from individual residues to whole-protein dynamics and allostery were systematically assessed via rigid body simulations of both unbound and ligand-bound states of the protein. The entropic contributions of individual residues to whole-protein dynamics were evaluated based on covariance-based correlation analysis of all simulations. The changes of overall protein entropy when individual residues being held rigid support that the rigidity/flexibility equilibrium in protein structure is governed by the La Châtelier's principle of chemical equilibrium. Key residues of PDZ2 allostery were identified with good agreement with NMR studies of the same protein bound to the same peptide. On the other hand, the change of entropic contribution from each residue upon perturbation revealed intrinsic differences among all the residues. The quasi-harmonic and principal component analyses of simulations without rigid residue perturbation showed a coherent allosteric mode from unbound and bound states, respectively. The projection of simulations with rigid residue perturbation onto coherent allosteric modes demonstrated the intrinsic shifting of ensemble distributions supporting the population-shift theory of protein allostery. Overall, the study presented here provides a robust and systematic approach to estimate the contribution of individual residue internal motion to overall protein dynamics and allostery.

H9N2 influenza virus acquires intravenous pathogenicity on the introduction of a pair of di-basic amino acid residues at the cleavage site of the hemagglutinin and consecutive passages in chickens

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Sakoda Yoshihiro

2011-02-01

Full Text Available Abstract Background Outbreaks of avian influenza (AI caused by infection with low pathogenic H9N2 viruses have occurred in poultry, resulting in serious economic losses in Asia and the Middle East. It has been difficult to eradicate the H9N2 virus because of its low pathogenicity, frequently causing in apparent infection. It is important for the control of AI to assess whether the H9N2 virus acquires pathogenicity as H5 and H7 viruses. In the present study, we investigated whether a non-pathogenic H9N2 virus, A/chicken/Yokohama/aq-55/2001 (Y55 (H9N2, acquires pathogenicity in chickens when a pair of di-basic amino acid residues is introduced at the cleavage site of its HA molecule. Results rgY55sub (H9N2, which had four basic amino acid residues at the HA cleavage site, replicated in MDCK cells in the absence of trypsin after six consecutive passages in the air sacs of chicks, and acquired intravenous pathogenicity to chicken after four additional passages. More than 75% of chickens inoculated intravenously with the passaged virus, rgY55sub-P10 (H9N2, died, indicating that it is pathogenic comparable to that of highly pathogenic avian influenza viruses (HPAIVs defined by World Organization for Animal Health (OIE. The chickens inoculated with the virus via the intranasal route, however, survived without showing any clinical signs. On the other hand, an avirulent H5N1 strain, A/duck/Hokkaido/Vac-1/2004 (Vac1 (H5N1, acquired intranasal pathogenicity after a pair of di-basic amino acid residues was introduced into the cleavage site of the HA, followed by two passages by air sac inoculation in chicks. Conclusion The present results demonstrate that an H9N2 virus has the potential to acquire intravenous pathogenicity in chickens although the morbidity via the nasal route of infection is lower than that of H5N1 HPAIV.

Determinación y localización del plano oclusal en la rehabilitación de pacientes adultos mayores usuarios de prótesis completas

OpenAIRE

Vera, Mónica Mabel

2015-01-01

La orientación del plano oclusal es importante en el tratamiento protético en desdentados, al perder los dientes naturales las referencias oclusales están ausentes. Objetivo: Determinar el plano de oclusión posterior más adecuado que favorezca la funcionalidad de la rehabilitación protésica y conservación del reborde residual en la prótesis total removible. Determinar el punto anatómico posterior que conformará el plano protético más paralelo al reborde residual. Metodolog...

