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Sample records for non-photosynthetic sulphide-oxidizing bacteria

  1. A screening method for the isolation of polyhydroxyalkanoate-producing purple non-sulfur photosynthetic bacteria from natural seawater

    Directory of Open Access Journals (Sweden)

    Mieko Higuchi-Takeuchi

    2016-09-01

    Full Text Available Polyhydroxyalkanoates (PHAs are a family of biopolyesters accumulated by a variety of microorganisms as carbon and energy storage under starvation conditions. We focused on marine purple non-sulfur photosynthetic bacteria as host microorganisms for PHA production and developed a method for their isolation from natural seawater. To identify novel PHA-producing marine purple non-sulfur photosynthetic bacteria, natural seawaters were cultured in nutrient-rich medium for purple non-sulfur photosynthetic bacteria, and twelve pink- or red-pigmented colonies were picked up. Gas chromatography mass spectrometry analysis revealed that four isolates synthesized PHA at levels ranging from 0.5 to 24.4 wt% of cell dry weight. The 16S ribosomal RNA sequence analysis revealed that one isolate (HM2 showed 100% identity to marine purple non-sulfur photosynthetic bacteria. In conclusion, we have demonstrated in this study that PHA-producing marine purple non-sulfur photosynthetic bacteria can be isolated from natural seawater under nutrient-rich conditions.

  2. Statistical optimization of gold recovery from difficult leachable sulphide minerals using bacteria

    Energy Technology Data Exchange (ETDEWEB)

    Ahmed, Hussin A.M. [King Abdulaziz Univ., Jeddah (Saudi Arabia). Mining Engineering Dept.; El-Midany, Ayman A. [King Saud Univ., Riyadh (Saudi Arabia)

    2012-07-01

    Some of refractory gold ores represent one of the difficult processable ores due to fine dissemination and interlocking of the gold grains with the associated sulphide minerals. This makes it impossible to recover precious metals from sulphide matrices by direct cyanide leaching even at high consumption of cyanide solution. Research to solve this problem is numerous. Application of bacteria shows that, some types of bacteria have great affect on sulphides bio-oxidation and consequently facilitate the leaching process. In this paper, leaching of Saudi gold ore, from Alhura area, containing sulphides before cyanidation is studied to recover gold from such ores applying bacteria. The process is investigated using stirred reactor bio-leaching rather than heap bio-leaching. Using statistical analysis the main affecting variables under studied conditions were identified. The design results indicated that the dose of bacteria, retention time and nutrition K{sub 2}SO{sub 4} are the most significant parameters. The higher the bacterial dose and the bacterial nutrition, the better is the concentrate grade. Results show that the method is technically effective in gold recovery. A gold concentrate containing > 100 g/t gold was obtained at optimum conditions, from an ore containing < 2 g/t gold i.e., 10 ml bacterial dose, 6 days retention time, and 6.5 kg/t K{sub 2}SO{sub 4}as bacteria nutrition. (orig.)

  3. Proton non-Rutherford backscattering study of oxidation kinetics in Cu and Fe sulphides

    International Nuclear Information System (INIS)

    Chiari, M.; Giuntini, L.; Pratesi, G.; Santo, A.P.

    1998-01-01

    Non-Rutherford backscattering spectrometry (NBS) with 2.4 MeV protons was performed for depth profiling of oxygen in three species of copper and iron sulphides - pyrite, chalcopyrite and bornite - on both altered and fresh surfaces. The tarnished surfaces were obtained by bathing samples in H 2 O 2 (35% vol.) for 100 and 1000 s. The spectra collected were compared to simulations to extract quantitative data on oxygen depth distributions for the different bathing times. The measurements have shown that the kinetics of oxidation has completely different patterns in the three investigated minerals. (orig.)

  4. Excitons in intact cells of photosynthetic bacteria.

    Science.gov (United States)

    Freiberg, Arvi; Pajusalu, Mihkel; Rätsep, Margus

    2013-09-26

    Live cells and regular crystals seem fundamentally incompatible. Still, effects characteristic to ideal crystals, such as coherent sharing of excitation, have been recently used in many studies to explain the behavior of several photosynthetic complexes, especially the inner workings of the light-harvesting apparatus of the oldest known photosynthetic organisms, the purple bacteria. To this date, there has been no concrete evidence that the same effects are instrumental in real living cells, leaving a possibility that this is an artifact of unnatural study conditions, not a real effect relevant to the biological operation of bacteria. Hereby, we demonstrate survival of collective coherent excitations (excitons) in intact cells of photosynthetic purple bacteria. This is done by using excitation anisotropy spectroscopy for tracking the temperature-dependent evolution of exciton bands in light-harvesting systems of increasing structural complexity. The temperature was gradually raised from 4.5 K to ambient temperature, and the complexity of the systems ranged from detergent-isolated complexes to complete bacterial cells. The results provide conclusive evidence that excitons are indeed one of the key elements contributing to the energetic and dynamic properties of photosynthetic organisms.

  5. Extremophiles in Mineral Sulphide Heaps: Some Bacterial Responses to Variable Temperature, Acidity and Solution Composition

    Directory of Open Access Journals (Sweden)

    Helen R. Watling

    2015-07-01

    Full Text Available In heap bioleaching, acidophilic extremophiles contribute to enhanced metal extraction from mineral sulphides through the oxidation of Fe(II and/or reduced inorganic sulphur compounds (RISC, such as elemental sulphur or mineral sulphides, or the degradation of organic compounds derived from the ore, biota or reagents used during mineral processing. The impacts of variable solution acidity and composition, as well as temperature on the three microbiological functions have been examined for up to four bacterial species found in mineral sulphide heaps. The results indicate that bacteria adapt to sufficiently high metal concentrations (Cu, Ni, Co, Zn, As to allow them to function in mineral sulphide heaps and, by engaging alternative metabolic pathways, to extend the solution pH range over which growth is sustained. Fluctuating temperatures during start up in sulphide heaps pose the greatest threat to efficient bacterial colonisation. The large masses of ores in bioleaching heaps mean that high temperatures arising from sulphide oxidation are hard to control initially, when the sulphide content of the ore is greatest. During that period, mesophilic and moderately thermophilic bacteria are markedly reduced in both numbers and activity.

  6. Biotechnological sulphide removal with oxygen

    NARCIS (Netherlands)

    Buisman, C.

    1989-01-01

    This thesis deals with the development of a new process for biotechnological sulphide removal from wastewater, in which it is attempted to convert sulphide into elemental sulphur by colourless sulphur bacteria. The toxicity, corrosive properties, unpleasant odor and high oxygen demand of sulphide

  7. Effect of Copper and Iron Ions on the Sulphidizing Flotation of Copper Oxide in Copper Smelting Slag

    OpenAIRE

    Qing-qing Pan; Hui-qing Peng

    2018-01-01

    The treatment of smelting slag has attracted much attention nowadays. This study investigates the influence of Na2S, CuSO4, and FeCl3 on sulphidizing flotation of copper oxide. The results show that a proper Cu2+ concentration can increase the sulphidizing effect of copper oxide, while Fe3+ inhibits the sulphidizing effect. Further analysis shows that Cu2+ ions can reduce the surface potential, increase the S2− adsorption, then generate more polysulfide, and therefore promote the sulphidizing...

  8. Seeing green bacteria in a new light: genomics-enabled studies of the photosynthetic apparatus in green sulfur bacteria and filamentous anoxygenic phototrophic bacteria

    DEFF Research Database (Denmark)

    Frigaard, Niels-Ulrik; Bryant, Donald A

    2004-01-01

    Based upon their photosynthetic nature and the presence of a unique light-harvesting antenna structure, the chlorosome, the photosynthetic green bacteria are defined as a distinctive group in the Bacteria. However, members of the two taxa that comprise this group, the green sulfur bacteria...... (Chlorobi) and the filamentous anoxygenic phototrophic bacteria ("Chloroflexales"), are otherwise quite different, both physiologically and phylogenetically. This review summarizes how genome sequence information facilitated studies of the biosynthesis and function of the photosynthetic apparatus...... a and carotenoid biosynthesis enzymes, gene cluster analysis in Cfx. aurantiacus, and gene inactivation studies in Chl. tepidum. Based on these results, BChl a and BChl c biosynthesis is similar in the two organisms, whereas carotenoid biosynthesis differs significantly. In agreement with its facultative anaerobic...

  9. The properties of protective oxide scales containing cerium on alloy 800H in oxidizing and oxidizing/sulphidizing environments

    NARCIS (Netherlands)

    Haanappel, V.A.C.; Haanappel, V.A.C.; Fransen, T.; Geerdink, Bert; Gellings, P.J.; Stroosnijder, M.F.

    1991-01-01

    The corrosion protection of oxide scales formed by electrophoretic deposition in a cerium-containing sol on Alloy 800H, a 32Ni-20Cr steel, followed by firing in air at 1123 K was studied in oxidizing and mixed oxidizing/sulphidizing environments at elevated temperatures. In particular, the influence

  10. Effect of Copper and Iron Ions on the Sulphidizing Flotation of Copper Oxide in Copper Smelting Slag

    Directory of Open Access Journals (Sweden)

    Qing-qing Pan

    2018-01-01

    Full Text Available The treatment of smelting slag has attracted much attention nowadays. This study investigates the influence of Na2S, CuSO4, and FeCl3 on sulphidizing flotation of copper oxide. The results show that a proper Cu2+ concentration can increase the sulphidizing effect of copper oxide, while Fe3+ inhibits the sulphidizing effect. Further analysis shows that Cu2+ ions can reduce the surface potential, increase the S2− adsorption, then generate more polysulfide, and therefore promote the sulphidizing flotation. However, Fe3+ ions would increase the surface potential, reduce the S2− adsorption, generate more sulfur element, and therefore inhibit the sulphidizing flotation.

  11. A double Fe-Ti oxide and Fe-sulphide liquid immiscibility in the Itsindro Gabbro Complex, Madagascar

    Science.gov (United States)

    Augé, Thierry; Bailly, Laurent; Roig, Jean-Yves

    2017-11-01

    The petrology and mineralogy of the Itsindro complex in south-central Madagascar has been investigated through samples obtained from the 320.7 m-deep Lanjanina borehole. The section consists of a 254 m-thick pyroxenite unit with interbedded gabbro layers that overlies a gabbro unit and is itself overlain by a 19 m-thick granite unit. Most of the structures are sub-horizontal. A weak magmatic layering is locally observed but at the scale of the core, the intrusion does not appear to be a layered complex. Pyroxenite and gabbro show a systematic disseminated mineralization consisting of Fe-Ti-P oxides and Fe-(Cu-Ni) sulphides that takes the form of ilmenite-titanomagnetite ± apatite and pyrrhotite ± chalcopyrite ± pentlandite. In the upper zone, from 90 to 72 m, sub-massive centimetre-to decimetre-sized layers of oxides and sulphides comprise a total of 16 m of sub-massive sulphide (the main mineralized zone). In this mineralized zone the oxide/sulphide ratio is close to 1/1. The sulphide is strongly dominated by pyrrhotite, which may locally contain inclusions of molybdenite crystals with the Re sulphide rheniite (ReS2). Oxides are generally euhedral, included in or attached to the Fe-sulphide, and also locally form sub-massive centimetre-sized bands. Apatite as a cumulus phase is ubiquitous. Locally it may account for 30% of the ore-rich samples and some samples consist of apatite-Fe-Ti oxides-Fe-Cu-Ni sulphides with virtually no silicate. Apatite is the main REE carrier but the total REE content remains low (<90 ppm). Mineral compositions and whole rock geochemistry indicate that the rocks are highly differentiated, and in spite of a relatively limited thickness, the differentiation process is observed. Two zones can be distinguished: from the bottom to 162.8 m we see a decrease in the Mg number of olivine and pyroxene, and a drop in TiO2 and Al2O3 for the latter. A reverse trend is then observed within the pyroxenite unit from the 162.8 m level upwards. The

  12. Simultaneous photocatalytic and microbial degradation of dye-containing wastewater by a novel g-C3N4-P25/photosynthetic bacteria composite.

    Directory of Open Access Journals (Sweden)

    Xinying Zhang

    Full Text Available Azo dyes are very resistant to light-induced fading and biodegradation. Existing advanced oxidative pre-treatment methods based on the generation of non-selective radicals cannot efficiently remove these dyes from wastewater streams, and post-treatment oxidative dye removal is problematic because it may leave many byproducts with unknown toxicity profiles in the outgoing water, or cause expensive complete mineralization. These problems could potentially be overcome by combining photocatalysis and biodegradation. A novel visible-light-responsive hybrid dye removal agent featuring both photocatalysts (g-C3N4-P25 and photosynthetic bacteria encapsulated in calcium alginate beads was prepared by self-assembly. This system achieved a removal efficiency of 94% for the dye reactive brilliant red X-3b and also reduced the COD of synthetic wastewater samples by 84.7%, successfully decolorized synthetic dye-contaminated wastewater and reduced its COD, demonstrating the advantages of combining photocatalysis and biocatalysis for wastewater purification. The composite apparently degrades X-3b by initially converting the dye into aniline and phenol derivatives whose aryl moieties are then attacked by free radicals to form alkyl derivatives, preventing the accumulation of aromatic hydrocarbons that might suppress microbial activity. These alkyl intermediates are finally degraded by the photosynthetic bacteria.

  13. Sulphur oxidising bacteria in mangrove ecosystem: A review ...

    African Journals Online (AJOL)

    Sulphur-oxidizing bacteria such as photoautotrophs, chemolithotrophs and heterotrophs play an important role in the mangrove environment for the oxidation of the toxic sulphide produced by sulphur reducing bacteria and act as a key driving force behind all sulphur transformations in the mangrove ecosystem which is ...

  14. An evolutionary perspective on the immunomodulatory role of hydrogen sulphide.

    Science.gov (United States)

    Rivers-Auty, J

    2015-11-01

    Most preclinical studies on endogenous hydrogen sulphide signalling have given little consideration to the fact that the human body contains more bacterial cells than human cells, and that evolution provides the context for all biology. Whether hydrogen sulphide is pro or anti-inflammatory is heavily debated within the literature, yet researchers have not fully considered that invasive bacteria produce hydrogen sulphide, often at levels far above the endogenous levels of the host. Here I argue that if hydrogen sulphide is an endogenous signalling molecule with immunomodulatory functions, then it must have evolved in the presence of virulent bacteria which produce hydrogen sulphide. This context leads to two competing theories about the evolution of endogenous hydrogen sulphide signalling. The detectable emission theory proposes that bacteria produce hydrogen sulphide as part of normal metabolism and hosts which evolved to detect and respond to this hydrogen sulphide would gain a selective survival advantage. This predicts that the endogenous production of hydrogen sulphide is a mechanism which amplifies the bacterial hydrogen sulphide signal. The opposing protective agent theory predicts that bacterial hydrogen sulphide is an effective defence against the bactericidal mechanisms of the host's immune response. In this case, endogenous hydrogen sulphide production is either at inconsequential levels to alter the immune response, or is involved in the inflammation resolution process. Evidence suggests that the direct interactions of hydrogen sulphide with the bactericidal mechanisms of the innate immune system are most congruent with the protective agent theory. Therefore, I argue that if hydrogen sulphide is an immunomodulatory endogenous signalling molecule its effects are most likely anti-inflammatory. Copyright © 2015 Elsevier Ltd. All rights reserved.

  15. Isotope effects associated with the anaerobic oxidation of sulfide by the purple photosynthetic bacterium, Chromatium vinosum

    International Nuclear Information System (INIS)

    Fry, B.; Gest, H.; Hayes, J.M.

    1984-01-01

    Small inverse isotope effects of 1-3 per thousand were consistently observed for the oxidation of sulfide to elemental sulfur during anaerobic photometabolism by Chromatium vinosum. The inverse fractionation can be accounted for by an equilibrium isotope effect between H 2 S and HS - , and may indicate that C. vinosum (and other photosynthetic bacteria) utilizes H 2 S rather than HS - as the substrate during sulfide oxidation. (Auth.)

  16. Kinetics and mechanism of the oxidation of organic sulphides by 2,2 ...

    Indian Academy of Sciences (India)

    Unknown

    In the present article, we report the kinetics of oxidation of thirty-four organic sulphides by BPCC in ..... t-Butyl alcohol. 24⋅0. Acetone. 40⋅7 .... different sensitivity to the electronic demand for the phenomenon being studied. It has the ... 144. Table 5. Temperature dependence for the reaction constants for the oxidation of.

  17. Iron sulphide containing hydrodesulfurization catalysts : Mössbauer study of the sulfidibility of alpha-iron(III) oxide

    NARCIS (Netherlands)

    Ramselaar, W.L.T.M.; Beer, de V.H.J.; Kraan, van der A.M.

    1988-01-01

    As a first step in the study of the sulphidation of carbon-supported iron oxide catalyst systems the sulphiding of a well-characterized, unsupported model compound, viz. a-Fe2O3(mean particle diameter ca. 50 nm) was investigated using in-situ Mössbauer spectroscopy and the temperature-programmed

  18. Investigation of the non-photochemical processes in photosynthetic bacteria and higher plants using interference of coherent radiation - a new approach

    Czech Academy of Sciences Publication Activity Database

    Roháček, Karel; Kloz, M.; Bína, David; Batysta, F.; Vácha, František

    2007-01-01

    Roč. 91, 2-3 (2007), s. 301 ISSN 0166-8595. [International Congress of Photosynthesis/14./. 22.07.2007-27.07.2007, Glasgow] Institutional research plan: CEZ:AV0Z50510513 Keywords : photosynthetic bacteria Subject RIV: CE - Biochemistry

  19. Mesophilic leaching of copper sulphide sludge

    Directory of Open Access Journals (Sweden)

    VLADIMIR B. CVETKOVSKI

    2009-02-01

    Full Text Available Copper was precipitated using a sodium sulphide solution as the precipitation agent from an acid solution containing 17 g/l copper and 350 g/l sulphuric acid. The particle size of nearly 1 µm in the sulphide sludge sample was detected by optical microscopy. Based on chemical and X-ray diffraction analyses, covellite was detected as the major sulphide mineral. The batch bioleach amenability test was performed at 32 °C on the Tk31 mine mesophilic mixed culture using a residence time of 28 days. The dissolution of copper sulphide by direct catalytic leaching of the sulphides with bacteria attached to the particles was found to be worthy, although a small quantity of ferrous ions had to be added to raise the activity of the bacteria and the redox potential of the culture medium. Throughout the 22-day period of the bioleach test, copper recovery based on residue analysis indicated a copper extraction of 95 %, with copper concentration in the bioleach solution of 15 g/l. The slope of the straight line tangential to the exponential part of the extraction curve gave a copper solubilisation rate of 1.1 g/l per day. This suggests that a copper extraction of 95 % for the period of bioleach test of 13.6 days may be attained in a three-stage bioreactor system.

  20. Continuous Cultivation of Photosynthetic Bacteria for Fatty Acids Production

    DEFF Research Database (Denmark)

    Kim, Dong-Hoon; Lee, Ji-Hye; Hwang, Yuhoon

    2013-01-01

    In the present work, we introduced a novel approach for microbial fatty acids (FA) production. Photosynthetic bacteria, Rhodobacter sphaeroides KD131, were cultivated in a continuous-flow, stirred-tank reactor (CFSTR) at various substrate (lactate) concentrations.At hydraulic retention time (HRT)....... sphaeroides was around 35% of dry cell weight, mainly composed of vaccenic acid (C18:1, omega-7)....

  1. Application of Cavity Enhanced Absorption Spectroscopy to the Detection of Nitric Oxide, Carbonyl Sulphide, and Ethane--Breath Biomarkers of Serious Diseases.

    Science.gov (United States)

    Wojtas, Jacek

    2015-06-17

    The paper presents one of the laser absorption spectroscopy techniques as an effective tool for sensitive analysis of trace gas species in human breath. Characterization of nitric oxide, carbonyl sulphide and ethane, and the selection of their absorption lines are described. Experiments with some biomarkers showed that detection of pathogenic changes at the molecular level is possible using this technique. Thanks to cavity enhanced spectroscopy application, detection limits at the ppb-level and short measurements time (laser and a tunable laser system consisting of an optical parametric oscillator and difference frequency generator. Setup using the first source provided a detection limit of 30 ppb for nitric oxide and 250 ppb for carbonyl sulphide. During experiments employing a second laser, detection limits of 0.9 ppb and 0.3 ppb were obtained for carbonyl sulphide and ethane, respectively. The conducted experiments show that this type of diagnosis would significantly increase chances for effective therapy of some diseases. Additionally, it offers non-invasive and real time measurements, high sensitivity and selectivity as well as minimizing discomfort for patients. For that reason, such sensors can be used in screening for early detection of serious diseases.

  2. Significance of porous structure on degradatin of 2 2' dichloro diethyl sulphide and 2 chloroethyl ethyl sulphide on the surface of vanadium oxide nanostructure

    International Nuclear Information System (INIS)

    Singh, Beer; Mahato, T.H.; Srivastava, A.K.; Prasad, G.K.; Ganesan, K.; Vijayaraghavan, R.; Jain, Rajeev

    2011-01-01

    Degradation of the king of chemical warfare agent, 2 2' dichloro diethyl sulphide (HD), and its simulant 2 chloroethyl ethyl sulphide (CEES) were investigated on the surface of porous vanadium oxide nanotubes at room temperature (30 ± 2 ° C ). Reaction kinetics was monitored by GC-FID technique and the reaction products were characterized by GC-MS. Data indicates that HD degraded faster relative to CEES inside the solid decontaminant compared to the reported liquid phase degradation of CEES and HD. Data explores the role of hydrolysis, elimination and oxidation reactions in the detoxification of HD and CEES and the first order rate constant and t 1/2 were calculated to be 0.026 h -1 , 26.6 h for CEES and 0.052 h -1 , 13.24 h for HD. In this report faster degradation of HD compared to CEES was explained on the basis of porous structure.

  3. In-situ XRD and EDS method study on the oxidation behaviour of Ni-Cu sulphide ore.

    Science.gov (United States)

    Li, Guangshi; Cheng, Hongwei; Xiong, Xiaolu; Lu, Xionggang; Xu, Cong; Lu, Changyuan; Zou, Xingli; Xu, Qian

    2017-06-12

    The oxidation mechanism of sulfides is the key issue during the sulphide-metallurgy process. In this study, the phase transformation and element migration were clearly demonstrated by in-situ laboratory-based X-ray diffraction (XRD) and energy-dispersive X-ray spectroscopy (EDS), respectively. The reaction sequence and a four-step oxidation mechanism were proposed and identified. The elemental distribution demonstrated that at a low temperature, the Fe atoms diffused outward and the Ni/Cu atoms migrated toward the inner core, whereas the opposite diffusion processes were observed at a higher temperature. Importantly, the unique visual presentation of the oxidation behaviour provided by the combination of in-situ XRD and EDS might be useful for optimising the process parameters to improve the Ni/Cu extraction efficiency during Ni-Cu sulphide metallurgy.

  4. Growth of cadmium oxide whiskers on cadmium sulphide single crystals with copper as growth activator

    Energy Technology Data Exchange (ETDEWEB)

    Koparanova, N.; Simov, S. (Bylgarska Akademiya na Naukite, Sofia. Inst. po Fizika na Tvyrdoto Tyalo); Genchev, D. (Bylgarska Akademiya na Naukite, Sofia. Inst. za Yadrena Izsledvaniya i Yadrena Energetika); Metchenov, G. (Research Inst. of Criminalistics and Criminology, Sofia (Bulgaria))

    1985-02-01

    Some results on the growth and morphology of cadmium oxide whiskers, obtained on cadmium sulphide single crystals with copper as a growth activator, are presented in this work. Cadmium oxide whiskers have been obtained on brace 112-bar0 brace faces of cadmium sulphide plates with a copper layer deposited in advance. The whiskers grew during the annealing of the plates in a weak stream of technically pure argon at temperatures 670 to 730 deg C for 15 min to 3.5 h. Details about the procedure have been given elsewhere. The composition and morphology of the whiskers have been studied by an X-ray microanalyser JEOL 35 DDS and a scanning electron microscope JEOL, JSM 35. The optical microscopic observations have shown that after annealing, a gray-black granular layer is formed on the cadmium sulphide single crystals and this layer can easily be separated from the crystal substrate. Under the granular layer the crystal is heavily damaged. The whiskers grow on the granular layer and they are coloured yellow-brown or red-brown. The maximum whisker length attains several hundreds of micrometres and in some cases up to 1 mm or more.

  5. Growth of cadmium oxide whiskers on cadmium sulphide single crystals with copper as growth activator

    International Nuclear Information System (INIS)

    Koparanova, N.; Simov, S.

    1985-01-01

    Some results on the growth and morphology of cadmium oxide whiskers, obtained on cadmium sulphide single crystals with copper as a growth activator, are presented in this work. Cadmium oxide whiskers have been obtained on brace 112-bar0 brace faces of cadmium sulphide plates with a copper layer deposited in advance. The whiskers grew during the annealing of the plates in a weak stream of technically pure argon at temperatures 670 to 730 deg C for 15 min to 3.5 h. Details about the procedure have been given elsewhere. The composition and morphology of the whiskers have been studied by an X-ray microanalyser JEOL 35 DDS and a scanning electron microscope JEOL, JSM 35. The optical microscopic observations have shown that after annealing, a gray-black granular layer is formed on the cadmium sulphide single crystals and this layer can easily be separated from the crystal substrate. Under the granular layer the crystal is heavily damaged. The whiskers grow on the granular layer and they are coloured yellow-brown or red-brown. The maximum whisker length attains several hundreds of micrometres and in some cases up to 1 mm or more. (author)

  6. Biotic conversion of sulphate to sulphide and abiotic conversion of sulphide to sulphur in a microbial fuel cell using cobalt oxide octahedrons as cathode catalyst.

    Science.gov (United States)

    Chatterjee, Pritha; Ghangrekar, M M; Rao, Surampalli; Kumar, Senthil

    2017-05-01

    Varying chemical oxygen demand (COD) and sulphate concentrations in substrate were used to determine reaction kinetics and mass balance of organic matter and sulphate transformation in a microbial fuel cell (MFC). MFC with anodic chamber volume of 1 L, fed with wastewater having COD of 500 mg/L and sulphate of 200 mg/L, could harvest power of 54.4 mW/m 2 , at a Coulombic efficiency of 14%, with respective COD and sulphate removals of 90 and 95%. Sulphide concentration, even up to 1500 mg/L, did not inhibit anodic biochemical reactions, due to instantaneous abiotic oxidation to sulphur, at high inlet sulphate. Experiments on abiotic oxidation of sulphide to sulphur revealed maximum oxidation taking place at an anodic potential of -200 mV. More than 99% sulphate removal could be achieved in a MFC with inlet COD/sulphate of 0.75, giving around 1.33 kg/m 3  day COD removal. Bioelectrochemical conversion of sulphate facilitating sulphur recovery in a MFC makes it an interesting pollution abatement technique.

  7. Development of the floating sulphur biofilm reactor for sulphide ...

    African Journals Online (AJOL)

    Development of the floating sulphur biofilm reactor for sulphide oxidation in biological water treatment systems. ... The effect of influent sulphide concentrations, flow rate and reactor dimensions on the sulphur biofilm formation were investigated for the optimisation of elemental sulphur recovery and sulphide removal ...

  8. Metabolic Engineering and Modeling of Metabolic Pathways to Improve Hydrogen Production by Photosynthetic Bacteria

    Energy Technology Data Exchange (ETDEWEB)

    Jiao, Y. [Lawrence Livermore National Lab. (LLNL), Livermore, CA (United States); Navid, A. [Lawrence Livermore National Lab. (LLNL), Livermore, CA (United States)

    2014-12-19

    Rising energy demands and the imperative to reduce carbon dioxide (CO2) emissions are driving research on biofuels development. Hydrogen gas (H2) is one of the most promising biofuels and is seen as a future energy carrier by virtue of the fact that 1) it is renewable, 2) does not evolve the “greenhouse gas” CO2 in combustion, 3) liberates large amounts of energy per unit weight in combustion (having about 3 times the energy content of gasoline), and 4) is easily converted to electricity by fuel cells. Among the various bioenergy strategies, environmental groups and others say that the concept of the direct manufacture of alternative fuels, such as H2, by photosynthetic organisms is the only biofuel alternative without significant negative criticism [1]. Biological H2 production by photosynthetic microorganisms requires the use of a simple solar reactor such as a transparent closed box, with low energy requirements, and is considered as an attractive system to develop as a biocatalyst for H2 production [2]. Various purple bacteria including Rhodopseudomonas palustris, can utilize organic substrates as electron donors to produce H2 at the expense of solar energy. Because of the elimination of energy cost used for H2O oxidation and the prevention of the production of O2 that inhibits the H2-producing enzymes, the efficiency of light energy conversion to H2 by anoxygenic photosynthetic bacteria is in principle much higher than that by green algae or cyanobacteria, and is regarded as one of the most promising cultures for biological H2 production [3]. Here implemented a simple and relatively straightforward strategy for hydrogen production by photosynthetic microorganisms using sunlight, sulfur- or iron-based inorganic substrates, and CO2 as the feedstock. Carefully selected microorganisms with bioengineered beneficial

  9. Significance of porous structure on degradatin of 2 2' dichloro diethyl sulphide and 2 chloroethyl ethyl sulphide on the surface of vanadium oxide nanostructure

    Energy Technology Data Exchange (ETDEWEB)

    Singh, Beer, E-mail: beerbs5@rediffmail.com [Defence R and D Establishment, Jhansi Road, Gwalior, M.P 474002 (India); Mahato, T.H.; Srivastava, A.K.; Prasad, G.K.; Ganesan, K.; Vijayaraghavan, R. [Defence R and D Establishment, Jhansi Road, Gwalior, M.P 474002 (India); Jain, Rajeev [School of Studies in Chemistry, Jiwaji University, Gwalior, M.P. 474011 (India)

    2011-06-15

    Degradation of the king of chemical warfare agent, 2 2' dichloro diethyl sulphide (HD), and its simulant 2 chloroethyl ethyl sulphide (CEES) were investigated on the surface of porous vanadium oxide nanotubes at room temperature (30 {+-} 2{sup Degree-Sign }C ). Reaction kinetics was monitored by GC-FID technique and the reaction products were characterized by GC-MS. Data indicates that HD degraded faster relative to CEES inside the solid decontaminant compared to the reported liquid phase degradation of CEES and HD. Data explores the role of hydrolysis, elimination and oxidation reactions in the detoxification of HD and CEES and the first order rate constant and t{sub 1/2} were calculated to be 0.026 h{sup -1}, 26.6 h for CEES and 0.052 h{sup -1}, 13.24 h for HD. In this report faster degradation of HD compared to CEES was explained on the basis of porous structure.

  10. Reductive evolution of chloroplasts in non-photosynthetic plants, algae and protists.

    Science.gov (United States)

    Hadariová, Lucia; Vesteg, Matej; Hampl, Vladimír; Krajčovič, Juraj

    2018-04-01

    Chloroplasts are generally known as eukaryotic organelles whose main function is photosynthesis. They perform other functions, however, such as synthesizing isoprenoids, fatty acids, heme, iron sulphur clusters and other essential compounds. In non-photosynthetic lineages that possess plastids, the chloroplast genomes have been reduced and most (or all) photosynthetic genes have been lost. Consequently, non-photosynthetic plastids have also been reduced structurally. Some of these non-photosynthetic or "cryptic" plastids were overlooked or unrecognized for decades. The number of complete plastid genome sequences and/or transcriptomes from non-photosynthetic taxa possessing plastids is rapidly increasing, thus allowing prediction of the functions of non-photosynthetic plastids in various eukaryotic lineages. In some non-photosynthetic eukaryotes with photosynthetic ancestors, no traces of plastid genomes or of plastids have been found, suggesting that they have lost the genomes or plastids completely. This review summarizes current knowledge of non-photosynthetic plastids, their genomes, structures and potential functions in free-living and parasitic plants, algae and protists. We introduce a model for the order of plastid gene losses which combines models proposed earlier for land plants with the patterns of gene retention and loss observed in protists. The rare cases of plastid genome loss and complete plastid loss are also discussed.

  11. Long-Term Planning for Open Pits for Mining Sulphide-Oxide Ores in Order to Achieve Maximum Profit

    Science.gov (United States)

    Kržanović, Daniel; Conić, Vesna; Stevanović, Dejan; Kolonja, Božo; Vaduvesković, Jovan

    2017-12-01

    Profitable exploitation of mineralised material from the earth's crust is a complex and difficult task that depends on a comprehensive planning process. Answering the question of how to plan production depends on the geometry of the deposit, as well as the concentration, distribution, and type of minerals in it. The complex nature of mineral deposits largely determines the method of exploitation and profitability of mining operations. In addition to unit operating costs and metal prices, the optimal recovery of and achievement of maximum profit from deposits of sulphide-oxide ores also depend, to a significant extent, on the level of technological recovery achieved in the ore processing procedure. Therefore, in defining a long-term development strategy for open pits, special attention must be paid to the selection of an optimal procedure for ore processing in order to achieve the main objective: maximising the Net Present Value (NPV). The effect of using two different processes, flotation processing and hydrometallurgical methods (bioleaching acid leaching), on determining the ultimate pit is shown in the case of the Kraku Bugaresku-Cementacija sulphide-oxide ore deposit in eastern Serbia. Analysis shows that the application of hydrometallurgical methods of processing sulphide-oxide ore achieved an increase in NPV of 20.42%.

  12. Sulphide fluxes and concentrations in the spent nuclear fuel repository at Olkiluoto

    International Nuclear Information System (INIS)

    Wersin, P.; Alt-Epping, P.; Pitkaenen, P.

    2014-01-01

    Sulphide may act as corrodant for the copper canister in the KBS-3 disposal concept. Sulphide fluxes at repository level are affected by various sources in the host rock, the backfill and the buffer. Hydrogen sulphide is effectively immobilised by Fe to form insoluble iron sulphide minerals. Thus, dissolved sulphide levels in reducing environment and also in Olkiluoto groundwaters are generally low. In zones favourable for sulphate reducing bacteria (SRB), however, temporarily more elevated sulphide concentrations are possible. The sulphate reduction and subsequent iron sulphide precipitation process depends on geochemical conditions, microbial activity and mass transfer of the reactants and is thus highly system-specific. The overall objective of the work presented in this report is to provide a thorough background for the sulphide concentrations and sulphide fluxes in the near field and the far field used in the performance assessment 2012

  13. Biological sulphide removal from anaerobically treated domestic sewage: reactor performance and microbial community dynamics.

    Science.gov (United States)

    Garcia, Graziella Patrício Pereira; Diniz, Renata Côrtes Oliveira; Bicalho, Sarah Kinaip; Franco, Vitor Araujo de Souza; Gontijo, Eider Max de Oliveira; Toscano, Rodrigo Argolo; Canhestro, Kenia Oliveira; Santos, Merly Rita Dos; Carmo, Ana Luiza Rodrigues Dias; Lobato, Livia Cristina S; Brandt, Emanuel Manfred F; Chernicharo, Carlos A L; Calabria de Araujo, Juliana

    2015-01-01

    We developed a biological sulphide oxidation system and evaluated two reactors (shaped similar to the settler compartment of an up-flow anaerobic sludge blanket [UASB] reactor) with different support materials for biomass retention: polypropylene rings and polyurethane foam. The start-up reaction was achieved using microorganisms naturally occurring on the open surface of UASB reactors treating domestic wastewater. Sulphide removal efficiencies of 65% and 90% were achieved with hydraulic retention times (HRTs) of 24 and 12 h, respectively, in both reactors. However, a higher amount of elemental sulphur was formed and accumulated in the biomass from reactor 1 (20 mg S(0) g(-1) VTS) than in that from reactor 2 (2.9 mg S(0) g(-1) VTS) with an HRT of 24 h. Denaturing gradient gel electrophoresis (DGGE) results revealed that the the pink and green biomass that developed in both reactors comprised a diverse bacterial community and had sequences related to phototrophic green and purple-sulphur bacteria such as Chlorobium sp., Chloronema giganteum, and Chromatiaceae. DGGE band patterns also demonstrated that bacterial community was dynamic over time within the same reactor and that different support materials selected for distinct bacterial communities. Taken together, these results indicated that sulphide concentrations of 1-6 mg L(-1) could be efficiently removed from the effluent of a pilot-scale UASB reactor in two sulphide biological oxidation reactors at HRTs of 12 and 24 h, showing the potential for sulphur recovery from anaerobically treated domestic wastewater.

  14. Bacterial Oxidation and Reduction of Iron in the Processes of Creation and Treatment of Acid Mining Waters

    Directory of Open Access Journals (Sweden)

    Daniel Kupka

    2004-12-01

    Full Text Available Acid mine drainages (AMDs arise at the weathering of sulphidic minerals. The occurrence of acidic streams is commonly associated with the human mining activities. Due to the disruption and excavation of sulphide deposits, the oxidation processes have initiated. Acidic products of sulphide oxidation accelerate the degradation of accompanying minerals. AMDs typically contain high concentrations of sulfuric acid and soluble metals and cause serious ecological problems due to the water pollution and the devastation of adjacent country. Microbial life in these extremely acidic environments may be considerably diverse. AMDs are abundant in bacteria capable to oxidize and/or to reduce iron. The rate of bacterial oxidation of ferrous iron released from pyrite surfaces is up to one million times faster than the chemical oxidation rate at low pH. Bacterial regeneration of ferric iron maintains the continuity of pyrite oxidation and the production of AMDs. Another group of microorganisms living in these environments are acidophilic ferric iron reducing bacteria. This group of microorganisms has been discovered only relatively recently. Acidophilic heterotrophic bacteria reduce ferric iron in either soluble or solid forms to ferrous iron. The reductive dissolution of ferric iron minerals brings about a mobilization of iron as well as associated heavy metals. The Bacterial oxidation and reduction of iron play an important role in the transformation of either crystalline or amorphous iron-containing minerals, including sulphides, oxides, hydroxysulfates, carbonates and silicates. This work discusses the role of acidophilic bacteria in the natural iron cycling and the genesis of acidic effluents. The possibilities of application of iron bacteria in the remediation of AMDs are also considered.

  15. Method for removing hydrogen sulphide from oil-containing water and equipment therefore; Fremgangsmaate for aa fjerne hydrogensulfid fra oljeholdig vann

    Energy Technology Data Exchange (ETDEWEB)

    Hoeyvik, H; Hovland, J; Eskilt, J P

    1995-02-27

    The invention relates to an method for removing hydrogen sulphide (H{sub 2}S) from oil-containing water and equipment therefore. Oil-containing water and nitrate is conducted through a bioreactor to remove H{sub 2}S. Nitrate is added to the oil-containing water in a dose ratio (sulphide:nitrate) of 1:10 to 1:40. The retention time in the reactor tank is for 10-60 minutes. After this treatment, purified water, where >90% of the H{sub 2}S-amount is removed, is let out of the tank. The equipment for performing the above mentioned method, is based on a bioreactor having large density of denitrifying bacteria. The reactor tank, is filled with carrying material providing large contact area. Even distribution of oil-containing water and nitrate over the carrying material which already may be covered by septic mud, forms an active sulphide oxidizing biofilm having large surface. This biofilm makes an extremely effective equipment for removing sulphide from oil-containing water. 3 figs.

  16. Role of sulphide species on the behaviour of carbon steel envisioned for high-level radioactive disposal: interaction between sulphide and corrosion products

    International Nuclear Information System (INIS)

    Bourdoiseau, Jacques-Andre

    2011-01-01

    This PhD work deals with the nuclear waste disposal. In France, it is envisaged by Andra (French national radioactive waste management agency) that high-level radioactive wastes will be confined in a glass matrix, stored in a stainless steel canister, it self placed in a carbon steel overpack. The wastes will then be stored at a depth of ∼500 m in a deep geological repository, drilled in a very stiff (indurated) clay (argillite) formation. The kinetics of corrosion expected for the overpack in this disposal concept are low and will stay low if the somehow protective rust layer that will develop initially on the steel surface remains undamaged. Local changes of the physico-chemical conditions may however degrade this layer and induce accelerated kinetics of corrosion. In particular, the growth of sulphate reducing bacteria (SRB) close to the steel overpack cannot be excluded and the sulphide species these micro-organisms produce may modify the corrosion process. The aim of this work was then to achieve a better understanding of the corrosion system constituted with steel, its rust layer mainly made of siderite FeCO 3 , and a sulphide-containing electrolyte. First, it proved necessary to characterise the iron sulphides involved in the corrosion processes by Raman micro-spectroscopy so as to study their formation and transformation mechanisms in various conditions of Fe(II) and S(-II) concentration, pH, temperature and aeration. It could be demonstrated that the Raman spectrum of mackinawite FeS, the compound that precipitated in any case from dissolved Fe(II) and S(-II) species with the experimental conditions considered here, depended on the crystallinity and oxidation state. Moreover, the mechanisms of the oxidation of mackinawite into greigite Fe 3 S 4 in acidic anoxic solutions at 80 C could be described. Finally, iron sulphides, often present on archaeological artefacts, could be identified using Raman micro-spectroscopy. The compounds present were mainly

  17. Sulfur metabolism in phototrophic sulfur bacteria

    DEFF Research Database (Denmark)

    Frigaard, Niels-Ulrik; Dahl, Christiane

    2008-01-01

    Phototrophic sulfur bacteria are characterized by oxidizing various inorganic sulfur compounds for use as electron donors in carbon dioxide fixation during anoxygenic photosynthetic growth. These bacteria are divided into the purple sulfur bacteria (PSB) and the green sulfur bacteria (GSB......). They utilize various combinations of sulfide, elemental sulfur, and thiosulfate and sometimes also ferrous iron and hydrogen as electron donors. This review focuses on the dissimilatory and assimilatory metabolism of inorganic sulfur compounds in these bacteria and also briefly discusses these metabolisms...... in other types of anoxygenic phototrophic bacteria. The biochemistry and genetics of sulfur compound oxidation in PSB and GSB are described in detail. A variety of enzymes catalyzing sulfur oxidation reactions have been isolated from GSB and PSB (especially Allochromatium vinosum, a representative...

  18. Flow injection analysis of sulphide based on its photoelectrocatalytic oxidation at poly-methylene blue modified glassy carbon electrode

    International Nuclear Information System (INIS)

    Dilgin, Yusuf; Canarslan, Seda; Ayyildiz, Onder; Ertek, Bensu; Nişli, Gürel

    2012-01-01

    A new approach for photoelectrocatalytic determination of sulphide in a flow injection analysis (FIA) system was studied using a poly-methylene blue modified glassy carbon electrode (poly-MB/GCE). Results from electrochemical measurements have revealed that poly-MB/GCE is capable of signalling electrocatalytic and photoelectrocatalytic activity towards sulphide oxidation. When the surface of poly-MB/GCE was irradiated with a light source (250 W Halogen lamp), the electrocatalytic current increased substantially. A homemade flow electrochemical cell with a suitable transparent window for the irradiation of the electrode surface was used to perform the photoelectrocatalytic determination of sulphide in FIA system. The currents obtained from the photoamperometric measurements in the FIA system at optimum conditions (carrier solution: pH 9.0 Britton Robinson buffer solution containing 0.1 M KCl; flow rate: 1.3 mL min −1 ; transmission tubing length: 10 cm; injection volume: 100 μL; and constant applied potential: +150 mV vs. Ag/AgCl/KCl sat ) were linearly correlated with the sulphide concentration. The calibration curves were obtained for sulphide concentrations in a range of 0.5–500 μM. The detection limits were found to be 0.27 and 0.15 μM for amperometric and photoamperometric methods, respectively. The proposed method was successfully applied to different wastewaters such as municipal sewage or tannery wastewater. Finally, results from the sulphide measurements by poly-MB/GCE were in good agreement with those attained using spectrophotometric method.

  19. Carbon steel protection in G.S. [Girldler sulphide] plants: Pt. 8

    International Nuclear Information System (INIS)

    Lires, Osvaldo; Delfino, Cristina; Rojo, Enrique.

    1990-01-01

    In order to protect carbon steel of towers and piping of a GS experimental heavy water plant against corrosion produced by the action of aqueous solutions of hydrogen sulphide, a method, elsewhere published, was developed. Carbon steel exposed to saturated aqueous solutions of hydrogen sulphide forms iron sulphide scales. In oxygen free solutions, evolution of corrosion follows the sequence mackinawate → cubic ferrous sulphide → troilite → pyrrotite → pyrite. Scales formed by pyrrotite and pyrite are the most protective layers (these are obtained at 130 deg C, 2 MPa for a period of 14 days). Pyrite formation is favoured by an oxidizing agent presence that allows the oxidation of sulphur ions to disulphur ions. Elemental sulphur or oxygen were used as oxidating agents. Variation and operational parameters such as concentration, temperature, pH, aggregate time, etc. were studied. Though little improvement on protective scales quality was observed, results do not justify operational troubles and the additional costs and effort involved. (Author)

  20. Experimental study on bio-leaching of high sulphuric acid consumption uranium ore by adding sulphide

    International Nuclear Information System (INIS)

    Meng Yunsheng; Zheng Ying; Liu Hui; Cheng Hao; Zhou Lei; Liu Chao; Fan Baotuan; Li Jianhua

    2012-01-01

    In order to decrease acid consumption and increase leaching rate, an experiment on bio-leach-ing of low grade uranium ore by adding sulphide was done. Compared with conventional leaching method, the leaching rate of uranium is improved by 3% and the leaching period was reduced to 60 days from 90 days by bio-leaching method of adding sulphide. In order to decrease acid consumption with bio-leaching by adding sulphide obviously, robust bacteria to sulphide should be chosen. (authors)

  1. Evolutionary ecology during the rise of dioxygen in the Earth's atmosphere.

    Science.gov (United States)

    Sleep, Norman H; Bird, Dennis K

    2008-08-27

    Pre-photosynthetic niches were meagre with a productivity of much less than 10(-4) of modern photosynthesis. Serpentinization, arc volcanism and ridge-axis volcanism reliably provided H(2). Methanogens and acetogens reacted CO(2) with H(2) to obtain energy and make organic matter. These skills pre-adapted a bacterium for anoxygenic photosynthesis, probably starting with H(2) in lieu of an oxygen 'acceptor'. Use of ferrous iron and sulphide followed as abundant oxygen acceptors, allowing productivity to approach modern levels. The 'photobacterium' proliferated rooting much of the bacterial tree. Land photosynthetic microbes faced a dearth of oxygen acceptors and nutrients. A consortium of photosynthetic and soil bacteria aided weathering and access to ferrous iron. Biologically enhanced weathering led to the formation of shales and, ultimately, to granitic rocks. Already oxidized iron-poor sedimentary rocks and low-iron granites provided scant oxygen acceptors, as did freshwater in their drainages. Cyanobacteria evolved dioxygen production that relieved them of these vicissitudes. They did not immediately dominate the planet. Eventually, anoxygenic and oxygenic photosynthesis oxidized much of the Earth's crust and supplied sulphate to the ocean. Anoxygenic photosynthesis remained important until there was enough O(2) in downwelling seawater to quantitatively oxidize massive sulphides at mid-ocean ridge axes.

  2. The impact of bacteria of circulating water on apatite-nepheline ore flotation.

    Science.gov (United States)

    Evdokimova, G A; Gershenkop, A Sh; Fokina, N V

    2012-01-01

    A new phenomenon has been identified and studied-the impact of bacteria on the benefication process of non-sulphide ores using circulating water supply-a case study of apatite-nepheline ore. It is shown that bacteria deteriorate the floatability of apatite due to their interaction with active centres of calcium-containing minerals and intense flocculation, resulting in a decrease of the flotation process selectivity thus deteriorating the quality of concentrate. Based on the comparative analysis of primary sequences of 16S rRNA genes, there have been identified dominating bacteria species, recovered from the circulating water used at apatite-nepheline concentrating mills, and their phylogenetic position has been determined. All the bacteria were related to γ-Proteobacteria, including the Acinetobacter species, Pseudomonas alcaliphila, Ps. plecoglossicida, Stenotrophomonas rhizophila. A method of non-sulphide ores flotation has been developed with consideration of the bacterial factor. It consists in use of small concentrations of sodium hypochlorite, which inhibits the development of bacteria in the flotation of apatite-nepheline ores.

  3. Effect of Azospirillum brasilense and Burkholderia unamae Bacteria on Maize Photosynthetic Activity Evaluated Using the Photoacoustic Technique

    Science.gov (United States)

    Gordillo-Delgado, F.; Marín, E.; Calderón, A.

    2016-09-01

    In this work, the photosynthetic process of maize plants ( Zea mays), which were grown using seeds inoculated with plant growth promoting bacteria Azospirillum brasilense and Burkholderia unamae, was monitored. Photothermal and photobaric signals obtained by a time-resolved photoacoustic measurement configuration were used for measuring the oxygen evolution rate in situ. A frequency-resolved configuration of the method was utilized to determine the oxygen diffusion coefficient and the thermal diffusivity of the maize leaves. The latter parameters, which can be used as indicators of the photosynthetic activity of maize, are found to vary according to the plant-microbe interaction. Treatment with plant growth promoting bacteria induced a decrease in the oxygen diffusion coefficient of about 20 %.

  4. Oxidation of inorganic compounds of sulphur by various sulphur bacteria

    Energy Technology Data Exchange (ETDEWEB)

    Parker, C D; Prisk, J

    1953-01-01

    Cultures of thiobacillus thiooxidans, Th. thioparus, Th. novellus, Thiobacillus b strains t and kand Th. concretivorus, Thiobacillus x and the m strains, organisms isolated from concrete were examined to elucidate the mode of oxidation and to establish the identity of the organisms recently isolated from corroded concrete. Thiosulphate was oxidized by all these bacteria. Th. thiooxidans, Th. concretivorus and Thiobacillus x first converted it to tetrathionate and sulphate and then oxidized the tetrathionate to sulphate and free sulphuric acid. Thiobaciullus x differed from the other two in that, owing to a lesser acid tolerance, some tetrathionate was found in the final products of oxidation. Th. Thioparus converted thiosulphate to sulphate and sulphur, followed by partial oxidation of the sulphur to sulphuric acid. Th. novellus produced sulphate and sulphuric acid. Thiobacillus b, the t and k strains and the m strains formed sulphate and tetrathionate with temporary increase in pH value; only Thiobacillus x oxidized tetrationate, yielding sulphate and sulphuric acid. Elementary sulphur was oxidized by Th. thiooxidans, th. Concretivorus, thiobacillus x and Th. thioparus; the rates of oxidation decreased in that order, and the only product was sulphuric acid. Hydrogen sulphide was oxidized only at low concentrations and only by th. Concretivorus and Thiobacillus x; sulphuric acid was the end-product, and elementary sulphur may have been an intermediate. Thiobacillus x differed from Th. thiooxidans in pH range for growth and from Th. thioparus in its method of oxidation of thiosulphate, tetrathionate and H/sub 2/S. The m strains were similar to thiobacillus b and the t and k strains of trautwein.

  5. Lactate has the potential to promote hydrogen sulphide formation in the human colon.

    Science.gov (United States)

    Marquet, Perrine; Duncan, Sylvia H; Chassard, Christophe; Bernalier-Donadille, Annick; Flint, Harry J

    2009-10-01

    High concentrations of sulphide are toxic for the gut epithelium and may contribute to bowel disease. Lactate is a favoured cosubstrate for the sulphate-reducing colonic bacterium Desulfovibrio piger, as shown here by the stimulation of sulphide formation by D. piger DSM749 by lactate in the presence of sulphate. Sulphide formation by D. piger was also stimulated in cocultures with the lactate-producing bacterium Bifidobacterium adolescentis L2-32. Other lactate-utilizing bacteria such as the butyrate-producing species Eubacterium hallii and Anaerostipes caccae are, however, expected to be in competition with the sulphate-reducing bacteria (SRB) for the lactate formed in the human colon. Strains of E. hallii and A. caccae produced 65% and 96% less butyrate from lactate, respectively, in a coculture with D. piger DSM749 than in a pure culture. In triculture experiments involving B. adolescentis L2-32, up to 50% inhibition of butyrate formation by E. hallii and A. caccae was observed in the presence of D. piger DSM749. On the other hand, sulphide formation by D. piger was unaffected by E. hallii or A. caccae in these cocultures and tricultures. These experiments strongly suggest that lactate can stimulate sulphide formation by SRB present in the colon, with possible consequences for conditions such as colitis.

  6. Removal of radioactivity and safe vegetables cultivation from highly radioactivity polluted soil in Fukushima using photosynthetic bacteria

    International Nuclear Information System (INIS)

    Sasaki, Kei; Okagawa, Masakazu; Takeno, Kenji; Shinkawa, Hidenori; Sasaki, Ken

    2015-01-01

    The soil pollution caused by radioactive substances released from the accident of TEPCO Fukushima Daiichi Nuclear Power Station has been still serious interference against agricultural reconstruction. This study used the soil contaminated with high radioactivity (13,602∼87,181 Bq/kg) in Namie Town, Fukushima Prefecture, and performed decontamination using photosynthetic bacteria in a simple outdoor practical test using a 60 L container. Using the soil after decontamination, the authors cultivated vegetables such as komatsuna (Japanese mustard spinach), and bok choy, the results of which are reported. As photosynthetic bacteria, Rhodobacter shaerodes SSI species was used. This paper describes the cultivation method of bacteria, preparation method of immobilization grain, decontamination method, and cultivation method of vegetables. As a result of the experiment, the decontamination efficient of the soil was between 59.5 to 73.3%, and cultured vegetables passed the edible reference value (edible criteria for infants: 50 Bq/kg FW), which was the success of the experiment. (A.O.)

  7. Modelling excitonic energy transfer in the photosynthetic unit of purple bacteria

    International Nuclear Information System (INIS)

    Linnanto, J.M.; Korppi-Tommola, J.E.I.

    2009-01-01

    Molecular mechanics and quantum chemical configuration interaction calculations in combination with exciton theory were used to predict vibronic energies and eigenstates of light harvesting antennae and the reaction centre and to evaluate excitation energy transfer rates in the photosynthetic unit of purple bacteria. Excitation energy transfer rates were calculated by using the transition matrix formalism and exciton basis sets of the interacting antenna systems. Energy transfer rates of 600-800 fs from B800 ring to B850 ring in the LH2 antenna, 3-10 ps from LH2 to LH2 antenna, 2-8 ps from LH2 to LH1 antenna and finally 30-70 ps from LH1 to the reaction centre were obtained. Dependencies of energy transfer rates on lateral and vertical inter-complex distances were determined. The results indicate that a fair amount of spatial heterogeneity of antenna complexes in the photosynthetic membrane is tolerated without much loss in excitation energy transfer efficiency

  8. Modelling excitonic energy transfer in the photosynthetic unit of purple bacteria

    Energy Technology Data Exchange (ETDEWEB)

    Linnanto, J.M. [Department of Chemistry, P.O. Box 35, FIN-40014 University of Jyvaeskylae, Jyvaeskylae (Finland)], E-mail: juha.m.linnanto@jyu.fi; Korppi-Tommola, J.E.I. [Department of Chemistry, P.O. Box 35, FIN-40014 University of Jyvaeskylae, Jyvaeskylae (Finland)

    2009-02-23

    Molecular mechanics and quantum chemical configuration interaction calculations in combination with exciton theory were used to predict vibronic energies and eigenstates of light harvesting antennae and the reaction centre and to evaluate excitation energy transfer rates in the photosynthetic unit of purple bacteria. Excitation energy transfer rates were calculated by using the transition matrix formalism and exciton basis sets of the interacting antenna systems. Energy transfer rates of 600-800 fs from B800 ring to B850 ring in the LH2 antenna, 3-10 ps from LH2 to LH2 antenna, 2-8 ps from LH2 to LH1 antenna and finally 30-70 ps from LH1 to the reaction centre were obtained. Dependencies of energy transfer rates on lateral and vertical inter-complex distances were determined. The results indicate that a fair amount of spatial heterogeneity of antenna complexes in the photosynthetic membrane is tolerated without much loss in excitation energy transfer efficiency.

  9. Anaerobic sulfide-oxidation in marine colorless sulfur-oxidizing bacteria

    Digital Repository Service at National Institute of Oceanography (India)

    LokaBharathi, P.A.; Nair, S.; Chandramohan, D.

    Colorless sulfur-oxidizing bacteria are ubiquitous in Indian waters and have the ability to oxidize sulfide under anaerobic conditions. These bacteria can not only mediate the sulfur cycle oxidatively but also the nitrogen cycle reductively without...

  10. Non-photosynthetic plastids as hosts for metabolic engineering.

    Science.gov (United States)

    Mellor, Silas Busck; Behrendorff, James B Y H; Nielsen, Agnieszka Zygadlo; Jensen, Poul Erik; Pribil, Mathias

    2018-04-13

    Using plants as hosts for production of complex, high-value compounds and therapeutic proteins has gained increasing momentum over the past decade. Recent advances in metabolic engineering techniques using synthetic biology have set the stage for production yields to become economically attractive, but more refined design strategies are required to increase product yields without compromising development and growth of the host system. The ability of plant cells to differentiate into various tissues in combination with a high level of cellular compartmentalization represents so far the most unexploited plant-specific resource. Plant cells contain organelles called plastids that retain their own genome, harbour unique biosynthetic pathways and differentiate into distinct plastid types upon environmental and developmental cues. Chloroplasts, the plastid type hosting the photosynthetic processes in green tissues, have proven to be suitable for high yield protein and bio-compound production. Unfortunately, chloroplast manipulation often affects photosynthetic efficiency and therefore plant fitness. In this respect, plastids of non-photosynthetic tissues, which have focused metabolisms for synthesis and storage of particular classes of compounds, might prove more suitable for engineering the production and storage of non-native metabolites without affecting plant fitness. This review provides the current state of knowledge on the molecular mechanisms involved in plastid differentiation and focuses on non-photosynthetic plastids as alternative biotechnological platforms for metabolic engineering. © 2018 The Author(s). Published by Portland Press Limited on behalf of the Biochemical Society.

  11. Molecular Regulation of Photosynthetic Carbon Dioxide Fixation in Nonsulfur Purple Bacteria

    Energy Technology Data Exchange (ETDEWEB)

    Tabita, Fred Robert [The Ohio State Univ., Columbus, OH (United States)

    2015-12-01

    The overall objective of this project is to determine the mechanism by which a transcriptional activator protein affects CO2 fixation (cbb) gene expression in nonsulfur purple photosynthetic bacteria, with special emphasis to Rhodobacter sphaeroides and with comparison to Rhodopseudomonas palustris. These studies culminated in several publications which indicated that additional regulators interact with the master regulator CbbR in both R. sphaeroides and R. palustris. In addition, the interactive control of the carbon and nitrogen assimilatory pathways was studied and unique regulatory signals were discovered.

  12. Evaluation of hydrogen sulphide test for detection of fecal coliform ...

    African Journals Online (AJOL)

    GREGO

    2007-03-19

    Mar 19, 2007 ... on production of hydrogen sulphide by bacteria that are associated with fecal contamination. This rapid fields test needs no technical staff and the cost is lower than ..... Sources and Potable Water Supplies in Peru.

  13. Development of a Photosynthetic Microbial Electrochemical Cell (PMEC Reactor Coupled with Dark Fermentation of Organic Wastes: Medium Term Perspectives

    Directory of Open Access Journals (Sweden)

    Samir Bensaid

    2015-01-01

    Full Text Available In this article the concept, the materials and the exploitation potential of a photosynthetic microbial electrochemical cell for the production of hydrogen driven by solar power are investigated. In a photosynthetic microbial electrochemical cell, which is based on photosynthetic microorganisms confined to an anode and heterotrophic bacteria confined to a cathode, water is split by bacteria hosted in the anode bioactive film. The generated electrons are conveyed through external “bio-appendages” developed by the bacteria to transparent nano-pillars made of indium tin oxide (ITO, Fluorine-doped tin oxide (FTO or other conducting materials, and then transferred to the cathode. On the other hand, the generated protons diffuse to the cathode via a polymer electrolyte membrane, where they are reduced by the electrons by heterotrophic bacteria growing attached to a similar pillared structure as that envisaged for the anode and supplemented with a specific low cost substrate (e.g., organic waste, anaerobic digestion outlet. The generated oxygen is released to the atmosphere or stored, while the produced pure hydrogen leaves the electrode through the porous layers. In addition, the integration of the photosynthetic microbial electrochemical cell system with dark fermentation as acidogenic step of anaerobic digester, which is able to produce additional H2, and the use of microbial fuel cell, feed with the residues of dark fermentation (mainly volatile fatty acids, to produce the necessary extra-bias for the photosynthetic microbial electrochemical cell is here analyzed to reveal the potential benefits to this novel integrated technology.

  14. Method of removing hydrogen sulphide from hot gas mixtures

    Energy Technology Data Exchange (ETDEWEB)

    Furimsky, E.; Yumura, M.

    1987-12-22

    Hydrogen sulphide can be removed from hot gas mixtures by contacting the hot gas mixture at temperatures in the range of 500-900/sup 0/C with an adsorbent consisting of managanese nodules. The nodules may contain additional calcium cations. In sulphided form, the nodules are catalytically active for hydrogen sulphide decomposition to produce hydrogen. Regeneration of the adsorbent can be accomplished by roasting in an oxidizing atmosphere. The nodules can be used to treat gaseous mixtures containing up to 20% hydrogen sulfide, for example, gases produced during pyrolysis, cracking, coking, and hydrotreating processes. Experiments using the processes described in this patent are also outlined. 6 tabs.

  15. Methods to measure biomass and production of bacteria and photosynthetic microbiota and their application on illuminated lake sediments. A literature study

    International Nuclear Information System (INIS)

    Nilsson, Eva

    2001-06-01

    In the work of finding a place for long time storage of radioactive waste it is of importance to understand the surrounding ecosystems. The storage is supposed to keep the radioactive waste away from humans and nature for some hundreds of thousands of years. It is important to be able to make risk assessments for a hypothetical release and understand by which ways the radionuclides could find their way into the biota. In lakes, released radionuclides would most probably find their way into the biota through heterotrophic bacteria or auto trophic microorganisms. Therefore, it is important to investigate how large the biomass and production of heterotrophic bacteria and photosynthetic organisms in lakes are. This report is an overview of methods that are commonly used today for measuring biomass and production of bacteria and photosynthetic microorganisms in lakes. It elucidates advantages and drawbacks of the different methods. Some results from studies on illuminated lake sediment habitats are given. Biomass of bacteria is commonly measured in microscope after colouring the bacteria with a dye. Dyes commonly used are acridine orange and 4',6-diamino-2-phenylindole (DAPI). Biomass of photosynthetic microorganisms is also commonly measured in microscope but can also be determined by the amount of chlorophyll 'a' and other pigments. An advantage with measuring the biomass photosynthetic microorganisms in microscope is that a good resolution of the community is achieved. A disadvantage with determining the biomass by measuring the chlorophyll 'a' concentrations is that the concentrations may vary with light climate and nutrients even though the carbon biomass is constant. Methods for measuring bacterial production discussed in this report are the thymidine incorporation method, the leucine incorporation method and the frequency of dividing cell method (FDC). Methods for primary production discussed in this report are the 14 CO 2 -incorporation method, the O 2

  16. Methods to measure biomass and production of bacteria and photosynthetic microbiota and their application on illuminated lake sediments. A literature study

    Energy Technology Data Exchange (ETDEWEB)

    Nilsson, Eva [Uppsala Univ. (Sweden). Dept. of Limnology

    2001-06-01

    In the work of finding a place for long time storage of radioactive waste it is of importance to understand the surrounding ecosystems. The storage is supposed to keep the radioactive waste away from humans and nature for some hundreds of thousands of years. It is important to be able to make risk assessments for a hypothetical release and understand by which ways the radionuclides could find their way into the biota. In lakes, released radionuclides would most probably find their way into the biota through heterotrophic bacteria or auto trophic microorganisms. Therefore, it is important to investigate how large the biomass and production of heterotrophic bacteria and photosynthetic organisms in lakes are. This report is an overview of methods that are commonly used today for measuring biomass and production of bacteria and photosynthetic microorganisms in lakes. It elucidates advantages and drawbacks of the different methods. Some results from studies on illuminated lake sediment habitats are given. Biomass of bacteria is commonly measured in microscope after colouring the bacteria with a dye. Dyes commonly used are acridine orange and 4',6-diamino-2-phenylindole (DAPI). Biomass of photosynthetic microorganisms is also commonly measured in microscope but can also be determined by the amount of chlorophyll 'a' and other pigments. An advantage with measuring the biomass photosynthetic microorganisms in microscope is that a good resolution of the community is achieved. A disadvantage with determining the biomass by measuring the chlorophyll 'a' concentrations is that the concentrations may vary with light climate and nutrients even though the carbon biomass is constant. Methods for measuring bacterial production discussed in this report are the thymidine incorporation method, the leucine incorporation method and the frequency of dividing cell method (FDC). Methods for primary production discussed in this report are the {sup 14}CO{sub 2

  17. Acid leaching of oxide-sulphide copper ore prior the flotation: A way for an increased metal recovery

    Directory of Open Access Journals (Sweden)

    Sokić Miroslav D.

    2015-01-01

    Full Text Available Copper mine "Cerovo"- East Serbia as well as the other ore bodies in its vicinity contain a significant amount of oxide copper minerals in their uper layers (>40%. Processing of such mixed ores by the existing concentration technologies leads to a substantial copper losses (<60%. Reduction of "oxide copper", by acid leaching prior the flotation concentration, can increase the overall copper efficiency up to more than 70% in the single-stage leaching, achieving an efficiency in the flotation concentration stage higher than 75%. Based on the performed experimental results the flow sheet for processing of the mixed oxide-sulphide copper ore is proposed.

  18. Identification and growth conditions of purple non-sulfur photosynthetic bacteria isolated from palm oil mill effluent

    International Nuclear Information System (INIS)

    Radziah Ariffin

    2004-01-01

    An indigenous strain of the purple non-sulphur photosynthetic bacterium, isolated from palm oil mill effluent was presumably identified as species of Rhodopseudomonas palustris. Cultivation in synthetic medium under different conditions indicated that it gave maximum carotenoid and bacteriophyll synthesis under anaerobic conditions in the light with values of 12.6 and 108.1 mg/g dry cell weight respectively. These values were significantly higher than the pigment content obtained from aerobic cultivation. The specific growth rates in anaerobic was twice those in aerobic conditions in the light. Growth was not occurred in anaerobic or aerobic conditions in the dark. (Author)

  19. Combustion synthesis of cadmium sulphide nanomaterials

    Indian Academy of Sciences (India)

    Anion-doped cadmium sulphide nanomaterials have been synthesized by using combustionmethod at normal atmospheric conditions. Oxidant/fuel ratios have been optimized in order to obtain CdS with best characteristics. Formation of CdS and size of crystallite were identified by X-ray diffraction and confirmed by ...

  20. Protection of stainless-steels against corrosion in sulphidizing environments by Ce oxide coatings: X-ray absorption and thermogravimetric studies

    NARCIS (Netherlands)

    Fransen, T.; Gellings, P.J.; Fuggle, J.C.; van der Laan, G.; Esteva, J.-M.; Karnatak, R.C.

    1985-01-01

    In this paper a study is reported concerning ceramic coatings containing cerium oxide, prepared by the sol-gel method, used to protect Incoloy 800H against sulphidation. When the coating is sintered in air at 850°C good protection is obtained. In an X-ray absorption spectroscopic study of the

  1. Laboratory assessment of bioleaching of shallow eutrophic sediment by immobilized photosynthetic bacteria.

    Science.gov (United States)

    Sun, Shiyong; Fan, Shenglan; Shen, Kexuan; Lin, Shen; Nie, Xiaoqin; Liu, Mingxue; Dong, Faqin; Li, Jian

    2017-10-01

    Eutrophic sediment is a serious problem in ecosystem restoration, especially in shallow lake ecosystems. We present a novel bioleaching approach to treat shallow eutrophic sediment with the objective of preventing the release of nitrate, phosphate, and organic compounds from the sediment to the water column, using porous mineral-immobilized photosynthetic bacteria (PSB). Bioactivity of bacteria was maintained during the immobilization process. Immobilized PSB beads were directly deposited on the sediment surface. The deposited PSB utilized pollutants diffused from the sediment as a nutritive matrix for growth. We evaluated the effects of light condition, temperature, initial pH, amount of PSB beads, and frequency of addition of PSB beads for contaminant removal efficiency during bioleaching operations. The presented study indicated that immobilized PSB beads using porous minerals as substrates have considerable application potential in bioremediation of shallow eutrophic lakes.

  2. Solutions for reducing dissolved hydrogen sulphide in the Black Sea by electrochemical oxidation

    International Nuclear Information System (INIS)

    Ciocanea, Adrian; Budea, Sanda; Radulescu, Gabriel

    2007-01-01

    Anaerobic disintegration of organic matter is a particular phenomenon in the Black Sea because of the set up of deposits of hydrogen sulphide, H 2 S, having high concentrations. The formation of such deposits is due to the absence of upward streams at depths larger than 100 meters. In Black Sea there is an oxic layer located roughly between 50 and 200 meters from which downwards begins the anoxic layer. If the equilibrium in Black Sea is not kept under control, an ecological disaster is possible. The first signals will be observed in surface waters, than, if the equilibrium is further disturbed the depth sulphides and the hydrogen sulphide deposits can develop up to inflammable and even explosive phases. This paper presents some solutions to reduce the hydrogen sulphide from Black Sea with a particular stress upon the electrochemical method. (authors)

  3. Bacteriophytochrome controls carotenoid-independent response to photodynamic stress in a non-photosynthetic rhizobacterium, Azospirillum brasilense Sp7.

    Science.gov (United States)

    Kumar, Santosh; Kateriya, Suneel; Singh, Vijay Shankar; Tanwar, Meenakshi; Agarwal, Shweta; Singh, Hina; Khurana, Jitendra Paul; Amla, Devinder Vijay; Tripathi, Anil Kumar

    2012-01-01

    Ever since the discovery of the role of bacteriophytochrome (BphP) in inducing carotenoid synthesis in Deinococcus radiodurans in response to light the role of BphPs in other non-photosynthetic bacteria is not clear yet. Azospirillum brasilense, a non-photosynthetic rhizobacterium, harbours a pair of BphPs out of which AbBphP1 is a homolog of AtBphP1 of Agrobacterium tumefaciens. By overexpression, purification, biochemical and spectral characterization we have shown that AbBphP1 is a photochromic bacteriophytochrome. Phenotypic study of the ΔAbBphP1 mutant showed that it is required for the survival of A. brasilense on minimal medium under red light. The mutant also showed reduced chemotaxis towards dicarboxylates and increased sensitivity to the photooxidative stress. Unlike D. radiodurans, AbBphP1 was not involved in controlling carotenoid synthesis. Proteome analysis of the ΔAbBphP1 indicated that AbBphP1 is involved in inducing a cellular response that enables A. brasilense in regenerating proteins that might be damaged due to photodynamic stress.

  4. Patterns of Macroinvertebrate and Fish Diversity in Freshwater Sulphide Springs

    Directory of Open Access Journals (Sweden)

    Ryan Greenway

    2014-09-01

    Full Text Available Extreme environments are characterised by the presence of physicochemical stressors and provide unique study systems to address problems in evolutionary ecology research. Sulphide springs provide an example of extreme freshwater environments; because hydrogen sulphide’s adverse physiological effects induce mortality in metazoans even at micromolar concentrations. Sulphide springs occur worldwide, but while microbial communities in sulphide springs have received broad attention, little is known about macroinvertebrates and fish inhabiting these toxic environments. We reviewed qualitative occurrence records of sulphide spring faunas on a global scale and present a quantitative case study comparing diversity patterns in sulphidic and adjacent non-sulphidic habitats across replicated river drainages in Southern Mexico. While detailed studies in most regions of the world remain scarce, available data suggests that sulphide spring faunas are characterised by low species richness. Dipterans (among macroinvertebrates and cyprinodontiforms (among fishes appear to dominate the communities in these habitats. At least in fish, there is evidence for the presence of highly endemic species and populations exclusively inhabiting sulphide springs. We provide a detailed discussion of traits that might predispose certain taxonomic groups to colonize sulphide springs, how colonizers subsequently adapt to cope with sulphide toxicity, and how adaptation may be linked to speciation processes.

  5. Carbon steel protection in G.S. [Girldler sulphide] plants: Pt. 7

    International Nuclear Information System (INIS)

    Lires, Osvaldo; Delfino, Cristina; Rojo, Enrique.

    1989-01-01

    In order to protect carbon steel towers and piping of a GS experimental heavy water plant against corrosion produced by the action of aqueous solutions of hydrogen sulphide, a method, elsewhere published, was developed. Carbon steel exposed to saturated aqueous solutions of hydrogen sulphide forms iron sulphide scales. In oxygen free solutions, evolution of corrosion follows the sequence mackinawite → cubic ferrous sulphide → troilite → pyrrotite → pyrite. Scales formed by pyrrotite and pyrite are the most protective layers (these are obtained at 130 deg C, 2 MPa for a period of 14 days). During a plant shutdown procedures, the carbon steel protected with those scales is exposed to water and highly humid air; under such conditions oxidation is unavoidable. Later, treatment in plant conditions does not regenerate scales because the composition of regenerated scales involves more soluble iron sulphides such as mackinawite and troilite. Therefore, it is not recommendable to expose the protective scales to atmospherical conditions. (Author)

  6. Effect of radiation on activity of sulphate reducing bacteria

    International Nuclear Information System (INIS)

    Agaev, N.M.; Smorodin, A.E.; Gusejnov, M.M.

    1985-01-01

    The effect of γ-radiation on activity of sulphate reducing bacteria has been studied. Concentration of biogenic hydrogen, generated in the medium, is the main criterion, characterizing corrosion activity of the bacteria studied. The developed method of suppression of active development of sulfate reducing bacteria considerably reduces, and at lethal doses of γ-radiation eliminates altogether the bacteria activity and formation of the main corrosion agent-hydrogen sulphide-in the medium and that, in its turn, liquidates hydrogen sulphide corrosion

  7. Single-Stroke Synthesis of Tin Sulphide/Oxide Nanocomposites Within Engineering Thermoplastic and Their Humidity Response.

    Science.gov (United States)

    Adkar, Dattatraya; Adhyapak, Parag; Mulik, Uttamrao; Jadkar, Sandesh; Vutova, Katia; Amalnerkar, Dinesh

    2018-05-01

    SnS nanostructured materials have attracted enormous interest due to their important properties and potential application in low cost solar energy conversion systems and optical devices. From the perspective of SnS based device fabrication, we offer single-stroke in-situ technique for the generation of Sn based sulphide and oxide nanostructures inside the polymer network via polymer-inorganic solid state reaction route. In this method, polyphenylene sulphide (PPS)-an engineering thermoplastic-acts as chalcogen source as well as stabilizing matrix for the resultant nano products. Typical solid state reaction was accomplished by simply heating the physical admixtures of the tin salts (viz. tin acetate/tin chloride) with PPS at the crystalline melting temperature (285 °C) of PPS in inert atmosphere. The synthesized products were characterized by using various physicochemical characterization techniques. The prima facie observations suggest the concurrent formation of nanocrystalline SnS with extraneous oxide phase. The TEM analysis revealed formation of nanosized particles of assorted morphological features with polydispersity confined to 5 to 50 nm. However, agglomerated particles of nano to submicron size were also observed. The humidity sensing characterization of these nanocomposites was also performed. The resistivity response with the level of humidity (20 to 85% RH) was compared for these nanocomposites. The linear response was obtained for both the products. Nevertheless, the nanocomposite product obtained from acetate precursor showed higher sensitivity towards the humidity than that of one prepared from chloride precursor.

  8. Bioleaching of pollymetallic sulphide concentrate using thermophilic bacteria

    Directory of Open Access Journals (Sweden)

    Vuković Milovan

    2014-01-01

    Full Text Available An extreme thermophilic, iron-sulphur oxidising bacterial culture was isolated and adapted to tolerate high metal and solids concentrations at 70°C. Following isolation and adaptation, the culture was used in a batch bioleach test employing a 5-l glass standard magnetic agitated and aerated reactor, for the bioleaching of a copper-lead-zinc collective concentrate. The culture exhibited stable leach performance over the period of leach operation and overall copper and zinc extractions higher than 97%. Lead sulphide is transformed into lead sulphate remaining in the bioleach residue due to the low solubility in sulphate media. Brine leaching of bioleach residue yields 95% lead extraction. [Projekat Ministarstva nauke Republike Srbije, br. 34023

  9. Determination of Ammonia Oxidizing Bacteria and Nitrate Oxidizing Bacteria in Wastewater and Bioreactors

    Science.gov (United States)

    Francis, Somilez Asya

    2014-01-01

    The process of water purification has many different physical, chemical, and biological processes. One part of the biological process is the task of ammonia oxidizing bacteria (AOB) and nitrite oxidizing bacteria (NOB). Both play critical roles in the treatment of wastewater by oxidizing toxic compounds. The broad term is nitrification, a naturally occurring process that is carried out by AOB and NOB by using oxidation to convert ammonia to nitrite and nitrite to nitrate. To monitor this biological activity, bacterial staining was performed on wastewater contained in inoculum tanks and biofilm samples from bioreactors. Using microscopy and qPCR, the purpose of this experiment was to determine if the population of AOB and NOB in wastewater and membrane bioreactors changed depending on temperature and hibernation conditions to determine the optimal parameters for AOB/NOB culture to effectively clean wastewater.

  10. The rapid size- and shape-controlled continuous hydrothermal synthesis of metal sulphide nanomaterials

    Science.gov (United States)

    Dunne, Peter W.; Starkey, Chris L.; Gimeno-Fabra, Miquel; Lester, Edward H.

