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Sample records for non-photochemical fluorescence quenching

  1. Non-Photochemical Fluorescence Quenching Across Scales: From Chloroplasts to Plants to Communities

    NARCIS (Netherlands)

    Murchie, E.H.; Harbinson, J.

    2014-01-01

    Non-photochemical quenching (NPQ) of chlorophyll fluorescence, as a measure of photoprotective thermal dissipation of excess excitation energy (from singlet state chlorophyll a), is usually studied at the molecular, organelle, and leaf scale over relatively short time periods, where it is most readi

  2. Non-photochemical fluorescence quenching and the diadinoxanthin cycle in a marine diatom.

    Science.gov (United States)

    Olaizola, M; La Roche, J; Kolber, Z; Falkowski, P G

    1994-08-01

    The diadinoxanthin cycle (DD-cycle) in chromophyte algae involves the interconversion of two carotenoids, diadinoxanthin (DD) and diatoxanthin (DT). We investigated the kinetics of light-induced DD-cycling in the marine diatom Phaeodactylum tricornutum and its role in dissipating excess excitation energy in PS II. Within 15 min following an increase in irradiance, DT increased and was accompanied by a stoichiometric decrease in DD. This reaction was completely blocked by dithiothreitol (DTT). A second, time-dependent, increase in DT was detected ∼ 20 min after the light shift without a concomitant decrease in DD. DT accumulation from both processes was correlated with increases in non-photochemical quenching of chlorophyll fluorescence. Stern-Volmer analyses suggests that changes in non-photochemical quenching resulted from changes in thermal dissipation in the PS II antenna and in the reaction center. The increase in non-photochemical quenching was correlated with a small decrease in the effective absorption cross section of PS II. Model calculations suggest however that the changes in cross section are not sufficiently large to significantly reduce multiple excitation of the reaction center within the turnover time of steady-state photosynthetic electron transport at light saturation. In DTT poisoned cells, the change in non-photochemical quenching appears to result from energy dissipation in the reaction center and was associated with decreased photochemical efficiency. D1 protein degradation was slightly higher in samples poisoned with DTT than in control samples. These results suggest that while DD-cycling may dynamically alter the photosynthesis-irradiance response curve, it offers limited protection against photodamage of PS II reaction centers at irradiance levels sufficient to saturate steady-state photosynthesis.

  3. O2-dependent electron flow, membrane energization and the mechanism of non-photochemical quenching of chlorophyll fluorescence.

    Science.gov (United States)

    Schreiber, U; Neubauer, C

    1990-09-01

    Recent progress in chlorophyll fluorescence research is reviewed, with emphasis on separation of photochemical and non-photochemical quenching coefficients (qP and qN) by the 'saturation pulse method'. This is part of an introductory talk at the Wageningen Meeting on 'The use of chlorophyll fluorescence and other non-invasive techniques in plant stress physiology'. The sequence of events is investigated which leads to down-regulation of PS II quantum yield in vivo, expressed in formation of qN. The role of O2-dependent electron flow for ΔpH- and qN-formation is emphasized. Previous conclusions on the rate of 'pseudocyclic' transport are re-evaluated in view of high ascorbate peroxidase activity observed in intact chloroplasts. It is proposed that the combined Mehler-Peroxidase reaction is responsible for most of the qN developed when CO2-assimilation is limited. Dithiothreitol is shown to inhibit part of qN-formation as well as peroxidase-induced electron flow. As to the actual mechanism of non-photochemical quenching, it is demonstrated that quenching is favored by treatments which slow down reactions at the PS II donor side. The same treatments are shown to stimulate charge recombination, as measured via 50 μs luminescence. It is suggested that also in vivo internal thylakoid acidification leads to stimulation of charge recombination, although on a more rapid time scale. A unifying model is proposed, incorporating reaction center and antenna quenching, with primary control of ΔpH at the PS II reaction center, involving radical pair spin transition and charge recombination to the triplet state in a first quenching step. In a second step, triplet excitation is trapped by zeaxanthin (if present) which in its triplet excited state causes additional quenching of singlet excited chlorophyll.

  4. Temperature dependence of violaxanthin de-epoxidation and non-photochemical fluorescence quenching in intact leaves of Gossypium hirsutum L. and Malva parviflora L.

    Science.gov (United States)

    Bilger, W; Björkman, O

    1991-05-01

    The temperature dependence of the rate of de-epoxidation of violaxanthin to zeaxanthin was determined in leaves of chilling-sensitive Gossypium hirsutum L. (cotton) and chilling-resistant Malva parviflora L. by measurements of the increase in absorbance at 505 nm (ΔA 505) and in the contents of antheraxanthin and zeaxanthin that occur upon exposure of predarkened leaves to excessive light. A linear relationship between ΔA 505 and the decrease in the epoxidation state of the xanthophyll-cycle pigment pool was obtained over the range 10-40° C. The maximal rate of de-epoxidation was strongly temperature dependent; Q10 measured around the temperature at which the leaf had developed was 2.1-2.3 in both species. In field-grown Malva the rate of de-epoxidation at any given measurement temperature was two to three times higher in leaves developed at a relatively low temperature in the early spring than in those developed in summer. Q10 measured around 15° C was in the range 2.2-2.6 in both kinds of Malva leaves, whereas it was as high as 4.6 in cotton leaves developed at a daytime temperature of 30° C. Whereas the maximum (initial) rate of de-epoxidation showed a strong decrease with decreased temperature the degree of de-epoxidation reached in cotton leaves after a 1-2 · h exposure to a constant photon flux density increased with decreased temperature as the rate of photosynthesis decrease. The zeaxanthin content rose from 2 mmol · (mol chlorophyll)(-1) at 30° C to 61 mmol · (mol Chl)(-1) at 10° C, corresponding to a de-epoxidation of 70% of the violaxanthin pool at 10° C. The degree of de-epoxidation at each temperature was clearly related to the amount of excessive light present at that temperature. The relationship between non-photochemical quenching of chlorophyll fluorescence and zeaxanthin formation at different temperatures was determined for both untreated control leaves and for leaves in which zeaxanthin formation was prevented by dithiothreitol

  5. The structural basis of non-photochemical quenching is revealed?

    Science.gov (United States)

    Cogdell, Richard J

    2006-02-01

    Light-harvesting complex II (LHCII, the major plant light-harvesting pigment-protein complex, efficiently harvests light-energy. However, if the incident light intensity is too high and photosynthesis becomes saturated, LHCII can switch into a quenching state that prevents photodamage. This important process is called non-photochemical quenching, or NPQ, and represents feedback control. Andrew Pascal et al. have recently proposed a detailed model of NPQ based upon the crystal structure of LHCII from spinach.

  6. Multi-Level, Multi Time-Scale Fluorescence Intermittency of Photosynthetic LH2 Complexes: A Precursor of Non-Photochemical Quenching?

    Science.gov (United States)

    Schörner, Mario; Beyer, Sebastian Reinhardt; Southall, June; Cogdell, Richard J; Köhler, Jürgen

    2015-11-01

    The light harvesting complex LH2 is a chromoprotein that is an ideal system for studying protein dynamics via the spectral fluctuations of the emission of its intrinsic chromophores. We have immobilized these complexes in a polymer film and studied the fluctuations of the fluorescence intensity from individual complexes over 9 orders of magnitude in time. Combining time-tagged detection of single photons with a change-point analysis has allowed the unambigeous identification of the various intensity levels due to the huge statistical basis of the data set. We propose that the observed intensity level fluctuations reflect conformational changes of the protein backbone that might be a precursor of the mechanism from which nonphotochemical quenching of higher plants has evolved.

  7. Light-induced dissociation of an antenna hetero-oligomer is needed for non-photochemical quenching induction.

    Science.gov (United States)

    Betterle, Nico; Ballottari, Matteo; Zorzan, Simone; de Bianchi, Silvia; Cazzaniga, Stefano; Dall'osto, Luca; Morosinotto, Tomas; Bassi, Roberto

    2009-05-29

    PsbS plays a major role in activating the photoprotection mechanism known as "non-photochemical quenching," which dissipates chlorophyll excited states exceeding the capacity for photosynthetic electron transport. PsbS activity is known to be triggered by low lumenal pH. However, the molecular mechanism by which this subunit regulates light harvesting efficiency is still unknown. Here we show that PsbS controls the association/dissociation of a five-subunit membrane complex, composed of two monomeric Lhcb proteins (CP29 and CP24) and the trimeric LHCII-M. Dissociation of this supercomplex is indispensable for the onset of non-photochemical fluorescence quenching in high light, strongly suggesting that protein subunits catalyzing the reaction of heat dissipation are buried into the complex and thus not available for interaction with PsbS. Consistently, we showed that knock-out mutants on two subunits participating to the B4C complex were strongly affected in heat dissipation. Direct observation by electron microscopy and image analysis showed that B4C dissociation leads to the redistribution of PSII within grana membranes. We interpreted these results to mean that the dissociation of B4C makes quenching sites, possibly CP29 and CP24, available for the switch to an energy-quenching conformation. These changes are reversible and do not require protein synthesis/degradation, thus allowing for changes in PSII antenna size and adaptation to rapidly changing environmental conditions.

  8. Ecophysiology of photosynthesis in bryophytes: major roles for oxygen photoreduction and non-photochemical quenching?

    Science.gov (United States)

    Proctor, Michael C F; Smirnoff, Nicholas

    2011-02-01

    CO(2) fixation in mosses saturates at moderate irradiances. Relative electron transport rate (RETR) inferred from chlorophyll fluorescence saturates at similar irradiance in shade species (e.g. Plagiomnium undulatum, Trichocolea tomentella), but many species of unshaded habitats (e.g. Andreaea rothii, Schistidium apocarpum, Sphagnum spp. and Frullania dilatata) show non-saturating RETR at high irradiance, with high non-photochemical quenching (NPQ). In P. undulatum and S. apocarpum, experiments in different gas mixtures showed O(2) and CO(2) as interchangeable electron sinks. Nitrogen + saturating CO(2) gave high RETR and depressed NPQ. In S. apocarpum, glycolaldehyde (inhibiting photosynthesis and photorespiration) depressed RETR in air more at low than at high irradiance; in CO(2) -free air RETR was maintained at all irradiances. Non-saturating electron flow was not suppressed in ambient CO(2) with 1% O(2) . The results indicate high capacity for oxygen photoreduction when CO(2) assimilation is limited. Non-saturating light-dependent H(2) O(2) production, insensitive to glycolaldehyde, suggests that electron transport is supported by oxygen photoreduction, perhaps via the Mehler-peroxidase reaction. Consistent with this, mosses were highly tolerant to paraquat, which generates superoxide at photosystem I (PSI). Protection against excess excitation energy in mosses involves high capacity for photosynthetic electron transport to oxygen and high NPQ, activated at high irradiance, alongside high reactive oxygen species (ROS) tolerance.

  9. Non-photochemical quenching in cryptophyte alga Rhodomonas salina is located in chlorophyll a/c antennae.

    Science.gov (United States)

    Kaňa, Radek; Kotabová, Eva; Sobotka, Roman; Prášil, Ondřej

    2012-01-01

    Photosynthesis uses light as a source of energy but its excess can result in production of harmful oxygen radicals. To avoid any resulting damage, phototrophic organisms can employ a process known as non-photochemical quenching (NPQ), where excess light energy is safely dissipated as heat. The mechanism(s) of NPQ vary among different phototrophs. Here, we describe a new type of NPQ in the organism Rhodomonas salina, an alga belonging to the cryptophytes, part of the chromalveolate supergroup. Cryptophytes are exceptional among photosynthetic chromalveolates as they use both chlorophyll a/c proteins and phycobiliproteins for light harvesting. All our data demonstrates that NPQ in cryptophytes differs significantly from other chromalveolates - e.g. diatoms and it is also unique in comparison to NPQ in green algae and in higher plants: (1) there is no light induced xanthophyll cycle; (2) NPQ resembles the fast and flexible energetic quenching (qE) of higher plants, including its fast recovery; (3) a direct antennae protonation is involved in NPQ, similar to that found in higher plants. Further, fluorescence spectroscopy and biochemical characterization of isolated photosynthetic complexes suggest that NPQ in R. salina occurs in the chlorophyll a/c antennae but not in phycobiliproteins. All these results demonstrate that NPQ in cryptophytes represents a novel class of effective and flexible non-photochemical quenching.