Management of crop residues for sustainable crop production. Results of a co-ordinated research project 1996-2001

International Nuclear Information System (INIS)

2003-05-01

Since ancient times, farmers have recognized the importance of organic matter inputs to enhance crop yields. Organic matter contributes to plant growth through beneficial effects on the physical, chemical, and biological properties of the soil, including (i) provision of a carbon and energy source for soil microbes, (ii) improvement of soil aggregation, thus reducing the hazard of erosion, (iii) retaining of nutrients and water, (iv) provision of nutrients through decomposition, and (v) reduction of soil compaction. The amount of soil organic matter is controlled by the balance between additions of plant and animal materials and losses by decomposition. Both additions and losses are directly affected by management practices. This CRP supported national efforts in eleven Member States to identify options managing crop residues for sustainable agricultural production and environmental preservation in a wide range of soils and cropping systems. Various options for the recycling of crop residues that are sustainable and economically attractive to farmers were examined using isotopic techniques. The specific options of this CRP were: to increase the quantity of nutrients available to crops from organic sources and for more effective recycling of those nutrients; to enhance the efficiency of use of nutrients by crops, and minimize losses through improved synchrony between process-level understanding of carbon and nutrient flow through the use of isotopic techniques so that management recommendations can be extrapolated to a wide range of environments using models. A simple mathematical model, descriptive in nature, was developed to synthesize information collected from all experimental sites, allowing comparisons between treatments and sites. Most of the fertilizer N was lost during the first cropping season and only insignificant losses occurred in the following seasons. The losses of N from applied fertilizer ranged from 45 to 85% irrespective of crop-residue

Characterization of Pseudomonas aeruginosa chitinase, a gradually secreted protein.

Science.gov (United States)

Folders, J; Algra, J; Roelofs, M S; van Loon, L C; Tommassen, J; Bitter, W

2001-12-01

The gram-negative bacterium Pseudomonas aeruginosa secretes many proteins into its extracellular environment via the type I, II, and III secretion systems. In this study, a gene, chiC, coding for an extracellular chitinolytic enzyme, was identified. The chiC gene encodes a polypeptide of 483 amino acid residues, without a typical N-terminal signal sequence. Nevertheless, an N-terminal segment of 11 residues was found to be cleaved off in the secreted protein. The protein shows sequence similarity to the secreted chitinases ChiC of Serratia marcescens, ChiA of Vibrio harveyi, and ChiD of Bacillus circulans and consists of an activity domain and a chitin-binding domain, which are separated by a fibronectin type III domain. ChiC was able to bind and degrade colloidal chitin and was active on the artificial substrates carboxymethyl-chitin-Remazol Brilliant Violet and p-nitrophenyl-beta-D-N,N',N"-triacetylchitotriose, but not on p-nitrophenyl-beta-D-N-acetylglucosamine, indicating that it is an endochitinase. Expression of the chiC gene appears to be regulated by the quorum-sensing system of P. aeruginosa, since this gene was not expressed in a lasIR vsmI mutant. After overnight growth, the majority of the ChiC produced was found intracellularly, whereas only small amounts were detected in the culture medium. However, after several days, the cellular pool of ChiC was largely depleted, and the protein was found in the culture medium. This release could not be ascribed to cell lysis. Since ChiC did not appear to be secreted via any of the known secretion systems, a novel secretion pathway seems to be involved.

Sugar-binding sites of the HA1 subcomponent of Clostridium botulinum type C progenitor toxin.

Science.gov (United States)

Nakamura, Toshio; Tonozuka, Takashi; Ide, Azusa; Yuzawa, Takayuki; Oguma, Keiji; Nishikawa, Atsushi

2008-02-22

Clostridium botulinum type C 16S progenitor toxin contains a hemagglutinin (HA) subcomponent, designated HA1, which appears to play an important role in the effective internalization of the toxin in gastrointestinal epithelial cells and in creating a broad specificity for the oligosaccharide structure that corresponds to various targets. In this study, using the recombinant protein fused to glutathione S-transferase, we investigated the binding specificity of the HA1 subcomponent to sugars and estimated the binding sites of HA1 based on X-ray crystallography and soaking experiments using various sugars. N-Acetylneuraminic acid, N-acetylgalactosamine, and galactose effectively inhibited the binding that occurs between glutathione S-transferase-HA1 and mucins, whereas N-acetylglucosamine and glucose did not inhibit it. The crystal structures of HA1 complex with N-acetylneuraminic acid, N-acetylgalactosamine, and galactose were also determined. There are two sugar-binding sites, sites I and II. Site I corresponds to the electron densities noted for all sugars and is located at the C-terminal beta-trefoil domain, while site II corresponds to the electron densities noted only for galactose. An aromatic amino acid residue, Trp176, at site I has a stacking interaction with the hexose ring of the sugars. On the other hand, there is no aromatic residue at site II; thus, the interaction with galactose seems to be poor. The double mutant W176A at site I and D271F at site II has no avidity for N-acetylneuraminic acid but has avidity for galactose. In this report, the binding specificity of botulinum C16S toxin HA1 to various sugars is demonstrated based on its structural features.