    2014-01-01

    Continuous flow hydrothermal synthesis offers a cheap, green and highly scalable route for the preparation of inorganic nanomaterials which has predominantly been applied to metal oxide based materials. In this work we report the first continuous flow hydrothermal synthesis of metal sulphide nanomaterials. A wide range of binary metal sulphides, ZnS, CdS, PbS, CuS, Fe(1-x)S and Bi2S3, have been synthesised. By varying the reaction conditions two different mechanisms may be invoked; a growth dominated route which permits the formation of nanostructured sulphide materials, and a nucleation driven process which produces nanoparticles with temperature dependent size control. This offers a new and industrially viable route to a wide range of metal sulphide nanoparticles with facile size and shape control.Continuous flow hydrothermal synthesis offers a cheap, green and highly scalable route for the preparation of inorganic nanomaterials which has predominantly been applied to metal oxide based materials. In this work we report the first continuous flow hydrothermal synthesis of metal sulphide nanomaterials. A wide range of binary metal sulphides, ZnS, CdS, PbS, CuS, Fe(1-x)S and Bi2S3, have been synthesised. By varying the reaction conditions two different mechanisms may be invoked; a growth dominated route which permits the formation of nanostructured sulphide materials, and a nucleation driven process which produces nanoparticles with temperature dependent size control. This offers a new and industrially viable route to a wide range of metal sulphide nanoparticles with facile size and shape control. Electronic supplementary information (ESI) available: Experimental details, refinement procedure, fluorescence spectra of ZnS samples. See DOI: 10.1039/c3nr05749f

  11. Respiratory processes in non-photosynthetic plastids

    Science.gov (United States)

    Renato, Marta; Boronat, Albert; Azcón-Bieto, Joaquín

    2015-01-01

    Chlororespiration is a respiratory process located in chloroplast thylakoids which consists in an electron transport chain from NAD(P)H to oxygen. This respiratory chain involves the NAD(P)H dehydrogenase complex, the plastoquinone pool and the plastid terminal oxidase (PTOX), and it probably acts as a safety valve to prevent the over-reduction of the photosynthetic machinery in stress conditions. The existence of a similar respiratory activity in non-photosynthetic plastids has been less studied. Recently, it has been reported that tomato fruit chromoplasts present an oxygen consumption activity linked to ATP synthesis. Etioplasts and amyloplasts contain several electron carriers and some subunits of the ATP synthase, so they could harbor a similar respiratory process. This review provides an update on the study about respiratory processes in chromoplasts, identifying the major gaps that need to be addressed in future research. It also reviews the proteomic data of etioplasts and amyloplasts, which suggest the presence of a respiratory electron transport chain in these plastids. PMID:26236317

  12. Respiratory processes in non-photosynthetic plastids

    Directory of Open Access Journals (Sweden)

    Marta eRenato

    2015-07-01

    Full Text Available Chlororespiration is a respiratory process located in chloroplast thylakoids which consists in an electron transport chain from NAD(PH to oxygen. This respiratory chain involves the NAD(PH dehydrogenase complex, the plastoquinone pool and the plastid terminal oxidase (PTOX, and it probably acts as a safety valve to prevent the over-reduction of the photosynthetic machinery in stress conditions. The existence of a similar respiratory activity in non-photosynthetic plastids has been less studied. Recently, it has been reported that tomato fruit chromoplasts present an oxygen consumption activity linked to ATP synthesis. Etioplasts and amyloplasts contain several electron carriers and some subunits of the ATP synthase, so they could harbor a similar respiratory process. This review provides an update on the study about respiratory processes in chromoplasts, identifying the major gaps that need to be addressed in future research. It also reviews the proteomic data of etioplasts and amyloplasts, which suggest the presence of a respiratory electron transport chain in these plastids.

  13. Corrosion of copper alloys in sulphide containing district heting systems

    DEFF Research Database (Denmark)

    Thorarinsdottir, R.I.; Maahn, Ernst Emanuel

    1999-01-01

    Copper and some copper alloys are prone to corrosion in sulphide containing geothermal water analogous to corrosion observed in district heating systems containing sulphide due to sulphate reducing bacteria. In order to study the corrosion of copper alloys under practical conditions a test...... was carried out at four sites in the Reykjavik District Heating System. The geothermal water chemistry is different at each site. The corrosion rate and the amount and chemical composition of deposits on weight loss coupons of six different copper alloys are described after exposure of 12 and 18 months......, respectively. Some major differences in scaling composition and the degree of corrosion attack are observed between alloys and water types....

  14. Study by vibration spectrometry of addition compounds of boron fluoride with some alkyl oxides, sulphides and selenides

    International Nuclear Information System (INIS)

    Le Calve, Jacques

    1966-01-01

    This research thesis reports the study of the vibration spectrum of some addition compounds of boron fluoride with alkyl oxides, sulphides and selenides. The objective was first the assignment of spectra, and then the study of the influence of the formation of a coordination bound on boron fluoride vibrations and on that of its donor. The author also tried to define correlations between spectrum and structures, and studied the effects of physical status and solvents [fr

  15. Formation and colloidal behaviour of elemental sulphur produced from the biological oxidation of hydrogensulphide

    NARCIS (Netherlands)

    Janssen, A.J.H.

    1996-01-01


    The formation and aggregation of elemental sulphur from the microbiological oxidation of hydrogensulphide (H 2 S) by a mixed population of aerobic Thiobacillus -like bacteria has been investigated. Sulphide is

  16. Protection of Mild Steel Against Sulphides Corrosion In Petroleum Oil Industry

    International Nuclear Information System (INIS)

    Soliman, A.M.H.

    2004-01-01

    The aggressive properties of the media encountered when drilling for oil derive from the fact that they contain an abundance of mineralized water, as well as hydrogen sulphide and carbon dioxide. Particularly vulnerable to corrosion and installation of old deposits, where highly mineralized water or sometimes even sea water, is pumped into the bed so as to increase the oil yield, and where acid treatment is also carried out, the injection of such water into the bed creates favourable conditions for the development of microbiological processes promoting the life activity of sulphate-reducing bacteria and contributing to the appearance of hydrogen sulphide in the system

  17. Fossilization of Iron-Oxidizing Bacteria at Hydrothermal Vents: a Useful Biosignature on Mars?

    Science.gov (United States)

    Leveille, R. J.; Lui, S.

    2009-05-01

    -concentric growth bands. In the bioreactor cultures, constant conditions led to abundant microbial growth and formation of an iron oxyhydroxide precipitate, either in direct association with the cells or within the growth medium. This suggests that not all of the iron precipitation is biogenic in origin. Cells typically show a filamentous morphology reminiscent of the mineral-encrusted forms observed in the natural samples. Continuing work includes high-resolution TEM observations of cultured organisms, examination of 2-year long in situ seafloor incubation experiments, and bioreactor silicification experiments in order to better understand the roles of iron and silica in the fossilization process. Microaerophilic iron oxidation could have existed on the early Earth in environments containing small amounts of oxygen produced either by locally concentrated photosynthetic microorganisms (e.g., cyanobacteria) or abiotically, as proposed for the subsurface of the Fe-dominated Rio Tinto (Spain) basin system. By analogy, similar subsurface or near-surface microaerophilic environments could have existed on Mars in the past. The distinctive morphologies and mineralization patterns of iron oxidizing bacteria could be a useful biosignature to search for on Mars. Deposits and biogenic features similar to those described here could theoretically be identified on Mars with existing imaging and analytical technologies. Therefore, future missions to Mars should target ancient hydrothermal systems, some of which have been putatively identified already.

  18. Bioleaching of a complex nickel–iron concentrate by mesophile bacteria.

    OpenAIRE

    Santos, Luciano Rodrigo Gomes; Barbosa, Alexandre Ferraz; Souza, Adelson Dias de; Leão, Versiane Albis

    2006-01-01

    This work investigates the bioleaching of a complex nickel–iron concentrate (pentlandite, pyrrhotite, and minor amounts of chalcopyrite) using acidophile iron-oxidizing bacteria. It aims to improve the understanding of the mechanism of bacterial action on nickel sulphide bioleaching. The effects of the external addition of Fe(II) and the mineralogical assembly on the extraction of nickel are evaluated. A high nickel extraction (around 70%) can be achieved in batch experiments. Moreover, the e...

  19. Isolation of non-sulphur photosynthetic bacterial strains efficient in hydrogen production at elevated temperatures

    Energy Technology Data Exchange (ETDEWEB)

    Singh, S.P.; Srivastava, S.C. (Banaras Hindu Univ., Varanasi (IN). Centre of Advanced Study in Botany)

    1991-01-01

    Four strains of non-sulphur photosynthetic bacteria were isolated from root zone associations of aquatic plants like Azolla, Salvinia and Eichhornia, as well as the deep-water rice. Based on the gross cell morphology and pigmentation, the isolates resembled Rhodopseudomonas sp. and have been designated as BHU strains 1 to 4, respectively. When subjected to elevated temperature (from 33-45{sup o}C), substantial growth/hydrogen production could be observed only in strains 1 and 4. Strains 2 and 3 on the other hand, showed diminished growth and negligible hydrogen photoproduction. The BHU strains 1 and 4 have been selected as the most active (thermostable) hydrogen producing strains of local origin as far as the Indian tropical climate is concerned. (author).

  20. Precipitation of metal sulphides using gaseous hydrogen sulphide : mathematical modelling

    NARCIS (Netherlands)

    Tarazi, Mousa Al-; Heesink, A. Bert M.; Versteeg, Geert F.

    2004-01-01

    A mathematical model has been developed that describes the precipitation of metal sulphides in an aqueous solution containing two different heavy metal ions. The solution is assumed to consist of a well-mixed bulk and a boundary layer that is contacted with hydrogen sulphide gas. The model makes use

  1. Physiology and genetics of sulfur-oxidizing bacteria.

    Science.gov (United States)

    Friedrich, C G

    1998-01-01

    Reduced inorganic sulfur compounds are oxidized by members of the domains Archaea and Bacteria. These compounds are used as electron donors for anaerobic phototrophic and aerobic chemotrophic growth, and are mostly oxidized to sulfate. Different enzymes mediate the conversion of various reduced sulfur compounds. Their physiological function in sulfur oxidation is considered (i) mostly from the biochemical characterization of the enzymatic reaction, (ii) rarely from the regulation of their formation, and (iii) only in a few cases from the mutational gene inactivation and characterization of the resulting mutant phenotype. In this review the sulfur-metabolizing reactions of selected phototrophic and of chemotrophic prokaryotes are discussed. These comprise an archaeon, a cyanobacterium, green sulfur bacteria, and selected phototrophic and chemotrophic proteobacteria. The genetic systems are summarized which are presently available for these organisms, and which can be used to study the molecular basis of their dissimilatory sulfur metabolism. Two groups of thiobacteria can be distinguished: those able to grow with tetrathionate and other reduced sulfur compounds, and those unable to do so. This distinction can be made irrespective of their phototrophic or chemotrophic metabolism, neutrophilic or acidophilic nature, and may indicate a mechanism different from that of thiosulfate oxidation. However, the core enzyme for tetrathionate oxidation has not been identified so far. Several phototrophic bacteria utilize hydrogen sulfide, which is considered to be oxidized by flavocytochrome c owing to its in vitro activity. However, the function of flavocytochrome c in vivo may be different, because it is missing in other hydrogen sulfide-oxidizing bacteria, but is present in most thiosulfate-oxidizing bacteria. A possible function of flavocytochrome c is discussed based on biophysical studies, and the identification of a flavocytochrome in the operon encoding enzymes involved

  2. Non-photosynthetic plastids as hosts for metabolic engineering

    DEFF Research Database (Denmark)

    Mellor, Silas Busck; Behrendorff, James Bruce Yarnton H; Nielsen, Agnieszka Janina Zygadlo

    2018-01-01

    Using plants as hosts for production of complex, high-value compounds and therapeutic proteins has gained increasing momentum over the past decade. Recent advances in metabolic engineering techniques using synthetic biology have set the stage for production yields to become economically attractive......, but more refined design strategies are required to increase product yields without compromising development and growth of the host system. The ability of plant cells to differentiate into various tissues in combination with a high level of cellular compartmentalization represents so far the most...... in green tissues, have proven to be suitable for high yield protein and bio-compound production. Unfortunately, chloroplast manipulation often affects photosynthetic efficiency and therefore plant fitness. In this respect, plastids of non-photosynthetic tissues, which have focused metabolisms for synthesis...

  3. Application of Cavity Enhanced Absorption Spectroscopy to the Detection of Nitric Oxide, Carbonyl Sulphide, and Ethane—Breath Biomarkers of Serious Diseases

    Science.gov (United States)

    Wojtas, Jacek

    2015-01-01

    The paper presents one of the laser absorption spectroscopy techniques as an effective tool for sensitive analysis of trace gas species in human breath. Characterization of nitric oxide, carbonyl sulphide and ethane, and the selection of their absorption lines are described. Experiments with some biomarkers showed that detection of pathogenic changes at the molecular level is possible using this technique. Thanks to cavity enhanced spectroscopy application, detection limits at the ppb-level and short measurements time (ethane, respectively. The conducted experiments show that this type of diagnosis would significantly increase chances for effective therapy of some diseases. Additionally, it offers non-invasive and real time measurements, high sensitivity and selectivity as well as minimizing discomfort for patients. For that reason, such sensors can be used in screening for early detection of serious diseases. PMID:26091398

  4. Iron biomineralization by anaerobic neutrophilic iron-oxidizing bacteria

    DEFF Research Database (Denmark)

    Miot, Jennyfer; Benzerara, Karim; Morin, Guillaume

    2009-01-01

    Minerals formed by bio-oxidation of ferrous iron (Fe(II)) at neutral pH, their association with bacterial ultrastructures as well as their impact on the metabolism of iron-oxidizing bacteria remain poorly understood. Here, we investigated iron biomineralization by the anaerobic nitrate-dependent ......Minerals formed by bio-oxidation of ferrous iron (Fe(II)) at neutral pH, their association with bacterial ultrastructures as well as their impact on the metabolism of iron-oxidizing bacteria remain poorly understood. Here, we investigated iron biomineralization by the anaerobic nitrate...... precipitation in the periplasm (in a few tens of minutes), followed by the formation of surface-bound globules. Moreover, we frequently observed an asymmetric mineral thickening at the cell poles. In parallel, the evolution of iron oxidation was quantified by STXM: iron both contained in the bacteria...... and in the extracellular precipitates reached complete oxidation within 6 days. While a progressive oxidation of Fe in the bacteria and in the medium could be observed, spatial redox (oxido-reduction state) heterogeneities were detected at the cell poles and in the extracellular precipitates after 1 day. All...

  5. Self-sustaining, solar-driven bioelectricity generation in micro-sized microbial fuel cell using co-culture of heterotrophic and photosynthetic bacteria

    Science.gov (United States)

    Liu, Lin; Choi, Seokheun

    2017-04-01

    Among many energy harvesting techniques with great potential, microbial fuel cell (MFC) technology is arguably the most underdeveloped. Even so, excitement is building, as microorganisms can harvest electrical power from any biodegradable organic source (e.g. wastewater) that is readily available in resource-limited settings. Nevertheless, the requirement for endless introduction of organic matter imposes a limiting factor to this technology, demanding an active feeding system and additional power. Here, we demonstrated self-sustaining bioelectricity generation from a microliter-scale microbial fuel cell (MFC) by using the syntrophic interaction between heterotrophic exoelectrogenic bacteria and phototrophs. The MFC continuously generated light-responsive electricity from the heterotrophic bacterial metabolic respiration with the organic substrates produced by photosynthetic bacteria. Without additional organic fuel, the mixed culture in a 90-μL-chamber MFC generated self-sustained current for more than 13 days, while the heterotrophic culture produced current that decreased dramatically within a few hours. The current from the mixed culture was about 70 times greater than that of the device with only photosynthetic bacteria. The miniaturization provided a short start-up time, a well-controlled environment, and small internal resistance. Those advantages will become the general design platform for micropower generation.

  6. Bacteria in non-woven textile filters for domestic wastewater treatment.

    Science.gov (United States)

    Spychała, Marcin; Starzyk, Justyna

    2015-01-01

    The objective of this study was preliminary identification of heterotrophic and ammonia oxidizing bacteria (AOB) cell concentration in the cross-sectional profile of geotextile filters for wastewater treatment. Filters of thicknesses 3.6 and 7.2 mm, made of non-woven textile TS20, were supplied with septic tank effluent and intermittently dosed and filtered under hydrostatic pressure. The cumulative loads of chemical oxygen demand (COD) and total solids were about 1.36 and 1.06 kg/cm2, respectively. The filters under analysis reached a relatively high removal efficiency for organic pollution 70-90% for biochemical oxygen demand (BOD5) and 60-85% for COD. The ammonia nitrogen removal efficiency level proved to be unstable (15-55%). Biomass samples for dry mass identification were taken from two regions: continuously flooded with wastewater and intermittently flooded with wastewater. The culturable heterotrophic bacteria were determined as colony-forming units (CFUs) on microbiological-selective media by means of the plate method. AOB and nitrite oxidizing bacteria (NOB) were examined using the FISH technique. A relatively wide range of heterotrophic bacteria was observed from 7.4×10(5)/cm2 to 3.8×10(6)/cm2 in geotextile layers. The highest concentration of heterotrophic bacteria (3.8×10(6)/cm2) was observed in the first layer of the textile filter. AOB were identified occasionally--about 8-15% of all bacteria colonizing the last filter layer, but occasionally much higher concentrations and ammonia nitrogen efficiency were achieved. Bacteria oxidizing nitrite to nitrate were not observed. The relation of total and organic fraction of biomass to culturable heterotrophic bacteria was also found.

  7. Propionate oxidation by and methanol inhibition of anaerobic ammonium-oxidizing bacteria.

    Science.gov (United States)

    Güven, Didem; Dapena, Ana; Kartal, Boran; Schmid, Markus C; Maas, Bart; van de Pas-Schoonen, Katinka; Sozen, Seval; Mendez, Ramon; Op den Camp, Huub J M; Jetten, Mike S M; Strous, Marc; Schmidt, Ingo

    2005-02-01

    Anaerobic ammonium oxidation (anammox) is a recently discovered microbial pathway and a cost-effective way to remove ammonium from wastewater. Anammox bacteria have been described as obligate chemolithoautotrophs. However, many chemolithoautotrophs (i.e., nitrifiers) can use organic compounds as a supplementary carbon source. In this study, the effect of organic compounds on anammox bacteria was investigated. It was shown that alcohols inhibited anammox bacteria, while organic acids were converted by them. Methanol was the most potent inhibitor, leading to complete and irreversible loss of activity at concentrations as low as 0.5 mM. Of the organic acids acetate and propionate, propionate was consumed at a higher rate (0.8 nmol min(-1) mg of protein(-1)) by Percoll-purified anammox cells. Glucose, formate, and alanine had no effect on the anammox process. It was shown that propionate was oxidized mainly to CO(2), with nitrate and/or nitrite as the electron acceptor. The anammox bacteria carried out propionate oxidation simultaneously with anaerobic ammonium oxidation. In an anammox enrichment culture fed with propionate for 150 days, the relative amounts of anammox cells and denitrifiers did not change significantly over time, indicating that anammox bacteria could compete successfully with heterotrophic denitrifiers for propionate. In conclusion, this study shows that anammox bacteria have a more versatile metabolism than previously assumed.

  8. A further step towards tuning the properties of metal-chalcogenide nanocapsules by replacing skeletal oxide by sulphide ligands.

    Science.gov (United States)

    Schäffer, Christian; Todea, Ana Maria; Bögge, Hartmut; Floquet, Sébastien; Cadot, Emmanuel; Korenev, Vladimir S; Fedin, Vladimir P; Gouzerh, Pierre; Müller, Achim

    2013-01-14

    Addition of [Mo(2)(V)O(2)(μ-O)(μ-S)(aq)](2+) linker-type units to a solution/dynamic library containing tungstates results via the formation of the complementary pentagonal {(W)W(5)} units logically in the self-assembly of a mixed oxide/sulphide {W(VI)(72)Mo(V)(60)}-type Keplerate, thereby demonstrating the ability to tune the capsule's skeletal softness (the (μ-O)(2) and (μ-S)(2) scenarios are known) and providing options to influence differently important capsule-substrate interactions.

  9. Polyol-mediated synthesis of copper indium sulphide by solvothermal process

    International Nuclear Information System (INIS)

    Gorai, S.; Chaudhuri, S.

    2005-01-01

    A simple polyol-mediated solvothermal method has been proposed to synthesize copper indium sulphide. XRD studies reveal that the products are well crystallized. SEM indicates rod-like (with different aspect ratio) and star-shaped flake-like morphology of the products. The products are also characterized by optical studies and compositional analysis (XRF). XRF results show the formation of stoichiometric and non-stoichiometric copper indium sulphides depending on the reaction conditions

  10. Magmatic sulphides in Quaternary Ecuadorian arc magmas

    Science.gov (United States)

    Georgatou, Ariadni; Chiaradia, Massimo; Rezeau, Hervé; Wälle, Markus

    2018-01-01

    New petrographic and geochemical data on magmatic sulphide inclusions (MSIs) are presented and discussed for 15 Quaternary volcanic centers of the Ecuadorian frontal, main and back volcanic arc. MSIs occur mostly in Fe-Ti oxides (magnetite and/or magnetite-ilmenite pair) and to a lesser extent in silicate minerals (amphibole, plagioclase, and pyroxene). MSIs are present in all volcanic centers ranging in composition from basalt to dacite (SiO2 = 50-67 wt.%), indicating that sulphide saturation occurs at various stages of magmatic evolution and independently from the volcano location along the volcanic arc. MSIs also occur in dioritic, gabbroic and hornblenditic magmatic enclaves of the volcanic rocks. MSIs display variable sizes (1-30 μm) and shapes (globular, ellipsoidal, angular, irregular) and occur mostly as polymineralic inclusions composed of Fe-rich and Cu-poor (pyrrhotite) and Cu-rich (mostly chalcopyrite) phases. Aerial sulphide relative abundances range from 0.3 to 7 ppm in volcanic host rocks and from 13 to 24 ppm in magmatic enclaves. Electron microprobe analyses of MSIs indicate maximum metal contents of Cu = 65.7 wt.%, Fe = 65.2 wt.%, Ni = 10.1 wt.% for those hosted in the volcanic rocks and of Cu = 57.7 wt.%, Fe = 60.9 wt.%, Ni = 5.1 wt.%, for those hosted in magmatic enclaves. Relationships of the sulphide chemistry to the host whole rock chemistry show that with magmatic differentiation (e.g., increasing SiO2) the Cu and Ni content of sulphides decrease whereas the Fe and S contents increase. The opposite behavior is observed with the increase of Cu in the whole rock, because the latter is anti-correlated with the SiO2 whole rock content. Laser ablation ICP-MS analyses of MSIs returned maximum values of PGEs and noble metals of Pd = 30 ppm, Rh = 8.1 ppm, Ag = 92.8 ppm and Au = 0.6 ppm and Pd = 43 ppm, Rh = 22.6 ppm, Ag = 89 ppm and Au = 1 ppm for those hosted in volcanic rocks and magmatic enclaves, respectively. These PGE contents display a

  11. Surface Analysis of Marine Sulphate-Reducing Bacteria Exo polymers on Steel During Bio corrosion Using X-ray Photoelectron Spectroscopy

    International Nuclear Information System (INIS)

    Fathul Karim Sahrani; Madzlan Abd. Aziz; Zaharah Ibrahim; Adibah Yahya

    2008-01-01

    The aim of this study was to determine the surface chemistry during bio corrosion process on growth and on the production of exo polymeric substances (EPS) in batch cultures of mix-strains of marine sulphate-reducing bacteria (SRB) isolated from Malaysian Shipyard and Engineering Harbours, Pasir Gudang. The EPS and precipitates were analyzed by x-ray photoelectron spectroscopy (XPS). The XPS results indicate that Fe(2p 3/2 ) spectrum for iron sulphide can be fitted with Fe(II) and Fe(III) components, both corresponding to Fe-S bond types. The absence of oxide oxygen in the O(1s) spectrum and Fe(III)-O bond types in the Fe(2p 3/2 ) spectrum supports the conclusion that iron sulphides are composed of both ferric and ferrous iron coordinated with mono sulphide and disulphide. (author)

  12. Removal of Anabaena spiroides by potassium permanganate pre-oxidation: effect on photosynthetic capacity and molecular weight distribution.

    Science.gov (United States)

    Qiao, Junlian; Zhang, Xiaodong; Lv, Liping

    2017-11-01

    Bench scale tests were conducted to investigate the effect of potassium permanganate pre-oxidation on the photosynthetic activity and molecular weight distribution of Anabaena spiroides. Different concentrations of potassium permanganate were added into the suspension of Anabaena spiroides, one of the dominant algae in water bloom, and after pre-oxidation of permanganate for 1 h, the results show that the removal rate significantly increases by 33.99~36.35% compared to direct coagulation. Then, the algal characteristics, including photosynthetic ability, the changes in extracellular organic matter three-dimensional fluorescence, and the distribution of molecular weight were conducted and the results show that along with increasing concentration of potassium permanganate, the photosynthetic ability of algae decreases, more extracellular organic matter is secreted, and large molecular weight matter (humic-like and fulvic-like substances) are generated. Therefore, this study demonstrates that potassium permanganate could be used in addressing the algae-rich water.

  13. Immobilization of ammonia-oxidizing bacteria by polyvinyl alcohol and sodium alginate.

    Science.gov (United States)

    Dong, Yuwei; Zhang, Yanqiu; Tu, Baojun

    Ammonia-oxidizing bacteria were immobilized by polyvinyl alcohol (PVA) and sodium alginate. The immobilization conditions and ammonia oxidation ability of the immobilized bacteria were investigated. The following immobilization conditions were observed to be optimal: PVA, 12%; sodium alginate, 1.1%; calcium chloride, 1.0%; inoculum concentration, 1.3 immobilized balls/mL of immobilized medium; pH, 10; and temperature, 30°C. The immobilized ammonia-oxidizing bacteria exhibited strong ammonia oxidation ability even after being recycled four times. The ammonia nitrogen removal rate of the immobilized ammonia-oxidizing bacteria reached 90.30% under the optimal immobilization conditions. When compared with ammonia-oxidizing bacteria immobilized by sodium alginate alone, the bacteria immobilized by PVA and sodium alginate were superior with respect to pH resistance, the number of reuses, material cost, heat resistance, and ammonia oxidation ability. Copyright © 2017 Sociedade Brasileira de Microbiologia. Published by Elsevier Editora Ltda. All rights reserved.

  14. The rapid size- and shape-controlled continuous hydrothermal synthesis of metal sulphide nanomaterials

    OpenAIRE

    Dunne, Peter W.; Starkey, Christopher L.; Gimeno-Fabra, Miquel; Lester, Edward

    2014-01-01

    Continuous flow hydrothermal synthesis offers a cheap, green and highly scalable route for the preparation of inorganic nanomaterials which has predominantly been applied to metal oxide based materials. In this work we report the first continuous flow hydrothermal synthesis of metal sulphide nanomaterials. A wide range of binary metal sulphides, ZnS, CdS, PbS, CuS, Fe₍₁₋ᵪ₎S and Bi₂S₃, have been synthesised. By varying the reaction conditions two different mechanisms may be invoked; a growth d...

  15. Halophilic and haloalkaliphilic sulfur-oxidizing bacteria

    NARCIS (Netherlands)

    Sorokin, D.Y.; Banciu, H.; Robertson, L.A.; Kuenen, J.G.; Muntyan, M.S.; Muyzer, G.; Rosenberg, E.; DeLong, F.; Delong, E.; Lory, S.; Stackebrandt, E.; Thompson, F.

    2013-01-01

    Chemotrophic sulfur-oxidizing bacteria (SOB) represent an important functional group of microorganisms responsible for the dark oxidation of reduced sulfur compounds generated by sulfidogens. Until recently, only a single genus of halophilic SOB (Halothiobacillus) has been described, and nothing was

  16. Sulphide production and corrosion in seawaters during exposure to FAME diesel.

    Science.gov (United States)

    Lee, Jason S; Ray, Richard I; Little, Brenda J; Duncan, Kathleen E; Oldham, Athenia L; Davidova, Irene A; Suflita, Joseph M

    2012-01-01

    Experiments were designed to evaluate the corrosion-related consequences of storing/transporting fatty acid methyl ester (FAME) alternative diesel fuel in contact with natural seawater. Coastal Key West, FL (KW), and Persian Gulf (PG) seawaters, representing an oligotrophic and a more organic- and inorganic mineral-rich environment, respectively, were used in 60 day incubations with unprotected carbon steel. The original microflora of the two seawaters were similar with respect to major taxonomic groups but with markedly different species. After exposure to FAME diesel, the microflora of the waters changed substantially, with Clostridiales (Firmicutes) becoming dominant in both. Despite low numbers of sulphate-reducing bacteria in the original waters and after FAME diesel exposure, sulphide levels and corrosion increased markedly due to microbial sulphide production. Corrosion morphology was in the form of isolated pits surrounded by an intact, passive surface with the deepest pits associated with the fuel/seawater interface in the KW exposure. In the presence of FAME diesel, the highest corrosion rates measured by linear polarization occurred in the KW exposure correlating with significantly higher concentrations of sulphur and chlorine (presumed sulphide and chloride, respectively) in the corrosion products.

  17. Experimental observation of zinc dialkyl dithiophosphate (ZDDP)-induced iron sulphide formation

    Energy Technology Data Exchange (ETDEWEB)

    Soltanahmadi, Siavash, E-mail: s.soltanahmadi@leeds.ac.uk [Institute of Functional Surfaces, School of Mechanical Engineering, University of Leeds, LS2 9JT (United Kingdom); Morina, Ardian [Institute of Functional Surfaces, School of Mechanical Engineering, University of Leeds, LS2 9JT (United Kingdom); Eijk, Marcel C.P. van; Nedelcu, Ileana [SKF Engineering and Research Centre, 3430 DT Nieuwegein (Netherlands); Neville, Anne [Institute of Functional Surfaces, School of Mechanical Engineering, University of Leeds, LS2 9JT (United Kingdom)

    2017-08-31

    Graphical abstract: Chemical analysis of ZDDP-induced tribofilm under severe boundary lubricated regime in nano and micro-meter scales.▪ - Highlights: • A ZDDP-derived locally formed iron-sulphide layer is detected on the steel surface. • The iron-sulphide is a 5–10 nm thin distinct layer at steel-phosphate interface. • Near the surface-crack site the elemental distribution of the tribofilm is altered. • Sulphur concentration is enhanced in the iron-sulphide layer near the cracked-site. • ZDDP elements are detected inside the crack with a greater contribution of sulphur. - Abstract: Zinc dialkyl dithiophosphate (ZDDP) as a well-known anti-wear additive enhances the performance of the lubricant beyond its wear-protection action, through its anti-oxidant and Extreme Pressure (EP) functionality. In spite of over thirty years of research attempting to reveal the mechanism of action of ZDDP, there are still some uncertainties around the exact mechanisms of its action. This is especially the case with the role of sulphide layer formed in the tribofilm and its impact on surface fatigue. Although iron sulphide on the substrate is hypothesised in literature to form as a separate layer, there has been no concrete experimental observation on the distribution of the iron sulphide as a dispersed precipitate, distinct layer at the steel substrate or both. It remains to be clarified whether the iron sulphide layer homogeneously covers the surface or locally forms at the surface. In the current study a cross section of the specimen after experiment was prepared and has been investigated with Transmission Electron Microscopy (TEM) and Energy-Dispersive X-ray (EDX) elemental analysis. A 5–10 nm iron sulphide layer is visualised on the interface as a separate layer underneath the phosphate layer with an altered distribution of tribofilm elements near the crack site. The iron sulphide interface layer is more visible near the crack site where the concentration of the

  18. Experimental observation of zinc dialkyl dithiophosphate (ZDDP)-induced iron sulphide formation

    International Nuclear Information System (INIS)

    Soltanahmadi, Siavash; Morina, Ardian; Eijk, Marcel C.P. van; Nedelcu, Ileana; Neville, Anne

    2017-01-01

    Graphical abstract: Chemical analysis of ZDDP-induced tribofilm under severe boundary lubricated regime in nano and micro-meter scales.▪ - Highlights: • A ZDDP-derived locally formed iron-sulphide layer is detected on the steel surface. • The iron-sulphide is a 5–10 nm thin distinct layer at steel-phosphate interface. • Near the surface-crack site the elemental distribution of the tribofilm is altered. • Sulphur concentration is enhanced in the iron-sulphide layer near the cracked-site. • ZDDP elements are detected inside the crack with a greater contribution of sulphur. - Abstract: Zinc dialkyl dithiophosphate (ZDDP) as a well-known anti-wear additive enhances the performance of the lubricant beyond its wear-protection action, through its anti-oxidant and Extreme Pressure (EP) functionality. In spite of over thirty years of research attempting to reveal the mechanism of action of ZDDP, there are still some uncertainties around the exact mechanisms of its action. This is especially the case with the role of sulphide layer formed in the tribofilm and its impact on surface fatigue. Although iron sulphide on the substrate is hypothesised in literature to form as a separate layer, there has been no concrete experimental observation on the distribution of the iron sulphide as a dispersed precipitate, distinct layer at the steel substrate or both. It remains to be clarified whether the iron sulphide layer homogeneously covers the surface or locally forms at the surface. In the current study a cross section of the specimen after experiment was prepared and has been investigated with Transmission Electron Microscopy (TEM) and Energy-Dispersive X-ray (EDX) elemental analysis. A 5–10 nm iron sulphide layer is visualised on the interface as a separate layer underneath the phosphate layer with an altered distribution of tribofilm elements near the crack site. The iron sulphide interface layer is more visible near the crack site where the concentration of the

  19. [Effects of transgenic Bt + CpTI cotton on rhizosphere bacteria and ammonia oxidizing bacteria population].

    Science.gov (United States)

    Dong, Lianhua; Meng, Ying; Wang, Jing

    2014-03-04

    The effect of transgenic cotton on the rhizosphere bacteria can be important to the risk assessment for the genetically modified crops. We studied the rhizosphere microbial community with cultivating genetically modified cotton. The effects of transgenic Bt + CpTI Cotton (SGK321) and its receptor cotton (SY321) on rhizosphere total bacteria and ammonia oxidizing bacteria population size were studied by using droplet digital PCR. We collected rhizosphere soil before cotton planting and along with the cotton growth stage (squaring stage, flowering stage, belling stage and boll opening stage). There was no significant change on the total bacterial population between the transgenic cotton and the receptor cotton along with the growth stage. However, the abundance of ammonia oxidizing bacteria (AOB) in both type of cottons showed significant difference between different growth stages, and the variation tendency was different. In squaring stage, the numbers of AOB in rhizosphere of SY321 and SGK321 increased 4 and 2 times, respectively. In flowering stage, AOB number in rhizosphere of SY321 significantly decreased to be 5.96 x 10(5) copies/g dry soil, however, that of SGK321 increased to be 1.25 x 10(6) copies/g dry soil. In belling stage, AOB number of SY321 greatly increased to be 1.49 x 10(6) copies/g dry soil, but no significant change was observed for AOB number of SGK321. In boll opening stage, both AOB number of SY321 and SGK321 clearly decreased and they were significantly different from each other. Compared to the non-genetically modified cotton, the change in abundance of ammonia oxidizing bacteria was slightly smooth in the transgenic cotton. Not only the cotton growth stage but also the cotton type caused this difference. The transgenic cotton can slow down the speed of ammonia transformation through impacting the number of AOB, which is advantageous for plant growth.

  20. Enhanced protection of PDMS-embedded palladium catalysts by co-embedding of sulphide-scavengers.

    Science.gov (United States)

    Comandella, Daniele; Ahn, Min Hyung; Kim, Hojeong; Mackenzie, Katrin

    2017-12-01

    For Pd-containing hydrodechlorination catalysts, coating with poly(dimethyl siloxane) (PDMS) was proposed earlier as promising protection scheme against poisoning. The PDMS coating can effectively repel non-permeating poisons (such as SO 3 2- ) retaining the hydrodechlorination Pd activity. In the present study, the previously achieved protection efficiency was enhanced by incorporation of sulphide scavengers into the polymer. The embedded scavengers were able to bind permeating non-ionic poisons (such as H 2 S) during their passage through PDMS prior to Pd contact which ensured an extended catalyst lifetime. Three scavenger types forming non-permeable sulphur species from H 2 S - alkaline, oxidative or iron-based compounds - were either incorporated into single-layer coats around individual Pd/Al 2 O 3 particles or into a second layer above Pd-containing PDMS films (Pd-PDMS). Hydrodechlorination and hydrogenation were chosen as model reactions, carried out in batch and continuous-flow reactors. Batch tests with all scavenger-containing catalysts showed extended Pd protection compared to scavenger-free catalysts. Solid alkaline compounds (Ca(OH) 2 , NaOH, CaO) and MnO 2 showed the highest instantaneous scavenger efficiencies (retained Pd activity=30-60%), while iron-based catalysts, such as nano zero-valent iron (nZVI) or ferrocene (FeCp 2 ), proved less efficient (1-10%). When stepwise poisoning was applied, the protection efficiency of iron-based and oxidizing compounds was higher in the long term than that of alkaline solids. Long-term experiments in mixed-flow reactors were performed with selected scavengers, revealing the following trend of protection efficiency: CaO 2 >Ca(OH) 2 >FeCp 2 . Under field-simulating conditions using a fixed-bed reactor, the combination of sulphide pre-oxidation in the water phase by H 2 O 2 and local scavenger-enhanced Pd protection was successful. The oxidizing agent H 2 O 2 does not disturb the Pd-catalysed reduction, while the

  1. Analytical protocols for the determination of sulphur compounds characteristic of the metabolism of Chlorobium limicola

    Directory of Open Access Journals (Sweden)

    A. Aliboni

    2015-09-01

    Full Text Available Chlorobium limicola belongs to the green sulphur bacteria that has a potential for technological applications such as biogas clean up oxidising hydrogen sulphide to elemental sulphur through photosynthetic process. In the present work, analytical methods are described for the determination of different sulphur species in C. limicola cultures – sulphide by GC-FPD, sulphate by ionic HPLC and elemental sulphur by RP HPLC. The latter method eliminates the need for chloroform extraction of water suspensions of elemental sulphur. Data from sulphide and elemental sulphur analyses have been compared with ones coming from more traditional analytical methodologies.

  2. Beijerinckia derxii stimulates the viability of non-N2-fixing bacteria in nitrogen-free media

    Directory of Open Access Journals (Sweden)

    Barbosa Heloiza R.

    2000-01-01

    Full Text Available The interactions between the nitrogen-fixing microorganism Beijerinckia derxii with two non-diazotrophic bacteria, either Escherichia coli or a facultative sulphur-oxidizing chemolitotroph, were studied in mixed cultures. Direct and indirect contact between B. derxii and E. coli were tested. B. derxii increased CFU numbers and/or maintained the viability of the non-diazotrophic bacteria, but neither growth nor nitrogenase activity of the nitrogen-fixing bacterium were affected by either partner.

  3. On presolar meteoritic sulphides

    International Nuclear Information System (INIS)

    Clayton, D.D.; Ramadurai, S.

    1977-01-01

    It is stated that discoveries of isotopic anomalies in meteorites caused some workers to postulate nucleosynthetic inhomogeneities that were somehow carried into the early solar system. A picture was developed treating most anomalies as extinct radioactivities trapped in mineral condensations in the expanding sites of explosive nucleosynthesis, such as supernovae or novae. As evidence for this grows it becomes clear that not only isotopic but also mineralogical evidence of presolar grains is wanted, and also knowledge of what supernovae condensates are likely to survive. It is suggested here that a search should be made among sulphides in meteorites, searching especially for sulphides of Ti. The reasoning is that many sulphides, especially Ti sulphides, will not be expected in solar condensation sequences, but are expected to dominate certain key zones of supernovae expansion. Sulphur seems to have resulted primarily from the nuclear explosions of O and Si, and arguments leading to that conclusion are analysed. It is thought that the discussion could lead to important discoveries for nucleosynthesis and the origin of the solar system. (U.K.)

  4. The photosynthetic bacteria Rhodobacter capsulatus and Synechocystis sp. PCC 6803 as new hosts for cyclic plant triterpene biosynthesis.

    Directory of Open Access Journals (Sweden)

    Anita Loeschcke

    Full Text Available Cyclic triterpenes constitute one of the most diverse groups of plant natural products. Besides the intriguing biochemistry of their biosynthetic pathways, plant triterpenes exhibit versatile bioactivities, including antimicrobial effects against plant and human pathogens. While prokaryotes have been extensively used for the heterologous production of other classes of terpenes, the synthesis of cyclic triterpenes, which inherently includes the two-step catalytic formation of the universal linear precursor 2,3-oxidosqualene, is still a major challenge. We thus explored the suitability of the metabolically versatile photosynthetic α-proteobacterium Rhodobacter capsulatus SB1003 and cyanobacterium Synechocystis sp. PCC 6803 as alternative hosts for biosynthesis of cyclic plant triterpenes. Therefore, 2,3-oxidosqualene production was implemented and subsequently combined with different cyclization reactions catalyzed by the representative oxidosqualene cyclases CAS1 (cycloartenol synthase, LUP1 (lupeol synthase, THAS1 (thalianol synthase and MRN1 (marneral synthase derived from model plant Arabidopsis thaliana. While successful accumulation of 2,3-oxidosqualene could be detected by LC-MS analysis in both hosts, cyclase expression resulted in differential production profiles. CAS1 catalyzed conversion to only cycloartenol, but expression of LUP1 yielded lupeol and a triterpenoid matching an oxidation product of lupeol, in both hosts. In contrast, THAS1 expression did not lead to cyclic product formation in either host, whereas MRN1-dependent production of marnerol and hydroxymarnerol was observed in Synechocystis but not in R. capsulatus. Our findings thus indicate that 2,3-oxidosqualene cyclization in heterologous phototrophic bacteria is basically feasible but efficient conversion depends on both the respective cyclase enzyme and individual host properties. Therefore, photosynthetic α-proteo- and cyanobacteria are promising alternative candidates

  5. Overexpression of plastidial thioredoxins f and m differentially alters photosynthetic activity and response to oxidative stress in tobacco plants

    Directory of Open Access Journals (Sweden)

    Pascal eREY

    2013-10-01

    Full Text Available Plants display a remarkable diversity of thioredoxins (Trxs, reductases controlling the thiol redox status of proteins. The physiological function of many of them remains elusive, particularly for plastidial Trxs f and m, which are presumed based on biochemical data to regulate photosynthetic reactions and carbon metabolism. Recent reports revealed that Trxs f and m participate in vivo in the control of starch metabolism and cyclic photosynthetic electron transfer around photosystem I, respectively. To further delineate their in planta function, we compared the photosynthetic characteristics, the level and/or activity of various Trx targets and the responses to oxidative stress in transplastomic tobacco plants overexpressing either Trx f or Trx m. We found that plants overexpressing Trx m specifically exhibit altered growth, reduced chlorophyll content, impaired photosynthetic linear electron transfer and decreased pools of glutathione and ascorbate. In both transplastomic lines, activities of two enzymes involved in carbon metabolism, NADP-malate dehydrogenase and NADP-glyceraldehyde-3-phosphate dehydrogenase are markedly and similarly altered. In contrast, plants overexpressing Trx m specifically display increased capacity for methionine sulfoxide reductases, enzymes repairing damaged proteins by regenerating methionine from oxidized methionine. Finally, we also observed that transplastomic plants exhibit distinct responses when exposed to oxidative stress conditions generated by methyl viologen or exposure to high light combined with low temperature, the plants overexpressing Trx m being notably more tolerant than Wt and those overexpressing Trx f. Altogether, these data indicate that Trxs f and m fulfill distinct physiological functions. They prompt us to propose that the m type is involved in key processes linking photosynthetic activity, redox homeostasis and antioxidant mechanisms in the chloroplast.

  6. Exploring photosynthesis evolution by comparative analysis of metabolic networks between chloroplasts and photosynthetic bacteria

    Directory of Open Access Journals (Sweden)

    Hou Jing

    2006-04-01

    findings are consistent with the notion that since the light energy absorption, transfer and conversion is highly efficient even in photosynthetic bacteria, the further improvements in photosynthetic efficiency in higher plants may rely on changes in metabolic network properties.

  7. Efeito da aplicação de nitrato na redução biogênica de sulfeto sob diferentes concentrações iniciais de bactérias redutoras de nitrato e sulfato Effect of nitrate application on reduction of biogenic sulphide under different initial concentrations of nitrate and sulphate-reducing bacteria

    Directory of Open Access Journals (Sweden)

    Kally Alves de Sousa

    2010-01-01

    Full Text Available The effect of sodium nitrate application in the reduction of biogenic sulphide was evaluated through a 2k complete factorial design, using as variable response the production of sulfide at intervals of incubation of 7, 14 and 28 days. The most effective condition for reducing the sulphide production (final concentrations from 0.4 to 1.6 mg S2- L-1 was obtained with an initial population of sulphate-reducing bacteria and nitrate-reducing bacteria of 10(4 MPN mL-1 and 427.5 mg L-1 nitrate. The results also suggested that the applications of nitrate to control the process of souring should follow a continuous scheme.

  8. Identification of a fourth family of lycopene cyclases in photosynthetic bacteria.

    Science.gov (United States)

    Maresca, Julia A; Graham, Joel E; Wu, Martin; Eisen, Jonathan A; Bryant, Donald A

    2007-07-10

    A fourth and large family of lycopene cyclases was identified in photosynthetic prokaryotes. The first member of this family, encoded by the cruA gene of the green sulfur bacterium Chlorobium tepidum, was identified in a complementation assay with a lycopene-producing strain of Escherichia coli. Orthologs of cruA are found in all available green sulfur bacterial genomes and in all cyanobacterial genomes that lack genes encoding CrtL- or CrtY-type lycopene cyclases. The cyanobacterium Synechococcus sp. PCC 7002 has two homologs of CruA, denoted CruA and CruP, and both were shown to have lycopene cyclase activity. Although all characterized lycopene cyclases in plants are CrtL-type proteins, genes orthologous to cruP also occur in plant genomes. The CruA- and CruP-type carotenoid cyclases are members of the FixC dehydrogenase superfamily and are distantly related to CrtL- and CrtY-type lycopene cyclases. Identification of these cyclases fills a major gap in the carotenoid biosynthetic pathways of green sulfur bacteria and cyanobacteria.

  9. Innovative Approaches Using Lichen Enriched Media to Improve Isolation and Culturability of Lichen Associated Bacteria

    Science.gov (United States)

    Biosca, Elena G.; Flores, Raquel; Santander, Ricardo D.; Díez-Gil, José Luis; Barreno, Eva

    2016-01-01

    Lichens, self-supporting mutualistic associations between a fungal partner and one or more photosynthetic partners, also harbor non-photosynthetic bacteria. The diversity and contribution of these bacteria to the functioning of lichen symbiosis have recently begun to be studied, often by culture-independent techniques due to difficulties in their isolation and culture. However, culturing as yet unculturable lichenic bacteria is critical to unravel their potential functional roles in lichen symbiogenesis, to explore and exploit their biotechnological potential and for the description of new taxa. Our objective was to improve the recovery of lichen associated bacteria by developing novel isolation and culture approaches, initially using the lichen Pseudevernia furfuracea. We evaluated the effect of newly developed media enriched with novel lichen extracts, as well as the influence of thalli washing time and different disinfection and processing protocols of thalli. The developed methodology included: i) the use of lichen enriched media to mimic lichen nutrients, supplemented with the fungicide natamycin; ii) an extended washing of thalli to increase the recovery of ectolichenic bacteria, thus allowing the disinfection of thalli to be discarded, hence enhancing endolichenic bacteria recovery; and iii) the use of an antioxidant buffer to prevent or reduce oxidative stress during thalli disruption. The optimized methodology allowed significant increases in the number and diversity of culturable bacteria associated with P. furfuracea, and it was also successfully applied to the lichens Ramalina farinacea and Parmotrema pseudotinctorum. Furthermore, we provide, for the first time, data on the abundance of culturable ecto- and endolichenic bacteria that naturally colonize P. furfuracea, R. farinacea and P. pseudotinctorum, some of which were only able to grow on lichen enriched media. This innovative methodology is also applicable to other microorganisms inhabiting these

  10. Innovative Approaches Using Lichen Enriched Media to Improve Isolation and Culturability of Lichen Associated Bacteria.

    Science.gov (United States)

    Biosca, Elena G; Flores, Raquel; Santander, Ricardo D; Díez-Gil, José Luis; Barreno, Eva

    2016-01-01

    Lichens, self-supporting mutualistic associations between a fungal partner and one or more photosynthetic partners, also harbor non-photosynthetic bacteria. The diversity and contribution of these bacteria to the functioning of lichen symbiosis have recently begun to be studied, often by culture-independent techniques due to difficulties in their isolation and culture. However, culturing as yet unculturable lichenic bacteria is critical to unravel their potential functional roles in lichen symbiogenesis, to explore and exploit their biotechnological potential and for the description of new taxa. Our objective was to improve the recovery of lichen associated bacteria by developing novel isolation and culture approaches, initially using the lichen Pseudevernia furfuracea. We evaluated the effect of newly developed media enriched with novel lichen extracts, as well as the influence of thalli washing time and different disinfection and processing protocols of thalli. The developed methodology included: i) the use of lichen enriched media to mimic lichen nutrients, supplemented with the fungicide natamycin; ii) an extended washing of thalli to increase the recovery of ectolichenic bacteria, thus allowing the disinfection of thalli to be discarded, hence enhancing endolichenic bacteria recovery; and iii) the use of an antioxidant buffer to prevent or reduce oxidative stress during thalli disruption. The optimized methodology allowed significant increases in the number and diversity of culturable bacteria associated with P. furfuracea, and it was also successfully applied to the lichens Ramalina farinacea and Parmotrema pseudotinctorum. Furthermore, we provide, for the first time, data on the abundance of culturable ecto- and endolichenic bacteria that naturally colonize P. furfuracea, R. farinacea and P. pseudotinctorum, some of which were only able to grow on lichen enriched media. This innovative methodology is also applicable to other microorganisms inhabiting these

  11. Enhancing protein to extremely high content in photosynthetic bacteria during biogas slurry treatment.

    Science.gov (United States)

    Yang, Anqi; Zhang, Guangming; Meng, Fan; Lu, Pei; Wang, Xintian; Peng, Meng

    2017-12-01

    This work proposed a novel approach to achieve an extremely high protein content in photosynthetic bacteria (PSB) using biogas slurry as a culturing medium. The results showed the protein content of PSB could be enhanced strongly to 90% in the biogas slurry, which was much higher than reported microbial protein contents. The slurry was partially purified at the same time. Dark-aerobic was more beneficial than light-anaerobic condition for protein accumulation. High salinity and high ammonia of the biogas slurry were the main causes for protein enhancement. In addition, the biogas slurry provided a good buffer system for PSB to grow. The biosynthesis mechanism of protein in PSB was explored according to theoretical analysis. During biogas slurry treatment, the activities of glutamate synthase and glutamine synthetase were increased by 26.55%, 46.95% respectively. Copyright © 2017 Elsevier Ltd. All rights reserved.

  12. Biomass and pigments production in photosynthetic bacteria wastewater treatment: Effects of photoperiod.

    Science.gov (United States)

    Zhou, Qin; Zhang, Panyue; Zhang, Guangming; Peng, Meng

    2015-08-01

    This study aimed at enhancing the bacterial biomass and pigments production in together with pollution removal in photosynthetic bacteria (PSB) wastewater treatment via using different photoperiods. Different light/dark cycles and light/dark cycle frequencies were examined. Results showed that PSB had the highest biomass production, COD removal and biomass yield, and light energy efficiency with light/dark cycle of 2h/1h. The corresponding biomass, COD removal and biomass yield reached 2068mg/L, 90.3%, and 0.38mg-biomass/mg-COD-removal, respectively. PSB showed higher biomass production and biomass yield with higher light/dark cycle frequency. Mechanism analysis showed within a light/dark cycle from 1h/2h to 2h/1h, the carotenoid and bacteriochlorophyll production increased with an increase in light/dark cycle. Moreover, the pigment contents were much higher with lower frequency of 2-4 times/d. Copyright © 2015 Elsevier Ltd. All rights reserved.

  13. Anoxic oscillating MBR for photosynthetic bacteria harvesting and high salinity wastewater treatment.

    Science.gov (United States)

    Qin, Lei; Liu, Qiuhua; Meng, Qin; Fan, Zheng; He, Jinzhe; Liu, Tao; Shen, Chong; Zhang, Guoliang

    2017-01-01

    In this study, photosynthetic bacteria (PSB) were first harvested by MBR with pendulum type oscillation (PTO) hollow fiber module in succession and on a large scale. Based on unique properties of PSB, PSB/MBR was successfully applied for high-salinity wastewater treatment. Compared with control PSB-MBR (CMBR), PSB/PTO-MBR exhibited more excellent organics removal, which was mainly attributed to much higher biomass production for utilization. Meanwhile, the influence of light irradiation and aeration on activity of PSB was investigated in detail. Results showed that PTO-MBR with 12h light irradiation proved to be a promising and economical alternative. The cycle of dark/light and anoxic had a positive effect on PSB cultivating. Moreover, PTO-MBR exhibited much higher flux than CMBR even if large amounts of biomass existed, which demonstrated that the strong shear stress on interface of liquid-membrane played important roles on membrane fouling reduction. Copyright © 2016 Elsevier Ltd. All rights reserved.

  14. Cultivation, detection, and ecophysiology of anaerobic ammonium-oxidizing bacteria.

    Science.gov (United States)

    Kartal, Boran; Geerts, Wim; Jetten, Mike S M

    2011-01-01

    Anaerobic ammonium-oxidizing (anammox) bacteria oxidize ammonium with nitrite under anoxic conditions. The anammox process is currently used to remove ammonium from wastewater and contributes significantly to the loss of fixed nitrogen from the oceans. In this chapter, we focus on the ecophysiology of anammox bacteria and describe new methodologies to grow these microorganisms. Now, it is possible to enrich anammox bacteria up to 95% with a membrane bioreactor that removes forces of selection for fast settling aggregates and facilitates the growth of planktonic cells. The biomass from this system has a high anaerobic ammonium oxidation rate (50 fmol NH(4)(+) · cell(-1) day(-1)) and is suitable for many ecophysiological and molecular experiments. A high throughput Percoll density gradient centrifugation protocol may be applied on this biomass for further enrichment (>99.5%) of anammox bacteria. Furthermore, we provide an up-to-date list of commonly used primers and introduce protocols for quantification and detection of functional genes of anammox bacteria in their natural environment. Copyright © 2011 Elsevier Inc. All rights reserved.

  15. Biogenic catalysis in sulphide minerals' weathering processes and acid mine drainage genesis.

    Science.gov (United States)

    Kušnierová, Mária; Praščáková, Mária; Nowak, Anna K; Gorazda, Katarzyna; Wzorek, Zbigniew

    2014-01-01

    Bioleaching and biogenesis are the main outputs from a large group of environmental processes participating in the natural material cycle, used in raw materials processing. Bio-oxidation reactions are the main basis for bioleaching procedures, often participating in parallel leaching processes. During the leaching processes of polycomponent sulphide substrates, the factor of process selection also plays an important role, being in direct relation to the electric properties and galvanic effect occurring between the individual components of the leaching substrate. This work gives a summary of the results of a research focused on the possibilities of using biotechnological procedures for treatment of Slovak sulphide ores. The object of the research is extraction of valuable metals, undesirable admixtures and degradation of crystal lattice of sulphides for subsequent chemical leaching processing of precious metals. The results of experiments on the existence of biogenic processes in situ on waste dumps from exploitation containing residual sulphides are also presented. The processes result in acid mine drainage water generation. These waters are strongly mineralised (over 48 g/L) and of low pH; that is why they are very caustic. The arsenic content (2.558 mg/L) in outflowing waters from old mines is high and over the limits set by the law.

  16. Biochemistry, proteomics and phosphoproteomics of plant mitochondria from non-photosynthetic cells

    Directory of Open Access Journals (Sweden)

    Jesper Foged Havelund

    2013-03-01

    Full Text Available Mitochondria fulfill some basic roles in all plant cells. They supply the cell with energy in the form of ATP and reducing equivalents (NAD(PH and they provide the cell with intermediates for a range of biosynthetic pathways. In addition to this, mitochondria contribute to a number of specialized functions depending on the tissue and cell type, as well as environmental conditions. We will here review the biochemistry and proteomics of mitochondria from non-green cells and organs, which differ from those of photosynthetic organs in a number of respects. We will briefly cover purification of mitochondria and general biochemical properties such as oxidative phosphorylation. We will then mention a few adaptive properties in response to water stress, seed maturation and germination and the ability to function under hypoxic conditions. The discussion will mainly focus on Arabidopsis cell cultures, etiolated germinating rice seedlings and potato tubers as model plants. It will cover the general proteome as well as the posttranslational modification protein phosphorylation. To date 64 phosphorylated mitochondrial proteins with a total of 103 phosphorylation sites have been identified.

  17. Nitrous oxide production by lithotrophic ammonia-oxidizing bacteria and implications for engineered nitrogen-removal systems.

    Science.gov (United States)

    Chandran, Kartik; Stein, Lisa Y; Klotz, Martin G; van Loosdrecht, Mark C M

    2011-12-01

    Chemolithoautotrophic AOB (ammonia-oxidizing bacteria) form a crucial component in microbial nitrogen cycling in both natural and engineered systems. Under specific conditions, including transitions from anoxic to oxic conditions and/or excessive ammonia loading, and the presence of high nitrite (NO₂⁻) concentrations, these bacteria are also documented to produce nitric oxide (NO) and nitrous oxide (N₂O) gases. Essentially, ammonia oxidation in the presence of non-limiting substrate concentrations (ammonia and O₂) is associated with N₂O production. An exceptional scenario that leads to such conditions is the periodical switch between anoxic and oxic conditions, which is rather common in engineered nitrogen-removal systems. In particular, the recovery from, rather than imposition of, anoxic conditions has been demonstrated to result in N₂O production. However, applied engineering perspectives, so far, have largely ignored the contribution of nitrification to N₂O emissions in greenhouse gas inventories from wastewater-treatment plants. Recent field-scale measurements have revealed that nitrification-related N₂O emissions are generally far higher than emissions assigned to heterotrophic denitrification. In the present paper, the metabolic pathways, which could potentially contribute to NO and N₂O production by AOB have been conceptually reconstructed under conditions especially relevant to engineered nitrogen-removal systems. Taken together, the reconstructed pathways, field- and laboratory-scale results suggest that engineering designs that achieve low effluent aqueous nitrogen concentrations also minimize gaseous nitrogen emissions.

  18. Field testing of sulphide electrodes

    International Nuclear Information System (INIS)

    Singh, P.R.; Gaonkar, K.B.; Gadiyar, H.S.

    1993-01-01

    Sulphide ion selective electrodes have been developed at BARC, for determination of Ag + and S - ions directly and Cl - and CN - ions indirectly. The electrodes were tested for their use in sulphide environments in the EAD (Effluent After Dilution) stream at the Heavy Water Plant, Kota. The electrodes are suitable in the concentration range of 16000 ppm to 0.002 ppm, with a slope of 29-31 mV per decade change in the sulphide ion concentration. The response time is less than 10 seconds. These electrodes are reliable for continuous on-line use for a long period. (author). 7 refs., 11 figs., 1 tab

  19. Counting viruses and bacteria in photosynthetic microbial mats

    NARCIS (Netherlands)

    Carreira, C; Staal, M.; Middelboe, M.; Brussaard, C.P.D.

    2015-01-01

    Viral abundances in benthic environments are the highest found in aquatic systems. Photosynthetic microbial mats represent benthic environments with high microbial activity and possibly high viral densities, yet viral abundances have not been examined in such systems. Existing extraction procedures

  20. Corrosion of low alloy steels in natural seawater. Influence of alloying elements and bacteria

    International Nuclear Information System (INIS)

    Dajoux Malard, Emilie

    2006-01-01

    Metallic infrastructures immersed in natural seawater are exposed to important corrosion phenomena, sometimes characterised as microbiologically influenced corrosion. The presence of alloying elements in low alloy steels could present a corrosion resistance improvement of the structures. In this context, tests are performed with commercial steel grades, from 0,05 wt pc Cr to 11,5 wt pc Cr. They consist in 'on site' immersion in natural seawater on the one hand, and in laboratory tests with immersion in media enriched with marine sulphide-producing bacteria on the other hand. Gravimetric, microbiological, electrochemical measurements and corrosion product analyses are carried out and show that corrosion phenomenon is composed of several stages. A preliminary step is the reduction of the corrosion kinetics and is correlated with the presence of sessile sulphide-producing bacteria and an important formation of sulphur-containing species. This phase is shorter when the alloying element content of the steel increases. This phase is probably followed by an increase of corrosion, appearing clearly after an 8-month immersion in natural seawater for some of the grade steels. Chromium and molybdenum show at the same time a beneficial influence to generalised corrosion resistance and a toxic effect on sulphide-producing bacteria. This multidisciplinary study reflects the complexity of the interactions between bacteria and steels; sulphide-producing bacteria seem to be involved in corrosion processes in natural seawater and complementary studies would have to clarify occurring mechanisms. (author) [fr

  1. Investigation of the explosion hazards of hydrogen sulphide

    International Nuclear Information System (INIS)

    Saber, A.J.; Sulmistras, A.; Moen, I.O.; Thibault, P.A.

    1986-03-01

    The results of Phase I of an investigation directed towards quantifying the explosion hazards of hydrogen sulphide in air are described. The first phase is focussed on detonation in free hydrogen sulphide/air clouds. Detonation properties, including velocity and pressure, have been calculated and compared with experimental results. The observed detonation structure together with critical tube tests tests are used to assess the detonability of hydrogen sulphide/air mixtures relative to hydrogen and common hydrocarbon gases. Detailed chemical kinetic modelling of hydrogen sulphide combustion in air has been performed to correlate the detonation cell size data and to determine the influence of water vapour on the detonability of hydrogen sulphide in air. Calculations of the blast wave properties for detonation of a hydrogen sulphide/air cloud provide the data required to assess the blast effects of such explosions

  2. High-pressure liquid chromatography of trace elements: Determination of terbium in terbium doped gadolinium oxide sulphide phosphors

    International Nuclear Information System (INIS)

    Mazzucotelli, A.; Dadone, A.; Frache, R.; Baffi, F.; Genoa Univ.

    1982-01-01

    A detailed study of isocratic and gradient elution separations of lanthanides has been carried out. Analyses of industrially and scientifically interesting products such as luminescent phosphors have been carried out by gradient elution with DL-2-hydroxyisobutyric acid. The determination of small amounts of terbium in gadolinium oxide sulphide phosphors is described in which an HCl solution was eluted through a stainless steel column packed with microparticulate silica, with bonded cation-exchange groups. Complete separation of gadolinium and terbium is achieved. Detection is with a variable wavelength detector following post-column complex formation with 4-(2-pyridylazo)-resorcinol monosodium salt. Results obtained on test solutions show good reproducilbity and sensitivtiy and the method may be considered sufficiently reliable to be used in routine quality control procedures. (orig.)

  3. Mechanisms and evolution of oxidative sulfur metabolism in green sulfur bacteria

    DEFF Research Database (Denmark)

    Gregersen, Lea Haarup; Bryant, Donald A.; Frigaard, Niels-Ulrik

    2011-01-01

    Green sulfur bacteria (GSB) constitute a closely related group of photoautotrophic and thiotrophic bacteria with limited phenotypic variation. They typically oxidize sulfide and thiosulfate to sulfate with sulfur globules as an intermediate. Based on genome sequence information from 15 strains...... product is further oxidized to sulfite by the dissimilatory sulfite reductase (DSR) system. This system consists of components horizontally acquired partly from sulfide-oxidizing and partly from sulfate-reducing bacteria. Depending on the strain, the sulfite is probably oxidized to sulfate by one of two...... in sulfate formation in other bacteria has been replaced by the DSR system in GSB. Sequence analyses suggested that the conserved soxJXYZAKBW gene cluster was horizontally acquired by Chlorobium phaeovibrioides DSM 265 from the Chlorobaculum lineage and that this acquisition was mediated by a mobile genetic...

  4. The human gut and groundwater harbor non-photosynthetic bacteria belonging to a new candidate phylum sibling to Cyanobacteria

    Science.gov (United States)

    Di Rienzi, Sara C; Sharon, Itai; Wrighton, Kelly C; Koren, Omry; Hug, Laura A; Thomas, Brian C; Goodrich, Julia K; Bell, Jordana T; Spector, Timothy D; Banfield, Jillian F; Ley, Ruth E

    2013-01-01

    Cyanobacteria were responsible for the oxygenation of the ancient atmosphere; however, the evolution of this phylum is enigmatic, as relatives have not been characterized. Here we use whole genome reconstruction of human fecal and subsurface aquifer metagenomic samples to obtain complete genomes for members of a new candidate phylum sibling to Cyanobacteria, for which we propose the designation ‘Melainabacteria’. Metabolic analysis suggests that the ancestors to both lineages were non-photosynthetic, anaerobic, motile, and obligately fermentative. Cyanobacterial light sensing may have been facilitated by regulators present in the ancestor of these lineages. The subsurface organism has the capacity for nitrogen fixation using a nitrogenase distinct from that in Cyanobacteria, suggesting nitrogen fixation evolved separately in the two lineages. We hypothesize that Cyanobacteria split from Melainabacteria prior or due to the acquisition of oxygenic photosynthesis. Melainabacteria remained in anoxic zones and differentiated by niche adaptation, including for symbiosis in the mammalian gut. DOI: http://dx.doi.org/10.7554/eLife.01102.001 PMID:24137540

  5. Evolution of Acid Mine Drainage Formation in Sulphidic Mine Tailings

    Directory of Open Access Journals (Sweden)

    Bernhard Dold

    2014-07-01

    Full Text Available Sulphidic mine tailings are among the largest mining wastes on Earth and are prone to produce acid mine drainage (AMD. The formation of AMD is a sequence of complex biogeochemical and mineral dissolution processes. It can be classified in three main steps occurring from the operational phase of a tailings impoundment until the final appearance of AMD after operations ceased: (1 During the operational phase of a tailings impoundment the pH-Eh regime is normally alkaline to neutral and reducing (water-saturated. Associated environmental problems include the presence of high sulphate concentrations due to dissolution of gypsum-anhydrite, and/or effluents enriched in elements such as Mo and As, which desorbed from primary ferric hydroxides during the alkaline flotation process. (2 Once mining-related operations of the tailings impoundment has ceased, sulphide oxidation starts, resulting in the formation of an acidic oxidation zone and a ferrous iron-rich plume below the oxidation front, that re-oxidises once it surfaces, producing the first visible sign of AMD, i.e., the precipitation of ferrihydrite and concomitant acidification. (3 Consumption of the (reactive neutralization potential of the gangue minerals and subsequent outflow of acidic, heavy metal-rich leachates from the tailings is the final step in the evolution of an AMD system. The formation of multi-colour efflorescent salts can be a visible sign of this stage.

  6. Comparison of Methods for Estimating Fractional Cover of Photosynthetic and Non-Photosynthetic Vegetation in the Otindag Sandy Land Using GF-1 Wide-Field View Data

    OpenAIRE

    Xiaosong Li; Guoxiong Zheng; Jinying Wang; Cuicui Ji; Bin Sun; Zhihai Gao

    2016-01-01

    Photosynthetic vegetation (PV) and non-photosynthetic vegetation (NPV) are important ground cover types for desertification monitoring and land management. Hyperspectral remote sensing has been proven effective for separating NPV from bare soil, but few studies determined fractional cover of PV (fpv) and NPV (fnpv) using multispectral information. The purpose of this study is to evaluate several spectral unmixing approaches for retrieval of fpv and fnpv in the Otindag Sandy Land using GF-1 wi...

  7. The influence of reaction time on hydrogen sulphide removal from air by means of Fe(III)-EDTA/Fiban catalysts

    Science.gov (United States)

    Wasag, H.; Cel, W.; Chomczynska, M.; Kujawska, J.

    2018-05-01

    The paper deals with a new method of hydrogen sulphide removal from air by its filtration and selective catalytic oxidation with the use of fibrous carriers of Fe(III)-EDTA complex. The basis of these filtering materials includes fibrous ion exchangers with the complex immobilized on their functional groups. It has been established that the degree of catalytic hydrogen sulphide decomposition depends on the reaction time. Thus, the required degree of hydrogen sulphide removal from air could be easily controlled by applying appropriate thickness of the filtering layer under a given filtering velocity. It allows applying very thin filtering layers of the Fe(III)-EDTA/Fiban AK-22 or Fiban A-6 catalysts. The obtained results of the research confirm the applicability of these materials for deep air purification from hydrogen sulphide.

  8. Outcompeting nitrite-oxidizing bacteria in single-stage nitrogen removal in sewage treatment plants: a model-based study.

    Science.gov (United States)

    Pérez, Julio; Lotti, Tommaso; Kleerebezem, Robbert; Picioreanu, Cristian; van Loosdrecht, Mark C M

    2014-12-01

    This model-based study investigated the mechanisms and operational window for efficient repression of nitrite oxidizing bacteria (NOB) in an autotrophic nitrogen removal process. The operation of a continuous single-stage granular sludge process was simulated for nitrogen removal from pretreated sewage at 10 °C. The effects of the residual ammonium concentration were explicitly analyzed with the model. Competition for oxygen between ammonia-oxidizing bacteria (AOB) and NOB was found to be essential for NOB repression even when the suppression of nitrite oxidation is assisted by nitrite reduction by anammox (AMX). The nitrite half-saturation coefficient of NOB and AMX proved non-sensitive for the model output. The maximum specific growth rate of AMX bacteria proved a sensitive process parameter, because higher rates would provide a competitive advantage for AMX. Copyright © 2014 Elsevier Ltd. All rights reserved.

  9. Mutualism between autotrophic and heterophic bacteria in leaching of low grade ores

    International Nuclear Information System (INIS)

    Khalid, Z.M.; Naeveke, R.

    1991-01-01

    During solubilization processes of low grade sulphidic ores, the auto trophic bacteria oxidize reduced sulphur compounds and ferrous iron to sulphates and ferric iron respectively. The ore leaching bio topes are not only colonized by auto trophic bacteria (Thiobacillus spp., Leptospirillum ferro oxidans and sulfolobus sp.) but the heterotrophic microorganisms, including bacteria and fungi of various species are also found in these habitats. The autotrophs, in addition to energy metabolism, also produce organic compounds which in excess amount inhibit their growth. Through the utilization of such compounds and also through the production of carbon dioxide and ammonia, these heterotorphs can help bio leaching processes. Effect of one of the heterotrophs; methylobacterium sp., a nitrogen scavenger, found in as association with the thio bacilli in one of the leaching bio tope in Germany was studied in leaching of a carbonate bearing complex (containing copper, iron, zinc and lead) sulphidic ore, in shake flask studies. T. ferro oxidans (Strain F-40) reported to be non nitrogen fixer and strain F-41, a nitrogen fixing thiobacillus were studied for leachability behaviour alone and in combination with T. thio oxidans (lacking nitrogen fixing ability) using media with and without added ammonium nitrogen. In addition the effect of methylobacterium sp. (alt-25) was also tested with the afore mentioned combinations. Nitrogen fixation by T. ferro oxidans did not suffice the nitrogen requirement and the leaching system in laboratory needed addition of nitrogen. The heterotrophic nitrogen scavenger also did not have a positive influence in nitrogen limited system. In case where ammonium nitrogen was also provided in the media, this heterotroph had a negative in own growth and leaving lesser amount available for thio bacilli. This high amount of acid is a limiting factor in bio leaching of high carbonate uranium ores. Uranium ore ecosystems have also been found to contain

  10. The usage of sulfide and thiosulfate ions by purple non-sulfur bacteria Rhodopseudomonas yavorovii

    Directory of Open Access Journals (Sweden)

    O. V. Tarabas

    2017-07-01

    Full Text Available This article covers the patterns of oxidation of sulfide and thiosulfate ions by bacteria Rhodopseudomonas yavorovii Ya-2016 under different cultivation conditions. In the environments with 1.4–5.6 мМ Na2S2O3, R. yavorovii Ya-2016 bacteria accumulated biomass of 1.4–1.6 g/l, which was higher than biomass (1.2-0.6 g/l accumulated by the bacteria with the same concentrations of Na2S × 9H2O. The efficiency of oxidation of 1.4, 2.8, 5.6 мМ sulfide- and thiosulfate-ions as donors of electrons by the bacteria equaled 97.4, 42.6, 18.7 and 68.8, 28.0, 3.7%, respectively. As a result of bacterial oxidation of 1.4 мМ hydrogen sulfide and sodium thiosulphate in the environment accumulation of 0.13–1.30 мМ sulfate-ions occurs, and the element sulfur becomes an intermediate metabolite in the environment with Na2S×9H2O. R. yavorovii Ya-2016 bacteria are capable of using sulfate-ions as a single source of sulfate at increase in photptrophs. In the environment with 2.5 мМ sulfate-ions concentration the bacteria biomass was 1.4 g/l, the bacteria assimilated 17.7% of sulfates. Because purple non-sulfur bacteria R. yavorovii Ya-2016 are capable of using sulfide-ions as donors of electrons of anoxygenic photosynthesis and using sulfate-ions as a single source of sulfate, they could be successfully used in the technologies of remediating the environment from compounds of sulfur.

  11. On bacteria oxidizing enlargement scale test for uranium in-situ leaching at. 381 mine

    International Nuclear Information System (INIS)

    Hu Kaiguang; Wang Qingliang; Liu Yingjiu; Shi Wenge; Hu Shihe; Hu Yincai; Fang Qiu

    1999-01-01

    The results of enlarged scale test of bacteria as oxidizer for uranium in-situ leaching at No 381 mine showed that redox potential of the oxidized absorbed tailing water by bacteria is more than 510 mV, without any effects on after treatments by using bacteria as oxidizer and reduce oxidizer costs 70% compared with H 2 O 2 as oxidizer

  12. The distribution of trace elements in a range of deep-sea sulphide ore deposits and their impact on seafloor mining

    Science.gov (United States)

    Fallon, E. K.; Scott, T. B.; Brooker, R. A.

    2015-12-01

    Acid rock drainage is a natural weathering process that is often exacerbated by mining activities, common in onshore sulphide ore deposits, that can lead to considerable environmental impact. A similar 'weathering process' occurs at seafloor massive sulphide (SMS) ore deposits. In contrast to the onshore situation, the expected consequence in the marine environment is often considered to be oxide formation, negligible metal release and minimal net acid generation due to the high buffering capacity of seawater and low solubility of iron at near neutral pH. However, no dissolution studies exist that emulate the true composition of sulphide ore deposits that either sit passively on the seafloor or are actively mined in this colder, more saline, and alkaline environment. In particular, these deposits will include a variety of minerals, and it is the interaction of these minerals and inclusions in regards to galvanic cells that can subsequently increase the dissolution of metals into the water column. Any heavy metal release that is not balanced by subsequent oxidation and precipitation, has the potential to produce toxicity for benthic ecosystems, bioaccumulation and dispersal through currents. The present work has sought to provide a pilot investigation on the deep sea weathering of sulphide minerals, by identifying the mineral phases, trace elements and potential galvanic couples that may arise in sulphide mineral samples collected from various tectonic settings. Samples have been analysed using EMPA and LA-ICPMS in order to identify the range of trace elements and toxins that may be contributed to the water column, especially heavy metals and environmental toxins (e.g. Fe, Cu, Zn, Pb, Co, Ni, Cd, As, Sb, Sn, Hg). Our observations raise important questions about which ore deposits could have more or less environmental impact during any mining activity. These observations will be used to design oxidative dissolution experiments at deep-sea conditions utilising the

  13. Cadmium Sulphide-Reduced Graphene Oxide-Modified Photoelectrode-Based Photoelectrochemical Sensing Platform for Copper(II Ions.

    Directory of Open Access Journals (Sweden)

    I Ibrahim

    Full Text Available A photoelectrochemical (PEC sensor with excellent sensitivity and detection toward copper (II ions (Cu2+ was developed using a cadmium sulphide-reduced graphene oxide (CdS-rGO nanocomposite on an indium tin oxide (ITO surface, with triethanolamine (TEA used as the sacrificial electron donor. The CdS nanoparticles were initially synthesized via the aerosol-assisted chemical vapor deposition (AACVD method using cadmium acetate and thiourea as the precursors to Cd2+ and S2-, respectively. Graphene oxide (GO was then dip-coated onto the CdS electrode and sintered under an argon gas flow (50 mL/min for the reduction process. The nanostructured CdS was adhered securely to the ITO by a continuous network of rGO that also acted as an avenue to intensify the transfer of electrons from the conduction band of CdS. The photoelectrochemical results indicated that the ITO/CdS-rGO photoelectrode could facilitate broad UV-visible light absorption, which would lead to a higher and steady-state photocurrent response in the presence of TEA in 0.1 M KCl. The photocurrent decreased with an increase in the concentration of Cu2+ ions. The photoelectrode response for Cu2+ ion detection had a linear range of 0.5-120 μM, with a limit of detection (LoD of 16 nM. The proposed PEC sensor displayed ultra-sensitivity and good selectivity toward Cu2+ ion detection.