  10. Non-photochemical quenching in cryptophyte alga Rhodomonas salina is located in chlorophyll a/c antennae.

    Directory of Open Access Journals (Sweden)

    Radek Kaňa

    Full Text Available Photosynthesis uses light as a source of energy but its excess can result in production of harmful oxygen radicals. To avoid any resulting damage, phototrophic organisms can employ a process known as non-photochemical quenching (NPQ, where excess light energy is safely dissipated as heat. The mechanism(s of NPQ vary among different phototrophs. Here, we describe a new type of NPQ in the organism Rhodomonas salina, an alga belonging to the cryptophytes, part of the chromalveolate supergroup. Cryptophytes are exceptional among photosynthetic chromalveolates as they use both chlorophyll a/c proteins and phycobiliproteins for light harvesting. All our data demonstrates that NPQ in cryptophytes differs significantly from other chromalveolates - e.g. diatoms and it is also unique in comparison to NPQ in green algae and in higher plants: (1 there is no light induced xanthophyll cycle; (2 NPQ resembles the fast and flexible energetic quenching (qE of higher plants, including its fast recovery; (3 a direct antennae protonation is involved in NPQ, similar to that found in higher plants. Further, fluorescence spectroscopy and biochemical characterization of isolated photosynthetic complexes suggest that NPQ in R. salina occurs in the chlorophyll a/c antennae but not in phycobiliproteins. All these results demonstrate that NPQ in cryptophytes represents a novel class of effective and flexible non-photochemical quenching.

  11. Effects of Water Stress on Photochemical Quenching and Non-photochemical Quenching of Chlorophyll a Fluorescence in Four Tree Seedlings%水分胁迫对4种苗木叶绿素荧光的光化学淬灭和非光化学淬灭的影响

    Institute of Scientific and Technical Information of China (English)

    史胜青; 袁玉欣; 杨敏生; 梁海永; 张金香

    2004-01-01

    The changes of photochemical quenching(qp) and non-photochemical quenching(qN) of chlorophyll a fluorescence in leaves of four tree seedlings ( Gleditsia sinensis, Juglans regia, Diospyros kaki and Diospyros lotus ) were different between two different water stress ways:detached drought treatment and potted drought treatment. After 4 hours dehydration by leaf detaching,the qp values had significant decrease except J. regia, only 6 hours later, the qp values compared with contrast decreased significantly in four tree seedlings(P>0.05), but the range of reduction( G.sinensis, J.regia and D.lotus) was just 2.5% to 6.4%. D.kaki, however,got to 31.3%. While the qN values increased significantly with conducting dehydration of the detached leaves. However, the qp values of four species showed no significant decrease when they were growing in pots under soil water stress(40%~60% RWC) for 30 days; and the qN values decreased obviously with a exception in J. regia, which was consistent with that of detached leaf treatment. The results suggested that some difference or changes in mechanism of excess light energy dissipation might perform in four seedlings by short-term and long-term water stress.

  12. A mathematical model of non-photochemical quenching to study short-term light memory in plants.

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    Matuszyńska, Anna; Heidari, Somayyeh; Jahns, Peter; Ebenhöh, Oliver

    2016-12-01

    Plants are permanently exposed to rapidly changing environments, therefore it is evident that they had to evolve mechanisms enabling them to dynamically adapt to such fluctuations. Here we study how plants can be trained to enhance their photoprotection and elaborate on the concept of the short-term illumination memory in Arabidopsis thaliana. By monitoring fluorescence emission dynamics we systematically observe the extent of non-photochemical quenching (NPQ) after previous light exposure to recognise and quantify the memory effect. We propose a simplified mathematical model of photosynthesis that includes the key components required for NPQ activation, which allows us to quantify the contribution to photoprotection by those components. Due to its reduced complexity, our model can be easily applied to study similar behavioural changes in other species, which we demonstrate by adapting it to the shadow-tolerant plant Epipremnum aureum. Our results indicate that a basic mechanism of short-term light memory is preserved. The slow component, accumulation of zeaxanthin, accounts for the amount of memory remaining after relaxation in darkness, while the fast one, antenna protonation, increases quenching efficiency. With our combined theoretical and experimental approach we provide a unifying framework describing common principles of key photoprotective mechanisms across species in general, mathematical terms.

  13. Increased biomass productivity in green algae by tuning non-photochemical quenching

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    Berteotti, Silvia; Ballottari, Matteo; Bassi, Roberto

    2016-01-01

    Photosynthetic microalgae have a high potential for the production of biofuels and highly valued metabolites. However, their current industrial exploitation is limited by a productivity in photobioreactors that is low compared to potential productivity. The high cell density and pigment content of the surface layers of photosynthetic microalgae result in absorption of excess photons and energy dissipation through non-photochemical quenching (NPQ). NPQ prevents photoinhibition, but its activation reduces the efficiency of photosynthetic energy conversion. In Chlamydomonas reinhardtii, NPQ is catalyzed by protein subunits encoded by three lhcsr (light harvesting complex stress related) genes. Here, we show that heat dissipation and biomass productivity depends on LHCSR protein accumulation. Indeed, algal strains lacking two lhcsr genes can grow in a wide range of light growth conditions without suffering from photoinhibition and are more productive than wild-type. Thus, the down-regulation of NPQ appears to be a suitable strategy for improving light use efficiency for biomass and biofuel production in microalgae. PMID:26888481

  14. Canopy-Level Photochemical Reflectance Index from Hyperspectral Remote Sensing and Leaf-Level Non-Photochemical Quenching as Early Indicators of Water Stress in Maize

    Directory of Open Access Journals (Sweden)

    Shuren Chou

    2017-08-01

    Full Text Available In this study, we evaluated the effectiveness of photochemical reflectance index (PRI and non-photochemical quenching (NPQ for assessing water stress in maize for the purpose of developing remote sensing techniques for monitoring water deficits in crops. Leaf-level chlorophyll fluorescence and canopy-level PRI were measured concurrently over a maize field with five different irrigation treatments, ranging from 20% to 90% of the field capacity (FC. Significant correlations were found between leaf-level NPQ (NPQleaf and the ratio of chlorophyll to carotenoid content (Chl/Car (R2 = 0.71, p < 0.01 and between NPQleaf and the actual photochemical efficiency of photosystem II (ΔF/Fm′ (R2 = 0.81, p < 0.005. At the early growing stage, both canopy-level PRI and NPQleaf are good indicators of water stress (R2 = 0.65 and p < 0.05; R2 = 0.63 and p < 0.05, respectively. For assessment of extreme water stress on plant growth, a relationship is also established between the quantum yield of photochemistry in PSII (ΦP and the quantum yield of fluorescence (ΦF as determined from photochemical quenching (PQ and non-photochemical quenching (NPQleaf of excitation energy at different water stress levels. These results would be helpful in monitoring soil water stress on crops at large scales using remote sensing techniques.

  15. Arctic Micromonas uses protein pools and non-photochemical quenching to cope with temperature restrictions on Photosystem II protein turnover.

    Science.gov (United States)

    Ni, Guangyan; Zimbalatti, Gabrielle; Murphy, Cole D; Barnett, Audrey B; Arsenault, Christopher M; Li, Gang; Cockshutt, Amanda M; Campbell, Douglas A

    2017-02-01

    Micromonas strains of small prasinophyte green algae are found throughout the world's oceans, exploiting widely different niches. We grew arctic and temperate strains of Micromonas and compared their susceptibilities to photoinactivation of Photosystem II, their counteracting Photosystem II repair capacities, their Photosystem II content, and their induction and relaxation of non-photochemical quenching. In the arctic strain Micromonas NCMA 2099, the cellular content of active Photosystem II represents only about 50 % of total Photosystem II protein, as a slow rate constant for clearance of PsbA protein limits instantaneous repair. In contrast, the temperate strain NCMA 1646 shows a faster clearance of PsbA protein which allows it to maintain active Photosystem II content equivalent to total Photosystem II protein. Under growth at 2 °C, the arctic Micromonas maintains a constitutive induction of xanthophyll deepoxidation, shown by second-derivative whole-cell spectra, which supports strong induction of non-photochemical quenching under low to moderate light, even if xanthophyll cycling is blocked. This non-photochemical quenching, however, relaxes during subsequent darkness with kinetics nearly comparable to the temperate Micromonas NCMA 1646, thereby limiting the opportunity cost of sustained downregulation of PSII function after a decrease in light.

  16. LHC II protein phosphorylation in leaves of Arabidopsis thaliana mutants deficient in non-photochemical quenching.

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    Breitholtz, Hanna-Leena; Srivastava, Renu; Tyystjärvi, Esa; Rintamäki, Eevi

    2005-06-01

    Phosphorylation of the light-harvesting chlorophyll a/b complex II (LHC II) proteins is induced in light via activation of the LHC II kinase by reduction of cytochrome b(6)f complex in thylakoid membranes. We have recently shown that, besides this activation, the LHC II kinase can be regulated in vitro by a thioredoxin-like component, and H2O2 that inserts an inhibitory loop in the regulation of LHC II protein phosphorylation in the chloroplast. In order to disclose the complex network for LHC II protein phosphorylation in vivo, we studied phosphorylation of LHC II proteins in the leaves of npq1-2 and npq4-1 mutants of Arabidopis thaliana. In comparison to wild-type, these mutants showed reduced non-photochemical quenching and increased excitation pressure of Photosystem II (PS II) under physiological light intensities. Peculiar regulation of LHC II protein phosphorylation was observed in mutant leaves under illumination. The npq4-1 mutant was able to maintain a high amount of phosphorylated LHC II proteins in thylakoid membranes at light intensities that induced inhibition of phosphorylation in wild-type leaves. Light intensity-dependent changes in the level of LHC II protein phosphorylation were smaller in the npq1-2 mutant compared to the wild-type. No significant differences in leaf thickness, dry weight, chlorophyll content, or the amount of LHC II proteins were observed between the two mutant and wild-type lines. We propose that the reduced capacity of the mutant lines to dissipate excess excitation energy induces changes in the production of reactive oxygen species in chloroplasts, which consequently affects the regulation of LHC II protein phosphorylation.

  17. Light harvesting and blue-green light induced non-photochemical quenching in two different C-phycocyanin mutants of Synechocystis PCC 6803.

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    Tian, Lijin; van Stokkum, Ivo H M; Koehorst, Rob B M; van Amerongen, Herbert

    2013-09-26

    Cyanobacteria are oxygen-evolving photosynthetic organisms that harvest sunlight and convert excitation energy into chemical energy. Most of the light is absorbed by large light harvesting complexes called phycobilisomes (PBs). In high-light conditions, cyanobacteria switch on a photoprotective mechanism called non-photochemical quenching (NPQ): During this process, absorption of blue-green light transforms the inactive orange form of the orange carotenoid protein OCP (OCP(o)) into the red active form OCP(r) that subsequently binds to the PB, resulting in a substantial loss of excitation energy and corresponding decrease of the fluorescence. In wild-type cells, the quenching site is a bilin chomophore that fluoresces at 660 nm and which is called APC(Q)(660). In the present work, we studied NPQ in two different types of mutant cells (CB and CK) that possess significantly truncated PBs, using spectrally resolved picosecond fluorescence spectroscopy. The results are in very good agreement with earlier in vitro experiments on quenched and unquenched PBs, although the fraction of quenched PBs is far lower in vivo. It is also lower than the fraction of PBs that is quenched in wild-type cells, but the site, rate, and location of quenching appear to be very similar.

  18. Responses to desiccation stress in bryophytes and an important role of dithiothreitol-insensitive non-photochemical quenching against photoinhibition in dehydrated states.