X-ray residual stress measurement and its variation during plane bending fatigue and sliding wear processes in TiC, TiN, TiB2 and Al2O3 coated carbon steels

International Nuclear Information System (INIS)

Endoh, Takashi; Idemitsu, Kohji; Kawakami, Mamoru

1993-01-01

The development of ceramic coating to metals was stimulated by the need for high temperature, wear and corrosion resistant materials. Recently TiC, TiN, TiB 2 and Al 2 O 3 are used as ceramic coating materials. In the present study, the X-ray method was successfully applied to measure the residual stress distribution in their ceramics coated steels. The X-ray elastic constants were determined and compared with the mechanically measured values. And plane bending and sliding wear tests were carried out. The X-ray method was successfully applied to measure the residual stress changes during fatigue and wear processes. The relationship between the change of residual stress and damage accumulation was investigated. (author)

DEFORMACIÓN ELÁSTICA RESIDUAL EN LÁMINAS DE ACERO AISI 304 RECUBIERTAS CON UNA PELÍCULA DE NITRURO DE TITANIO DEPOSITADA POR PVD-MAGNETRON SPUTTERING

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H. A. COLORADO

2009-01-01

Full Text Available Se realizó una caracterización mediante difracción de rayos x (DRX en láminas de acero inoxidable AISI 304 recubierto con una capa de nitruro de titanio de 3 um de espesor, obtenida mediante deposición física de vapor (PVD-MAGNETRON SPUTTERING a una temperatura de 200 °C. se tomaron imágenes de microscopía electrónica de barrido (MEB, microscopía óptica (MO y microscopía de fuerza atómica (MFA para caracterizar el sustrato, la capa y la zona cercana a la intercara. adicionalmente se determinó la deformación elástica residual asociada con el ensanchamiento de los picos de DRX.

LC-MS n Analysis of Isomeric Chondroitin Sulfate Oligosaccharides Using a Chemical Derivatization Strategy

Science.gov (United States)

Huang, Rongrong; Pomin, Vitor H.; Sharp, Joshua S.

2011-09-01

Improved methods for structural analyses of glycosaminoglycans (GAGs) are required to understand their functional roles in various biological processes. Major challenges in structural characterization of complex GAG oligosaccharides using liquid chromatography-mass spectrometry (LC-MS) include the accurate determination of the patterns of sulfation due to gas-phase losses of the sulfate groups upon collisional activation and inefficient on-line separation of positional sulfation isomers prior to MS/MS analyses. Here, a sequential chemical derivatization procedure including permethylation, desulfation, and acetylation was demonstrated to enable both on-line LC separation of isomeric mixtures of chondroitin sulfate (CS) oligosaccharides and accurate determination of sites of sulfation by MS n . The derivatized oligosaccharides have sulfate groups replaced with acetyl groups, which are sufficiently stable to survive MS n fragmentation and reflect the original sulfation patterns. A standard reversed-phase LC-MS system with a capillary C18 column was used for separation, and MS n experiments using collision-induced dissociation (CID) were performed. Our results indicate that the combination of this derivatization strategy and MS n methodology enables accurate identification of the sulfation isomers of CS hexasaccharides with either saturated or unsaturated nonreducing ends. Moreover, derivatized CS hexasaccharide isomer mixtures become separable by LC-MS method due to different positions of acetyl modifications.

Residual gas analysis

International Nuclear Information System (INIS)

Berecz, I.

1982-01-01

Determination of the residual gas composition in vacuum systems by a special mass spectrometric method was presented. The quadrupole mass spectrometer (QMS) and its application in thin film technology was discussed. Results, partial pressure versus time curves as well as the line spectra of the residual gases in case of the vaporization of a Ti-Pd-Au alloy were demonstrated together with the possible construction schemes of QMS residual gas analysers. (Sz.J.)

Study of mortars with industrial residual plastic scales