  14. Inoculum development by using activated sludge to remove hydrogen sulphide (H2S through biofiltration*

    Directory of Open Access Journals (Sweden)

    Alejandra Mora

    2005-07-01

    Full Text Available Different activated sludges were used for developing an inoculum able to degrade hydrogen sulphide in a pilot scale biofiltration plant using two different support materials: sugarcane bagasse and this bagasse mixed with pumice stone. Adapting and selecting microbial species which degrade hydrogen sulphide (H2S was aided by adding nutrients plus a specific substrate to the activated sludge. Population variation was monitored within the different trophic groups in the biofiter medium during pilot scale plant operation, a general trend towards sulphur-oxidising bacteria (SOB growth being observed as was a decrease in heterotrophic bacteria, molds and yeasts. The activated sludge which showed the highest substrate degradation speed was selected for standardising inoculum preparation; the different nutritional mediums were evaluated during this process. Measuring some variables for controlling the process led to choosing the pH for determining the proper point of inoculum adaptation for this specific substrate. The inoculation procedure and support characteristics in terms of establishing and developing the microbial species increased biofilter removal efficiency by up to 99% from start-up. Key words: biofilter, activated sludge, adapted microorganisms, sulphur-oxidising bacteria, respirometry. Este artículo es el resultado de un proyecto cofinanciado por Colciencias y desarrollado por un grupo de investigadores vinculados al proyecto a través de las entidades Corporación

  15. Physiology of alkaliphilic sulfur-oxidizing bacteria from soda lakes

    NARCIS (Netherlands)

    Banciu, H.L.

    2004-01-01

    The inorganic sulfur oxidation by obligate haloalkaliphilic chemolithoautotrophs was only recently discovered and investigated. These autotrophic sulfur oxidizing bacteria (SOB), capable of oxidation of inorganic sulfur compounds at moderate to high salt concentration and at high pH, can be divided

  16. Role of nitric oxide in cadmium-induced stress on growth, photosynthetic components and yield of Brassica napus L.

    Science.gov (United States)

    Jhanji, Shalini; Setia, R C; Kaur, Navjyot; Kaur, Parminder; Setia, Neelam

    2012-11-01

    Experiments were carried out to study the effect of cadmium (Cd) and exogenous nitric oxide (NO) on growth, photosynthetic attributes, yield components and structural features of Brassica napus L. (cv. GSL 1). Cadmium in the growth medium at different levels (1, 2 and 4 Mm) retarded plant growth viz. shoot (27%) and root (51%) length as compared to control. The accumulation of total dry matter and its partitioning to different plant parts was also reduced by 31% due to Cd toxicity. Photosynthetic parameters viz., leaf area plant(-1) (51%), total Chl (27%), Chl a / Chl b ratio (22%) and Hill reaction activity of chloroplasts (42%) were greatly reduced in Cd-treated plants. Cd treatments adversely affected various yield parameters viz., number of branches (23) and siliquae plant(-1) (246), seed number siliqua(-1) (10.3), 1000-seed weight (2.30g) and seed yield plant(-1) (7.09g). Different Cd treatments also suppressed the differentiation of various tissues like vessels in the root with a maximum inhibition caused by 4mM Cd. Exogenous application of nitric oxide (NO) improved the various morpho-physiological and photosynthetic parameters in control as well as Cd-treated plants.

  17. Sulphide mineralization and wall-rock alteration in ophiolites and modern oceanic spreading centres

    Science.gov (United States)

    Koski, R.A.

    1983-01-01

    Massive and stockwork Fe-Cu-Zn (Cyprus type) sulphide deposits in the upper parts of ophiolite complexes represent hydrothermal mineralization at ancient accretionary plate boundaries. These deposits are probable metallogenic analogues of the polymetallic sulphide deposits recently discovered along modern oceanic spreading centres. Genetic models for these deposits suggest that mineralization results from large-scale circulation of sea-water through basaltic basement along the tectonically active axis of spreading, a zone of high heat flow. The high geothermal gradient above 1 to 2 km deep magma chambers emplaced below the ridge axis drives the convective circulation cell. Cold oxidizing sea-water penetrating the crust on the ridge flanks becomes heated and evolves into a highly reduced somewhat acidic hydrothermal solvent during interaction with basaltic wall-rock. Depending on the temperature and water/rock ratio, this fluid is capable of leaching and transporting iron, manganese, and base metals; dissolved sea-water sulphate is reduced to sulphide. At the ridge axis, the buoyant hydrothermal fluid rises through permeable wall-rocks, and fluid flow may be focussed along deep-seated fractures related to extensional tectonic processes. Metal sulphides are precipitated along channelways as the ascending fluid undergoes adiabatic expansion and then further cooling during mixing with ambient sub-sea-floor water. Vigorous fluid flow results in venting of reduced fluid at the sea-floor/sea-water interface and deposition of massive sulphide. A comparison of sulphide mineralization and wall-rock alteration in ancient and modern spreading centre environments supports this genetic concept. Massive sulphide deposits in ophiolites generally occur in clusters of closely spaced (stacked sequences of pillow basalt and sheet flows, the sea-floor underlying numerous deposits in Guaymas Basin consists of diatomaceous ooze and terrigenous clastic sediment that is intruded by diabase

  18. Biomass and pigments production in photosynthetic bacteria wastewater treatment: effects of light sources.

    Science.gov (United States)

    Zhou, Qin; Zhang, Panyue; Zhang, Guangming

    2015-03-01

    This study is aimed at enhancing biomass and pigments production together with pollution removal in photosynthetic bacteria (PSB) wastewater treatment via different light sources. Red, yellow, blue, white LED and incandescent lamp were used. Results showed different light sources had great effects on the PSB. PSB had the highest biomass production, COD removal and biomass yield with red LED. The corresponding biomass, COD removal and biomass yield reached 2580 mg/L, 88.6% and 0.49 mg-biomass/mg-COD-removal, respectively. The hydraulic retention time of wastewater treatment could be shortened to 72 h with red LED. Mechanism analysis showed higher ATP was produced with red LED than others. Light sources could significantly affect the pigments production. The pigments productions were greatly higher with LED than incandescent lamp. Yellow LED had the highest pigments production while red LED produced the highest carotenoid/bacteriochlorophyll ratio. Considering both efficiency and energy cost, red LED was the optimal light source. Copyright © 2014 Elsevier Ltd. All rights reserved.

  19. Sulphate-reducing bacteria associated with biocorrosion: a review

    Directory of Open Access Journals (Sweden)

    Tania C. de Araujo-Jorge

    1992-09-01

    Full Text Available Biocorrosion means any process of corrosion in wich microorganisms are somehow involved. As far as the petroleum industry is concerned, the anaerobic type is the more important, with Sulphate-Reducing Bacteria (SRB accouting for half of the described processes. SRB are obligate anaerobs that use sulphur, sulphate or other oxidized sulphur compounds as oxidizing agents when decomposing organic material. A typical product of SRB metabolism, hydrogen sulphide -H2S-, is extremely toxic. In the present work we review the literature on mechanisms underlying biocorrosive process in wich SRB are involved and summarize some of the ultrastructural and eletrochemical work developed using SRB obtained from water injection flow in wells located on PETROBRAS offshore marine plataforms, sampled directly in the field over metallic probes, or cultured under laboratory conditions. Biofilms develop when SRB adhere to inert surfaces. A high diversity of morphological types is found inside these biofilms. Their extracellular matrix is highly hydrated and mainly anionic, as shown by its avid reaction with cationic compounds like ruthenium red. We have noted that variations in iron contet lead to interesting changes in the ultrastructure of the bacterial cell coat and also in the rate of corrosion induced in metallic test cupons. Since routine methods to prevent and treat SRB contamination and biodeterioration involve the use of biocides that are toxic and always have some environmental impact, an accurate diagnosis of biocorrosion is always required prior to a treatment decision. We developed a method that detects and semi-quantifies the presence of living or dead SRB by using free silver potentials as an indicator of corrosive action by SRB-associated sulphides. We found a correlation between sulphide levels (determined either by spectrophotometry, or using a silver electrode -E(Ag- that measured changes in free potentials induced by the presence of exogeneously

  20. The fate of arsenic adsorbed on iron oxides in the presence of arsenite-oxidizing bacteria.

    Science.gov (United States)

    Zhang, Zhennan; Yin, Naiyi; Du, Huili; Cai, Xiaolin; Cui, Yanshan

    2016-05-01

    Arsenic (As) is a redox-active metalloid whose toxicity and mobility in soil depend on its oxidation state. Arsenite [As(III)] can be oxidized by microbes and adsorbed by minerals in the soil. However, the combined effects of these abiotic and biotic processes are not well understood. In this study, the fate of arsenic in the presence of an isolated As(III)-oxidizing bacterium (Pseudomonas sp. HN-1, 10(9) colony-forming units (CFUs)·ml(-1)) and three iron oxides (goethite, hematite, and magnetite at 1.6 g L(-1)) was determined using batch experiments. The total As adsorption by iron oxides was lower with bacteria present and was higher with iron oxides alone. The total As adsorption decreased by 78.6%, 36.0% and 79.7% for goethite, hematite and magnetite, respectively, due to the presence of bacteria. As(III) adsorbed on iron oxides could also be oxidized by Pseudomonas sp. HN-1, but the oxidation rate (1.3 μmol h(-1)) was much slower than the rate in the aqueous phase (96.2 μmol h(-1)). Therefore, the results of other studies with minerals only might overestimate the adsorptive capacity of solids in natural systems; the presence of minerals might hinder As(III) oxidation by microbes. Under aerobic conditions, in the presence of iron oxides and As(III)-oxidizing bacteria, arsenic is adsorbed onto iron oxides within the adsorption capacity, and As(V) is the primary form in the solid and aqueous phases. Copyright © 2016 Elsevier Ltd. All rights reserved.

  1. Redox regulation of photosynthetic gene expression.

    Science.gov (United States)

    Queval, Guillaume; Foyer, Christine H

    2012-12-19

    Redox chemistry and redox regulation are central to the operation of photosynthesis and respiration. However, the roles of different oxidants and antioxidants in the regulation of photosynthetic or respiratory gene expression remain poorly understood. Leaf transcriptome profiles of a range of Arabidopsis thaliana genotypes that are deficient in either hydrogen peroxide processing enzymes or in low molecular weight antioxidant were therefore compared to determine how different antioxidant systems that process hydrogen peroxide influence transcripts encoding proteins targeted to the chloroplasts or mitochondria. Less than 10 per cent overlap was observed in the transcriptome patterns of leaves that are deficient in either photorespiratory (catalase (cat)2) or chloroplastic (thylakoid ascorbate peroxidase (tapx)) hydrogen peroxide processing. Transcripts encoding photosystem II (PSII) repair cycle components were lower in glutathione-deficient leaves, as were the thylakoid NAD(P)H (nicotinamide adenine dinucleotide (phosphate)) dehydrogenases (NDH) mRNAs. Some thylakoid NDH mRNAs were also less abundant in tAPX-deficient and ascorbate-deficient leaves. Transcripts encoding the external and internal respiratory NDHs were increased by low glutathione and low ascorbate. Regulation of transcripts encoding specific components of the photosynthetic and respiratory electron transport chains by hydrogen peroxide, ascorbate and glutathione may serve to balance non-cyclic and cyclic electron flow pathways in relation to oxidant production and reductant availability.

  2. Population structure of manganese-oxidizing bacteria in stratified soils and properties of manganese oxide aggregates under manganese-complex medium enrichment.

    Directory of Open Access Journals (Sweden)

    Weihong Yang

    Full Text Available Manganese-oxidizing bacteria in the aquatic environment have been comprehensively investigated. However, little information is available about the distribution and biogeochemical significance of these bacteria in terrestrial soil environments. In this study, stratified soils were initially examined to investigate the community structure and diversity of manganese-oxidizing bacteria. Total 344 culturable bacterial isolates from all substrata exhibited Mn(II-oxidizing activities at the range of 1 µM to 240 µM of the equivalent MnO2. The high Mn(II-oxidizing isolates (>50 mM MnO2 were identified as the species of phyla Actinobacteria, Firmicutes and Proteobacteria. Seven novel Mn(II-oxidizing bacterial genera (species, namely, Escherichia, Agromyces, Cellulomonas, Cupriavidus, Microbacterium, Ralstonia, and Variovorax, were revealed via comparative phylogenetic analysis. Moreover, an increase in the diversity of soil bacterial community was observed after the combined enrichment of Mn(II and carbon-rich complex. The phylogenetic classification of the enriched bacteria represented by predominant denaturing gradient gel electrophoresis bands, was apparently similar to culturable Mn(II-oxidizing bacteria. The experiments were further undertaken to investigate the properties of the Mn oxide aggregates formed by the bacterial isolates with high Mn(II-oxidizing activity. Results showed that these bacteria were closely encrusted with their Mn oxides and formed regular microspherical aggregates under prolonged Mn(II and carbon-rich medium enrichment for three weeks. The biotic oxidation of Mn(II to Mn(III/IV by these isolates was confirmed by kinetic examinations. X-ray diffraction assays showed the characteristic peaks of several Mn oxides and rhodochrosite from these aggregates. Leucoberbelin blue tests also verified the Mn(II-oxidizing activity of these aggregates. These results demonstrated that Mn oxides were formed at certain amounts under the

  3. Chitosan-encapsulated ZnS : M (M: Fe or Mn ) quantum dots for ...

    Indian Academy of Sciences (India)

    Sulphate-reducing bacteria can obtain energy by oxidizing organic compounds ... Sulphate-reducing bacteria then oxidize the hydrogen while creating hydrogen sulphide, which contributes to cor- ... photo oxidizers and photo catalysts [4], photovoltaic solar ... ated with oil and gas production and transportation facilities.

  4. Co-existence of Anaerobic Ammonium Oxidation Bacteria and Denitrifying Anaerobic Methane Oxidation Bacteria in Sewage Sludge: Community Diversity and Seasonal Dynamics.

    Science.gov (United States)

    Xu, Sai; Lu, Wenjing; Mustafa, Muhammad Farooq; Caicedo, Luis Miguel; Guo, Hanwen; Fu, Xindi; Wang, Hongtao

    2017-11-01

    Anaerobic ammonium oxidation (ANAMMOX) and denitrifying anaerobic methane oxidation (DAMO) have been recently discovered as relevant processes in the carbon and nitrogen cycles of wastewater treatment plants. In this study, the seasonal dynamics of ANAMMOX and DAMO bacterial community structures and their abundance in sewage sludge collected from wastewater treatment plants were analysed. Results indicated that ANAMMOX and DAMO bacteria co-existed in sewage sludge in different seasons and their abundance was positively correlated (P bacteria in autumn and winter indicated that these seasons were the preferred time to favour the growth of ANAMMOX and DAMO bacteria. The community structure of ANNAMOX and DAMO bacteria could also shift with seasonal changes. The "Candidatus Brocadia" genus of ANAMMOX bacteria was mainly recovered in spring and summer, and an unknown cluster was primarily detected in autumn and winter. Similar patterns of seasonal variation in the community structure of DAMO bacteria were also observed. Group B was the dominant in spring and summer, whereas in autumn and winter, group A and group B presented almost the same proportion. The redundancy analysis revealed that pH and nitrate were the most significant factors affecting community structures of these two groups (P < 0.01). This study reported the diversity of ANAMMOX and DAMO in wastewater treatment plants that may be the basis for new nitrogen removal technologies.

  5. Fungal-Transformation of Surrogate Sulphides and Carbonaceous ...

    African Journals Online (AJOL)

    user

    boundaries or fractures of sulphides, typically pyrite and arsenopyrite. ... phur in the residual sulphidic materials, and by determining the preg-robbing effect of the treated CM. Within 21 ..... The forms of sulphur in sulphur compounds are gen-.

  6. The inhibitory effects of free ammonia on ammonia oxidizing bacteria and nitrite oxidizing bacteria under anaerobic condition.

    Science.gov (United States)

    Qian, Wenting; Peng, Yongzhen; Li, Xiyao; Zhang, Qiong; Ma, Bin

    2017-11-01

    The free ammonia (FA) inhibition on ammonia oxidizing bacteria (AOB) and nitrite oxidizing bacteria (NOB) under anaerobic condition was investigated in this study. The results indicated that NOB was more sensitive to the FA anaerobic treatment than AOB. The FA anaerobic inhibition on nitrifier gradually heightened with the increase of FA concentration. Accompanied with FA concentration increase from 0 to 16.82mgNH 3 -N·L -1 (the highest concentration adopted in this study), the activity of AOB reduced by 15.9%, while NOB decreased by 29.2%. After FA anaerobic treatment, nitrite was accumulated during nitrification. However, the nitrite accumulation disappeared on the sixth cycle of activity recovery tests with excessive aeration. Based on this result, a novel strategy for achieving nitritation is proposed, which involves recirculating a portion of the activated sludge through a side-line sludge treatment unit, where the sludge is subjected to treatment with FA under anaerobic condition. Copyright © 2017 Elsevier Ltd. All rights reserved.

  7. The role of sulfur-oxidizing bacteria Thiobacillus thiooxidans in pyrite weathering

    International Nuclear Information System (INIS)

    Sasaki, K.; Tsunekawa, M.; Ohtsuka, T.; Konno, H.

    1998-01-01

    The paper investigates the role of the sulfur-oxidizing bacteria Thiobacillus thiooxidans in pyrite weathering in order to clarify the effects of the bacteria on the dissolution behavior of pyrite and the formation of secondary minerals using Raman spectroscopy and powder X-ray diffraction (XRD) in addition to solution analysis. It was found that T. thiooxidans, when present with the iron-oxidizing bacteria Thiobacillus ferrooxidans, enhanced the dissolution of Fe and S species for pyrite, whereas T. thiooxidans alone did not oxidize pyrite. Enhancement of the consumption of elemental sulfur and regeneration of Fe(II) ions were also observed with T. thiooxidans together with T. ferrooxidans, while this did not occur with T. ferrooxidans alone

  8. Geochemical processes in acidic water caused by the weathering of metal sulphides; Procesos geoquimicos en aguas acidas por meteorizacion de sulfuros

    Energy Technology Data Exchange (ETDEWEB)

    Asta Andres, M. P.; Acero Salazar, P.; Auque Sanz, L. F.; Gimeno Serrano, M. J.; Gomez Jimenez, J. B.

    2011-07-01

    Acid generated by the oxidative dissolution of metal sulphides is one of the main sources of pollution in runoff water, groundwater, soils and sediments throughout the world. These types of water are very acidic and contain high concentrations of sulphate and other potentially contaminating elements such Fe, As, Cd, Sb, Zn and Cu. The acidity generated by sulphide oxidation processes is mainly controlled by the type, quantity and distribution of the sulphide-rich rocks, by the physical characteristics of the rocks (since they determine the accessibility of aqueous solutions and gases to the sulphides), by the presence of microorganisms able to catalyze the main chemical reactions involved in the formation of acid drainage, and by the existence of minerals capable of neutralizing acidity. As a result, the generation of acidic water is a very complex problem, the study of which must be undertaken via a multidisciplinary approach, taking into account geological, geochemical, mineralogical and microbiological aspects among others. The aim of our work is to provide a general overview of these processes and other factors that influence the generation and evolution of these systems, together with information concerning current scientific knowledge about each of these approaches. Thus we hope to provide a basic background to the understanding and study of acid-water systems associated with the weathering of metal sulphides and the processes involved in the generation, migration, evolution and natural attenuation of acidic waters in these environments. (Author) 65 refs.

  9. Protection of the photosynthetic apparatus from extreme dehydration and oxidative stress in seedlings of transgenic tobacco.

    Directory of Open Access Journals (Sweden)

    Concepción Almoguera

    Full Text Available A genetic program that in sunflower seeds is activated by Heat Shock transcription Factor A9 (HaHSFA9 has been analyzed in transgenic tobacco seedlings. The ectopic overexpression of the HSFA9 program protected photosynthetic membranes, which resisted extreme dehydration and oxidative stress conditions. In contrast, heat acclimation of seedlings induced thermotolerance but not resistance to the harsh stress conditions employed. The HSFA9 program was found to include the expression of plastidial small Heat Shock Proteins that accumulate only at lower abundance in heat-stressed vegetative organs. Photosystem II (PSII maximum quantum yield was higher for transgenic seedlings than for non-transgenic seedlings, after either stress treatment. Furthermore, protection of both PSII and Photosystem I (PSI membrane protein complexes was observed in the transgenic seedlings, leading to their survival after the stress treatments. It was also shown that the plastidial D1 protein, a labile component of the PSII reaction center, and the PSI core protein PsaB were shielded from oxidative damage and degradation. We infer that natural expression of the HSFA9 program during embryogenesis may protect seed pro-plastids from developmental desiccation.

  10. Non-linear direct effects of acid rain on leaf photosynthetic rate of terrestrial plants.

    Science.gov (United States)

    Dong, Dan; Du, Enzai; Sun, Zhengzhong; Zeng, Xuetong; de Vries, Wim

    2017-12-01

    Anthropogenic emissions of acid precursors have enhanced global occurrence of acid rain, especially in East Asia. Acid rain directly suppresses leaf function by eroding surface waxes and cuticle and leaching base cations from mesophyll cells, while the simultaneous foliar uptake of nitrates in rainwater may directly benefit leaf photosynthesis and plant growth, suggesting a non-linear direct effect of acid rain. By synthesizing data from literature on acid rain exposure experiments, we assessed the direct effects of acid rain on leaf photosynthesis across 49 terrestrial plants in China. Our results show a non-linear direct effect of acid rain on leaf photosynthetic rate, including a neutral to positive effect above pH 5.0 and a negative effect below that pH level. The acid rain sensitivity of leaf photosynthesis showed no significant difference between herbs and woody species below pH 5.0, but the impacts above that pH level were strongly different, resulting in a significant increase in leaf photosynthetic rate of woody species and an insignificant effect on herbs. Our analysis also indicates a positive effect of the molar ratio of nitric versus sulfuric acid in the acid solution on leaf photosynthetic rate. These findings imply that rainwater acidity and the composition of acids both affect the response of leaf photosynthesis and therefore result in a non-linear direct effect. Copyright © 2017 Elsevier Ltd. All rights reserved.

  11. Self-assembly of natural light-harvesting bacteriochlorophylls of green sulfur photosynthetic bacteria in silicate capsules as stable models of chlorosomes.

    Science.gov (United States)

    Saga, Yoshitaka; Akai, Sho; Miyatake, Tomohiro; Tamiaki, Hitoshi

    2006-01-01

    Naturally occurring bacteriochlorophyll(BChl)s-c, -d, and -e from green sulfur photosynthetic bacteria were self-assembled in an aqueous solution in the presence of octadecyltriethoxysilane and tetraethoxysilane, followed by polycondensation of the alkoxysilanes by incubation for 50 h at 25 degrees C. The resulting BChl self-assemblies in silicate capsules exhibited visible absorption and circular dichroism spectra similar to the corresponding natural light-harvesting systems (chlorosomes) of green sulfur bacteria. Dynamic light scattering measurements indicated that the silicate capsules had an average hydrodynamic diameter of several hundred nanometers. BChl self-aggregates in silicate capsules were significantly stable to a nonionic surfactant Triton X-100, which was apt to decompose the BChl aggregates to their monomeric form, compared with conventional micelle systems. BChls in silicate capsules were more tolerant to demetalation of the central magnesium under acidic conditions than the natural systems.

  12. RpoH2 sigma factor controls the photooxidative stress response in a non-photosynthetic rhizobacterium, Azospirillum brasilense Sp7.

    Science.gov (United States)

    Kumar, Santosh; Rai, Ashutosh Kumar; Mishra, Mukti Nath; Shukla, Mansi; Singh, Pradhyumna Kumar; Tripathi, Anil Kumar

    2012-12-01

    Bacteria belonging to the Alphaproteobacteria normally harbour multiple copies of the heat shock sigma factor (known as σ(32), σ(H) or RpoH). Azospirillum brasilense, a non-photosynthetic rhizobacterium, harbours five copies of rpoH genes, one of which is an rpoH2 homologue. The genes around the rpoH2 locus in A. brasilense show synteny with that found in rhizobia. The rpoH2 of A. brasilense was able to complement the temperature-sensitive phenotype of the Escherichia coli rpoH mutant. Inactivation of rpoH2 in A. brasilense results in increased sensitivity to methylene blue and to triphenyl tetrazolium chloride (TTC). Exposure of A. brasilense to TTC and the singlet oxygen-generating agent methylene blue induced several-fold higher expression of rpoH2. Comparison of the proteome of A. brasilense with its rpoH2 deletion mutant and with an A. brasilense strain overexpressing rpoH2 revealed chaperone GroEL, elongation factors (Ef-Tu and EF-G), peptidyl prolyl isomerase, and peptide methionine sulfoxide reductase as the major proteins whose expression was controlled by RpoH2. Here, we show that the RpoH2 sigma factor-controlled photooxidative stress response in A. brasilense is similar to that in the photosynthetic bacterium Rhodobacter sphaeroides, but that RpoH2 is not involved in the detoxification of methylglyoxal in A. brasilense.

  13. Distribution of Sulfate-Reducing Bacteria, O2, and H2s in Photosynthetic Biofilms Determined by Oligonucleotide Probes and Microelectrodes Rid A-1977-2009

    DEFF Research Database (Denmark)

    RAMSING, NB; KUHL, M.; JØRGENSEN, BB

    1993-01-01

    The vertical distribution of sulfate-reducing bacteria (SRB) in photosynthetic biofilms from the trickling filter of a sewage treatment plant was investigated with oligonucleotide probes binding to 16S rRNA. To demonstrate the effect of daylight and photosynthesis and thereby of increased oxygen....... Fluorescent-dye-conjugated oligonucleotides were used as ''phylogenetic'' probes to identify single cells in the slices. Oligonucleotide sequences were selected which were complementary to short sequence elements (16 to 20 nucleotides) within the 16S rRNA of sulfate-reducing bacteria. The probes were labeled...... with fluorescein or rhodamine derivatives for subsequent visualization by epifluorescence microscopy. Five probes were synthesized for eukaryotes, eubacteria, SRB (including most species of the delta group of purple bacteria), Desulfobacter spp., and a nonhybridizing control. The SRB were unevenly distributed...

  14. Culturing photosynthetic bacteria through surface plasmon resonance

    Energy Technology Data Exchange (ETDEWEB)

    Ooms, Matthew D.; Bajin, Lauren; Sinton, David [Department of Mechanical and Industrial Engineering and Centre for Sustainable Energy, University of Toronto, Toronto M5S 3G8 (Canada)

    2012-12-17

    In this work, cultivation of photosynthetic microbes in surface plasmon enhanced evanescent fields is demonstrated. Proliferation of Synechococcus elongatus was obtained on gold surfaces excited with surface plasmons. Excitation over three days resulted in 10 {mu}m thick biofilms with maximum cell volume density of 20% vol/vol (2% more total accumulation than control experiments with direct light). Collectively, these results indicate the ability to (1) excite surface-bound cells using plasmonic light fields, and (2) subsequently grow thick biofilms by coupling light from the surface. Plasmonic light delivery presents opportunities for high-density optofluidic photobioreactors for microalgal analysis and solar fuel production.

  15. Cell biology of anaerobic ammonium-oxidizing bacteria

    NARCIS (Netherlands)

    Niftrik, L.A.M.P. van

    2008-01-01

    Anammox bacteria perform anaerobic ammonium oxidation to dinitrogen gas and belong to the phylum Planctomycetes. Whereas most Prokaryotes consist of one compartment, the cytoplasm bounded by the cytoplasmic membrane and cell wall, the species within this phylum are compartmentalized by intracellular

  16. Reinforcing effects of non-pathogenic bacteria and predation risk: from physiology to life history.

    Science.gov (United States)

    Janssens, Lizanne; Stoks, Robby

    2014-10-01

    The important ecological role of predation risk in shaping populations, communities and ecosystems is becoming increasingly clear. In this context, synergistic effects between predation risk and other natural stressors on prey organisms are gaining attention. Although non-pathogenic bacteria can be widespread in aquatic ecosystems, their role in mediating effects of predation risk has been ignored. We here address the hypothesis that non-pathogenic bacteria may reinforce the negative effects of predation risk in larvae of the damselfly Coenagrion puella. We found synergistic effects for all three life history variables studied: mortality increased, growth reductions were magnified and bacterial load was higher when both non-lethal stressors were combined. The combined exposure to the bacterium and predation risk considerably impaired the two key antipredator mechanisms of the damselfly larvae: they no longer reduced their food intake under predation risk and showed a synergistic reduction in escape swimming speed. The reinforcing negative effects on the fitness-related traits could be explained by the observed synergistic effects on food intake, swimming muscle mass, immune function and oxidative damage. These are likely widespread consequences of energetic constraints and increased metabolic rates associated with the fight-or-flight response. We therefore hypothesize that the here documented synergistic interactions with non-pathogenic bacteria may be widespread. Our results highlight the ignored ecological role of non-pathogenic bacteria in reinforcing the negative effects of predation risk on prey organisms.

  17. An instrumented leach column for the study of sulphide oxidation in waste heaps

    International Nuclear Information System (INIS)

    Lowson, R.T.; Sarbutt, J.V.

    1985-05-01

    The construction, commissioning and first year of operation of a large scale, instrumented leach column are described. The column material was sulphidic mine overburden. Monitored parameters included matrix potential, temperature, redox potential, dissolved oxygen, pore space gas, water addition and drainage, together with pH, Cd, Cu, Fe, Ni, Zn, Cl - , F - , SO 4 2- and PO 4 3- in the effluent

  18. Distribution of bacteria and associated minerals in the gill chamber of the vent shrimp Rimicaris exoculata and related biogeochemical processes

    Science.gov (United States)

    Zbinden, M.; Le Bris, N.; Compere, P.; Gaill, F.

    2004-12-01

    The shrimp Rimicaris exoculata dominates the megafauna of some mid-Atlantic Ridge hydrothermal vent fields. This species harbors a rich bacterial epibiosis inside its gill chamber. At the Rainbow vent field, the epibionts are associated with iron oxide deposits. Investigation of both bacteria and minerals by scanning electron microscopy (SEM) and X-ray microanalysis (EDX) shows the occurrence of three distinct compartments in the gill chamber: (1) the lower pre-branchial chamber, housing bacteria, but devoid of minerals, (2) the "true" branchial chamber that contains the gills and remains free of both bacteria and minerals, and (3) the upper pre-branchial chamber housing the main ectosymbiotic bacterial community and associated iron oxides. According to our chemical and temperature data, abiotic iron oxidation appears to be kinetically inhibited in the environment of the shrimps and this would explain the lack of iron oxide deposits in the first two areas. We propose that, in the third area, iron oxidation is microbially promoted. The discrepancy between the spatial distribution of bacteria and minerals suggests that different bacterial metabolisms are involved in the two compartments. A possible explanation lies in the modification of physico-chemical conditions downstream of the gills, that would reduce the oxygen content and favor the development of bacterial iron-oxidizers in this Fe II-rich environment. A potential role of such iron-oxidizing symbionts in the shrimp diet is suggested. This would be unusual for hydrothermal ecosystems, where most previously described symbioses rely on sulphide or methane as an energy source.

  19. Chemical and electrochemical aspects of the corrosion of stainless steels in the presence of sulphate reducing bacteria

    International Nuclear Information System (INIS)

    Feron, D.

    1990-01-01

    The corrosion behaviour of austenitic and ferritic stainless steels (316 L and 430Ti) in the presence of sulfate reducing bacteria, was investigated by several electrochemical techniques which were coupled with corrosion measurements on coupons and chemical analyses. Experiments were performed with 'Desulfovibrio vulgaris' and 'Desulfovibrio gigas' in three growth media containing lactate and sulfate. The decreases in corrosion potentials were correlated to the increase in sulphide content. The polarization curves showed also the major influence of sulphides on the passivity of stainless steels. Electrochemical impedance measurements were used to provide information in understanding the interactions between growth media or bacteria and stainless steels surfaces. The behaviour of the tested stainless steels in these conditions was mainly dependent on sulphide concentrations. (Author). 7 refs., 8 figs., 4 tabs

  20. [Biodegradation characteristics of o-chlorophenol with photosynthetic bacteria PSB-1D].

    Science.gov (United States)

    Hu, Xiao-min; Dong, Yi-hu; Li, Liang; Lu, Juan; He, Ying-dian; Gao, Yang

    2010-07-01

    A strain of photosynthetic bacteria named PSB-1D with degradation of o-chlorophenol (2-CP) was isolated and screened from the shallow substrate sludge in downstream side of the sewage outfall of an insecticide factory. The PSB-1D is identified preliminarily as Rhodopseudomonas sp. according to its colony and cell morphological properties, physiological biochemical characteristics and absorption spectrum analysis of living cells. The experiments results of relationship between PSB-1D growth and o-chlorophenol degradation showed that the degradation rate of o-chlorophenol was up to 57.26% after 7 days cultural time. The main environmental factors including way of illumination and oxygen, initial pH, cultural temperature, illumination intensity had distinctly influenced on the o-chlorophenol degradation with PSB-1D. The results showed that the optimum conditions were as following: an anaerobic light, pH 7.0, temperature 30 degrees C, illumination intensity 4000 lx,initial o-chlorophenol concentration 50 mg/L. Under that cultural condition, the degradation rate of o-chlorophenol could reach to 62.08%. The degradation kinetic data fitted the Andrews model well. In addition, the biodegradation process of o-chlorophenol can be well described by enzymatic reaction of high concentration inhibition, with the maximum substrate utilization rate 0.309 d(-1), Michaelis-Menten constant 2.733 mg/L, inhibitory constant 230.15 mg/L respectively.

  1. Weakened activity of starved ammonia-oxidizing bacteria by the presence of pre-activated Nitrobacter winogradskyi

    NARCIS (Netherlands)

    Laanbroek, H.J.; Bär-Gilissen, M.J.

    2002-01-01

    Ammonia-oxidizing bacteria are able to maintain a high oxidizing potential during starvation. nitrite has a short-lasting stimulatory effect on the oxidation of ammonia after starvation when supplied simultaneously with fresh ammonium. To examine whether nitrite-oxidizing bacteria as partners in

  2. Weakened activity of starved ammonia-oxidizing bacteria by the presence of pre-activated Nitrobacter winogradskyi

    NARCIS (Netherlands)

    Laanbroek, H.J.; Bär-Gilissen, M.J.

    2002-01-01

    Ammonia-oxidizing bacteria are able to maintain a high oxidizing potential during starvation. Nitrite has a short-lasting stimulatory effect on the oxidation of ammonia after starvation when supplied simultaneously with fresh ammonium9). To examine whether nitrite-oxidizing bacteria as partners in

  3. Non-destructive determination of photosynthetic rates of eight varieties of cassava (Manihot esculenta Crantz)

    International Nuclear Information System (INIS)

    Amadu, A. A.

    2015-07-01

    Cassava is an important food security crop in Ghana and in the wake of climate change there is the need for plant breeders to develop varieties with high water use efficiency as well as high photosynthetic rate in order to adapt to the changing climate. Thus, the photosynthetic rates of eight cassava (Manihot esculenta Crantz) varieties were non-destructively evaluated using photosynthesis meter miniPPM300, from June 2014 to May 2015, with the aim of selecting varieties with high photosynthetic rate for future breeding programmes. The mean photosynthetic rate varied depending on the varieties ranging from 40.5 μmol/m 2 s in Bosom nsia to 45.2 μmol/m 2 s in Gbenze. However, the presence of African cassava mosaic disease (ACMD) marginally reduced the photosynthetic rate to below 40 μmol/m 2 s in all the varieties. Similarly, the chlorophyll content index (CCI) as measured by chlorophyll meter and spectrophotometer also varied from one variety to another; it was low in Nandom (17.9 CCI) and high in Gbenze (39.93 CCI) using the chlorophyll meter and was also reduced by the presence of the virus. Although, the stomatal density varied between the varieties it was not influenced by virus infection. Furthermore, ACMD significantly decreased the leaf surface area from 5705.8mm 2 in uninfected plants to 1251.6mm 2 in infected plants, consequently reducing the number and weight of tubers produced 11 month after planting (MAP). Molecular Testing of the viruses using virus specific primers JSP001/JSP002, EAB555F/EAB555R, EACMV1e/EACMV2e at 6 MAP and 11MAP, showed that the mosaic symptoms were caused by African Cassava Mosaic virus disease. Cassava varieties with high photosynthetic efficiency and low virus infection can be used in cassava improvement programmes in Ghana. (au)

  4. Precipitation of metal sulphides using gaseous hydrogen sulphide: mathematical modelling

    NARCIS (Netherlands)

    Al Tarazi, M.Y.M.; Heesink, Albertus B.M.; Versteeg, Geert

    2004-01-01

    A mathematical model has been developed that describes the precipitation of metal sulffides in an aqueous solution containing two different heavy metal ions. The solution is assumed to consist of a well-mixed bulk and a boundary layer that is contacted with hydrogen sulphide gas. The model makes use

  5. Different Abilities of Eight Mixed Cultures of Methane-oxidizing Bacteria to Degrade TCE

    DEFF Research Database (Denmark)

    Broholm, Kim; Christensen, Thomas Højlund; Jensen, Bjørn K.

    1993-01-01

    The ability of eight mixed cultures of methane-oxidizing bacteria to degrade trichloroethylene (TCE) was examined in laboratory batch experiments. This is one of the first reported works studying TCE degradation by mixed cultures of methane-oxidizing bacteria at 10°C, a common temperature for soils...... methanol, but only for a limited time period of about 5 days. Several explanations for the discontinued degradation of TCE are given. An experiment carried out to re-activate the methane-oxidizing bacteria after 8 days of growth on methanol by adding methane did not immediately result in degradation...... of methane and TCE. During the first 10–15 days after the addition of methane a significant degradation of methane and a minor degradation of TCE were observed. This experiment revealed that the ability of mixed cultures of methane-oxidizing bacteria to degrade TCE varied significantly even though...

  6. Performance evaluation of oxygen, air and nitrate for the microaerobic removal of hydrogen sulphide in biogas from sludge digestion.

    Science.gov (United States)

    Díaz, I; Lopes, A C; Pérez, S I; Fdz-Polanco, M

    2010-10-01

    The removal performance of hydrogen sulphide in severely polluted biogas produced during the anaerobic digestion of sludge was studied by employing pure oxygen, air and nitrate as oxidant reactives supplied to the biodigester. Research was performed in a 200-L digester with an hydraulic retention time (HRT) of ∼20 days under mesophilic conditions. The oxygen supply (0.25 N m³/m³ feed) to the bioreactor successfully reduced the hydrogen sulphide content from 15,811 mg/N m³ to less than 400 mg/N m³. The introduction of air (1.27 N m³/m³ feed) removed more than 99% of the hydrogen sulphide content, with a final concentration of ∼55 mg/N m³. COD removal, VS reduction and methane yield were not affected under microaerobic conditions; however, methane concentration in the biogas decreased when air was employed as a result of nitrogen dilution. The nitrate addition was not effective for hydrogen sulphide removal in the biogas. Copyright © 2010 Elsevier Ltd. All rights reserved.

  7. Global warming enhances sulphide stress in a key seagrass species (NW Mediterranean).

    Science.gov (United States)

    García, Rosa; Holmer, Marianne; Duarte, Carlos M; Marbà, Núria

    2013-12-01

    The build-up of sulphide concentrations in sediments, resulting from high inputs of organic matter and the mineralization through sulphate reduction, can be lethal to the benthos. Sulphate reduction is temperature dependent, thus global warming may contribute to even higher sulphide concentrations and benthos mortality. The seagrass Posidonia oceanica is very sensitive to sulphide stress. Hence, if concentrations build up with global warming, this key Mediterranean species could be seriously endangered. An 8-year monitoring of daily seawater temperature, the sulphur isotopic signatures of water (δ(34)S(water)), sediment (δ(34)SCRS ) and P. oceanica leaf tissue (δ(34)S(leaves)), along with total sulphur in leaves (TS(leaves)) and annual net population growth along the coast of the Balearic archipelago (Western Mediterranean) allowed us to determine if warming triggers P. oceanica sulphide stress and constrains seagrass survival. From the isotopic S signatures, we estimated sulphide intrusion into the leaves (F(sulphide)) and sulphur incorporation into the leaves from sedimentary sulphides (SS(leaves)). We observed lower δ(34)S(leaves), higher F(sulphide) and SS(leaves) coinciding with a 6-year period when two heat waves were recorded. Warming triggered sulphide stress as evidenced by the negative temperature dependence of δ(34)S(leaves) and the positive one of F(sulphide), TS(leaves) and SS(leaves). Lower P. oceanica net population growth rates were directly related to higher contents of TS(leaves). At equivalent annual maximum sea surface water temperature (SST(max)), deep meadows were less affected by sulphide intrusion than shallow ones. Thus, water depth acts as a protecting mechanism against sulphide intrusion. However, water depth would be insufficient to buffer seagrass sulphide stress triggered by Mediterranean seawater summer temperatures projected for the end of the 21st century even under scenarios of moderate greenhouse gas emissions, A1B

  8. [Potential Carbon Fixation Capability of Non-photosynthetic Microbial Community at Different Depth of the South China Sea and Its Response to Different Electron Donors].

    Science.gov (United States)

    Fang, Feng; Wang, Lei; Xi, Xue-fei; Hu, Jia-jun; Fu, Xiao-hua; Lu, Bing; Xu, Dian-sheng

    2015-05-01

    The seawater samples collected from many different areas with different depth in the South China Sea were cultivated using different electron donors respectively. And the variation in the potential carbon fixation capability ( PCFC ) of non-photosynthetic microbial community (NPMC) in seawater with different depth was determined after a cycle of cultivation through the statistic analysis. In addition, the cause for the variation was clarified through analyzing key gene abundance regarding CO2 fixation and characteristics of seawater with different depth. The result showed that the PCFCs of NPMC in seawater with different depth were generally low and had no significant difference when using NaNO2 as the electron donor. The PCFC of NPMC in surface seawater was higher than that in deep seawater when using H2 as the electron donor, on the contrary, the PCFC of NPMC in deep seawater was higher than that in surface seawater when using Na2S2O3 as the electron donor. The abundance of the main CO2 fixation gene cbbL in surface seawater was higher than that in deep seawater while the cbbM gene abundance in deep seawater was higher than that in surface seawater. Most hydrogen-oxidizing bacteria had the cbbL gene, and most sulfur bacteria had the cbbM gene. The tendency of seawater cbbL/cbbM gene abundance with the change of depth revealed that there were different kinds of bacteria accounting for the majority in NPMC fixing CO2 at different depth of ocean, which led to different response of PCFC of NPMC at different depth of the sea to different electron donors. The distributions of dissolved oxygen and inorganic carbon concentration with the change of the depth of the sea might be an important reason leading to the difference of NPMC structure and even the difference of PCFC at different depth of the sea.

  9. Photosynthetic water oxidation: binding and activation of substrate waters for O-O bond formation.

    Science.gov (United States)

    Vinyard, David J; Khan, Sahr; Brudvig, Gary W

    2015-01-01

    Photosynthetic water oxidation occurs at the oxygen-evolving complex (OEC) of Photosystem II (PSII). The OEC, which contains a Mn4CaO5 inorganic cluster ligated by oxides, waters and amino-acid residues, cycles through five redox intermediates known as S(i) states (i = 0-4). The electronic and structural properties of the transient S4 intermediate that forms the O-O bond are not well understood. In order to gain insight into how water is activated for O-O bond formation in the S4 intermediate, we have performed a detailed analysis of S-state dependent substrate water binding kinetics taking into consideration data from Mn coordination complexes. This analysis supports a model in which the substrate waters are both bound as terminal ligands and react via a water-nucleophile attack mechanism.

  10. Studying microfungi-mineral interactions in sulphide-bearing waste-rock dumps: a 7 years survey in the Libiola mine, North-Eastern Italy

    Science.gov (United States)

    Marescotti, P.; Cecchi, G.; Di Piazza, S.; Lucchetti, G.; Zotti, M.

    2015-12-01

    Sulphide-bearing waste-rock dumps represent complex geological systems characterised by high percentages of low-grade mineralisations and non-valuable sulphides (such as pyrite and pyrrhotite). The sulphide oxidation triggers acid mine drainage (AMD) processes and the release of several metals of environmental concern. The severe physicochemical properties of these metal-contaminated environments tend to inhibit soil forming processes and represent an important stress factor for the biotic communities by exerting a strong selective pressure. Some macro- and micro-fungi are pioneer and extremophile organisms, which may survive and tolerate high concentrations of toxic metals in contaminated environments. Many studies show the fungal capability to bioaccumulate, biosorb, and store in their cells a high concentration of ecotoxic metals. A 7 years multidisciplinary survey was carried out in the Libiola sulphide mine. The results evidenced that the waste rock dumps of the area are characterized by an extremely poor flora and a specific mycobiota, due to the soil acidity, high concentration of trace metals, and unavailability or paucity of nutrients and organic matter. Our studies allowed the complete mineralogical, geochemical, and mycological characterization of one of the biggest dumps of the mine. 30 microfungal vital strains were isolated in pure cultures and studied with molecular and morphological approach, for their identification. The results allowed the isolation of some rare and important extremophilic species. Penicillium was the most recurrent genus, together with Trichoderma and Cladosporium. In particular, Penicillium glandicola is a rare species previously isolated from cave or arid environments, whereas P. brevicompactum is one of the most important fungi for metal corrosion. Hence, some bioaccumulation tests allowed to select a Trichoderma harzianum strain efficient to uptake Cu and Ag from pyrite-bearing soils, highlighting its central role in fungal

  11. Growth kinetics of hydrogen sulfide oxidizing bacteria in corroded concrete from sewers

    International Nuclear Information System (INIS)

    Jensen, Henriette Stokbro; Lens, Piet N.L.; Nielsen, Jeppe L.; Bester, Kai; Nielsen, Asbjorn Haaning; Hvitved-Jacobsen, Thorkild; Vollertsen, Jes

    2011-01-01

    Hydrogen sulfide oxidation by microbes present on concrete surfaces of sewer pipes is a key process in sewer corrosion. The growth of aerobic sulfur oxidizing bacteria from corroded concrete surfaces was studied in a batch reactor. Samples of corrosion products, containing sulfur oxidizing bacteria, were suspended in aqueous solution at pH similar to that of corroded concrete. Hydrogen sulfide was supplied to the reactor to provide the source of reduced sulfur. The removal of hydrogen sulfide and oxygen was monitored. The utilization rates of both hydrogen sulfide and oxygen suggested exponential bacterial growth with median growth rates of 1.25 d -1 and 1.33 d -1 as determined from the utilization rates of hydrogen sulfide and oxygen, respectively. Elemental sulfur was found to be the immediate product of the hydrogen sulfide oxidation. When exponential growth had been achieved, the addition of hydrogen sulfide was terminated leading to elemental sulfur oxidation. The ratio of consumed sulfur to consumed oxygen suggested that sulfuric acid was the ultimate oxidation product. To the knowledge of the authors, this is the first study to determine the growth rate of bacteria involved in concrete corrosion with hydrogen sulfide as source of reduced sulfur.

  12. Anaerobic Oxidization of Methane in a Minerotrophic Peatland: Enrichment of Nitrite-Dependent Methane-Oxidizing Bacteria

    Science.gov (United States)

    Zhu, Baoli; van Dijk, Gijs; Fritz, Christian; Smolders, Alfons J. P.; Pol, Arjan; Jetten, Mike S. M.

    2012-01-01

    The importance of anaerobic oxidation of methane (AOM) as a methane sink in freshwater systems is largely unexplored, particularly in peat ecosystems. Nitrite-dependent anaerobic methane oxidation (n-damo) was recently discovered and reported to be catalyzed by the bacterium “Candidatus Methylomirabilis oxyfera,” which is affiliated with the NC10 phylum. So far, several “Ca. Methylomirabilis oxyfera” enrichment cultures have been obtained using a limited number of freshwater sediments or wastewater treatment sludge as the inoculum. In this study, using stable isotope measurements and porewater profiles, we investigated the potential of n-damo in a minerotrophic peatland in the south of the Netherlands that is infiltrated by nitrate-rich ground water. Methane and nitrate profiles suggested that all methane produced was oxidized before reaching the oxic layer, and NC10 bacteria could be active in the transition zone where countergradients of methane and nitrate occur. Quantitative PCR showed high NC10 bacterial cell numbers at this methane-nitrate transition zone. This soil section was used to enrich the prevalent NC10 bacteria in a continuous culture supplied with methane and nitrite at an in situ pH of 6.2. An enrichment of nitrite-reducing methanotrophic NC10 bacteria was successfully obtained. Phylogenetic analysis of retrieved 16S rRNA and pmoA genes showed that the enriched bacteria were very similar to the ones found in situ and constituted a new branch of NC10 bacteria with an identity of less than 96 and 90% to the 16S rRNA and pmoA genes of “Ca. Methylomirabilis oxyfera,” respectively. The results of this study expand our knowledge of the diversity and distribution of NC10 bacteria in the environment and highlight their potential contribution to nitrogen and methane cycles. PMID:23042166

  13. Investigation of sulphides in iron alloys of high purity

    International Nuclear Information System (INIS)

    Wyjadlowski, T.

    1973-01-01

    This research thesis reports the study of the morphology and composition of sulphides in iron alloys with respect to metal composition and to the nature of impurities. In order to understand the specific action of each addition on inclusion morphology, this work has started with high-purity alloys (binary alloys and then ternary alloys). The author studied whether solubility variations would entail either intergranular or intragranular or hybrid iron sulphide precipitation. He examined whether sulphide morphology is depending on thermal treatment, and whether equilibrium precipitates were different in terms of morphology and composition at high and room temperature. He studied the influence of addition elements on sulphide morphology and composition, an important issue as some elements may reduce brittleness. These elements are classified in terms of affinity with sulphur

  14. Ultrafast time-resolved carotenoid to-bacteriochlorophyll energy transfer in LH2 complexes from photosynthetic bacteria.

    Science.gov (United States)

    Cong, Hong; Niedzwiedzki, Dariusz M; Gibson, George N; LaFountain, Amy M; Kelsh, Rhiannon M; Gardiner, Alastair T; Cogdell, Richard J; Frank, Harry A

    2008-08-28

    Steady-state and ultrafast time-resolved optical spectroscopic investigations have been carried out at 293 and 10 K on LH2 pigment-protein complexes isolated from three different strains of photosynthetic bacteria: Rhodobacter (Rb.) sphaeroides G1C, Rb. sphaeroides 2.4.1 (anaerobically and aerobically grown), and Rps. acidophila 10050. The LH2 complexes obtained from these strains contain the carotenoids, neurosporene, spheroidene, spheroidenone, and rhodopin glucoside, respectively. These molecules have a systematically increasing number of pi-electron conjugated carbon-carbon double bonds. Steady-state absorption and fluorescence excitation experiments have revealed that the total efficiency of energy transfer from the carotenoids to bacteriochlorophyll is independent of temperature and nearly constant at approximately 90% for the LH2 complexes containing neurosporene, spheroidene, spheroidenone, but drops to approximately 53% for the complex containing rhodopin glucoside. Ultrafast transient absorption spectra in the near-infrared (NIR) region of the purified carotenoids in solution have revealed the energies of the S1 (2(1)Ag-)-->S2 (1(1)Bu+) excited-state transitions which, when subtracted from the energies of the S0 (1(1)Ag-)-->S2 (1(1)Bu+) transitions determined by steady-state absorption measurements, give precise values for the positions of the S1 (2(1)Ag-) states of the carotenoids. Global fitting of the ultrafast spectral and temporal data sets have revealed the dynamics of the pathways of de-excitation of the carotenoid excited states. The pathways include energy transfer to bacteriochlorophyll, population of the so-called S* state of the carotenoids, and formation of carotenoid radical cations (Car*+). The investigation has found that excitation energy transfer to bacteriochlorophyll is partitioned through the S1 (1(1)Ag-), S2 (1(1)Bu+), and S* states of the different carotenoids to varying degrees. This is understood through a consideration of the

  15. A mathematical model of bacteria capable of complete oxidation of ammonium predicts improved nitrogen removal and reduced production of nitrous oxide

    OpenAIRE

    Pokhilko, Alexandra; Ebenhöh, Oliver

    2017-01-01

    The removal of excess nutrients\\ud from water ecosystems requires oxidation of toxic\\ud ammonium by two types of bacteria; one oxidizes\\ud ammonium to nitrite and the other oxidizes nitrite\\ud to nitrate. The oxidation of ammonium is often\\ud incomplete and nitrite accumulates. Nitrite is also\\ud toxic, and is converted by the ammoniumoxidizing\\ud bacteria to nitrous oxide, a powerful\\ud greenhouse gas. Here we use mathematical\\ud modeling to analyze a potential solution to the\\ud problems re...

  16. Enhancing the auto-flocculation of photosynthetic bacteria to realize biomass recovery in brewery wastewater treatment.

    Science.gov (United States)

    Lu, Haifeng; Dong, Shan; Zhang, Guangming; Han, Ting; Zhang, Yuanhui; Li, Baoming

    2018-02-15

    Photosynthetic bacteria (PSB) wastewater treatment technology can simultaneously realize wastewater purification and biomass production. The produced biomass contains high value-added products, which can be used in medical and agricultural industry. However, because of the small size and high electronegativity, PSB are hard to be collected from wastewater, which hampers the commercialization of PSB-based industrial processes. Auto-flocculation is a low cost, energy saving, non-toxic biomass collection method for microbiology. In this work, the influence factors with their optimal levels and mechanism for enhancing the auto-flocculation of PSB were investigated in pure cultivation medium. Then PSB auto-flocculation performance in real brewery wastewater was probed. Results showed that Na + concentration, pH and light intensity were three crucial factors except the initial inoculum sizes and temperature. In the pure medium cultivation system, the optimal condition for PSB auto-flocculation was as follows: pH was 9.5, inoculum size was 420 mg l -1 , Na + concentration was 0.067 mol l -1 , light intensity was 5000 lux, temperature was 30°C. Under the optimal condition, the auto-flocculation ratio and biomass recovery reached 85.0% and 1488 mg l -1 , which improved by 1.67-fold and 2.14-fold compared with the PSB enrichment cultivation conditions, respectively. Mechanism analysis showed that the protein/polysaccharides ratio and absolute Zeta potential value had a liner relationship. For the brewery wastewater treatment, under the above optimal condition, the chemical oxygen demand removal reached 94.3% with the auto-flocculation ratio and biomass recovery of 89.6% and 1510 mg l -1 , which increased 2.75-fold and 2.77-fold, respectively.

  17. Investigation of copper(I sulphide leaching in oxidative hydrochloric acid solution

    Directory of Open Access Journals (Sweden)

    Branislav Marković

    2015-12-01

    Full Text Available Present work is focused on the copper (I sulphide leaching with sodium chloride in hydrochloric acid solution and with introduction of gaseous oxygen. Chemical reactions of leaching and their thermodynamic probabilities are predicted based on the literature data and products which were formed during the process and the overall leaching reaction was defined. The influence of temperature and time on the leaching degree of copper was experimentally determined. The quantity of dissolved copper increases with the increase of both investigated parameters. Elemental sulphur was formed as the main leaching product, precipitated at the particle surfaces and chloride ions have a role to disrupt the creation of this passive layer.

  18. Photosynthetic fuel for heterologous enzymes

    DEFF Research Database (Denmark)

    Mellor, Silas Busck; Vavitsas, Konstantinos; Nielsen, Agnieszka Janina Zygadlo

    2017-01-01

    of reducing power. Recent work on the metabolic engineering of photosynthetic organisms has shown that the electron carriers such as ferredoxin and flavodoxin can be used to couple heterologous enzymes to photosynthetic reducing power. Because these proteins have a plethora of interaction partners and rely...... on electrostatically steered complex formation, they form productive electron transfer complexes with non-native enzymes. A handful of examples demonstrate channeling of photosynthetic electrons to drive the activity of heterologous enzymes, and these focus mainly on hydrogenases and cytochrome P450s. However......, competition from native pathways and inefficient electron transfer rates present major obstacles, which limit the productivity of heterologous reactions coupled to photosynthesis. We discuss specific approaches to address these bottlenecks and ensure high productivity of such enzymes in a photosynthetic...

  19. Case studies of hydrogen sulphide occupational exposure incidents in the UK.

    Science.gov (United States)

    Jones, Kate

    2014-12-15

    The UK Health and Safety Executive has investigated several incidents of workplace accidents involving hydrogen sulphide exposure in recent years. Biological monitoring has been used in some incidents to determine the cause of unconsciousness resulting from these incidents and as a supporting evidence in regulatory enforcement. This paper reports on three case incidents and discusses the use of biological monitoring in such cases. Biological monitoring has a role in identifying hydrogen sulphide exposure in incidents, whether these are occupational or in the wider environment. Sample type, time of collection and sample storage are important factors in the applicability of this technique. For non-fatal incidents, multiple urine samples are recommended at two or more time points between the incident and 15 h post-exposure. For routine occupational monitoring, post-shift samples should be adequate. Due to endogenous levels of urinary thiosulphate, it is likely that exposures in excess of 12 ppm for 30 min (or 360 ppm/min equivalent) would be detectable using biological monitoring. This is within the Acute Exposure Guideline Level 2 (the level of the chemical in air at or above which there may be irreversible or other serious long-lasting effects or impaired ability to escape) for hydrogen sulphide. Crown Copyright © 2014. Published by Elsevier Ireland Ltd. All rights reserved.

  20. Succession of cable bacteria and electric currents in marine sediment

    DEFF Research Database (Denmark)

    Schauer, Regina; Risgaard-Petersen, Nils; Kjeldsen, Kasper Urup

    2014-01-01

    conductivity, we followed a population for 53 days after exposing sulphidic sediment with initially no detectable filaments to oxygen. After 10 days, cable bacteria and electric currents were established throughout the top 15[thinsp]mm of the sediment, and after 21 days the filament density peaked with a total......][mu]m, with a general increase over time and depth, and yet they shared 16S rRNA sequence identity of >98%. Comparison of the increase in biovolume and electric current density suggested high cellular growth efficiency. While the vertical expansion of filaments continued over time and reached 30[thinsp]mm, the electric...... current density and biomass declined after 13 and 21 days, respectively. This might reflect a breakdown of short filaments as their solid sulphide sources became depleted in the top layers of the anoxic zone. In conclusion, cable bacteria combine rapid and efficient growth with oriented movement...

  1. Oxidative Damage Caused by Common Foodborne Pathogenic Bacteria in Egg Yolk

    Directory of Open Access Journals (Sweden)

    Reyhaneh Afshordi

    2016-02-01

    Full Text Available Background: Bacteria in foodstuff are the most important agent of foodborne disease. Aside from their infectious effects, obligate aerobes have a respiratory metabolism with oxygen as the terminal electron acceptor. Therefore, they can produce reactive oxygen species and free radicals in contaminated food. Malondialdehyde (MDA is a product of lipid peroxidation used as an indicator of oxidative stress. Objectives: This study aimed to evaluate the oxidative damage produced by two common food pathogenic bacteria in foodstuff. Materials and Methods: The egg yolks were incubated with different dilutions (105,106, and 107 of Staphylococcus aureus and Salmonella enteritidis at 37°C for 20 hours. The level of MDA in egg yolk was measured by fast and simple enzymatic or colorimetric methods, such as the thiobarbituric acid reactive species method. Results: The high group (107 had a higher MDA level of 1.97 ± 0.11 (μg MDA/g in S. aureus and 1.65 ± 0.27 (mg MDA/L in S. enteritidis than the control (0.90 ± 0.13 mg MDA/L. Conclusions: We concluded that common food pathogenic bacteria can induce oxidative damage in foodstuff aside from other common problems. Heating or sterilization methods cannot protect foodstuff from the damage caused by the presence of pathogenic bacteria.

  2. The first report on SILAR deposited nano-structured uranyl sulphide thin films and their chemical conversion to silver sulphide

    International Nuclear Information System (INIS)

    Garole, Dipak J.; Tetgure, Sandesh R.; Borse, Amulrao U.; Yogesh R Toda; Vaman J Garole; Babasaheb R Sankapal; Prashant K Baviskar

    2015-01-01

    This paper reports the novel synthesis of uranyl sulphide (UO_2S) thin films using the successive ionic layer adsorption and reaction (SILAR) technique at room temperature. Cationic exchange reaction was used to convert uranyl sulphide (UO_2S) to silver sulphide (Ag_2S). The influence of concentration variation on the structural and optical properties of UO_2S and Ag_2S thin films was investigated. The structural, surface morphological, elemental analysis and optical absorption studies were performed. Structural studies revealed that all the deposited films were nano-sized and amorphous in nature. Surface morphology showed that all the grains were spherical and granular in nature and grains got conglomerated to form a large particle. Also, the variations of the optical band gap and the width of the tail of localized states were represented as a function of various parameters. (authors)

  3. Carbon metabolic pathways in phototrophic bacteria and their broader evolutionary implications

    Directory of Open Access Journals (Sweden)

    Kuo-Hsiang eTang

    2011-08-01

    Full Text Available Photosynthesis is the biological process that converts solar energy to biomass, bio-products and biofuel. It is the only major natural solar energy storage mechanism on Earth. To satisfy the increased demand for sustainable energy sources and identify the mechanism of photosynthetic carbon assimilation, which is one of the bottlenecks in photosynthesis, it is essential to understand the process of solar energy storage and associated carbon metabolism in photosynthetic organisms. Researchers have employed physiological studies, microbiological chemistry, enzyme assays, genome sequencing, transcriptomics, and 13C-based metabolomics/fluxomics to investigate central carbon metabolism and enzymes that operate in phototrophs. In this report, we review diverse CO2 assimilation pathways, acetate assimilation, carbohydrate catabolism, the TCA cycle and some key and/or unconventional enzymes in central carbon metabolism of phototrophic microorganisms. We also discuss the reducing equivalent flow during photoautotrophic and photoheterotrophic growth, evolutionary links in the central carbon metabolic network, and correlations between photosynthetic and non-photosynthetic organisms. Considering the metabolic versatility in these fascinating and diverse photosynthetic bacteria, many essential questions in their central carbon metabolism still remain to be addressed.

  4. SR-Site - sulphide content in the groundwater at Forsmark

    Energy Technology Data Exchange (ETDEWEB)

    Tullborg, E-L (Terralogica (Sweden)); Smellie, J (Conterra (Sweden)); Nilsson, A-Ch (Geosigma (Sweden)); Gimeno, M J; Auque, LF (Univ. of Zaragoza (Spain)); Bruchert, V (Stockholms Universitet (Sweden)); Molinero, J (Amphos21 (Spain))

    2010-12-15

    Sulphide concentrations in groundwater play a key role in the long-term reliability of the metal canisters containing the radioactive waste within a disposal facility for nuclear waste. This is because sulphide in the groundwaters circulating in the vicinity of the deposition tunnels can react with copper in the canisters causing corrosion and therefore reducing their expected lifetime; in a worst case scenario erosion of the bentonite buffer material will expose the canister more rapidly to the fracture groundwater.Sulphide in the groundwater is predominantly microbially produced and thereby controlled by the content of oxidised sulphur sources, organics (carbon sources), reductants (mainly Fe(II), DOC, H{sub 2} and CH{sub 4}), and also flow and mixing of different groundwater types. In addition, achieved saturation in respect to amorphous Fe-monosulphide will control the possible maximum values and will also limit the Fe2+ and S2- values in the groundwater. The aim of this report is to assess realistic, representative and reliable sulphide groundwater concentrations at present conditions in Forsmark and also to evaluate possible changes during different climatic conditions covering the repository operation period (some tens to hundreds of years), post closure conditions (some thousand of years) and the proceeding temperate period (some tens of thousands of years) which may be extended due to enhanced greenhouse effects etc. It is expected that this period will be followed by the onset of the next glaciation during which periglacial (permafrost), glacial and postglacial conditions may succeed each other. To achieve these aims, an evaluation is performed of all the sulphide-related data reported from the Forsmark site investigations /Laaksoharju et al. 2008/ and later monitoring campaigns, all of which are stored in the Sicada database. This evaluation shows that values from the Complete Chemical Characterisation (CCC) sampling are usually lower than those measured

  5. SR-Site - sulphide content in the groundwater at Forsmark

    International Nuclear Information System (INIS)

    Tullborg, E-L; Smellie, J; Nilsson, A-Ch; Gimeno, M J; Auque, LF; Bruchert, V; Molinero, J

    2010-12-01

    Sulphide concentrations in groundwater play a key role in the long-term reliability of the metal canisters containing the radioactive waste within a disposal facility for nuclear waste. This is because sulphide in the groundwaters circulating in the vicinity of the deposition tunnels can react with copper in the canisters causing corrosion and therefore reducing their expected lifetime; in a worst case scenario erosion of the bentonite buffer material will expose the canister more rapidly to the fracture groundwater.Sulphide in the groundwater is predominantly microbially produced and thereby controlled by the content of oxidised sulphur sources, organics (carbon sources), reductants (mainly Fe(II), DOC, H 2 and CH 4 ), and also flow and mixing of different groundwater types. In addition, achieved saturation in respect to amorphous Fe-monosulphide will control the possible maximum values and will also limit the Fe 2+ and S 2- values in the groundwater. The aim of this report is to assess realistic, representative and reliable sulphide groundwater concentrations at present conditions in Forsmark and also to evaluate possible changes during different climatic conditions covering the repository operation period (some tens to hundreds of years), post closure conditions (some thousand of years) and the proceeding temperate period (some tens of thousands of years) which may be extended due to enhanced greenhouse effects etc. It is expected that this period will be followed by the onset of the next glaciation during which periglacial (permafrost), glacial and postglacial conditions may succeed each other. To achieve these aims, an evaluation is performed of all the sulphide-related data reported from the Forsmark site investigations /Laaksoharju et al. 2008/ and later monitoring campaigns, all of which are stored in the Sicada database. This evaluation shows that values from the Complete Chemical Characterisation (CCC) sampling are usually lower than those measured during

  6. ;Every dogma has its day': a personal look at carbon metabolism in photosynthetic bacteria.

    Science.gov (United States)

    Ormerod, John

    2003-01-01

    Dogmas are unscientific. What is perhaps the greatest biological dogma of all time, the 'unity of biochemistry' is, in the main, still having its day. According to present knowledge, the exceptions to this dogma are mere details when seen in relation to the biosystem as a whole. Nevertheless the exceptions are scientifically interesting and the understanding of them has led to a better comprehension of photosynthesis and ecology. Until the discovery of (14)C, photosynthetic CO(2) fixation was like a slightly opened black box. With (14)C in hand scientists mapped out the path of carbon in green plant photosynthesis in the course of a few years. The impressive reductive pentose phosphate cycle was almost immediately assumed to be universal in autotrophs, including anoxygenic phototrophs, in spite of the odd observation to the contrary. A new dogma was born and held the field for about two decades. Events began to turn when green sulfur bacteria were found to contain ferredoxin-coupled ketoacid-oxidoreductases. This led to the formulation of a novel CO(2)-fixing pathway, the reductive citric acid cycle, but its general acceptance required much work by many investigators. However, the ice had now been broken and after some years a third mechanism of CO(2) fixation was discovered, this time in Chloroflexus,and then a fourth in the same genus. One consequence of these discoveries is that it has become apparent that oxygen is an important factor that determines the kind of CO(2)-fixing mechanism an organism uses. With the prospect of the characterization of hordes of novel bacteria forecast by molecular ecologists we can expect further distinctive CO(2) fixation mechanisms to turn up.

  7. Removal heavy metals and sulphate from waste waters by sulphate-reducing bacteria

    Directory of Open Access Journals (Sweden)

    Kušnierová Mária

    2000-09-01

    Full Text Available This article is devoted to the process of bacterial sulphate reduction, which is used to removal of heavy metals and sulphate ions from waste waters.The life of animals and plants depends on the existence of microscopic organisms – microorganisms (MO, which play an important role in cycle changes of biogenic elements on the earth. The sulphur cycle in the nature is considered as one of the oldest and most significant biological systems (Fig. 1. The sulphate-reducing bacteria (SRB miss the assimilatory part of the cycle and produce sulphides. The microbial population of this dissimilatory part is called “sulfuretum”. The SRB can be found in anaerobic mud and sediments of freshwater, thermal or non-thermal sulphur springs, mining waters from sulphide deposits, oil deposits, sea and ocean beds, and in the gastrointestinal tract of man and animals. The SRB represent a group of chemoorganotrophic, strictly anaerobic and gramnegative bacteria, which exhibit a great morphological and physiological diversity. Despite of their considerable morphological variety, they have one property in common, which is the ability to utilise preferentially sulphates (occasionally sulphites, thiosulphates, tetrathionates as electron acceptors, which are reduced to sulphides, during anaerobic respiration. The electron donors in these processes are simple organic compounds as lactate, malate, etc.,(heterotrophically reduction or gaseous hydrogen (autotrophically reduction. SRB can produce a considerable amount of hydrogen sulphide, which reacts easily in aqueous solution with the cations of heavy metals, forming metal sulphides that have low solubility. The bacterial sulphate reduction can be used for the treatment of acid mine drainage waters, which is considered to be the major problem associated with mining activities.In order to remove heavy metals from waste waters, e.g., from galvanizing plants, mine waters (Smolnik, Šobov locality and metallurgic plants (works

  8. Interspecific competition changes photosynthetic and oxidative stress response of barley and barnyard grass to elevated CO2 and temperature

    Directory of Open Access Journals (Sweden)

    Irena Januskaitiene

    2018-03-01

    Full Text Available This work focuses on the investigation of competition interaction between C3 crop barley (Hordeum vulgare L. and C4 weed barnyard grass (Echinochloa crus-galli L. at 2 times higher than ambient [CO2] and +4 0C higher ambient temperature climate conditions. It was hypothesized that interspecific competition will change the response of the investigated plants to increased [CO2] and temperature. The obtained results showed that in the current climate conditions, a higher biomass and photosynthetic rate and a lower antioxidant activity were detected for barley grown under interspecific competition effect. While in the warmed climate and under competition conditions opposite results were detected: a higher water use efficiency, a higher photosynthetic performance, a lower dissipated energy flux and a lower antioxidant enzymes activity were detected for barnyard grass plants. This study highlights that in the future climate conditions, barnyard grass will become more efficient in performance of the photosynthetic apparatus and it will suffer from lower oxidative stress caused by interspecific competition as compared to barley.

  9. Nanophase Iron Oxides as an Ultraviolet Sunscreen for Ancient Photosynthetic Microbes: A Possible Link Between Early Organisms, Banded-Iron Formations, and the Oxygenation of the Atmosphere

    Science.gov (United States)

    Bishop, Janice L.; Rothschild, Lynn J.; Rothschild, Lynn J.; Rogoff, Dana A.

    2006-01-01

    We propose that nanophase iron oxide-bearing materials provided important niches for ancient photosynthetic microbes on the early Earth that ultimately led to the oxygenation of the Earth s atmosphere and the formation of iron oxide deposits. Atmospheric oxygen and ozone attenuate UV radiation on the Earth today providing substantial protection for photosynthetic organisms. With ultraviolet radiation fluxes likely to have been even higher on the early Earth than today, accessing solar radiation was particularly risky for early organisms. Yet, we know that photosynthesis arose then and played a critical role in subsequent evolution. Of primary importance was protection at approx.250-290 nm, where peak nucleic acid (approx.260 nm) and protein (approx.280 nm) absorptions occur. Nanophase ferric oxide/oxyhydroxide minerals absorb, and thus block, the lethal UV radiation, while transmitting light through much of the visible and near-infrared regions of interest to photosynthesis (400 to 1100 nm). Further, they were available in early environments, and are synthesized by many organisms. Based on ferric oxide/oxyhydroxide spectral properties, likely geologic processes, and the results of experiments with the photosynthetic organisms, Euglena sp. and Chlumydomonus reinhardtii, we propose a scenario where photosynthesis, and ultimately the oxygenation of the atmosphere, depended on the protection of early microbes by nanophase ferric oxides/oxyhydroxides. The results of this study are also applicable to other potentially habitable iron-bearing planetary bodies because of the evolutionary pressure to utilize solar radiation when available as an energy source.

  10. Application of ZnO Nanoparticle as Sulphide Gas Sensor Using UV/VIS/NIR-Spectrophotometer

    International Nuclear Information System (INIS)

    Juliasih, N; Buchari; Noviandri, I

    2017-01-01

    The nanoparticle of metal oxides has great unique characteristics that applicable to the wide industrial as sensors and catalysts for reducing environmental pollution. Sulphide gas monitors and detectors are required for assessing safety aspects, due to its toxicity level. A thin film of ZnO as the sulphide gas sensor was synthesised by the simple method of chemical liquid deposition with variation of annealing temperature from 200 ºC to 500 ºC, and characterised by Scanning Electron Microscope (SEM), X-Ray Diffraction (XRD), and UV/VIS/NIR-Spectrophotometer. Characterization studies showed nanoparticle size from the range 62 – 92 nm of diameters. The application this ZnO thin film to sulfide gas, detected by UV/VIS/NIR Spectrophotometer with diffuse reflectance, showed specific chemical reaction by the shifting of maximum % Reflectance peak. The gas sensing using this method is applicable at room. (paper)

  11. Sulphide phases in Y zeolite for hydro-treatment reactions; Phase sulfures dans une zeolithe Y pour l'hydrotraitement

    Energy Technology Data Exchange (ETDEWEB)

    Leyrit, P

    1999-06-28

    Several types of single (Mo, Co, Pd, Pt) or binary (MoCo, PdCo, PtCo) sulphides phases supported on a HY zeolite were studied. The catalysts were first prepared and characterised in the oxide form. Their reactivity was then evaluated in toluene hydrogenation and 4.6-dimethyl-dibenzo-thiophene hydro-desulfurization reactions. Characterisation of sulphide phases supported on HY zeolite was carried out by elemental analysis, X-Ray Diffraction (XRD), Transmission Electron Microscopy and Scanning Transmission Electron Microscopy (STEM), Extended X-Ray Absorption Fine Structure (EXAFS) and Temperature Programmed Reduction coupled with HS analysis. The results show that. compared with alumina supported catalysts, zeolite used as a support enables extremely active catalysts to be obtained. It appears in particular that molybdenum sulphide phases inside the zeolite have a very high intrinsic activity at low molybdenum content. This activity is attributed to highly dispersed molybdenum sulphide phases differing from MoS{sub 2} slabs and probably present as clusters. The influence of cobalt depends of its concentration. Thus at low loadings cobalt has a strong negative effect. It has been shown, in the molybdenum case, that cobalt interaction leads to an increase in the sulphur content of the molybdenum phases. At higher cobalt loading, the formation of a mixed phase is possible but the degree of promotion remains limited. This work emphasises the advantages of using zeolite supported sulphide phases, and especially Mo and Pd phases, in the hydro-treatment reactions. It seems however that single phases present a greater interest than binary phases. (author)

  12. Non-thermal plasma mills bacteria: Scanning electron microscopy observations

    International Nuclear Information System (INIS)

    Lunov, O.; Churpita, O.; Zablotskii, V.; Jäger, A.; Dejneka, A.; Deyneka, I. G.; Meshkovskii, I. K.; Syková, E.; Kubinová, Š.

    2015-01-01

    Non-thermal plasmas hold great promise for a variety of biomedical applications. To ensure safe clinical application of plasma, a rigorous analysis of plasma-induced effects on cell functions is required. Yet mechanisms of bacteria deactivation by non-thermal plasma remain largely unknown. We therefore analyzed the influence of low-temperature atmospheric plasma on Gram-positive and Gram-negative bacteria. Using scanning electron microscopy, we demonstrate that both Gram-positive and Gram-negative bacteria strains in a minute were completely destroyed by helium plasma. In contrast, mesenchymal stem cells (MSCs) were not affected by the same treatment. Furthermore, histopathological analysis of hematoxylin and eosin–stained rat skin sections from plasma–treated animals did not reveal any abnormalities in comparison to control ones. We discuss possible physical mechanisms leading to the shred of bacteria under non-thermal plasma irradiation. Our findings disclose how helium plasma destroys bacteria and demonstrates the safe use of plasma treatment for MSCs and skin cells, highlighting the favorability of plasma applications for chronic wound therapy

  13. Interactions between colloidal silver and photosynthetic pigments located in cyanobacteria fragments and in solution.

    Science.gov (United States)

    Siejak, Przemysław; Frackowiak, Danuta

    2007-09-25

    Changes in the yield of the fluorescence emitted by pigments of photosynthetic organisms could be used for the establishment of the presence of some toxic substances. The presence of colloidal metals can be indicated by enhancement of pigments' emission as a result of plasmons generation. The spectra of the pigments of cyanobacterium Synechocystis located in the bacterium fragments and in solutions with and without colloidal silver additions have been measured. The quantum yield of the pigments' fluorescence in solution has been observed to increase at some wavelength of excitation, while the fluorescence of the pigments in the bacteria fragments has been only quenched as a consequence of interactions with colloidal silver particles. Close contact between pigment molecules located in bacteria fragments and silver particles is probably not possible. We plan in future to investigate the influence of other, more typical metal pollutants of water, using similar spectral methods and several other photosynthetic bacteria pigments, in solution, in cell fragments and in the whole bacteria organisms.

  14. Effects of dissolved oxygen concentration on photosynthetic bacteria wastewater treatment: Pollutants removal, cell growth and pigments production.

    Science.gov (United States)

    Meng, Fan; Yang, Anqi; Zhang, Guangming; Wang, Hangyao

    2017-10-01

    Dissolved oxygen (DO) is an important parameter in photosynthetic bacteria (PSB) wastewater treatment. This study set different DO levels and detected the pollutants removal, PSB growth and pigments production. Results showed that DO significantly influenced the performances of PSB wastewater treatment process. The highest COD (93%) and NH 3 -N removal (83%) was achieved under DO of 4-8mg/L, but DO of 2-4mg/L was recommended considering the aeration cost. PSB biomass reached 1645mg/L under DO of 4-8mg/L with satisfying co-enzyme Q10 content. The biomass yield was relatively stable at all DO levels. For bacteriochlorophyll and carotenoids, DO>1mg/L could satisfy their production. On the other hand, DOpigments production occurred at 24h; biomass reached peak at 48h; and the optimal time for pollutants removal was 72h. Copyright © 2017 Elsevier Ltd. All rights reserved.