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    Nabe, Hayase; Funabiki, Ryoko; Kashino, Yasuhiro; Koike, Hiroyuki; Satoh, Kazuhiko

    2007-11-01

    The effects of air drying and hypertonic treatments in the dark on seven bryophytes, which had grown under different water environments, were studied. All the desiccation-tolerant species tested lost most of their PSII photochemical activity when photosynthetic electron transport was inhibited by air drying, while, in all the sensitive species, the PSII photochemical activity remained at a high level even when photosynthesis was totally inhibited. The PSI reaction center remained active under drying conditions in both sensitive and tolerant species, but the activity became non-detectable in the light only in tolerant species due to deactivation of the cyclic electron flow around PSI and of the back reaction in PSI. Light-induced non-photochemical quenching (NPQ) was found to be induced not only by the xanthophyll cycle but also by a DeltapH-induced, dithiothreitol-insensitive mechanism in both the desiccation-tolerant and -intolerant bryophytes. Both mechanisms are thought to have an important role in protecting desiccation-tolerant species from photoinhibition under drying conditions. Fluorescence emission spectra at 77K showed that dehydration-induced quenching of PSII fluorescence was observed only in tolerant species and was due to neither state 1-state 2 transition nor detachment of light-harvesting chlorophyll protein complexes from PSII core complexes. The presence of dehydration-induced quenching of PSI fluorescence was also suggested.

  19. Photoprotective capacity of non-photochemical quenching in plants acclimated to different light intensities.

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    Ware, Maxwell A; Belgio, Erica; Ruban, Alexander V

    2015-12-01

    Arabidopsis plants grown at low light were exposed to a gradually increasing actinic light routine. This method allows for the discerning of the photoprotective component of NPQ, pNPQ and photoinhibition. They exhibited lower values of Photosystem II (PSII) yield in comparison to high-light grown plants, and higher calculated dark fluorescence level (F'o calc.) than the measured one (F'o act.). As a result, in low-light grown plants, the values of qP measured in the dark appeared higher than 1. Normally, F'o act. and F'o calc. match well at moderate light intensities but F'o act. becomes higher at increasing intensities due to reaction centre (RCII) damage; this indicates the onset of photoinhibition. To explain the unusual increase of qP in the dark in low-light grown plants, we have undertaken an analysis of PSII antenna size using biochemical and spectroscopic approaches. Sucrose gradient separation of thylakoid membrane complexes and fast fluorescence induction experiments illustrated that the relative PSII cross section does not increase appreciably with the rise in PSII antenna size in the low-light grown plants. This suggests that part of the increased LHCII antenna is less efficiently coupled to the RCII. A model based upon the existence of an uncoupled population LHCII is proposed to explain the discrepancies in calculated and measured values of F'o.

  20. Exogenous Melatonin Mitigates Photoinhibition by Accelerating Non-photochemical Quenching in Tomato Seedlings Exposed to Moderate Light during Chilling

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    Ding, Fei; Wang, Meiling; Liu, Bin; Zhang, Shuoxin

    2017-01-01

    Melatonin plays an important role in tolerance to multiple stresses in plants. Recent studies have shown that melatonin relieves photoinhibition in plants under cold stress; however, the mechanisms are not fully understood. Non-photochemical quenching (NPQ) is a key process thermally dissipating excess light energy that plants employ as a protective mechanism to prevent the over reduction of photosystem II. Here, we report the effects of exogenous melatonin on NPQ and mitigation of photoinhibition in tomato seedlings exposed to moderate light during chilling. In response to moderate light during chilling, the maximum quantum yield (Fv/Fm) and the effective photochemical efficiency (F′v/F′m) of PSII were both substantially reduced, showing severe photoinhibition in tomato seedlings, whereas exogenous application of melatonin effectively alleviated the photoinhibition. Further experiment showed that melatonin accelerated the induction of NPQ in response to moderate light and maintained higher level of NPQ upon longer exposure to light during chilling. Consistent with the increased NPQ was the elevated de-epoxidation state of xanthophyll pigments in melatonin-pretreated seedlings exposed to light during chilling. Enzyme activity assay showed that violaxanthin de-epoxidase (VDE), which catalyzes the de-epoxidation reaction in the xanthophyll cycle, was activated by light and the activity was further enhanced by application of melatonin. Further analysis revealed that melatonin induced the expression of VDE gene in tomato seedlings under moderate light and chilling conditions. Ascorbic acid is an essential cofactor of VDE and the level of it was found to be increased in melatonin-pretreated seedlings. Feeding tomato seedlings with dithiothreitol, an inhibitor of VDE, blocked the effects of melatonin on the de-epoxidation state of xanthophyll pigments and the induction of NPQ. Collectively, these results suggest that exogenous melatonin mitigates photoinhibition by

  1. Silencing of the violaxanthin de-epoxidase gene in the diatom Phaeodactylum tricornutum reduces diatoxanthin synthesis and non-photochemical quenching.

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    Johann Lavaud

    Full Text Available Diatoms are a major group of primary producers ubiquitous in all aquatic ecosystems. To protect themselves from photooxidative damage in a fluctuating light climate potentially punctuated with regular excess light exposures, diatoms have developed several photoprotective mechanisms. The xanthophyll cycle (XC dependent non-photochemical chlorophyll fluorescence quenching (NPQ is one of the most important photoprotective processes that rapidly regulate photosynthesis in diatoms. NPQ depends on the conversion of diadinoxanthin (DD into diatoxanthin (DT by the violaxanthin de-epoxidase (VDE, also called DD de-epoxidase (DDE. To study the role of DDE in controlling NPQ, we generated transformants of P. tricornutum in which the gene (Vde/Dde encoding for DDE was silenced. RNA interference was induced by genetic transformation of the cells with plasmids containing either short (198 bp or long (523 bp antisense (AS fragments or, alternatively, with a plasmid mediating the expression of a self-complementary hairpin-like construct (inverted repeat, IR. The silencing approaches generated diatom transformants with a phenotype clearly distinguishable from wildtype (WT cells, i.e. a lower degree as well as slower kinetics of both DD de-epoxidation and NPQ induction. Real-time PCR based quantification of Dde transcripts revealed differences in transcript levels between AS transformants and WT cells but also between AS and IR transformants, suggesting the possible presence of two different gene silencing mediating mechanisms. This was confirmed by the differential effect of the light intensity on the respective silencing efficiency of both types of transformants. The characterization of the transformants strengthened some of the specific features of the XC and NPQ and confirmed the most recent mechanistic model of the DT/NPQ relationship in diatoms.

  2. An optimised method for correcting quenched fluorescence yield

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    L. Biermann

    2014-05-01

    Full Text Available Under high light intensity, phytoplankton protect their photosystems from bleaching through non-photochemical quenching processes. The consequence of this is suppression of fluorescence emission, which must be corrected when measuring in situ yield with fluorometers. Previously, this has been done using the limit of the mixed layer, assuming that phytoplankton are uniformly mixed from the surface to this depth. However, the assumption of homogeneity is not robust in oceanic regimes that support deep chlorophyll maxima. To account for these features, we correct from the limit of the euphotic zone, defined as the depth at which light is at ~1% of the surface value. This method was applied to fluorescence data collected by eleven animal-borne fluorometers deployed in the Southern Ocean over four austral summers. Six tags returned data showing evidence of deep chlorophyll features. Using the depth of the euphotic layer, quenching was corrected without masking subsurface fluorescence signals.

  3. Roles of the transthylakoid proton gradient and xanthophyll cycle in the non-photochemical quenching of the green alga Ulva linza

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    Zhang, Xiaowen; Mou, Shanli; Cao, Shaona; Fan, Xiao; Xu, Dong; Ye, Naihao

    2015-09-01

    Non-photochemical quenching (NPQ) is one of the most important photoprotection mechanisms in photosynthetic organisms when they are exposed to excessive irradiation. The basic principle of NPQ, which is the safe dissipation of excessive absorbed light as heat, is identical in all photoautotrophs. However, crucial differences in its regulation and structural mechanisms exist in different phototrophs. Here, we investigated NPQ in the green alga Ulva linza coupled with inhibitors to alter the amplitude of the transthylakoid proton gradient (ΔpH) and/or de-expoxidation of xanthophyll cycle (XC) under high light conditions. The data demonstrates that NPQ started with a rapid initial rise within the first minute of illumination, followed by a decline before a further rise in quenching. During the whole phase, NPQ was triggered and completely controlled by ΔpH, then strengthened and modulated by zeaxanthin. NPQ relaxation was slower in U. linza when compared to plants and other green algae, and it may be mainly caused by the slow conversion of zeaxanthin to violaxanthin. NPQ in U. linza is controlled to a greater extent by XC, which show more similarities to Arabidopsis than to Chlamydomonas and may be an adaptive mechanism for its successful colonization of coastal ecosystems.

  4. Relationship between xanthophyll cycle and non-photochemical quenching in rice (Oryza sativa L.) plants in response to light stress.

    Science.gov (United States)

    Vaz, Janet; Sharma, Prabhat K

    2011-01-01

    Thirty days old rice plants grown under low and moderate light conditions were transferred to full sunlight to observe the extent of photoinhibitory damage and protective mechanism, and the relationship between xanthophyll cycle and nonphotochemical quenching (qN) under changing light environment. Control plants (low, moderate and sun grown) exhibited similar Fv/Fm ratio, indicating similar photosynthetic efficiency prior to light stress. On exposure to the high light treatment, low light grown plants exhibited faster and higher degree of photoinhibition compared to moderate and high light grown plants. Moderate and high light grown plants showed relatively less photoinhibition and also showed higher qN, indicating better capacity of energy dissipation. Increase in qN in moderate light and sun grown plants was accompanied by conversion of violaxanthin (V) to antheraxanthin (A) and zeaxanthin (Z) indicating operation of Z-dependent thermal dissipation. Rice plants fed with ascorbate (AsA), a stimulator of the de-epoxidation state of V to Z, showed higher Fv/Fm ratio and qN than the plants fed with dithiothreitol (DTT) an inhibitor of xanthophyll cycle. This indicated that an increased amount of energy reached PS II reaction centre, due to absence of A and Z formation, thereby causing greater damage to photosynthesis in DTT fed rice plants. The present data confirmed the relationship between qN and Z in dissipating the excess light energy, thereby protecting plants against photodamage.

  5. Integrating transient heterogeneity of non-photochemical quenching in shade-grown heterobaric leaves of avocado (Persea americana L.): responses to CO2 concentration, stomatal occlusion, dehydration and relative humidity.

    Science.gov (United States)

    Takayama, Kotaro; King, Diana; Robinson, Sharon A; Osmond, Barry

    2013-11-01

    Long-lived shade leaves of avocado had extremely low rates of photosynthesis. Gas exchange measurements of photosynthesis were of limited use, so we resorted to Chl fluorescence imaging (CFI) and spot measurements to evaluate photosynthetic electron transport rates (ETRs) and non-photochemical quenching (NPQ). Imaging revealed a remarkable transient heterogeneity of NPQ during photosynthetic induction in these hypostomatous, heterobaric leaves, but was adequately integrated by spot measurements, despite long-lasting artifacts from repeated saturating flashes during assays. Major veins (mid-vein, first- and second-order veins) defined areas of more static large-scale heterogeneous NPQ, with more dynamic small-scale heterogeneity most strongly expressed in mesophyll cells between third- and fourth-order veins. Both responded to external CO2 concentration ([CO2]), occlusion of stomata with Vaseline™, leaf dehydration and relative humidity (RH). We interpreted these responses in terms of independent behavior of stomata in adjacent areoles that was largely expressed through CO2-limited photosynthesis. Heterogeneity was most pronounced and prolonged in the absence of net CO2 fixation in 100 p.p.m. [CO2] when respiratory and photorespiratory CO2 cycling constrained the inferred ETR to ~75% of values in 400 or 700 p.p.m. [CO2]. Likewise, sustained higher NPQ under Vaseline™, after dehydration or at low RH, also restricted ETR to ~75% of control values. Low NPQ in chloroplast-containing cells adjacent to major veins but remote from stomata suggested internal sources of high [CO2] in these tissues.