  15. Role of copper oxides in contact killing of bacteria.

    Science.gov (United States)

    Hans, Michael; Erbe, Andreas; Mathews, Salima; Chen, Ying; Solioz, Marc; Mücklich, Frank

    2013-12-31

    The potential of metallic copper as an intrinsically antibacterial material is gaining increasing attention in the face of growing antibiotics resistance of bacteria. However, the mechanism of the so-called "contact killing" of bacteria by copper surfaces is poorly understood and requires further investigation. In particular, the influences of bacteria-metal interaction, media composition, and copper surface chemistry on contact killing are not fully understood. In this study, copper oxide formation on copper during standard antimicrobial testing was measured in situ by spectroscopic ellipsometry. In parallel, contact killing under these conditions was assessed with bacteria in phosphate buffered saline (PBS) or Tris-Cl. For comparison, defined Cu2O and CuO layers were thermally generated and characterized by grazing incidence X-ray diffraction. The antibacterial properties of these copper oxides were tested under the conditions used above. Finally, copper ion release was recorded for both buffer systems by inductively coupled plasma atomic absorption spectroscopy, and exposed copper samples were analyzed for topographical surface alterations. It was found that there was a fairly even growth of CuO under wet plating conditions, reaching 4-10 nm in 300 min, but no measurable Cu2O was formed during this time. CuO was found to significantly inhibit contact killing, compared to pure copper. In contrast, thermally generated Cu2O was essentially as effective in contact killing as pure copper. Copper ion release from the different surfaces roughly correlated with their antibacterial efficacy and was highest for pure copper, followed by Cu2O and CuO. Tris-Cl induced a 10-50-fold faster copper ion release compared to PBS. Since the Cu2O that primarily forms on copper under ambient conditions is as active in contact killing as pure copper, antimicrobial objects will retain their antimicrobial properties even after oxide formation.

  16. Indicator minerals as guides to base metal sulphide mineralisation ...

    Indian Academy of Sciences (India)

    Zn-bearing minerals that act as indicator minerals for base metal sulphide mineralization from the Proterozoic Betul Belt,central India with special emphasis on their genetic significance have been discussed.Sulphide mineralisation is hosted by the felsic volcanic rocks and has similarities with volcanic-hosted massive ...

  17. SR-Site - sulphide content in the groundwater at Laxemar

    Energy Technology Data Exchange (ETDEWEB)

    Tullborg, E-L (Terralogica, Graabo (Sweden)); Smellie, J. (Conterra, Uppsala (Sweden)); Nilsson, A-Ch (Geosigma, Uppsala (Sweden)); Gimeno, M.J.; Auque, L.F. (Univ. of Zaragoza (Spain)); Wallin, B. (Geokema, Lidingoe (Sweden)); Bruechert, V. (Stockholm Univ. (Sweden)); Molinero, J. (Amphos21, Barcelona (Spain))

    2010-12-15

    Sulphide concentrations in groundwater play a key role in the long term reliability of the metal canisters containing the radioactive waste within a disposal facility for nuclear waste. This is because sulphide in the groundwaters circulating in the vicinity of the deposition tunnels can react with copper in the canisters causing corrosion and therefore reducing their expected lifetime; in a worst case scenario erosion of the bentonite buffer material will expose the canister more rapidly to the fracture groundwater. Sulphide in the groundwater is predominantly microbially produced and thereby controlled by the content of oxidised sulphur sources, organics (carbon sources), reductants (mainly Fe(II), DOC, H{sub 2} and CH{sub 4}), and also flow. In addition, achieved saturation in respect to amorphous Fe-monosulphide will control the possible maximum values and thus limit the Fe2+ and S2- values in the groundwater. The aim of this report is to assess realistic, representative and reliable sulphide groundwater concentrations at present conditions in Laxemar to be considered for use in (future) safety assessments. To achieve this, an evaluation is performed of all the sulphide related data reported from the Laxemar site investigations /Laaksoharju et al. 2009/ and later monitoring campaigns, all of which are stored in the Sicada database. This evaluation shows that values from the Complete Chemical Characterisation (CCC) (i.e. in situ sampling from one or more borehole sections using mobile equipment) are usually lower than those measured during the monitoring phase (i.e. in situ sampling from one borehole section using permanently installed equipment). An exception is borehole KLX01, where values generally lie within the same range as the monitoring samples. For most of the CCC and monitoring sections the last sample in the time series is suggested as representing the 'best possible' sulphide value. When both initial values from CCC (or samples taken with

  18. SR-Site - sulphide content in the groundwater at Laxemar

    International Nuclear Information System (INIS)

    Tullborg, E-L; Smellie, J.; Nilsson, A-Ch; Gimeno, M.J.; Auque, L.F.; Wallin, B.; Bruechert, V.; Molinero, J.

    2010-12-01

    Sulphide concentrations in groundwater play a key role in the long term reliability of the metal canisters containing the radioactive waste within a disposal facility for nuclear waste. This is because sulphide in the groundwaters circulating in the vicinity of the deposition tunnels can react with copper in the canisters causing corrosion and therefore reducing their expected lifetime; in a worst case scenario erosion of the bentonite buffer material will expose the canister more rapidly to the fracture groundwater. Sulphide in the groundwater is predominantly microbially produced and thereby controlled by the content of oxidised sulphur sources, organics (carbon sources), reductants (mainly Fe(II), DOC, H 2 and CH 4 ), and also flow. In addition, achieved saturation in respect to amorphous Fe-monosulphide will control the possible maximum values and thus limit the Fe 2+ and S 2- values in the groundwater. The aim of this report is to assess realistic, representative and reliable sulphide groundwater concentrations at present conditions in Laxemar to be considered for use in (future) safety assessments. To achieve this, an evaluation is performed of all the sulphide related data reported from the Laxemar site investigations /Laaksoharju et al. 2009/ and later monitoring campaigns, all of which are stored in the Sicada database. This evaluation shows that values from the Complete Chemical Characterisation (CCC) (i.e. in situ sampling from one or more borehole sections using mobile equipment) are usually lower than those measured during the monitoring phase (i.e. in situ sampling from one borehole section using permanently installed equipment). An exception is borehole KLX01, where values generally lie within the same range as the monitoring samples. For most of the CCC and monitoring sections the last sample in the time series is suggested as representing the 'best possible' sulphide value. When both initial values from CCC (or samples taken with the hydrotest

  19. Oxidative Stress Parameters in Saliva and Its Association with Periodontal Disease and Types of Bacteria.

    Science.gov (United States)

    Almerich-Silla, Jose Manuel; Montiel-Company, Jose María; Pastor, Sara; Serrano, Felipe; Puig-Silla, Miriam; Dasí, Francisco

    2015-01-01

    To determine the association between oxidative stress parameters with periodontal disease, bleeding, and the presence of different periodontal bacteria. A cross-sectional study in a sample of eighty-six patients, divided into three groups depending on their periodontal status. Thirty-three with chronic periodontitis, sixteen with gingivitis, and thirty-seven with periodontal healthy as control. Oxidative stress biomarkers (8-OHdG and MDA), total antioxidant capacity (TAOC), and the activity of two antioxidant enzymes (GPx and SOD) were determined in saliva. Subgingival plaque samples were obtained from the deepest periodontal pocket and PCR was used to determine the presence of the 6 fimA genotypes of Porphyromonas gingivalis, Aggregatibacter actinomycetemcomitans, Tannerella forsythia, and Treponema denticola. Periodontal disease was found to be associated with increased oxidative stress parameter levels. These levels rose according to the number and type of different periodontal bacteria found in the periodontal pockets. The presence of different types of periodontal bacteria is predictive independent variables in linear regresion models of oxidative stress parameters as dependent variable, above all 8-OHdG. Oxidative stress parameter levels are correlated with the presence of different types of bacteria. Determination of these levels and periodontal bacteria could be a potent tool for controlling periodontal disease development.

  20. Oxygen concentration inside a functioning photosynthetic cell.

    Science.gov (United States)

    Kihara, Shigeharu; Hartzler, Daniel A; Savikhin, Sergei

    2014-05-06

    The excess oxygen concentration in the photosynthetic membranes of functioning oxygenic photosynthetic cells was estimated using classical diffusion theory combined with experimental data on oxygen production rates of cyanobacterial cells. The excess oxygen concentration within the plesiomorphic cyanobacterium Gloeobactor violaceus is only 0.025 μM, or four orders of magnitude lower than the oxygen concentration in air-saturated water. Such a low concentration suggests that the first oxygenic photosynthetic bacteria in solitary form could have evolved ∼2.8 billion years ago without special mechanisms to protect them against reactive oxygen species. These mechanisms instead could have been developed during the following ∼500 million years while the oxygen level in the Earth's atmosphere was slowly rising. Excess oxygen concentrations within individual cells of the apomorphic cyanobacteria Synechocystis and Synechococcus are 0.064 and 0.25 μM, respectively. These numbers suggest that intramembrane and intracellular proteins in isolated oxygenic photosynthetic cells are not subjected to excessively high oxygen levels. The situation is different for closely packed colonies of photosynthetic cells. Calculations show that the excess concentration within colonies that are ∼40 μm or larger in diameter can be comparable to the oxygen concentration in air-saturated water, suggesting that species forming colonies require protection against reactive oxygen species even in the absence of oxygen in the surrounding atmosphere. Copyright © 2014 Biophysical Society. Published by Elsevier Inc. All rights reserved.

  1. Surface mapping and drilling of extinct seafloor massive sulphide deposits (eSMS) from the TAG Hydrothermal Field, 26oN: A tale of two `Jaspers'

    Science.gov (United States)

    Stobbs, I. J.; Lusty, P.; Petersen, S.; Murton, B. J.

    2017-12-01

    Two extinct seafloor massive sulphide (eSMS) deposits within the TAG hydrothermal field, 26oN, mid-Atlantic ridge, were mapped and drilled: Southern Mound and the newly discovered `Rona Mound'. Surface mapping was undertaken by combining high definition video footage and high resolution bathymetry to interpret surface geological and geomorphological features. Drill core was recovered using the BGS RD2 robotic drilling rig. Surface mapping of the mounds revealed a superficial cover of carbonate and iron-oxyhydroxides sediments, observed to directly overly oxide coated sulphide material within fault scarps, which dissect the flanks of both mounds. Drilling at the summits of the mounds revealed similar stratigraphy to the mapping, with the addition of a coherent and dense layer of red-coloured silica-rich `jasper', up to 3m thick, underlying the sediments and overlying unoxidised massive sulphides. The jasper mineralogy is dominated by silica, with minor iron oxides and rare disseminated sulphides. It displays a range of complex textures including filamentous and dendritic iron oxides often coated in silica. Drill core samples show the material to be porous, but relatively impermeable. Strong and positive Eu (REE) anomalies indicates a hydrothermal origin with little evidence of a seawater signature (lack of negative Ce anomaly). Silica precipitation is associated with low temperature hydrothermal activity, chert and jasper materials are locally present within the nearby hydrothermally active TAG mound and are more widespread at low-temperature diffuse hydrothermal sites such as within the MESO field. We interpret the `jasper' layers to be a common product, formed during the waning, low temperature, stage of the hydrothermal cycle which may form an impermeable and resistant `cap' that protects the underlying massive sulphide ore body from oxidation and dissolution. The formation of a `jasper cap' could act automatically to preserve eSMS deposits when hydrothermal

  2. Amine binding and oxidation at the catalytic site for photosynthetic water oxidation

    Science.gov (United States)

    Ouellette, Anthony J. A.; Anderson, Lorraine B.; Barry, Bridgette A.

    1998-01-01

    Photosynthetic water oxidation occurs at the Mn-containing catalytic site of photosystem II (PSII). By the use of 14C-labeled amines and SDS-denaturing PAGE, covalent adducts derived from primary amines and the PSII subunits, CP47, D2/D1, and the Mn-stabilizing protein, can be observed. When PSII contains the 18- and 24-kDa extrinsic proteins, which restrict access to the active site, no 14C labeling is obtained. NaCl, but not Na2SO4, competes with 14C labeling in Mn-containing PSII preparations, and the concentration dependence of this competition parallels the activation of oxygen evolution. Formation of 14C-labeled adducts is observed in the presence or in the absence of a functional manganese cluster. However, no significant Cl− effect on 14C labeling is observed in the absence of the Mn cluster. Isolation and quantitation of the 14C-labeled aldehyde product, produced from [14C]benzylamine, gives yields of 1.8 ± 0.3 mol/mol PSII and 2.9 ± 0.2 mol/mol in Mn-containing and Mn-depleted PSII, respectively. The corresponding specific activities are 0.40 ± 0.07 μmol(μmol PSII-hr)−1 and 0.64 ± 0.04 μmol(μmol PSII-hr)−1. Cl− suppresses the production of [14C]benzaldehyde in Mn-containing PSII, but does not suppress the production in Mn-depleted preparations. Control experiments show that these oxidation reactions do not involve the redox-active tyrosines, D and Z. Our results suggest the presence of one or more activated carbonyl groups in protein subunits that form the active site of PSII. PMID:9482863

  3. Toxicity and transformation of graphene oxide and reduced graphene oxide in bacteria biofilm.

    Science.gov (United States)

    Guo, Zhiling; Xie, Changjian; Zhang, Peng; Zhang, Junzhe; Wang, Guohua; He, Xiao; Ma, Yuhui; Zhao, Bin; Zhang, Zhiyong

    2017-02-15

    Impact of graphene based material (GNMs) on bacteria biofilm has not been well understood yet. In this study, we compared the impact of graphene oxide (GO) and reduced graphene oxide (rGO) on biofilm formation and development in Luria-Bertani (LB) medium using Escherichia coli and Staphylococcus aureus as models. GO significantly enhanced the cell growth, biofilm formation, and biofilm development even up to a concentration of 500mg/L. In contrast, rGO (≥50mg/L) strongly inhibited cell growth and biofilm formation. However, the inhibitory effects of rGO (50mg/L and 100mg/L) were attenuated in the mature phase (>24h) and eliminated at 48h. GO at 250mg/L decreased the reactive oxygen species (ROS) levels in biofilm and extracellular region at mature phase. ROS levels were significantly increased by rGO at early phase, while they returned to the same levels as control at mature phase. These results suggest that oxidative stress contributed to the inhibitory effect of rGO on bacterial biofilm. We further found that supplement of extracellular polymeric substances (EPS) in the growth medium attenuated the inhibitory effect of rGO on the growth of developed biofilm. XPS results showed that rGO were oxidized to GO which can enhance the bacterial growth. We deduced that the elimination of the toxicity of rGO at mature phase was contributed by EPS protection and the oxidation of rGO. This study provides new insights into the interaction of GNMs with bacteria biofilm. Copyright © 2016 Elsevier B.V. All rights reserved.

  4. Co-existence of Anaerobic Ammonium Oxidation Bacteria and Denitrifying Anaerobic Methane Oxidation Bacteria in Sewage Sludge: Community Diversity and Seasonal Dynamics

    DEFF Research Database (Denmark)

    Xu, Sai; Lu, Wenjing; Mustafa, Muhammad Farooq

    2017-01-01

    Anaerobic ammonium oxidation (ANAMMOX) and denitrifying anaerobic methane oxidation (DAMO) have been recently discovered as relevant processes in the carbon and nitrogen cycles of wastewater treatment plants. In this study, the seasonal dynamics of ANAMMOX and DAMO bacterial community structures......, and an unknown cluster was primarily detected in autumn and winter. Similar patterns of seasonal variation in the community structure of DAMO bacteria were also observed. Group B was the dominant in spring and summer, whereas in autumn and winter, group A and group B presented almost the same proportion...

  5. Ammonia effect on hydrogenotrophic methanogens and syntrophic acetate oxidizing bacteria

    DEFF Research Database (Denmark)

    Wang, Han; Fotidis, Ioannis; Angelidaki, Irini

    Substrates that contain high ammonia levels can cause inhibition on anaerobic digestion process and unstable biogas production. The aim of the current study was to assess the effects of different ammonia levels on pure strains of (syntrophic acetate oxidizing) SAO bacteria and hydrogenotrophic...... methanogens. Two pure strains of hydrogenotrophic methanogens (i.e: Methanoculleus bourgensis and Methanoculleus thermophiles) and two pure strains of SAO bacteria (i.e: Tepidanaerobacter acetatoxydans and Thermacetogenium phaeum) were inoculated under four different ammonia (0.26, 3, 5 and 7g NH4+-N......, the total incubation periods of hydrogenotrophic methanogens were significantly shorter compared to the SAO bacteria incubation periods. Thus, it seems that hydrogenotrophic methanogens could be equally, if not more, tolerant to high ammonia levels compared to SAO bacteria....

  6. Biological treatment of acid mine water: selection of a biomass population enriched in sulphate-reducing bacteria; Tratamiento biologico de aguas acidas de mineria: seleccion de una poblacion bacteriana enriquecida en bacterias sulfatoreductoras

    Energy Technology Data Exchange (ETDEWEB)

    Duran Barrantes, M. M.; Jimenez Rodriguez, A. M.; Martel Villagran, F. J.

    2001-07-01

    The purpose of this work is to study the biological sulphate reduction. AYESA (Aguas y Estructuras, S. A.) is developing the technical attendance. This study is being demonstrated under the Acid Water Treatment Program, conducted by the Consejeria del Medio Ambiente (Junta de Andalucia). Acid mine drainage is one of the most serious environmental problems facing the metal mining industry. This wastewater is formed when sulphide ores undergo chemical and biological oxidation processes and is characterized by low pH-values and high levels of sulphate and metals. The effect of stimuling bacteria sulphate reduction in such systems in order to improve water quality was examined in a laboratory scale experiment, in 250 mL, magnetically stirred, batch, anaerobic reactors, to 25 degree centigree. (Author) 11 refs.

  7. Prediction and optimisation of Pb/Zn/Fe sulphide scales in gas production fields

    Energy Technology Data Exchange (ETDEWEB)

    Dyer, Sarah; Orski, Karine; Menezes, Carlos; Heath, Steve; MacPherson, Calum; Simpson, Caroline; Graham, Gordon

    2006-03-15

    Lead, zinc and iron sulphide scales are known to be a particular issue with gas production fields, particularly those producing from HP/HT reservoirs. However the prediction of sulphide scale and the methodologies available for their laboratory assessment are not as well developed as those for the more conventional sulphate and carbonate scales. This work examines a particular sulphide scaling regime from a North Sea high temperature gas condensate production field containing only 0.8ppm of sulphide ions. Sulphide scales were identified in the production system which was shown to be a mixture of lead and zinc sulphide, primarily lead sulphide. This formed as a result of cooling during production resulting in the over saturation of these minerals. This paper describes scale prediction and modified laboratory test protocols used to re-create the scales formed in the field prior to chemical performance testing. From the brine composition, scale prediction identified that the major scales that could be formed were calcium carbonate, iron carbonate, iron sulphide, lead sulphide and zinc sulphide. In addition, modification of the brine compositions led to prediction of primarily one scale or the other. Given the predicted over saturation of various minerals, preliminary laboratory tests were therefore conducted in order to ensure that the scale formed under laboratory conditions was representative of the field scale. Laboratory protocols were therefore developed to ensure that the scales formed in fully anaerobic dynamic performance tests and static performance tests were similar to those encountered in the field. The paper compares results from field analysis, scale predictions and laboratory scale formation tests using newly developed test protocols and shows differences between prediction and laboratory data. The paper therefore demonstrates the importance of ensuring that the correct scale is formed under laboratory test conditions and also indicates some potential

  8. Ammonia-oxidizing bacteria: A model for molecular microbial ecology

    NARCIS (Netherlands)

    Kowalchuk, G.A.; Stephen, J.R.

    2001-01-01

    The eutrophication of many ecosystems in recent decades has led to an increased interest in the ecology of nitrogen transformation. Chemolitho-autotrophic ammonia-oxidizing bacteria are responsible for the rate-limiting step of nitrification in a wide variety of environments, making them important

  9. Tree Species with Photosynthetic Stems Have Greater Nighttime Sap Flux

    Directory of Open Access Journals (Sweden)

    Xia Chen

    2018-01-01

    Full Text Available An increasing body of evidence has shown that nighttime sap flux occurs in most plants, but the physiological implications and regulatory mechanism are poorly known. The significance of corticular photosynthesis has received much attention during the last decade, however, the knowledge of the relationship between corticular photosynthesis and nocturnal stem sap flow is limited at present. In this study, we divided seven tree species into two groups according to different photosynthetic capabilities: trees of species with (Castanopsis hystrix, Michelia macclurei, Eucalyptus citriodora, and Eucalyptus grandis × urophylla and without (Castanopsis fissa, Schima superba, and Acacia auriculiformis photosynthetic stems, and the sap flux (Js and chlorophyll fluorescence parameters for these species were measured. One-way ANOVA analysis showed that the Fv/Fm (Maximum photochemical quantum yield of PSII and ΦPSII (effective photochemical quantum yield of PSII values were lower in non-photosynthetic stem species compared to photosynthetic stem species. The linear regression analysis showed that Js,d (daytime sap flux and Js,n (nighttime sap flux of non-photosynthetic stem species was 87.7 and 60.9% of the stem photosynthetic species. Furthermore, for a given daytime transpiration water loss, total nighttime sap flux was higher in species with photosynthetic stems (SlopeSMA = 2.680 than in non-photosynthetic stems species (SlopeSMA = 1.943. These results mean that stem corticular photosynthesis has a possible effect on the nighttime water flow, highlighting the important eco-physiological relationship between nighttime sap flux and corticular photosynthesis.

  10. Tree Species with Photosynthetic Stems Have Greater Nighttime Sap Flux

    Science.gov (United States)

    Chen, Xia; Gao, Jianguo; Zhao, Ping; McCarthy, Heather R.; Zhu, Liwei; Ni, Guangyan; Ouyang, Lei

    2018-01-01

    An increasing body of evidence has shown that nighttime sap flux occurs in most plants, but the physiological implications and regulatory mechanism are poorly known. The significance of corticular photosynthesis has received much attention during the last decade, however, the knowledge of the relationship between corticular photosynthesis and nocturnal stem sap flow is limited at present. In this study, we divided seven tree species into two groups according to different photosynthetic capabilities: trees of species with (Castanopsis hystrix, Michelia macclurei, Eucalyptus citriodora, and Eucalyptus grandis × urophylla) and without (Castanopsis fissa, Schima superba, and Acacia auriculiformis) photosynthetic stems, and the sap flux (Js) and chlorophyll fluorescence parameters for these species were measured. One-way ANOVA analysis showed that the Fv/Fm (Maximum photochemical quantum yield of PSII) and ΦPSII (effective photochemical quantum yield of PSII) values were lower in non-photosynthetic stem species compared to photosynthetic stem species. The linear regression analysis showed that Js,d (daytime sap flux) and Js,n (nighttime sap flux) of non-photosynthetic stem species was 87.7 and 60.9% of the stem photosynthetic species. Furthermore, for a given daytime transpiration water loss, total nighttime sap flux was higher in species with photosynthetic stems (SlopeSMA = 2.680) than in non-photosynthetic stems species (SlopeSMA = 1.943). These results mean that stem corticular photosynthesis has a possible effect on the nighttime water flow, highlighting the important eco-physiological relationship between nighttime sap flux and corticular photosynthesis. PMID:29416547

  11. Sulphide phases in Y zeolite for hydro-treatment reactions; Phase sulfures dans une zeolithe Y pour l'hydrotraitement

    Energy Technology Data Exchange (ETDEWEB)

    Leyrit, P.

    1999-06-28

    Several types of single (Mo, Co, Pd, Pt) or binary (MoCo, PdCo, PtCo) sulphides phases supported on a HY zeolite were studied. The catalysts were first prepared and characterised in the oxide form. Their reactivity was then evaluated in toluene hydrogenation and 4.6-dimethyl-dibenzo-thiophene hydro-desulfurization reactions. Characterisation of sulphide phases supported on HY zeolite was carried out by elemental analysis, X-Ray Diffraction (XRD), Transmission Electron Microscopy and Scanning Transmission Electron Microscopy (STEM), Extended X-Ray Absorption Fine Structure (EXAFS) and Temperature Programmed Reduction coupled with HS analysis. The results show that. compared with alumina supported catalysts, zeolite used as a support enables extremely active catalysts to be obtained. It appears in particular that molybdenum sulphide phases inside the zeolite have a very high intrinsic activity at low molybdenum content. This activity is attributed to highly dispersed molybdenum sulphide phases differing from MoS{sub 2} slabs and probably present as clusters. The influence of cobalt depends of its concentration. Thus at low loadings cobalt has a strong negative effect. It has been shown, in the molybdenum case, that cobalt interaction leads to an increase in the sulphur content of the molybdenum phases. At higher cobalt loading, the formation of a mixed phase is possible but the degree of promotion remains limited. This work emphasises the advantages of using zeolite supported sulphide phases, and especially Mo and Pd phases, in the hydro-treatment reactions. It seems however that single phases present a greater interest than binary phases. (author)

  12. Toward understanding as photosynthetic biosignatures: light harvesting and energy transfer calculation

    Science.gov (United States)

    Komatsu, Y.; Umemura, M.; Shoji, M.; Shiraishi, K.; Kayanuma, M.; Yabana, K.

    2014-03-01

    Among several proposed biosignatures, red edge is a direct evidence of photosynthetic life if it is detected (Kiang et al 2007). Red edge is a sharp change in reflectance spectra of vegetation in NIR region (about 700-750 nm). The sign of red edge is observed by Earthshine or remote sensing (Wolstencroft & Raven 2002, Woolf et al 2002). But, why around 700-750 nm? The photosynthetic organisms on Earth have evolved to optimize the sunlight condition. However, if we consider about photosynthetic organism on extrasolar planets, they should have developed to utilize the spectra of its principal star. Thus, it is not strange even if it shows different vegetation spectra. In this study, we focused on the light absorption mechanism of photosynthetic organisms on Earth and investigated the fundamental properties of the light harvesting mechanisms, which is the first stage for the light absorption. Light harvesting complexes contain photosynthetic pigments like chlorophylls. Effective light absorption and the energy transfer are accomplished by the electronic excitations of collective photosynthetic pigments. In order to investigate this mechanism, we constructed an energy transfer model by using a dipole-dipole approximation for the interactions between electronic excitations. Transition moments and transition energies of each pigment are calculated at the time-dependent density functional theory (TDDFT) level (Marques & Gross 2004). Quantum dynamics simulation for the excitation energy transfer was calculated by the Liouvelle's equation. We adopted the model to purple bacteria, which has been studied experimentally and known to absorb lower energy. It is meaningful to focus on the mechanism of this bacteria, since in the future mission, M planets will become a important target. We calculated the oscillator strengths in one light harvesting complex and confirmed the validity by comparing to the experimental data. This complex is made of an inner and an outer ring. The

  13. Anaerobic Ammonium-Oxidizing Bacteria in Cow Manure Composting.

    Science.gov (United States)

    Wang, Tingting; Cheng, Lijun; Zhang, Wenhao; Xu, Xiuhong; Meng, Qingxin; Sun, Xuewei; Liu, Huajing; Li, Hongtao; Sun, Yu

    2017-07-28

    Composting is widely used to transform waste into valuable agricultural organic fertilizer. Anaerobic ammonium-oxidizing (anammox) bacteria play an important role in the global nitrogen cycle, but their role in composting remains poorly understood. In the present study, the community structure, diversity, and abundance of anammox bacteria were analyzed using cloning and sequencing methods by targeting the 16S rRNA gene and the hydrazine oxidase gene ( hzo ) in samples isolated from compost produced from cow manure and rice straw. A total of 25 operational taxonomic units were classified based on 16S rRNA gene clone libraries, and 14 operational taxonomic units were classified based on hzo gene clone libraries. The phylogenetic tree analysis of the 16S rRNA gene and deduced HZO protein sequences from the corresponding encoding genes indicated that the majority of the obtained clones were related to the known anammox bacteria Candidatus "Brocadia," Candidatus "Kuenenia," and Candidatus "Scalindua." The abundances of anammox bacteria were determined by quantitative PCR, and between 2.13 × 10 5 and 1.15 × 10 6 16S rRNA gene copies per gram of compost were found. This study provides the first demonstration of the existence of anammox bacteria with limited diversity in cow manure composting.

  14. Metagenomic analysis of nitrate-reducing bacteria in the oral cavity: implications for nitric oxide homeostasis.

    Science.gov (United States)

    Hyde, Embriette R; Andrade, Fernando; Vaksman, Zalman; Parthasarathy, Kavitha; Jiang, Hong; Parthasarathy, Deepa K; Torregrossa, Ashley C; Tribble, Gena; Kaplan, Heidi B; Petrosino, Joseph F; Bryan, Nathan S

    2014-01-01

    The microbiota of the human lower intestinal tract helps maintain healthy host physiology, for example through nutrient acquisition and bile acid recycling, but specific positive contributions of the oral microbiota to host health are not well established. Nitric oxide (NO) homeostasis is crucial to mammalian physiology. The recently described entero-salivary nitrate-nitrite-nitric oxide pathway has been shown to provide bioactive NO from dietary nitrate sources. Interestingly, this pathway is dependent upon oral nitrate-reducing bacteria, since humans lack this enzyme activity. This pathway appears to represent a newly recognized symbiosis between oral nitrate-reducing bacteria and their human hosts in which the bacteria provide nitrite and nitric oxide from nitrate reduction. Here we measure the nitrate-reducing capacity of tongue-scraping samples from six healthy human volunteers, and analyze metagenomes of the bacterial communities to identify bacteria contributing to nitrate reduction. We identified 14 candidate species, seven of which were not previously believed to contribute to nitrate reduction. We cultivated isolates of four candidate species in single- and mixed-species biofilms, revealing that they have substantial nitrate- and nitrite-reduction capabilities. Colonization by specific oral bacteria may thus contribute to host NO homeostasis by providing nitrite and nitric oxide. Conversely, the lack of specific nitrate-reducing communities may disrupt the nitrate-nitrite-nitric oxide pathway and lead to a state of NO insufficiency. These findings may also provide mechanistic evidence for the oral systemic link. Our results provide a possible new therapeutic target and paradigm for NO restoration in humans by specific oral bacteria.

  15. Metagenomic analysis of nitrate-reducing bacteria in the oral cavity: implications for nitric oxide homeostasis.

    Directory of Open Access Journals (Sweden)

    Embriette R Hyde

    Full Text Available The microbiota of the human lower intestinal tract helps maintain healthy host physiology, for example through nutrient acquisition and bile acid recycling, but specific positive contributions of the oral microbiota to host health are not well established. Nitric oxide (NO homeostasis is crucial to mammalian physiology. The recently described entero-salivary nitrate-nitrite-nitric oxide pathway has been shown to provide bioactive NO from dietary nitrate sources. Interestingly, this pathway is dependent upon oral nitrate-reducing bacteria, since humans lack this enzyme activity. This pathway appears to represent a newly recognized symbiosis between oral nitrate-reducing bacteria and their human hosts in which the bacteria provide nitrite and nitric oxide from nitrate reduction. Here we measure the nitrate-reducing capacity of tongue-scraping samples from six healthy human volunteers, and analyze metagenomes of the bacterial communities to identify bacteria contributing to nitrate reduction. We identified 14 candidate species, seven of which were not previously believed to contribute to nitrate reduction. We cultivated isolates of four candidate species in single- and mixed-species biofilms, revealing that they have substantial nitrate- and nitrite-reduction capabilities. Colonization by specific oral bacteria may thus contribute to host NO homeostasis by providing nitrite and nitric oxide. Conversely, the lack of specific nitrate-reducing communities may disrupt the nitrate-nitrite-nitric oxide pathway and lead to a state of NO insufficiency. These findings may also provide mechanistic evidence for the oral systemic link. Our results provide a possible new therapeutic target and paradigm for NO restoration in humans by specific oral bacteria.

  16. Triplet states of carotenoids from photosynthetic bacteria studied by nanosecond ultraviolet and electron pulse irradiation

    International Nuclear Information System (INIS)

    Bensasson, R.; Land, E.J.; Maudinas, B.

    1976-01-01

    Absorptions of the triplet excited states of five carotenoids (15,15'-cis phytoene, all-trans phytoene, zeta-carotene, spheroidene and spirillox-anthin), extracted from the photosynthetic bacteria Rhodopseudomonas spheroides and Rhodospirillum rubrum, have been detected in solution using pulse radiolysis and laser flash photolysis. Triplet lifetimes, extinction coefficients, lowest energy levels and quantum efficiencies of formation have been determined. Comparison of the carotenoid triplet energy levels with that of O 2 ('Δsub(g)) suggests that spirilloxanthin, spheroidene and possibly also zeta-carotene, would be expected to protect against photodynamic action caused by O 2 ('Δsub(g)), but not cis or trans phytoene. The S → T intersystem crossing efficiencies of all five polyenes were found to be low, being a few per cent or less. In their protective role these triplet states can only therefore be effectively reached via energy transfer from another triplet, except in the case of O 2 (Δsub(g)). The low crossover efficiencies also mean that light absorbed in such carotenoids in their possible role as accessory pigments would not be wasted in crossing over to the triplet state. (author)

  17. Survival or revival: long-term preservation induces a reversible viable but non-culturable state in methane-oxidizing bacteria.

    Directory of Open Access Journals (Sweden)

    Sven Hoefman

    Full Text Available Knowledge on long-term preservation of micro-organisms is limited and research in the field is scarce despite its importance for microbial biodiversity and biotechnological innovation. Preservation of fastidious organisms such as methane-oxidizing bacteria (MOB has proven difficult. Most MOB do not survive lyophilization and only some can be cryopreserved successfully for short periods. A large-scale study was designed for a diverse set of MOB applying fifteen cryopreservation or lyophilization conditions. After three, six and twelve months of preservation, the viability (via live-dead flow cytometry and culturability (via most-probable number analysis and plating of the cells were assessed. All strains could be cryopreserved without a significant loss in culturability using 1% trehalose in 10-fold diluted TSB (TT as preservation medium and 5% DMSO as cryoprotectant. Several other cryopreservation and lyophilization conditions, all of which involved the use of TT medium, also allowed successful preservation but showed a considerable loss in culturability. We demonstrate here that most of these non-culturables survived preservation according to viability assessment indicating that preservation induces a viable but non-culturable (VBNC state in a significant fraction of cells. Since this state is reversible, these findings have major implications shifting the emphasis from survival to revival of cells in a preservation protocol. We showed that MOB cells could be significantly resuscitated from the VBNC state using the TT preservation medium.

  18. Tree Species with Photosynthetic Stems Have Greater Nighttime Sap Flux.

    Science.gov (United States)

    Chen, Xia; Gao, Jianguo; Zhao, Ping; McCarthy, Heather R; Zhu, Liwei; Ni, Guangyan; Ouyang, Lei

    2018-01-01

    An increasing body of evidence has shown that nighttime sap flux occurs in most plants, but the physiological implications and regulatory mechanism are poorly known. The significance of corticular photosynthesis has received much attention during the last decade, however, the knowledge of the relationship between corticular photosynthesis and nocturnal stem sap flow is limited at present. In this study, we divided seven tree species into two groups according to different photosynthetic capabilities: trees of species with ( Castanopsis hystrix, Michelia macclurei, Eucalyptus citriodora , and Eucalyptus grandis × urophylla ) and without ( Castanopsis fissa, Schima superba , and Acacia auriculiformis ) photosynthetic stems, and the sap flux ( J s ) and chlorophyll fluorescence parameters for these species were measured. One-way ANOVA analysis showed that the F v / F m (Maximum photochemical quantum yield of PSII) and Φ PSII (effective photochemical quantum yield of PSII) values were lower in non-photosynthetic stem species compared to photosynthetic stem species. The linear regression analysis showed that J s,d (daytime sap flux) and J s,n (nighttime sap flux) of non-photosynthetic stem species was 87.7 and 60.9% of the stem photosynthetic species. Furthermore, for a given daytime transpiration water loss, total nighttime sap flux was higher in species with photosynthetic stems (Slope SMA = 2.680) than in non-photosynthetic stems species (Slope SMA = 1.943). These results mean that stem corticular photosynthesis has a possible effect on the nighttime water flow, highlighting the important eco-physiological relationship between nighttime sap flux and corticular photosynthesis.

  19. Enhance wastewater biological treatment through the bacteria induced graphene oxide hydrogel.

    Science.gov (United States)

    Shen, Liang; Jin, Ziheng; Wang, Dian; Wang, Yuanpeng; Lu, Yinghua

    2018-01-01

    The interaction between bacteria and graphene-family materials like pristine graphene, graphene oxide (GO) and reduced graphene oxide (rGO) is such an elusive issue that its implication in environmental biotechnology is unclear. Herein, two kinds of self-assembled bio-rGO-hydrogels (BGHs) were prepared by cultivating specific Shewanella sp. strains with GO solution for the first time. The microscopic examination by SEM, TEM and CLSM indicated a porous 3D structure of BGHs, in which live bacteria firmly anchored and extracellular polymeric substances (EPS) abundantly distributed. Spectra of XRD, FTIR, XPS and Raman further proved that GO was reduced to rGO by bacteria along with the gelation process, which suggests a potential green technique to produce graphene. Based on the characterization results, four mechanisms for the BGH formation were proposed, i.e., stacking, bridging, rolling and cross-linking of rGO sheets, through the synergistic effect of activities and EPS from special bacteria. More importantly, the BGHs obtained in this study were found able to achieve unique cleanup performance that the counterpart free bacteria could not fulfill, as exemplified in Congo red decolorization and Cr(VI) bioreduction. These findings therefore enlighten a prospective application of graphene materials for the biological treatment of wastewaters in the future. Copyright © 2017 Elsevier Ltd. All rights reserved.

  20. Oxidation of pyrite: Consequences and significance

    Directory of Open Access Journals (Sweden)

    Dimitrijević Mile D.

    2002-01-01

    Full Text Available This paper presents the most important studies on the oxidation of pyrite particularly in aqueous solutions. The consequences of pyrite oxidation was examined, as well as its importance, from both the technical-technological and environmental points of view. The oxidation of pyrite was considered in two parts. The spontaneous oxidation of pyrite in nature was described in the first part, with this part comprising pyrite oxidation in deposits depots and mines. It is explained how way natural electrochemical processes lead to the decomposition of pyrite and other minerals associated with pyrite. The oxidation of pyrite occurring during technological processes such as grinding, flotation and leaching, was shown in the second part. Particular emphasis was placed on the oxidation of pyrite during leaching. This part includes the leaching of sulphide and oxide ores, the leaching of pyrite coal and the leaching of refractory gold-bearing ores (pressure oxidation, bacterial oxidation, oxidation by means of strong oxidants and the electrolysis of pyrite suspensions. Various mechanisms of pyrite oxidation and of the galvanic interaction of pyrite with other sulphide minerals are shown.

  1. Production of bioplastics and hydrogen gas by photosynthetic microorganisms

    Science.gov (United States)

    Yasuo, Asada; Masato, Miyake; Jun, Miyake

    1998-03-01

    Our efforts have been aimed at the technological basis of photosynthetic-microbial production of materials and an energy carrier. We report here accumulation of poly-(3-hydroxybutyrate) (PHB), a raw material of biodegradable plastics and for production of hydrogen gas, and a renewable energy carrier by photosynthetic microorganisms (tentatively defined as cyanobacteria plus photosynthetic bateria, in this report). A thermophilic cyanobacterium, Synechococcus sp. MA19 that accumulates PHB at more than 20% of cell dry wt under nitrogen-starved conditions was isolated and microbiologically identified. The mechanism of PHB accumulation was studied. A mesophilic Synechococcus PCC7942 was transformed with the genes encoding PHB-synthesizing enzymes from Alcaligenes eutrophus. The transformant accumulated PHB under nitrogen-starved conditions. The optimal conditions for PHB accumulation by a photosynthetic bacterium grown on acetate were studied. Hydrogen production by photosynthetic microorganisms was studied. Cyanobacteria can produce hydrogen gas by nitrogenase or hydrogenase. Hydrogen production mediated by native hydrogenase in cyanobacteria was revealed to be in the dark anaerobic degradation of intracellular glycogen. A new system for light-dependent hydrogen production was targeted. In vitro and in vivo coupling of cyanobacterial ferredoxin with a heterologous hydrogenase was shown to produce hydrogen under light conditions. A trial for genetic trasformation of Synechococcus PCC7942 with the hydrogenase gene from Clostridium pasteurianum is going on. The strong hydrogen producers among photosynthetic bacteria were isolated and characterized. Co-culture of Rhodobacter and Clostriumdium was applied to produce hydrogen from glucose. Conversely in the case of cyanobacteria, genetic regulation of photosynthetic proteins was intended to improve conversion efficiency in hydrogen production by the photosynthetic bacterium, Rhodobacter sphaeroides RV. A mutant acquired by

  2. Synthesis and shape control of copper tin sulphide nanocrystals and formation of gold-copper tin sulphide hybrid nanostructures

    International Nuclear Information System (INIS)

    Kruszynska, Marta; Parisi, Juergen; Kolny-Olesiak, Joanna

    2014-01-01

    Hexagonal prismatic Cu 3 SnS 4 nanoparticles and nanorods were synthesized by a hot-injection procedure. Changing the reaction conditions leads to the formation of different shapes. When oleylamine is used as a solvent, hexagonal prismatic particles are obtained, while a reaction in octadecene results in the formation of nanorods. The growth process of copper tin sulphide starts with the formation of djurleite copper sulphide seeds. Their reaction with Sn 4+ ions leads to the formation of Cu 3 SnS 4 . These Cu 3 SnS 4 nanocrystals form Au-Cu 3 SnS 4 hybrid nanostructures by reaction with gold seeds.

  3. Nitrogen source effects on the denitrifying anaerobic methane oxidation culture and anaerobic ammonium oxidation bacteria enrichment process.

    Science.gov (United States)

    Fu, Liang; Ding, Jing; Lu, Yong-Ze; Ding, Zhao-Wei; Zeng, Raymond J

    2017-05-01

    The co-culture system of denitrifying anaerobic methane oxidation (DAMO) and anaerobic ammonium oxidation (Anammox) has a potential application in wastewater treatment plant. This study explored the effects of permutation and combination of nitrate, nitrite, and ammonium on the culture enrichment from freshwater sediments. The co-existence of NO 3 - , NO 2 - , and NH 4 + shortened the enrichment time from 75 to 30 days and achieved a total nitrogen removal rate of 106.5 mg/L/day on day 132. Even though ammonium addition led to Anammox bacteria increase and a higher nitrogen removal rate, DAMO bacteria still dominated in different reactors with the highest proportion of 64.7% and the maximum abundance was 3.07 ± 0.25 × 10 8 copies/L (increased by five orders of magnitude) in the nitrite reactor. DAMO bacteria showed greater diversity in the nitrate reactor, and one was similar to M. oxyfera; DAMO bacteria in the nitrite reactor were relatively unified and similar to M. sinica. Interestingly, no DAMO archaea were found in the nitrate reactor. This study will improve the understanding of the impact of nitrogen source on DAMO and Anammox co-culture enrichment.

  4. Exogenous quinones inhibit photosynthetic electron transfer in Chloroflexus aurantiacus by specific quenching of the excited bacteriochlorophyll c antenna

    DEFF Research Database (Denmark)

    Frigaard, N-U; Tokita, S; Matsuura, K

    1999-01-01

    In the photosynthetic green filamentous bacterium Chloroflexus aurantiacus, excitation energy is transferred from a large bacteriochlorophyll (BChl) c antenna via smaller BChl a antennas to the reaction center. The effects of substituted 1,4-naphthoquinones on BChl c and BChl a fluorescence and o...... antenna. Our results provide a model system for studying the redox-dependent antenna quenching in green sulfur bacteria because the antennas in these bacteria inherently exhibit a sensitivity to O(2) similar to the quinone-supplemented cells of Cfx. aurantiacus....... and on flash-induced cytochrome c oxidation were studied in whole cells under aerobic conditions. BChl c fluorescence in a cell suspension with 5.4 microM BChl c was quenched to 50% by addition of 0.6 microM shikonin ((R)-2-(1-hydroxy-4-methyl-3-pentenyl)-5,8-dihydroxy-1, 4-naphthoquinone), 0.9 microM 5......-hydroxy-1,4-naphthoquinone, or 4 microM 2-acetyl-3-methyl-1,4-naphthoquinone. Between 25 and 100 times higher quinone concentrations were needed to quench BChl a fluorescence to a similar extent. These quinones also efficiently inhibited flash-induced cytochrome c oxidation when BChl c was excited...

  5. Photosynthetic CO{sub 2} fixation and energy production - microalgae as a main subject

    Energy Technology Data Exchange (ETDEWEB)

    Asada, Yasuo [National Inst. of Bioscience and Human-Technology, Tsukuba-shi, Ibaraki-ken (Japan)

    1993-12-31

    Research activities for application of microalgal photosynthesis to CO{sub 2} fixation in Japan are overviewed. Presenter`s studies on energy (hydrogen gas) production by cyanobacteria (blue-green algae) and photosynthetic bacteria are also introduced.

  6. Identification and characterization of epoxide hydrolase activity of polycyclic aromatic hydrocarbon-degrading bacteria for biocatalytic resolution of racemic styrene oxide and styrene oxide derivatives.

    Science.gov (United States)

    Woo, Jung-Hee; Kwon, Tae-Hyung; Kim, Jun-Tae; Kim, Choong-Gon; Lee, Eun Yeol

    2013-04-01

    A novel epoxide hydrolase (EHase) from polycyclic aromatic hydrocarbon (PAH)-degrading bacteria was identified and characterized. EHase activity was identified in four strains of PAH-degrading bacteria isolated from commercial gasoline and oil-contaminated sediment based on their growth on styrene oxide and its derivatives, such as 2,3- and 4-chlorostyrene oxides, as a sole carbon source. Gordonia sp. H37 exhibited high enantioselective hydrolysis activity for 4-chlorostyrene oxide with an enantiomeric ratio of 27. Gordonia sp. H37 preferentially hydrolyzed the (R)-enantiomer of styrene oxide derivatives resulting in the preparation of a (S)-enantiomer with enantiomeric excess greater than 99.9 %. The enantioselective EHase activity was identified and characterized in various PAH-degrading bacteria, and whole cell Gordonia sp. H37 was employed as a biocatalyst for preparing enantiopure (S)-styrene oxide derivatives.

  7. Superradiance Transition and Nonphotochemical Quenching in Photosynthetic Complexes

    Energy Technology Data Exchange (ETDEWEB)

    Berman, Gennady Petrovich [Los Alamos National Lab. (LANL), Los Alamos, NM (United States); Nesterov, Alexander [Universidad de Guadalajara, Departamento de Fısica, Jalisco (Mexico); Lopez, Gustavo [Universidad de Guadalajara, Departamento de Fısica, Jalisco (Mexico); Sayre, Richard Thomas [Los Alamos National Lab. (LANL), Los Alamos, NM (United States)

    2015-04-23

    Photosynthetic organisms have evolved protective strategies to allow them to survive in cases of intense sunlight fluctuation with the development of nonphotochemical quenching (NPQ). This process allows light harvesting complexes to transfer the excess sunlight energy to non-damaging quenching channels. This report compares the NPQ process with the superradiance transition (ST). We demonstrated that the maximum of the NPQ efficiency is caused by the ST to the sink associated with the CTS. However, experimental verifications are required in order to determine whether or not the NPQ regime is associated with the ST transition for real photosynthetic complexes. Indeed, it can happen that, in the photosynthetic apparatus, the NPQ regime occurs in the “non-optimal” region of parameters, and it could be independent of the ST.

  8. Transformation of vivianite by anaerobic nitrate-reducing iron-oxidizing bacteria.

    Science.gov (United States)

    Miot, J; Benzerara, K; Morin, G; Bernard, S; Beyssac, O; Larquet, E; Kappler, A; Guyot, F

    2009-06-01

    In phosphate-rich environments, vivianite (Fe(II)(3)(PO(4))(2), 8H(2)O) is an important sink for dissolved Fe(II) and is considered as a very stable mineral due to its low solubility at neutral pH. In the present study, we report the mineralogical transformation of vivianite in cultures of the nitrate-reducing iron-oxidizing bacterial strain BoFeN1 in the presence of dissolved Fe(II). Vivianite was first transformed into a greenish phase consisting mostly of an amorphous mixed valence Fe-phosphate. This precipitate became progressively orange and the final product of iron oxidation consisted of an amorphous Fe(III)-phosphate. The sub-micrometer analysis by scanning transmission X-ray microscopy of the iron redox state in samples collected at different stages of the culture indicated that iron was progressively oxidized at the contact of the bacteria and at a distance from the cells in extracellular minerals. Iron oxidation in the extracellular minerals was delayed by a few days compared with cell-associated Fe-minerals. This led to strong differences of Fe redox in between these two types of minerals and finally to local heterogeneities of redox within the sample. In the absence of dissolved Fe(II), vivianite was not significantly transformed by BoFeN1. Whereas Fe(II) oxidation at the cell contact is most probably directly catalyzed by the bacteria, vivianite transformation at a distance from the cells might result from oxidation by nitrite. In addition, processes leading to the export of Fe(III) from bacterial oxidation sites to extracellular minerals are discussed including some involving colloids observed by cryo-transmission electron microscopy in the culture medium.

  9. Synthesis and shape control of copper tin sulphide nanocrystals and formation of gold-copper tin sulphide hybrid nanostructures

    Energy Technology Data Exchange (ETDEWEB)

    Kruszynska, Marta; Parisi, Juergen; Kolny-Olesiak, Joanna [Oldenburg Univ. (Germany). Inst. of Physics, Energy and Semiconductor Research Lab.

    2014-08-15

    Hexagonal prismatic Cu{sub 3}SnS{sub 4} nanoparticles and nanorods were synthesized by a hot-injection procedure. Changing the reaction conditions leads to the formation of different shapes. When oleylamine is used as a solvent, hexagonal prismatic particles are obtained, while a reaction in octadecene results in the formation of nanorods. The growth process of copper tin sulphide starts with the formation of djurleite copper sulphide seeds. Their reaction with Sn{sup 4+} ions leads to the formation of Cu{sub 3}SnS{sub 4}. These Cu{sub 3}SnS{sub 4} nanocrystals form Au-Cu{sub 3}SnS{sub 4} hybrid nanostructures by reaction with gold seeds.

  10. Iron oxide deposits associated with the ectosymbiotic bacteria in the hydrothermal vent shrimp Rimicaris exoculata

    Directory of Open Access Journals (Sweden)

    P. Compère

    2008-09-01

    Full Text Available The Rimicaris exoculata shrimp is considered as a primary consumer that dominates the fauna of most Mid-Atlantic Ridge (MAR hydrothermal ecosystems. These shrimps harbour in their gill chambers an important ectosymbiotic community of chemoautotrophic bacteria associated with iron oxide deposits. The structure and elemental composition of the mineral concretions associated with these bacteria have been investigated by using LM, ESEM, TEM STEM and EDX microanalyses. The nature of the iron oxides in shrimps obtained from the Rainbow vent field has also been determined by Mössbauer spectroscopy. This multidisciplinary approach has revealed that the three layers of mineral crust in the Rimicaris exoculata shrimps consist of large concretions formed by aggregated nanoparticles of two-line ferrihydrite and include other minor elements as Si, Ca, Mg, S and P, probably present as silicates cations, sulphates or phosphates respectively that may contribute to stabilise the ferrihydrite form of iron oxides. TEM-observations on the bacteria have revealed their close interactions with these minerals. Abiotic and biotic precipitation could occur within the gill chamber of Rimicaris exoculata, suggesting the biologically-mediated formation of the iron oxide deposits. The difference of the bacterial density in the three-mineral crust layers could be correlated to the importance of the iron oxide concretions and suggest that the first mineral particles precipitates on the lower layer which could be considered as the most likely location of iron-oxidizing bacteria.

  11. Phylogenetic diversity of bacteria associated with toxic and non-toxic ...

    African Journals Online (AJOL)

    Phylogenetic diversity of bacteria associated with toxic and non-toxic strains of Alexandrium minutum. L Palacios, B Reguera, J Franco, I Marín. Abstract. Marine planktonic dinoflagellates are usually associated with bacteria, some of which seem to have a symbiotic relation with the dinoflagellate cells. The role of bacteria in ...

  12. Evaluating Acidithiobacillus ferrooxidans bacterial oxidation of sulphur compounds using FTIR and X-ray diffraction assays

    Directory of Open Access Journals (Sweden)

    Alexandra Muñoz

    2003-01-01

    Full Text Available A native bacterial strain capable of oxidising ferrous iron and sulphur compounds was isolated from effluent and material from the La Maruja gold mine in the municipality of Marmato (Caldas; this was biochemically identified as being Acidithiobacillus ferrooxidans. This strain's ability to oxidise metallic sulphide concentrates having two differ-ent pulp proportions and two particle sizes was evaluated. Sulphide bio-oxidation was observed after 15 days showing this strain's catalytic action on the mineral break-down process. Key words: bio-oxidation; bio-leaching; A. ferrooxidans; sulphides

  13. Algal Hydrogen Production -- Stand Alone or Integrated System?

    Energy Technology Data Exchange (ETDEWEB)

    Ghirardi, Maria L.; Maness, Pin Ching; Kosourovo, Sergey

    2016-01-01

    Photosynthetic bacteria and green algae photoproduce H2. but do so utilizing different catalysts and substrates. Green algae use reductant generate mostly by water oxidation to catalyze the reduction of protons to H2 gas, while photosynthetic bacteria catalyze H2 production from organic acids using the nitrogenase enzyme. Moreover, these two organisms utilize different regions of the solar spectrum to perform photosynthesis: green algae's light harvesting antenna is comprised of chlorophyll molecules that absorb mostly blue and red light; photosynthetic bacteria harvest blue and far-red light through their light-harvesting pigments to run its non-oxygenic photosynthetic reactions. There is thus an opportunity to increase the range of solar spectrum used to photoproduce H2 by combining the light-harvesting and catalytic properties of these two organisms in a single process. In the current manuscript, we describe an experimental system that validates this hypothesis and demonstrates quantitatively the advantages of a two organism process for production of higher amounts of H2 and thus achieving solar light conversion efficiencies.

  14. Characterization of sulfur-oxidizing bacteria isolated from acid mine drainage and black shale samples

    International Nuclear Information System (INIS)

    Sajjad, W.; Bhatti, T. M.; Hasan, F.; Khan, S.; Badshah, M.

    2016-01-01

    Acid mine drainage (AMD) and black shale (BS) are the main habitats of sulfur-oxidizing bacteria. The aim of this study was to isolate and characterize sulfur-oxidizing bacteria from extreme acidic habitats (AMD and BS). Concentration of metals in samples from AMD and BS varied significantly from the reference samples and exceeded the acceptable limits set by the Environmental Protection Agency (EPA) and the World Health Organization (WHO). A total of 24 bacteria were isolated from these samples that were characterized both morphologically as well as through biochemical tests. All the bacteria were gram-negative rods that could efficiently oxidize sulfur into sulfate ions (SO/sub 4/-2), resulted into decrease in pH up to 1.0 when grown in thiosulfate medium with initial pH 4.0. Out of 24, only 06 isolates were selected for phylogenetic analysis through 16S rRNA sequencing, on the basis of maximum sulfur-oxidizing efficiency. The isolates were identified as the species from different genera such as Alcaligenes, Pseudomonas, Bordetella, and Stenotrophomonas on the basis of maximum similarity index. The concentration of sulfate ions produced was estimated in the range of 179-272 mg/L. These acidophiles might have various potential applications such as biological leaching of metals from low-grade ores, alkali soil reclamation and to minimize the use of chemical S-fertilizers and minimize environmental pollution. (author)

  15. Communication: Coherences observed in vivo in photosynthetic bacteria using two-dimensional electronic spectroscopy

    International Nuclear Information System (INIS)

    Dahlberg, Peter D.; Norris, Graham J.; Wang, Cheng; Viswanathan, Subha; Singh, Ved P.; Engel, Gregory S.

    2015-01-01

    Energy transfer through large disordered antenna networks in photosynthetic organisms can occur with a quantum efficiency of nearly 100%. This energy transfer is facilitated by the electronic structure of the photosynthetic antennae as well as interactions between electronic states and the surrounding environment. Coherences in time-domain spectroscopy provide a fine probe of how a system interacts with its surroundings. In two-dimensional electronic spectroscopy, coherences can appear on both the ground and excited state surfaces revealing detailed information regarding electronic structure, system-bath coupling, energy transfer, and energetic coupling in complex chemical systems. Numerous studies have revealed coherences in isolated photosynthetic pigment-protein complexes, but these coherences have not been observed in vivo due to the small amplitude of these signals and the intense scatter from whole cells. Here, we present data acquired using ultrafast video-acquisition gradient-assisted photon echo spectroscopy to observe quantum beating signals from coherences in vivo. Experiments were conducted on isolated light harvesting complex II (LH2) from Rhodobacter sphaeroides, whole cells of R. sphaeroides, and whole cells of R. sphaeroides grown in 30% deuterated media. A vibronic coherence was observed following laser excitation at ambient temperature between the B850 and the B850 ∗ states of LH2 in each of the 3 samples with a lifetime of ∼40-60 fs

  16. Communication: Coherences observed in vivo in photosynthetic bacteria using two-dimensional electronic spectroscopy

    Energy Technology Data Exchange (ETDEWEB)

    Dahlberg, Peter D. [Graduate Program in the Biophysical Sciences, Institute for Biophysical Dynamics, and The James Franck Institute, The University of Chicago, Chicago, Illinois 60637 (United States); Norris, Graham J.; Wang, Cheng; Viswanathan, Subha; Singh, Ved P.; Engel, Gregory S., E-mail: gsengel@uchicago.edu [Department of Chemistry, Institute for Biophysical Dynamics, and The James Franck Institute, The University of Chicago, Chicago, Illinois 60637 (United States)

    2015-09-14

    Energy transfer through large disordered antenna networks in photosynthetic organisms can occur with a quantum efficiency of nearly 100%. This energy transfer is facilitated by the electronic structure of the photosynthetic antennae as well as interactions between electronic states and the surrounding environment. Coherences in time-domain spectroscopy provide a fine probe of how a system interacts with its surroundings. In two-dimensional electronic spectroscopy, coherences can appear on both the ground and excited state surfaces revealing detailed information regarding electronic structure, system-bath coupling, energy transfer, and energetic coupling in complex chemical systems. Numerous studies have revealed coherences in isolated photosynthetic pigment-protein complexes, but these coherences have not been observed in vivo due to the small amplitude of these signals and the intense scatter from whole cells. Here, we present data acquired using ultrafast video-acquisition gradient-assisted photon echo spectroscopy to observe quantum beating signals from coherences in vivo. Experiments were conducted on isolated light harvesting complex II (LH2) from Rhodobacter sphaeroides, whole cells of R. sphaeroides, and whole cells of R. sphaeroides grown in 30% deuterated media. A vibronic coherence was observed following laser excitation at ambient temperature between the B850 and the B850{sup ∗} states of LH2 in each of the 3 samples with a lifetime of ∼40-60 fs.

  17. High rates of anaerobic oxidation of methane, ethane and propane coupled to thiosulphate reduction.

    Science.gov (United States)

    Suarez-Zuluaga, Diego A; Weijma, Jan; Timmers, Peer H A; Buisman, Cees J N

    2015-03-01

    Anaerobic methane oxidation coupled to sulphate reduction and the use of ethane and propane as electron donors by sulphate-reducing bacteria represent new opportunities for the treatment of streams contaminated with sulphur oxyanions. However, growth of microbial sulphate-reducing populations with methane, propane or butane is extremely slow, which hampers research and development of bioprocesses based on these conversions. Thermodynamic calculations indicate that the growth rate with possible alternative terminal electron acceptors such as thiosulphate and elemental sulphur may be higher, which would facilitate future research. Here, we investigate the use of these electron acceptors for oxidation of methane, ethane and propane, with marine sediment as inoculum. Mixed marine sediments originating from Aarhus Bay (Denmark) and Eckernförde Bay (Germany) were cultivated anaerobically at a pH between 7.2 and 7.8 and a temperature of 15 °C in the presence of methane, ethane and propane and various sulphur electron acceptors. The sulphide production rates in the conditions with methane, ethane and propane with sulphate were respectively 2.3, 2.2 and 1.8 μmol S L(-1) day(-1). For sulphur, no reduction was demonstrated. For thiosulphate, the sulphide production rates were up to 50 times higher compared to those of sulphate, with 86.2, 90.7 and 108.1 μmol S L(-1) day(-1) for methane, ethane and propane respectively. This sulphide production was partly due to disproportionation, 50 % for ethane but only 7 and 14 % for methane and propane respectively. The oxidation of the alkanes in the presence of thiosulphate was confirmed by carbon dioxide production. This is, to our knowledge, the first report of thiosulphate use as electron acceptor with ethane and propane as electron donors. Additionally, these results indicate that thiosulphate is a promising electron acceptor to increase start-up rates for sulphate-reducing bioprocesses coupled to short-chain alkane oxidation.

  18. Photosynthetic and nitrogen fixation capability in several soybean mutant lines

    International Nuclear Information System (INIS)

    Gandanegara, S.; Hendratno, K.

    1987-01-01

    Photosynthetic and nitrogen fixation capability in several soybean mutant lines. A greenhouse experiment has been carried out to study photosynthetic and nitrogen fixation capability of five mutant lines and two soybean varieties. An amount of 330 uCi of 14 CO 2 was fed to the plants including of the non-fixing reference crop (Chippewa non-nodulating isoline). Nitrogen fixation measurements was carried out using 15 N isotope dilution technique according to A-value concept. Results showed that beside variety/mutant lines, plant growth also has important role in photosynthetic and N fixing capability. Better growth and a higher photosynthetic capability in Orba, mutant lines nos. 63 and 65 resulted in a greater amount of N 2 fixed (mg N/plant) than other mutant lines. (author). 12 refs.; 5 figs

  19. Flotation of sulphide minerals 1990

    Energy Technology Data Exchange (ETDEWEB)

    Forssberg, K S.E. [ed.; Luleaa University of Technology, Luleaa (Sweden). Division of Mineral Processing

    1991-01-01

    A total of 27 papers presented at the workshop on flotation of sulphide minerals, reprinted from the International Journal of Mineral Processing, vol. 33, nos. 1-4, are included in this book. They cover various aspects of flotation of such minerals as chalcopyrite, pyrrhotite, galena, malachite and pyrite.

  20. Impact of chemical oxidation on indigenous bacteria and mobilization of nutrients and subsequent bioremediation of crude oil-contaminated soil.

    Science.gov (United States)

    Xu, Jinlan; Deng, Xin; Cui, Yiwei; Kong, Fanxing

    2016-12-15

    Fenton pre-oxidation provides nutrients to promote bioremediation. However, the effects of the indigenous bacteria that remain following Fenton oxidation on nutrient mobilization and subsequent bioremediation remain unclear. Experiments were performed with inoculation with native bacteria and foreign bacteria or without inoculation after four regimens of stepwise pre-oxidations. The effects of the indigenous bacteria remaining after stepwise oxidation on nutrient mobilization and subsequent bioremediation over 80 days were investigated. After stepwise Fenton pre-oxidation at a low H 2 O 2 concentration (225×4), the remaining indigenous bacterial populations reached their peak (4.8±0.17×10 6 CFU/g), the nutrients were mobilized rapidly, and the subsequent bioremediation of crude oil was improved (biodegradation efficiency of 35%). However, after stepwise Fenton pre-oxidation at a high H 2 O 2 concentration (450×4), only 3.6±0.16×10 3 CFU/g of indigenous bacteria remained, and the indigenous bacteria that degrade C 15 -C 30 alkanes were inhibited. The nutrient mobilization was then highly limited, and only 19% of total petroleum hydrocarbon was degraded. Furthermore, the recovery period after the low H 2 O 2 concentration stepwise Fenton pre-oxidation (225×4) was less than 20 days, which was 20-30 days shorter than with the other pre-oxidation treatments. Therefore, stepwise Fenton pre-oxidation at a low H 2 O 2 concentration protects indigenous bacterial populations and improves the nutrient mobilization and subsequent bioremediation. Copyright © 2016 Elsevier B.V. All rights reserved.

  1. Removal of mercury (II), elemental mercury and arsenic from simulated flue gas by ammonium sulphide.

    Science.gov (United States)

    Ning, Ping; Guo, Xiaolong; Wang, Xueqian; Wang, Ping; Ma, Yixing; Lan, Yi

    2015-01-01

    A tubular resistance furnace was used as a reactor to simulate mercury and arsenic in smelter flue gases by heating mercury and arsenic compounds. The flue gas containing Hg(2+), Hg(0) and As was treated with ammonium sulphide. The experiment was conducted to investigate the effects of varying the concentration of ammonium sulphide, the pH value of ammonium sulphide, the temperature of ammonium sulphide, the presence of SO2 and the presence of sulphite ion on removal efficiency. The prepared adsorption products were characterized by Fourier transform infrared spectroscopy, X-ray diffraction, X-ray photoelectron spectroscopy and scanning electron microscopy. The results showed that the optimal concentration of ammonium sulphide was 0.8 mol/L. The optimal pH value of ammonium sulphide was 10, and the optimal temperature of ammonium sulphide was 20°C.Under the optimum conditions, the removal efficiency of Hg(2+), Hg(0) and As could reach 99%, 88.8%, 98%, respectively. In addition, SO2 and sulphite ion could reduce the removal efficiency of mercury and arsenic from simulated flue gas.

  2. Synthesis of bacteria promoted reduced graphene oxide-nickel sulfide networks for advanced supercapacitors.

    Science.gov (United States)

    Zhang, Haiming; Yu, Xinzhi; Guo, Di; Qu, Baihua; Zhang, Ming; Li, Qiuhong; Wang, Taihong

    2013-08-14

    Supercapacitors with potential high power are useful and have attracted much attention recently. Graphene-based composites have been demonstrated to be promising electrode materials for supercapacitors with enhanced properties. To improve the performance of graphene-based composites further and realize their synthesis with large scale, we report a green approach to synthesize bacteria-reduced graphene oxide-nickel sulfide (BGNS) networks. By using Bacillus subtilis as spacers, we deposited reduced graphene oxide/Ni3S2 nanoparticle composites with submillimeter pores directly onto substrate by a binder-free electrostatic spray approach to form BGNS networks. Their electrochemical capacitor performance was evaluated. Compared with stacked reduced graphene oxide-nickel sulfide (GNS) prepared without the aid of bacteria, BGNS with unique nm-μm structure exhibited a higher specific capacitance of about 1424 F g(-1) at a current density of 0.75 A g(-1). About 67.5% of the capacitance was retained as the current density increased from 0.75 to 15 A g(-1). At a current density of 75 A g(-1), a specific capacitance of 406 F g(-1) could still remain. The results indicate that the reduced graphene oxide-nickel sulfide network promoted by bacteria is a promising electrode material for supercapacitors.

  3. Properties of gallium lanthanum sulphide glass

    OpenAIRE

    Bastock, P.; Craig, C.; Khan, K.; Weatherby, E.; Yao, J.; Hewak, D.W.

    2015-01-01

    A series of gallium lanthanum sulphide (GLS) glasses has been studied in order to ascertain properties across the entire glass forming region. This is the first comprehensive study of GLS glass over a wide compositional range.

  4. Magnetic irone oxide nanoparticles in photosynthetic systems

    International Nuclear Information System (INIS)

    Khalilov, R.I.; Nasibova, A.N.; Khomutov, G.B.

    2014-01-01

    Full text : It was found and studied the effect of biogenic formation of magnetic inclusions in photosynthetic systems - in various higher plants under the influence of some external stress factors (radiation impact, moisture deficit) and in a model system - a suspension of chloroplasts. For registration and characterization of magnetic nanoparticles in the samples used EPR spectrometer because superparamagnetic and ferromagnetic nanoparticles have a chcracteristic signals of electron magnetic resonance. For direct visualization of magnetic nanoparticles it was used the method of transmission electron microscopy

  5. Anaerobic Ammonium-Oxidizing Bacteria: Unique Microorganisms with Exceptional Properties

    Science.gov (United States)

    Jetten, Mike S. M.

    2012-01-01

    Summary: Anaerobic ammonium-oxidizing (anammox) bacteria defy many microbiological concepts and share numerous properties with both eukaryotes and archaea. Among their most intriguing characteristics are their compartmentalized cell plan and archaeon-like cell wall. Here we review our current knowledge about anammox cell biology. The anammox cell is divided into three separate compartments by bilayer membranes. The anammox cell consists of (from outside to inside) the cell wall, paryphoplasm, riboplasm, and anammoxosome. Not much is known about the composition or function of both the anammox cell wall and the paryphoplasm compartment. The cell wall is proposed to be proteinaceous and to lack both peptidoglycan and an outer membrane typical of Gram-negative bacteria. The function of the paryphoplasm is unknown, but it contains the cell division ring. The riboplasm resembles the standard cytoplasmic compartment of other bacteria; it contains ribosomes and the nucleoid. The anammoxosome occupies most of the cell volume and is a so-called “prokaryotic organelle” analogous to the eukaryotic mitochondrion. This is the site where the anammox reaction takes place, coupled over the curved anammoxosome membrane, possibly giving rise to a proton motive force and subsequent ATP synthesis. With these unique properties, anammox bacteria are food for thought concerning the early evolution of the domains Bacteria, Archaea, and Eukarya. PMID:22933561

  6. Development of hydrogen oxidizing bacteria using hydrogen from radiolysis or metal corrosion

    International Nuclear Information System (INIS)

    Libert, M.F.; Sellier, R.; Marty, V.; Camaro, S.

    2000-01-01

    The effect of many parameters need to be studied to characterize the long term behavior of nuclear waste in a deep repository. These parameters concern the chemical effects, radiolytic effects, mechanical properties, water composition, and microbiological activity. To evaluate microbial activity in such an environment, work was focused on an inventory of key nutrients (C, H, 0, N, P, S) and energy sources required for bacterial growth. The production of hydrogen in the nuclear waste environment leads to the growth of hydrogen oxidizing bacteria, which modify the gas production balance. A deep repository containing bituminized waste drums implies several sources of hydrogen: - water radiolysis; -corrosion of metal containers; - radiolysis of the embedding matrix (bitumen). Two deep geological disposal conditions leading to H 2 production in a bituminized nuclear waste environment were simulated in the present study: - H 2 production by iron corrosion under anaerobic conditions was simulated by adding 10% of H 2 in the atmosphere; - H 2 production by radiolysis of bitumen matrix was approached by subjecting this material to external gamma irradiation with a dose rate near real conditions (6 Gy/h). The presence of dissolved H 2 in water allows the growth of hydrogen oxidizing bacteria leading to: - CO 2 and N 2 production; - H 2 consumption; - lower NO 3 - concentration caused by reduction to nitrogen. In the first case, hydrogen consumption is limited by the NO 3 - release rate from the bitumen matrix. In the second case, however, under gamma radiation at a low dose rate, hydrogen production is weak, and the hydrogen is completely consumed by microorganisms. Knowledge about these hydrogen oxidizing bacteria is just beginning to emerge. Heterotrophic denitrifying bacteria adapt well to hydrogen metabolism (autotrophic metabolism) by oxidizing H 2 instead of hydrocarbons. (authors)

  7. In vitro antibacterial activity of oxide and non-oxide bioceramics for arthroplastic devices: II. Fourier transform infrared spectroscopy.

    Science.gov (United States)

    Boschetto, Francesco; Toyama, Nami; Horiguchi, Satoshi; Bock, Ryan M; McEntire, Bryan J; Adachi, Tetsuya; Marin, Elia; Zhu, Wenliang; Mazda, Osam; Bal, B Sonny; Pezzotti, Giuseppe

    2018-04-30

    The metabolic response of Gram-positive Staphylococcus epidermidis (S. epidermidis) bacteria to bioceramic substrates was probed by means of Fourier transform infrared spectroscopy (FTIR). Oxide zirconia-toughened alumina (ZTA) and non-oxide silicon nitride (Si3N4) substrates were tested. Bacteria exposed to silica glass substrates were used as a control. S. epidermidis, a major cause of periprosthetic infections, was screened to obtain a precise time-lapse knowledge of its molecular composition and to mechanistically understand its interaction with different substrates. At the molecular level, the structure of proteins, lipids, nucleic acid, and aromatic amino acids evolved with time in response to different substrates. In combination with statistical validation and local pH measurements, a chemical lysis mechanism was spectroscopically observed in situ on the Si3N4 substrates. Utilization of FTIR in this study avoided fluorescence noise which occurred while probing the ZTA samples with Raman spectroscopy in a companion paper. The substrate-driven dynamics of polysaccharide and peptide variations in the bacterial cell wall, peculiar to Si3N4 bioceramics, are elucidated.

  8. Changes in photosynthetic performance and antioxidative strategies during maturation of Norway maple (Acer platanoides L.) leaves.

    Science.gov (United States)

    Lepeduš, Hrvoje; Gaća, Vlatka; Viljevac, Marija; Kovač, Spomenka; Fulgosi, Hrvoje; Simić, Domagoj; Jurković, Vlatka; Cesar, Vera

    2011-04-01

    Different structural and functional changes take place during leaf development. Since some of them are highly connected to oxidative metabolism, regulation of reactive oxygen species (ROS) abundance is required. Most of the reactive oxygen species ROS in plant cells are produced in chloroplasts as a result of highly energetic reactions of photosynthesis. The aim of our study was to examine the changes in concentration of oxidative stress parameters (TBARS - thiobarbituric acid-reacting substances and protein carbonyls) as well as antioxidative strategies during development of maple (Acer platanoides L.) leaves in the light of their enhanced photosynthetic performance. We reveal that biogenesis of the photosynthetic apparatus during maple leaf maturation corresponded with oxidative damage of lipids, but not proteins. In addition, antioxidative responses in young leaves differed from that in older leaves. Young leaves had high values of non-photochemical quenching (NPQ) and catalase (CAT, EC 1.11.1.6) activity which declined during the maturation process. Developing leaves were characterized by an increase in TBARS level, the content of non-enzymatic antioxidants as well as ascorbate peroxidase activity (APX, EC 1.11.1.11), while the content of protein carbonyls decreased with leaf maturation. Fully developed leaves had the highest lipid peroxidation level accompanied by a maximum in ascorbic acid content and superoxide dismutase activity (SOD, EC1.15.1.1). These observations imply completely different antioxidative strategies during leaf maturation enabling them to perform their basic function. Copyright © 2011 Elsevier Masson SAS. All rights reserved.

  9. Bio-assisted synthesis and characterization of nanostructured bismuth (III) sulphide using Clostridium acetobutylicum

    International Nuclear Information System (INIS)

    Kamaraj, Sathish Kumar; Venkatachalam, Ganesh; Arumugam, Palaniappan; Berchmans, Sheela

    2014-01-01

    Nanostructured bismuth (III) sulphide is synthesized at room temperature using a hydrogen sulphide producing microorganism namely Clostridium acetobutylicum. On contrary to chemical routes involving both the high and room temperature methods, the present experimental procedure involves a bio-assisted approach. This method is free from the usage of toxic and hazardous chemicals making it an environment friendly route. The synthesized bismuth sulphide is characterized using transmission electron microscope (TEM), powder X-ray diffraction (XRD), X-ray photoelectron spectroscopy (XPS) and cyclic voltammetry (CV). From our experiments we find that bismuth sulphide produced using this bio-assisted approach exhibits a hexagonal shaped plate-like structures and is stabilized by the extracellular proteins present in the culture medium. - Graphical abstract: A green chemistry approach towards the synthesis of bismuth (III) sulphide nanostructures at room temperature using a hydrogen sulphide producing microorganism namely, Clostridium acetobutylicum is demonstrated. - Highlights: • Environmentally benign (greener) route towards synthesis of Bi 2 S 3 nanostructures. • Bio-assisted synthesis of Bi 2 S 3 at room temperature using Clostridium acetobutylicum. • Extracellular proteins in H 2 S producing microorganism as stabilizer for Bi 2 S 3 NPs. • Hexagonal platelets of Bi 2 S 3 possessing an orthorhombic crystalline structure

  10. Quantification of syntrophic fatty acid-beta-oxidizing bacteria in a mesophilic biogas reactor by oligonucleotide probe hybridization

    DEFF Research Database (Denmark)

    Hansen, K.W.; Ahring, Birgitte Kiær; Raskin, L.

    1999-01-01

    Small-subunit rRNA sequences were obtained for two saturated fatty acid-beta-oxidizing syntrophic bacteria, Syntrophomonas sapovorans and Syntrophomonas wolfei LYE, and sequence analysis confirmed their classification as members of the family Syntrophomonadaceae. S, wolfei LYE was closely related...... fatty acid-beta-oxidizing syntrophic bacteria in methanogenic environments, the microbial community structure of a sample from a full-scale biogas plant was determined. Hybridization results with probes for syntrophic bacteria-and methanogens were compared to specific methanogenic activities...

  11. Improving Delivery of Photosynthetic Reducing Power to Cytochrome P450s

    DEFF Research Database (Denmark)

    Mellor, Silas Busck

    at sustainable production of high-value and commodity products. Cytochrome P450 enzymes play key roles in the biosynthesis of important natural products. The electron carrier ferredoxin can couple P450s non-natively to photosynthetic electron supply, providing ample reducing power for catalysis. However......, photosynthetic reducing power feeds into both central and specialized metabolism, which leads to a fiercely competitive system from which to siphon reductant. This thesis explores the optimization of light-driven P450 activity, and proposes strategies to overcome the limitations imposed by competition...... for photosynthetic reducing power. Photosynthetic electron carrier proteins interact with widely different partners because they use relatively non-specific interactions. The mechanistic basis of these interactions and its impact on natural electron transfer complexes is discussed. This particular type...