  6. Arbuscular mycorrhizal symbiosis ameliorates the optimum quantum yield of photosystem II and reduces non-photochemical quenching in rice plants subjected to salt stress.

    Science.gov (United States)

    Porcel, Rosa; Redondo-Gómez, Susana; Mateos-Naranjo, Enrique; Aroca, Ricardo; Garcia, Rosalva; Ruiz-Lozano, Juan Manuel

    2015-08-01

    Rice is the most important food crop in the world and is a primary source of food for more than half of the world population. However, salinity is considered the most common abiotic stress reducing its productivity. Soil salinity inhibits photosynthetic processes, which can induce an over-reduction of the reaction centres in photosystem II (PSII), damaging the photosynthetic machinery. The arbuscular mycorrhizal (AM) symbiosis may improve host plant tolerance to salinity, but it is not clear how the AM symbiosis affects the plant photosynthetic capacity, particularly the efficiency of PSII. This study aimed at determining the influence of the AM symbiosis on the performance of PSII in rice plants subjected to salinity. Photosynthetic activity, plant gas-exchange parameters, accumulation of photosynthetic pigments and rubisco activity and gene expression were also measured in order to analyse comprehensively the response of the photosynthetic processes to AM symbiosis and salinity. Results showed that the AM symbiosis enhanced the actual quantum yield of PSII photochemistry and reduced the quantum yield of non-photochemical quenching in rice plants subjected to salinity. AM rice plants maintained higher net photosynthetic rate, stomatal conductance and transpiration rate than nonAM plants. Thus, we propose that AM rice plants had a higher photochemical efficiency for CO2 fixation and solar energy utilization and this increases plant salt tolerance by preventing the injury to the photosystems reaction centres and by allowing a better utilization of light energy in photochemical processes. All these processes translated into higher photosynthetic and rubisco activities in AM rice plants and improved plant biomass production under salinity.

  7. Simple replacement of violaxanthin by zeaxanthin in LHC-II does not cause chlorophyll fluorescence quenching.

    Science.gov (United States)

    Dreuw, Andreas; Wormit, Michael

    2008-03-01

    Recently, a mechanism for the energy-dependent component (qE) of non-photochemical quenching (NPQ), the fundamental photo-protection mechanism in green plants, has been suggested. Replacement of violaxanthin by zeaxanthin in the binding pocket of the major light harvesting complex LHC-II may be sufficient to invoke efficient chlorophyll fluorescence quenching. Our quantum chemical calculations, however, show that the excited state energies of violaxanthin and zeaxanthin are practically identical when their geometry is constrained to the naturally observed structure of violaxanthin in LHC-II. Therefore, since violaxanthin does not quench LHC-II, zeaxanthin should not either. This theoretical finding is nicely in agreement with experimental results obtained by femtosecond spectroscopy on LHC-II complexes containing violaxanthin or zeaxanthin.

  8. Polyamines induce aggregation of LHC II and quenching of fluorescence in vitro.

    Science.gov (United States)

    Tsiavos, Theodoros; Ioannidis, Nikolaos E; Kotzabasis, Kiriakos

    2012-05-01

    Dissipation of excess excitation energy within the light-harvesting complex of Photosystem II (LHC II) is a main process in plants, which is measured as the non-photochemical quenching of chlorophyll fluorescence or qE. We showed in previous works that polyamines stimulate qE in higher plants in vivo and in eukaryotic algae in vitro. In the present contribution we have tested whether polyamines can stimulate quenching in trimeric LHC II and monomeric light-harvesting complex b proteins from higher plants. The tetramine spermine was the most potent quencher and induced aggregation of LHC II trimers, due to its highly cationic character. Two transients are evident at 100 μM and 350 μM for the fluorescence and absorbance signals of LHC II respectively. On the basis of observations within this work, some links between polyamines and the activation of qE in vivo is discussed.

  9. ΔpH-dependent non-photochemical quenching (qE) of excited chlorophylls in the photosystem II core complex of the freshwater cyanobacterium Synechococcus sp PCC 7942.

    Science.gov (United States)

    Stamatakis, Kostas; Papageorgiou, George C

    2014-08-01

    Light-induced and lumen acidity-dependent quenching (qE) of excited chlorophylls (Chl) in vivo has been amply documented in plants and algae, but not in cyanobacteria, using primarily the saturation pulse method of quenching analysis which is applied to continuously illuminated samples. This method is unsuitable for cyanobacteria because the background illumination elicits in them a very large Chl a fluorescence signal, due to a state 2 to state 1 transition, which masks fluorescence changes due to other causes. We investigated the qE problem in the cyanobacterium Synechococcus sp. PCC 7942 using a kinetic method (Chl a fluorescence induction) with which qE can be examined before the onset of the state 2 to state 1 transition and the attendant rise of Chl a fluorescence. Our results confirm the existence of a qE mechanism that operates on excited Chls a in Photosystem II core complexes of cyanobacteria.

  10. Fluorescence quenching of TMR by guanosine in oligonucleotides

    Institute of Scientific and Technical Information of China (English)

    2009-01-01

    Nucleotide-specific fluorescence quenching in fluorescently labeled DNA has many applications in biotechnology. We have studied the inter-and intra-molecular quenching of tetramethylrhodamine (TMR) by nucleotides to better understand their quenching mechanism and influencing factors. In agreement with previous work, dGMP can effectively quench TMR, while the quenching of TMR by other nucleotides is negligible. The Stern-Volmer plot between TMR and dGMP delivers a bimolecular quenching constant of Ks=52.3 M-1. The fluorescence of TMR in labeled oligonucleotides decreases efficiently through photoinduced electron transfer by guanosine. The quenching rate constant between TMR and guanosine was measured using fluorescence correlation spectroscopy (FCS). In addition, our data show that the steric hindrance by bases around guanosine has significant effect on the G-quenching. The availability of these data should be useful in designing fluorescent oligonucleotides and understanding the G-quenching process.

  11. Reductive fluorescence quenching of DMP with aniline

    Energy Technology Data Exchange (ETDEWEB)

    Asha Jhonsi, M. [B.S. Abdur Rahman University, Vandalur, Chennai 600048, Tamil Nadu (India); Kathiravan, A., E-mail: akathir23@hotmail.com [National Centre for Ultrafast Processes, University of Madras, Taramani Campus, Chennai 600113, Tamil Nadu (India)

    2014-01-15

    The photoinduced electron transfer (PET) between 8-(4-methoxyphenyl)-3,5-di[(E)-1-(4-methoxyphenyl)methylidene]-1,2,3,5,6, 7-hexahydrodicyclopenta[b,e]pyridine (DMP) and aniline is studied in acetonitrile medium by using steady state and time resolved absorption and fluorescence spectroscopic methods. Bimolecular quenching rate constants (k{sub q}) were calculated from the obtained linear Stern–Volmer plots from both steady state and time resolved measurements. The rate constant (k{sub q}) for PET between DMP and aniline is 1.4×10{sup 10} M{sup −1} s{sup −1}, which is in diffusion control limit. The free energy change (ΔG{sup 0}) has been evaluated by using Rehm–Weller equation for the evidence of electron transfer from aniline to DMP. Direct evidence for the electron transfer reaction in the present system has been obtained by characterizing the aniline cation radical using nanosecond time resolved absorption measurements in the visible region. Further, this quenching mechanism is attributed to be reductive in nature i.e. electron transfer occurs from ground state aniline to excited DMP. This is the first example of reductive fluorescence quenching of DMP with aniline in acetonitrile ever known. -- Highlights: • Photoinduced electron transfer between DMP and aniline using time resolved absorption and fluorescence spectroscopy has been investigated. • Reductive quenching behavior was observed. • Direct evidence for the ET reaction in the present system has been obtained by characterizing the aniline cation radical.

  12. Quenching of fluorescence in membrane protein by hypocrellin B.

    Science.gov (United States)

    Yue, J; Pang, S

    1997-04-01

    The hypocrellin B (HB) was used as a fluorescence quencher to study the basic physical charactcristics of HB in membrane systems, including the diffusion speed of quencher from aqueous phase into membrane phase, the partition coefficient (P) of quenchtr between membrane and water, and the fluorescence quenching constant of protein (K(sv); K(q),). The experimental results show that the quenching of fluorescence in membrane protein by HB can be determined by the principle of dynamic quenching. The experimental process of fluorescence quenching was observed in detail by using the ESR technique. The signal of HB- was found to arise from an electron transfer from excited trytophan to HB.

  13. Quenching of fluorescence in membrane protein by hypocrellin B

    Institute of Scientific and Technical Information of China (English)

    乐加昌; 庞素珍

    1997-01-01

    The hypocrellin B (HB) was used as a fluorescence quencher to study the basic physical characteris-tics of HB in membrane systems, including the diffusion speed of quencher from aqueous phase into membrane phase, the partition coefficient (P) of quencher between membrane and water, and the fluorescence quenching constant of protein (Ksv; Kq). The experimental results show that the quenching of fluorescence in membrane protein by HB can be determined by the principle of dynamic quenching. The experimental process of fluorescence quenching was ob-served in detail by using the ESR technique. The signal of HB" was found to arise from an electron transfer from ex-cited trytophan to HB.

  14. Thermal quenching of fluorescence in condensed media

    Science.gov (United States)

    Lagos, Miguel; Paredes, Rodrigo

    2016-09-01

    Environmental factors strongly affect the features of the electromagnetic spectra of fluorescent compounds hosted by material media. The shape of the absorption and emission peaks, their characteristic asymmetry and breadth, the Stokes shift and quantum yield are generally temperature dependent and heavily influenced by both the local and extended physical properties of the medium. The theoretical method used before to obtain the lineshape function is extended here to other terms of the interaction energy between the optically sensitive orbital and the hosting medium, which become significant when the spectral feature is broad. An analytical expression for the temperature dependent decay rate by non-radiative processes is obtained by this way. Comparison with experiment on thermal quenching gives agreement within the experimental uncertainty. The solvent polarity, its protic or aprotic character, hydrogen bonds, proximity effects and presence of quenchers are expected to enter through the coupling constants of the corresponding energy terms.

  15. Anthracene Fluorescence Quenching by a Tetrakis (Ketocarboxamide Cavitand

    Directory of Open Access Journals (Sweden)

    Tibor Zoltan Janosi

    2014-01-01

    Full Text Available Quenching of both fluorescence lifetime and fluorescence intensity of anthracene was investigated in the presence of a newly derived tetrakis (ketocarboxamide cavitand at various concentrations. Time-correlated single photon counting method was applied for the lifetime measurements. A clear correlation between the fluorescence lifetime of anthracene as a function of cavitand concentration in dimethylformamide solution was observed. The bimolecular collisional quenching constant was derived from the decrease of lifetime. Fluorescence intensity was measured in the emission wavelength region around 400 nm as a result of excitation at 280 nm. Effective quenching was observed in the presence of the cavitand. The obtained Stern-Volmer plot displayed upward curvature. The results did not follow even extended Stern-Volmer behavior, often used to describe deviations from static bimolecular quenching. To explain our results we adopted the Smoluchowski model and obtained a reasonable estimate for the molecular radius of the cavitand in solution.

  16. Time-resolved spectroscopy of the fluorescence quenching of a donor — acceptor pair by halothane

    Science.gov (United States)

    Sharma, A.; Draxler, S.; Lippitsch, M. E.

    1992-04-01

    Donor (anthracene) sensitized acceptor (perylene) fluorescence is quenched more efficiently by halothane than is intrinsic perylene fluorescence. The underlying process of dynamic fluorescence quenching is investigated by time-resolved fluorescence spectroscopy.

  17. Plasmonic Molecular Nanohybrids—Spectral Dependence of Fluorescence Quenching

    Directory of Open Access Journals (Sweden)

    Maria Olejnik

    2012-01-01

    Full Text Available We demonstrate strong spectral dependence of the efficiency of fluorescence quenching in molecular systems composed of organic dyes and gold nanoparticles. In order to probe the coupling with metallic nanoparticles we use dyes with varied spectral overlap between the plasmon resonance and their absorption. Hybrid molecular structures were obtained via conjugation of metallic nanoparticles with the dyes using biotin-streptavidin linkage. For dyes featuring absorption above the plasmon excitation in gold nanoparticles, laser excitation induces minute changes in the fluorescence intensity and its lifetime for both conjugated and non-conjugated mixtures, which are the reference. In contrast, when the absorption of the dye overlaps with the plasmon resonance, the effect is quite dramatic, reaching 85% and 95% fluorescence quenching for non-conjugated and conjugated mixtures, respectively. The degree of fluorescence quenching strongly depends upon the concentration of metallic nanoparticles. Importantly, the origin of the fluorescence quenching is different in the case of the conjugated mixture, as evidenced by time-resolved fluorescence. For conjugated mixtures of dyes resonant with plasmon, excitation features two-exponential decay. This is in contrast to the single exponential decay measured for the off-resonant configuration. The results provide valuable insight into spectral dependence of the fluorescence quenching in molecular assemblies involving organic dyes and metallic nanoparticles.

  18. Measurement of cell volume changes by fluorescence self-quenching

    DEFF Research Database (Denmark)

    Hamann, Steffen; Kiilgaard, J.F.; Litman, Thomas

    2002-01-01

    At high concentrations, certain fluorophores undergo self-quenching, i.e., fluorescence intensity decreases with increasing fluorophore concentration. Accordingly, the self-quenching properties can be used for measuring water volume changes in lipid vesicles. In cells, quantitative determination...... of water transport using fluorescence self-quenching has been complicated by the requirement of relatively high (mM) and often toxic loading concentrations. Here we report a simple method that uses low (muM) loading concentrations of calcein-acetoxymethyl ester (calcein-AM) to obtain intracellular...... concentrations of the fluorophore calcein suitable for measurement of changes in cell water volume by self-quenching. The relationship between calcein fluorescence intensity, when excited at 490 nm (its excitation maximum), and calcein concentration was investigated in vitro and in various cultured cell types...

  19. Fluorescence self-quenching of tetraphenylporphyrin in liquid medium

    Energy Technology Data Exchange (ETDEWEB)

    Ghosh, Mihir [Integrated Science Education and Research Centre, Siksha-Bhavana, Visva-Bharati, Santiniketan 731235 (India); Nath, Sukhendu [Radiation and Photochemistry Division, Bhabha Atomic Research Centre, Trombay, Mumbai 400085 (India); Hajra, Alakananda [Department of Chemistry, Siksha-Bhavana, Visva-Bharati, Santiniketan 731235 (India); Sinha, Subrata, E-mail: subratasinha67@rediffmail.com [Integrated Science Education and Research Centre, Siksha-Bhavana, Visva-Bharati, Santiniketan 731235 (India)

    2013-09-15

    Self-quenching of the fluorescence emission of tetraphenylporphyrin at high concentrations in toluene at the ambient temperature (300 K) is discussed in detail based on steady state and time-resolved fluorescence measurements. The fluorescence self-quenching is mainly attributed to re-absorption effect and the Förster type resonance energy transfer process (homotransfer). The re-absorption effect is found to deform the fluorescence emission spectra significantly in energy positions as well as relative intensities of different peaks at high concentrations. Nearly ideal fluorescence emission spectra are observed at a concentration ∼10{sup −7} mol/L. Moreover, there is an apparent enhancement of the fluorescence lifetime value of tetraphenylporphyrin in toluene at high concentrations, especially on the blue side of the fluorescence emission spectra. To the best knowledge of the authors, this is the first detail report on the fluorescence self-quenching of porphyrins in liquid medium. This finding carries great importance in view of the widespread research on porphyrins in the fields of solar light harvesting, artificial photosynthesis, photodynamic therapy, etc. -- Highlights: • The effect of concentration on the fluorescence emission spectra of tetraphenylporphyrin (TPhP) in toluene at 300 K is investigated by using steady state and time-resolved fluorescence techniques. • Both re-absorption effect and the Förster type resonance energy transfer are found to be responsible for the observed fluorescence self-quenching at high concentrations. • These investigations are extremely important in view of the extensive applications of porphyrins in the fabrication of molecular electronic devices, especially for solar and artificial photosynthetic devices, where highly concentrated porphyrins are often used for efficient light harvesting.

  20. Thermodynamic analysis of fluorescence enhancement and Quenching theory equations

    Institute of Scientific and Technical Information of China (English)

    Manman YANG; Xiaoli XI; Pin YANG

    2008-01-01

    The action of the three kinds of new third generation cephalosporin,class drugs,cefepime hydrochroride,cefpiramide and ceftizoxime with HSA and BSA was studied at different temperatures through the fluorescence method. First,the binding constants were calculated by using fluorescence quenching and enhancement theoretical equations. Their thermodynamic functions were also calculated. Because the KA corresponding to the different theoretical equations are not completely the same,the thermodynamic parameters calculated are also different. In this paper,the differences among these thermodynamic data obtained from the different theoretical equations were analyzed and the results show that the thermodynamic data deduced from fluorescence enhancement are more reasonable. Thus,we propose that even when the fluorescence quenching action of the acceptorsubstrate is studied,more realistic data can be obtained by using the fluorescence enhancement equation.

  1. Quenching of chlorophyll fluorescence induced by silver nanoparticles

    Science.gov (United States)

    Queiroz, A. M.; Mezacasa, A. V.; Graciano, D. E.; Falco, W. F.; M'Peko, J.-C.; Guimarães, F. E. G.; Lawson, T.; Colbeck, I.; Oliveira, S. L.; Caires, A. R. L.

    2016-11-01

    The interaction between chlorophyll (Chl) and silver nanoparticles (AgNPs) was evaluated by analyzing the optical behavior of Chl molecules surrounded by different concentrations of AgNPs (10, 60, and 100 nm of diameter). UV-Vis absorption, steady state and time-resolved fluorescence measurements were performed for Chl in the presence and absence of these nanoparticles. AgNPs strongly suppressed the Chl fluorescence intensity at 678 nm. The Stern-Volmer constant (KSV) showed that fluorescence suppression is driven by the dynamic quenching process. In particular, KSV was nanoparticle size-dependent with an exponential decrease as a function of the nanoparticle diameter. Finally, changes in the Chl fluorescence lifetime in the presence of nanoparticles demonstrated that the fluorescence quenching may be induced by the excited electron transfer from the Chl molecules to the metal nanoparticles.

  2. Siloxanes with Pendent Naphtalene Diimides: Synthesis and Fluorescence Quenching

    NARCIS (Netherlands)

    Ganesan, P.; Lagen, van B.; Marcelis, A.T.M.; Sudhölter, E.J.R.; Zuilhof, H.

    2007-01-01

    Cyclic siloxanes with pendent naphthalene diimide groups were synthesized via hydrosilylation to form amorphous electron-accepting compounds. Photophysical measurements and >99.9% fluorescence quenching of well-known p-type polymers by the siloxanes demonstrate that these siloxanes form a new cla

  3. Ionic quenching of naphthalene fluorescence in sodium dodecyl sulfate micelles.

    Science.gov (United States)

    Silva, Alessandra F; Fiedler, Haidi D; Nome, Faruk

    2011-03-31

    Micellar effects on luminescense of organic compounds or probes are well established, and here we show that quenching is highly favored in aqueous sodium dodecyl sulfate (SDS) micelles, which concentrate a naphthalene probe and cations of lanthanides, transition metals, and noble metals. Interactions have been studied by steady state and time-resolved fluorescence in examining the fluorescence suppression of naphthalene by metal ions in anionic SDS micelles. The quenching is collisional and correlated with the unit charge and the reduction potential of the metal ion. The rate constants, calculated in terms of local metal ion concentrations, are close to the diffusion control limit in the interior of SDS micelles, where the microscopic viscosity decreases the transfer rate, following the Stokes-Einstein relation.

  4. Intermolecular-charge-transfer-induced fluorescence quenching in protic solvent

    Science.gov (United States)

    Lin, Tao; Liu, Xiaojun; Lou, Zhidong; Hou, Yanbing; Teng, Feng

    2016-11-01

    The fluorescence quenching of fluorenone in protic solvent has been extensively investigated, and the intermolecular hydrogen bond was found to play a crucial role. Unfortunately, the mechanism at atomic level is still not clear. In the present work, we theoretically put forward the charge transfer along the hydrogen bond in the excited states. The vertical excitation energies of the fluorenone-methanol complex as well as the potential energy profiles and surfaces of the vertical excited states and charge transfer states were calculated by using the ab initio electronic-structure methods. The photochemical reactions occurring in the diverse charge transfer states were compared and their decisiveness to the fluorescence quenching was discussed in the paper.

  5. Neodymium Fluorescence Quenching by Hydroxyl Groups in Phosphate Laser Glasses

    Energy Technology Data Exchange (ETDEWEB)

    Ehrmann, P R; Carlson, K; Campbell, J H; Click, C A; Brow, R K

    2003-09-02

    Non-radiative losses due to OH fluorescence quenching of the Nd{sup 3+} {sup 4}F{sub 3/2} state are quantified over a range of OH concentrations from 4 x 10{sup 18}/cm{sup 3} to 4 x 10{sup 20}/cm{sup 3} and Nd doping levels from 0.4 to 9 x 10{sup 20}/cm{sup 3} in two K{sub 2}O-MgO-Al{sub 2}O{sub 3}-P{sub 2}O{sub 5} metaphosphate glasses having different K/Mg ratios ({approx}1/1 and 2/1). The quenching rate is found to vary linearly with the Nd and OH concentrations as predicted by Forster-Dexter theory. However, in contrast to theory the OH quenching rate extrapolates to a non-zero value at low Nd{sup 3+} doping levels. It is proposed that at low Nd{sup 3+} concentrations the OH is correlated with Nd sites in the glass. The quenching strength of OH on a per ion basis is found to be weak compared to other common transition metal impurities (e.g. Fe{sup 2+}, Co{sup 2+}, Ni{sup 2+}, Cu{sup 2+}). Nevertheless, OH dominates the Nd quenching in phosphate glass because under most processing conditions OH is present at concentrations 10{sup 2} to 10{sup 3} greater than transition metal ion impurities. A correlation of the quenching strength of OH and common metal impurity ions with the degree of spectral overlap of the impurity absorption bands and the four {sup 4}F{sub 3/2} to {sup 4}I{sub J} transitions shows good agreement.

  6. Photophysical behavior and fluorescence quenching by halides of quinidine dication: Steady state and time resolved study

    Energy Technology Data Exchange (ETDEWEB)

    Joshi, Neeraj Kumar; Tewari, Neeraj; Arora, Priyanka; Rautela, Ranjana; Pant, Sanjay [Photophysics Laboratory, Department of Physics, DSB Campus, Kumaun University, Nainital 263002, Uttarakhand (India); Joshi, Hem Chandra, E-mail: hem_sup@yahoo.co.uk [Institute for Plasma Research, Laser Diagnostics Division, Bhat, Near Indira Bridge, Gandhinagar 382428, Gujarat (India)

    2015-02-15

    The fluorescence quenching of quinidine in acidified aqueous solution by various halides (Cl{sup −}, Br{sup −} and I{sup −}) was studied using steady state and time resolved fluorescence techniques. The quenching process was characterized by Stern–Volmer (S–V) plots. Possibility of conformers (one is not quenched by halide and the other is quenched) is invoked to explain the observed results. - Highlights: • Fluorescence quenching of quinidine in acidified aqueous solution by halides. • Various quenching parameters have been estimated. • Possibility of conformers is invoked to explain the observed results.