  12. Mn K-edge XANES spectroscopy of photosynthetic water oxidation enzyme in the S0-, S1-, S2- and S3-states induced by flash excitation

    International Nuclear Information System (INIS)

    Ono, Taka-aki; Noguchi, Takumi; Inoue, Yorinao; Kusunoki, Masami; Matsushita, Tadashi; Oyanagi, Hiroyuki.

    1993-01-01

    Electronic and structural rearrangement of the Mn-cluster during the four step oxidation of water in photosynthetic oxygen evolution was studied by XANES spectroscopy. The Mn K-edge energy of the spectrum was changed with flash number to show a clear quadruple oscillation, indicating a periodic change in oxidation and electronic state of the Mn-cluster depending on Joliot and Kok's oxygen clock. (author)

  13. Roseobacter-Like Bacteria in Red and Mediterranean Sea Aerobic Anoxygenic Photosynthetic Populations

    Czech Academy of Sciences Publication Activity Database

    Oz, A.; Sabehi, G.; Koblížek, Michal; Massana, R.; Béja, O.

    2005-01-01

    Roč. 71, č. 1 (2005), s. 344-353 ISSN 0099-2240 R&D Projects: GA ČR GP206/03/P079; GA MŠk LN00A141 Institutional research plan: CEZ:AV0Z5020903 Keywords : Roseobacter * photosynthetic population Subject RIV: EE - Microbiology, Virology Impact factor: 3.818, year: 2005

  14. Nutrient scavenging activity and antagonistic factors of non-photobiont lichen-associated bacteria: a review.

    Science.gov (United States)

    Sigurbjörnsdóttir, M Auður; Andrésson, Ólafur S; Vilhelmsson, Oddur

    2016-04-01

    Lichens are defined as the specific symbiotic structure comprising a fungus and a green alga and/or cyanobacterium. Up until recently, non-photobiont endothallic bacteria, while known to be present in large numbers, have generally been dismissed as functionally irrelevant cohabitants of the lichen thallus, or even environmental contaminants. Recent analyses of lichen metagenomes and innovative co-culture experiments have uncovered a functionally complex community that appears to contribute to a healthy lichen thallus in several ways. Lichen-associated bacteriomes are typically dominated by several lineages of Proteobacteria, some of which may be specific for lichen species. Recent work has implicated members of these lineages in several important ecophysiological roles. These include nutrient scavenging, including mobilization of iron and phosphate, nitrogen fixation, cellulase, xylanase and amylase activities, and oxidation of recalcitrant compounds, e.g. aromatics and aliphatics. Production of volatile organic compounds, conferring antibacterial and antifungal activity, has also been demonstrated for several lichen-associated isolates. In the present paper we review the nature of non-phototrophic endolichenic bacteria associated with lichens, and give insight into the current state of knowledge on their importance the lichen symbiotic association.

  15. Flotation of zinc and lead oxide minerals from Olkusz region calamine ores

    Directory of Open Access Journals (Sweden)

    Cichy Krystian

    2016-01-01

    Full Text Available The paper presents chemical and mineralogical characteristics of calamine ore from the Pomorzany mine. A flowsheet for recovery of sulphide minerals of zinc and lead in the form of the Zn-Pb bulk concentrate was presented. In the following part, preparation of the feed for flotation of Zn-Pb oxide minerals and optimal conditions for separation from it iron sulphide minerals, represented by marcasite, were determined. In the final section the results of flotation of Zn-Pb oxide minerals with anionic collector AM2 belonging to the hydroxyamide group of collectors and a cationic collector in the form of a coconut amine, being a mixture of primary aliphatic amines, were presented. Basing on the obtained results, a technological flowsheet for the recovery of Zn-Pb sulphide and oxide minerals from the calamine ore of the Pomorzany mine was presented.

  16. Determination of iron sulphides in roofing slates from the north west of Spain

    Directory of Open Access Journals (Sweden)

    García-Guinea, J.

    2002-06-01

    Full Text Available The most important production of roofing slates in the world is quarried from the Ordovician formations of the Truchas Syncline, which have the largest amount of working quarries. Roofing slates, sometimes, have crystallized iron sulphides such as pyrite, pyrrhotite and other minerals. These iron sulphides oxidise and stain the tiles when are exposed to atmospheric conditions, so much oxidized how much more inclined is the roof. Galician quarrymen distinguish between harmless pyrite (i.e., resistant cubes of pyrite and damaging pyrite (i.e., other alterable metallic minerals such as pyrrhotite, chalcopyrite, marcasite and arsenopyirite. An improved identification method is proposed using both methods (a chemical element ratios of samples under electron microprobes and (b quantitative determination of the iron sulphides in the slate measuring the oxidized areas by digital camera. The analysed Fe/S ratios, in an XY plot, of seventy metallic samples, define three separated zones: pyrite, pyrrhotite and iron oxi-hydroxides. Quantitative determination of iron sulphides in the slate tile were performed by sinking the tile horizontally for six hours in oxygen peroxide (3% diluted and capturing the oxidation areas with a magnetic camera and analysing the bitmap images with Sigma-Scan 5 software. The proposed method is faster than the Spanish UNE norm (UNE-EN- 12326-2 Sept.2000, which requires thermal strike cycles for a month. The necessary use of heavy analytical equipment such as electron microprobes can be facilitated by installing it in the Slate Technological Centre of Sobradelo de Valdeorras (Orense or by using a simple optical stereoscopic zoom microscope to classify the iron minerals.

    Las formaciones ordovícicas del Sinclinal de Duchas concentran la mayor producción mundial de pizarra para cubiertas y el mayor número de canteras en producción. Las pizarras para cubiertas muchas veces contienen sulfuros de hierro cristalizados en forma

  17. Reactive Oxygen Species on the Early Earth and Survival of Bacteria

    Science.gov (United States)

    Balk, Melikea; Mason, Paul; Stams, Alfons J. M.; Smidt, Hauke; Freund, Friedemann; Rothschild, Lynn

    2011-01-01

    An oxygen-rich atmosphere appears to have been a prerequisite for complex, multicellular life to evolve on Earth and possibly elsewhere in the Universe. However it remains unclear how free oxygen first became available on the early Earth. A potentially important, and as yet poorly constrained pathway, is the production of oxygen through the weathering of rocks and release into the near-surface environment. Reactive Oxygen Species (ROS), as precursors to molecular oxygen, are a key step in this process, and may have had a decisive impact on the evolution of life, present and past. ROS are generated from minerals in igneous rocks during hydrolysis of peroxy defects, which consist of pairs of oxygen anions oxidized to the valence state -1 and during (bio) transformations of iron sulphide minerals. ROS are produced and consumed by intracellular and extracellular reactions of Fe, Mn, C, N, and S species. We propose that, despite an overall reducing or neutral oxidation state of the macroenvironment and the absence of free O2 in the atmosphere, organisms on the early Earth had to cope with ROS in their microenvironments. They were thus under evolutionary pressure to develop enzymatic and other defences against the potentially dangerous, even lethal effects of oxygen and its derived ROS. Conversely it appears that microorganisms learned to take advantage of the enormous reactive potential and energy gain provided by nascent oxygen. We investigate how oxygen might be released through weathering. We test microorganisms in contact with rock surfaces and iron sulphides. We model bacteria such as Deionococcus radiodurans and Desulfotomaculum, Moorella and Bacillus species for their ability to grow or survive in the presence of ROS. We examine how early Life might have adapted to oxygen.

  18. Biogenic Properties of Deep Waters from the Black Sea Reduction (Hydrogen Sulphide) Zone for Marine Algae

    OpenAIRE

    Polikarpov, Gennady G.; Lazorenko, Galina Е.; Тereschenko, Natalya N.

    2015-01-01

    Abstract Generalized data of biogenic properties investigations of the Black Sea deep waters from its reduction zone for marine algae are presented. It is shown on board and in laboratory that after pre-oxidation of hydrogen sulphide by intensive aeration of the deep waters lifted to the surface of the sea, they are ready to be used for cultivation of the Black Sea unicellular, planktonic, and multicellular, benthic, algae instead of artificial medium. Naturally balanced micro- and macroeleme...

  19. Comparison of Six DNA Extraction Procedures and the Application of Plastid DNA Enrichment Methods in Selected Non-photosynthetic Plants

    Directory of Open Access Journals (Sweden)

    Shin-Yi Shyu

    2013-12-01

    Full Text Available Genomic DNA was isolated using three DNA extraction commercial kits and three CTAB-based methods for two non-photosynthetic plants, Balanophora japonica and Mitrastemon kanehirai. The quality of the isolated DNA was evaluated and subjected to following restriction enzyme digestions. All six procedures yielded DNA of sufficient quality for PCR, and the method described by Barnwell et al. (1998 performed well in isolating DNA from both species for restriction enzyme digestion. In addition, we succeeded to enrich plastid DNA content by using the methods depending on a high salt buffer to deplete nuclear material. The ‘high salt’ methods based on protocol presented by Milligan (1989 were able to increase plastid DNA effectively and significantly reduce nuclear DNA from M. kanehirai. The plastid DNA enrichment protocols are inexpensive and not time-consuming, and may be applicable to other non-photosynthetic plants.

  20. The study of metal sulphide nanomaterials obtained by chemical bath deposition and hot-injection technique

    Science.gov (United States)

    Maraeva, E. V.; Alexandrova, O. A.; Forostyanaya, N. A.; Levitskiy, V. S.; Mazing, D. S.; Maskaeva, L. N.; Markov, V. Ph; Moshnikov, V. A.; Shupta, A. A.; Spivak, Yu M.; Tulenin, S. S.

    2015-11-01

    In this study lead sulphide - cadmium sulphide based layers were obtained through chemical deposition of water solutions and cadmium sulphide quantum dots were formed through hot-injection technique. The article discusses the results of surface investigations with the use of atomic force microscopy, Raman spectroscopy and photoluminescence measurements.

  1. Advances in methods for detection of anaerobic ammonium oxidizing (anammox) bacteria.

    Science.gov (United States)

    Li, Meng; Gu, Ji-Dong

    2011-05-01

    Anaerobic ammonium oxidation (anammox), the biochemical process oxidizing ammonium into dinitrogen gas using nitrite as an electron acceptor, has only been recognized for its significant role in the global nitrogen cycle not long ago, and its ubiquitous distribution in a wide range of environments has changed our knowledge about the contributors to the global nitrogen cycle. Currently, several groups of methods are used in detection of anammox bacteria based on their physiological and biochemical characteristics, cellular chemical composition, and both 16S rRNA gene and selective functional genes as biomarkers, including hydrazine oxidoreductase and nitrite reductase encoding genes hzo and nirS, respectively. Results from these methods coupling with advances in quantitative PCR, reverse transcription of mRNA genes and stable isotope labeling have improved our understanding on the distribution, diversity, and activity of anammox bacteria in different environments both natural and engineered ones. In this review, we summarize these methods used in detection of anammox bacteria from various environments, highlight the strengths and weakness of these methods, and also discuss the new development potentials on the existing and new techniques in the future.

  2. Knowledge on possibilities of applying mineral biotechnology to treatment of Slovak sulphide ores

    Directory of Open Access Journals (Sweden)

    Štyriaková Iveta

    1997-09-01

    Full Text Available The summary of results from research aimed at possibilities to use biotechnological procedures for treatment of Slovak sulphide ores is presented in this study. The object of the research is an extraction of valuable metals, undesirable admixtures and degradation of crystallic lattice of sulphides for subsequent chemical leaching processing of precious metals. Further, the results of experiments on existence of biogenic processes in situ on waste dumps from exploitation containing residual sulphides are presented.

  3. Biological diversity of photosynthetic reaction centers and the solid-state photo-CIDNP effect

    NARCIS (Netherlands)

    Roy, Esha

    2007-01-01

    Photosynthetic reaction centers (RCs) from plants, heliobacteria and green sulphur bacteria has been investigated with photochemically induced dynamic nuclear polarization (photo-CIDNP) MAS NMR. In photosystem (PS) I of spinach, all signals appear negative which is proposed by a predominance of the

  4. Whole-Genome Sequence of the Purple Photosynthetic Bacterium Rhodovulum sulfidophilum Strain W4

    OpenAIRE

    Masuda, Shinji; Hori, Koichi; Maruyama, Fumito; Ren, Shukun; Sugimoto, Saori; Yamamoto, Nozomi; Mori, Hiroshi; Yamada, Takuji; Sato, Shusei; Tabata, Satoshi; Ohta, Hiroyuki; Kurokawa, Ken

    2013-01-01

    We report the draft genome sequence of the purple photosynthetic bacterium Rhodovulum sulfidophilum. The photosynthesis gene cluster comprises two segments?a unique feature among photosynthesis gene clusters of purple bacteria. The genome information will be useful for further analysis of bacterial photosynthesis.

  5. Nitrate Reduction to Nitrite, Nitric Oxide and Ammonia by Gut Bacteria under Physiological Conditions

    Science.gov (United States)

    Tiso, Mauro; Schechter, Alan N.

    2015-01-01

    The biological nitrogen cycle involves step-wise reduction of nitrogen oxides to ammonium salts and oxidation of ammonia back to nitrites and nitrates by plants and bacteria. Neither process has been thought to have relevance to mammalian physiology; however in recent years the salivary bacterial reduction of nitrate to nitrite has been recognized as an important metabolic conversion in humans. Several enteric bacteria have also shown the ability of catalytic reduction of nitrate to ammonia via nitrite during dissimilatory respiration; however, the importance of this pathway in bacterial species colonizing the human intestine has been little studied. We measured nitrite, nitric oxide (NO) and ammonia formation in cultures of Escherichia coli, Lactobacillus and Bifidobacterium species grown at different sodium nitrate concentrations and oxygen levels. We found that the presence of 5 mM nitrate provided a growth benefit and induced both nitrite and ammonia generation in E.coli and L.plantarum bacteria grown at oxygen concentrations compatible with the content in the gastrointestinal tract. Nitrite and ammonia accumulated in the growth medium when at least 2.5 mM nitrate was present. Time-course curves suggest that nitrate is first converted to nitrite and subsequently to ammonia. Strains of L.rhamnosus, L.acidophilus and B.longum infantis grown with nitrate produced minor changes in nitrite or ammonia levels in the cultures. However, when supplied with exogenous nitrite, NO gas was readily produced independently of added nitrate. Bacterial production of lactic acid causes medium acidification that in turn generates NO by non-enzymatic nitrite reduction. In contrast, nitrite was converted to NO by E.coli cultures even at neutral pH. We suggest that the bacterial nitrate reduction to ammonia, as well as the related NO formation in the gut, could be an important aspect of the overall mammalian nitrate/nitrite/NO metabolism and is yet another way in which the microbiome

  6. Nitrate reduction to nitrite, nitric oxide and ammonia by gut bacteria under physiological conditions.

    Directory of Open Access Journals (Sweden)

    Mauro Tiso

    Full Text Available The biological nitrogen cycle involves step-wise reduction of nitrogen oxides to ammonium salts and oxidation of ammonia back to nitrites and nitrates by plants and bacteria. Neither process has been thought to have relevance to mammalian physiology; however in recent years the salivary bacterial reduction of nitrate to nitrite has been recognized as an important metabolic conversion in humans. Several enteric bacteria have also shown the ability of catalytic reduction of nitrate to ammonia via nitrite during dissimilatory respiration; however, the importance of this pathway in bacterial species colonizing the human intestine has been little studied. We measured nitrite, nitric oxide (NO and ammonia formation in cultures of Escherichia coli, Lactobacillus and Bifidobacterium species grown at different sodium nitrate concentrations and oxygen levels. We found that the presence of 5 mM nitrate provided a growth benefit and induced both nitrite and ammonia generation in E.coli and L.plantarum bacteria grown at oxygen concentrations compatible with the content in the gastrointestinal tract. Nitrite and ammonia accumulated in the growth medium when at least 2.5 mM nitrate was present. Time-course curves suggest that nitrate is first converted to nitrite and subsequently to ammonia. Strains of L.rhamnosus, L.acidophilus and B.longum infantis grown with nitrate produced minor changes in nitrite or ammonia levels in the cultures. However, when supplied with exogenous nitrite, NO gas was readily produced independently of added nitrate. Bacterial production of lactic acid causes medium acidification that in turn generates NO by non-enzymatic nitrite reduction. In contrast, nitrite was converted to NO by E.coli cultures even at neutral pH. We suggest that the bacterial nitrate reduction to ammonia, as well as the related NO formation in the gut, could be an important aspect of the overall mammalian nitrate/nitrite/NO metabolism and is yet another way in

  7. Sulfur-oxidizing bacteria dominate the microbial diversity shift during the pyrite and low-grade pyrolusite bioleaching process.

    Science.gov (United States)

    Han, Yifan; Ma, Xiaomei; Zhao, Wei; Chang, Yunkang; Zhang, Xiaoxia; Wang, Xingbiao; Wang, Jingjing; Huang, Zhiyong

    2013-10-01

    The microbial ecology of the pyrite-pyrolusite bioleaching system and its interaction with ore has not been well-described. A 16S rRNA gene clone library was created to evaluate changes in the microbial community at different stages of the pyrite-pyrolusite bioleaching process in a shaken flask. The results revealed that the bacterial community was disturbed after 5 days of the reaction. Phylogenetic analysis of 16S rRNA sequences demonstrated that the predominant microorganisms were members of a genus of sulfur-oxidizing bacteria, Thiomonas sp., that subsequently remained dominant during the bioleaching process. Compared with iron-oxidizing bacteria, sulfur-oxidizing bacteria were more favorable to the pyrite-pyrolusite bioleaching system. Decreased pH due to microbial acid production was an important condition for bioleaching efficiency. Iron-oxidizing bacteria competed for pyrite reduction power with Mn(IV) in pyrolusite under specific conditions. These results extend our knowledge of microbial dynamics during pyrite-pyrolusite bioleaching, which is a key issue to improve commercial applications. Copyright © 2013 The Society for Biotechnology, Japan. Published by Elsevier B.V. All rights reserved.

  8. The study of metal sulphide nanomaterials obtained by chemical bath deposition and hot-injection technique

    International Nuclear Information System (INIS)

    Maraeva, E V; Alexandrova, O A; Levitskiy, V S; Mazing, D S; Moshnikov, V A; Shupta, A A; Spivak, Yu M; Forostyanaya, N A; Maskaeva, L N; Markov, V Ph; Tulenin, S S

    2015-01-01

    In this study lead sulphide – cadmium sulphide based layers were obtained through chemical deposition of water solutions and cadmium sulphide quantum dots were formed through hot-injection technique. The article discusses the results of surface investigations with the use of atomic force microscopy, Raman spectroscopy and photoluminescence measurements. (paper)

  9. Substrate and nutrient limitation of ammonia-oxidizing bacteria and archaea in temperate forest soil

    Science.gov (United States)

    J.S. Norman; J.E. Barrett

    2014-01-01

    Ammonia-oxidizing microbes control the rate-limiting step of nitrification, a critical ecosystem process, which affects retention and mobility of nitrogen in soil ecosystems. This study investigated substrate (NH4þ) and nutrient (K and P) limitation of ammonia-oxidizing bacteria (AOB) and ammonia-oxidizing archaea (AOA) in temperate forest soils at Coweeta Hydrologic...

  10. Detection, phylogeny and population dynamics of syntrophic propionate - oxidizing bacteria in anaerobic granular sludge

    NARCIS (Netherlands)

    Harmsen, H.J.M.

    1996-01-01


    The research described this thesis concerns the diversity and phylogeny of syntrophic propionate-oxidizing bacteria and their ecology in granular sludge, from which they were obtained. 16S rRNA was used as a molecular marker to study both the phylogeny and the ecology of these bacteria.

  11. Grazing of particle-associated bacteria-an elimination of the non-viable fraction.

    Science.gov (United States)

    Gonsalves, Maria-Judith; Fernandes, Sheryl Oliveira; Priya, Madasamy Lakshmi; LokaBharathi, Ponnapakkam Adikesavan

    Quantification of bacteria being grazed by microzooplankton is gaining importance since they serve as energy subsidies for higher trophic levels which consequently influence fish production. Hence, grazing pressure on viable and non-viable fraction of free and particle-associated bacteria in a tropical estuary controlled mainly by protist grazers was estimated using the seawater dilution technique. In vitro incubations over a period of 42h showed that at the end of 24h, growth coefficient (k) of particle-associated bacteria was 9 times higher at 0.546 than that of free forms. Further, 'k' value of viable cells on particles was double that of free forms at 0.016 and 0.007, respectively. While bacteria associated with particles were grazed (coefficient of removal (g)=0.564), the free forms were relatively less grazed indicating that particle-associated bacteria were exposed to grazers in these waters. Among the viable and non-viable forms, 'g' of non-viable fraction (particle-associated bacteria=0.615, Free=0.0086) was much greater than the viable fraction (particle-associated bacteria=0.056, Free=0.068). Thus, grazing on viable cells was relatively low in both the free and attached states. These observations suggest that non-viable forms of particle-associated bacteria were more prone to grazing and were weeded out leaving the viable cells to replenish the bacterial standing stock. Particle colonization could thus be a temporary refuge for the "persistent variants" where the viable fraction multiply and release their progeny. Copyright © 2016 Sociedade Brasileira de Microbiologia. Published by Elsevier Editora Ltda. All rights reserved.

  12. Grazing of particle-associated bacteria-an elimination of the non-viable fraction

    Directory of Open Access Journals (Sweden)

    Maria-Judith Gonsalves

    Full Text Available Abstract Quantification of bacteria being grazed by microzooplankton is gaining importance since they serve as energy subsidies for higher trophic levels which consequently influence fish production. Hence, grazing pressure on viable and non-viable fraction of free and particle-associated bacteria in a tropical estuary controlled mainly by protist grazers was estimated using the seawater dilution technique. In vitro incubations over a period of 42 h showed that at the end of 24 h, growth coefficient (k of particle-associated bacteria was 9 times higher at 0.546 than that of free forms. Further, ‘k’ value of viable cells on particles was double that of free forms at 0.016 and 0.007, respectively. While bacteria associated with particles were grazed (coefficient of removal (g = 0.564, the free forms were relatively less grazed indicating that particle-associated bacteria were exposed to grazers in these waters. Among the viable and non-viable forms, ‘g’ of non-viable fraction (particle-associated bacteria = 0.615, Free = 0.0086 was much greater than the viable fraction (particle-associated bacteria = 0.056, Free = 0.068. Thus, grazing on viable cells was relatively low in both the free and attached states. These observations suggest that non-viable forms of particle-associated bacteria were more prone to grazing and were weeded out leaving the viable cells to replenish the bacterial standing stock. Particle colonization could thus be a temporary refuge for the “persistent variants” where the viable fraction multiply and release their progeny.

  13. Heterologous surface display on lactic acid bacteria: non-GMO alternative?

    Science.gov (United States)

    Zadravec, Petra; Štrukelj, Borut; Berlec, Aleš

    2015-01-01

    Lactic acid bacteria (LAB) are food-grade hosts for surface display with potential applications in food and therapy. Alternative approaches to surface display on LAB would avoid the use of recombinant DNA technology and genetically-modified organism (GMO)-related regulatory requirements. Non-covalent surface display of proteins can be achieved by fusing them to various cell-wall binding domains, of which the Lysine motif domain (LysM) is particularly well studied. Fusion proteins have been isolated from recombinant bacteria or from their growth medium and displayed on unmodified bacteria, enabling heterologous surface display. This was demonstrated on non-viable cells devoid of protein content, termed bacteria-like particles, and on various species of genus Lactobacillus. Of the latter, Lactobacillus salivarius ATCC 11741 was recently shown to be particularly amenable for LysM-mediated display. Possible regulatory implications of heterologous surface display are discussed, particularly those relevant for the European Union.

  14. Identification of a fourth family of lycopene cyclases in photosynthetic bacteria

    OpenAIRE

    Maresca, Julia A.; Graham, Joel E.; Wu, Martin; Eisen, Jonathan A.; Bryant, Donald A.

    2007-01-01

    A fourth and large family of lycopene cyclases was identified in photosynthetic prokaryotes. The first member of this family, encoded by the cruA gene of the green sulfur bacterium Chlorobium tepidum, was identified in a complementation assay with a lycopene-producing strain of Escherichia coli. Orthologs of cruA are found in all available green sulfur bacterial genomes and in all cyanobacterial genomes that lack genes encoding CrtL- or CrtY-type lycopene cyclases. The cyanobacterium Synechoc...

  15. Anaerobic ammonium oxidation by anammox bacteria in the Black Sea RID B-8834-2011

    DEFF Research Database (Denmark)

    Kuypers, MMM; Sliekers, AO; Lavik, G.

    2003-01-01

    The availability of fixed inorganic nitrogen (nitrate, nitrite and ammonium) limits primary productivity in many oceanic regions(1). The conversion of nitrate to N(2) by heterotrophic bacteria (denitrification) is believed to be the only important sink for fixed inorganic nitrogen in the ocean(2......). Here we provide evidence for bacteria that anaerobically oxidize ammonium with nitrite to N(2) in the world's largest anoxic basin, the Black Sea. Phylogenetic analysis of 16S ribosomal RNA gene sequences shows that these bacteria are related to members of the order Planctomycetales performing...... the anammox (anaerobic ammonium oxidation) process in ammonium-removing bioreactors(3). Nutrient profiles, fluorescently labelled RNA probes, (15)N tracer experiments and the distribution of specific 'ladderane' membrane lipids(4) indicate that ammonium diffusing upwards from the anoxic deep water is consumed...

  16. Effect of composition and. gamma. -irradiation on crystal lattice spacing of lead sulphide

    Energy Technology Data Exchange (ETDEWEB)

    Indenbaum, G V; Novikova, S F; Vanyukov, A V; Dvorkin, Yu V [Moskovskij Inst. Stali i Splavov (USSR)

    1981-02-01

    Value of crystal lattice spacing of lead sulphide after annealing and quenching at temperatures of 600, 700 and 800 deg C are found for the both boundaries of homogeneity region with error of 5x10/sup -5/A. The effect of ..gamma.. irradiation with quanta energy of 1.25 MeV from /sup 60/Co source (10/sup 4/, 10/sup 5/ and 10/sup 6/ G/kg) on crystal lattice spacing of lead sulphide preliminary saturated with sulphur or lead at 600 deg C, is studied. It is established that lattice spacing of lead sulphide depends on material prehistory and decreases at room temperature after quenching and ..gamma..-irradiation. Effect of natural ageing of lead sulphide is explained by the decomposition of nonstechiometric solid solution, supersaturated with components, at room temperature.

  17. Investigation of sulphide in core drilled boreholes KLX06, KAS03 and KAS09 at Laxemar and Aespoe Chemical-, microbiological- and dissolved gas data from groundwater in four borehole sections

    Energy Technology Data Exchange (ETDEWEB)

    Rosdahl, Anette (Geosigma AB (Sweden)); Pedersen, Karsten; Hallbeck, Lotta (Microbial Analytics Sweden AB (Sweden)); Wallin, Bill (Geokema AB (Sweden))

    2011-01-15

    This report describes a study performed during 2009 which focused on the production of sulphide (microbial sulphate reduction) in deep groundwater that was implemented in the core drilled boreholes KLX06, -475 to 482 meter above sea level, m a s l, KAS03,-97 to 241 and -613 to 984 m a s l, and KAS09, -96 to -125 m a s l, at Laxemar and Aspo. The study aimed to increase knowledge of background groundwater levels of sulphide and its variations in time and space through the analysis of sulphide and parameters related to sulphide production. Sampling of groundwater was conducted in three core drilled boreholes of varying age as time series with continuous pumping and as single samples. The analysis program covered chemical parameters (pH, chloride, sulphate, iron, and organic carbon), dissolved gas composition, stable isotopes in groundwater (delta2H, delta18O, delta34S, delta13C), stable isotopes of gaseous compounds (delta2H, delta13C, delta18O), microbiological parameters (sulphate- and iron reducing bacteria, SRB and IRB), phthalates and low molecular mass organic acids (LMMOA). The sampling in KLX06 was carried out as time series with a 9 week pause in pumping. When the water volume discharged was about 150 times that of the packer-isolated borehole section, sulphides decreased from 7 mg L-1 to 0.05 mg L-1 and the salinity increased from 740 to 1,480 mg L-1. After a 9 weeks pause in pumping, the sulphide concentration and salinity again approached the original values, i.e. 7 mg L-1 of sulphide and 450 mg L-1 of chloride. The SRB and IRB showed high concentrations that were reduced during pumping in the borehole. The water in the standpipe which has a different water composition than the groundwater, also showed similar high concentrations of sulphide and SRB. The standpipe is a plastic pipe in the wider upper part of the borehole; connected with the tube from the packer of the borehole section and used to accommodate a filter and a groundwater pump when collecting

  18. Investigation of sulphide in core drilled boreholes KLX06, KAS03 and KAS09 at Laxemar and Aespoe: Chemical-, microbiological- and dissolved gas data from groundwater in four borehole sections

    International Nuclear Information System (INIS)

    Rosdahl, Anette; Pedersen, Karsten; Hallbeck, Lotta; Wallin, Bill

    2011-01-01

    This report describes a study performed during 2009 which focused on the production of sulphide (microbial sulphate reduction) in deep groundwater that was implemented in the core drilled boreholes KLX06, -475 to 482 meter above sea level, m a s l, KAS03,-97 to 241 and -613 to 984 m a s l, and KAS09, -96 to -125 m a s l, at Laxemar and Aspo. The study aimed to increase knowledge of background groundwater levels of sulphide and its variations in time and space through the analysis of sulphide and parameters related to sulphide production. Sampling of groundwater was conducted in three core drilled boreholes of varying age as time series with continuous pumping and as single samples. The analysis program covered chemical parameters (pH, chloride, sulphate, iron, and organic carbon), dissolved gas composition, stable isotopes in groundwater (δ 2 H, δ 18 O, δ 34 S, δ 13 C), stable isotopes of gaseous compounds (δ 2 H, δ 13 C, δ 18 O), microbiological parameters (sulphate- and iron reducing bacteria, SRB and IRB), phthalates and low molecular mass organic acids (LMMOA). The sampling in KLX06 was carried out as time series with a 9 week pause in pumping. When the water volume discharged was about 150 times that of the packer-isolated borehole section, sulphides decreased from 7 mg L -1 to 0.05 mg L -1 and the salinity increased from 740 to 1,480 mg L -1 . After a 9 weeks pause in pumping, the sulphide concentration and salinity again approached the original values, i.e. 7 mg L -1 of sulphide and 450 mg L -1 of chloride. The SRB and IRB showed high concentrations that were reduced during pumping in the borehole. The water in the standpipe which has a different water composition than the groundwater, also showed similar high concentrations of sulphide and SRB. The standpipe is a plastic pipe in the wider upper part of the borehole; connected with the tube from the packer of the borehole section and used to accommodate a filter and a groundwater pump when collecting

  19. Oxygen, nitrogen and sulphide fluxes in the Black Sea

    Directory of Open Access Journals (Sweden)

    S.K. KONOVALOV

    2000-12-01

    Full Text Available The fluxes and production/consumption rates of oxygen, nitrate, ammonium and sulphide are estimated in the paper utilising results of the 1.5-dimensional stationary model of vertical exchange in the Black Sea (Samodurov & Ivanov, 1998. The profiles of the vertical flux and rate of production/consumption of these substances have revealed a number of intriguing features in the biogeochemical nature of the Black Sea. An approximate redox balance of the counter-fluxes of nitrate and ammonium into the sub-oxic zone has been revealed confirming that intensive denitrification may be the primary loss of nitrogen in the Black Sea. A low ratio of the nitrate stock to the flux of nitrate from the oxycline confirms the possibility of prominent changes in the distribution of nitrate on the time scale of a year. The ratio of the nitrate to oxygen vertical flux has revealed a lack of nitrate in the oxycline above the nitrate maximum. The lateral (related to the "Bosporus plume" flux of oxygen in the layer of the main pycnocline appears to be very important for the existing biogeochemical structure of the Black sea water column being the reason of sulphide consumption inside the anoxic zone and changes in the ammonium-sulphide stoichiometry of the anoxic zone, the primary reason of the existence of the sub-oxic layer and the basic reason of relative stability of the sulphide onset.

  20. Bacteria-mediated arsenic oxidation and reduction in the growth media of arsenic hyperaccumulator Pteris vittata.

    Science.gov (United States)

    Wang, Xin; Rathinasabapathi, Bala; de Oliveira, Letuzia Maria; Guilherme, Luiz R G; Ma, Lena Q

    2012-10-16

    Microbes play an important role in arsenic transformation and cycling in the environment. Microbial arsenic oxidation and reduction were demonstrated in the growth media of arsenic hyperaccumulator Pteris vittata L. All arsenite (AsIII) at 0.1 mM in the media was oxidized after 48 h incubation. Oxidation was largely inhibited by antibiotics, indicating that bacteria played a dominant role. To identify AsIII oxidizing bacteria, degenerate primers were used to amplify ∼500 bp of the AsIII oxidase gene aioA (aroA) using DNA extracted from the media. One aioA (aroA)-like sequence (MG-1, tentatively identified as Acinetobacter sp.) was amplified, exhibiting 82% and 91% identity in terms of gene and deduced protein sequence to those from Acinetobacter sp. 33. In addition, four bacterial strains with different arsenic tolerance were isolated and identified as Comamonas sp.C-1, Flavobacterium sp. C-2, Staphylococcus sp. C-3, and Pseudomonas sp. C-4 using carbon utilization, fatty acid profiles, and/or sequencing 16s rRNA gene. These isolates exhibited dual capacity for both AsV reduction and AsIII oxidation under ambient conditions. Arsenic-resistant bacteria with strong AsIII oxidizing ability may have potential to improve bioremediation of AsIII-contaminated water using P. vittata and/or other biochemical strategies.

  1. Bacterial Reduction Of Barium Sulphate By Sulphate-Reducing Bacteria

    Directory of Open Access Journals (Sweden)

    Luptáková Alena

    2015-12-01

    Full Text Available Acid mine drainage (AMD is a worldwide problem leading to contamination of water sources. AMD are characterized by low pH and high content of heavy metals and sulphates. The barium salts application presents one of the methods for the sulphates removing from AMD. Barium chloride, barium hydroxide and barium sulphide are used for the sulphates precipitation in the form of barium sulphate. Because of high investment costs of barium salts, barium sulphide is recycled from barium sulphate precipitates. It can be recycled by thermic or bacterial reduction of barium sulphate. The aim of our study was to verify experimentally the possibility of the bacterial transformation of BaSO4 to BaS by sulphate-reducing bacteria. Applied BaSO4 came from experiments of sulphates removal from Smolnik AMD using BaCl2.

  2. Quantum transport in the FMO photosynthetic light-harvesting complex.

    Science.gov (United States)

    Karafyllidis, Ioannis G

    2017-06-01

    The very high light-harvesting efficiency of natural photosynthetic systems in conjunction with recent experiments, which showed quantum-coherent energy transfer in photosynthetic complexes, raised questions regarding the presence of non-trivial quantum effects in photosynthesis. Grover quantum search, quantum walks, and entanglement have been investigated as possible effects that lead to this efficiency. Here we explain the near-unit photosynthetic efficiency without invoking non-trivial quantum effects. Instead, we use non-equilibrium Green's functions, a mesoscopic method used to study transport in nano-conductors to compute the transmission function of the Fenna-Matthews-Olson (FMO) complex using an experimentally derived exciton Hamiltonian. The chlorosome antenna and the reaction center play the role of input and output contacts, connected to the FMO complex. We show that there are two channels for which the transmission is almost unity. Our analysis also revealed a dephasing-driven regulation mechanism that maintains the efficiency in the presence of varying dephasing potentials.

  3. Improved sulphate removal rates at increased sulphide concentration in the sulphidogenic bioreactor

    CSIR Research Space (South Africa)

    Greben, HA

    2005-07-01

    Full Text Available The product of the biological sulphate reduction is sulphide. High concentrations of molecular H2S(g) can be inhibitory for microbial activity, especially at a reactor pH of 6 to 7. This paper focuses on the effect of high sulphide concentrations...

  4. Ureolytic/Non-Ureolytic Bacteria Co-Cultured Self-Healing Agent for Cementitious Materials Crack Repair

    Directory of Open Access Journals (Sweden)

    Hyeong Min Son

    2018-05-01

    Full Text Available The present study investigated the CaCO3 precipitation performance of ureolytic and non-ureolytic bacteria co-cultured as a self-healing agent for cementitious materials crack repair. Three different inoculum ratios of ureolytic Sporosarcina pasteurii and non-ureolytic Bacillus thuringiensis (10:0, 8:2, or 5:5 were used. The effect of coculturing ureolytic and non-ureolytic bacteria on microbial metabolism was investigated by measuring the rate of growth in urea-containing medium and the rate of NH4+ and CaCO3 production in urea–calcium lactate medium. The self-healing efficiency of co-cultured bacteria was examined by exposing cement mortar specimens with predefined cracks to media containing single urease-producing or co-cultured bacteria. The obtained results provide new findings, where CaCO3 precipitation is improved by co-culturing ureolytic and non-ureolytic bacteria, owing to the relatively faster growth rate of non-ureolytic bacteria. The crack filling rate correlated with the width of crack, in particular, specimens with a smaller crack width showed the faster filling effect, indicating that the crack width can be a dominant factor influencing the CaCO3 precipitation capacity of co-cultured bacteria.

  5. Continuous culture enrichments of ammonia-oxidizing bacteria at low ammonium concentrations

    NARCIS (Netherlands)

    Bollmann, A.; Laanbroek, H.J.

    2001-01-01

    Until now enrichments of ammonia-oxidizing bacteria from natural ammonium-limited environments have been performed mainly in the presence of much higher ammonia concentrations than those present in the natural environment and many have resulted in the enrichment and isolation of environmentally less

  6. Continuous culture enrichments of ammonia-oxidizing bacteria at low ammonium concentrations

    NARCIS (Netherlands)

    Bollmann, A.; Laanbroek, H.J.

    2001-01-01

    Until now enrichments of ammonia-oxidizing bacteria from natural ammonium-limited environments have been performed mainly in the presence of much higher ammonia concentrations than those present in the natural environment and many have resulted in the enrichment and isolation of environmentally

  7. Neutrophilic iron-oxidizing bacteria: occurrence and relevance in biological drinking water treatment

    DEFF Research Database (Denmark)

    Gülay, Arda; Musovic, Sanin; Albrechtsen, Hans-Jørgen

    2013-01-01

    Rapid sand filtration (RSF) is an economical way to treat anoxic groundwater around the world. It consists of groundwater aeration followed by passage through a sand filter. The oxidation and removal of ferrous iron, which is commonly found in anoxic groundwaters, is often believed to be a fully...... role of FeOB in iron removal at waterworks using RSF technologies....... physicochemical process. However, persistently low temperatures in RSF across Denmark may negatively affect the kinetics of chemical oxidation. The slower chemical oxidation of ferrous iron may increase the chances for iron bioconversion by neutrophilic iron-oxidizing bacteria (FeOB), which are found naturally...

  8. Interactions between ammonia and nitrite oxidizing bacteria in co-cultures: Is there evidence for mutualism, commensalism, or competition?

    Energy Technology Data Exchange (ETDEWEB)

    Sayavedra-Soto, Luis [Oregon State Univ., Corvallis, OR (United States); Arp, Daniel [Oregon State Univ., Corvallis, OR (United States)

    2017-08-01

    Nitrification is a two-step environmental microbial process in the nitrogen cycle in which ammonia is oxidized to nitrate. Ammonia-oxidizing bacteria and archaea oxidize ammonia to nitrite and nitrite is oxidized to nitrate by nitrite-oxidizing bacteria. These microorganisms, which likely act in concert in a microbial community, play critical roles in the movement of inorganic N in soils, sediments and waters and are essential to the balance of the nitrogen cycle. Anthropogenic activity has altered the balance of the nitrogen cycle through agriculture practices and organic waste byproducts. Through their influence on available N for plant growth, nitrifying microorganisms influence plant productivity for food and fiber production and the associated carbon sequestration. N Fertilizer production, primarily as ammonia, requires large inputs of natural gas and hydrogen. In croplands fertilized with ammonia-based fertilizers, nitrifiers contribute to the mobilization of this N by producing nitrate (NO3-), wasting the energy used in the production and application of ammonia-based fertilizer. The resulting nitrate is readily leached from these soils, oxidized to gaseous N oxides (greenhouse gases), and denitrified to N2 (which is no longer available as a plant N source). Still, ammonia oxidizers are beneficial in the treatment of wastewater and they also show potential to contribute to microbial bioremediation strategies for clean up of environments contaminated with chlorinated hydrocarbons. Mitigation of the negative effects and exploitation of the beneficial effects of nitrifiers will be facilitated by a systems-level understanding of the interactions of ammonia-oxidizing bacteria and nitrite-oxidizing bacteria with the environment and with each other.

  9. A photosynthetic-plasmonic-voltaic cell: Excitation of photosynthetic bacteria and current collection through a plasmonic substrate

    International Nuclear Information System (INIS)

    Samsonoff, Nathan; Ooms, Matthew D.; Sinton, David

    2014-01-01

    Excitation of photosynthetic biofilms using surface-confined evanescent light fields enables energy dense photobioreactors, while electrode-adhered biofilms can provide electricity directly. Here, we demonstrate concurrent light delivery and electron transport through a plasmonically excited metal film. Biofilms of cyanobacterium Synechococcus bacillaris on 50-nm gold films are excited via the Kretschmann configuration at λ = 670 nm. Cells show light/dark response to plasmonic excitation and grow denser biofilms, closer to the electrode surface, as compared to the direct irradiated case. Directly irradiated biofilms produced average electrical powers of 5.7 μW/m 2 and plasmonically excited biofilms produced average electrical powers of 5.8 μW/m 2 , with individual biofilms producing as much as 12 μW/m 2

  10. Comparative study of ketoconazole versus selenium sulphide shampoo in pityriasis versicolor

    Directory of Open Access Journals (Sweden)

    Aggarwal K

    2003-03-01

    Full Text Available Forty patients suffering from pityriasis versicolor were treated with either 2% ketoconazole shampoo (20 patients or 2.5% selenium sulphide shampoo (20 patients, once a week for three weeks. On global assessment after one month of start of therapy, 19 (95% out of 20 patients treated with ketoconazole shampoo were cured while one case had mild residual disease. In selenium sulphide shampoo group, 17 (85% out of 20 patients were cured, one had mild residual disease and two had considerable residual disease. No significant difference was observed in the response rates in the two groups. Relapse occurred in one patient of ketoconazole group and two patients of selenium sulphide group during the follow - up period of three months.

  11. Effects of 1-butanol, neomycin and calcium on the photosynthetic ...

    African Journals Online (AJOL)

    ajl yemi

    2011-10-31

    Oct 31, 2011 ... (Shanghai Jierui Bio-Engineering Co., Ltd.) were used in the total. RNA extraction of ..... PC and reverse through calcium removal agent. EGTA indicating .... Photosynthetic characteristics and tolerance to photo- oxidation of ...

  12. Microbiological corrosion of ASTM SA105 carbon steel pipe for industrial fire water usage

    Science.gov (United States)

    Chidambaram, S.; Ashok, K.; Karthik, V.; Venkatakrishnan, P. G.

    2018-02-01

    The large number of metallic systems developed for last few decades against both general uniform corrosion and localized corrosion. Among all microbiological induced corrosion (MIC) is attractive, multidisciplinary and complex in nature. Many chemical processing industries utilizes fresh water for fire service to nullify major/minor fire. One such fire water service line pipe attacked by micro-organisms leads to leakage which is industrially important from safety point of view. Also large numbers of leakage reported in similar fire water service of nearby food processing plant, paper & pulp plant, steel plant, electricity board etc…In present investigation one such industrial fire water service line failure analysis of carbon steel line pipe was analyzed to determine the cause of failure. The water sample subjected to various chemical and bacterial analyses. Turbidity, pH, calcium hardness, free chlorine, oxidation reduction potential, fungi, yeasts, sulphide reducing bacteria (SRB) and total bacteria (TB) were measured on water sample analysis. The corrosion rate was measured on steel samples and corrosion coupon measurements were installed in fire water for validating non flow assisted localized corrosion. The sulphide reducing bacteria (SRB) presents in fire water causes a localized micro biological corrosion attack of line pipe.

  13. Major role of nitrite-oxidizing bacteria in dark ocean carbon fixation

    NARCIS (Netherlands)

    Pachiadaki, M.G.; Sintes, E.; Bergauer, K.; Brown, J.M.; Record, N.R.; Swan, B.K.; Mathyer, M.E.; Hallam, S.J.; López-Garcìa, P.; Takaki, Y.; Nunoura, T.; Woyke, T.; Herndl, G.J.; Stepanauskas, R.

    2017-01-01

    Carbon fixation by chemoautotrophic microorganisms in the dark ocean has a major impact on global carbon cycling and ecological relationships in the ocean’s interior, but the relevant taxa and energy sources remain enigmatic.We show evidence that nitrite-oxidizing bacteria affiliated with the

  14. Arsenite-oxidizing and arsenate-reducing bacteria associated with arsenic-rich groundwater in Taiwan

    Science.gov (United States)

    Liao, Vivian Hsiu-Chuan; Chu, Yu-Ju; Su, Yu-Chen; Hsiao, Sung-Yun; Wei, Chia-Cheng; Liu, Chen-Wuing; Liao, Chung-Min; Shen, Wei-Chiang; Chang, Fi-John

    2011-04-01

    Drinking highly arsenic-contaminated groundwater is a likely cause of blackfoot disease in Taiwan, but microorganisms that potentially control arsenic mobility in the subsurface remain unstudied. The objective of this study was to investigate the relevant arsenite-oxidizing and arsenate-reducing microbial community that exists in highly arsenic-contaminated groundwater in Taiwan. We cultured and identified arsenic-transforming bacteria, analyzed arsenic resistance and transformation, and determined the presence of genetic markers for arsenic transformation. In total, 11 arsenic-transforming bacterial strains with different colony morphologies and varying arsenic transformation abilities were isolated, including 10 facultative anaerobic arsenate-reducing bacteria and one strictly aerobic arsenite-oxidizing bacterium. All of the isolates exhibited high levels of arsenic resistance with minimum inhibitory concentrations of arsenic ranging from 2 to 200 mM. Strain AR-11 was able to rapidly oxidize arsenite to arsenate at concentrations relevant to environmental groundwater samples without the addition of any electron donors or acceptors. We provide evidence that arsenic-reduction activity may be conferred by the ars operon(s) that were not amplified by the designed primers currently in use. The 16S rRNA sequence analysis grouped the isolates into the following genera: Pseudomonas, Bacillus, Psychrobacter, Vibrio, Citrobacter, Enterobacter, and Bosea. Among these genera, we present the first report of the genus Psychrobacter being involved in arsenic reduction. Our results further support the hypothesis that bacteria capable of either oxidizing arsenite or reducing arsenate coexist and are ubiquitous in arsenic-contaminated groundwater.

  15. Influence of thermal light correlations on photosynthetic structures

    Science.gov (United States)

    de Mendoza, Adriana; Manrique, Pedro; Caycedo-Soler, Felipe; Johnson, Neil F.; Rodríguez, Ferney J.; Quiroga, Luis

    2014-03-01

    The thermal light from the sun is characterized by both classical and quantum mechanical correlations. These correlations have left a fingerprint on the natural harvesting structures developed through five billion years of evolutionary pressure, specially in photosynthetic organisms. In this work, based upon previous extensive studies of spatio-temporal correlations of light fields, we hypothesize that structures involving photosensitive pigments like those present in purple bacteria vesicles emerge as an evolutionary response to the different properties of incident light. By using burstiness and memory as measures that quantify higher moments of the photon arrival statistics, we generate photon-time traces. They are used to simulate absorption on detectors spatially extended over regions comparable to these light fields coherence length. Finally, we provide some insights into the connection between these photo-statistical features with the photosynthetic membrane architecture and the lights' spatial correlation. Facultad de Ciencias Uniandes.

  16. The investigation of the kinetics of hydrochemical oxidation of metal sulphides with the aim of determination of the optimal conditions for the selective extraction of molybdenum from ores

    Directory of Open Access Journals (Sweden)

    Lutsik V.

    2005-01-01

    Full Text Available The kinetics of the oxidation of molybdenyte, pyrite and sphalerite in solutions of nitric acid, hydrogen peroxide, and sodium hypochlorite was studied by the rotating disk method. The influence of the molar concentration of reagent, pH of solution, temperature, disk rotation frequency, and duration of measurements on the specific rate of hydrochemical oxidation of sulpfides was determined. The kinetic models allowing to calculate the dissolution rate of sulphides when these parameters change simultaneously were obtained. The conditions of kinetically and diffusion-controlled processes were detected. The details of mechanism of the studied processes were revealed. The nature of intermediate solid products, the reasons and the conditions of their formation as well as the character of their influence on the kinetics of dissolution processes were determined. The probable schemes of interactions corresponding to the observable kinetic dependences were offered. The conditions of the effective and selective molybdenum leaching directly from ore without its concentration were found.

  17. Non-destructive γ-spectrometric determination of mercury and gold in sea water after preconcentration by lead sulphide

    International Nuclear Information System (INIS)

    Alexandrov, S.

    1976-01-01

    A method is described for determination of mercury and gold in sea-water, based on preconcentration of these elements by retention on a column of lead sulphide at pH1 (nitric and sulphuric acids), and γ-spectrometry. Mercury (0.8 +-0.2 μg/l) and gold (6 +- 3 ng/l) have been determined in a sample from the Black Sea, taken near Varna. (author)

  18. Prevention by lactic acid bacteria of the oxidation of human LDL.

    Science.gov (United States)

    Terahara, M; Kurama, S; Takemoto, N

    2001-08-01

    Ether extracts of lactic acid bacteria were analyzed for prevention of the oxidation of erythrocyte membrane and human low-density lipoprotein in vivo. Streptococcus thermophilus 1131 and Lactobacillus delbrueckii subsp. bulgaricus 2038, yogurt starters, were chosen as test-strains, and ether extracts of these cultures were used as samples. Both strain 1131 and strain 2038 produced radical scavengers and inhibited oxidation of erythrocyte membranes and low-density lipoproteins. The antioxidative activity of strain 2038 was higher than that of strain 1131.

  19. Hybrid artificial photosynthetic systems comprising semiconductors as light harvesters and biomimetic complexes as molecular cocatalysts.

    Science.gov (United States)

    Wen, Fuyu; Li, Can

    2013-11-19

    Solar fuel production through artificial photosynthesis may be a key to generating abundant and clean energy, thus addressing the high energy needs of the world's expanding population. As the crucial components of photosynthesis, the artificial photosynthetic system should be composed of a light harvester (e.g., semiconductor or molecular dye), a reduction cocatalyst (e.g., hydrogenase mimic, noble metal), and an oxidation cocatalyst (e.g., photosystem II mimic for oxygen evolution from water oxidation). Solar fuel production catalyzed by an artificial photosynthetic system starts from the absorption of sunlight by the light harvester, where charge separation takes place, followed by a charge transfer to the reduction and oxidation cocatalysts, where redox reaction processes occur. One of the most challenging problems is to develop an artificial photosynthetic solar fuel production system that is both highly efficient and stable. The assembly of cocatalysts on the semiconductor (light harvester) not only can facilitate the charge separation, but also can lower the activation energy or overpotential for the reactions. An efficient light harvester loaded with suitable reduction and oxidation cocatalysts is the key for high efficiency of artificial photosynthetic systems. In this Account, we describe our strategy of hybrid photocatalysts using semiconductors as light harvesters with biomimetic complexes as molecular cocatalysts to construct efficient and stable artificial photosynthetic systems. We chose semiconductor nanoparticles as light harvesters because of their broad spectral absorption and relatively robust properties compared with a natural photosynthesis system. Using biomimetic complexes as cocatalysts can significantly facilitate charge separation via fast charge transfer from the semiconductor to the molecular cocatalysts and also catalyze the chemical reactions of solar fuel production. The hybrid photocatalysts supply us with a platform to study the

  20. Contributions of ammonia-oxidizing archaea and bacteria to nitrification in Oregon forest soils

    Science.gov (United States)

    Xinda Lu; Peter J. Bottomley; David D. Myrold

    2015-01-01

    Ammonia oxidation, the first step of nitrification, is mediated by both ammonia-oxidizing archaea (AOA) and bacteria (AOB); however, the relative contributions of AOA and AOB to soil nitrification are not well understood. In this study we used 1-octyne to discriminate between AOA-and AOB-supported nitrifi-cation determined both in soil-water slurries and in unsaturated...

  1. Starch-degrading enzymes from anaerobic non-clostridial bacteria

    Energy Technology Data Exchange (ETDEWEB)

    Weber, H; Schepers, H J; Troesch, W [Fraunhofer-Institut fuer Grenzflaechen- und Bioverfahrenstechnik (IGB), Stuttgart (Germany, F.R.)

    1990-08-01

    A number of meso- and thermophilic anaerobic starch-degrading non-spore-forming bacteria have been isolated. All the isolates belonging to different genera are strictly anaerobic, as indicated by a catalase-negative reaction, and produce soluble starch-degrading enzymes. Compared to enzymes of aerobic bacteria, those of anaerobic origin mainly show low molecular mass of about 25 000 daltons. Some of the enzymes may have useful applications in the starch industry because of their unusual product pattern, yielding maltotetraose as the main hydrolysis product. (orig.).

  2. Diversity and distribution of planktonic anaerobic ammonium-oxidizing bacteria in the Dongjiang River, China.

    Science.gov (United States)

    Sun, Wei; Xia, Chunyu; Xu, Meiying; Guo, Jun; Wang, Aijie; Sun, Guoping

    2014-12-01

    Anaerobic ammonium-oxidizing (anammox) process has recently been recognized as an important pathway for removing fixed nitrogen (N) from aquatic ecosystems. Anammox organisms are widely distributed in freshwater environments. However, little is known about their presence in the water column of riverine ecosystems. Here, the existence of a diverse anammox community was revealed in the water column of the Dongjiang River by analyzing 16S rRNA and hydrazine oxidation (hzo) genes of anammox bacteria. Phylogenetic analyses of hzo genes showed that Candidatus Jettenia related clades of anammox bacteria were dominant in the river, suggesting the ecological microniche distinction from freshwater/estuary and marine anammox bacteria with Ca. Brocadia and Kuenenia genera mainly detected in freshwater/estuary ecosystems, and Ca. Scalindua genus mainly detected in marine ecosystems. The abundance and diversity of anammox bacteria along the river were both significantly correlated with concentrations of NH4(+)-N based on Pearson and partial correlation analyses. Redundancy analyses showed the contents of NH4(+)-N, NO3(-)-N and the ratio of NH4(+)-N to NO2(-)-N significantly influenced the spatial distributions of anammox bacteria in the water column of the Dongjiang River. These results expanded our understanding of the distribution and potential roles of anammox bacteria in the water column of the river ecosystem. Copyright © 2014 Elsevier GmbH. All rights reserved.

  3. Assessment of the flotability of chalcopyrite, molybdenite and pyrite using biosolids and their main components as collectors for greening the froth flotation of copper sulphide ores.

    OpenAIRE

    Sobarzo, Francisco; Herrera Urbina, Ronaldo; Higueras Higueras, Pablo Leon; Sáez Navarrete, César; Godoy Faúndez, Alex; Reyes Bozo, Lorenzo; Vásquez Bestagno, Jorge

    2014-01-01

    Biosolids and representative compounds of their main components ? humic acids, sugars, and proteins ? have been tested as possible environment-friendly collectors and frothers for the flotation of copper sulphide ores. The floatability of chalcopyrite and molybdenite ? both valuable sulphide minerals present in these ores ? as well as non-valuable pyrite was assessed through Hallimond tube flotation tests. Humic acids exhibit similar collector ability for chalcopyrite and molybdenite as that ...

  4. Differential oxidative and antioxidative response of duckweed Lemna minor toward plant growth promoting/inhibiting bacteria.

    Science.gov (United States)

    Ishizawa, Hidehiro; Kuroda, Masashi; Morikawa, Masaaki; Ike, Michihiko

    2017-09-01

    Bacteria colonizing the plant rhizosphere are believed to positively or negatively affect the host plant productivity. This feature has inspired researchers to engineer such interactions to enhance crop production. However, it remains to be elucidated whether rhizobacteria influences plant oxidative stress vis-a-vis other environmental stressors, and whether such influence is associated with their growth promoting/inhibiting ability. In this study, two plant growth-promoting bacteria (PGPB) and two plant growth-inhibiting bacteria (PGIB) were separately inoculated into axenic duckweed (Lemna minor) culture under laboratory conditions for 4 and 8 days in order to investigate their effects on plant oxidative stress and antioxidant activities. As previously characterized, the inoculation of PGPB and PGIB strains accelerated and reduced the growth of L. minor, respectively. After 4 and 8 days of cultivation, compared to the PGPB strains, the PGIB strains induced larger amounts of O 2 •- , H 2 O 2 , and malondialdehyde (MDA) in duckweed, although all bacterial strains consistently increased O 2 •- content by two times more than that in the aseptic control plants. Activities of five antioxidant enzymes were also elevated by the inoculation of PGIB, confirming the severe oxidative stress condition in plants. These results suggest that the surface attached bacteria affect differently on host oxidative stress and its response, which degree correlates negatively to their effects on plant growth. Copyright © 2017 Elsevier Masson SAS. All rights reserved.

  5. Palladium sulphide (PdS) films as a new thermoelectric sulphide compound

    Energy Technology Data Exchange (ETDEWEB)

    Ares, J.R.; Diaz-Chao, P.; Clamagirand, J.; Macia, M.D.; Ferrer, I.J.; Sanchez, C. [Universidad Autonoma de Madrid (Spain). Lab. de Materiales de Interes en Energias Renovables

    2010-07-01

    Palladium sulphide (PdS) films have been prepared by direct sulphuration of 20 nm thick palladium films at different temperatures (200 C < T < 450 C). Sulphurated films exhibit an unique crystalline phase: PdS. Seebeck coefficient and electrical resistivity of these films are between -110 and -150 {mu}V/K and {proportional_to} 0.08 to 0.8 {omega}cm depending on the sulphuration temperature. Negative sign of Seebeck coefficient indicates an n type conduction in all films. Discussion is focused on the influence of atomic ratio between sulphur and palladium as well as impurities arising from the substrate on transport properties. (orig.)

  6. Iron encrustations on filamentous algae colonized by Gallionella-related bacteria in a metal-polluted freshwater stream

    Science.gov (United States)

    Mori, J. F.; Neu, T. R.; Lu, S.; Händel, M.; Totsche, K. U.; Küsel, K.

    2015-09-01

    Filamentous macroscopic algae were observed in slightly acidic to circumneutral (pH 5.9-6.5), metal-rich stream water that leaked out from a former uranium mining district (Ronneburg, Germany). These algae differed in color and morphology and were encrusted with Fe-deposits. To elucidate their potential interaction with Fe(II)-oxidizing bacteria (FeOB), we collected algal samples at three time points during summer 2013 and studied the algae-bacteria-mineral compositions via confocal laser scanning microscopy (CLSM), scanning electron microscopy (SEM), Fourier transform infrared (FTIR) spectra, and a 16S and 18S rRNA gene-based bacterial and algae community analysis. Surprisingly, sequencing analysis of 18S rRNA gene regions of green and brown algae revealed high homologies with the freshwater algae Tribonema (99.9-100 %). CLSM imaging indicated a loss of active chloroplasts in the algae cells, which may be responsible for the change in color in oxidation under the putative oxygen-saturated conditions that occur in association with photosynthetic algae. Quantitative PCR (polymerase chain reaction) revealed even higher Gallionella-related 16S rRNA gene copy numbers on the surface of green algae compared to the brown algae. The latter harbored a higher microbial diversity, including some putative predators of algae. A loss of chloroplasts in the brown algae could have led to lower photosynthetic activities and reduced EPS production, which is known to affect predator colonization. Collectively, our results suggest the coexistence of oxygen-generating algae Tribonema sp. and strictly microaerophilic neutrophilic FeOB in a heavy metal-rich environment.

  7. Mechanistic modeling of biocorrosion caused by biofilms of sulfate reducing bacteria and acid producing bacteria.

    Science.gov (United States)

    Xu, Dake; Li, Yingchao; Gu, Tingyue

    2016-08-01

    Biocorrosion is also known as microbiologically influenced corrosion (MIC). Most anaerobic MIC cases can be classified into two major types. Type I MIC involves non-oxygen oxidants such as sulfate and nitrate that require biocatalysis for their reduction in the cytoplasm of microbes such as sulfate reducing bacteria (SRB) and nitrate reducing bacteria (NRB). This means that the extracellular electrons from the oxidation of metal such as iron must be transported across cell walls into the cytoplasm. Type II MIC involves oxidants such as protons that are secreted by microbes such as acid producing bacteria (APB). The biofilms in this case supply the locally high concentrations of oxidants that are corrosive without biocatalysis. This work describes a mechanistic model that is based on the biocatalytic cathodic sulfate reduction (BCSR) theory. The model utilizes charge transfer and mass transfer concepts to describe the SRB biocorrosion process. The model also includes a mechanism to describe APB attack based on the local acidic pH at a pit bottom. A pitting prediction software package has been created based on the mechanisms. It predicts long-term pitting rates and worst-case scenarios after calibration using SRB short-term pit depth data. Various parameters can be investigated through computer simulation. Copyright © 2016 Elsevier B.V. All rights reserved.

  8. Anaerobic ammonium-oxidizing bacteria gain antibiotic resistance during long-term acclimatization.

    Science.gov (United States)

    Zhang, Zheng-Zhe; Zhang, Qian-Qian; Guo, Qiong; Chen, Qian-Qian; Jiang, Xiao-Yan; Jin, Ren-Cun

    2015-09-01

    Three broad-spectrum antibiotics, amoxicillin (AMX), florfenicol (FF) and sulfamethazine (SMZ), that inhibit bacteria via different target sites, were selected to evaluate the acute toxicity and long-term effects on anaerobic ammonium oxidation (anammox) granules. The specific anammox activity (SAA) levels reduced by approximately half within the first 3 days in the presence of antibiotics but no nitrite accumulation was observed in continuous-flow experiments. However, the SAA levels and heme c content gradually recovered as the antibiotic concentrations increased. Extracellular polymeric substances (EPS) analysis suggested that anaerobic ammonium-oxidizing bacteria gradually developed a better survival strategy during long-term acclimatization, which reduced the antibiotic stress via increased EPS secretion that provided a protective 'cocoon.' In terms of nitrogen removal efficiency, anammox granules could resist 60 mg-AMX L(-1), 10 mg-FF L(-1) and 100 mg-SMZ L(-1). This study supported the feasibility of using anammox granules to treat antibiotic-containing wastewater. Copyright © 2015 Elsevier Ltd. All rights reserved.

  9. Rescuing ethanol photosynthetic production of cyanobacteria in non-sterilized outdoor cultivations with a bicarbonate-based pH-rising strategy.

    Science.gov (United States)

    Zhu, Zhi; Luan, Guodong; Tan, Xiaoming; Zhang, Haocui; Lu, Xuefeng

    2017-01-01

    Ethanol photosynthetic production based on cyanobacteria cell factories utilizing CO 2 and solar energy provides an attractive solution for sustainable production of green fuels. However, the scaling up processes of cyanobacteria cell factories were usually threatened or even devastated by biocontaminations, which restricted biomass or products accumulations of cyanobacteria cells. Thus it is of great significance to develop reliable biocontamination-controlling strategies for promoting ethanol photosynthetic production in large scales. The scaling up process of a previously developed Synechocystis strain Syn-HZ24 for ethanol synthesis was severely inhibited and devastated by a specific contaminant, Pannonibacter phragmitetus , which overcame the growths of cyanobacteria cells and completely consumed the ethanol accumulation in the cultivation systems. Physiological analysis revealed that growths and ethanol-consuming activities of the contaminant were sensitive to alkaline conditions, while ethanol-synthesizing cyanobacteria strain Syn-HZ24 could tolerate alkaline pH conditions as high as 11.0, indicating that pH-increasing strategy might be a feasible approach for rescuing ethanol photosynthetic production in outdoor cultivation systems. Thus, we designed and evaluated a Bicarbonate-based Integrated Carbon Capture System (BICCS) derived pH-rising strategy to rescue the ethanol photosynthetic production in non-sterilized conditions. In lab scale artificially simulated systems, pH values of BG11 culture medium were maintained around 11.0 by 180 mM NaHCO 3 and air steam, under which the infection of Pannonibacter phragmitetus was significantly restricted, recovering ethanol production of Syn-HZ24 by about 80%. As for outdoor cultivations, ethanol photosynthetic production of Syn-HZ24 was also successfully rescued by the BICCS-derived pH-rising strategy, obtaining a final ethanol concentration of 0.9 g/L after 10 days cultivation. In this work, a novel product

  10. A photosynthetic-plasmonic-voltaic cell: Excitation of photosynthetic bacteria and current collection through a plasmonic substrate

    Energy Technology Data Exchange (ETDEWEB)

    Samsonoff, Nathan; Ooms, Matthew D.; Sinton, David [Department of Mechanical and Industrial Engineering, and Institute for Sustainable Energy, University of Toronto, Toronto M5S 3G8 (Canada)

    2014-01-27

    Excitation of photosynthetic biofilms using surface-confined evanescent light fields enables energy dense photobioreactors, while electrode-adhered biofilms can provide electricity directly. Here, we demonstrate concurrent light delivery and electron transport through a plasmonically excited metal film. Biofilms of cyanobacterium Synechococcus bacillaris on 50-nm gold films are excited via the Kretschmann configuration at λ = 670 nm. Cells show light/dark response to plasmonic excitation and grow denser biofilms, closer to the electrode surface, as compared to the direct irradiated case. Directly irradiated biofilms produced average electrical powers of 5.7 μW/m{sup 2} and plasmonically excited biofilms produced average electrical powers of 5.8 μW/m{sup 2}, with individual biofilms producing as much as 12 μW/m{sup 2}.

  11. Photosynthetic Reaction Centres-from Basic Research to Application

    Directory of Open Access Journals (Sweden)

    László NAGY

    2010-06-01

    Full Text Available There is no doubt that studying the photosynthetic conversion of light into chemical energy is extremely important in many points of view; e.g., 1 technical-in order to improve the utilization of the solar energy; 2 food production-to improve the photosynthetic production of plants in agriculture; 3 ecology-keeping the primer production in ecosystems in the biosphere balanced, etc. In the photosynthetic reaction centre protein, RC, light energy is converted by a quantum yield of almost unity. There is no such a system designed by human which is able to do that. The RC purified from purple bacteria provides an extremely unique system for studying the requirements for high efficiency conversion of light into electrochemical energy. Thanks to the recent structural (e.g. crystallography (Nobel prize to Michel, Deisenhofer, Huber and functional (Nobel prize to Marcus results together with the works of molecular biology, computer- and electro-techniques, a wealth of information made a relatively clear picture about the kinetics, energetics and stabilization of electron transport within this protein that opens possibilities for new generation practical applications. In this paper we provide a short summary of fields in which the reaction centre protein can be important from practical points of view.

  12. Community composition and activity of anaerobic ammonium oxidation bacteria in the rhizosphere of salt-marsh grass Spartina alterniflora.

    Science.gov (United States)

    Zheng, Yanling; Hou, Lijun; Liu, Min; Yin, Guoyu; Gao, Juan; Jiang, Xiaofen; Lin, Xianbiao; Li, Xiaofei; Yu, Chendi; Wang, Rong

    2016-09-01

    Anaerobic ammonium oxidation (anammox) as an important nitrogen removal pathway has been investigated in intertidal marshes. However, the rhizosphere-driven anammox process in these ecosystems is largely overlooked so far. In this study, the community dynamics and activities of anammox bacteria in the rhizosphere and non-rhizosphere sediments of salt-marsh grass Spartina alterniflora (a widely distributed plant in estuaries and intertidal ecosystems) were investigated using clone library analysis, quantitative PCR assay, and isotope-tracing technique. Phylogenetic analysis showed that anammox bacterial diversity was higher in the non-rhizosphere sediments (Scalindua and Kuenenia) compared with the rhizosphere zone (only Scalindua genus). Higher abundance of anammox bacteria was detected in the rhizosphere (6.46 × 10(6)-1.56 × 10(7) copies g(-1)), which was about 1.5-fold higher in comparison with that in the non-rhizosphere zone (4.22 × 10(6)-1.12 × 10(7) copies g(-1)). Nitrogen isotope-tracing experiments indicated that the anammox process in the rhizosphere contributed to 12-14 % N2 generation with rates of 0.43-1.58 nmol N g(-1) h(-1), while anammox activity in the non-rhizosphere zone contributed to only 4-7 % N2 production with significantly lower activities (0.28-0.83 nmol N g(-1) h(-1)). Overall, we propose that the rhizosphere microenvironment in intertidal marshes might provide a favorable niche for anammox bacteria and thus plays an important role in nitrogen cycling.

  13. New exploration methods for platinum and rhodium deposits poor in base-metal sulphides

    DEFF Research Database (Denmark)

    Ohnenstetter, M.; Johan, Z.; Cocherie, A.

    1999-01-01

    Platinum-group elements (PGE) are typically associated with mafic and ultramafic intrusive rocks and the main exploration targets are layers and zones rich in PGE-bearing sulphides. Some PGE occurences, however, are in sulphide-poor situations and this raises the possibility that PGE deposits may...

  14. Bacterial consortium for copper extraction from sulphide ore consisting mainly of chalcopyrite

    Directory of Open Access Journals (Sweden)

    E. Romo

    2013-01-01

    Full Text Available The mining industry is looking forward for bacterial consortia for economic extraction of copper from low-grade ores. The main objective was to determine an optimal bacterial consortium from several bacterial strains to obtain copper from the leach of chalcopyrite. The major native bacterial species involved in the bioleaching of sulphide ore (Acidithiobacillus ferrooxidans, Acidithiobacillus thiooxidans, Leptospirillum ferrooxidans and Leptospirillum ferriphilum were isolated and the assays were performed with individual bacteria and in combination with At. thiooxidans. In conclusion, it was found that the consortium integrated by At. ferrooxidans and At. thiooxidans removed 70% of copper in 35 days from the selected ore, showing significant differences with the other consortia, which removed only 35% of copper in 35 days. To validate the assays was done an escalation in columns, where the bacterial consortium achieved a higher percentage of copper extraction regarding to control.

  15. Stability of integral membrane proteins under high hydrostatic pressure: the LH2 and LH3 antenna pigment-protein complexes from photosynthetic bacteria.

    Science.gov (United States)

    Kangur, Liina; Timpmann, Kõu; Freiberg, Arvi

    2008-07-03

    The bacteriochlorophyll a-containing LH2 and LH3 antenna complexes are the integral membrane proteins that catalyze the photosynthetic process in purple photosynthetic bacteria. The LH2 complex from Rhodobacter sphaeroides shows characteristic strong absorbance at 800 and 850 nm due to the pigment molecules confined in two separate areas of the protein. In the LH3 complex from Rhodopesudomonas acidophila the corresponding bands peak at 800 and 820 nm. Using the bacteriochlorophyll a cofactors as intrinsic probes to monitor local changes in the protein structure, we investigate spectral responses of the antenna complexes to very high hydrostatic pressures up to 2.5 GPa when embedded into natural membrane environment or extracted with detergent. We first demonstrate that high pressure does induce significant alterations to the tertiary structure of the proteins not only in proximity of the 800 nm-absorbing bacteriochlorophyll a molecules known previously (Gall, A.; et al. Biochemistry 2003, 42, 13019) but also of the 850 nm- and 820 nm-absorbing molecules, including breakage of the hydrogen bond they are involved in. The membrane-protected complexes appear more resilient to damaging effects of the compression compared with the complexes extracted into mixed detergent-buffer environment. Increased resistance of the isolated complexes is observed at high protein concentration resulting aggregation as well as when cosolvent (glycerol) is added into the solution. These stability variations correlate with ability of penetration of the surrounding polar solvent (water) into the hydrophobic protein interiors, being thus the principal reason of the pressure-induced denaturation of the proteins. Considerable variability of elastic properties of the isolated complexes was also observed, tentatively assigned to heterogeneous protein packing in detergent micelles. While a number of the isolated complexes release most of their bacteriochlorophyll a content under high pressure

  16. Selective isolation of potentially phosphate-mobilizing, biosurfactant-producing and biodegradative bacteria associated with a sub-Arctic, terricolous lichen, Peltigera membranacea.

    Science.gov (United States)

    Sigurbjörnsdóttir, Margrét Auður; Vilhelmsson, Oddur

    2016-06-01

    Lichens are the symbiotic association of fungi and a photosynthetic partner. However, non-phototrophic bacteria are also present and thought to comprise an essential part of the lichen symbiosis, although their roles in the symbiosis are still poorly understood. In this study, we isolated and characterized 110 non-phototrophic bacterial lichen associates from thalli of the terricolous lichen Peltigera membranacea The biodegradative and other nutrient-scavenging properties studied among selected isolates were phosphate mobilization, biosurfactant production and degradation of napthalene and several biopolymers, suggesting organic and inorganic nutrient scavenging as roles for bacteria in the lichen symbiotic association. Identification by partial 16S rRNA gene sequencing revealed that the isolates comprised 18 genera within the Proteobacteria, Actinobacteria, Bacteroidetes and Firmicutes, many with high similarities with bacteria typically associated with the plant and rhizosphere environments, could suggest that plants may be important sources of terricolous lichen-associated bacteria, or vice versa. © FEMS 2016. All rights reserved. For permissions, please e-mail: journals.permissions@oup.com.

  17. Anaerobic Oxidation of Methane Coupled to Nitrite Reduction by Halophilic Marine NC10 Bacteria.

    Science.gov (United States)

    He, Zhanfei; Geng, Sha; Cai, Chaoyang; Liu, Shuai; Liu, Yan; Pan, Yawei; Lou, Liping; Zheng, Ping; Xu, Xinhua; Hu, Baolan

    2015-08-15

    Anaerobic oxidation of methane (AOM) coupled to nitrite reduction is a novel AOM process that is mediated by denitrifying methanotrophs. To date, enrichments of these denitrifying methanotrophs have been confined to freshwater systems; however, the recent findings of 16S rRNA and pmoA gene sequences in marine sediments suggest a possible occurrence of AOM coupled to nitrite reduction in marine systems. In this research, a marine denitrifying methanotrophic culture was obtained after 20 months of enrichment. Activity testing and quantitative PCR (qPCR) analysis were then conducted and showed that the methane oxidation activity and the number of NC10 bacteria increased correlatively during the enrichment period. 16S rRNA gene sequencing indicated that only bacteria in group A of the NC10 phylum were enriched and responsible for the resulting methane oxidation activity, although a diverse community of NC10 bacteria was harbored in the inoculum. Fluorescence in situ hybridization showed that NC10 bacteria were dominant in the enrichment culture after 20 months. The effect of salinity on the marine denitrifying methanotrophic culture was investigated, and the apparent optimal salinity was 20.5‰, which suggested that halophilic bacterial AOM coupled to nitrite reduction was obtained. Moreover, the apparent substrate affinity coefficients of the halophilic denitrifying methanotrophs were determined to be 9.8 ± 2.2 μM for methane and 8.7 ± 1.5 μM for nitrite. Copyright © 2015, American Society for Microbiology. All Rights Reserved.

  18. Studies on photosynthetic bacteria isolated from an estuarine beach of Goa

    Digital Repository Service at National Institute of Oceanography (India)

    Karanth, N.G.K.; Nair, S.; LokaBharathi, P.A.

    -sulphur purple bacteria). It had a characteristic absorption maximum at 850 nm which is a general feature of purple bacteria. The optimum pH for this strain was 7. Effect of different organic substances, nitrogenous compounds, and pollutants CO2 fixation...

  19. Sulfur cycle

    Digital Repository Service at National Institute of Oceanography (India)

    LokaBharathi, P.A.

    Microbes, especially bacteria, play an important role in oxidative and reductive cycle of sulfur. The oxidative part of the cycle is mediated by photosynthetic bacteria in the presence of light energy and chemosynthetic forms in the absence of light...

  20. Anaerobic expanded granular sludge bed (EGSB) reactor for the removal of sulphide by autotrophic denitrification

    Energy Technology Data Exchange (ETDEWEB)

    Dinamarca, Carlos [Department of Process, Energy and Environment, Faculty of Technology, Telemark University College Kjolnes ring 56, 3918 Porsgrunn (Norway)

    2013-07-01

    The Removal efficiency, load and N/S molar ratio, of an EGSB reactor for autotrophic sulphide denitrification operated for 96 days, were studied. The reactor was operated at high inlet sulphide concentrations between 0.25 to 3.00 g HS--S/L equivalents to loads between 5 to 250 g HS--S/m3-h. Sulphide removals higher than 99 % were achieved. At a N/S molar ratio of 0.3 and 12 hours HRT the process was stable even during transition periods of influent sulphide concentration and pH (9.0-12.1). At N/S molar ratio of 1.3, granules lost some of their sedimentation properties and appeared to disintegrate. On average 94 ± 4 % of the equivalent inlet sulphur ended as elemental sulphur.