  7. Radioactivity-synchronized fluorescence enhancement using a radionuclide fluorescence-quenched dye.

    Science.gov (United States)

    Berezin, Mikhail Y; Guo, Kevin; Teng, Bao; Edwards, W Barry; Anderson, Carolyn J; Vasalatiy, Olga; Gandjbakhche, Amir; Griffiths, Gary L; Achilefu, Samuel

    2009-07-08

    We demonstrate the first evidence of radioactivity-synchronized fluorescence quenching of a near-infrared light-emitting dye by a radionuclide, (64)Cu, and subsequent fluorescence enhancement upon (64)Cu decay to the daughter isotopes (64)Ni and (64)Zn. The dynamic switch from high radioactivity and low fluorescence to low radioactivity and high fluorescence is potentially useful for developing complementary multimodal imaging and detection platforms for chemical, environmental, and biomedical applications as well as for unraveling the mechanisms of metal-induced dynamic fluorescence changes.

  8. Combined Quenching Mechanism of Anthracene Fluorescence by Cetylpyridinium Chloride in Sodium Dodecyl Sulfate Micelles.

    Science.gov (United States)

    Soemo, Angela R; Pemberton, Jeanne E

    2014-03-01

    The Stern-Volmer quenching constant (KSV) for quenching of anthracene fluorescence in sodium dodecyl sulfate (SDS) micelles by pyridinium chloride has been reported previously to be 520 M(-1) based on steady state fluorescence measurements. However, such measurements cannot distinguish static versus dynamic contributions to the overall quenching. In the work reported here, the quenching dynamics of anthracene in SDS micelles by cetylpyridinium chloride (CPC), an analogue of pyridinium chloride, were investigated using both steady state and time resolved fluorescence quenching. Concurrent measurement of the decrease in fluorescence intensity and lifetime of anthracene provide a quantitative evaluation of collision induced (i.e. dynamic) versus complex formation (i.e. static) quenching of the anthracene fluorophore. The results reveal that a combined quenching mechanism is operative with approximately equal constants of 249 ± 6 M(-1) and 225 ± 12 M(-1) for dynamic and static quenching, respectively.

  9. Mechanism of fluorescence quenching of tyrosine derivatives by amide group

    Science.gov (United States)

    Wiczk, Wiesław; Rzeska, Alicja; Łukomska, Joanna; Stachowiak, Krystyna; Karolczak, Jerzy; Malicka, Joanna; Łankiewicz, Leszek

    2001-06-01

    The difference between fluorescence lifetimes of the following amino acids: phenylalanine (Phe), tyrosine (Tyr), ( O-methyl)tyrosine (Tyr(Me)), (3-hydroxy)tyrosine (Dopa), (3,4-dimethoxy)phenylalanine (Dopa(Me) 2) and their amides was used to testify the mechanism of fluorescence quenching of aromatic amino acids by the amide group. On the basis of the Marcus theory of photoinduced electron transfer parabolic relationships between ln kET and ionization potentials reduced by energy of excitation ( IP-E ∗0,0) for the above-mentioned amino acids were obtained. This finding indicates the occurrence of photoinduced electron transfer from the excited chromophore group to the amide group.

  10. Fluorescence Quenching of Benzaldehyde in Water by Hydrogen Atom Abstraction.

    Science.gov (United States)

    Fletcher, Katharyn; Bunz, Uwe H F; Dreuw, Andreas

    2016-09-01

    We computed the mechanism of fluorescence quenching of benzaldehyde in water through relaxed potential energy surface scans. Time-dependent density functional theory calculations along the protonation coordinate from water to benzaldehyde reveal that photoexcitation to the bright ππ* (S3 ) state is immediately followed by ultrafast decay to the nπ* (S1 ) state. Evolving along this state, benzaldehyde (BA) abstracts a hydrogen atom, resulting in a BAH(.) and OH(.) radical pair. Benzaldehyde does not act as photobase in water, but abstracts a hydrogen atom from a nearby solvent molecule. The system finally decays back to the ground state by non-radiative decay and an electron transfers back to the OH(.) radical. Proton transfer from BAH(+) to OH(-) restores the initial situation, BA in water.

  11. Dynamic fluorescence quenching of quinine sulfate dication by chloride ion in ionic and neutral micellar environments

    Science.gov (United States)

    Joshi, Sunita; Varma Y, Tej Varma; Pant, Debi D.

    2014-04-01

    Fluorescence quenching of Quinine sulfate dication (QSD) by chloride-ion (Cl-) in micellar environments of anionic, sodium dodecyl sulfate (SDS), cationic, cetyltrimethylammonium bromide (CTAB) and neutral, triton X-100 (TX-100) in aqueous phase has been investigated by time-resolved and steady- state fluorescence measurements. The quenching follows linear Stern-Volmer relation in micellar solutions and is dynamic in nature.

  12. Protein immobilization and fluorescence quenching on polydopamine thin films.

    Science.gov (United States)

    Chen, Daqun; Zhao, Lei; Hu, Weihua

    2016-09-01

    Mussel inspired polydopamine (PDA) film has attracted great interest as a versatile functional coating for biomolecule immobilization in various bio-related devices. However, the details regarding the interaction between a protein and PDA film remain unclear. Particularly, there is very limited knowledge regarding the protein immobilization on PDA film, even though it is of essential importance in various fields. The situation is even more complicated if considering the fact that quite a number of approaches (e.g., different oxidizing reagent, buffer pH, grown time, grown media, etc.) have been developed to grow PDA films. In this work, protein attachment on PDA film was systematically investigated by using the real-time and label-free surface plasmon resonance (SPR) technique. The kinetics of protein-PDA interaction was explored and the influence of buffer pH and deposition media on the protein attachment was studied. Fluorescent protein microarray was further printed on PDA-coated glass slides for quantitative investigations and together with SPR data, the interesting fluorescence quenching phenomenon of PDA film was revealed. This work may deepen our understanding on the PDA-protein interaction and offer a valuable guide for efficient protein attachment on PDA film in various bio-related applications.

  13. Time-domain imaging with quench-based fluorescent contrast agents

    Science.gov (United States)

    Akers, Walter J.; Solomon, Metasebya; Sudlow, Gail P.; Berezin, Mikhail; Achilefu, Samuel

    2012-03-01

    Quench-based probes utilize unique characteristics of fluorescence resonance energy transfer (FRET) to enhance contrast upon de-quenching. This mechanism has been used in a variety of molecular probes for imaging of cancer related enzyme activity such as matrix metalloproteinases, cathepsins and caspases. While non-fluorescent upon administration, fluorescence can be restored by separation of donor and acceptor, resulting in higher intensity in the presence of activator. Along with decreased quantum yield, FRET also results in altered fluorescence lifetime. Time-domain imaging can further enhance contrast and information yield from quench-based probes. We present in vivo time-domain imaging for detecting activation of quench-based probes. Quench-based probes utilize unique characteristics of fluorescence resonance energy transfer (FRET) to enhance contrast upon de-quenching. This mechanism has been used in a variety of molecular probes for imaging of cancer related enzyme activity such as matrix metalloproteinases, cathepsins and caspases. While non-fluorescent upon administration, fluorescence can be restored by separation of donor and acceptor, resulting in higher intensity in the presence of activator. Along with decreased quantum yield, FRET also results in altered fluorescence lifetime. Time-domain imaging can further enhance contrast and information yield from quench-based probes. We present in vivo time-domain imaging for detecting activation of quench-based probes. Time-domain diffuse optical imaging was performed to assess the FRET and quenching in living mice with orthotopic breast cancer. Tumor contrast enhancement was accompanied by increased fluorescence lifetime after administration of quenched probes selective for matrix metalloproteinases while no significant change was observed for non-quenched probes for integrin receptors. These results demonstrate the utility of timedomain imaging for detection of cancer-related enzyme activity in vivo.

  14. Determination of epristeride by its quenching effect on the fluorescence of L-tryptophan

    Institute of Scientific and Technical Information of China (English)

    Ai-Qin Gong; Xia-Shi Zhu

    2013-01-01

    A rapid, novel spectrofluorimetric method to determine epristeride (EP) in biological fluids and a pharmaceutical formulation was developed, based on the fact that fluorescence intensity of L-tryptophan could be quenched by EP in the medium of pH ¼ 9.0. The various factors influencing fluorescence quenching were discussed. The quenching mechanism was investigated with the quenching type, synchronous fluorescence spectra and quantum efficiency. Under the optimized conditions, fluorescence quenching value (ΔF ¼ FL-tryptophan-FEP-L-tryptophan) showed a good linear relationship with the EP concentration ranging from 0.4 to 12.0μg/mL. The linearity, recovery and limit of detection demonstrated that the proposed method was suitable for EP determination in biological fluids and EP tablets. The method was successfully applied to the analysis of EP in real samples and the obtained results were in good agreement with the results of the official method.

  15. Aspect ratio dependent fluorescence quenching of eosin Y by gold nanorods.

    Science.gov (United States)

    Weng, Guojun; Li, Jianjun; Zhang, Li; Zhao, Junwu

    2014-06-01

    Gold nanorods of different aspect ratios had been synthesized using seed mediated growth method. The formed gold nanorods had been characterized by the absorption and transmission electron microscopy (TEM) measurements. The obtained gold nanorods were used to study the quenched effect on fluorescence of Eosin Y. Experimental results revealed that Eosin Y molecules adsorbed on the metallic surfaces, suffering strong quenching of their fluorescence and the quenching efficiency was different for different aspect ratio. Using dielectric coated gold nanorods model, the probable mechanism of aspect ratio dependent quenching efficiency was obtained by numerical calculation based on fluorescence resonance energy transfer and quasi-static theory. The calculation results showed that the non-monotonic changing of fluorescence quenching was attributed to competing effects of aspect ratio and the dielectric constant of coated shell on surface plasmon resonance.

  16. Assay of ceftazidime and cefepime based on fluorescence quenching of carbon quantum dots.

    Science.gov (United States)

    Huang, Yu; Zhang, Ying; Yan, Zhengyu; Liao, Shenghua

    2015-11-01

    A novel and sensitive method for the determination of ceftazidime and cefepime in an active pharmaceutical ingredient (API) has been developed based on the fluorescence quenching of poly(ethylene glycol) (PEG)2000-capped carbon quantum dots (CQDs) prepared using a chemical oxidation method. The quenching of fluorescence intensity is proportional to the concentration of ceftazidime and cefepime over the range of 0.33-3.30 and 0.24-2.40 µg/mL, respectively. The mode of interaction between PEG2000-capped CQDs and ceftazidime/cefepime in aqueous solutions was investigated using a fluorescence, UV/Vis and Fourier transform infrared spectrometry (FTIR) at physiological pH. UV/Vis and FTIR spectra demonstrated that ground state compounds were formed through hydrophobic interaction the fluorescence quenching of CQDs caused by ceftazidime and cefepime. The quenching constants decreased with increases in temperature, which was consistent with static quenching.

  17. Fluorescence Quenching Study of Zinc Bisporphyrins by Fulleropyrrolidines and Their N-Oxides

    Institute of Scientific and Technical Information of China (English)

    XU Hua; YANG Yi; ZHU Yi-Zhou; ZHENG Jian-Yu

    2006-01-01

    Novel phenylene-bridged zinc bisporphyrins (1-4), fulleropyrrolidines (C60-m, C60-h) and their N-oxides C6o-mo, C60-ho) were synthesized. The fluorescence quenching processes of bisporphyrins in toluene solution by fulleropyrrolidines and their N-oxides were investigated by steady-state fluorescence spectra. The fluorescence quenching constants proved that the fluorescence quenching ability was decreased as reduction of thepyrrolidinefunctionalgroups of fullerene surface: C60-h>C60-m>C60, and the fluorescence quenching ability was increased about 1.3-7.4 times by utilizing fulleropyrrolidine N-oxides (C60-mo, C60-ho) compared to fulleropyrrolidine compounds (C60-m, C60-h). The results revealed photoinduced electron transfer (PET) efficiencybetweenbisporphyrinandfullerenederivativescould be tunable by change of functional groups on fullerene surface.