  1. Assessing the effects of ultraviolet radiation on the photosynthetic potential in Archean marine environments

    Science.gov (United States)

    Avila-Alonso, Dailé; Baetens, Jan M.; Cardenas, Rolando; de Baets, Bernard

    2017-07-01

    In this work, the photosynthesis model presented by Avila et al. in 2013 is extended and more scenarios inhabited by ancient cyanobacteria are investigated to quantify the effects of ultraviolet (UV) radiation on their photosynthetic potential in marine environments of the Archean eon. We consider ferrous ions as blockers of UV during the Early Archean, while the absorption spectrum of chlorophyll a is used to quantify the fraction of photosynthetically active radiation absorbed by photosynthetic organisms. UV could have induced photoinhibition at the water surface, thereby strongly affecting the species with low light use efficiency. A higher photosynthetic potential in early marine environments was shown than in the Late Archean as a consequence of the attenuation of UVC and UVB by iron ions, which probably played an important role in the protection of ancient free-floating bacteria from high-intensity UV radiation. Photosynthetic organisms in Archean coastal and ocean environments were probably abundant in the first 5 and 25 m of the water column, respectively. However, species with a relatively high efficiency in the use of light could have inhabited ocean waters up to a depth of 200 m and show a Deep Chlorophyll Maximum near 60 m depth. We show that the electromagnetic radiation from the Sun, both UV and visible light, could have determined the vertical distribution of Archean marine photosynthetic organisms.

  2. The transformation from anammox granules to deammonification granules in micro-aerobic system by facilitating indigenous ammonia oxidizing bacteria.

    Science.gov (United States)

    Wang, Xiaolong; Gao, Dawen

    2018-02-01

    Granular deammonification process is a good way to retain aerobic and anaerobic ammonia oxidizing bacteria (AOB and anammox bacteria) and exhaust flocculent nitrite oxidizing bacteria (NOB). In this study, to facilitate indigenous AOB growth on anammox granules, by stepwise reducing influent nitrite, anammox granules were effectively transformed into deammonification granules in a micro-aerobic EGSB in 100 days. Total nitrogen removal efficiency of 90% and nitrogen removal rate of 2.3 g N/L/d were reached at stable deammonification stage. High influent FA and limited oxygen supply contributed suppression for Nitrospira-like NOB. In transition stages, Proteobacteria and Chloroflexi were always dominated. Anammox abundance decreased, while AOB abundance grew fast. Anammox bacteria and AOB were dominated by Brocadia fulgida and Nitrosomonas europaea, respectively. Denitrification activity and bacteria existed although without influent organic. The final AOB abundance was about 4.55-13.8 times more than anammox bacteria abundance, with almost equal potential activities. Copyright © 2017 Elsevier Ltd. All rights reserved.

  3. Atmospheric methane removal by methane-oxidizing bacteria immobilized on porous building materials

    NARCIS (Netherlands)

    Ganendra, G; De Muynck, W; Ho, A.; Hoefman, S.; De Vos, P.; Boeckx, P.; Boon, N.

    2014-01-01

    Biological treatment using methane-oxidizing bacteria (MOB) immobilized on six porous carrier materials have been used to mitigate methane emission. Experiments were performed with different MOB inoculated in building materials at high (similar to 20 % (v/v)) and low (similar to 100 ppmv) methane

  4. IDENTITY OF THE PINK-PIGMENTED METHANOL-OXIDIZING BACTERIA AS VIBRIO EXTORQUENS.

    Science.gov (United States)

    STOCKS, P K; MCCLESKEY, C S

    1964-10-01

    Stocks, Peter K. (Louisiana State University, Baton Rouge), and C. S. McCleskey. Identity of the pink-pigmented methanol-oxidizing bacteria as Vibrio extorquens. J. Bacteriol. 88:1065-1070. 1964.-Pink-pigmented bacteria isolated from enrichment cultures of methane oxidizers were found to possess similar morphological, cultural, and physiological characteristics. All the strains utilized methanol, formate, oxalate, succinate, glycerol, and benzene as sole carbon sources; methanol, formate, and glycerol afforded best growth. Most strains utilized fructose and ribose; other carbohydrates tested were not available as carbon and energy sources. There was strain variation in the use of hexane, heptane, n-propanol, n-butanol, acetate, and propionate. Methane, ethane, n-propane, and n-butane were not utilized. Our isolates, and Pseudomonas methanica of Harrington and Kallio (not the methane-dependent P. methanica of Dworkin and Foster), Pseudomonas AM1 of Peele and Quayle, Pseudomonas PRL-W4 of Kaneda and Roxburgh, and Protaminobacter ruber den Dooren de Jong are nearly identical with Vibrio extorquens (Bassalik) Bhat and Barker, and should be considered the same species.

  5. The environmental context of Acidithiobacillus ferrooxidans and its potential role as an ecosystem engineer in sulphidic mine waste

    Energy Technology Data Exchange (ETDEWEB)

    Ebenaa, Gustav

    2001-06-01

    Microorganisms are the causative agent of the environmental problems since they catalyse the weathering of the (sulphidic) waste. The chemical oxidation alone is not fast enough to create any severe environmental problems. Acidithiobacillus ferrooxidans is thought to be a key organism in weathering of sulphide minerals. A. ferrooxidans is affected by several more or less abiotic factors. The influence of temperature, pH and nutrient deficiency as potentially limiting factors for the activity of A. ferrooxidans has been investigated. It seems that temperature has less influence on its activity, but rather reflects the origin of the bacterial isolate. An alkaline pH seems enough to hinder growth and activity. The nutrients do not seem to be a limiting factor in the studied environment. The possible regulation of the activity of A. ferrooxidans is therefore a way to, at least partly, mitigate the environmental impact from mine waste. Waste from the mining industry is the largest waste problem in Sweden. With amounts over 600 million tonnes one could easily imagine the tremendous cost involved in the abatement. The MiMi-programme, with researchers from several relevant fields, has as its aim to evaluate present and to find alternative techniques to mitigate the environmental impact from mine waste. The understanding of A. ferrooxidans and its role as an ecosystem engineer is essential both in evaluating present techniques and even more so in finding alternative abatement techniques for sulphidic mine waste.

  6. Effects of two main metabolites of sulphate-reducing bacteria on the corrosion of Q235 steels in 3.5 wt.% NaCl media

    International Nuclear Information System (INIS)

    Bao, Qi; Zhang, Dun; Lv, Dandan; Wang, Peng

    2012-01-01

    Highlights: ► Extracellular polymeric substances have been isolated from a batch culture of sulphate-reducing bacteria successfully. ► Sulphide and extracellular polymeric substances have triggered distinct electrochemical characteristics. ► ATR-IR analysis has confirmed the Fe 2+ -complexing capability of extracellular polymeric substances. ► In situ AFM results show extracellular polymeric substances can form a densely packed film on Q235 steels. ► The adsorbed extracellular polymeric substances film has protected the Q235 steels to a certain degree. - Abstract: The electrochemical corrosion behaviour of Q235 steels in 3.5 wt.% NaCl solutions with sulphide and extracellular polymeric substances (EPS), the two main metabolites of sulphate-reducing bacteria, was separately investigated through potentiodynamic polarisation and electrochemical impedance spectroscopy. Either sulphide or EPS increased the anodic current density by nearly one order of magnitude and negatively shifted the corrosion potential. The effects of EPS at the initial stage of corrosion may be ascribed to the Fe 2+ -complexing capability and the quickly adsorbed film. Moreover, the feeble protective effect of EPS after 16 d of immersion was observed through scanning electron microscopy.

  7. Fungal-Transformation of Surrogate Sulphides and Carbonaceous ...

    African Journals Online (AJOL)

    In the recovery of gold from refractory gold ores, pretreatment is required to decompose sulphides and liberate occluded gold before cyanidation, and to deactivate carbonaceous matter and prevent it from adsorbing dissolved gold. Until the past three decades, most commercial pretreatment processes had been by abiotic ...

  8. Detection by denaturing gradient gel electrophoresis of ammonia-oxidizing bacteria in microcosms of crude oil-contaminated mangrove sediments.

    Science.gov (United States)

    dos Santos, A C F; Marques, E L S; Gross, E; Souza, S S; Dias, J C T; Brendel, M; Rezende, R P

    2012-01-27

    Currently, the effect of crude oil on ammonia-oxidizing bacterium communities from mangrove sediments is little understood. We studied the diversity of ammonia-oxidizing bacteria in mangrove microcosm experiments using mangrove sediments contaminated with 0.1, 0.5, 1, 2, and 5% crude oil as well as non-contaminated control and landfarm soil from near an oil refinery in Camamu Bay in Bahia, Brazil. The evolution of CO(2) production in all crude oil-contaminated microcosms showed potential for mineralization. Cluster analysis of denaturing gradient gel electrophoresis-derived samples generated with primers for gene amoA, which encodes the functional enzyme ammonia monooxygenase, showed differences in the sample contaminated with 5% compared to the other samples. Principal component analysis showed divergence of the non-contaminated samples from the 5% crude oil-contaminated sediment. A Venn diagram generated from the banding pattern of PCR-denaturing gradient gel electrophoresis was used to look for operational taxonomic units (OTUs) in common. Eight OTUs were found in non-contaminated sediments and in samples contaminated with 0.5, 1, or 2% crude oil. A Jaccard similarity index of 50% was found for samples contaminated with 0.1, 0.5, 1, and 2% crude oil. This is the first study that focuses on the impact of crude oil on the ammonia-oxidizing bacterium community in mangrove sediments from Camamu Bay.

  9. Bacteria dominate ammonia oxidation in soils used for outdoor cattle overwintering

    Czech Academy of Sciences Publication Activity Database

    Radl, V.; Chroňáková, Alica; Čuhel, Jiří; Šimek, Miloslav; Elhottová, Dana; Welzl, G.; Schloter, M.

    2014-01-01

    Roč. 77, May (2014), s. 68-71 ISSN 0929-1393 R&D Projects: GA MŠk LC06066 Grant - others:Akademie věd ČR(CZ) D-CZ 45:05/06 Institutional support: RVO:60077344 Keywords : ammonia oxidation * bacteria * archaea * amoA diversity * urea * pasture Subject RIV: EH - Ecology, Behaviour Impact factor: 2.644, year: 2014

  10. High potential oxidation-reduction titration of absorbance changes induced by pulsed laser and continuous light in chromatophores of photosynthesizing bacteria Rhodospirillum rubrum and Ectothiorhodospira shaposhnikovii

    International Nuclear Information System (INIS)

    Remennikov, S.M.; Chamorovsky, S.K.; Kononenko, A.A.; Venediktov, P.S.; Rubin, A.B.

    1975-01-01

    The photoreactions, activated both by pulsed laser and continuous light were studied in the membranes of isolated bacterial chromatophores poised at different oxidation-reduction potentials over a range of +200 mV to +500 mV. In Rhodospirillum rubrum a midpoint potential of oxidation-reduction curves for the laser-induced positive absorbance changes centred around 430 nm and carotenoid red shifts coincides with that for continuous light-induced absorbance changes, bleaching at 865 nm and blue shift at 800 nm, of the photosynthetic reaction centre bacteriochlorophyll. In Ectothiorhodospira shaposhnikovii the photosynthetic reaction centre bacteriochlorophyll, its photooxidation can be seen as light-induced absorbance changes, bleaching at 890 nm, blue shift at 800 nm and broad band appearance near 440 nm, has a midpoint oxidation-reduction potential of +390 mV at pH 7.4. The analysis of the oxidation-reduction titration curves for the high-potential c-type cytochrome absorbance changes induced both by pulsed laser and continuous light allowed to show that at least two haems of this cytochrome with a midpoint potential of +290 mV (pH 7.4), associated with each reaction centre bacteriochlorophyll, can donate electrons to the oxidized pigment directly

  11. Report on assessment of the mechanism of bacterially assisted oxidation of pyritic uranium tailings

    International Nuclear Information System (INIS)

    Halbert, B.B.; Scharer, J.M.; Knapp, R.A.

    1984-07-01

    The oxidation of pyritic minerals has been shown to be catalyzed by the presence of iron- and sulphur-oxidizing bacteria. Thiobacillus ferroxidans plays the most significant role in the formation and propagation of acidic conditions. Optimum growth conditions for the T. ferroxidans occurs at a temperature of 35 degrees C and pH of 2 to 3. Bacterially assisted oxidation of pyrite involves both direct and indirect contact mechanisms. The direct contact mechanism entails enzymatic oxidation of the insoluble sulphide moiety. The indirect mechanism involves bacterial oxidation of the dissolved ferrous component to the ferric state. The ferric iron, in turn, acts as the prime oxidant of pyrite and is reduced to ferrous iron. The re-oxidation of the dissolved ferrous component which is catalyzed by bacterial activity, completes the cyclic process. The rate of bacterial oxidation is affected by: the geochemistry and reactivity of the pyritic material; the amount of pyrite present in the waste material and the exposed surface area of the pyritic component; the availability of oxygen and carbon dioxide; the pH and temperature of the leach solution; and the presence (or absence) of organic inhibitors. Of the above factors, oxygen has been frequently identified as the rate limiting reactant in tailings

  12. Physiological ecology of heterotrophic bacteria in two Indiana lakes

    International Nuclear Information System (INIS)

    Lovell, C.R.

    1984-01-01

    Rates of bacterial production of particulate organic carbon in two hardwater Indiana lakes were studied. Primary production rates were calculated from rates of photosynthetic H 14 CO 3 - incorporation and bacterial (secondary) production from rates of 3 H-(methyl)-thymidine incorporation by natural samples. The relationship of thymidine incorporation to rates of bacterial growth in diluted natural samples was used to calculate the conversion factor 2.2 x 10 18 cells produced (mole thymidine incorporated) -1 . Bacteria in Little Crooked Lake were found to be growing at suboptimal temperatures throughout most of the water column, even during the summer months. Even rapidly growing metalimnetic populations displayed no noticable adaptation to low environmental temperatures. This indicates that temperature could have limited the growth of bacteria in this lake throughout the period of thermal stratification. The extracellular release of photosynthetically fixed organic carbon by healthy phytoplankton was not found to be an important carbon source for planktonic bacteria. Slow carbon release mechanisms, such as algal decomposition, seem to have been more important

  13. Neutrophilic Iron Oxidizing Bacteria: Occurrence and Relevance in Biological Drinking Water Treatment

    DEFF Research Database (Denmark)

    Gülay, Arda; Musovic, Sanin; Albrechtsen, Hans-Jørgen

    Rapid sand filtration (RSF) is an economical way to treat anoxic groundwater around the world. It consists of groundwater aeration followed by passage through a sand filter. The oxidation and removal of ferrous iron, which is commonly found in anoxic groundwaters, is often believed to be a fully......, neutrophilic iron oxidizers were present at the level of up to 7 105 cells per gram sediment. The spatial abundance and diversity of FeOB inferred by DGGE fingerprinting differed greatly both between and within individual sand filters. The results suggest a larger than assumed role of FeOB in iron removal...... physicochemical process. However, persistently low temperatures in RSF across Denmark may negatively affect the kinetics of chemical oxidation. The slower chemical oxidation of ferrous iron may increase the chances for iron bioconversion by neutrophilic iron-oxidizing bacteria (FeOB), which are found naturally...

  14. A spectrophotometric method for the determination of Hydrogen Sulphide sugar cane juice and water

    International Nuclear Information System (INIS)

    Mahadeviah, S.; Galil, Mansour S.; Kumar, M.S. Yogender; Suresha, M.S.; Nagendrappa, G.

    2006-01-01

    A sensitive spectrophotometric is developed for the determination of hydrogen sulphide in water and sugarcane juice. The method is based on the reaction of hydrogen sulphide with phospomolybdate (ammonium molybdate and phosphate) in sulphuric acid medium. The system obeys Lambert-Beer's law at 715 nm in the concentration range of 0.284-5.68 ug ml. Molar absorptivity, correlation coefficient and Sandell sensitivity values were found to be 5x10 l mol cm, 0.9995 and 0.0494 ug cm respectively. The method was employed for the determination of hydrogen sulphide in sugar cane juice and in water samples. The results obtained were reproducible with acceptable standard deviation 0.1140-0.1337 and relative standard deviation varies from 0.0797-0.6038%. For comparison, hydrogen sulphide present in sugarcane juice and water samples were also determined separately following the methylene blue official method. The results of the proposed method compare well with the official method. (author)

  15. Response of Lemna minor L. to short-term cobalt exposure: The effect on photosynthetic electron transport chain and induction of oxidative damage

    International Nuclear Information System (INIS)

    Begović, Lidija; Mlinarić, Selma; Antunović Dunić, Jasenka; Katanić, Zorana; Lončarić, Zdenko; Lepeduš, Hrvoje; Cesar, Vera

    2016-01-01

    Highlights: • Cobalt (Co"2"+) impaired the function of oxygen evolving complex (OEC) in L. minor L. • Electron transport through PSII components varied depending on Co"2"+ concentration. • K-band was proven to be suitable parameter for investigation of Co"2"+ toxicity. • Increased lipid peroxidation level showed early oxidative damage induced by Co"2"+. - Abstract: The effect of two concentrations of cobalt (Co"2"+) on photosynthetic activity and antioxidative response in Lemna minor L. were assessed 24, 48 and 72 h after the start of the exposure. Higher concentration of cobalt (1 mM) induced growth inhibition while lower concentration (0.01 mM) increased photosynthetic pigments content. Analysis of chlorophyll a fluorescence transients revealed high sensitivity of photosystem II primary photochemistry to excess of Co"2"+ especially at the higher concentration where decreased electron transport beyond primary quinone acceptor Q_A"− and impaired function of oxygen evolving complex (OEC) was observed. Due to impairment of OEC, oxygen production was decreased at higher Co"2"+ concentration. Activity of superoxide dismutase was mainly inhibited while lipid peroxidation increased, at both concentrations, indicating that cobalt-induced oxidative damage after short exposure and moreover, susceptibility of the membranes in the cell to cobalt toxicity. Results obtained in this study suggest possible application of used parameters as tools in assessment of early damage caused by metals.

  16. Effect of metal nanoparticles on energy spectra and optical properties of peripheral light-harvesting LH2 complexes from photosynthetic bacteria

    International Nuclear Information System (INIS)

    Goliney, I.Yu.; Sugakov, V.I.; Valkunas, L.; Vertsimakha, G.V.

    2012-01-01

    Highlights: ► Excitons of light-harvesting complexes (LH2) hybridize with plasmon modes. ► Light absorption of LH2 is enhanced by a metal nanoparticle. ► Using nanoshells allows reaching resonance between molecular and plasmons. ► Metal nanoparticles introduce additional channel of excitation decay. ► Light-harvesting may gain from the proper positioning of nanoshells. -- Abstract: The paper explores the theoretical possibility of affecting optical spectra and the quantum yield of the energy transfer in the peripheral light-harvesting complexes (LH2) from photosynthetic bacteria by placing a metal nanoparticle or a nanoshell nearby. An increased probability of the excitonic transition in the LH2 arises due to the borrowing of the oscillator strength from surface plasmons of the metal particle or the nanoshell. While both absorption and quenching of the excitations increase in the vicinity to a metal nanoparticle, having opposite effects, the total yield of the excitation transfer to reaction centers is shown to grow in the certain range of parameters.

  17. Effect of metal nanoparticles on energy spectra and optical properties of peripheral light-harvesting LH2 complexes from photosynthetic bacteria

    Energy Technology Data Exchange (ETDEWEB)

    Goliney, I.Yu., E-mail: igoliney@kinr.kiev.ua [Institute for Nuclear Research, National Academy of Science of Ukraine, 47 Nauki pr., 03680 Kyiv (Ukraine); Sugakov, V.I. [Institute for Nuclear Research, National Academy of Science of Ukraine, 47 Nauki pr., 03680 Kyiv (Ukraine); Valkunas, L. [Center for Physical Sciences and Technology, Savanoriu Ave. 231, 02300 Vilnius (Lithuania); Department of Theoretical Physics, Vilnius University, Sauletekio 9, Build. 3, 10222 Vilnius (Lithuania); Vertsimakha, G.V. [Institute for Nuclear Research, National Academy of Science of Ukraine, 47 Nauki pr., 03680 Kyiv (Ukraine)

    2012-08-24

    Highlights: Black-Right-Pointing-Pointer Excitons of light-harvesting complexes (LH2) hybridize with plasmon modes. Black-Right-Pointing-Pointer Light absorption of LH2 is enhanced by a metal nanoparticle. Black-Right-Pointing-Pointer Using nanoshells allows reaching resonance between molecular and plasmons. Black-Right-Pointing-Pointer Metal nanoparticles introduce additional channel of excitation decay. Black-Right-Pointing-Pointer Light-harvesting may gain from the proper positioning of nanoshells. -- Abstract: The paper explores the theoretical possibility of affecting optical spectra and the quantum yield of the energy transfer in the peripheral light-harvesting complexes (LH2) from photosynthetic bacteria by placing a metal nanoparticle or a nanoshell nearby. An increased probability of the excitonic transition in the LH2 arises due to the borrowing of the oscillator strength from surface plasmons of the metal particle or the nanoshell. While both absorption and quenching of the excitations increase in the vicinity to a metal nanoparticle, having opposite effects, the total yield of the excitation transfer to reaction centers is shown to grow in the certain range of parameters.

  18. Combined effects of graphene oxide and Cd on the photosynthetic capacity and survival of Microcystis aeruginosa

    Energy Technology Data Exchange (ETDEWEB)

    Tang, Yulin, E-mail: tangyulin@tongji.edu.cn; Tian, Jinglin; Li, Shuyan; Xue, Chonghua; Xue, Zhehua; Yin, Daqiang; Yu, Shuili

    2015-11-01

    In this work, the combined effects of graphene oxide (GO) and Cd{sup 2+} solution on Microcystis aeruginosa were investigated. Chlorophyll fluorescence parameters were measured by a pulse-amplitude modulated fluorometer. GO at low concentrations exhibited no significant toxicity. The presence of GO at low concentrations significantly enhanced Cd{sup 2+} toxicity as the 96 h half maximal effective concentration of the Cd{sup 2+} reduced from 0.51 ± 0.01 to 0.474 ± 0.01 mg/L. However, concentrations of GO above 5 mg/L did not significantly increase the toxicity of the Cd{sup 2+}/GO system. Observations through scanning and transmission electron microscopy revealed that GO, with Cd{sup 2+}, easily attached to and entered into the algae. Reactive oxygen species and malondialdehyde were measured to explain the toxicity mechanism. The photosynthetic parameters were useful in measuring the combined toxicity of the nanoparticles and heavy metals. - Highlights: • Combined effects of graphene oxide and Cd{sup 2+} to M. aeruginosa were investigated. • Chlorophyll fluorescence parameters were obtained by PAM. • OS and MDA were measured to evaluate algae toxicity. • GO at low concentration enhanced Cd{sup 2+} toxicity.

  19. New oxidation and photo-oxidation products of tryptophan

    International Nuclear Information System (INIS)

    Savige, W.E.

    1975-01-01

    Dye-sensitized photo-oxidation of tryptophan in water gives N'-formylkynurenine and (+-)-3a-hydroxy-1,2,3a,8,8a-hexahydropyrrolo[2,3-b] indole-2-carboxylic acid. The latter rearranges to oxindolyl-3-alanine on irradiation with UV light and reacts with thiols, including cysteine, in warm 20% acetic acid to give the corresponding 2-tryptophyl sulphides. (orig.) [de

  20. In vitro suppression of fungi caused by combinations of apparently non-antagonistic soil bacteria

    NARCIS (Netherlands)

    De Boer, W.; Wagenaar, A.M.; Klein Gunnewiek, P.J.A.; Van Veen, J.A.

    2007-01-01

    We hypothesized that apparently non-antagonistic soil bacteria may contribute to suppression of fungi during competitive interactions with other bacteria. Four soil bacteria (Brevundimonas sp., Luteibacter sp., Pedobacter sp. and Pseudomonas sp.) that exhibited little or no visible antifungal

  1. The Reclamation of Industrial Wastes Inclusive Sulphates by Sulphate-Reducing Bacteria

    Directory of Open Access Journals (Sweden)

    Mária Kušnierová

    2004-12-01

    Full Text Available The objective of our study was to verify experimentally the possibility of using coal mine drainage and gypsum from the „stabilizate“ (the final product from the combustion desulphurisation as the source of sulphate for the cultivation of SRB with the prospect of: purging of mine waste waters inclusive sulphates, recycling of desulphurisation agent (limestone and production of elemental sulphur from hydrogen sulphide. The results confirmed the theoretical assumptions on the use of gypsum, which forms the substantial component of „stabilizate“, as the source of sulphate for sulphate-reducing bacteria, which produce hydrogen sulphide in the process of bacterial reduction of sulphates. They also showed the possibility of recycling the desulphurisation agent – limestone, as well as the realistic alternative of using „stabilizate“ in the production of elemental sulphur which still represents an important raw material needed in chemical, paper or other industries.

  2. On the photosynthetic and devlopmental responses of leaves to the spectral composition of light

    NARCIS (Netherlands)

    Hogewoning, S.W.

    2010-01-01

    Key words: action spectrum, artificial solar spectrum, blue light, Cucumis sativus, gas-exchange, light-emitting diodes (LEDs), light interception, light quality, non-photosynthetic pigments, photo-synthetic capacity, photomorphogenesis, photosystem excitation balance, quantum yield, red light.

  3. Cleaner processing: a sulphide-free approach for depilation of skins.

    Science.gov (United States)

    Ranjithkumar, Ammasi; Durga, Jayanthi; Ramesh, Ramakrishnan; Rose, Chellan; Muralidharan, Chellappa

    2017-01-01

    The conventional unhairing process in leather making utilises large amount of lime and sodium sulphide which is hazardous and poses serious waste disposal concerns. Under acidic conditions, sodium sulphide liberates significant quantities of hydrogen sulphide which causes frequent fatal accidents. Further, the conventional unhairing process involves destruction of the hair leading to increased levels of biological oxygen demand (BOD), chemical oxygen demand (COD), total dissolved solids (TDS) and total suspended solids (TSS) in the effluent. A safe approach is needed to overcome such environmental and health problems through an eco-benign process. The present study deals with a clean technology in which the keratinous body is detached from the dermis using enzymes produced from Bacillus crolab MTCC 5468 by solid state fermentation (SSF) as an alternative to noxious chemicals. Complete unhairing of skin could be achieved with an enzyme concentration of 1.2 % (w/w). The bio-chemical parameters of the spent liquor of the enzymatic process were environmentally favourable when compared with conventional method. The study indicates that the enzymatic unhairing is a safe process which could be used effectively in leather processing to alleviate pollution and health problems.

  4. Laboratory testing results of kinetics and processing technology of the polymetallic sulphide concentrate Blagojev Kamen – Serbia

    Directory of Open Access Journals (Sweden)

    Milorad Ćirković

    2016-06-01

    Full Text Available This work presents the laboratory testing results of kinetics the oxidation process and sample processing of the sulphide polymetallic concentrate Blagojev Kamen. The aim of investigation is recovery of these types of raw material, present in large quantities in the peripheral parts of already used primary mineral deposits of copper, because of their high economic potential due to the content of a large number of metals and especially precious metals. Characterization of this raw material is based on the chemical analyses, XRD results, DTA analysis, etc. For these investigations, the sulphide concentrate with the following content was used in %: Cu – 2.3; Fe – 19.8; S – 27.19; Zn – 9.13; As – 0.167; Pb – 15.63; SiO2 – 17.93; CaO – 0.97; Al2O3 – 1.43; Ag – 480 g/t; Au – 659 g/t. Kinetic investigations of oxidation processes were carried out under the isothermal conditions within the temperature range of 400 to 625 oC. The Sharp's model was used for determination the kinetics parameters, and determined values of activation energy are 67 kJ/mole for the first period, and 47 kJ/mole for the second period. Pyrometallurgical treatment of this type of polymetallic concentrate, in the laboratory conditions, was carried out using the oxidative roasting and, then the reduction smelting was done in the Taman's furnace. Gold from 90.5 to 97.95% and silver from 77.28 to 93.37% are moved into the raw lead (smelting product. Gold from 1.1 to 3.92% and silver from 4.35 to 8.42% are moved into the polymetallic copper matte. Gold from 0.58 to 1.6% and silver from 2.45 to 6.82% are moved into the slag.

  5. Nitrous Oxide Metabolism in Nitrate-Reducing Bacteria: Physiology and Regulatory Mechanisms.

    Science.gov (United States)

    Torres, M J; Simon, J; Rowley, G; Bedmar, E J; Richardson, D J; Gates, A J; Delgado, M J

    2016-01-01

    Nitrous oxide (N2O) is an important greenhouse gas (GHG) with substantial global warming potential and also contributes to ozone depletion through photochemical nitric oxide (NO) production in the stratosphere. The negative effects of N2O on climate and stratospheric ozone make N2O mitigation an international challenge. More than 60% of global N2O emissions are emitted from agricultural soils mainly due to the application of synthetic nitrogen-containing fertilizers. Thus, mitigation strategies must be developed which increase (or at least do not negatively impact) on agricultural efficiency whilst decrease the levels of N2O released. This aim is particularly important in the context of the ever expanding population and subsequent increased burden on the food chain. More than two-thirds of N2O emissions from soils can be attributed to bacterial and fungal denitrification and nitrification processes. In ammonia-oxidizing bacteria, N2O is formed through the oxidation of hydroxylamine to nitrite. In denitrifiers, nitrate is reduced to N2 via nitrite, NO and N2O production. In addition to denitrification, respiratory nitrate ammonification (also termed dissimilatory nitrate reduction to ammonium) is another important nitrate-reducing mechanism in soil, responsible for the loss of nitrate and production of N2O from reduction of NO that is formed as a by-product of the reduction process. This review will synthesize our current understanding of the environmental, regulatory and biochemical control of N2O emissions by nitrate-reducing bacteria and point to new solutions for agricultural GHG mitigation. © 2016 Elsevier Ltd. All rights reserved.

  6. Nitrous oxide emission by the non-denitrifying, nitrate ammonifier Bacillus licheniformis.

    Science.gov (United States)

    Sun, Yihua; De Vos, Paul; Heylen, Kim

    2016-01-19

    Firmicutes have the capacity to remove excess nitrate from the environment via either denitrification, dissimilatory nitrate reduction to ammonium or both. The recent renewed interest in their nitrogen metabolism has revealed many interesting features, the most striking being their wide variety of dissimilatory nitrate reduction pathways. In the present study, nitrous oxide production from Bacillus licheniformis, a ubiquitous Gram-positive, spore-forming species with many industrial applications, is investigated. B. licheniformis has long been considered a denitrifier but physiological experiments on three different strains demonstrated that nitrous oxide is not produced from nitrate in stoichiometric amounts, rather ammonium is the most important end-product, produced during fermentation. Significant strain dependency in end-product ratios, attributed to nitrite and ammonium, and medium dependency in nitrous oxide production were also observed. Genome analyses confirmed the lack of a nitrite reductase to nitric oxide, the key enzyme of denitrification. Based on the gene inventory and building on knowledge from other non-denitrifying nitrous oxide emitters, hypothetical pathways for nitrous oxide production, involving NarG, NirB, qNor and Hmp, are proposed. In addition, all publically available genomes of B. licheniformis demonstrated similar gene inventories, with specific duplications of the nar operon, narK and hmp genes as well as NarG phylogeny supporting the evolutionary separation of previously described distinct BALI1 and BALI2 lineages. Using physiological and genomic data we have demonstrated that the common soil bacterium B. licheniformis does not denitrify but is capable of fermentative dissimilatory nitrate/nitrite reduction to ammonium (DNRA) with concomitant production of N2O. Considering its ubiquitous nature and non-fastidious growth in the lab, B. licheniformis is a suitable candidate for further exploration of the actual mechanism of N2O

  7. BIOREMEDIATION FOR ACID MINE DRAINAGE: ORGANIC SOLID WASTE AS CARBON SOURCES FOR SULFATE-REDUCING BACTERIA: A REVIEW

    Directory of Open Access Journals (Sweden)

    I. N. Jamil

    2013-12-01

    Full Text Available Biological sulfate reduction has been slowly replacing chemical unit processes to treat acid mine drainage (AMD. Bioremediations for AMD treatment are favored due to their low capital and maintenance cost. This paper describes the available AMD treatment, current SRB commercialization such as THIOPAQ® and BioSulphide® technologies, and also the factors and limitations faced. THIOPAQ® and BioSulphide® technologies use expensive carbon sources such as hydrogen as the electron donor. This paper discusses the possibility of organic solid waste as an alternative substrate as it is cheaper and abundant. A possible AMD treatment system setup was also proposed to test the efficiency of sulfate-reducing bacteria utilizing organic solid substrate.

  8. Phototrophic Fe(II-oxidation in the chemocline of a ferruginous meromictic lake

    Directory of Open Access Journals (Sweden)

    Xavier Alexis eWalter

    2014-12-01

    Full Text Available Precambrian Banded Iron Formation (BIF deposition was conventionally attributed to the precipitation of iron-oxides resulting from the abiotic reaction of ferrous iron (Fe(II with photosynthetically-produced oxygen. Earliest traces of oxygen date from 2.7 Ga, thus raising questions as to what may have caused BIF precipitation before oxygenic photosynthesis evolved. The discovery of anoxygenic phototrophic bacteria thriving through the oxidation of Fe(II has provided support for a biological origin for some BIFs, but despite reports suggesting that anoxygenic phototrophs may oxidize Fe(II in the environment, a model ecosystem of an ancient ocean where they are demonstrably active was lacking. Here we show that anoxygenic phototrophic bacteria contribute to Fe(II oxidation in the water column of the ferruginous sulfate-poor, meromictic lake La Cruz (Spain. We observed in-situ photoferrotrophic activity through stimulation of phototrophic carbon uptake in the presence of Fe(II, and determined light-dependent Fe(II-oxidation by the natural chemocline microbiota. Moreover, a photoferrotrophic bacterium most closely related to Chlorobium ferrooxidans was enriched from the ferruginous water column. Our study for the first time demonstrates a direct link between anoxygenic photoferrotrophy and the anoxic precipitation of Fe(III-oxides in a ferruginous water column, providing a plausible mechanism for the bacterial origin of BIF’s before the advent of free oxygen.

  9. The effect of surface condition and cold work on the sulphidation resistance of 153MA at 700 C

    Energy Technology Data Exchange (ETDEWEB)

    Szakalos, P.; Hertzman, S.; Pettersson, R.F.A. [Swedish Inst. for Metals Research, Stockholm (Sweden); Ivarsson, B. [Avesta Sheffield AB, Avesta (Sweden)

    2000-05-01

    The normal grain sized 153MA-sample experienced an almost linear weight gain curve in the sulphidizing environment while modified materials, with a finer grain size or cold worked structure, displayed more parabolic behaviour and lower weight gains. These effects may be related to more effective Cr-diffusion in the modified samples with a higher Cr-grain boundary diffusion in the fine grain-sample and a higher Cr-bulk diffusion rate in the cold worked sample. The sand blasted sample performed exceedingly well with a thin protective oxide layer compared to the etched and ground samples which both suffered significant weight loss and spalling. The deformed surface structure on the sand blasted sample enhances the Cr-bulk diffusion thus promoting a protective Cr-rich oxide formation. (orig.)

  10. Pyrometallurgical processing for raw materials of heavy non-ferrous metals and furnace for carrying it out. Pyrometallurgisches Verarbeitungsverfahren fuer Rohstoffe schwerer Buntmetalle und Ofen zu dessen Realisierung

    Energy Technology Data Exchange (ETDEWEB)

    Vanjukov, A V; Metschev, V V; Bystrov, V P; Eschov, E I; Vasiliev, M G; Zaitsev, V Y; Romenets, V A; Ivanov, V V; Golik, S Y; Grin-Gnatovsky, E S

    1980-06-04

    Pyrometallurgical processing is described, by which non-ferrous metals are obtained from a melt. The pneumatic mixing of melt material and the oxidation of sulphide and oxide starting material is done by blowing a flow of gas with more than 35% oxygen content into it. The layers of slag, ore and raw metal formed in the furnace can be separated. The construction of the furnace is described in detail. 4 examples complete the description.

  11. Effect of non-Legionellaceae bacteria on the multiplication of Legionella pneumophila in potable water.

    Science.gov (United States)

    Wadowsky, R M; Yee, R B

    1985-05-01

    A naturally occurring suspension of Legionella pneumophila and associated microbiota contained three unidentified non-Legionellaceae bacteria which supported satellite growth of a subculture of L. pneumophila on an L-cysteine-deficient medium and another bacterium which did not support growth of the subculture. Washed suspensions containing 10(3), 10(5), 10(7), or 10(8) CFU of a mixture of isolates of these non-Legionellaceae bacteria failed to support the multiplication of an isolate of agar-grown L. pneumophila which had been washed and seeded into the suspensions. The suspensions which contained 10(3), 10(5), or 10(7) CFU of the non-Legionellaceae bacteria per ml appeared to enhance survival or cryptic growth of agar-grown L. pneumophila. A decline of 1.3 log CFU of L. pneumophila per ml occurred within the first week of incubation in the sample which contained 10(8) CFU of the non-Legionellaceae bacteria per ml. In contrast to these results, naturally occurring L. pneumophila multiplied in the presence of associated microbiota. The necessity to subculture L. pneumophila and the non-Legionellaceae bacteria on artificial medium to obtain pure cultures may have affected the multiplication of L. pneumophila in tap water. Alternatively, other microorganisms may be present in the naturally occurring suspension which support the growth of this bacterium.

  12. Rice Photosynthetic Productivity and PSII Photochemistry under Nonflooded Irrigation

    Directory of Open Access Journals (Sweden)

    Haibing He

    2014-01-01

    Full Text Available Nonflooded irrigation is an important water-saving rice cultivation technology, but little is known on its photosynthetic mechanism. The aims of this work were to investigate photosynthetic characteristics of rice during grain filling stage under three nonflooded irrigation treatments: furrow irrigation with plastic mulching (FIM, furrow irrigation with nonmulching (FIN, and drip irrigation with plastic mulching (DI. Compared with the conventional flooding (CF treatment, those grown in the nonflooded irrigation treatments showed lower net photosynthetic rate (PN, lower maximum quantum yield (Fv/Fm, and lower effective quantum yield of PSII photochemistry (ΦPSII. And the poor photosynthetic characteristics in the nonflooded irrigation treatments were mainly attributed to the low total nitrogen content (TNC. Under non-flooded irrigation, the PN, Fv/Fm, and ΦPSII significantly decreased with a reduction in the soil water potential, but these parameters were rapidly recovered in the DI and FIM treatments when supplementary irrigation was applied. Moreover, The DI treatment always had higher photosynthetic productivity than the FIM and FIN treatments. Grain yield, matter translocation, and dry matter post-anthesis (DMPA were the highest in the CF treatment, followed by the DI, FIM, and FIN treatments in turn. In conclusion, increasing nitrogen content in leaf of rice plants could be a key factor to improve photosynthetic capacity in nonflooded irrigation.

  13. Mechanisms of Persistence of the Ammonia-Oxidizing Bacteria Nitrosomonas to the Biocide Free Nitrous Acid.

    Science.gov (United States)

    Laloo, Andrew E; Wei, Justin; Wang, Dongbo; Narayanasamy, Shaman; Vanwonterghem, Inka; Waite, David; Steen, Jason; Kaysen, Anne; Heintz-Buschart, Anna; Wang, Qilin; Schulz, Benjamin; Nouwens, Amanda; Wilmes, Paul; Hugenholtz, Philip; Yuan, Zhiguo; Bond, Philip L

    2018-05-01

    Free nitrous acid (FNA) exerts a broad range of antimicrobial effects on bacteria, although susceptibility varies considerably among microorganisms. Among nitrifiers found in activated sludge of wastewater treatment processes (WWTPs), nitrite-oxidizing bacteria (NOB) are more susceptible to FNA compared to ammonia-oxidizing bacteria (AOB). This selective inhibition of NOB over AOB in WWTPs bypasses nitrate production and improves the efficiency and costs of the nitrogen removal process in both the activated sludge and anaerobic ammonium oxidation (Anammox) system. However, the molecular mechanisms governing this atypical tolerance of AOB to FNA have yet to be understood. Herein we investigate the varying effects of the antimicrobial FNA on activated sludge containing AOB and NOB using an integrated metagenomics and label-free quantitative sequential windowed acquisition of all theoretical fragment ion mass spectra (SWATH-MS) metaproteomic approach. The Nitrosomonas genus of AOB, on exposure to FNA, maintains internal homeostasis by upregulating a number of known oxidative stress enzymes, such as pteridine reductase and dihydrolipoyl dehydrogenase. Denitrifying enzymes were upregulated on exposure to FNA, suggesting the detoxification of nitrite to nitric oxide. Interestingly, proteins involved in stress response mechanisms, such as DNA and protein repair enzymes, phage prevention proteins, and iron transport proteins, were upregulated on exposure to FNA. In addition enzymes involved in energy generation were also upregulated on exposure to FNA. The total proteins specifically derived from the NOB genus Nitrobacter was low and, as such, did not allow for the elucidation of the response mechanism to FNA exposure. These findings give us an understanding of the adaptive mechanisms of tolerance within the AOB Nitrosomonas to the biocidal agent FNA.

  14. Sulphur isotope variations in the mantle from ion microprobe analyses of micro-sulphide inclusions

    International Nuclear Information System (INIS)

    Chaussidon, M.; Albarede, F.; Sheppard, S.M.F.

    1989-01-01

    21 samples of sulphide trapped either as liquid globules or grains in various minerals (olivine, pyroxenes, ilmenite and garnet) or rocks (basalt glasses, peridotites, eclogites and kimberlites) of mantle origin, have been analysed for their sulphur isotope, and their Cu, Ni, Fe compositions by ion microprobe. The results show a wide range of δ 34 S values between -4.9±1 and +8±1per mille. Sulphides with high nickel contents (up to 40% pentlandite), corresponding mostly to residual peridotites, have δ 34 S values ranging from -3.2per mille to +3.6per mille with a mode of +3±1per mille, compared to low Ni content sulphides, mostly contained in pyroxenites, OIB and kimberlites, ranging from -3.6per mille to +8per mille with a mode of +1±1per mille. The δ 34 S of sulphides originating from within the mantle are variable. The sulphide globules with high Ni contents and δ 34 S values close to +3per mille, are probably produced by 10-20% partial melting of a mantle source containing 300 ppm sulphur as an upper limit and having a δ 34 S value of +0.5±0.5per mille. This difference in δ 34 S values suggests a high-temperature S-isotope fractionation of ≅+3per mille between liquid sulphide and the sulphur dissolved in the silicate liquid. The sulphur isotopes balance in the system upper mantle + oceanic crust + continental crust + seawater requires a mean δ 34 S value of the primitive upper mantle of +0.5per mille, slightly but significantly different from that of chondrites (+0.2±0.2per mille). (orig.)

  15. Diffusive Transport of Sulphide through an Engineering Barrier System in a Deep Geological Repository

    Science.gov (United States)

    Briggs, S. A.; Sleep, B. E.; McKelvie, J. R. M.; Krol, M.

    2015-12-01

    Bentonite is a naturally occurring clay-rich sediment containing montmorillonite, a smectitic clay mineral that has a high cation exchange capacity and swells upon contact with water. Owing to these characteristics, highly compacted bentonite (HCB) is an often included component of engineered barrier systems (EBS) designed to protect used fuel containers (UFCs) in deep geological repositories (DGR) for high-level nuclear waste. The low water activity and high swelling pressure of HCB suppresses microbial activity and the related production of sulphide that could cause microbiologically influenced corrosion (MIC) of UFCs The Canadian Nuclear Waste Management Organization (NWMO) has chosen a UFC that consists of an inner steel core and outer copper coating which is resistant to corrosion. However, under anaerobic conditions, MIC can still contribute to UFC corrosion if sulphides are present in the groundwater. Therefore the EBS consisting of bentonite blocks and pellets has been designed to impede the movement of sulphides to the UFC. In order to examine the effectiveness of the EBS, a 3D numerical model was developed capable of simulating the diffusive transport of sulphide within the NWMO EBS. The model was developed using COMSOL Multiphysics, a finite element software package and is parametric which allows the impact of different repository layouts to be assessed. The developed model was of the entire NWMO placement room, as well as, a stand-alone UFC and included conservative assumptions such as a fully saturated system and a constant concentration boundary condition. The results showed that the highest sulphide flux occurred at the semi-spherical end caps of the UFC. Further studies examined the effect of sulphide hotspots and fractures, representing possible EBS failure mechanisms. The model results highlight that even with conservative assumptions the chosen EBS will effectively protect the UFC from microbiologically influenced corrosion.

  16. Revisiting the systemic lipopolysaccharide mediated neuroinflammation: Appraising the effect of l-cysteine mediated hydrogen sulphide on it

    Directory of Open Access Journals (Sweden)

    Abdulaziz S. Al-Saeedan

    2018-05-01

    Full Text Available The present research was ventured to examine the effect of l-cysteine on neuro-inflammation persuaded by peripheral lipopolysaccharides (LPS, 125 μg/kg, i.p. administration. No behavioral, biochemical, and inflammatory abnormality was perceived in the brain tissues of experimental animals after LPS administration. l-cysteine precipitated marginal symptoms of toxicity in the brain tissue. Similar pattern of wholesome effect of LPS were perceived when evaluated through the brain tissue fatty acid profile, histopathologically and NF-ĸBP65 protein expression. LPS was unsuccessful to alter the levels of hydrogen sulphide (H2S, cyclooxygenase (COX and lipoxygenase (LOX enzyme in brain tissue. LPS afforded significant peripheral toxicity, when figured out through inflammatory markers (COX, LOX, gaseous signaling molecules nitric oxide (NO, H2S, liver toxicity (SGOT, SGPT, and inflammatory transcription factor (NF-ĸBP65 and l-cysteine also provided a momentous protection against the same as well. The study inculcated two major finding, firstly LPS (i.p. cannot impart inflammatory changes to brain and secondly, l-cysteine can afford peripheral protection against deleterious effect of LPS (i.p. Keywords: Hydrogen sulphide, l-cysteine, Inflammation, Lipopolysaccharide, Neuroinflammation

  17. Diversity and abundance of photosynthetic sponges in temperate Western Australia

    Directory of Open Access Journals (Sweden)

    Brümmer Franz

    2009-02-01

    Full Text Available Abstract Background Photosynthetic sponges are important components of reef ecosystems around the world, but are poorly understood. It is often assumed that temperate regions have low diversity and abundance of photosynthetic sponges, but to date no studies have investigated this question. The aim of this study was to compare the percentages of photosynthetic sponges in temperate Western Australia (WA with previously published data on tropical regions, and to determine the abundance and diversity of these associations in a range of temperate environments. Results We sampled sponges on 5 m belt transects to determine the percentage of photosynthetic sponges and identified at least one representative of each group of symbionts using 16S rDNA sequencing together with microscopy techniques. Our results demonstrate that photosynthetic sponges are abundant in temperate WA, with an average of 63% of sponge individuals hosting high levels of photosynthetic symbionts and 11% with low to medium levels. These percentages of photosynthetic sponges are comparable to those found on tropical reefs and may have important implications for ecosystem function on temperate reefs in other areas of the world. A diverse range of symbionts sometimes occurred within a small geographic area, including the three "big" cyanobacterial clades, Oscillatoria spongeliae, "Candidatus Synechococcus spongiarum" and Synechocystis species, and it appears that these clades all occur in a wide range of sponges. Additionally, spongin-permeating red algae occurred in at least 7 sponge species. This study provides the first investigation of the molecular phylogeny of rhodophyte symbionts in sponges. Conclusion Photosynthetic sponges are abundant and diverse in temperate WA, with comparable percentages of photosynthetic to non-photosynthetic sponges to tropical zones. It appears that there are three common generalist clades of cyanobacterial symbionts of sponges which occur in a wide

  18. Some studies on successive ionic layer adsorption and reaction (SILAR) grown indium sulphide thin films

    International Nuclear Information System (INIS)

    Pathan, H.M.; Lokhande, C.D.; Kulkarni, S.S.; Amalnerkar, D.P.; Seth, T.; Han, Sung-Hwan

    2005-01-01

    Indium sulphide (In 2 S 3 ) thin films were grown on amorphous glass substrate by the successive ionic layer adsorption and reaction (SILAR) method. X-ray diffraction, optical absorption, scanning electron microscopy (SEM) and Rutherford back scattering (RBS) were applied to study the structural, optical, surface morphological and compositional properties of the indium sulphide thin films. Utilization of triethanolamine and hydrazine hydrate complexed indium sulphate and sodium sulphide as precursors resulted in nanocrystalline In 2 S 3 thin film. The optical band gap was found to be 2.7 eV. The film appeared to be smooth and homogeneous from SEM study

  19. Ammonia-oxidizing Bacteria and Archaea in the Rhizosphere of Freshwater Macrophytes

    DEFF Research Database (Denmark)

    Herrmann, Martina; Schramm, Andreas

    2007-01-01

    AMMONIA-OXIDIZING ARCHAEA AND BACTERIA IN THE RHIZOSPHERE OF FRESHWATER MACROPHYTES Martina Herrmann and Andreas Schramm Department of Biological Sciences, Microbiology, University of Aarhus, Denmark Aquatic macrophytes such as Littorella uniflora and Lobelia dortmanna release oxygen from...... their roots and thereby stimulate nitrification and coupled nitrification-denitrification in their rhizosphere. However, oxygen release and inorganic nitrogen concentrations differ markedly between macrophyte species. We therefore propose (i) that the rhizosphere of freshwater macrophytes harbours a species......-specific microbial community distinct from that of unvegetated sediment and (ii) that aquatic macrophytes have an impact on abundance and activity of nitrifying and denitrifying bacteria in freshwater sediment. The goal of this study was to test these hypotheses for the key functional group for coupled nitrification...

  20. The Application of Sulphate-Reducing Bacteria for the Heavy Metals Elimination from Acid Mine Drainage

    Directory of Open Access Journals (Sweden)

    Alena Luptáková

    2004-12-01

    Full Text Available One of the most important problems affecting mining companies around the world is the treatment of acid mine drainage (AMD. AMD is characterised by its high acidity, high concentration of metals (Cu, Zn, Cd,… and high concentration of dissolved sulphates. The techniques traditionally used for the treatment of AMD have been based on chemical methods of neutralization and precipitation. A possible alternative to the chemical treatment of AMD is bioremediation using anaerobic sulphate-reducing bacteria (SRB. The treatment of AMD by SRB is based on the ability of SRB to reduce sulphates to hydrogen sulphide, which binds readily with metals to form sparingly soluble precipitates. In this study we have attempted to investigate the feasibility of anaerobic biotreatment of the copper contaminated model solution and a real effluent AMD from the shaft Pech (the locality Smolnik using SRB. This method involves three stages: The H2S production by sulphate-reducing bacteria, the metals precipitation by the biologically produced H2S and the metal sulphides filtration. The studies confirm that copper was effectively recovered from the solution using bacterial produced H2S. An initial copper concentration 10 mg.l-1 was decreased to less than 0.05 mg.l-1 after 3 hours. The most adequate pH value for cooper precipitation was 2.5. Results of the copper precipitation from the areal effluent indicates that the optimal pH value for the copper precipitation is 3.5, but the created precipitates contain a mixture of copper and iron sulphides.

  1. Enrichment of Thermophilic Propionate-Oxidizing Bacteria in Syntrophy with Methanobacterium thermoautotrophicum or Methanobacterium thermoformicicum

    OpenAIRE

    Stams, Alfons J. M.; Grolle, Katja C. F.; Frijters, Carla T. M.; Van Lier, Jules B.

    1992-01-01

    Thermophilic propionate-oxidizing, proton-reducing bacteria were enriched from the granular methanogenic sludge of a bench-scale upflow anaerobic sludge bed reactor operated at 55°C with a mixture of volatile fatty acids as feed. Thermophilic hydrogenotrophic methanogens had a high decay rate. Therefore, stable, thermophilic propionate-oxidizing cultures could not be obtained by using the usual enrichment procedures. Stable and reproducible cultivation was possible by enrichment in hydrogen-p...

  2. Nicotinoprotein methanol dehydrogenase enzymes in Gram-positive methylotrophic bacteria

    NARCIS (Netherlands)

    Hektor, Harm J.; Kloosterman, Harm; Dijkhuizen, Lubbert

    2000-01-01

    A novel type of alcohol dehydrogenase enzyme has been characterized from Gram-positive methylotrophic (Bacillus methanolicus, the actinomycetes Amycolatopsis methanolica and Mycobacterium gastri) and non-methylotrophic bacteria (Rhodococcus strains). Its in vivo role is in oxidation of methanol and

  3. Non-cooperative immobilization of residual water bound in lyophilized photosynthetic lamellae.

    Science.gov (United States)

    Harańczyk, Hubert; Baran, Ewelina; Nowak, Piotr; Florek-Wojciechowska, Małgorzata; Leja, Anna; Zalitacz, Dorota; Strzałka, Kazimierz

    2015-12-01

    This study applied 1H-NMR in time and in frequency domain measurements to monitor the changes that occur in bound water dynamics at decreased temperature and with increased hydration level in lyophilizates of native wheat photosynthetic lamellae and in photosynthetic lamellae reconstituted from lyophilizate. Proton relaxometry (measured as free induction decay = FID) distinguishes a Gaussian component S within the NMR signal (o). This comes from protons of the solid matrix of the lamellae and consists of (i) an exponentially decaying contribution L1 from mobile membrane protons, presumably from lipids, and from water that is tightly bound to the membrane surface and thus restricted in mobility; and (ii) an exponentially decaying component L2 from more mobile, loosely bound water pool. Both proton relaxometry data and proton spectroscopy show that dry lyophilizate incubated in dry air, i.e., at a relative humidity (p/p0) of 0% reveals a relatively high hydration level. The observed liquid signal most likely originates from mobile membrane protons and a tightly bound water fraction that is sealed in pores of dry lyophilizate and thus restricted in mobility. The estimations suggest that the amount of sealed water does not exceed the value characteristic for the main hydration shell of a phospholipid. Proton spectra collected for dry lyophilizate of photosynthetic lamellae show a continuous decrease in the liquid signal component without a distinct freezing transition when it is cooled down to -60ºC, which is significantly lower than the homogeneous ice nucleation temperature [Bronshteyn, V.L. et al. Biophys. J. 65 (1993) 1853].

  4. Marinobacterium sp. strain DMS-S1 uses dimethyl sulphide as a sulphur source after light-dependent transformation by excreted flavins.

    Science.gov (United States)

    Hirano, Hiroyuki; Yoshida, Takako; Fuse, Hiroyuki; Endo, Takayuki; Habe, Hiroshi; Nojiri, Hideaki; Omori, Toshio

    2003-06-01

    Marinobacterium sp. strain DMS-S1 is a unique marine bacterium that can use dimethyl sulphide (DMS) as a sulphur source only in the presence of light. High-performance liquid chromatography (HPLC) analyses of the culture supernatant revealed that excreted factors, which could transform DMS to dimethyl sulphoxide (DMSO) under light, are FAD and riboflavin. In addition, FAD appeared to catalyse the photolysis of DMS to not only DMSO but also methanesulphonate (MSA), formate, formaldehyde and sulphate. As strain DMS-S1 can use sulphate and MSA as a sole sulphur source independently of light, the excretion of flavins appeared to support the growth on DMS under light. Furthermore, three out of 12 marine bacteria from IAM culture collection were found to be able to grow on DMS with the aid of photolysis by the flavins excreted. This is the first report that bacteria can use light to assimilate oceanic organic sulphur compounds outside the cells by excreting flavins as photosensitizers.

  5. A plastid gene phylogeny of the non-photosynthetic parasitic Orobanche (Orobanchaceae) and related genera.

    Science.gov (United States)

    Park, Jeong-Mi; Manen, Jean-François; Colwell, Alison E; Schneeweiss, Gerald M

    2008-07-01

    The phylogenetic relationships of the non-photosynthetic Orobanche sensu lato (Orobanchaceae), which includes some of the economically most important parasitic weeds, remain insufficiently understood and controversial. This concerns both the phylogenetic relationships within the genus, in particular its monophyly or lack thereof, and the relationships to other holoparasitic genera such as Cistanche or Conopholis. Here we present the first comprehensive phylogenetic study of this group based on a region from the plastid genome (rps2 gene). Although substitution rates appear to be elevated compared to the photosynthetic members of Orobanchaceae, relationships among the major lineages Cistanche, Conopholis plus Epifagus, Boschniakia rossica (Cham. & Schltdl.) B. Fedtsch., B. himalaica Hook. f. & Thomson, B. hookeri Walp. plus B. strobilacea A. Gray, and Orobanche s. l. remain unresolved. Resolution within Orobanche, however, is much better. In agreement with morphological, cytological and other molecular phylogenetic evidence, five lineages, corresponding to the four traditionally recognised sections (Gymnocaulis, Myzorrhiza, Orobanche, Trionychon) and O. latisquama Reut. ex Boiss. (of sect. Orobanche), can be distinguished. A combined analysis of plastid rps2 and nuclear ITS sequences of the holoparasitic genera results in more resolved and better supported trees, although the relationships among Orobanche s. l., Cistanche, and the clade including the remaining genera is unresolved. Therefore, rps2 is a marker from the plastid genome that is well-suited to be used in combination with other already established nuclear markers for resolving generic relationships of Orobanche and related genera.

  6. Response of Lemna minor L. to short-term cobalt exposure: The effect on photosynthetic electron transport chain and induction of oxidative damage

    Energy Technology Data Exchange (ETDEWEB)

    Begović, Lidija, E-mail: lbegovic@biologija.unios.hr [Josip Juraj Strossmayer University of Osijek, Department of Biology, Ulica cara Hadrijana 8/A, H R -31000 Osijek (Croatia); Mlinarić, Selma, E-mail: smlinaric@biologija.unios.hr [Josip Juraj Strossmayer University of Osijek, Department of Biology, Ulica cara Hadrijana 8/A, H R -31000 Osijek (Croatia); Antunović Dunić, Jasenka, E-mail: jantunovic@biologija.unios.hr [Josip Juraj Strossmayer University of Osijek, Department of Biology, Ulica cara Hadrijana 8/A, H R -31000 Osijek (Croatia); Katanić, Zorana, E-mail: zkatanic@biologija.unios.hr [Josip Juraj Strossmayer University of Osijek, Department of Biology, Ulica cara Hadrijana 8/A, H R -31000 Osijek (Croatia); Lončarić, Zdenko, E-mail: zdenko.loncaric@pfos.hr [Faculty of Agriculture, Josip Juraj Strossmayer University of Osijek, Ulica kralja Petra Svačića 1d, H R -31000 Osijek (Croatia); Lepeduš, Hrvoje, E-mail: hlepedus@yahoo.com [Faculty of Humanities and Social Sciences, Josip Juraj Strossmayer University of Osijek, Lorenza Jägera 9, HR-31000 Osijek (Croatia); Cesar, Vera, E-mail: vcesarus@yahoo.com [Josip Juraj Strossmayer University of Osijek, Department of Biology, Ulica cara Hadrijana 8/A, H R -31000 Osijek (Croatia)

    2016-06-15

    Highlights: • Cobalt (Co{sup 2+}) impaired the function of oxygen evolving complex (OEC) in L. minor L. • Electron transport through PSII components varied depending on Co{sup 2+} concentration. • K-band was proven to be suitable parameter for investigation of Co{sup 2+} toxicity. • Increased lipid peroxidation level showed early oxidative damage induced by Co{sup 2+}. - Abstract: The effect of two concentrations of cobalt (Co{sup 2+}) on photosynthetic activity and antioxidative response in Lemna minor L. were assessed 24, 48 and 72 h after the start of the exposure. Higher concentration of cobalt (1 mM) induced growth inhibition while lower concentration (0.01 mM) increased photosynthetic pigments content. Analysis of chlorophyll a fluorescence transients revealed high sensitivity of photosystem II primary photochemistry to excess of Co{sup 2+} especially at the higher concentration where decreased electron transport beyond primary quinone acceptor Q{sub A}{sup −} and impaired function of oxygen evolving complex (OEC) was observed. Due to impairment of OEC, oxygen production was decreased at higher Co{sup 2+} concentration. Activity of superoxide dismutase was mainly inhibited while lipid peroxidation increased, at both concentrations, indicating that cobalt-induced oxidative damage after short exposure and moreover, susceptibility of the membranes in the cell to cobalt toxicity. Results obtained in this study suggest possible application of used parameters as tools in assessment of early damage caused by metals.

  7. Developing the lithotectonic framework and model for sulphide mineralization in the Jebilet Massif, Morocco: implications for regional exploration

    OpenAIRE

    Lusty, Paul A.J.; Goodenough, Kathryn M.; Essaifi, Abderrahim; Maacha, Lhou

    2015-01-01

    The central Jebilet massif, part of the North African Variscan Belt, hosts significant polymetallic sulphide mineralization. It is generally considered syngenetic and has many features of volcanogenic massive sulphide (VMS) mineralization. However, some characteristics are not compatible with a classic VMS model and two alternative scenarios for formation have been proposed. Our preliminary research favours a complex, multi-stage development of the sulphide deposits...

  8. Determination of boron, silica, fluoride, MBAS, phenols, cyanide and sulphide

    International Nuclear Information System (INIS)

    Smith, R.

    1982-01-01

    This study forms part of the NIWR's series of interlaboratory comparison studies involving southern African laboratories engaged in water and wastewater analysis, and is concerned with the analysis of synthetic water samples by 31 laboratories for boron, silica, fluoride, methylene blue active substances (MBAS), phenols, cyanide and sulphide. The results obtained are evaluated and discussed. Recognised standard methods, or modifications of these methods, were used for most of the determinations. Results from the boron, silica and fluoride determinations showed, in general, acceptable accuracy and precision. Results from the MBAS, phenols, cyanide and sulphide determinations were, however, somewhat widespread, and illustrated the difficulty in obtaining reliable results from the measurement of relatively low levels of these determinands

  9. The separation of tungsten and molybdenum by the formation of sulphide complexes and extraction into a weak-base resin

    International Nuclear Information System (INIS)

    Fleming, C.A.

    1985-01-01

    The separation of molybdenum from tungten can be achieved if a solution containing molybdate and tungstate ions is reacted with sulphide ions, and the molybdenum sulphide is extracted with an anion-exchangeresin. The separation between molybdenum and tungsten is influenced byfactors such as the pH value of the solution, the concentrations of sulphide and resin in the solution, and the period of contact between theresin and the metal ions in solution. A fundamental study of the interaction between sulphide ions and molybdate or tungstate ions confirmed a mechanism proposed recently in the literature: MeOsup(2-)sub(4)+nHSsup(-)+nHsup(+) is equivalent to MeO 4 sub(-n)Ssub(n)sup(2-)+nH 2 O, where Me = molybdenum or tungsten and n = 1, 2, 3, or 4. In these reaction sequences, each successive step in the reaction (sulphur being substituted for oxygen) is slower than the preceding one, and the molybdate reactions with sulphide are several orders of magnitude faster than the analogous tungsten reactions. As a result, the extent of the complexing of tungsten with sulphide is minimal compared with that of molybdenum in the time span of the extraction experiments. However, the current investigation shows that this is not the cause of the selectivity of anion-exchange resins for molybdenum in this system, and that the separation factor between molybdenum and tungsten is much the same for the precursor tungstate anion as it is for the various tungsten sulphide anions. The selectivity of the resin for molybdenum apparently originates from a thermodynamic preference of the amine functional group on the resin for molybdenum sulphide anions over tungstate or tungsten sulphide anions. It is shown that, under optimum conditions, a separation factor of about 30 between molybdenum and tungsten can be achieved in this system

  10. Non-oxidative and oxidative torrefaction characterization and SEM observations of fibrous and ligneous biomass

    International Nuclear Information System (INIS)

    Chen, Wei-Hsin; Lu, Ke-Miao; Lee, Wen-Jhy; Liu, Shih-Hsien; Lin, Ta-Chang

    2014-01-01

    Highlights: • Non-oxidative and oxidative torrefaction of biomass is studied. • Two fibrous biomasses and two ligneous biomasses are tested. • SEM observations of four biomasses are provided. • Fibrous biomass is more sensitive to O 2 concentration than ligneous biomass. • The performance of non-oxidative torrefaction is better than that of oxidative torrefaction. - Abstract: Oxidative torrefaction is a method to reduce the operating cost of upgrading biomass. To understand the potential of oxidative torrefaction and its impact on the internal structure of biomass, non-oxidative and oxidative torrefaction of two fibrous biomass materials (oil palm fiber and coconut fiber) and two ligneous ones (eucalyptus and Cryptomeria japonica) at 300 °C for 1 h are studied and compared with each other. Scanning electron microscope (SEM) observations are also performed to explore the impact of torrefaction atmosphere on the lignocellulosic structure of biomass. The results indicate that the fibrous biomass is more sensitive to O 2 concentration than the ligneous biomass. In oxidative torrefaction, an increase in O 2 concentration decreases the solid yield. The energy yield is linearly proportional to the solid yield, which is opposite to the behavior of non-oxidative torrefaction. The performance of non-oxidative torrefaction is better than that of oxidative torrefaction. As a whole, ligneous biomass can be torrefied in oxidative environments at lower O 2 concentrations, whereas fibrous biomass is more suitable for non-oxidative torrefaction

  11. Reduced graphene oxide induces cytotoxicity and inhibits photosynthetic performance of the green alga Scenedesmus obliquus.

    Science.gov (United States)

    Du, Shaoting; Zhang, Peng; Zhang, Ranran; Lu, Qi; Liu, Lin; Bao, Xiaowei; Liu, Huijun

    2016-12-01

    Increased use of graphene materials might ultimately lead to their release into the environment. However, only a few studies have investigated the impact of graphene-based materials on green plants. In this study, the impact of reduced graphene oxide (RGO) on the microalgae Scenedesmus obliquus was evaluated to determine its phytotoxicity. Treatment with RGO suppressed the growth of the microalgae. The 72-h IC 50 values of RGO evaluated using the logistic and Gompertz models were 148 and 151 mg L -1 , respectively. RGO significantly inhibited Chl a and Chl a/b levels in the algal cells. Chlorophyll a fluorescence analysis showed that RGO significantly down-regulated photosystem II activity. The mechanism of how RGO inhibited algal growth and photosynthetic performance was determined by analyzing the alterations in ultrastructural morphology. RGO adhered to the algal cell surface as a semitranslucent coating. Cell wall damage and membrane integrity loss occurred in the treated cells. Moreover, nuclear chromatin clumping and starch grain number increase were noted. These changes might be attributed to the increase in malondialdehyde and reactive oxygen species levels, which might have exceeded the scavenging ability of antioxidant enzymes (including peroxidase and superoxide dismutase). RGO impaired the extra- and intra-cellular morphology and increased oxidative stress and thus inhibited algal growth and photosynthesis. Copyright © 2016 Elsevier Ltd. All rights reserved.

  12. Chemical bath deposition of indium sulphide thin films: preparation and characterization

    Energy Technology Data Exchange (ETDEWEB)

    Lokhande, C.D.; Ennaoui, A.; Patil, P.S.; Giersig, M.; Diesner, K.; Muller, M.; Tributsch, H. [Hahn-Meitner-Institut Berlin GmbH (Germany). Bereich Physikalische Chemie

    1999-02-26

    Indium sulphide (In{sub 2}S{sub 3}) thin films have been successfully deposited on different substrates under varying deposition conditions using chemical bath deposition technique. The deposition mechanism of In{sub 2}S{sub 3} thin films from thioacetamide deposition bath has been proposed. Films have been characterized with respect to their crystalline structure, composition, optical and electrical properties by means of X-ray diffraction, TEM, EDAX, optical absorption, TRMC (time resolved microwave conductivity) and RBS. Films on glass substrates were amorphous and on FTO (flourine doped tin oxide coated) glass substrates were polycrystalline (element of phase). The optical band gap of In{sub 2}S{sub 3} thin film was estimated to be 2.75 eV. The as-deposited films were photoactive as evidenced by TRMC studies. The presence of oxygen in the film was detected by RBS analysis. (orig.) 27 refs.

  13. Photosynthetic limitation and mechanisms of photoprotection under drought and recovery of Calotropis procera, an evergreen C3 from arid regions.

    Science.gov (United States)

    Rivas, Rebeca; Frosi, Gabriella; Ramos, Diego G; Pereira, Silvia; Benko-Iseppon, Ana M; Santos, Mauro G

    2017-09-01

    Calotropis procera is a C 3 plant native from arid environmental zones. It is an evergreen, shrubby, non-woody plant with intense photosynthetic metabolism during the dry season. We measured photosynthetic parameters and leaf biochemical traits, such as gas exchange, photochemical parameters, A/C i analysis, organic solutes, and antioxidant enzymes under controlled conditions in potted plants during drought stress, and following recovery conditions to obtain a better insight in the drought stress responses of C. procera. Indeed, different processes contribute to the drought stress resilience of C. procera and to the fast recovery after rehydration. The parameters analyzed showed that C. procera has a high efficiency for energy dissipation. The photosynthetic machinery is protected by a robust antioxidant system and photoprotective mechanisms such as alternative pathways for electrons (photorespiration and day respiration). Under severe drought stress, increased stomatal limitation and decreased biochemical limitation permitted C. procera to maintain maximum rate of Rubisco carboxylation (V c,max ) and photosynthetic rate (A max ). On the other hand, limitation of stomatal or mesophyll CO 2 diffusion did not impair fast recovery, maintaining V c,max , chloroplast CO 2 concentration (C c ) and mesophyll conductance (g m ) unchanged while electron flow used for RuBP carboxylation (J c ) and A max increased. The ability to tolerate drought stress and the fast recovery of this evergreen C 3 species was also due to leaf anti-oxidative stress enzyme activity, and photosynthetic pigments. Thus, these different drought tolerance mechanisms allowed high performance of photosynthetic metabolism by drought stressed plants during the re-watering period. Copyright © 2017 Elsevier Masson SAS. All rights reserved.

  14. Indicator minerals as guides to base metal sulphide mineralisation ...

    Indian Academy of Sciences (India)

    figures 3C, D). At the Bhuyari prospect (figure 1), gahnite is present in the quartz + biotite + muscovite + plagio- clase + gahnite + garnet + chlorite assemblage along with disseminated sulphides and is closely associated with the mineralized zone.

  15. Effects of sulphide ion on the corrosion behaviour of X52 steel in a carbon dioxide environment at temperature 40 deg. C

    International Nuclear Information System (INIS)

    Fatah, M.C.; Ismail, M.C.; Ari-Wahjoedi, B.; Kurnia, K.A.

    2011-01-01

    Research highlights: → We study the effect of sulphide ion on the corrosion behaviour of X52 steel. → Increasing sulphide ion concentration will increase the corrosion rate of X52 steel. → Increasing sulphide ion concentration will increase cathodic reaction. → Less protective film, also contribute to the increasing the corrosion rate. - Abstract: The electrochemical behaviour of X52 steel in the presence of sulphide at 40 deg. C in a CO 2 environment was investigated using the methods of linear polarization resistance (LPR), potentiodynamic sweep, electrochemical impedance spectroscopy (EIS). In addition, the surface of X52 steel was also studied using scanning electron microscopy (SEM). The results showed that the corrosion rate of X52 steel increased with increasing concentration of sulphide ion. Potentiodynamic curve showed that there were changes in cathodic branch due to the change in the nature of cathodic reaction in the presence of sulphide ion. EIS analysis showed the higher sulphide ion concentration, the higher adsorbed species on the steel surface that contributed in the cathodic reaction. Furthermore, SEM results showed crevices on the scale which indicated pitting tendency in sulphide ion solutions. The less protective film, probably mackinawite, also contributed to the increase of corrosion rate in the presence of sulphide ion.

  16. Porous silicon-based direct hydrogen sulphide fuel cells.

    Science.gov (United States)

    Dzhafarov, T D; Yuksel, S Aydin

    2011-10-01

    In this paper, the use of Au/porous silicon/Silicon Schottky type structure, as a direct hydrogen sulphide fuel cell is demonstrated. The porous silicon filled with hydrochlorid acid was developed as a proton conduction membrane. The Au/Porous Silicon/Silicon cells were fabricated by first creating the porous silicon layer in single-crystalline Si using the anodic etching under illumination and then deposition Au catalyst layer onto the porous silicon. Using 80 mM H2S solution as fuel the open circuit voltage of 0.4 V was obtained and maximum power density of 30 W/m2 at room temperature was achieved. These results demonstrate that the Au/Porous Silicon/Silicon direct hydrogen sulphide fuel cell which uses H2S:dH2O solution as fuel and operates at room temperature can be considered as the most promising type of low cost fuel cell for small power-supply units.

  17. Response of Lemna minor L. to short-term cobalt exposure: The effect on photosynthetic electron transport chain and induction of oxidative damage.

    Science.gov (United States)

    Begović, Lidija; Mlinarić, Selma; Antunović Dunić, Jasenka; Katanić, Zorana; Lončarić, Zdenko; Lepeduš, Hrvoje; Cesar, Vera

    2016-06-01

    The effect of two concentrations of cobalt (Co(2+)) on photosynthetic activity and antioxidative response in Lemna minor L. were assessed 24, 48 and 72h after the start of the exposure. Higher concentration of cobalt (1mM) induced growth inhibition while lower concentration (0.01mM) increased photosynthetic pigments content. Analysis of chlorophyll a fluorescence transients revealed high sensitivity of photosystem II primary photochemistry to excess of Co(2+) especially at the higher concentration where decreased electron transport beyond primary quinone acceptor QA(-) and impaired function of oxygen evolving complex (OEC) was observed. Due to impairment of OEC, oxygen production was decreased at higher Co(2+) concentration. Activity of superoxide dismutase was mainly inhibited while lipid peroxidation increased, at both concentrations, indicating that cobalt-induced oxidative damage after short exposure and moreover, susceptibility of the membranes in the cell to cobalt toxicity. Results obtained in this study suggest possible application of used parameters as tools in assessment of early damage caused by metals. Copyright © 2016 Elsevier B.V. All rights reserved.

  18. Draa Sfar, Morocco: A Visean (331 Ma) pyrrhotite-rich, polymetallic volcanogenic massive sulphide deposit in a Hercynian sediment-dominant terrane

    OpenAIRE

    Marcoux , Eric; Belkabir , Abdelhay; Gibson , Harold L.; Lentz , David; Ruffet , Gilles

    2008-01-01

    International audience; Draa Sfar is a Visean, stratabound, volcanogenic massive sulphide ore deposit hosted by a Hercynian carbonaceous, black shale-rich succession of the Jebilet terrane, Morocco. The ore deposit contains 10 Mt grading 5.3 wt.% Zn, 2 wt.% Pb, and 0.3 wt.% Cu within two main massive sulphides orebodies, Tazakourt (Zn-rich) and Sidi M'Barek (Zn–Cu rich). Pyrrhotite is by far the dominant sulphide (70 to 95% of total sulphides), sphalerite is fairly abundant, chalcopyrite and ...

  19. Construction of hybrid photosynthetic units using peripheral and core antennae from two different species of photosynthetic bacteria: detection of the energy transfer from bacteriochlorophyll a in LH2 to bacteriochlorophyll b in LH1.

    Science.gov (United States)

    Fujii, Ritsuko; Shimonaka, Shozo; Uchida, Naoko; Gardiner, Alastair T; Cogdell, Richard J; Sugisaki, Mitsuru; Hashimoto, Hideki

    2008-01-01

    Typical purple bacterial photosynthetic units consist of supra-molecular arrays of peripheral (LH2) and core (LH1-RC) antenna complexes. Recent atomic force microscopy pictures of photosynthetic units in intact membranes have revealed that the architecture of these units is variable (Scheuring et al. (2005) Biochim Bhiophys Acta 1712:109-127). In this study, we describe methods for the construction of heterologous photosynthetic units in lipid-bilayers from mixtures of purified LH2 (from Rhodopseudomonas acidophila) and LH1-RC (from Rhodopseudomonas viridis) core complexes. The architecture of these reconstituted photosynthetic units can be varied by controlling ratio of added LH2 to core complexes. The arrangement of the complexes was visualized by electron-microscopy in combination with Fourier analysis. The regular trigonal array of the core complexes seen in the native photosynthetic membrane could be regenerated in the reconstituted membranes by temperature cycling. In the presence of added LH2 complexes, this trigonal symmetry was replaced with orthorhombic symmetry. The small lattice lengths for the latter suggest that the constituent unit of the orthorhombic lattice is the LH2. Fluorescence and fluorescence-excitation spectroscopy was applied to the set of the reconstituted membranes prepared with various proportions of LH2 to core complexes. Remarkably, even though the LH2 complexes contain bacteriochlorophyll a, and the core complexes contain bacteriochlorophyll b, it was possible to demonstrate energy transfer from LH2 to the core complexes. These experiments provide a first step along the path toward investigating how changing the architecture of purple bacterial photosynthetic units affects the overall efficiency of light-harvesting.

  20. Pseudomonas mesophilica and an unnamed taxon, clinical isolates of pink-pigmented oxidative bacteria.

    Science.gov (United States)

    Gilardi, G L; Faur, Y C

    1984-10-01

    Twenty-one strains of pink-pigmented bacteria, isolated from human clinical specimens and an environmental source, were compared with Pseudomonas mesophilica ATCC 29983 and Protaminobacter ruber ATCC 8457. These isolates were gram-negative, oxidative rods which were motile by means of a single polar flagellum; gave positive catalase, indophenol oxidase, urease, and amylase reactions; and grew slowly at 30 degrees C. Fourteen isolates conformed to the designated type strains Pseudomonas mesophilica ATCC 29983 and Protaminobacter ruber ATCC 8457. The remaining seven strains represented an undescribed taxon. These pink bacteria appear to be invaders of debilitated patients with an underlying chronic disease.