  18. Interaction of potassium mono and di phosphates with bovine serum albumin studied by fluorescence quenching method.

    Science.gov (United States)

    Bakkialakshmi, S; Shanthi, B; Chandrakala, D

    2011-03-01

    The interactions between potassium mono and di phosphates and bovine serum albumin (BSA) were studied using fluorescence spectroscopy (FS) and ultraviolet spectroscopy (UV). The experimental results showed that the potassium mono and di phosphates could insert into the BSA and quench the inner fluorescence of BSA by forming the potassium mono phosphate-BSA and pottassium di phosphate-BSA complexes. It was found that the static quenching was the main reason leading to the fluorescence quenching. It was conformed by XRD and SEM techniques.

  19. [A fluorescence quenching method for the determination of trace chlorite in water with rhodamine B].

    Science.gov (United States)

    Kang, Cai-yan; Jiang, Zhi-liang; Xi, Dan-li

    2007-02-01

    In acidic sodium acetate-HCl buffer solution containing KI, Rhodamine B (RhB) has a fluorescence peak at 580 nm. When ClO2(-) exists fluorescence quenching occur. The fluorescence quenching intensity is linear with the concentration of ClO2(-) in the range of 0.0218-0.51 microg x mL(-1). Based on this, a new, simple, sentisive fluorescence method has been proposed for the determination of ClO2(-) in water, with satisfactory results.

  20. Fluorescence quenching behaviour of uric acid interacting with water-soluble cationic porphyrin

    Energy Technology Data Exchange (ETDEWEB)

    Makarska-Bialokoz, Magdalena, E-mail: makarska@hektor.umcs.lublin.pl [Department of Inorganic Chemistry, Maria Curie-Sklodowska University M. C. Sklodowska Sq. 2, 20-031 Lublin (Poland); Borowski, Piotr [Faculty of Chemistry, Maria Curie-Sklodowska University M. C. Sklodowska Sq. 3, 20-031 Lublin (Poland)

    2015-04-15

    The process of association between 5,10,15,20-tetrakis[4-(trimethylammonio)phenyl]-21H,23H-porphine tetra-p-tosylate (H{sub 2}TTMePP) and uric acid as well as its sodium salt has been studied in aqueous NaOH solution analysing its absorption and steady-state fluorescence spectra. The fluorescence quenching effect observed during interactions porphyrin-uric acid compounds points at the fractional accessibility of the fluorophore for the quencher. The association and fluorescence quenching constants are of the order of magnitude of 10{sup 5} mol{sup −1}. The fluorescence lifetimes and the quantum yields of the porphyrin anionic form were established. The results demonstrate that uric acid and its sodium salt can interact with H{sub 2}TTMePP at basic pH and through formation of stacking complexes are able to quench its ability to emission. - Highlights: • Association study of water soluble cationic porphyrin with uric acid. • Porphyrin absorption spectra undergo the bathochromic and hypochromic effects. • Uric acid interacts with porphyrin in inhibiting manner, quenching its emission. • Fluorescence quenching effect testifies for the partial inactivation of a porphyrin. • The association and fluorescence quenching constants were calculated.

  1. Fluorescence quenching of fluoroquinolone antibiotics by 4-hydroxy-TEMPO in aqueous solution.

    Science.gov (United States)

    Żamojć, Krzysztof; Wiczk, Wiesław; Zaborowski, Bartłomiej; Makowski, Mariusz; Pranczk, Joanna; Jacewicz, Dagmara; Chmurzyński, Lech

    2014-12-10

    The fluorescence quenching of norfloxacin, danofloxacin, enrofloxacin and levofloxacin, belonging to a group of fluoroquinolone antibiotics, by 4-hydroxy-TEMPO was studied in aqueous solutions with the use of steady-state, time-resolved fluorescence spectroscopy as well as UV-VIS absorption spectroscopy methods. In order to understand the mechanism of quenching the absorption and fluorescence emission spectra of all fluoroquinolone antibiotics studied as well as decreases of their fluorescence were registered as a function of the 4-hydroxy-TEMPO concentration. No deviations from a linearity in the Stern-Volmer plots (determined from both, steady-state and time-resolved measurements) were observed. The fluorescence quenching mechanism was proved to be totally dynamic, what was additionally confirmed by the registration of Stern-Volmer plots at 5 temperatures ranging from 15 to 55°C. On the basis of theoretical calculations of fluoroquinolones' molecular radii and ionization potentials the mechanism of electron transfer was rejected. It seems that the fluorescence quenching is diffusion-limited and is caused by the increase of nonradiative processes, such as internal conversion or intersystem crossing. The Stern-Volmer quenching constants and bimolecular quenching constants were determined at the room temperature for all fluoroquinolone antibiotics studied. Copyright © 2014 Elsevier B.V. All rights reserved.

  2. ZnSe quantum dots based fluorescence quenching method for determination of paeoniflorin

    Energy Technology Data Exchange (ETDEWEB)

    Chen, Zhi [Center of Analysis, Guangdong Medical College, Dongguan 523808 (China); School of Chinese Herbal Medicine, Guangzhou University of Chinese Medicine, Guangzhou 510006 (China); Chen, Jiayi; Liang, Qiaowen [School of Chinese Herbal Medicine, Guangzhou University of Chinese Medicine, Guangzhou 510006 (China); Wu, Dudu [Center of Analysis, Guangdong Medical College, Dongguan 523808 (China); Zeng, Yuaner, E-mail: zengyuaner@126.com [School of Chinese Herbal Medicine, Guangzhou University of Chinese Medicine, Guangzhou 510006 (China); Jiang, Bin, E-mail: gzjiangbin@hotmail.com [School of Chinese Herbal Medicine, Guangzhou University of Chinese Medicine, Guangzhou 510006 (China)

    2014-01-15

    Water soluble ZnSe quantum dots (QDs) modified by mercaptoacetic acid (MAA) were used to determinate paeoniflorin in aqueous solutions by the fluorescence spectroscopic technique. The results showed that the fluorescence of the modified ZnSe QDs could be quenched by paeoniflorin effectively in physiological buffer solution. The optimum fluorescence intensity was found to be at incubation time 10 min, pH 7.0 and temperature 25 °C. Under the optimal conditions, the detection limit of paeoniflorin was 7.30×10{sup −7} mol L{sup −1}. Moreover, the quenching mechanism was discussed to be a static quenching procedure, which was proved by quenching rate constant K{sub q} (1.02×10{sup 13} L mol{sup −1} s{sup −1}). -- Highlights: • The fluorescence intensity of ZnSe QDs could be quenched by paeoniflorin. • Foreign substance showed insignificant effect for determination of paeoniflorin. • The quenching mechanism was discussed to be a static quenching procedure.

  3. Halide (Cl(super -)) Quenching of Quinine Sulfate Fluorescence: A Time-Resolved Fluorescence Experiment for Physical Chemistry

    Science.gov (United States)

    Gutow, Jonathan H.

    2005-01-01

    The time-resolved fluorescence experiment investigating the halide quenching of fluorescence from quinine sulfate in water is described. The objectives of the experiment include reinforcing student understanding of the kinetics of competing pathways, making connections with microscopic theories of kinetics through comparison of experimental and…

  4. Fluorescence quenching in luminescent porous silicon nanoparticles for the detection of intracellular Cu2+.

    Science.gov (United States)

    Xia, Bing; Zhang, Wenyi; Shi, Jisen; Xiao, Shoujun

    2013-07-01

    After microwave-induced hydrosilylation reaction with 10-undecenoic acid, luminescent porous silicon nanoparticles (LPSiNPs) showed excellent fluorescence stability under physiological conditions. Fluorescence quenching in as-prepared LPSiNPs was highly sensitive with the concentration of Cu(2+) at μmol L(-1) level, which could be further applied to the detection of intracellular Cu(2+).

  5. Binding Interaction of Captopril with Metal Ions: A Fluorescence Quenching Study

    Institute of Scientific and Technical Information of China (English)

    SIDDIQI K.S.; BANO Shaista; MOHD Ayaz; KHAN Aslam Aftab Parwaz

    2009-01-01

    The binding interaction of captopril(CPL)with biologically active metal ions Mg2+,Ca2+,Mn2+,Co2+,Ni2+,Cu2+ and Zn2+ was investigated in an aqueous acidic medium by fluorescence spectroscopy.The experimental results showed that the metal ions quenched the intrinsic fluorescence of CPL by forming CPL-metal complexes.It was found that static quenching was the main reason for the fluorescence quenching.The quenching constant in the case of Cu2+ was highest among all quenchers,perhaps due to its high nuclear charge and small size.Quenching of CPL by metal ions follows the order Cu2+> Ni2+> Co2+> Ca2+>Zn2+ > Mn2+ > Mg2+.The quenching constant Ksv,bimolecular quenching constant Kq,binding constant K and the binding sites "n" were determined together with their thermodynamic parameters at 27 and 37℃.The positive entropy change indicated the gain in configurational entropy as a result of chelation.The process of interaction was spontaneous and mainly △S-driven.

  6. Role of formation of statistical aggregates in chlorophyll fluorescence concentration quenching.

    Science.gov (United States)

    Shi, Wu-Jun; Barber, James; Zhao, Yang

    2013-04-18

    Using extensive Monte Carlo simulations, a comprehensive investigation has been carried out on the phenomenon of chlorophyll fluorescence concentration quenching. Our results reveal that statistical aggregations of chlorophylls act mainly as trapping sites for excitation energy and lead to fluorescence quenching. Due to transition dipolar-dipolar interactions between the chlorophylls within a statistical aggregate, the associated oscillator strength changes in comparison to a monomer, and excited energy states show splitting. Further, as the lower energy states are more likely associated with lower oscillator strengths, the fluorescence intensity is observed to decrease. Due to the rapid energy transfer between chlorophyll molecules after photoexcitation, the excitonic energy can easily reach a statistical aggregate, where trapping of the exciton and its subsequent decay occur. With an increase in the chlorophyll concentration, the probability of statistical aggregation increases, thereby accentuating the fluorescence quenching effect.

  7. The fluorescence quenching and resonance Rayleigh scattering enhancement of ET-CPM system

    Institute of Scientific and Technical Information of China (English)

    YANG JiDong; ZHOU Shang

    2009-01-01

    In pH 4.4 BR buffer medium, erythrosine (ET) and Chlorphensmine Maleate (CPM) could form ion-as-sociation complex, which led to the quenching of fluorescence and synchronous fluorescence, and the significant enhancement of resonance Rayleigh scattering(RRS) of erythrosine. Furthermore, a new RRS spectrum would appear, and the maximum RRS wavelength was located at about 578 rim. The quenched fluorescence and enhanced RRS intensity was directly proportional to the concentration of CPM in the ranges of 0.24-8.0 μg/mL, and 0.008-3.6 μg/mL, respectively. The method has been ap-plied to determine CPM in urine samples with satisfactory results. The mechanisms of the RRS en-hancement and fluorescence quenching were discussed as well.

  8. The equal-efficiency-proving of fluorescence quenching and enhancement equation

    Institute of Scientific and Technical Information of China (English)

    YANG Manman; XI Xiaoli; YANG Pin

    2005-01-01

    Through the fluorescence and ultravioletvisible spectrophotometry we have studied the action of cefoperazone sodium and worfloxacin, two kinds of medicinewith albumin, and examined the equal efficiency quality offluorescence enhancement and fluorescence quenching equation. The result shows the equal efficiency of calculating dissociation constant. In this article, we obtain the dissociationconstants of the action of the two kinds of medicine with bovine serum albumin, energy- transfer efficiency, the distanceof donor-acceptor and quenching constants. The above showsthat the action is not caused by dynamic collision but by thebinding of medicine and albumin. This article speciallypoints out that the [Mt]/[Pt], which is the ratio of the maximum mol concentration of the quenching agent (medicine) tofluorescent (albumin) mol concentration when the quenchingends, is very important because it is the maximum bindingnumber of quenching agent molecule to a fluorescent molecule. There is no more quenching after adding more quenching agent beyond this quantity to fluorescent solution. Thisquantity is determined directly and strictly by experiment, sois also of important significance when discussing quenchingefficiency and binding situation of donor-acceptor.