  1. Transport of metals and sulphur in magmas by flotation of sulphide melt on vapour bubbles

    Science.gov (United States)

    Mungall, J. E.; Brenan, J. M.; Godel, B.; Barnes, S. J.; Gaillard, F.

    2015-03-01

    Emissions of sulphur and metals from magmas in Earth’s shallow crust can have global impacts on human society. Sulphur-bearing gases emitted into the atmosphere during volcanic eruptions affect climate, and metals and sulphur can accumulate in the crust above a magma reservoir to form giant copper and gold ore deposits, as well as massive sulphur anomalies. The volumes of sulphur and metals that accumulate in the crust over time exceed the amounts that could have been derived from an isolated magma reservoir. They are instead thought to come from injections of multiple new batches of vapour- and sulphide-saturated magmas into the existing reservoirs. However, the mechanism for the selective upward transfer of sulphur and metals is poorly understood because their main carrier phase, sulphide melt, is dense and is assumed to settle to the bottoms of magma reservoirs. Here we use laboratory experiments as well as gas-speciation and mass-balance models to show that droplets of sulphide melt can attach to vapour bubbles to form compound drops that float. We demonstrate the feasibility of this mechanism for the upward mobility of sulphide liquids to the shallow crust. Our work provides a mechanism for the atmospheric release of large amounts of sulphur, and contradicts the widely held assumption that dense sulphide liquids rich in sulphur, copper and gold will remain sequestered in the deep crust.

  2. Quantification of syntrophic fatty acid-{beta}-oxidizing bacteria in a mesophilic biogas reactor by oligonucleotide probe hybridization

    Energy Technology Data Exchange (ETDEWEB)

    Hansen, K.H.; Ahring, B.K.; Raskin, L.

    1999-11-01

    Small-subunit rRNA sequences were obtained for two saturated fatty acid-{beta}-oxidizing syntrophic bacteria, Syntrophomonas sapovorans and Syntrophomonas wolfei LYB, and sequence analysis confirmed their classification as members of the family Syntrophomonadaceae. S.wolfei LYB was closely related to S.wolfei subsp. solfei, but S. sapovorans did not cluster with the other members of the genus Syntrophomonas. Five oligonucleotide probes targeting the small-subunit rRNA of different groups within the family Syntrophomonadaceae, which contains all currently known saturated fatty acid-{beta}-oxidizing syntrophic bacteria, were developed and characterized. The probes were designed to be specific at the family, genus, and species levels and were characterized by temperature-of-dissociation and specificity studies. To demonstrate the usefulness of the probes for the detection and quantification of saturated fatty acid-{beta}-oxidizing syntrophic bacteria in methanogenic environments, the microbial community structure of a sample from a full-scale biogas plant was determined. Hybridization results with probes for syntrophic bacteria and methanogens were compared to specific methanogenic activities and microbial numbers determined with most-probable-number estimates. Most of the methanogenic rRNA was comprised of Methanomicrobiales rRNA, suggesting that members of this order served as the main hydrogen-utilizing microorganisms. Between 0.2 and 1% of the rRNA was attributed to the Syntrophomonadaceae, or which the majority was accounted for by the genus Syntrophomonas.

  3. Structural, theoretical and experimental models of photosynthetic antennas, donors and acceptors

    International Nuclear Information System (INIS)

    Barkigia, K.M.; Chantranupong, L.; Fajer, J.; Kehres, L.A.; Smith, K.M.

    1989-01-01

    Theoretical calculations, based on recent x-ray studies of bacterial reaction centers, suggest that the light-absorption properties of the special pair phototraps in bacteria are controlled by the interplanar spacing between the bacteriochlorophyll subunits that constitute the special pairs. The calculations offer attractively simple explanations for the range of absorption spectra exhibited by photosynthetic bacteria. The wide range of (bacterio)chlorophyll skeletal conformations revealed by x-ray diffraction studies raise the intriguing possibility that different conformations, imposed by protein constraints, can modulate the light-absorption and redox properties of the chromophores in vivo. Electron-nuclear double resonance data obtained for the primary acceptors in green plants suggest specific substituent orientations and hydrogen bonding that may help optimize the orientations of the acceptors relative to the donors

  4. Synthesis of non-siliceous mesoporous oxides.

    Science.gov (United States)

    Gu, Dong; Schüth, Ferdi

    2014-01-07

    Mesoporous non-siliceous oxides have attracted great interest due to their unique properties and potential applications. Since the discovery of mesoporous silicates in 1990s, organic-inorganic assembly processes by using surfactants or block copolymers as soft templates have been considered as a feasible path for creating mesopores in metal oxides. However, the harsh sol-gel conditions and low thermal stabilities have limited the expansion of this method to various metal oxide species. Nanocasting, using ordered mesoporous silica or carbon as a hard template, has provided possibilities for preparing novel mesoporous materials with new structures, compositions and high thermal stabilities. This review concerns the synthesis, composition, and parameter control of mesoporous non-siliceous oxides. Four synthesis routes, i.e. soft-templating (surfactants or block copolymers as templates), hard-templating (mesoporous silicas or carbons as sacrificial templates), colloidal crystal templating (3-D ordered colloidal particles as a template), and super lattice routes, are summarized in this review. Mesoporous metal oxides with different compositions have different properties. Non-siliceous mesoporous oxides are comprehensively described, including a discussion of constituting elements, synthesis, and structures. General aspects concerning pore size control, atomic scale crystallinity, and phase control are also reviewed.

  5. Treatment of high-salinity chemical wastewater by indigenous bacteria--bioaugmented contact oxidation.

    Science.gov (United States)

    Li, Qiang; Wang, Mengdi; Feng, Jun; Zhang, Wei; Wang, Yuanyuan; Gu, Yanyan; Song, Cunjiang; Wang, Shufang

    2013-09-01

    A 90 m(3) biological contact oxidation system in chemical factory was bioaugmented with three strains of indigenous salt-tolerant bacteria. These three strains were screened from contaminative soil in situ. Their activity of growth and degradation was investigated with lab-scale experiments. Their salt-tolerant mechanism was confirmed to be compatible-solutes strategy for moderately halophilic bacteria, with amino acid and betaine playing important roles. The running conditions of the system were recorded for 150 days. The indigenous bacteria had such high suitability that the reactor got steady rapidly and the removal of COD maintained above 90%. It was introduced that biofilm fragments in sedimentation tank were inversely flowed to each reaction tank, and quantitative PCR demonstrated that this process could successfully maintain the bacterial abundance in the reaction tanks. In addition, the T-RFLP revealed that bioaugmented strains dominated over others in the biofilm. Copyright © 2013 Elsevier Ltd. All rights reserved.

  6. Calculation of the radiative properties of photosynthetic microorganisms

    International Nuclear Information System (INIS)

    Dauchet, Jérémi; Blanco, Stéphane; Cornet, Jean-François; Fournier, Richard

    2015-01-01

    photosynthetic bacteria, cyanobacteria and eukaryotic microalgae. The obtained results are in very good agreement with the experimental measurements when the shape of the microorganisms is well described (in comparison to the standard volume-equivalent sphere approximation). As a main perspective, the consideration of the helical shape of Arthrospira platensis appears to be a key to an accurate estimation of its radiative properties. On the whole, the presented methodological chain also appears of great interest for other scientific communities such as atmospheric science, oceanography, astrophysics and engineering

  7. Calculation of the radiative properties of photosynthetic microorganisms

    Science.gov (United States)

    Dauchet, Jérémi; Blanco, Stéphane; Cornet, Jean-François; Fournier, Richard

    2015-08-01

    photosynthetic bacteria, cyanobacteria and eukaryotic microalgae. The obtained results are in very good agreement with the experimental measurements when the shape of the microorganisms is well described (in comparison to the standard volume-equivalent sphere approximation). As a main perspective, the consideration of the helical shape of Arthrospira platensis appears to be a key to an accurate estimation of its radiative properties. On the whole, the presented methodological chain also appears of great interest for other scientific communities such as atmospheric science, oceanography, astrophysics and engineering.

  8. Interaction of Peat Soil and Sulphidic Material Substratum: Role of Peat Layer and Groundwater Level Fluctuations on Phosphorus Concentration

    Directory of Open Access Journals (Sweden)

    Benito Heru Purwanto

    2014-09-01

    Full Text Available Phosphorus (P often becomes limiting factor for plants growth. Phosphorus geochemistry in peatland soil is associated with the presence of peat layer and groundwater level fluctuations. The research was conducted to study the role of peat layer and groundwater level fluctuations on P concentration in peatland. The research was conducted on deep, moderate and shallow peat with sulphidic material as substratum, peaty acid sulphate soil, and potential acid sulphate soil. While P concentration was observed in wet season, in transition from wet to dry season, and in dry season. Soil samples were collected by using peat borer according to interlayer and soil horizon. The results showed that peat layer might act as the main source of P in peatland with sulphidic material substratum. The upper peat layer on sulphidic material caused by groundwater level fluctuations had no directly effect on P concentration in the peat layers. Increased of P concentration in the lowest sulphidic layer might relate to redox reaction of iron in the sulphidic layer and precipitation process. Phosphorus concentration in peatland with sulphidic material as substratum was not influenced by peat thickness. However, depletion or disappearance of peat layer decreased P concentration in soil solution. Disappearance of peat layer means loss of a natural source of P for peatland with sulphidic material as substratum, therefore peat layer must be kept in order to maintain of peatlands.

  9. Methane oxidation coupled to oxygenic photosynthesis in anoxic waters

    Science.gov (United States)

    Milucka, Jana; Kirf, Mathias; Lu, Lu; Krupke, Andreas; Lam, Phyllis; Littmann, Sten; Kuypers, Marcel MM; Schubert, Carsten J

    2015-01-01

    Freshwater lakes represent large methane sources that, in contrast to the Ocean, significantly contribute to non-anthropogenic methane emissions to the atmosphere. Particularly mixed lakes are major methane emitters, while permanently and seasonally stratified lakes with anoxic bottom waters are often characterized by strongly reduced methane emissions. The causes for this reduced methane flux from anoxic lake waters are not fully understood. Here we identified the microorganisms and processes responsible for the near complete consumption of methane in the anoxic waters of a permanently stratified lake, Lago di Cadagno. Interestingly, known anaerobic methanotrophs could not be detected in these waters. Instead, we found abundant gamma-proteobacterial aerobic methane-oxidizing bacteria active in the anoxic waters. In vitro incubations revealed that, among all the tested potential electron acceptors, only the addition of oxygen enhanced the rates of methane oxidation. An equally pronounced stimulation was also observed when the anoxic water samples were incubated in the light. Our combined results from molecular, biogeochemical and single-cell analyses indicate that methane removal at the anoxic chemocline of Lago di Cadagno is due to true aerobic oxidation of methane fuelled by in situ oxygen production by photosynthetic algae. A similar mechanism could be active in seasonally stratified lakes and marine basins such as the Black Sea, where light penetrates to the anoxic chemocline. Given the widespread occurrence of seasonally stratified anoxic lakes, aerobic methane oxidation coupled to oxygenic photosynthesis might have an important but so far neglected role in methane emissions from lakes. PMID:25679533

  10. Photosynthetic water splitting

    Energy Technology Data Exchange (ETDEWEB)

    Greenbaum, E.

    1981-01-01

    The photosynthetic unit of hydrogen evolution, the turnover time of photosynthetic hydrogen production, and hydrogenic photosynthesis are discussed in the section on previous work. Recent results are given on simultaneous photoproduction of hydrogen and oxygen, kinetic studies, microscopic marine algae-seaweeds, and oxygen profiles.

  11. Treating landfill gas hydrogen sulphide with mineral wool waste (MWW) and rod mill waste (RMW).

    Science.gov (United States)

    Bergersen, Ove; Haarstad, Ketil

    2014-01-01

    Hydrogen sulphide (H2S) gas is a major odorant at municipal landfills. The gas can be generated from different waste fractions, for example demolition waste containing gypsum based plaster board. The removal of H2S from landfill gas was investigated by filtering it through mineral wool waste products. The flow of gas varied from 0.3 l/min to 3.0 l/min. The gas was typical for landfill gas with a mean H2S concentration of ca. 4500 ppm. The results show that the sulphide gas can effectively be removed by mineral wool waste products. The ratios of the estimated potential for sulphide precipitation were 19:1 for rod mill waste (RMW) and mineral wool waste (MWW). A filter consisting of a mixture of MWW and RMW, with a vertical perforated gas tube through the center of filter material and with a downward gas flow, removed 98% of the sulfide gas over a period of 80 days. A downward gas flow was more efficient in contacting the filter materials. Mineral wool waste products are effective in removing hydrogen sulphide from landfill gas given an adequate contact time and water content in the filter material. Based on the estimated sulphide removal potential of mineral wool and rod mill waste of 14 g/kg and 261 g/kg, and assuming an average sulphide gas concentration of 4500 ppm, the removal capacity in the filter materials has been estimated to last between 11 and 308 days. At the studied location the experimental gas flow was 100 times less than the actual gas flow. We believe that the system described here can be upscaled in order to treat this gas flow. Copyright © 2013 Elsevier Ltd. All rights reserved.

  12. FEATURES OF PHYSIOLOGICAL AND PHOTOSYNTHETIC ACTIVITY OF MAIZE PLANTS AT USING NON-TRADITIONAL ORGANIC FERTILIZERS

    Directory of Open Access Journals (Sweden)

    A. Kojuhov

    2012-07-01

    Full Text Available The use of fertilizers in cultivation of crops is an objective necessity. However, their use has a negative impact on environment and especially on the soil polluting it with heavy metals. Organic fertilizers can significantly improve physical and chemical soil properties and increase its fertility. In connection with deficiency of manure particular interest represents using of waste as non-conventional fertilizers, in particular waste of alcohol production. Using of high-dose alcohol stillage stronger growth processes and number of leaves, which leads to an increase of maize photosynthetic activity and productivity. Maximum formation of green mass was observed in variant with a dose of making alcohol stillage 40 m3/ha during vegetation.

  13. Removal of hydrogen sulphide from pig house using biofilter with fungi

    DEFF Research Database (Denmark)

    Hansen, Michael J.; Pedersen, Claus L.; Søgaard Jensen, Louise H.

    2018-01-01

    was to investigate if this high removal could be due to the presence of fungi. The removal of reduced sulphur compounds in a 600-mm wide cellulose biofilter was measured at depths of 0, 200, 400 and 600 mm and the results compared with estimated fungal hyphae surface area per biofilm area. Over 19 months, removal...... of hydrogen sulphide was measured during periods with and without fungi. The results demonstrate a correlation between the fungal hyphae surface area and the removal of hydrogen sulphide with the highest removal in the first 200 mm of the biofilter and decreasing removal with depth. During periods...... area caused by the hyphae....

  14. Nitrite oxidizing bacteria for water treatment in coastal aquaculture system

    Science.gov (United States)

    Noorak, S.; Rakkhiaw, S.; Limjirakhajornt, K.; Uppabullung, A.; Keawtawee, T.; Sangnoi, Y.

    2018-04-01

    This research aimed to isolate and characterize nitrite oxidizing bacteria and to study their capability for water quality improvement. Fourteen strains of bacteria with nitrite-oxidizing character were isolated after 21 days of enrichment in Pep-Beef-NOB medium contained NaNO2. Two strains, SF-1 and SF-5, showed highest nitrite removal rate for 42.42% and 37.2%, respectively. These strains were determined an efficiency of open-system wastewater treatment for 14 days. The results showed that control, SF-1 and SF-5 had remove ammonia from day 1 to day 6. At the end of the study, ammonia was removed by the control, SF-1 and SF-5 for 81.27%, 70.1% and 69.82%, respectively. Nitrite concentration was lowest at day 8 with removal rate of 98.73%, 98.3% and 97.24% from control, SF-1 and SF-5, respectively. However, nitrite concentration in control experiment was increased again at day 11 whereas in SF-1 and SF-5 were increased at day 13. Chemical Oxygen Demand (COD) was decreased by 77.78%, 73.50% and 78.63% in the control, SF-1 and SF-5, respectively. Biological Oxygen Demand (BOD) in the control, SF-1 and SF-5 were reduced by 85.92%, 79.53% and 82.09%, respectively. Based on 16S rRNA gene, SF-1 and SF-5 were identified as Bacillus vietnamensis and B. firmus, respectively.

  15. Photoelectrochemical cells based on photosynthetic systems: a review

    Directory of Open Access Journals (Sweden)

    Roman A. Voloshin

    2015-06-01

    Full Text Available Photosynthesis is a process which converts light energy into energy contained in the chemical bonds of organic compounds by photosynthetic pigments such as chlorophyll (Chl a, b, c, d, f or bacteriochlorophyll. It occurs in phototrophic organisms, which include higher plants and many types of photosynthetic bacteria, including cyanobacteria. In the case of the oxygenic photosynthesis, water is a donor of both electrons and protons, and solar radiation serves as inexhaustible source of energy. Efficiency of energy conversion in the primary processes of photosynthesis is close to 100%. Therefore, for many years photosynthesis has attracted the attention of researchers and designers looking for alternative energy systems as one of the most efficient and eco-friendly pathways of energy conversion. The latest advances in the design of optimal solar cells include the creation of converters based on thylakoid membranes, photosystems, and whole cells of cyanobacteria immobilized on nanostructured electrode (gold nanoparticles, carbon nanotubes, nanoparticles of ZnO and TiO2. The mode of solar energy conversion in photosynthesis has a great potential as a source of renewable energy while it is sustainable and environmentally safety as well. Application of pigments such as Chl f and Chl d (unlike Chl a and Chl b, by absorbing the far red and near infrared region of the spectrum (in the range 700-750 nm, will allow to increase the efficiency of such light transforming systems. This review article presents the last achievements in the field of energy photoconverters based on photosynthetic systems.

  16. Insights into the genome of large sulfur bacteria revealed by analysis of single filaments

    DEFF Research Database (Denmark)

    Mussmann, Marc; Hu, Fen Z.; Richter, Michael

    2007-01-01

    Beggiatoa to overcome non-overlapping availabilities of electron donors and acceptors while gliding between oxic and sulfidic zones. The first look into the genome of these filamentous sulfur-oxidizing bacteria substantially deepens the understanding of their evolution and their contribution to sulfur......Marine sediments are frequently covered by mats of the filamentous Beggiatoa and other large nitrate-storing bacteria that oxidize hydrogen sulfide using either oxygen or nitrate, which they store in intracellular vacuoles. Despite their conspicuous metabolic properties and their biogeochemical...

  17. Pathway of Fermentative Hydrogen Production by Sulfate-reducing Bacteria

    Energy Technology Data Exchange (ETDEWEB)

    Wall, Judy D. [Univ. of Missouri, Columbia, MO (United States)

    2015-02-16

    Biofuels are a promising source of sustainable energy. Such biofuels are intermediate products of microbial metabolism of renewable substrates, in particular, plant biomass. Not only are alcohols and solvents produced in this degradative process but energy-rich hydrogen as well. Non photosynthetic microbial hydrogen generation from compounds other than sugars has not been fully explored. We propose to examine the capacity of the abundant soil anaerobes, sulfate-reducing bacteria, for hydrogen generation from organic acids. These apparently simple pathways have yet to be clearly established. Information obtained may facilitate the exploitation of other microbes not yet readily examined by molecular tools. Identification of the flexibility of the metabolic processes to channel reductant to hydrogen will be useful in consideration of practical applications. Because the tools for genetic and molecular manipulation of sulfate-reducing bacteria of the genus Desulfovibrio are developed, our efforts will focus on two strains, D. vulgaris Hildenborough and Desulfovibrio G20.Therefore total metabolism, flux through the pathways, and regulation are likely to be limiting factors which we can elucidate in the following experiments.

  18. Oxidative Stress Parameters in Saliva and Its Association with Periodontal Disease and Types of Bacteria

    OpenAIRE

    Almerich-Silla, Jose Manuel; Montiel-Company, Jose María; Pastor, Sara; Serrano, Felipe; Puig-Silla, Miriam; Dasí, Francisco

    2015-01-01

    Objective. To determine the association between oxidative stress parameters with periodontal disease, bleeding, and the presence of different periodontal bacteria. Methods. A cross-sectional study in a sample of eighty-six patients, divided into three groups depending on their periodontal status. Thirty-three with chronic periodontitis, sixteen with gingivitis, and thirty-seven with periodontal healthy as control. Oxidative stress biomarkers (8-OHdG and MDA), total antioxidant capacity (TAOC)...

  19. Ammonia oxidizing bacteria community dynamics in a pilot-scale wastewater treatment plant.

    Directory of Open Access Journals (Sweden)

    Xiaohui Wang

    Full Text Available BACKGROUND: Chemoautotrophic ammonia oxidizing bacteria (AOB have the metabolic ability to oxidize ammonia to nitrite aerobically. This metabolic feature has been widely used, in combination with denitrification, to remove nitrogen from wastewater in wastewater treatment plants (WWTPs. However, the relative influence of specific deterministic environmental factors to AOB community dynamics in WWTP is uncertain. The ecological principles underlying AOB community dynamics and nitrification stability and how they are related are also poorly understood. METHODOLOGY/PRINCIPAL FINDINGS: The community dynamics of ammonia oxidizing bacteria (AOB in a pilot-scale WWTP were monitored over a one-year period by Terminal Restriction Fragment Length Polymorphism (T-RFLP. During the study period, the effluent ammonia concentrations were almost below 2 mg/L, except for the first 60 days, indicting stable nitrification. T-RFLP results showed that, during the test period with stable nitrification, the AOB community structures were not stable, and the average change rate (every 15 days of AOB community structures was 10% ± 8%. The correlations between T-RFLP profiles and 10 operational and environmental parameters were tested by Canonical Correlation Analysis (CCA and Mantel test. The results indicated that the dynamics of AOB community correlated most strongly with Dissolved Oxygen (DO, effluent ammonia, effluent Biochemical Oxygen Demand (BOD and temperature. CONCLUSIONS/SIGNIFICANCE: This study suggests that nitrification stability is not necessarily accompanied by a stable AOB community, and provides insight into parameters controlling the AOB community dynamics within bioreactors with stable nitrification.

  20. Photosynthetic and Ultrastructure Parameters of Maize Plants are Affected During the Phyto-Rhizoremediation Process of Degraded Metal Working Fluids.

    Science.gov (United States)

    Grijalbo, Lucía; Gutierrez Mañero, Francisco Javier; Fernandez-Pascual, Mercedes; Lucas, Jose Antonio

    2015-01-01

    A phyto-rhizoremediation system using corn and esparto fiber as rooting support to remediate degraded metal working fluids (dMWFs) has been developed in the present study. In order to improve the process, plants were inoculated at the root level with bacteria either individually, and with a consortium of strains. All strains used were able to grow with MWFs. The results show that this system significantly lowers the Chemical Oxygen Demand below legal limits within 5 days. However, results were only improved with the bacterial consortium. Despite the effectiveness of the phyto-rhizoremediation process, plants are damaged at the photosynthetic level according to the photosynthetic parameters measured, as well as at the ultrastructure of the vascular cylinder and the Bundle Sheath Cells. Interestingly, the bacterial inoculation protects against this damage. Therefore, it seems that that the inoculation with bacteria can protect the plants against these harmful effects.

  1. A plastid gene phylogeny of the non-photosynthetic parasitic Orobanche (Orobanchaceae) and related genera

    Science.gov (United States)

    Park, J.-M.; Manen, J.-F.; Colwell, A.E.; Schneeweiss, G.M.

    2008-01-01

    The phylogenetic relationships of the non-photosynthetic Orobanche sensu lato (Orobanchaceae), which includes some of the economically most important parasitic weeds, remain insufficiently understood and controversial. This concerns both the phylogenetic relationships within the genus, in particular its monophyly or lack thereof, and the relationships to other holoparasitic genera such as Cistanche or Conopholis. Here we present the first comprehensive phylogenetic study of this group based on a region from the plastid genome (rps2 gene). Although substitution rates appear to be elevated compared to the photosynthetic members of Orobanchaceae, relationships among the major lineages Cistanche, Conopholis plus Epifagus, Boschniakia rossica (Cham. & Schltdl.) B. Fedtsch., B. himalaica Hook. f. & Thomson, B. hookeri Walp. plus B. strobilacea A. Gray, and Orobanche s. l. remain unresolved. Resolution within Orobanche, however, is much better. In agreement with morphological, cytological and other molecular phylogenetic evidence, five lineages, corresponding to the four traditionally recognised sections (Gymnocaulis, Myzorrhiza, Orobanche, Trionychon) and O. latisquama Reut. ex Boiss. (of sect. Orobanche), can be distinguished. A combined analysis of plastid rps2 and nuclear ITS sequences of the holoparasitic genera results in more resolved and better supported trees, although the relationships among Orobanche s. l., Cistanche, and the clade including the remaining genera is unresolved. Therefore, rps2 is a marker from the plastid genome that is well-suited to be used in combination with other already established nuclear markers for resolving generic relationships of Orobanche and related genera. ?? 2008 The Botanical Society of Japan and Springer.

  2. Identification of the intermediates of in vivo oxidation of 1 ,4-dioxane by monooxygenase-containing bacteria.

    Science.gov (United States)

    Mahendra, Shaily; Petzold, Christopher J; Baidoo, Edward E; Keasling, Jay D; Alvarez-Cohen, Lisa

    2007-11-01

    1,4-dioxane is a probable human carcinogen and an emerging water contaminant. Monooxygenase-expressing bacteria have been shown to degrade dioxane via growth-supporting as well as cometabolic mechanisms. In this study, the intermediates of dioxane degradation by monooxygenase-expressing bacteria were determined by triple quadrupole-mass spectrometry and Fourier transform ion cyclotron resonance-mass spectrometry. The major intermediates were identified as 2-hydroxyethoxyacetic acid (HEAA), ethylene glycol, glycolate, and oxalate. Studies with uniformly labeled 14C dioxane showed that over 50% of the dioxane was mineralized to CO2 by CB1190, while 5% became biomass-associated after 48 h. Volatile organic acids and non-volatiles, respectively, accounted for 20 and 11% of the radiolabeled carbon. Although strains cometabolizing dioxane exhibited limited transformation capacities, nearly half of the initial dioxane was recovered as CO2. On the basis of these analytical results, we propose a pathway for dioxane oxidation by monooxygenase-expressing cells in which dioxane is first converted to 2-hydroxy-1,4-dioxane, which is spontaneously oxidized to HEAA. During a second monooxygenation step, HEAA is further hydroxylated, resulting in a mixture of dihydroxyethoxyacetic acids with a hydroxyl group at the ortho or para position. After cleavage of the second ether bond, small organic molecules such as ethylene glycol, glycolate, glyoxalate, and oxalate are progressively formed, which are then mineralized to CO2 via common cellular metabolic pathways. Bioremediation of dioxane via this pathway is not expected to cause an accumulation of toxic compounds in the environment.

  3. Non-thermal hydrogen plasma processing effectively increases the antibacterial activity of graphene oxide

    Science.gov (United States)

    Ke, Zhigang; Ma, Yulong; Zhu, Zhongjie; Zhao, Hongwei; Wang, Qi; Huang, Qing

    2018-01-01

    Graphene-based materials (GMs) are promising antibacterial agents which provide an alternative route to treat pathogenic bacteria with resistance to conventional antibiotics. To further improve their antibacterial activity, many methods have been developed to functionalize the GMs with chemicals. However, the application of additional chemicals may pose potential risks to the environment and human being. Herein, a radio-frequency-driven inductively coupled non-thermal hydrogen plasma was used to treat and reduce graphene oxide (GO) without using any other chemicals, and we found that the plasma-reduced GO (prGO) is with significantly higher bactericidal activity against Escherichia coli. The mechanism of the increased antibacterial activity of prGO is due to that plasma processing breaks down the GO sheets into smaller layers with more rough surface defects, which can thus induce more destructive membrane damages to the bacteria. This work sets another good example, showing that plasma processing is a green and low-cost alternative for GM modification for biomedical applications.

  4. A Non-invasive and Real-time Monitoring of the Regulation of Photosynthetic Metabolism Biosensor Based on Measurement of Delayed Fluorescence in Vivo

    Directory of Open Access Journals (Sweden)

    Junsheng Wang

    2007-01-01

    Full Text Available In this paper, a new principle biosensor for non-invasive monitoring of theregulation of photosynthetic metabolism based on quantitative measurement of delayedfluorescence (DF is developed. The biosensor, which uses light-emitting diode lattice asexcitation light source and a compact Single Photon Counting Module to collect DF signal,is portable and can evaluate plant photosynthesis capacity in vivo. Compared with itsprimary version in our previous report, the biosensor can better control environmentalfactors. Moreover, the improved biosensor can automatically complete the measurements oflight and CO2 response curves of DF intensity. In the experimental study, the testing of theimproved biosensor has been made in soybean (Glycine max Zaoshu No. 18 seedlingstreated with NaHSO3 to induce changes in seedlings growth and photosynthetic metabolism.Contrast evaluations of seedlings photosynthesis were made from measurements of netphotosynthesis rate (Pn based on consumption of CO2 in tested plants. Current testingresults have demonstrated that the improved biosensor can accurately determine theregulatory effects of NaHSO3 on photosynthetic metabolism. Therefore, the biosensorpresented here could be potential useful for real-time monitoring the regulatory effects ofplant growth regulators (PGRs and other exogenous chemical factors on plant growth andphotosynthetic metabolism.

  5. Identification of novel potential acetate-oxidizing bacteria in an acetate-fed methanogenic chemostat based on DNA stable isotope probing.

    Science.gov (United States)

    Wang, Hui-Zhong; Gou, Min; Yi, Yue; Xia, Zi-Yuan; Tang, Yue-Qin

    2018-05-11

    Acetate is a significant intermediate of anaerobic fermentation. There are two pathways for converting acetate to CH 4 and CO 2 : acetoclastic methanogenesis by acetoclastic methanogens, and syntrophic acetate oxidation by acetate-oxidizing bacteria (AOB) and hydrogenotrophic methanogens. Detailed investigations of syntrophic acetate-oxidizing bacteria (SAOB) should contribute to the elucidation of the microbial mechanisms of methanogenesis. In this study, we investigated the major phylogenetic groups of acetate-utilizing bacteria (AUB) in a mesophilic methanogenic chemostat fed with acetate as the sole carbon source by using DNA stable isotope probing (SIP) technology. The results indicated that acetoclastic methanogenesis and acetate oxidization/hydrogenotrophic methanogenesis coexisted in the mesophilic chemostat fed with acetate, operated at a dilution rate of 0.1 d -1 . OTU Ace13(9-17) (KU869530), Ace13(9-4) (KU667241), and Ace13(9-23) (KU667236), assigned to the phyla Firmicutes and Bacteroidetes, were probably potential SAOB in the chemostat, which needs further investigation. Species in the phyla Proteobacteria, Deferribacteres, Acidobacteria, Spirochaetes and Actinobacteria were probably capable of utilizing acetate for their growth. Methanoculleus was likely to be the preferred hydrogenotrophic methanogen for syntrophy with AOB in the chemostat.

  6. Surfactant free nickel sulphide nanoparticles for high capacitance supercapacitors

    Science.gov (United States)

    Nandhini, S.; Muralidharan, G.

    2018-04-01

    The surfactant free nickel sulphide nanoparticles were synthesized via facile hydrothermal method towards supercapacitor applications. The formation of crystalline spherical nanoparticles was confirmed through structural and morphological studies. Electrochemical behaviour of the electrode was analyzed using cyclic voltammetry (CV), galvanostatic charge-discharge studies (GCD) and electrochemical impedance spectroscopy (EIS). The CV studies imply that specific capacitance of the electrode arises from a combination of surface adsorption and Faradic reaction. The NiS electrode delivered a specific capacitance of about 529 F g-1 at a current density of 2 A g-1 (GCD measurements). A profitable charge transfer resistance of 0.5 Ω was obtained from EIS. The 100 % of capacity retention even after 2000 repeated charge-discharge cycles could be observed in 2 M KOH electrolyte at a much larger rate of 30 A g-1. The experimental results suggest that nickel sulphide is a potential candidate for supercapacitor applications.

  7. New molecular method to detect denitrifying anaerobic methane oxidation bacteria from different environmental niches.

    Science.gov (United States)

    Xu, Sai; Lu, Wenjing; Muhammad, Farooq Mustafa; Liu, Yanting; Guo, Hanwen; Meng, Ruihong; Wang, Hongtao

    2018-03-01

    The denitrifying anaerobic methane oxidation is an ecologically important process for reducing the potential methane emission into the atmosphere. The responsible bacterium for this process was Candidatus Methylomirabilis oxyfera belonging to the bacterial phylum of NC10. In this study, a new pair of primers targeting all the five groups of NC10 bacteria was designed to amplify NC10 bacteria from different environmental niches. The results showed that the group A was the dominant NC10 phylum bacteria from the sludges and food waste digestate while in paddy soil samples, group A and group B had nearly the same proportion. Our results also indicated that NC10 bacteria could exist in a high pH environment (pH9.24) from the food waste treatment facility. The Pearson relationship analysis showed that the pH had a significant positive relationship with the NC10 bacterial diversity (pbacteria. Copyright © 2017. Published by Elsevier B.V.

  8. Interactions among sulfide-oxidizing bacteria

    Science.gov (United States)

    Poplawski, R.

    1985-01-01

    The responses of different phototrophic bacteria in a competitive experimental system are studied, one in which primary factors such as H2S or light limited photometabolism. Two different types of bacteria shared one limited source of sulfide under specific conditions of light. The selection of a purple and a green sulfur bacteria and the cyanobacterium was based on their physiological similarity and also on the fact that they occur together in microbial mats. They all share anoxygenic photosynthesis, and are thus probably part of an evolutionary continuum of phototrophic organisms that runs from, strictly anaerobic physiology to the ability of some cyanobacteria to shift between anoxygenic bacterial style photosynthesis and the oxygenic kind typical of eukaryotes.

  9. Determination of photosynthetic and enzymatic biomarkers sensitivity used to evaluate toxic effects of copper and fludioxonil in alga Scenedesmus obliquus

    Energy Technology Data Exchange (ETDEWEB)

    Dewez, David [Departement de Chimie et de Biochimie, Centre TOXEN, Universite du Quebec a Montreal, CP 8888, Succursale Centre-Ville, Montreal, Quebec, H3C 3P8 (Canada); Geoffroy, Laure [Laboratoire d' Eco-Toxicologie, Unite de recherche ' Vignes et Vins de Champagne' , UPRES-EA 2069, Universite de Reims Champagne-Ardenne BP 1039, F51687 REIMS CEDEX 2 (France); Vernet, Guy [Laboratoire d' Eco-Toxicologie, Unite de recherche ' Vignes et Vins de Champagne' , UPRES-EA 2069, Universite de Reims Champagne-Ardenne BP 1039, F51687 REIMS CEDEX 2 (France); Popovic, Radovan [Departement de Chimie et de Biochimie, Centre TOXEN, Universite du Quebec a Montreal, CP 8888, Succursale Centre-Ville, Montreal, Quebec, H3C 3P8 (Canada)]. E-mail: popovic.radovan@uqam.ca

    2005-08-30

    Modulated PAM fluorometry and Plant Efficiency Analyser methods were used to investigate photosynthetic fluorescence parameters of alga Scenedesmus obliquus exposed to inhibitory effect of fungicides copper sulphate and fludioxonil (N-(4-nitrophenyl)-N'-propyl-uree). The change of those parameters were studied when alga S. obliquus have been exposed during 48 h to different concentrations of fungicides (1, 2 and 3 mg l{sup -1}). Under the same condition, enzymatic activities of catalase, ascorbate peroxidase, glutathione reductase and glutathione S-transferase were investigated to evaluate antioxidative response to fungicides effects. The change of sensitivity of those parameters was dependent to the mode of fungicide action, their concentration and time of exposure. For copper effects, the most indicative photosynthetic biomarkers were parameters Q {sub N} as non-photochemical fluorescence quenching, Q {sub Emax} as the proton induced fluorescence quenching and ABS/RC as the antenna size per photosystem II reaction center. Copper induced oxidative stress was indicated by increased activity of catalase serving as the most sensitive and valuable enzymatic biomarker. On the other hand, fludioxonil effect on photosynthetic parameters was very negligible and consequently not very useful as biomarkers. However, fludioxonil induced strong antioxidative activities associated with cytosol enzymes, as we found for catalase, ascorbate peroxidase and glutathione S-transferase activities. By obtained results, we may suggest for the activation of those enzymes to be sensitive and valuable biomarkers of oxidative stress induced by fludioxonil. Determination of biomarkers sensitivity may offer advantages in providing real criteria to use them for ecotoxicological diagnostic studies.

  10. Determination of photosynthetic and enzymatic biomarkers sensitivity used to evaluate toxic effects of copper and fludioxonil in alga Scenedesmus obliquus

    International Nuclear Information System (INIS)

    Dewez, David; Geoffroy, Laure; Vernet, Guy; Popovic, Radovan

    2005-01-01

    Modulated PAM fluorometry and Plant Efficiency Analyser methods were used to investigate photosynthetic fluorescence parameters of alga Scenedesmus obliquus exposed to inhibitory effect of fungicides copper sulphate and fludioxonil (N-(4-nitrophenyl)-N'-propyl-uree). The change of those parameters were studied when alga S. obliquus have been exposed during 48 h to different concentrations of fungicides (1, 2 and 3 mg l -1 ). Under the same condition, enzymatic activities of catalase, ascorbate peroxidase, glutathione reductase and glutathione S-transferase were investigated to evaluate antioxidative response to fungicides effects. The change of sensitivity of those parameters was dependent to the mode of fungicide action, their concentration and time of exposure. For copper effects, the most indicative photosynthetic biomarkers were parameters Q N as non-photochemical fluorescence quenching, Q Emax as the proton induced fluorescence quenching and ABS/RC as the antenna size per photosystem II reaction center. Copper induced oxidative stress was indicated by increased activity of catalase serving as the most sensitive and valuable enzymatic biomarker. On the other hand, fludioxonil effect on photosynthetic parameters was very negligible and consequently not very useful as biomarkers. However, fludioxonil induced strong antioxidative activities associated with cytosol enzymes, as we found for catalase, ascorbate peroxidase and glutathione S-transferase activities. By obtained results, we may suggest for the activation of those enzymes to be sensitive and valuable biomarkers of oxidative stress induced by fludioxonil. Determination of biomarkers sensitivity may offer advantages in providing real criteria to use them for ecotoxicological diagnostic studies

  11. Melatonin Improves the Photosynthetic Carbon Assimilation and Antioxidant Capacity in Wheat Exposed to Nano-ZnO Stress

    Directory of Open Access Journals (Sweden)

    Zhiyu Zuo

    2017-10-01

    Full Text Available The release of nanoparticles into the environment is inevitable, which has raised global environmental concern. Melatonin is involved in various stress responses in plants. The present study investigated the effects of melatonin on photosynthetic carbon (C assimilation and plant growth in nano-ZnO stressed plants. It was found that melatonin improved the photosynthetic C assimilation in nano-ZnO stressed wheat plants, mainly due to the enhanced photosynthetic energy transport efficiency, higher chlorophyll concentration and higher activities of Rubisco and ATPases. In addition, melatonin enhanced the activities of antioxidant enzymes to protect the photosynthetic electron transport system in wheat leaves against the oxidative burst caused by nano-ZnO stress. These results suggest that melatonin could improve the tolerance of wheat plants to nano-ZnO stress.

  12. Evaluating primers for profiling anaerobic ammonia oxidizing bacteria within freshwater environments.

    Directory of Open Access Journals (Sweden)

    Puntipar Sonthiphand

    Full Text Available Anaerobic ammonia oxidizing (anammox bacteria play an important role in transforming ammonium to nitrogen gas and contribute to fixed nitrogen losses in freshwater environments. Understanding the diversity and abundance of anammox bacteria requires reliable molecular tools, and these are not yet well established for these important Planctomycetes. To help validate PCR primers for the detection of anammox bacteria within freshwater ecosystems, we analyzed representative positive controls and selected samples from Grand River and groundwater sites, both from Ontario, Canada. The objectives of this study were to identify a suitable anammox denaturing gradient gel electrophoresis (DGGE fingerprint method by using GC-clamp modifications to existing primers, and to verify the specificity of anammox-specific primers used for DGGE, cloning and qPCR methods. Six primer combinations were tested from four published primer sets (i.e. A438f/A684r, Amx368f/Amx820r, An7f/An1388r, and Pla46/1392r for both direct and nested PCR amplifications. All PCR products were run subsequently on DGGE gels to compare the resulting patterns. Two anammox-specific primer combinations were also used to generate clone libraries and quantify anammox bacterial 16S rRNA genes with qPCR. The primer set A438f/A684r was highly specific to anammox bacteria, provided reliable DGGE fingerprints and generated a high proportion of anammox-related clones. A second primer set (Amx368f/Amx820r was anammox specific, based on clone library analysis, but PCR products from different candidate species of anammox bacteria resolved poorly using DGGE analysis. Both DGGE and cloning results revealed that Ca. Brocadia and an uncharacterized anammox bacterial cluster represented the majority of anammox bacteria found in Grand River sediment and groundwater samples, respectively. Together, our results demonstrate that although Amx368f/Amx820r was useful for anammox-specific qPCR and clone library

  13. The reaction of monochloramine and hydroxylamine: implications for ammonia–oxidizing bacteria in chloraminated drinking water

    Science.gov (United States)

    Drinking water chloramine use may promote ammonia–oxidizing bacteria (AOB) growth because of naturally occurring ammonia, residual ammonia remaining from chloramine formation, and ammonia released from chloramine decay and demand. A rapid chloramine residual loss is often associa...

  14. Identification of Antimony- and Arsenic-Oxidizing Bacteria Associated with Antimony Mine Tailing

    Science.gov (United States)

    Hamamura, Natsuko; Fukushima, Koh; Itai, Takaaki

    2013-01-01

    Antimony (Sb) is a naturally occurring toxic element commonly associated with arsenic (As) in the environment and both elements have similar chemistry and toxicity. Increasing numbers of studies have focused on microbial As transformations, while microbial Sb interactions are still not well understood. To gain insight into microbial roles in the geochemical cycling of Sb and As, soils from Sb mine tailing were examined for the presence of Sb- and As-oxidizing bacteria. After aerobic enrichment culturing with AsIII (10 mM) or SbIII (100 μM), pure cultures of Pseudomonas- and Stenotrophomonas-related isolates with SbIII oxidation activities and a Sinorhizobium-related isolate capable of AsIII oxidation were obtained. The AsIII-oxidizing Sinorhizobium isolate possessed the aerobic arsenite oxidase gene (aioA), the expression of which was induced in the presence of AsIII or SbIII. However, no SbIII oxidation activity was detected from the Sinorhizobium-related isolate, suggesting the involvement of different mechanisms for Sb and As oxidation. These results demonstrate that indigenous microorganisms associated with Sb mine soils are capable of Sb and As oxidation, and potentially contribute to the speciation and mobility of Sb and As in situ. PMID:23666539

  15. Quantitative analysis of O-2 and Fe2+ profiles in gradient tubes for cultivation of microaerophilic Iron(II)-oxidizing bacteria

    DEFF Research Database (Denmark)

    Lueder, U.; Druschel, G.; Emerson, D.

    2018-01-01

    The classical approach for the cultivation of neutrophilic microaerophilic Fe(II)-oxidizing bacteria is agar-based gradient tubes where these bacteria find optimal growth conditions in opposing gradients of oxygen (O-2) and dissolved Fe(II) (Fe2+). The goals of this study were to quantify...... imply that transfer of cultures to fresh tubes within 48-72 h is crucial to provide optimal growth conditions for microaerophilic Fe(II)-oxidizers, particularly for the isolation of new strains....

  16. Development of a novel artificial medium based on utilization of algal photosynthetic metabolites by symbiotic heterotrophs.

    Science.gov (United States)

    Watanabe, K; Imase, M; Aoyagi, H; Ohmura, N; Saiki, H; Tanaka, H

    2008-09-01

    (i) Quantitative and qualitative analyses of photosynthetic metabolites of Chlorella sorokiniana and elucidation of the mechanism of their utilization by algal symbionts. (ii) Development of artificial medium that imitates photoautotroph-heterotroph interaction and investigation of its suitability for isolation of novel microbes from the environment. Various components, including free dissolved carbohydrates, nitrogenous compounds and vitamin, were detected and together contributed 11.1% (as carbon content) of the total photosynthetic metabolites in the medium. Utilization of these photosynthetic metabolites in algal culture broth by algal symbionts was studied. Many symbionts showed specific utilization patterns. A novel artificial extracellular released organic carbon medium, which imitated the nutritional conditions surrounding algae, was developed based on the pattern of utilization of the algal metabolites by the symbiotic heterotrophs. About 42.9% of the isolates were closely related to photoautotrophic-dependent and oligotrophic bacteria. With the novel artificial medium, it was possible to selectively isolate some bacterial strains. Synthetic bacterial growth medium is an important and basic tool for bacterial isolation from environmental samples. The current study shows that preferential separation of typical bacterial subset can be achieved by using artificial medium that mimics photosynthetic metabolites.

  17. Comparison of Methods for Estimating Fractional Cover of Photosynthetic and Non-Photosynthetic Vegetation in the Otindag Sandy Land Using GF-1 Wide-Field View Data

    Directory of Open Access Journals (Sweden)

    Xiaosong Li

    2016-09-01

    Full Text Available Photosynthetic vegetation (PV and non-photosynthetic vegetation (NPV are important ground cover types for desertification monitoring and land management. Hyperspectral remote sensing has been proven effective for separating NPV from bare soil, but few studies determined fractional cover of PV (fpv and NPV (fnpv using multispectral information. The purpose of this study is to evaluate several spectral unmixing approaches for retrieval of fpv and fnpv in the Otindag Sandy Land using GF-1 wide-field view (WFV data. To deal with endmember variability, pixel-invariant (Spectral Mixture Analysis, SMA and pixel-variable (Multi-Endmember Spectral Mixture Analysis, MESMA, and Automated Monte Carlo Unmixing Analysis, AutoMCU endmember selection approaches were applied. Observed fractional cover data from 104 field sites were used for comparison. For fpv, all methods show statistically significant correlations with observed data, among which AutoMCU had the highest performance (R2 = 0.49, RMSE = 0.17, followed by MESMA (R2 = 0.48, RMSE = 0.21, and SMA (R2 = 0.47, RMSE = 0.27. For fnpv, MESMA had the lowest performance (R2 = 0.11, RMSE = 0.24 because of coupling effects of the NPV and bare soil endmembers, SMA overestimates fnpv (R2 = 0.41, RMSE = 0.20, but is significantly correlated with observed data, and AutoMCU provides the most accurate predictions of fnpv (R2 = 0.49, RMSE = 0.09. Thus, the AutoMCU approach is proven to be more effective than SMA and MESMA, and GF-1 WFV data are capable of distinguishing NPV from bare soil in the Otindag Sandy Land.

  18. Studies on electrodeposited silver sulphide thin films by double exposure holographic interferometry

    International Nuclear Information System (INIS)

    Prabhune, V.B.; Shinde, N.S.; Fulari, V.J.

    2008-01-01

    Silver sulphide (Ag 2 S) thin films have been deposited on to stainless steel and fluorine doped tin oxide (FTO) glass substrates by the electrodeposition process, in potentiostatic mode using silver nitrate (AgNO 3 ), sodium thiosulphate (Na 2 S 2 O 3 ) as a precursor sources and Ethylene Diamine Tetra Acetic Acid (EDTA) was used as a complexing agent. The deposition potential of the compound was investigated by cyclic voltammetry. The structural and optical properties of the deposited films have been studied using X-ray diffraction (XRD) and optical absorption techniques, respectively. XRD studies reveal that the films are polycrystalline with monoclinic crystal structure. Optical absorption study shows the presence of direct transition with bandgap energy 1.1 eV. The determination of thickness and stress of the Ag 2 S thin films was carried out by Double Exposure Holographic Interferometry (DEHI) technique.

  19. Ecophysiology of the Anammox Bacteria

    NARCIS (Netherlands)

    Kartal, M.B.

    2008-01-01

    Anaerobic ammonium oxidizing (anammox) bacteria oxidize ammonium to dinitrogen gas with nitrite as the electron acceptor. These bacteria are the key players in the global nitrogen cycle, responsible for the most of nitrogen production in natural ecosystems. The anammox process is also a

  20. On some derived compounds of fluorides of Cerium III or IV: defined compounds and non stoichiometric phases

    International Nuclear Information System (INIS)

    Besse, Jean-Pierre

    1968-01-01

    This research study addresses the study of rare earth fluorides. It reports the preparation and study of new fluoro-cerates (IV) in order to complete the set of already known compounds (ammonium fluoro-cerate, and alkaline earth compounds), the study of binary CeF 3 binary systems, monovalent and divalent fluorides, and CeF 3 -NF 2 -N'F ternary systems, and the study of non stoichiometric phases in CeF 3 oxides, sulphides and selenides [fr

  1. Relative contributions of archaea and bacteria to microbial ammonia oxidation differ under different conditions during agricultural waste composting.

    Science.gov (United States)

    Zeng, Guangming; Zhang, Jiachao; Chen, Yaoning; Yu, Zhen; Yu, Man; Li, Hui; Liu, Zhifeng; Chen, Ming; Lu, Lunhui; Hu, Chunxiao

    2011-10-01

    The aim of this study was to compare the relative contribution of ammonia-oxidizing archaea (AOA) and bacteria (AOB) to nitrification during agricultural waste composting. The AOA and AOB amoA gene abundance and composition were determined by quantitative PCR and denaturing gradient gel electrophoresis (DGGE), respectively. The results showed that the archaeal amoA gene was abundant throughout the composting process, while the bacterial amoA gene abundance decreased to undetectable level during the thermophilic and cooling stages. DGGE showed more diverse archaeal amoA gene composition when the potential ammonia oxidation (PAO) rate reached peak values. A significant positive relationship was observed between the PAO rate and the archaeal amoA gene abundance (R²=0.554; Parchaea dominated ammonia oxidation during the thermophilic and cooling stages. Bacteria were also related to ammonia oxidation activity (R²=0.503; P=0.03) especially during the mesophilic and maturation stages. Copyright © 2011 Elsevier Ltd. All rights reserved.

  2. Nitrogen-removal performance and community structure of nitrifying bacteria under different aeration modes in an oxidation ditch.

    Science.gov (United States)

    Guo, Chang-Zi; Fu, Wei; Chen, Xue-Mei; Peng, Dang-Cong; Jin, Peng-Kang

    2013-07-01

    Oxidation-ditch operation modes were simulated using sequencing batch reactors (SBRs) with alternate stirring and aerating. The nitrogen-removal efficiencies and nitrifying characteristics of two aeration modes, point aeration and step aeration, were investigated. Under the same air-supply capacity, oxygen dissolved more efficiently in the system with point aeration, forming a larger aerobic zone. The nitrifying effects were similar in point aeration and step aeration, where the average removal efficiencies of NH4(+) N were 98% and 96%, respectively. When the proportion of anoxic and oxic zones was 1, the average removal efficiencies of total nitrogen (TN) were 45% and 66% under point aeration and step aeration, respectively. Step aeration was more beneficial to both anoxic denitrification and simultaneous nitrification and denitrification (SND). The maximum specific ammonia-uptake rates (AUR) of point aeration and step aeration were 4.7 and 4.9 mg NH4(+)/(gMLVSS h), respectively, while the maximum specific nitrite-uptake rates (NUR) of the two systems were 7.4 and 5.3 mg NO2(-)-N/(gMLVSS h), respectively. The proportions of ammonia-oxidizing bacteria (AOB) to all bacteria were 5.1% under point aeration and 7.0% under step aeration, and the proportions of nitrite-oxidizing bacteria (NOB) reached 6.5% and 9.0% under point and step aeration, respectively. The dominant genera of AOB and NOB were Nitrosococcus and Nitrospira, which accounted for 90% and 91%, respectively, under point aeration, and the diversity of nitrifying bacteria was lower than under step aeration. Point aeration was selective of nitrifying bacteria. The abundance of NOB was greater than that of AOB in both of the operation modes, and complete transformation of NH4(+) N to NO3(-)-N was observed without NO2(-)-N accumulation. Copyright © 2013 Elsevier Ltd. All rights reserved.

  3. Antimicrobial activity of metal oxide nanoparticles against Gram-positive and Gram-negative bacteria: a comparative study

    Directory of Open Access Journals (Sweden)

    Azam A

    2012-12-01

    Full Text Available Ameer Azam,1,2 Arham S Ahmed,2 Mohammad Oves,3 Mohammad S Khan,3 Sami S Habib,1 Adnan Memic11Centre of Nanotechnology, King Abdulaziz University, Jeddah, Saudi Arabia; 2Centre of Excellence in Materials Science (Nanomaterials, 3Department of Agricultural Microbiology, Aligarh Muslim University, Aligarh, IndiaBackground: Nanomaterials have unique properties compared to their bulk counterparts. For this reason, nanotechnology has attracted a great deal of attention from the scientific community. Metal oxide nanomaterials like ZnO and CuO have been used industrially for several purposes, including cosmetics, paints, plastics, and textiles. A common feature that these nanoparticles exhibit is their antimicrobial behavior against pathogenic bacteria. In this report, we demonstrate the antimicrobial activity of ZnO, CuO, and Fe2O3 nanoparticles against Gram-positive and Gram-negative bacteria.Methods and results: Nanosized particles of three metal oxides (ZnO, CuO, and Fe2O3 were synthesized by a sol–gel combustion route and characterized by X-ray diffraction, Fourier-transform infrared spectroscopy, and transmission electron microscopy techniques. X-ray diffraction results confirmed the single-phase formation of all three nanomaterials. The particle sizes were observed to be 18, 22, and 28 nm for ZnO, CuO, and Fe2O3, respectively. We used these nanomaterials to evaluate their antibacterial activity against both Gram-negative (Escherichia coli and Pseudomonas aeruginosa and Gram-positive (Staphylococcus aureus and Bacillus subtilis bacteria.Conclusion: Among the three metal oxide nanomaterials, ZnO showed greatest antimicrobial activity against both Gram-positive and Gram-negative bacteria used in this study. It was observed that ZnO nanoparticles have excellent bactericidal potential, while Fe2O3 nanoparticles exhibited the least bactericidal activity. The order of antibacterial activity was demonstrated to be the following: ZnO > CuO > Fe2O3

  4. Epigenetic alterations of sedimentary rocks at deposits

    International Nuclear Information System (INIS)

    Komarova, G.V.; Kondrat'eva, I.A.; Zelenova, O.I.

    1980-01-01

    Notions are explained, and technique for studying epigenetic alterations of sedimentary rocks at uranium deposits is described. Main types of epigenetic transformations and their mineralogic-geochemical characteristics are considered. Rock alterations, accompanying uranium mineralization, can be related to 2 types: oxidation and reduction. The main mineralogic-geochemical property of oxidation transformations is epigenetic limonitization. Stratal limonitization in primary grey-coloured terrigenic rocks and in epigenetically reduced (pyritized) rocks, as well as in rock, subjected to epigenetic gleying, are characterized. Reduction type of epigenetic transformations is subdivided into sulphidic and non-sulphidic (gley) subtypes. Sulphidic transformations in grey-coloured terrigenic rocks with organic substance of carbonic row, in rocks, containing organic substance of oil row, sulphide transformations of sedimentary rocks, as well as gley transformations, are considered

  5. Oxidation of methane in biotrickling filters inoculated with methanotrophic bacteria.

    Science.gov (United States)

    Cáceres, Manuel; Dorado, Antonio D; Gentina, Juan C; Aroca, Germán

    2017-11-01

    The oxidation of methane (CH 4 ) using biofilters has been proposed as an alternative to mitigate anthropogenic greenhouse gas emissions with a low concentration of CH 4 that cannot be used as a source of energy. However, conventional biofilters utilize organic packing materials that have a short lifespan, clogging problems, and are commonly inoculated with non-specific microorganisms leading to unpredictable CH 4 elimination capacities (EC) and removal efficiencies (RE). The main objective of this work was to characterize the oxidation of CH 4 in two biotrickling filters (BTFs) packed with polyethylene rings and inoculated with two methanotrophic bacteria, Methylomicrobium album and Methylocystis sp., in order to determine EC and CO 2 production (pCO 2 ) when using a specific inoculum. The repeatability of the results in both BTFs was determined when they operated at the same inlet load of CH 4 . A dynamic mathematical model that describes the CH 4 abatement in the BTFs was developed and validated using mass transfer and kinetic parameters estimated independently. The results showed that EC and pCO 2 of the BTFs are not identical but very similar for all the conditions tested. The use of specific inoculum has shown a faster startup and higher EC per unit area (0.019 gCH 4  m -2  h -1 ) in comparison to most of the previous studies at the same CH 4 load rate (23.2 gCH 4  m -3  h -1 ). Global mass balance showed that the maximum reduction of CO 2 equivalents was 98.5 gCO 2eq  m -3  h -1 . The developed model satisfactorily described CH 4 abatement in BTFs for a wide range of conditions.

  6. Effect of non-Legionellaceae bacteria on the multiplication of Legionella pneumophila in potable water.

    OpenAIRE

    Wadowsky, R M; Yee, R B

    1985-01-01

    A naturally occurring suspension of Legionella pneumophila and associated microbiota contained three unidentified non-Legionellaceae bacteria which supported satellite growth of a subculture of L. pneumophila on an L-cysteine-deficient medium and another bacterium which did not support growth of the subculture. Washed suspensions containing 10(3), 10(5), 10(7), or 10(8) CFU of a mixture of isolates of these non-Legionellaceae bacteria failed to support the multiplication of an isolate of agar...

  7. Synthesis and luminescence of graphene-nano calcium sulphide composite

    International Nuclear Information System (INIS)

    Sharma, Geeta; Patil, K.R.; Gosavi, S.W.

    2014-01-01

    Graphene-nanocrystalline calcium sulphide has been synthesized using in-situ reduction of calcium salt and graphene oxide. Graphene oxide was prepared using Hummer's method. Surface morphology and crystal structure of samples were observed by transmission electron microscopy (TEM) and X-Ray diffraction (XRD). Ultra thin graphene and graphene oxide sheets with size ranging between tens to several hundreds of square nanometers are observed in TEM images. The TEM micrographs of G-CaS show that CaS particles are embedded in graphene sheets and the average particle size of CaS particles in the composite is less than 50 nm. The reduction in the intensity of various functional groups in FTIR spectrum also confirms the formation of graphene. The UV-Visible spectra of CaS shows absorption peak at 220 nm with a small shoulder at 250 nm whereas in G-CaS 220 nm absorption peak has reduced intensity and the shoulder at 250 nm has now shifted to 270 nm due to modification in the defect structure of CaS by graphene. CaS and G-CaS shows photoluminescence emission at 470 nm (λ exc . = 375 nm) and 440 nm (λ exc . = 350 nm) respectively, however emission intensity of G-CaS is relatively lower than CaS. Although the emission intensity is found to be lower than CaS, addition of CaS to graphene in G-CaS complex has made graphene luminescent. XPS spectra also indicate reduction of various oxygen containing functional groups in highly reduced graphene oxide and G-CaS. - Highlights: • G-CaS was synthesized using in situ reduction of calcium salt and graphene oxide. • Samples were characterized by XRD, TEM, PL, FTIR, XPS, Raman Spectroscopy. • TEM of GCaS show CaS particles having size less than 50 nm are embedded in graphene. • G-CaS shows PL emission at 440 nm when excited with 350 nm. • PL emission intensity in case of G-CaS is lower than CaS but it is luminescent

  8. Sulphur bacteria mediated formation of Palaeoproterozoic phosphorites

    Science.gov (United States)

    Joosu, Lauri; Lepland, Aivo; Kirsimäe, Kalle

    2014-05-01

    Modern phosphorite formation is typically associated with high productivity in upwelling areas where apatite (Ca-phosphate) precipitation is mediated by sulphur oxidising bacteria [1]. They inhabit the oxic/anoxic interface within the upper few centimetres of sediment column, accumulating phosphate in their cells under oxic conditions and releasing it rapidly when conditions become anoxic. Sulphur bacteria are known to live in close association with a consortium of anaerobic methane oxidising archaea and syntrophic sulphate-reducing bacteria. Paleoproterozoic, c. 2.0 Ga Zaonega Formation in Karelia, Russia contains several P-rich intervals in the upper part of 1500 m thick succession of organic-rich sedimentary rocks interlayered with mafic tuffs and lavas. Apatite in these P-rich intervals forms impure laminae, lenses and round-oval nodules which diameters typically range from 300 to 1000 μm. Individual apatite particles in P-rich laminae and nodules commonly occur as cylinders that are 1-8 μm long and have diameters of 0.5-4 μm. Cross-sections of best preserved cylindrical apatite particles reveal a thin outer rim whereas the internal parts consist of small anhedral elongated crystallites, intergrown with carbonaceous material. During recrystallization the outer rim thickens towards interior and cylinders may attain hexagonal crystal habit, but their size and shape remains largely unchanged [2]. The sizes of Zaonega nodules are similar to giant sulphide-oxidising bacteria known from modern and ancient settings [3, 4]. Individual apatite cylinders and aggregates have shapes and sizes similar to the methanotrophic archaea that inhabit microbial mats in modern seep/vent areas where they operate in close associations with sulphur-oxidising microbial communities [5]. Seep/vent influence during the Zaonega phosphogenesis is indicated by variable, though positive Eu anomaly, expected in magmatically active sedimentary environment experiencing several lava flows

  9. [Isolation and identification of hydrogen-oxidizing bacteria producing 1-aminocyclopropane-1-carboxylate deaminase and the determination of enzymatic activity].

    Science.gov (United States)

    Fu, Bo; Wang, Weiwei; Tang, Ming; Chen, Xingdu

    2009-03-01

    We used Medicago sativa rhizosphere in Shaanxi province of China to isolate and identify hydrogen-oxidizing bacteria that produced ACC (1-aminocyclopropane-1-carboxylate) deaminase, and then studied the mechanism why they can promote the growth of plants. Hydrogen-oxidizing bacteria were isolated by gas-cycle incubation system. We studied the morphological character, physiological characteristics, 16S rDNA sequence analysis and built the phylogenic tree. Thin layer chromatography was used to isolate the strain that produced ACC deaminase. Ninhydrin reaction was used to test the enzyme activity. In total 37 strains were isolated, 8 of which could oxidize H2 strongly and grow chemolithoautotrophically. We initially identified them as hydrogen-oxidizing bacteria. Only strain WMQ-7 produced ACC deaminase among these 8 strains. Morphological and physiological characteristics analysis showed that strain WMQ-7 was essentially consistent with Pseudomonas putida. The 16S rDNA sequence analysis (GenBank accession number EU807744) suggested that strain WMQ-7 was clustered together with Pseudomonas putida in phylogenetic tree, with the sequence identity of 99%. Based on all these results, strain WMQ-7 was identified as Pseudomonas putida. The enzyme activity of strain WMQ-7 was 0.671 U/microg. A strain producing ACC deaminase was identified and tested.

  10. Cadmium sulphide thin film for application in gamma radiation ...

    African Journals Online (AJOL)

    Cadmium Sulphide (CdS) thin film was prepared using pyrolytic spraying technique and then irradiated at varied gamma dosage. The CdS thin film absorption before gamma irradiation was 0.6497. Absorbed doses were computed using standard equation established for an integrating dosimeter. The plot of absorbed dose ...

  11. Bacteria Provide Cleanup of Oil Spills, Wastewater

    Science.gov (United States)

    2010-01-01

    Through Small Business Innovation Research (SBIR) contracts with Marshall Space Flight Center, Micro-Bac International Inc., of Round Rock, Texas, developed a phototrophic cell for water purification in space. Inside the cell: millions of photosynthetic bacteria. Micro-Bac proceeded to commercialize the bacterial formulation it developed for the SBIR project. The formulation is now used for the remediation of wastewater systems and waste from livestock farms and food manufacturers. Strains of the SBIR-derived bacteria also feature in microbial solutions that treat environmentally damaging oil spills, such as that resulting from the catastrophic 2010 Deepwater Horizon oil rig explosion in the Gulf of Mexico.

  12. Potential coupling effects of ammonia-oxidizing and anaerobic ammonium-oxidizing bacteria on completely autotrophic nitrogen removal over nitrite biofilm formation induced by the second messenger cyclic diguanylate.

    Science.gov (United States)

    Wang, Chao; Liu, Sitong; Xu, Xiaochen; Zhao, Chuanqi; Yang, Fenglin; Wang, Dong

    2017-05-01

    The objective of this study was to investigate the influence of extracellular polymeric substance (EPS) on the coupling effects between ammonia-oxidizing bacteria (AOB) and anaerobic ammonium-oxidizing (anammox) bacteria for the completely autotrophic nitrogen removal over nitrite (CANON) biofilm formation in a moving bed biofilm reactor (MBBR). Analysis of the quantity of EPS and cyclic diguanylate (c-di-GMP) confirmed that the contents of polysaccharides and c-di-GMP were correlated in the AOB sludge, anammox sludge, and CANON biofilm. The anammox sludge secreted more EPS (especially polysaccharides) than AOB with a markedly higher c-di-GMP content, which could be used by the bacteria to regulate the synthesis of exopolysaccharides that are ultimately used as a fixation matrix, for the adhesion of biomass. Indeed, increased intracellular c-di-GMP concentrations in the anammox sludge enhanced the regulation of polysaccharides to promote the adhesion of AOB and formation of the CANON biofilm. Overall, the results of this study provide new comprehensive information regarding the coupling effects of AOB and anammox bacteria for the nitrogen removal process.

  13. Photosynthetic behaviour of Arabidopsis thaliana (Pa-1 accession ...

    African Journals Online (AJOL)

    The growth reduction observed in many plants caused by salinity is often associated with a decrease in their photosynthetic capacity. This effect could be associated with the partial stomatal closure and/or the non-stomatal limitation which involves the decrease in ribulose-1,5-bisphosphate carboxylase oxygenase ...

  14. TEM analysis of fine sulphides dissolution and precipitation in steel

    International Nuclear Information System (INIS)

    Garbarz, B.; Marcisz, J.; Wojtas, J.

    2003-01-01

    Results of transmission electron microscopy (TEM) investigation of morphology, size distribution and chemistry of nano-inclusions formed in 4 mm thick laboratory steel ingots in as-cast condition and after heat treatment are reported. The investigated steel contained 0.11-0.14 C, 0.6 Mn, 0.25 Si, 0.22 Cu, 0.025-0.037 S (wt.%), and 80-115 ppm O and solidified at an average cooling rate of 250 K s -1 . In the as-cast specimens most nano-inclusions had a diameter in the range 10-100 nm with an average size of 30 nm. They were identified by microanalysis in thin foils as sulphides: MnS, (Mn,Cu)S, CuS and Cu 2 S. After a solution treatment of the thin ingots the re-precipitation of nano-sulphides was investigated

  15. Comparison of Oxidation Kinetics of Nitrite-Oxidizing Bacteria: Nitrite Availability as a Key Factor in Niche Differentiation

    Science.gov (United States)

    Nowka, Boris; Daims, Holger

    2014-01-01

    Nitrification has an immense impact on nitrogen cycling in natural ecosystems and in wastewater treatment plants. Mathematical models function as tools to capture the complexity of these biological systems, but kinetic parameters especially of nitrite-oxidizing bacteria (NOB) are lacking because of a limited number of pure cultures until recently. In this study, we compared the nitrite oxidation kinetics of six pure cultures and one enrichment culture representing three genera of NOB (Nitrobacter, Nitrospira, Nitrotoga). With half-saturation constants (Km) between 9 and 27 μM nitrite, Nitrospira bacteria are adapted to live under significant substrate limitation. Nitrobacter showed a wide range of lower substrate affinities, with Km values between 49 and 544 μM nitrite. However, the advantage of Nitrobacter emerged under excess nitrite supply, sustaining high maximum specific activities (Vmax) of 64 to 164 μmol nitrite/mg protein/h, contrary to the lower activities of Nitrospira of 18 to 48 μmol nitrite/mg protein/h. The Vmax (26 μmol nitrite/mg protein/h) and Km (58 μM nitrite) of “Candidatus Nitrotoga arctica” measured at a low temperature of 17°C suggest that Nitrotoga can advantageously compete with other NOB, especially in cold habitats. The kinetic parameters determined represent improved basis values for nitrifying models and will support predictions of community structure and nitrification rates in natural and engineered ecosystems. PMID:25398863

  16. Genotype-Dependent Effect of Exogenous Nitric Oxide on Cd-induced Changes in Antioxidative Metabolism, Ultrastructure, and Photosynthetic Performance in Barley Seedlings (Hordeum vulgare)

    DEFF Research Database (Denmark)

    Chen, Fei; Wang, Fang; Sun, Hongyan

    2010-01-01

    M Cd increased the accumulation of O2•-, H2O2, and malondialdehyde (MDA) but reduced plant height, chlorophyll content, net photosynthetic rate (P n), and biomass, with a much more severe response in the Cd-sensitive genotype. Antioxidant enzyme activities increased significantly under Cd stress......A greenhouse hydroponic experiment was performed using Cd-sensitive (cv. Dong 17) and Cd-tolerant (Weisuobuzhi) barley seedlings to evaluate how different genotypes responded to cadmium (Cd) toxicity in the presence of sodium nitroprusside (SNP), a nitric oxide (NO) donor. Results showed that 5 μ...... in the roots of the tolerant genotype, whereas in leaves of the sensitive genotype, superoxide dismutase (SOD) and ascorbate peroxide (APX), especially cytosol ascorbate peroxidase (cAPX), decreased after 5-15 days Cd exposure. Moreover, Cd induces NO synthesis by stimulating nitrate reductase and nitric oxide...

  17. A new laboratory cultivation of Paramecium bursaria using non-pathogenic bacteria strains.

    Science.gov (United States)

    Bator, Tomasz

    2010-01-01

    In most studies dealing with the laboratory cultivation of paramecia (Paramecium bursaria), Klebsiella pneumoniae bacteria are used to inoculate the medium. However, Klebsiella pneumoniae is a typical pathogen, and its use is always associated with a risk of infection. The aim of the present research was to examine non-pathogenic bacteria strains as components of the medium for Paramecium bursaria. The paramecia were incubated on lettuce infusions bacterized with different bacteria strains: Bacillus subtilis DSM 10, Bacillus megaterium DSM 32, Escherichia coli DSM 498, Micrococcus luteus DSM 348. A strain derived from the natural habitat of Paramecium bursaria was used as the control one. Experiments were conducted under constant light and in the dark. Paramecia cells were counted under a stereomicroscope on consecutive days of incubation. The obtained results show that the most intensive growth of Paramecium bursaria occurs in the presence of Escherichia coli DSM 498. The use of this strain as a component of the medium allows one to obtain a high number of ciliates regardless of the light conditions. It can be concluded that the Paramecium bursaria cultivation procedure can be modified by using the non-pathogenic bacteria strain Escherichia coli DSM 498 instead of Klebsiella pneumoniae.

  18. Spatial interaction of archaeal ammonia-oxidizers and nitrite-oxidizing bacteria in an unfertilized grassland soil

    Directory of Open Access Journals (Sweden)

    Barbara eStempfhuber

    2016-01-01

    Full Text Available Interrelated successive transformation steps of nitrification are performed by distinct microbial groups – the ammonia-oxidizers, comprising ammonia-oxidizing archaea (AOA and bacteria (AOB, and nitrite-oxidizers such as Nitrobacter and Nitrospira, which are the dominant genera in the investigated soils. Hence, not only their presence and activity in the investigated habitat is required for nitrification, but also their temporal and spatial interactions. To demonstrate the interdependence of both groups and to address factors promoting putative niche differentiation within each group, temporal and spatial changes in nitrifying organisms were monitored in an unfertilized grassland site over an entire vegetation period at the plot scale of 10 m². Nitrifying organisms were assessed by measuring the abundance of marker genes (amoA for AOA and AOB, nxrA for Nitrobacter, 16S rRNA gene for Nitrospira selected for the respective sub-processes. A positive correlation between numerically dominant AOA and Nitrospira, and their co-occurrence at the same spatial scale in August and October, suggests that the nitrification process is predominantly performed by these groups and is restricted to a limited timeframe. Amongst nitrite-oxidizers, niche differentiation was evident in observed seasonally varying patterns of co-occurrence and spatial separation. While their distributions were most likely driven by substrate concentrations, oxygen availability may also have played a role under substrate-limited conditions. Phylogenetic analysis revealed temporal shifts in Nitrospira community composition with an increasing relative abundance of OTU03 assigned to sublineage V from August onwards, indicating its important role in nitrite oxidation.

  19. Life on the energetic edge: Iron oxidation by circumneutral lithotrophic bacteria in the wetland plant rhizosphere

    Science.gov (United States)

    Neubauer, S. C.; Emerson, D.; Megonigal, J. P.; Weiss, J. V.

    2002-05-01

    We have discovered a phylogenetically and genotypically coherent group of obligately lithotrophic Fe-oxidizing bacteria that grow at neutral pH and are globally distributed in a range of habitats, from the rhizosphere of freshwater wetlands to deep-sea hydrothermal vents. We have initiated bioreactor studies using pure cultures of these organisms to determine the significance of microbial Fe(II) oxidation at circumneutral pH and identify the biotic and abiotic variables that affect the partitioning between microbial and chemical oxidation. These studies have focused on strain BrT, which was isolated from an iron oxide precipitate in rhizosphere of a wetland plant. In one set of experiments, Fe(II) oxidation rates were measured before and after cultures of strain BrT were poisoned with sodium azide. These experiments indicated that 18 to 53 % of total iron oxidation was due to microbial metabolism. In a second set of experiments, Fe(II) was constantly added to bioreactors inoculated with live cells, killed cells, or no cells. A statistical model fit to the experimental data demonstrated that metabolic Fe(II) oxidation accounted for up to 62 % of total oxidation. Total Fe(II) oxidation rates in these experiments were strongly limited by the rate of Fe(II) delivery to the system, and were also influenced by O2 and total iron concentrations. Additionally, the model suggested that the microbes inhibited rates of abiotic Fe(II) oxidation, perhaps by binding Fe(II) to bacterial exopolymers. The net effect of strain BrT was to accelerate total oxidation rates by up to 18 % versus cell-free treatments. Using two independent techniques, we demonstrated that strain BrT actively metabolizes Fe(II) and can account for up to 50 to 60 % of total Fe(II) oxidation in laboratory cultures. These results suggest that neutrophilic Fe(II)-oxidizing bacteria may compete for limited O2 in the rhizosphere and influence the biogeochemistry of other elements including carbon, phosphorus, and

  20. Energy transfer and clustering of photosynthetic light-harvesting complexes in reconstituted lipid membranes

    International Nuclear Information System (INIS)

    Dewa, Takehisa; Sumino, Ayumi; Watanabe, Natsuko; Noji, Tomoyasu; Nango, Mamoru

    2013-01-01

    Highlights: ► Photosynthetic light-harvesting complexes were reconstituted into lipid membranes. ► Energy transfers between light-harvesting complexes were examined. ► Atomic force microscopy indicated cluster formation of light-harvesting complexes. ► Efficient energy transfer was observed for the clustered complexes in the membranes. - Abstract: In purple photosynthetic bacteria, light-harvesting complex 2 (LH2) and light harvesting/reaction centre core complex (LH1-RC) play the key roles of capturing and transferring light energy and subsequent charge separation. These photosynthetic apparatuses form a supramolecular assembly; however, how the assembly influences the efficiency of energy conversion is not yet clear. We addressed this issue by evaluating the energy transfer in reconstituted photosynthetic protein complexes LH2 and LH1-RC and studying the structures and the membrane environment of the LH2/LH1-RC assemblies, which had been embedded into various lipid bilayers. Thus, LH2 and LH1-RC from Rhodopseudomonas palustris 2.1.6 were reconstituted in phosphatidylglycerol (PG), phosphatidylcholine (PC), and phosphatidylethanolamine (PE)/PG/cardiolipin (CL). Efficient energy transfer from LH2 to LH1-RC was observed in the PC and PE/PG/CL membranes. Atomic force microscopy revealed that LH2 and LH1-RC were heterogeneously distributed to form clusters in the PC and PE/PG/CL membranes. The results indicated that the phospholipid species influenced the cluster formation of LH2 and LH1-RC as well as the energy transfer efficiency

  1. Energy transfer and clustering of photosynthetic light-harvesting complexes in reconstituted lipid membranes

    Energy Technology Data Exchange (ETDEWEB)

    Dewa, Takehisa, E-mail: takedewa@nitech.ac.jp [Department of Frontier Materials, Graduate School of Engineering, Nagoya Institute of Technology, Gokiso-cho, Showa-ku, Nagoya 466-8555 (Japan); Japan Science and Technology, PRESTO, 4-1-8 Honcho Kawaguchi, Saitama 332-0012 (Japan); Sumino, Ayumi; Watanabe, Natsuko; Noji, Tomoyasu [Department of Frontier Materials, Graduate School of Engineering, Nagoya Institute of Technology, Gokiso-cho, Showa-ku, Nagoya 466-8555 (Japan); Nango, Mamoru, E-mail: nango@nitech.ac.jp [Department of Frontier Materials, Graduate School of Engineering, Nagoya Institute of Technology, Gokiso-cho, Showa-ku, Nagoya 466-8555 (Japan)

    2013-06-20

    Highlights: ► Photosynthetic light-harvesting complexes were reconstituted into lipid membranes. ► Energy transfers between light-harvesting complexes were examined. ► Atomic force microscopy indicated cluster formation of light-harvesting complexes. ► Efficient energy transfer was observed for the clustered complexes in the membranes. - Abstract: In purple photosynthetic bacteria, light-harvesting complex 2 (LH2) and light harvesting/reaction centre core complex (LH1-RC) play the key roles of capturing and transferring light energy and subsequent charge separation. These photosynthetic apparatuses form a supramolecular assembly; however, how the assembly influences the efficiency of energy conversion is not yet clear. We addressed this issue by evaluating the energy transfer in reconstituted photosynthetic protein complexes LH2 and LH1-RC and studying the structures and the membrane environment of the LH2/LH1-RC assemblies, which had been embedded into various lipid bilayers. Thus, LH2 and LH1-RC from Rhodopseudomonas palustris 2.1.6 were reconstituted in phosphatidylglycerol (PG), phosphatidylcholine (PC), and phosphatidylethanolamine (PE)/PG/cardiolipin (CL). Efficient energy transfer from LH2 to LH1-RC was observed in the PC and PE/PG/CL membranes. Atomic force microscopy revealed that LH2 and LH1-RC were heterogeneously distributed to form clusters in the PC and PE/PG/CL membranes. The results indicated that the phospholipid species influenced the cluster formation of LH2 and LH1-RC as well as the energy transfer efficiency.

  2. Oxidative stress caused by the use of preemergent herbicides in rice crops

    Directory of Open Access Journals (Sweden)

    Ana Claudia Langaro

    Full Text Available ABSTRACT Among the methods of weed control, stands out chemical control. However, even selective, herbicides can trigger the production of reactive species of oxygen and cause oxidative stress. The aim of the study was to evaluate changes in photosynthetic parameters, oxidative damage, antioxidant enzyme activity and altered metabolism of rice plants after applying pre-emergent herbicides. The experiment was conducted in a greenhouse and herbicides used were oxadiazon, pendimethalin and oxyfluorfen, beyond the control without herbicide. There was a reduction of photosynthetic rate and efficiency of carboxylation, compared to the control, when applied herbicides oxyfluorfen and pendimethalin. The major lipid peroxidation and proline accumulation was observed for the herbicide oxyfluorfen. The oxyfluorfen and oxadiazon herbicides also resulted in increased activity of superoxide dismutase, compared to control. When evaluated ascorbate peroxidase activity, there was a higher enzyme activity in plants treated with oxadiazon and pendimethalin. Even selective herbicides registered for weed control in rice crops cause phytotoxicity, reduce height and alter the metabolism of plants, generating reactive oxygen species, which activate enzymatic and non-enzymatic defense systems and result in the degradation of photosynthetic pigments and in reduced protein content.

  3. Constructing inverse V-type TiO{sub 2}-based photocatalyst via bio-template approach to enhance the photosynthetic water oxidation

    Energy Technology Data Exchange (ETDEWEB)

    Jiang, Jinghui; Zhou, Han; Ding, Jian; Zhang, Fan; Fan, Tongxiang, E-mail: txfan@sjtu.edu.cn; Zhang, Di

    2015-08-30

    Graphical abstract: Inverse V-type TiO{sub 2}-based photocatalyst was synthesized by using cross-linked titanium precursor to duplicate bio-template. - Highlights: • Cross-linked titanium precursor can facilitate an accurate duplication of templates. • In situ deposition of Ag{sup 0} from AgBr can maintain the completeness of surface structure. • Perfect inverse V-type Ag{sup 0}/TiO{sub 2} can achieve efficient water oxidation. - Abstract: Bio-template approach was employed to construct inverse V-type TiO{sub 2}-based photocatalyst with well distributed AgBr in TiO{sub 2} matrix by making dead Troides Helena wings with inverse V-type scales as the template. A cross-linked titanium precursor with homogenous hydrolytic rate, good liquidity, and low viscosity was employed to facilitate a perfect duplication of the template and the dispersion of AgBr based on appropriate pretreatment of the template by alkali and acid. The as-synthesized inverse V-type TiO{sub 2}/AgBr can be turned into inverse V-type TiO{sub 2}/Ag{sup 0} from AgBr photolysis during photocatalysis to achieve in situ deposition of Ag{sup 0} in TiO{sub 2} matrix, by this approach, to avoid the deformation of surface microstructure inherited from the template. The result showed that the cooperation of perfect inverse V-type structure and the well distributed TiO{sub 2}/Ag{sup 0} microstructures can efficiently boost the photosynthetic water oxidation compared to non-inverse V-type TiO{sub 2}/Ag{sup 0} and TiO{sub 2}/Ag{sup 0} without using template. The anti-reflection function of inverse V-type structure and the plasmatic effect of Ag{sup 0} might be able to account for the enhanced photon capture and efficient photoelectric conversion.

  4. The bioactivation procedure for increasing the sulphate-reducing bacteria in a UASB reactor

    Directory of Open Access Journals (Sweden)

    M. M. M. Gonçalves

    2005-12-01

    Full Text Available Bioactivation, a procedure to obtain anaerobic sulphidogenic sludge, was developed in order to increase sulphate reduction and, consequently, sulphide production to remove metals from effluents. This procedure, in which the source of carbon/energy (lactate is gradually replaced, consisted of three operational conditions. It was observed that bioactivation took six months so there was a 100-fold increase in the population of sulphate-reducing bacteria estimated by the most-probable-number (MPN when molasses was employed as a new source.

  5. Biochemical factors affecting the quantum efficiency of hydrogen production by membranes of green photosynthetic bacteria

    Energy Technology Data Exchange (ETDEWEB)

    Bernstein, J.D.; Olson, J.M.

    1981-01-01

    Photohydrogen production, 200-700 ..mu..mol H/sub 2/ h/sup -1/ (mg bacteriochlorophyll a)/sup -1/ has been obtained in a system containing unit membrane vesicles (Complex I) from the green photosynthetic bacterium Chlorobium limicola f. thiosulfatophilum, ascorbate, N,N,N',N'-tetramethyl-p-phenylenediamine, dithioerythritol, an oxygen scavenging mixture, either methyl viologen (MV) or clostridial ferredoxin (CPS Fd) as electron carrier, and either CPS hydrogenase or platinum asbestos as catalyst. All components are necessary for maximum activity, and spinach Fd cannot be substituted for CPS Fd. Higher rates of photohydrogen production are obtained using MV or CPS Fd with hydrogenase than with MV and Pt asbestos. The highest quantum efficiencies (7-10% at 0.2-0.9 mW absorbed light and over 20% at lower light) were obtained with CPS Fd, hydrogenase and non-saturating 812 nm light. With saturating white light, however, rates of photohydrogen production varied relatively little among the various combinations of electron carrier and catalyst tested. The reaction rate is unaffected by 0.03% Triton X-100, and is insensitive to treatment with antimycin a or m-chloro-carbonyl cyanide phenylhydrazone.This indicates that neither electron flow through an endogenous cyclic chain, nor maintenance of a proton gradient are involved in this process.

  6. Synthesis of TOPO-capped Nanocrystals of Copper Sulphide from a ...

    African Journals Online (AJOL)

    Nearly mono-dispersed TOPO-capped copper sulphide nanocrystals of ca. 4.5 nm (diameter) have been ... aqueous sols,1 monolayers,2 bilayer lipid membranes,3,4 LB films,5 ... addition of an excess of methanol to the yellow solution a thin.

  7. Environmental evaluation of coexistence of denitrifying anaerobic methane-oxidizing archaea and bacteria in a paddy field.

    Science.gov (United States)

    Ding, Jing; Fu, Liang; Ding, Zhao-Wei; Lu, Yong-Ze; Cheng, Shuk H; Zeng, Raymond J

    2016-01-01

    The nitrate-dependent denitrifying anaerobic methane oxidation (DAMO) process, which is metabolized together by anaerobic methanotrophic archaea and NC10 phylum bacteria, is expected to be important for the global carbon and nitrogen cycles. However, there are little studies about the existence of this process and the functional microbes in environments. Therefore, the coexistence of DAMO archaea and bacteria in a paddy field was evaluated in this study. Next-generation sequencing showed that the two orders, Methanosarcinales and Nitrospirales, to which DAMO archaea and DAMO bacteria belong, were detected in the four soil samples. Then the in vitro experiments demonstrated both of nitrite- and nitrate-dependent DAMO activities, which confirmed the coexistence of DAMO archaea and DAMO bacteria. It was the first report about the coexistence of DAMO archaea and bacteria in a paddy field. Furthermore, anammox bacteria were detected in two of the four samples. The in vitro experiments did not show anammox activity in the initial period but showed low anammox activity after 20 days' enrichment. These results implicated that anammox bacteria may coexist with DAMO microorganisms in this field, but at a very low percentage.

  8. AN APPLICATION OF FLOW INJECTION ANALYSIS WITH GAS DIFFUSION AND SPECTROPHOTOMETRIC DETECTION FOR THE MONITORING OF DISSOLVED SULPHIDE CONCENTRATION IN ENVIRONMENTAL SAMPLES

    Directory of Open Access Journals (Sweden)

    Malwina Cykowska

    2014-10-01

    Full Text Available The monitoring of the concentration of sulphide is very important from the environment point of view because of high toxicity of hydrogen sulphide. What is more hydrogen sulphide is an important pollution indicator. In many cases the determination of sulphide is very difficult due to complicated matrix of some environmental samples, which causes that most analytical methods cannot be used. Flow injection analysis allows to avoid matrix problem what makes it suitable for a wide range of applications in analytical laboratories. In this paper determination of dissolved sulphide in environmental samples by gas-diffusion flow injection analysis with spectrophotometric detection was presented. Used gas-diffusion separation ensures the elimination of interferences caused by sample matrix and gives the ability of determination of sulphides in coloured and turbid samples. Studies to optimize the measurement conditions and to determine the value of the validation parameters (e.g. limit of detection, limit of quantification, precision, accuracy were carried out. Obtained results confirm the usefulness of the method for monitoring the concentration of dissolved sulphides in water and waste water. Full automation and work in a closed system greatly reduces time of analysis, minimizes consumption of sample and reagents and increases safety of analyst’s work.

  9. Synthesis and Fungicidal activity of some sulphide derivatives of O-Ethyl-N-substituted phenylcarbamates

    International Nuclear Information System (INIS)

    Imeokparia, F.A.

    2006-01-01

    Monosulphides of O-ethyl-N-substituted phenylcarbamates were prepared by the reaction between O-ethyl-N-substituted phenylcarbamates and sulphur dichloride, while the corresponding disulphides were prepared by the reaction between O-ethyl-N-substituted phenylcarbamates and sulphur monochloride. The synthesized compounds were characterized by elemental analysis, thin layer chromatography (TLC), Fourier-transform infrared, and /sup 1/H and /sup 13/C nuclear magnetic resonance spectroscopic techniques. In vitro fungicidal assay of these sulphides against Fusarium oxysporum, Aspergillus niger, Aspergillus flavus and Rhizopus stolonifer showed that they had Greater fungicidal activity than their parent carbamates. The synthesized sulphides were more active towards A. Niger and A. flavus. Unlike the parent carbamates, the type of substituents attached to the aromatic nucleus of these sulphides had little or no effect on their fungicidal activity as there was insignificant variation in the fungicidal activity of the monosulphide and the disulphide derivatives of O-ethyl-N-substituted phenylcarbamates. (author)

  10. Modeling of nitrous oxide production by autotrophic ammonia-oxidizing bacteria with multiple production pathways.

    Science.gov (United States)

    Ni, Bing-Jie; Peng, Lai; Law, Yingyu; Guo, Jianhua; Yuan, Zhiguo

    2014-04-01

    Autotrophic ammonia oxidizing bacteria (AOB) have been recognized as a major contributor to N2O production in wastewater treatment systems. However, so far N2O models have been proposed based on a single N2O production pathway by AOB, and there is still a lack of effective approach for the integration of these models. In this work, an integrated mathematical model that considers multiple production pathways is developed to describe N2O production by AOB. The pathways considered include the nitrifier denitrification pathway (N2O as the final product of AOB denitrification with NO2(-) as the terminal electron acceptor) and the hydroxylamine (NH2OH) pathway (N2O as a byproduct of incomplete oxidation of NH2OH to NO2(-)). In this model, the oxidation and reduction processes are modeled separately, with intracellular electron carriers introduced to link the two types of processes. The model is calibrated and validated using experimental data obtained with two independent nitrifying cultures. The model satisfactorily describes the N2O data from both systems. The model also predicts shifts of the dominating pathway at various dissolved oxygen (DO) and nitrite levels, consistent with previous hypotheses. This unified model is expected to enhance our ability to predict N2O production by AOB in wastewater treatment systems under varying operational conditions.

  11. Oxidation of mine tailings from Rankin Inlet, Nunavut, at subzero temperatures

    Energy Technology Data Exchange (ETDEWEB)

    Meldrum, J. L.; Jamieson, H. E.; Dyke, L. D.

    2001-10-01

    An experiment was undertaken to determine if encapsulation in permafrost of acid-generating sulphidic tailings from a Ni-Cu mine on the shores of Hudson Bay in Nunavut will maintain the tailings and their saline pore water in a chemically inert state. The experiment involved collection of tailings material and pore water samples three years after burial, followed by long-term thermal monitoring. Tailings were studied at temperatures between +30 degrees C and -10 degrees C. Oxygen consumption was measured directly to determine the effect of low temperatures on oxidation rate. Significant oxidation was observed at +30 degrees C, which was substantially reduced at lower temperatures. At -10 degrees C oxygen consumption was below the detection limit. The highest measured oxygen flux correlated with a temperature increase of one degree C, which is consistent with exothermic sulphide oxidation reactions. The experiment showed that freezing in Rankin Inlet is progressing and tailings will be ice-bonded approximately 15 years after burial. 30 refs., 3 tabs. 6 figs.

  12. Influence of organics and silica on Fe(II) oxidation rates and cell-mineral aggregate formation by the green-sulfur Fe(II)-oxidizing bacterium Chlorobium ferrooxidans KoFox - Implications for Fe(II) oxidation in ancient oceans

    Science.gov (United States)

    Gauger, Tina; Byrne, James M.; Konhauser, Kurt O.; Obst, Martin; Crowe, Sean; Kappler, Andreas

    2016-06-01

    Most studies on microbial phototrophic Fe(II) oxidation (photoferrotrophy) have focused on purple bacteria, but recent evidence points to the importance of green-sulfur bacteria (GSB). Their recovery from modern ferruginous environments suggests that these photoferrotrophs can offer insights into how their ancient counterparts grew in Archean oceans at the time of banded iron formation (BIF) deposition. It is unknown, however, how Fe(II) oxidation rates, cell-mineral aggregate formation, and Fe-mineralogy vary under environmental conditions reminiscent of the geological past. To address this, we studied the Fe(II)-oxidizer Chlorobium ferrooxidans KoFox, a GSB living in co-culture with the heterotrophic Geospirillum strain KoFum. We investigated the mineralogy of Fe(III) metabolic products at low/high light intensity, and in the presence of dissolved silica and/or fumarate. Silica and fumarate influenced the crystallinity and particle size of the produced Fe(III) minerals. The presence of silica also enhanced Fe(II) oxidation rates, especially at high light intensities, potentially by lowering Fe(II)-toxicity to the cells. Electron microscopic imaging showed no encrustation of either KoFox or KoFum cells with Fe(III)-minerals, though weak associations were observed suggesting co-sedimentation of Fe(III) with at least some biomass via these aggregates, which could support diagenetic Fe(III)-reduction. Given that GSB are presumably one of the most ancient photosynthetic organisms, and pre-date cyanobacteria, our findings, on the one hand, strengthen arguments for photoferrotrophic activity as a likely mechanism for BIF deposition on a predominantly anoxic early Earth, but, on the other hand, also suggest that preservation of remnants of Fe(II)-oxidizing GSB as microfossils in the rock record is unlikely.

  13. Overlapping toxic effect of long term thallium exposure on white mustard (Sinapis alba L.) photosynthetic activity.

    Science.gov (United States)

    Mazur, Radosław; Sadowska, Monika; Kowalewska, Łucja; Abratowska, Agnieszka; Kalaji, Hazem M; Mostowska, Agnieszka; Garstka, Maciej; Krasnodębska-Ostręga, Beata

    2016-09-02

    photosynthetic complexes were responsible for disappearance of the chloroplast grana. Based on the presented results we postulate two phases of thallium toxicity on photosynthesis: the non-destructive phase at early stages of toxicant accumulation and the destructive phase that is restricted to the discolored leaf areas containing high toxicant content. There was no distinct border between the two phases of thallium toxicity in leaves and the degree of toxicity was proportional to the migration rate of the toxicant outside the vascular bundles. The three-fold (nearly linear) increase of Tl(I) concentration was observed in damaged tissue and the damage appears to be associated with the presence of the oxidized form of thallium - Tl(III).

  14. Determination of the reaction rate coefficient of sulphide mine tailings deposited under water.

    Science.gov (United States)

    Awoh, Akué Sylvette; Mbonimpa, Mamert; Bussière, Bruno

    2013-10-15

    The efficiency of a water cover to limit dissolved oxygen (DO) availability to underlying acid-generating mine tailings can be assessed by calculating the DO flux at the tailings-water interface. Fick's equations, which are generally used to calculate this flux, require knowing the effective DO diffusion coefficient (Dw) and the reaction (consumption) rate coefficient (Kr) of the tailings, or the DO concentration profile. Whereas Dw can be accurately estimated, few studies have measured the parameter Kr for submerged sulphide tailings. The objective of this study was to determine Kr for underwater sulphide tailings in a laboratory experiment. Samples of sulphide mine tailings (an approximately 6 cm layer) were placed in a cell under a water cover (approximately 2 cm) maintained at constant DO concentration. Two tailings were studied: TA1 with high sulphide content (83% pyrite) and TA2 with low sulphide content (2.8% pyrite). DO concentration was measured with a microelectrode at various depths above and below the tailings-water interface at 1 mm intervals. Results indicate that steady-state condition was rapidly attained. As expected, a diffusive boundary layer (DBL) was observed in all cases. An iterative back-calculation process using the numerical code POLLUTEv6 and taking the DBL into account provided the Kr values used to match calculated and experimental concentration profiles. Kr obtained for tailings TA1 and TA2 was about 80 d(-1) and 6.5 d(-1), respectively. For comparison purposes, Kr obtained from cell tests on tailings TA1 was lower than Kr calculated from the sulphate production rate obtained from shake-flask tests. Steady-state DO flux at the water-tailings interface was then calculated with POLLUTEv6 using tailings characteristics Dw and Kr. For the tested conditions, DO flux ranged from 608 to 758 mg O2/m(2)/d for tailings TA1 and from 177 to 221 mg O2/m(2)/d for tailings TA2. The impact of placing a protective layer of inert material over

  15. On the photosynthetic and devlopmental responses of leaves to the spectral composition of light

    OpenAIRE

    Hogewoning, S.W.

    2010-01-01

    Key words: action spectrum, artificial solar spectrum, blue light, Cucumis sativus, gas-exchange, light-emitting diodes (LEDs), light interception, light quality, non-photosynthetic pigments, photo-synthetic capacity, photomorphogenesis, photosystem excitation balance, quantum yield, red light. A wide range of plant properties respond to the spectral composition of irradiance, such as photosynthesis, photomorphogenesis, phototropism and photonastic movements. These responses affect plant pr...

  16. Anaerobic bacteria

    Science.gov (United States)

    Anaerobic bacteria are bacteria that do not live or grow when oxygen is present. In humans, these bacteria ... Brook I. Diseases caused by non-spore-forming anaerobic bacteria. In: Goldman L, Schafer AI, eds. Goldman-Cecil ...

  17. Uranium association with halophilic and non-halophilic bacteria and archaea

    International Nuclear Information System (INIS)

    Francis, A.J.; Gillow, J.B.; Dodge, C.J.; Harris, R.; Beveridge, T.J.; Papenguth, H.W.

    2004-01-01

    We determined the association of uranium with bacteria isolated from the Waste Isolation Pilot Plant (WIPP), Carlsbad, New Mexico, and compared this with known strains of halophilic and non-halophilic bacteria and archaea. Examination of the cultures by transmission electron microscopy (TEM) and energy dispersive X-ray spectroscopy (EDS) showed uranium accumulation extracellularly and/or intracellularly to a varying degree. In Pseudomonas fluorescens and Bacillus subtilis uranium was associated with the cell surface and in the latter it was present as irregularly shaped grains. In Halobacterium halobium, the only archeon studied here, uranium was present as dense deposits and with Haloanaerobium praevalens as spikey deposits. Halomonas sp. isolated from the WIPP site accumulated uranium both extracellularly on the cell surface and intracellularly as electron-dense discrete granules. Extended X-ray absorption fine structure (EXAFS) analysis of uranium with the halophilic and non-halophilic bacteria and archaea showed that the uranium present in whole cells was bonded to an average of 2.4 ± 0.7 phosphoryl groups at a distance of 3.65 ± 0.03 Aa. Comparison of whole cells of Halomonas sp. with the cell wall fragments of lysed cells showed the presence of a uranium bidentate complex at 2.91 ± 0.03 Aa with the carboxylate group on the cell wall, and uranyl hydroxide with U-U interaction at 3.71 ± 0.03 Aa due to adsorption or precipitation reactions; no U-P interaction was observed. Addition of uranium to the cell lysate of Halomonas sp. resulted in the precipitation of uranium due to the inorganic phosphate produced by the cells. These results show that the phosphates released from bacteria bind a significant amount of uranium. However, the bacterially immobilized uranium was readily solubilized by bicarbonate with concurrent release of phosphate into solution. (orig.)

  18. If it's good enough for Paris : U of C professor says microbiology advances will improve production and operations

    Energy Technology Data Exchange (ETDEWEB)

    Harrison, L.

    2009-07-15

    Nitrite has been used in Paris to prevent the formation of sulphide (H{sub 2}S) odour since the early 1900s. Yara International ASA is the biggest nitrate-producing company in the world and the City of Paris is its biggest customer. A microbiology professor at the University of Calgary is researching molecular physiology of sulphate-reducing bacteria and management of the sulphur cycle in oilfields. The microbiology research may lead to better hydrocarbon recoveries and reduce environmental impacts. The objective is to establish a critical mass of expertise in petroleum microbiology and to improve ways to reduce souring and corrosion, lower industry costs and extend the life of conventional production and offshore fields. The research team has been awarded funding of $680,000 per year for five years from the Natural Sciences and Engineering Research Council of Canada, the Alberta Energy Research Institute and 8 companies, including Yara International ASA. The program is focused on sulphur cycle management, corrosion prevention and enhanced recovery. It is expected that managing the sulphur cycle by using nitrate in the field will lower the concentration of sulphide produced by sulphate-reducing bacteria (SRB). Nitrate activates nitrate-reducing bacteria (NRB), which can oxidize the sulphide formed by SRB back to sulphate. Efforts will also be made to evaluate the corrosion risk associated with sulphide removal with nitrate. The research program will also focus on stimulating resident bacteria to make biomass, biosurfactants or viscosity-breaking chemicals that can improve production from conventional fields and oilsands with reduced environmental impacts. This may also involve converting residual oil to methane. 1 ref., 2 figs.

  19. Considerations on the analytic control of sulphide tracks in metal uranium

    International Nuclear Information System (INIS)

    Fernandez Cellini, R.; Gasco Sanchez, C.

    1956-01-01

    Volumetric and colorimetric determinations of sulphur (sulphide) in uranium have been carried out by acid treatment and evaluation of SH 2 . According to the experimental results a discussion of both methods has been made. (Author)

  20. Comparison among amoA Primers Suited for Quantification and Diversity Analyses of Ammonia-Oxidizing Bacteria in Soil

    Science.gov (United States)

    Shimomura, Yumi; Morimoto, Sho; Hoshino, Yuko Takada; Uchida, Yoshitaka; Akiyama, Hiroko; Hayatsu, Masahito

    2012-01-01

    Ammonia monooxygenase subunit A gene (amoA) is frequently used as a functional gene marker for diversity analysis of ammonia-oxidizing bacteria (AOB). To select a suitable amoA primer for real-time PCR and PCR-denaturing gradient gel electrophoresis (DGGE), three reverse primers (degenerate primer amoA-2R; non-degenerate primers amoA-2R-GG and amoA-2IR) were examined. No significant differences were observed among the three primers in terms of quantitative values of amoA from environmental samples using real-time PCR. We found that PCR-DGGE analysis with the amoA-2IR primer gave the best results in this studied soil. These results indicate that amoA-2IR is a suitable primer for community analysis of AOB in the environment. PMID:22075625

  1. The mineralogy and geochemistry of the copper lead and zinc sulphides of the Otavi Mountainland

    International Nuclear Information System (INIS)

    Emslie, D.P.

    1980-01-01

    A study of 44 samples from the area revealed that the major primary sulphides, which constitute the bulk of the mineralization, are galena, sphalerite, chalcopyrite, and tennantite. The copper mineralization is concentrated in the Huttenberg Formation of the Tsumeb Subgroup and in the Nosib Subgroup, and the lead and zinc mineralization mainly in the Berg Aukas, Gauss, Auros, Maieberg, and Elandshoek Formations of the Otavi Group. Antimony, manganese, and silver were detected in all the samples of galena analysed, and selenium in four deposits. Silver, iron, and zinc were found within tennantite exsolutions in sphalerite. The concentrations of these minor and trace elements are probably too low to affect the economic potential of any of the deposits. Manganese was also observed in samples of sphalerite, which were found to vary in colour according to their manganese content, being dark red when the manganese content is high and ranging through orange to yellow as the manganese content decreases.The deposits of the Otavi Mountainland are similar in many ways to deposits of the Mississippi Valley type, and a similar genesis is proposed for the Mountainland. It is sugessted that the genesis involved the deposition of sediments and chemical deposits in the Swakop Basin, the leaching of the contained metals from the clay particles by the fluid trapped in the sediments, and the transportation of these metals in brine solutions. Bacterial action resulted in the formation of hydrogen sulphide, which was then trapped in the solutions. Bacterial action resulted in the formation of hydrogen sulphide, which was then trapped in the carbonates and later released when the dolomitic rocks of the area were subjected to folding, faulting, and brecciation. On its release, the hydrogen sulphide reacted with the brine solutions to form sulphide deposits in the fault and breccia zones

  2. The Photodynamic Effect of LED-Magnetic Exposure to Photoinactivation of Aerobic Photosyntetic Bacteria

    OpenAIRE

    Astuti, Suryani Dyah

    2015-01-01

    All photosynthetic bacteria have a major pigment of bacteriochlorophyl and accessor pigment e.g. the carotenoids, which both have an important role in photosynthesis process. This study aim to explore the exogenous organic photosensitizer from photosyntetic bacteria for photodynamic therapy application. This study is an experimental research aiming to test the potential illumination of LED with wavelength 409, 430, 528 and 629 nm, and power optimization and time exposure LED-magnetic for opti...

  3. Peptidoglycan recognition proteins kill bacteria by inducing oxidative, thiol, and metal stress.

    Directory of Open Access Journals (Sweden)

    Des Raj Kashyap

    2014-07-01

    Full Text Available Mammalian Peptidoglycan Recognition Proteins (PGRPs are a family of evolutionary conserved bactericidal innate immunity proteins, but the mechanism through which they kill bacteria is unclear. We previously proposed that PGRPs are bactericidal due to induction of reactive oxygen species (ROS, a mechanism of killing that was also postulated, and later refuted, for several bactericidal antibiotics. Here, using whole genome expression arrays, qRT-PCR, and biochemical tests we show that in both Escherichia coli and Bacillus subtilis PGRPs induce a transcriptomic signature characteristic of oxidative stress, as well as correlated biochemical changes. However, induction of ROS was required, but not sufficient for PGRP killing. PGRPs also induced depletion of intracellular thiols and increased cytosolic concentrations of zinc and copper, as evidenced by transcriptome changes and supported by direct measurements. Depletion of thiols and elevated concentrations of metals were also required, but by themselves not sufficient, for bacterial killing. Chemical treatment studies demonstrated that efficient bacterial killing can be recapitulated only by the simultaneous addition of agents leading to production of ROS, depletion of thiols, and elevation of intracellular metal concentrations. These results identify a novel mechanism of bacterial killing by innate immunity proteins, which depends on synergistic effect of oxidative, thiol, and metal stress and differs from bacterial killing by antibiotics. These results offer potential targets for developing new antibacterial agents that would kill antibiotic-resistant bacteria.

  4. Association of red complex, A. actinomycetemcomitans and non-oral bacteria with periodontal diseases.

    Science.gov (United States)

    da Silva-Boghossian, Carina Maciel; do Souto, Renata Martins; Luiz, Ronir R; Colombo, Ana Paula Vieira

    2011-09-01

    Pathogens related to systemic infections have been detected in the periodontal microbiota. The relationship amongst these pathogens, periodontal bacteria and periodontal clinical status is poorly understood. This study evaluated the association amongst red complex, A. actinomycetemcomitans (A.a) and non-oral pathogenic bacteria in subjects with good periodontal health (PH), gingivitis (G), chronic (CP) and aggressive (AP) periodontitis. Subgingival biofilm samples were obtained from 51 PH, 42 G, 219 CP and 90 AP subjects. The presence and levels of A.a, red complex (Porphyromonas gingivalis, Tannerella forsythia, Treponema denticola), Acinetobacter baumannii, Escherichia coli, Enterococcus faecalis, Pseudomonas aeruginosa, and Staphylococcus aureus were determined by DNA probes and DNA-DNA hybridization technique. CP and AP subjects presented significantly higher prevalence and levels of A.a, red complex and A. baumannii than G and PH individuals (pperiodontal disease (pperiodontal pathogens and non-oral bacteria alone or in association were strongly associated with periodontitis. Copyright © 2011 Elsevier Ltd. All rights reserved.

  5. Radiation damage and its repair in non-sporulating bacteria

    International Nuclear Information System (INIS)

    Moseley, B.E.B.

    1984-01-01

    A review is given of radiation damage and its repair in non-sporulating bacteria. The identification and measurement of radiation damage in the DNA of the bacteria after exposure to ultraviolet radiation and ionizing radiation is described. Measuring the extent of DNA repair and ways of isolating repair mutants are also described. The DNA repair mechanisms for UV-induced damage are discussed including photoreactivation repair, excision repair, post-replication recombination repair and induced error-prone repair. The DNA repair mechanisms for ionizing radiation damage are also discussed including the repair of both single and double-strand breaks. Other aspects discussed include the effects of growth, irradiation medium and recovery medium on survival, DNA repair in humans, the commercial use of UV and ionizing radiations and the future of ionizing irradiation as a food treatment process. (U.K.)

  6. Dynamics of nitrification and denitrification in root- oxygenated sediments and adaptation of ammonia-oxidizing bacteria to low-oxygen or anoxic habitats

    NARCIS (Netherlands)

    Bodelier, P.L.E.; Libochant, J.A.; Blom, C.W.P.M.; Laanbroek, H.J.

    1996-01-01

    Oxygen-releasing plants may provide aerobic niches in anoxic sediments and soils for ammonia-oxidizing bacteria, The oxygen- releasing, aerenchymatous emergent macrophyte Glycerin maxima had a strong positive effect on numbers and activities of the nitrifying bacteria in its root zone in spring and

  7. Dynamics of nitrification and denitrification in root- oxygenated sediments and adaptation of ammonia-oxidizing bacteria to low-oxygen or anoxic habitats

    NARCIS (Netherlands)

    Bodelier, P.L.E.; Libochant, J.A.; Blom, C.W.P.M.; Laanbroek, H.J.

    1996-01-01

    Oxygen-releasing plants may provide aerobic niches in anoxic sediments and soils for ammonia-oxidizing bacteria. The oxygen-releasing, aerenchymatous emergent macrophyte Glyceria maxima had a strong positive effect on numbers and activities of the nitrifying bacteria in its root zone in spring and

  8. Dissimilatory Metabolism of Nitrogen Oxides in Bacteria:Comparative Reconstruction of Transcriptional Networks

    Energy Technology Data Exchange (ETDEWEB)

    Rodionov, Dmitry A.; Dubchak, Inna L.; Arkin, Adam P.; Alm, EricJ.; Gelfand, Mikhail S.

    2005-09-01

    Bacterial response to nitric oxide (NO) is of major importance since NO is an obligatory intermediate of the nitrogen cycle. Transcriptional regulation of the dissimilatory nitric oxides metabolism in bacteria is diverse and involves FNR-like transcription factors HcpR, DNR and NnrR, two-component systems NarXL and NarQP, NO-responsive activator NorR, and nitrite sensitive repressor NsrR. Using comparative genomics approaches we predict DNA-binding signals for these transcriptional factors and describe corresponding regulons in available bacterial genomes. Within the FNR family of regulators, we observed a correlation of two specificity-determining amino acids and contacting bases in corresponding DNA signal. Highly conserved regulon HcpR for the hybrid cluster protein and some other redox enzymes is present in diverse anaerobic bacteria including Clostridia, Thermotogales and delta-proteobacteria. NnrR and DNR control denitrification in alpha- and beta-proteobacteria, respectively. Sigma-54-dependent NorR regulon found in some gamma- and beta-proteobacteria contains various enzymes involved in the NO detoxification. Repressor NsrR, which was previously known to control only nitrite reductase operon in Nitrosomonas spp., appears to be the master regulator of the nitric oxides metabolism not only in most gamma- and beta-proteobacteria (including well-studied species like Escherichia coli), but also in Gram-positive Bacillus and Streptomyces species. Positional analysis and comparison of regulatory regions of NO detoxification genes allows us to propose the candidate NsrR-binding signal. The most conserved member of the predicted NsrR regulon is the NO-detoxifying flavohemoglobin Hmp. In enterobacteria, the regulon includes also two nitrite-responsive loci, nipAB (hcp-hcr) and nipC(dnrN), thus confirming the identity of the effector, i.e., nitrite. The proposed NsrR regulons in Neisseria and some other species are extended to include denitrification genes. As the

  9. Dissimilatory metabolism of nitrogen oxides in bacteria: comparative reconstruction of transcriptional networks.

    Directory of Open Access Journals (Sweden)

    2005-10-01

    Full Text Available Bacterial response to nitric oxide (NO is of major importance since NO is an obligatory intermediate of the nitrogen cycle. Transcriptional regulation of the dissimilatory nitric oxides metabolism in bacteria is diverse and involves FNR-like transcription factors HcpR, DNR, and NnrR; two-component systems NarXL and NarQP; NO-responsive activator NorR; and nitrite-sensitive repressor NsrR. Using comparative genomics approaches, we predict DNA-binding motifs for these transcriptional factors and describe corresponding regulons in available bacterial genomes. Within the FNR family of regulators, we observed a correlation of two specificity-determining amino acids and contacting bases in corresponding DNA recognition motif. Highly conserved regulon HcpR for the hybrid cluster protein and some other redox enzymes is present in diverse anaerobic bacteria, including Clostridia, Thermotogales, and delta-proteobacteria. NnrR and DNR control denitrification in alpha- and beta-proteobacteria, respectively. Sigma-54-dependent NorR regulon found in some gamma- and beta-proteobacteria contains various enzymes involved in the NO detoxification. Repressor NsrR, which was previously known to control only nitrite reductase operon in Nitrosomonas spp., appears to be the master regulator of the nitric oxides' metabolism, not only in most gamma- and beta-proteobacteria (including well-studied species such as Escherichia coli, but also in Gram-positive Bacillus and Streptomyces species. Positional analysis and comparison of regulatory regions of NO detoxification genes allows us to propose the candidate NsrR-binding motif. The most conserved member of the predicted NsrR regulon is the NO-detoxifying flavohemoglobin Hmp. In enterobacteria, the regulon also includes two nitrite-responsive loci, nipAB (hcp-hcr and nipC (dnrN, thus confirming the identity of the effector, i.e. nitrite. The proposed NsrR regulons in Neisseria and some other species are extended to include

  10. Pseudomonas mesophilica and an unnamed taxon, clinical isolates of pink-pigmented oxidative bacteria.

    OpenAIRE

    Gilardi, G L; Faur, Y C

    1984-01-01

    Twenty-one strains of pink-pigmented bacteria, isolated from human clinical specimens and an environmental source, were compared with Pseudomonas mesophilica ATCC 29983 and Protaminobacter ruber ATCC 8457. These isolates were gram-negative, oxidative rods which were motile by means of a single polar flagellum; gave positive catalase, indophenol oxidase, urease, and amylase reactions; and grew slowly at 30 degrees C. Fourteen isolates conformed to the designated type strains Pseudomonas mesoph...

  11. Microbial Iron Oxidation in the Arctic Tundra and Its Implications for Biogeochemical Cycling

    Science.gov (United States)

    Scott, Jarrod J.; Benes, Joshua; Bowden, William B.

    2015-01-01

    The role that neutrophilic iron-oxidizing bacteria play in the Arctic tundra is unknown. This study surveyed chemosynthetic iron-oxidizing communities at the North Slope of Alaska near Toolik Field Station (TFS) at Toolik Lake (lat 68.63, long −149.60). Microbial iron mats were common in submerged habitats with stationary or slowly flowing water, and their greatest areal extent is in coating plant stems and sediments in wet sedge meadows. Some Fe-oxidizing bacteria (FeOB) produce easily recognized sheath or stalk morphotypes that were present and dominant in all the mats we observed. The cool water temperatures (9 to 11°C) and reduced pH (5.0 to 6.6) at all sites kinetically favor microbial iron oxidation. A microbial survey of five sites based on 16S rRNA genes found a predominance of Proteobacteria, with Betaproteobacteria and members of the family Comamonadaceae being the most prevalent operational taxonomic units (OTUs). In relative abundance, clades of lithotrophic FeOB composed 5 to 10% of the communities. OTUs related to cyanobacteria and chloroplasts accounted for 3 to 25% of the communities. Oxygen profiles showed evidence for oxygenic photosynthesis at the surface of some mats, indicating the coexistence of photosynthetic and FeOB populations. The relative abundance of OTUs belonging to putative Fe-reducing bacteria (FeRB) averaged around 11% in the sampled iron mats. Mats incubated anaerobically with 10 mM acetate rapidly initiated Fe reduction, indicating that active iron cycling is likely. The prevalence of iron mats on the tundra might impact the carbon cycle through lithoautotrophic chemosynthesis, anaerobic respiration of organic carbon coupled to iron reduction, and the suppression of methanogenesis, and it potentially influences phosphorus dynamics through the adsorption of phosphorus to iron oxides. PMID:26386054

  12. Distribution of aerobic anoxygenic phototrophic bacteria in glacial lakes of northern Europe

    Czech Academy of Sciences Publication Activity Database

    Mašín, Michal; Čuperová, Zuzana; Hojerová, Eva; Salka, I.; Grossart, H. P.; Koblížek, Michal

    2012-01-01

    Roč. 66, č. 1 (2012), s. 77-86 ISSN 0948-3055 R&D Projects: GA MŠk(CZ) ED2.1.00/03.0110 Institutional support: RVO:61388971 Keywords : Aerobic photosynthetic bacteria * Lakes * Photoheterotrophy Subject RIV: EE - Microbiology, Virology Impact factor: 2.037, year: 2012

  13. Effect of communities of ammonia-oxidizing bacteria on degradation of 17-alpha-ethynylestradiol by nitrifying activated sludge

    Energy Technology Data Exchange (ETDEWEB)

    Limpiyakorn, T.; Sermwaraphan, P.; Kurisu, F.

    2009-07-01

    An endocrine disrupting compound, 17-alpha-ethynylestradiol (EE2), is a synthetic estrogen used as a key ingredient in oral contraceptives pill. this persistent organic pollutant, no biodegradable by most microorganisms, is discharged via municipal waste streams to natural receiving waters. Recently, it was found that ammonia-oxidizing bacteria (AOB) in nitrifying activated sludge (NAS) enriched with high ammonium loads can degrade EE2 via co-metabolism during ammonia oxidation. (Author)

  14. Herbivore Oral Secreted Bacteria Trigger Distinct Defense Responses in Preferred and Non-Preferred Host Plants.

    Science.gov (United States)

    Wang, Jie; Chung, Seung Ho; Peiffer, Michelle; Rosa, Cristina; Hoover, Kelli; Zeng, Rensen; Felton, Gary W

    2016-06-01

    Insect symbiotic bacteria affect host physiology and mediate plant-insect interactions, yet there are few clear examples of symbiotic bacteria regulating defense responses in different host plants. We hypothesized that plants would induce distinct defense responses to herbivore- associated bacteria. We evaluated whether preferred hosts (horsenettle) or non-preferred hosts (tomato) respond similarly to oral secretions (OS) from the false potato beetle (FPB, Leptinotarsa juncta), and whether the induced defense triggered by OS was due to the presence of symbiotic bacteria in OS. Both horsenettle and tomato damaged by antibiotic (AB) treated larvae showed higher polyphenol oxidase (PPO) activity than those damaged by non-AB treated larvae. In addition, application of OS from AB treated larvae induced higher PPO activity compared with OS from non-AB treated larvae or water treatment. False potato beetles harbor bacteria that may provide abundant cues that can be recognized by plants and thus mediate corresponding defense responses. Among all tested bacterial isolates, the genera Pantoea, Acinetobacter, Enterobacter, and Serratia were found to suppress PPO activity in tomato, while only Pantoea sp. among these four isolates was observed to suppress PPO activity in horsenettle. The distinct PPO suppression caused by symbiotic bacteria in different plants was similar to the pattern of induced defense-related gene expression. Pantoea inoculated FPB suppressed JA-responsive genes and triggered a SA-responsive gene in both tomato and horsenettle. However, Enterobacter inoculated FPB eliminated JA-regulated gene expression and elevated SA-regulated gene expression in tomato, but did not show evident effects on the expression levels of horsenettle defense-related genes. These results indicate that suppression of plant defenses by the bacteria found in the oral secretions of herbivores may be a more widespread phenomenon than previously indicated.

  15. Metal dispersion and mobility in soils from the Lik Zn-Pb-Ag massive sulphide deposit, NW Alaska: Environmental and exploration implications

    Science.gov (United States)

    Kelley, K.D.; Kelley, D.L.

    2003-01-01

    The Lik deposit in northern Alaska is a largely unexposed shale-hosted Zn-Pb-Ag massive sulphide deposit that is underlain by continuous permafrost. Residual soils overlying the mineralized zone have element enrichments that are two to six times greater than baseline values. The most prominent elements are Ag, Mo, P, Se, Sr, V by total 4-acid digestion and Tl by a weak partial digestion (Enzyme Leach or EL) because they show multi-point anomalies that extend across the entire mineralized zone, concentration ranges are 0.5-2.6 ppm Ag, 4-26 ppm Mo, 0.1-0.3% P, 3-22 ppm Se, 90-230 ppm Sr, 170-406 ppm V, and 1.6-30 ppb Tl. Lead, Sb, and Hg are also anomalous (up to 178 ppm, 30 ppm, and 1.9 ppm, respectively), but all are characterized by single point anomalies directly over the mineralized zone, with only slightly elevated concentrations over the lower mineralized section. Zinc (total) has a consistent baseline response of 200 ppm, but it is not elevated in soils overlying the mineralized zone. However, Zn by EL shows a distinct single-point anomaly over the ore zone that suggests it was highly mobile and partly adsorbed on oxides or other secondary phases during weathering. In situ analyses (by laser ablation ICP-MS) of pyrite and sphalerite from drill core suggest that sphalerite is the primary residence for Ag, Cd, and Hg in addition to Zn, and pyrite contains As, Fe, Sb, and Tl. The level and degree of oxidation, and the proportion of reacting pyrite and carbonate minerals are two factors that affected the mobility and transport of metals. In oxidizing conditions, Zn is highly mobile relative to Hg and Ag, perhaps explaining the decoupling of Zn from the other sphalerite-hosted elements in the soils. Soils are acidic (to 3.9 pH) directly over the deposit due to the presence of acid-producing pyrite, but acid-neutralizing carbonate away from the mineralized zone yield soils that are near neutral. The soils therefore formed in a complex system involving oxidation and

  16. The role of energy losses in photosynthetic light harvesting

    Science.gov (United States)

    Krüger, T. P. J.; van Grondelle, R.

    2017-07-01

    Photosynthesis operates at the bottom of the food chain to convert the energy of light into carbohydrates at a remarkable global rate of about 130 TW. Nonetheless, the overall photosynthetic process has a conversion efficiency of a few percent at best, significantly less than bottom-up photovoltaic cells. The primary photosynthetic steps, consisting of light harvesting and charge separation, are often presented as having near-unity quantum efficiency but this holds only true under ideal conditions. In this review, we discuss the importance of energy loss mechanisms to establish robustness in photosynthetic light harvesting. Thermal energy dissipation of light-harvesting complexes (LHCs) in different environments is investigated and the relationships and contrasts between concentration quenching of high pigment concentrations, photoprotection (non-photochemical quenching), quenching due to protein aggregation, and fluorescence blinking are discussed. The role of charge-transfer states in light harvesting and energy dissipation is highlighted and the importance of controlled protein structural disorder to switch the light-harvesting antennae between effective light harvesters and efficient energy quenchers is underscored. The main LHC of plants, LHCII, is used as a prime example.

  17. Granzyme B Disrupts Central Metabolism and Protein Synthesis in Bacteria to Promote an Immune Cell Death Program.

    Science.gov (United States)

    Dotiwala, Farokh; Sen Santara, Sumit; Binker-Cosen, Andres Ariel; Li, Bo; Chandrasekaran, Sriram; Lieberman, Judy

    2017-11-16

    Human cytotoxic lymphocytes kill intracellular microbes. The cytotoxic granule granzyme proteases released by cytotoxic lymphocytes trigger oxidative bacterial death by disrupting electron transport, generating superoxide anion and inactivating bacterial oxidative defenses. However, they also cause non-oxidative cell death because anaerobic bacteria are also killed. Here, we use differential proteomics to identify granzyme B substrates in three unrelated bacteria: Escherichia coli, Listeria monocytogenes, and Mycobacteria tuberculosis. Granzyme B cleaves a highly conserved set of proteins in all three bacteria, which function in vital biosynthetic and metabolic pathways that are critical for bacterial survival under diverse environmental conditions. Key proteins required for protein synthesis, folding, and degradation are also substrates, including multiple aminoacyl tRNA synthetases, ribosomal proteins, protein chaperones, and the Clp system. Because killer cells use a multipronged strategy to target vital pathways, bacteria may not easily become resistant to killer cell attack. Copyright © 2017 Elsevier Inc. All rights reserved.

  18. Different Metabolomic Responses to Carbon Starvation between Light and Dark Conditions in the Purple Photosynthetic Bacterium, Rhodopseudomonas palustris.

    Science.gov (United States)

    Kanno, Nanako; Matsuura, Katsumi; Haruta, Shin

    2018-03-29

    Purple photosynthetic bacteria utilize light energy for growth. We previously demonstrated that light energy contributed to prolonging the survival of multiple purple bacteria under carbon-starved conditions. In order to clarify the effects of illumination on metabolic states under carbon-starved, non-growing conditions, we herein compared the metabolic profiles of starved cells in the light and dark using the purple bacterium, Rhodopseudomonas palustris. The metabolic profiles of starved cells in the light were markedly different from those in the dark. After starvation for 5 d in the light, cells showed increases in the amount of ATP and the NAD + /NADH ratio. Decreases in the amounts of most metabolites related to glycolysis and the TCA cycle in energy-rich starved cells suggest the active utilization of these metabolites for the modification of cellular components. Starvation in the dark induced the consumption of cellular compounds such as amino acids, indicating that the degradation of these cellular components produced ATP in order to maintain viability under energy-poor conditions. The present results suggest that intracellular energy levels alter survival strategies under carbon-starved conditions through metabolism.

  19. Root-associated bacteria promote grapevine growth: from the laboratory to the field

    KAUST Repository

    Rolli, Eleonora

    2016-08-18

    Background and Aims: Laboratory and greenhouse experiments have shown that root-associated bacteria have beneficial effects on grapevine growth; however, these effects have not been tested in the field. Here, we aimed to demonstrate whether bacteria of different geographical origins derived from different crop plants can colonize grapevine to gain a beneficial outcome for the plant leading to promote growth at the field scale. Methods: To link the ecological functions of bacteria to the promotion of plant growth, we sorted fifteen bacterial strains from a larger isolate collection to study in vitro Plant Growth Promoting (PGP) traits. We analysed the ability of these strains to colonise the root tissues of grapevine and Arabidopsis using green-fluorescent-protein-labelled strain derivatives and a cultivation independent approach. We assessed the ability of two subsets randomly chosen from the 15 selected strains to promote grapevine growth in two field-scale experiments in north and central Italy over two years. Parameters of plant vigour were measured during the vegetative season in de novo grafted vine cuttings and adult productive plants inoculated with the bacterial strains. Results: Beneficial bacteria rapidly and intimately colonized the rhizoplane and the root system of grapevine. In the field, plants inoculated with bacteria isolated from grapevine roots out-performed untreated plants. In both the tested vineyards, bacteria-promotion effects largely rely in the formation of an extended epigeal system endowed of longer shoots with larger diameters and more nodes than non-inoculated plants. Conclusions: PGP bacteria isolated in the laboratory can be successfully used to promote growth of grapevines in the field. The resulting larger canopy potentially increased the photosynthetic surface of the grapevine, promoting growth.

  20. Force-dominated non-equilibrium oxidation kinetics of tantalum

    International Nuclear Information System (INIS)

    Kar, Prasenjit; Wang, Ke; Liang, Hong

    2008-01-01

    Using a combined electrochemical and mechanical manipulation technique, we compared the equilibrium and non-equilibrium oxidation processes and states of tantalum. Experimentally, a setup was developed with an electrochemical system attached to a sliding mechanical configuration capable of friction force measurement. The surface chemistry of a sliding surface, i.e., tantalum, was modified through the electrolyte. The mechanically applied force was fixed and the dynamics of the surface was monitored in situ through a force sensor. The formation of non-equilibrium oxidation states of tantalum was found in oxidation limiting environment of acetic acid. An oxidative environment of deionized water saturated with KCl was used as comparison. We proposed a modified Arrhenius-Eyring equation in which the mechanical factor was considered. We found that the mechanical energy induced the non-stable-state reactions leading to metastable oxidation states of tantalum. This equation can be used to predict mechanochemical reactions that are important in many industrial applications

  1. (AJST) OPTIMISATION OF THE BALUBA EAST ORE TREATMENT

    African Journals Online (AJOL)

    opiyo

    sulphide and oxide copper minerals. ... The associated concentrate grade was 26.10%TCu (without a cleaning stage) at a recovery of ... adsorption of sulphide ions on them. ... (a) Separation of floatables from non-floatables is the ..... where k is the number of treatments (levels of dosages). C.F: Correction factor = ni l. R. 1. 2.

  2. Three manganese oxide-rich marine sediments harbor similar communities of acetate-oxidizing manganese-reducing bacteria.

    Science.gov (United States)

    Vandieken, Verona; Pester, Michael; Finke, Niko; Hyun, Jung-Ho; Friedrich, Michael W; Loy, Alexander; Thamdrup, Bo

    2012-11-01

    Dissimilatory manganese reduction dominates anaerobic carbon oxidation in marine sediments with high manganese oxide concentrations, but the microorganisms responsible for this process are largely unknown. In this study, the acetate-utilizing manganese-reducing microbiota in geographically well-separated, manganese oxide-rich sediments from Gullmar Fjord (Sweden), Skagerrak (Norway) and Ulleung Basin (Korea) were analyzed by 16S rRNA-stable isotope probing (SIP). Manganese reduction was the prevailing terminal electron-accepting process in anoxic incubations of surface sediments, and even the addition of acetate stimulated neither iron nor sulfate reduction. The three geographically distinct sediments harbored surprisingly similar communities of acetate-utilizing manganese-reducing bacteria: 16S rRNA of members of the genera Colwellia and Arcobacter and of novel genera within the Oceanospirillaceae and Alteromonadales were detected in heavy RNA-SIP fractions from these three sediments. Most probable number (MPN) analysis yielded up to 10(6) acetate-utilizing manganese-reducing cells cm(-3) in Gullmar Fjord sediment. A 16S rRNA gene clone library that was established from the highest MPN dilutions was dominated by sequences of Colwellia and Arcobacter species and members of the Oceanospirillaceae, supporting the obtained RNA-SIP results. In conclusion, these findings strongly suggest that (i) acetate-dependent manganese reduction in manganese oxide-rich sediments is catalyzed by members of taxa (Arcobacter, Colwellia and Oceanospirillaceae) previously not known to possess this physiological function, (ii) similar acetate-utilizing manganese reducers thrive in geographically distinct regions and (iii) the identified manganese reducers differ greatly from the extensively explored iron reducers in marine sediments.

  3. Non-thermal plasma mills bacteria: scanning electron microscopy observations

    Czech Academy of Sciences Publication Activity Database

    Lunov, Oleg; Churpita, Olexandr; Zablotskyy, Vitaliy A.; Deyneka, I.G.; Meshkovskii, I.K.; Jäger, Aleš; Syková, Eva; Kubinová, Šárka; Dejneka, Alexandr

    2015-01-01

    Roč. 106, č. 5 (2015), "053703-1"-"053703-5" ISSN 0003-6951 R&D Projects: GA MŠk(CZ) LM2011029; GA MŠk(CZ) LM2011026; GA MŠk LO1309 Grant - others:AV ČR(CZ) M100101219; SAFMAT(XE) CZ.2.16/3.1.00/22132 Institutional support: RVO:68378271 ; RVO:68378041 Keywords : non-thermal plasma * plasma medicine * bacteria * cells Subject RIV: BO - Biophysics Impact factor: 3.142, year: 2015

  4. Horizontal gene transfer of a plastid gene in the non-photosynthetic flowering plants Orobanche and Phelipanche (Orobanchaceae).

    Science.gov (United States)

    Park, Jeong-Mi; Manen, Jean-François; Schneeweiss, Gerald M

    2007-06-01

    Plastid sequences are among the most widely used in phylogenetic and phylogeographic studies in flowering plants, where they are usually assumed to evolve like non-recombining, uniparentally transmitted, single-copy genes. Among others, this assumption can be violated by intracellular gene transfer (IGT) within cells or by the exchange of genes across mating barriers (horizontal gene transfer, HGT). We report on HGT of a plastid region including rps2, trnL-F, and rbcL in a group of non-photosynthetic flowering plants. Species of the parasitic broomrape genus Phelipanche harbor two copies of rps2, a plastid ribosomal gene, one corresponding to the phylogenetic position of the respective species, the other being horizontally acquired from the related broomrape genus Orobanche. While the vertically transmitted copies probably reside within the plastid genome, the localization of the horizontally acquired copies is not known. With both donor and recipient being parasitic plants, a possible pathway for the exchange of genetic material is via a commonly attacked host.

  5. Disseminated sulphides in basalts from the northern central Indian ridge: Implications on late-stage hydrothermal activity

    Digital Repository Service at National Institute of Oceanography (India)

    Banerjee, R.; Ray, D.

    interplay between oceanic crust fractur- ing due to tectonically active megamullions and subsequent hydrothermal alteration, accounting for the formation of dis- seminated sulphides at the NCIR. In a novel attempt, this study examines the mineralogy... of samples. Instead, the dark greyish coloured altered basalts, frequently fractured and often with a greenish tint, dominate the assemblage. Specks of sulphides are un- evenly distributed in these altered basalts as disseminated grains or fine stringers...

  6. Recovery of yttrium from fluorescent powder of cathode ray tube, CRT: Zn removal by sulphide precipitation

    International Nuclear Information System (INIS)

    Innocenzi, Valentina; De Michelis, Ida; Ferella, Francesco; Beolchini, Francesca; Kopacek, Bernd; Vegliò, Francesco

    2013-01-01

    Highlights: • Treatment of fluorescent powder of CRT waste. • Factorial experimental designs to study acid leaching of fluorescent powder and the purification of leach liquors. • Recover of yttrium by precipitation using oxalic acid. • Suitable flowsheet to recover yttrium from fluorescent powder. - Abstract: This work is focused on the recovery of yttrium and zinc from fluorescent powder of cathode ray tube (CRT). Metals are extracted by sulphuric acid in the presence of hydrogen peroxide. Leaching tests are carried out according to a 2 2 full factorial plan and the highest extraction yields for yttrium and zinc equal to 100% are observed under the following conditions: 3 M of sulphuric acid, 10% v/v of H 2 O 2 concentrated solution at 30% v/v, 10% w/w pulp density, 70 °C and 3 h of reaction. Two series of precipitation tests for zinc are carried out: a 2 2 full factorial design and a completely randomized factorial design. In these series the factors investigated are pH of solution during the precipitation and the amount of sodium sulphide added to precipitate zinc sulphide. The data of these tests are used to describe two empirical mathematical models for zinc and yttrium precipitation yields by regression analysis. The highest precipitation yields for zinc are obtained under the following conditions: pH equal to 2–2.5% and 10–12% v/v of Na 2 S concentrated solution at 10% w/v. In these conditions the coprecipitation of yttrium is of 15–20%. Finally further yttrium precipitation experiments by oxalic acid on the residual solutions, after removing of zinc, show that yttrium could be recovered and calcined to obtain the final product as yttrium oxide. The achieved results allow to propose a CRT recycling process based on leaching of fluorescent powder from cathode ray tube and recovery of yttrium oxide after removing of zinc by precipitation. The final recovery of yttrium is 75–80%

  7. Recovery of yttrium from fluorescent powder of cathode ray tube, CRT: Zn removal by sulphide precipitation

    Energy Technology Data Exchange (ETDEWEB)

    Innocenzi, Valentina, E-mail: valentina.innocenzi1@univaq.it [Department of Industrial Engineering and Information and Economy, University of L’Aquila, Via Giovanni Gronchi n.18, Nucleo Ind.le di Pile, 67100 L’Aquila (Italy); De Michelis, Ida; Ferella, Francesco [Department of Industrial Engineering and Information and Economy, University of L’Aquila, Via Giovanni Gronchi n.18, Nucleo Ind.le di Pile, 67100 L’Aquila (Italy); Beolchini, Francesca [Department of Marine Sciences, Polytechnic Institute of Marche, Via Brecce Bianche, 60131 Ancona (Italy); Kopacek, Bernd [SAT, Austrian Society for Systems Engineering and Automation, Gurkasse 43/2, A-1140 Vienna (Austria); Vegliò, Francesco [Department of Industrial Engineering and Information and Economy, University of L’Aquila, Via Giovanni Gronchi n.18, Nucleo Ind.le di Pile, 67100 L’Aquila (Italy)

    2013-11-15

    Highlights: • Treatment of fluorescent powder of CRT waste. • Factorial experimental designs to study acid leaching of fluorescent powder and the purification of leach liquors. • Recover of yttrium by precipitation using oxalic acid. • Suitable flowsheet to recover yttrium from fluorescent powder. - Abstract: This work is focused on the recovery of yttrium and zinc from fluorescent powder of cathode ray tube (CRT). Metals are extracted by sulphuric acid in the presence of hydrogen peroxide. Leaching tests are carried out according to a 2{sup 2} full factorial plan and the highest extraction yields for yttrium and zinc equal to 100% are observed under the following conditions: 3 M of sulphuric acid, 10% v/v of H{sub 2}O{sub 2} concentrated solution at 30% v/v, 10% w/w pulp density, 70 °C and 3 h of reaction. Two series of precipitation tests for zinc are carried out: a 2{sup 2} full factorial design and a completely randomized factorial design. In these series the factors investigated are pH of solution during the precipitation and the amount of sodium sulphide added to precipitate zinc sulphide. The data of these tests are used to describe two empirical mathematical models for zinc and yttrium precipitation yields by regression analysis. The highest precipitation yields for zinc are obtained under the following conditions: pH equal to 2–2.5% and 10–12% v/v of Na{sub 2}S concentrated solution at 10% w/v. In these conditions the coprecipitation of yttrium is of 15–20%. Finally further yttrium precipitation experiments by oxalic acid on the residual solutions, after removing of zinc, show that yttrium could be recovered and calcined to obtain the final product as yttrium oxide. The achieved results allow to propose a CRT recycling process based on leaching of fluorescent powder from cathode ray tube and recovery of yttrium oxide after removing of zinc by precipitation. The final recovery of yttrium is 75–80%.

  8. Hydrogen sulphide improves adaptation of Zea mays seedlings to iron deficiency.

    Science.gov (United States)

    Chen, Juan; Wu, Fei-Hua; Shang, Yu-Ting; Wang, Wen-Hua; Hu, Wen-Jun; Simon, Martin; Liu, Xiang; Shangguan, Zhou-Ping; Zheng, Hai-Lei

    2015-11-01

    Hydrogen sulphide (H2S) is emerging as a potential molecule involved in physiological regulation in plants. However, whether H2S regulates iron-shortage responses in plants is largely unknown. Here, the role of H2S in modulating iron availability in maize (Zea mays L. cv Canner) seedlings grown in iron-deficient culture solution is reported. The main results are as follows: Firstly, NaHS, a donor of H2S, completely prevented leaf interveinal chlorosis in maize seedlings grown in iron-deficient culture solution. Secondly, electron micrographs of mesophyll cells from iron-deficient maize seedlings revealed plastids with few photosynthetic lamellae and rudimentary grana. On the contrary, mesophyll chloroplasts appeared completely developed in H2S-treated maize seedlings. Thirdly, H2S treatment increased iron accumulation in maize seedlings by changing the expression levels of iron homeostasis- and sulphur metabolism-related genes. Fourthly, phytosiderophore (PS) accumulation and secretion were enhanced by H2S treatment in seedlings grown in iron-deficient solution. Indeed, the gene expression of ferric-phytosiderophore transporter (ZmYS1) was specifically induced by iron deficiency in maize leaves and roots, whereas their abundance was decreased by NaHS treatment. Lastly, H2S significantly enhanced photosynthesis through promoting the protein expression of ribulose-1,5-bisphosphate carboxylase large subunit (RuBISCO LSU) and phosphoenolpyruvate carboxylase (PEPC) and the expression of genes encoding RuBISCO large subunit (RBCL), small subunit (RBCS), D1 protein (psbA), and PEPC in maize seedlings grown in iron-deficient solution. These results indicate that H2S is closely related to iron uptake, transport, and accumulation, and consequently increases chlorophyll biosynthesis, chloroplast development, and photosynthesis in plants. © The Author 2015. Published by Oxford University Press on behalf of the Society for Experimental Biology.

  9. The Influence of Micro-Oxygen Addition on Desulfurization Performance and Microbial Communities during Waste-Activated Sludge Digestion in a Rusty Scrap Iron-Loaded Anaerobic Digester

    Directory of Open Access Journals (Sweden)

    Renjun Ruan

    2017-02-01

    Full Text Available In this study, micro-oxygen was integrated into a rusty scrap iron (RSI-loaded anaerobic digester. Under an optimal RSI dosage of 20 g/L, increasing O2 levels were added stepwise in seven stages in a semi-continuous experiment. Results showed the average methane yield was 306 mL/g COD (chemical oxygen demand, and the hydrogen sulphide (H2S concentration was 1933 ppmv with RSI addition. O2 addition induced the microbial oxidation of sulphide by stimulating sulfur-oxidizing bacteria and chemical corrosion of iron, which promoted the generation of FeS and Fe2S3. In the 6th phase of the semi-continuous test, deep desulfurization was achieved without negatively impacting system performance. Average methane yield was 301.1 mL/g COD, and H2S concentration was 75 ppmv. Sulfur mass balance was described, with 84.0%, 11.90% and 0.21% of sulfur present in solid, liquid and gaseous phases, respectively. The Polymerase Chain Reaction-Denaturing Gradient Gel Electrophoresis (PCR-DGGE analysis revealed that RSI addition could enrich the diversity of hydrogenotrophic methanogens and iron-reducing bacteria to benefit methanogenesis and organic mineralization, and impoverish the methanotroph (Methylocella silvestris to reduce the consumption of methane. Micro-oxygen supplementation could enhance the diversity of iron-oxidizing bacteria arising from the improvement of Fe(II release rate and enrich the sulphur-oxidising bacteria to achieved desulfurization. These results demonstrated that RSI addition in combination with micro-oxygenation represents a promising method for simultaneously controlling biogas H2S concentration and improving digestion performance.

  10. Transformation of monothioarsenate by haloalkaliphilic, anoxygenic photosynthetic purple sulfur bacteria.

    Science.gov (United States)

    Edwardson, Christian F; Planer-Friedrich, Britta; Hollibaugh, James T

    2014-12-01

    Thioarsenates are the dominant arsenic species in arsenic-rich, alkaline, and sulfidic waters, but bacterial interactions with these compounds have only recently been examined. Previous studies have shown that microorganisms play a role in the transformation of monothioarsenate to arsenate, including use of monothioarsenate as a chemolithotrophic electron donor coupled with oxygen as an electron acceptor. We obtained enrichment cultures from two saline, alkaline lakes (Mono Lake, CA and Big Soda Lake, NV) that are able to use monothioarsenate as the sole electron donor for anoxygenic photosynthesis. These anoxic cultures were able to convert a 1 mM mixture of thioarsenates completely to arsenate in c. 13 days and 4 mM monothioarsenate to arsenate in c. 17 days. This conversion was light dependent; thus, monothioarsenate can be used as the sole electron donor for anoxygenic photosynthesis. Both of the Mono Lake and Big Soda Lake enrichment cultures were dominated by an organism closely related to Ectothiorhodospira species. We tested additional strains of purple sulfur bacteria and found widespread ability to use monothioarsenate as an electron donor. The ability of bacteria to transform thioarsenates directly via anoxygenic photosynthesis adds a new perspective to the well-studied arsenic and sulfur cycles. © 2014 Federation of European Microbiological Societies. Published by John Wiley & Sons Ltd. All rights reserved.

  11. Identification of Mn(II)-oxidizing bacteria from a low-pH contaminated former uranium mine.

    Science.gov (United States)

    Akob, Denise M; Bohu, Tsing; Beyer, Andrea; Schäffner, Franziska; Händel, Matthias; Johnson, Carol A; Merten, Dirk; Büchel, Georg; Totsche, Kai Uwe; Küsel, Kirsten

    2014-08-01

    Biological Mn oxidation is responsible for producing highly reactive and abundant Mn oxide phases in the environment that can mitigate metal contamination. However, little is known about Mn oxidation in low-pH environments, where metal contamination often is a problem as the result of mining activities. We isolated two Mn(II)-oxidizing bacteria (MOB) at pH 5.5 (Duganella isolate AB_14 and Albidiferax isolate TB-2) and nine strains at pH 7 from a former uranium mining site. Isolate TB-2 may contribute to Mn oxidation in the acidic Mn-rich subsoil, as a closely related clone represented 16% of the total community. All isolates oxidized Mn over a small pH range, and isolates from low-pH samples only oxidized Mn below pH 6. Two strains with different pH optima differed in their Fe requirements for Mn oxidation, suggesting that Mn oxidation by the strain found at neutral pH was linked to Fe oxidation. Isolates tolerated Ni, Cu, and Cd and produced Mn oxides with similarities to todorokite and birnessite, with the latter being present in subsurface layers where metal enrichment was associated with Mn oxides. This demonstrates that MOB can be involved in the formation of biogenic Mn oxides in both moderately acidic and neutral pH environments. Copyright © 2014, American Society for Microbiology. All Rights Reserved.

  12. Identification of Mn(II)-oxidizing bacteria from a low-pH contaminated former uranium mine

    Science.gov (United States)

    Akob, Denise M.; Bohu, Tsing; Beyer, Andrea; Schäffner, Franziska; Händel, Matthias; Johnson, Carol A.; Merten, Dirk; Büchel, Georg; Totsche, Kai Uwe; Küsel, Kirsten

    2014-01-01

    Biological Mn oxidation is responsible for producing highly reactive and abundant Mn oxide phases in the environment that can mitigate metal contamination. However, little is known about Mn oxidation in low-pH environments, where metal contamination often is a problem as the result of mining activities. We isolated two Mn(II)-oxidizing bacteria (MOB) at pH 5.5 (Duganella isolate AB_14 and Albidiferax isolate TB-2) and nine strains at pH 7 from a former uranium mining site. Isolate TB-2 may contribute to Mn oxidation in the acidic Mn-rich subsoil, as a closely related clone represented 16% of the total community. All isolates oxidized Mn over a small pH range, and isolates from low-pH samples only oxidized Mn below pH 6. Two strains with different pH optima differed in their Fe requirements for Mn oxidation, suggesting that Mn oxidation by the strain found at neutral pH was linked to Fe oxidation. Isolates tolerated Ni, Cu, and Cd and produced Mn oxides with similarities to todorokite and birnessite, with the latter being present in subsurface layers where metal enrichment was associated with Mn oxides. This demonstrates that MOB can be involved in the formation of biogenic Mn oxides in both moderately acidic and neutral pH environments.

  13. Primary photosynthetic processes: from supercomplex to leaf

    NARCIS (Netherlands)

    Broess, K.

    2009-01-01

    This thesis describes fluorescence spectroscopy experiments on photosynthetic complexes that cover the primary photosynthetic processes, from the absorption of light by photosynthetic pigments to a charge separation (CS) in the reaction center (RC). Fluorescence spectroscopy is a useful tool in

  14. Foam generation during G.S. [Girdler sulphide] process and its prevention

    International Nuclear Information System (INIS)

    Lammirato, Alberto; Rojo, Enrique.

    1989-01-01

    Available literature, from both foreign and local sources, regarding foam generation during Girdler Sulphide (G.S.) process operation, was compiled. Assembly and operation of a loop for hydraulic process conditions simulation, of which further tests are to be expected, is reported. (Author) [es

  15. Dynamic transition of chemolithotrophic sulfur-oxidizing bacteria in response to amendment with nitrate in deposited marine sediments

    Directory of Open Access Journals (Sweden)

    Tomo eAoyagi

    2015-05-01

    Full Text Available Although environmental stimuli are known to affect the structure and function of microbial communities, their impact on the metabolic network of microorganisms has not been well investigated. Here, geochemical analyses, high-throughput sequencing of 16S rRNA genes and transcripts, and isolation of potentially relevant bacteria were carried out to elucidate the anaerobic respiration processes stimulated by nitrate (20 mM amendment of marine sediments. Marine sediments deposited by the Great East Japan Earthquake in 2011 were incubated anaerobically in the dark at 25°C for 5 days. Nitrate in slurry water decreased gradually for 2 days, then more rapidly until its complete depletion at day 5; production of N2O followed the same pattern. From day 2 to 5, the sulfate concentration increased and the sulfur content in solid-phase sediments significantly decreased. These results indicated that denitrification and sulfur oxidation occurred simultaneously. Illumina sequencing revealed the proliferation of known sulfur oxidizers, i.e., Sulfurimonas spp. and Chromatiales bacteria, which accounted for approximately 43.5% and 14.8% of the total population at day 5, respectively. They also expressed 16S rRNA to a considerable extent, whereas the other microorganisms, e.g., iron(III reducers and methanogens, became metabolically active at the end of the incubation. Extinction dilution culture in a basal-salts medium supplemented with sulfur compounds and nitrate successfully isolated the predominant sulfur oxidizers: Sulfurimonas sp. strain HDS01 and Thioalkalispira sp. strain HDS22. Their 16S rRNA genes showed 95.2−96.7% sequence similarity to the closest cultured relatives and they grew chemolithotrophically on nitrate and sulfur. Novel sulfur-oxidizing bacteria were thus directly involved in carbon fixation under nitrate-reducing conditions, activating anaerobic respiration processes and the reorganization of microbial communities in the deposited marine

  16. Photoproduction of hydrogen by a non-sulphur bacterium isolated from root zones of water fern Azolla pinnata

    Energy Technology Data Exchange (ETDEWEB)

    Singh, S.P.; Srivastava, S.C.; Pandey, K.D. (Banaras Hindu Univ., Varanasi (IN). Centre of Advanced Study in Botany)

    1990-01-01

    A photosynthetic bacterium Rhodopseudomonas sp. BHU strain 1 was isolated from the root zone of water fern Azolla pinnata. The bacterium was found to produce hydrogen with potato starch under phototrophic conditions. The immobilized bacterial cells showed sustained hydrogen production with a more than 4-fold difference over free cell suspensions. The data have been discussed in the light of possible utilization of relatively cheaper raw materials by non-sulphur bacteria to evolve hydrogen. (author).

  17. Bioenergetics of photoheterotrophic bacteria in the oceans.

    Science.gov (United States)

    Kirchman, David L; Hanson, Thomas E

    2013-04-01

    Photoheterotrophic microbes, such as proteorhodopsin (PR)-based phototrophic (PRP) and aerobic anoxygenic phototrophic (AAP) bacteria, are well known to be abundant in the oceans, potentially playing unique roles in biogeochemical cycles. However, the contribution of phototrophy to the energy requirements of these bacteria has not been quantitatively examined to date. To better understand the implications of photoheterophy in the oceans, we calculated energy benefits and costs of phototrophy and compared net benefits with maintenance costs. Benefits depend on the number of photosynthetic units (PSUs), absorption cross-section area of each PSU as function of wavelength, the in situ light quality, and the energy yield per absorbed photon. For costs we considered the energy required for the synthesis of pigments, amino acids and proteins in each PSU. Our calculations indicate that AAP bacteria harvest more light energy than do PRP bacteria, but the costs of phototrophy are much higher for AAP bacteria. Still, the net energy gained by AAP bacteria is often sufficient to meet maintenance costs, while that is not the case for PRP bacteria except with high light intensities and large numbers of proteorhodopsin molecules per cell. The low costs and simplicity of PR-based phototrophy explain the high abundance of proteorhodopsin genes in the oceans. However, even for AAP bacteria, the net energy yield of phototrophy is apparently too low to influence the distribution of photoheterotrophic bacteria among various marine systems. © 2012 Society for Applied Microbiology and Blackwell Publishing Ltd.

  18. Impedance spectroscopy studies of Silver Doped Cadmium Sulphide Nanocrystallites

    Science.gov (United States)

    Sivanand, R.; Chellammal, S.; Manivannan, S.

    2018-02-01

    Using co-precipitation method, cadmium sulphide (CdS) and silver doped cadmium sulphide (CdS;Ag) was prepared. By using energy-dispersive X-ray analysis (EDXA), X-ray diffraction (XRD) and scanning electron microscopy (SEM) to analyse the structural characterization of the prepared samples. The energy-dispersive X-ray analysis (EDXA) measurement is used to confirm, the presence of elements in prepared samples. There is no peaks of other impurity were detected. The average size of nanoparticles was calculated by scherrer formula. SEM photographs indicate that the nanopowders consist of well dispersed agglomerates of grains with a narrow size distribution, whereas the sizes of the individual particles are between 5 and 12 nm. The synthesized samples have been structurally analysed by X-ray diffraction method. The peaks in the XRD pattern are in good matches with the standard values of JCPDS file and other impurity peaks of crystalline phases were not detected. Scanning electron microscopy (SEM) measurement is used for the morphological studies. Electrical conductivity studies are analysed by Impedance spectroscopy measurement and also calculate the activation energies at low and high temperature for prepared samples.

  19. Potential Role of Nitrite for Abiotic Fe(II) Oxidation and Cell Encrustation during Nitrate Reduction by Denitrifying Bacteria

    Science.gov (United States)

    Klueglein, Nicole; Zeitvogel, Fabian; Stierhof, York-Dieter; Floetenmeyer, Matthias; Konhauser, Kurt O.; Obst, Martin

    2014-01-01

    Microorganisms have been observed to oxidize Fe(II) at neutral pH under anoxic and microoxic conditions. While most of the mixotrophic nitrate-reducing Fe(II)-oxidizing bacteria become encrusted with Fe(III)-rich minerals, photoautotrophic and microaerophilic Fe(II) oxidizers avoid cell encrustation. The Fe(II) oxidation mechanisms and the reasons for encrustation remain largely unresolved. Here we used cultivation-based methods and electron microscopy to compare two previously described nitrate-reducing Fe(II) oxidizers ( Acidovorax sp. strain BoFeN1 and Pseudogulbenkiania sp. strain 2002) and two heterotrophic nitrate reducers (Paracoccus denitrificans ATCC 19367 and P. denitrificans Pd 1222). All four strains oxidized ∼8 mM Fe(II) within 5 days in the presence of 5 mM acetate and accumulated nitrite (maximum concentrations of 0.8 to 1.0 mM) in the culture media. Iron(III) minerals, mainly goethite, formed and precipitated extracellularly in close proximity to the cell surface. Interestingly, mineral formation was also observed within the periplasm and cytoplasm; intracellular mineralization is expected to be physiologically disadvantageous, yet acetate consumption continued to be observed even at an advanced stage of Fe(II) oxidation. Extracellular polymeric substances (EPS) were detected by lectin staining with fluorescence microscopy, particularly in the presence of Fe(II), suggesting that EPS production is a response to Fe(II) toxicity or a strategy to decrease encrustation. Based on the data presented here, we propose a nitrite-driven, indirect mechanism of cell encrustation whereby nitrite forms during heterotrophic denitrification and abiotically oxidizes Fe(II). This work adds to the known assemblage of Fe(II)-oxidizing bacteria in nature and complicates our ability to delineate microbial Fe(II) oxidation in ancient microbes preserved as fossils in the geological record. PMID:24271182

  20. Crystal-free Formation of Non-Oxide Optical Fiber

    Science.gov (United States)

    Nabors, Sammy A.

    2015-01-01

    Researchers at NASA Marshall Space Flight Center have devised a method for the creation of crystal-free nonoxide optical fiber preforms. Non-oxide fiber optics are extensively used in infrared transmitting applications such as communication systems, chemical sensors, and laser fiber guides for cutting, welding and medical surgery. However, some of these glasses are very susceptible to crystallization. Even small crystals can lead to light scatter and a high attenuation coefficient, limiting their usefulness. NASA has developed a new method of non-oxide fiber formation that uses axial magnetic fields to suppress crystallization. The resulting non-oxide fibers are crystal free and have lower signal attenuation rates than silica based optical fibers.