  9. Analysis of fluorescence quenching of coumarin derivatives by 4-hydroxy-TEMPO in aqueous solution.

    Science.gov (United States)

    Żamojć, Krzysztof; Wiczk, Wiesław; Zaborowski, Bartłomiej; Jacewicz, Dagmara; Chmurzyński, Lech

    2014-05-01

    The fluorescence quenching of different coumarin derivatives (7-hydroxy-4-methylcoumarin, 5,7-dimethoxycoumarin, 7-amino-4-methyl-3-coumarinylacetic acid, 7-ethoxy-4-methylcoumarin, 7-methoxycoumarin, 7-hydroxycoumarin, 7-hydroxy-4-methyl-3-coumarinylacetic acid and 7-amino-4-methylcoumarin) by 4-hydroxy-TEMPO in aqueous solutions at the room temperature was studied with the use of UV-Vis absorption spectroscopy as well as a steady-state and time-resolved fluorescence spectroscopy. In order to understand the mechanism of quenching the absorption and fluorescence emission spectra of all coumarins along with fluorescence decays were recorded under the action of 4-hydroxy-TEMPO. The Stern-Volmer plots (both from time-averaged and time-resolved measurements) displayed no positive (upward) deviation from a linearity. The fluorescence quenching mechanism was found to be entirely dynamic, what was additionally confirmed by the registration of Stern-Volmer plots at different temperatures. The Stern-Volmer quenching constants and bimolecular quenching rate constants were obtained for all coumarins studied at the room temperature. The findings demonstrate the possibility of developing an analytical method for the quantitative determination of the free radicals' scavenger, 4-hydroxy-TEMPO.

  10. Fluorescence quenching of fluoroquinolones by gold nanoparticles with different sizes and its analytical application

    Energy Technology Data Exchange (ETDEWEB)

    Amjadi, Mohammad, E-mail: amjadi@tabrizu.ac.ir; Farzampour, Leila

    2014-01-15

    The interaction of some fluoroquinolones including norfloxacin, ciprofloxacin, danofloxacin and ofloxacin with gold nanoparticles (AuNPs) of different sizes (8, 20 and 75 nm) was studied. In the studied systems, fluoroquinolones are noncovalently adsorbed onto the surface of AuNPs, which results in severe quenching of fluoroquinolones fluorescence possibly as a result of fluorescence resonance energy transfer. Stern–Volmer quenching constants were obtained and found to increase with an increase in the size of AuNPs. Moreover, the interactions between some thiols and fluoroquinolone-adsorbed AuNPs were investigated to explore the analytical applicability of the systems. It was found that upon the addition of thiols to fluoroquinolone-AuNPs systems the fluorescence of fluoroquinolones switches to “turn-on” due to the strong binding of thiols to AuNPs and removal of quinolines from NP surface. Under the optimum conditions, the fluorescence enhancement showed a linear relationship with the concentration of thiols, indicating the analytical usefulness of the system. -- Highlights: • Interaction of fluoroquinolones with AuNPs of different sizes was investigated. • The fluorescence of fluoroquinolones is efficiently quenched by AuNPs. • The fluorescence quenching efficiency increases by increasing NP size. • Fluoroquinolone-AuNPs systems can be used as sensitive turn-on sensors for thiols. • Danofloxacin-20-nm AuNPs system exhibits the highest sensitivity for thiols.

  11. Determination of torasemide by fluorescence quenching method with some dihalogenated fluorescein dyes as probes

    Science.gov (United States)

    Cui, Zhiping; Liu, Shaopu; Liu, Zhongfang; Li, Yuanfang; Hu, Xiaoli; Tian, Jing

    2013-10-01

    A novel fluorescence quenching method for the determination of torasemide (TOR) with some dihalogenated fluorescein dyes as fluorescence probes was developed. In acidulous medium, TOR could interact with some dihalogenated fluorescein dyes such as dichlorofluorescein (DCF), dibromofluorescein (DBF) and diiodofluorescein (DIF) to form binary complexes, which could lead to fluorescence quenching of above dihalogenated fluorescein dyes. The maximum fluorescence emission wavelengths were located at 532 nm (TOR-DCF), 535 nm (TOR-DBF) and 554 nm (TOR-DIF). The relative fluorescence intensities (ΔF = F0 - F) were proportional to the concentration of TOR in certain ranges. The detection limits were 4.8 ng mL-1 for TOR-DCF system, 9.8 ng mL-1 for TOR-DBF system and 35.1 ng mL-1 for TOR-DIF system. The optimum reaction conditions, influencing factors were studied; and the effect of coexisting substances was investigated owing to the highest sensitivity of TOR-DCF system. In addition, the reaction mechanism, composition and structure of the complex were discussed by quantum chemical calculation and Job's method. The fluorescence quenching of dihalogenated fluorescein dyes by TOR was a static quenching process judging from the effect of temperature and the Stern-Volmer plots. The method was satisfactorily applied to the determination of TOR in tablets and human urine samples.

  12. Mechanisms of Fluorescence Quenching of Pr3+-Doped PbWO4 Crystal

    Institute of Scientific and Technical Information of China (English)

    Xiong Feibing; Luo Zundu; Huang Yidong

    2005-01-01

    Fluorescence decay curves of the 3P0 and 1D2 manifolds in Pr3+ doped PbWO4 crystal were measured at room temperature and fluorescence lifetimes of both manifolds were estimated. Combining with the radiative lifetimes of the manifolds calculated on the basis of the modified J-O theory, the main mechanisms for the fluorescence quenching of the manifolds were analyzed. The multi-phonon relaxation and the cross-relaxation energy transfer are the major reasons for the fluorescence quenching of the 3P0 and 1D2 manifolds, respectively. The Inokuti-Hirayama model was used to analyze the fluorescence decay curve of the 1D2 manifold and the cross-relaxation of dipole-dipole interaction was confirmed. Consequently, the 3P0 manifold is more favorable as an upper laser level than the 1D2 manifold.

  13. Optical sensing of peroxide using ceria nanoparticles via fluorescence quenching technique

    Science.gov (United States)

    Shehata, Nader; Samir, Effat; Gaballah, Soha; Salah, Mohammed

    2016-07-01

    This study introduces the application of ceria nanoparticles (NPs) as an optical sensor for peroxide using fluorescence quenching technique. Our synthesized ceria NPs have the ability to adsorb peroxides via its oxygen vacancies. Ceria NPs solution with added variable concentrations of hydrogen peroxides is exposed through near-UV excitation and the detected visible fluorescent emission is found to be at ˜520 nm. The fluorescent intensity peak is found to be reduced with increasing the peroxide concentrations due to static fluorescence quenching technique. The relative intensity change of the visible fluorescent emission has been reduced to more than 50% at added peroxide concentrations up to 10 wt. %. In order to increase ceria peroxides sensing sensitivity, lanthanide elements such as samarium (Sm) are used as ceria NPs dopant. This research work could be applied further in optical sensors of radicals in biomedical engineering and environmental monitoring.

  14. Binding phenomena and fluorescence quenching. II: Photophysics of aromatic residues and dependence of fluorescence spectra on protein conformation

    Science.gov (United States)

    Callis, Patrik R.

    2014-12-01

    The three amino acids with aromatic ring side chains-phenylalanine (Phe), tyrosine (Tyr), and especially tryptophan (Trp) have played a long and productive role in helping unlock the secrets of protein behavior by optical spectroscopy (absorption, fluorescence, circular dichroism, etc.) In principle, an appropriately placed Trp will undergo fluorescence wavelength and/or intensity changes upon whatever functional process a protein performs. Although perceived to be enigmatic and not well understood, Trp is arguably now better understood than many of the extrinsic probes currently in use. Basic principles of intrinsic tryptophan fluorescence quenching and wavelength shifts in proteins are presented, with strong emphasis on the importance of electrostatics. The condensed description of findings from recent experiments and simulations of tryptophan fluorescence and intrinsic quenching in proteins is designed to help authors in planning and interpreting experimental results of ligand binding studies.

  15. Fluorescence quenching method for the determination of catechol with gold nanoparticles and tyrosinase hybrid system

    Institute of Scientific and Technical Information of China (English)

    Martin; M.F.Choi

    2010-01-01

    The determination method of catechol by fluorescence quenching was developed.The assay was based on the combination of the unique property of gold nanoparticles with tyrosinase enzymatic reaction.In the presence of tyrosinase,the fluorescence of gold nanoparticles was quenched by catechol which can be employed to detect catechol.Under the optimal conditions,a linear range 5.0×10~(-7)-1.0×10~(-3) mol L~(-1) and a detection limit 1.0×10~(-7) mol L~(-1) of catechol were obtained.o-Quinone intermediate produ...

  16. Fluorescence quenching of anthracene by N, N-diethylaniline in the O/W microemulsion

    Institute of Scientific and Technical Information of China (English)

    郭霞; 徐慧; 郭荣

    2000-01-01

    Photoinduced electron-transfer system of anthracene-N , N-di-ethylaniline (DEA) was studied in the oil in water (O/W) microemulsuins formed by SDS (sodium dodecyl sulfate), BA(benzyl alcohol) and H2O. The time-resolved fluorescence study showed that the fluorescence quenching of the excited anthracene by DEA occurs at the interface of the O/W micreomulsions Besides as the quencher of the excited anthrace ne, N, N-diethylaniine could act as a cosurfactant to change the structures of the microemulsions, just as BA did. The quenching rate constants for the different structures of the system were determined.

  17. Bioluminophore and Flavin Mononucleotide Fluorescence Quenching of Bacterial Bioluminescence-A Theoretical Study.

    Science.gov (United States)

    Luo, Yanling; Liu, Ya-Jun

    2016-11-02

    Bacterial bioluminescence with continuous glow has been applied to the fields of environmental toxin monitoring, drug screening, and in vivo imaging. Nonetheless, the chemical form of the bacterial bioluminophore is still a bone of contention. Flavin mononucleotide (FMN), one of the light-emitting products, and 4a-hydroxy-5-hydro flavin mononucleotide (HFOH), an intermediate of the chemical reactions, have both been assumed candidates for the light emitter because they have similar molecular structures and fluorescence wavelengths. The latter is preferred in experiments and was assigned in our previous density functional study. HFOH displays weak fluorescence in solutions, but exhibits strong bioluminescence in the bacterial luciferase. FMN shows the opposite behavior; its fluorescence is quenched when it is bound to the luciferase. This is the first example of flavin fluorescence quenching observed in bioluminescent systems and is merely an observation, both the quenching mechanism and quencher are still unclear. Based on theoretical analysis of high-level quantum mechanics (QM), combined QM and molecular mechanics (QM/MM), and molecular dynamics (MD), this paper confirms that HFOH in its first singlet excited state is the bioluminophore of bacterial bioluminescence. More importantly, the computational results indicate that Tyr110 in the luciferase quenches the FMN fluorescence via an electron-transfer mechanism.

  18. Fluorescence Quenching Investigation for Janus Green B and used as Probe in Determination of Nucleic Acids

    Institute of Scientific and Technical Information of China (English)

    陈莉华; 刘六战; 沈含熙

    2005-01-01

    Fluorescence quenching of janus green B (JGB) in sodium dodecyl sulfate (SDS) micelle by nucleic acids (DNA) was studied using UV-vis absorption, steady state fluorescence emission methods and lifetime measurements. In the SDS micelle, weak fluorescence of JGB was enhanced, and the maximum emission shifted from 425 to 410 nm. In the presence of DNA, the fluorescence of JGB was quenched. Linear relationships between the fluorescence quenching (F0/F) and concentrations of DNA were observed in the range of 2.4×10-8 to 1.08×10-7mol·L-1 for calf thymus nucleic acids (ct DNA) and 1.9×10-8 to 3.8×10-8 mol·L-1 for fish sperm nucleic acids (fs DNA) when 2.5×10-5 mol·L-1 JGB was employed. The limit detection were 1.3×10-8 mol·L-1 for ct DNA and 6.4×10-9 mol·L-1 for fs DNA. At high DNA concentration, there was a systematic deviation from the Stem-Volmer equation due to the static and dynamic quenching occurring simultaneously. The proposed method was applied to the determination of the nucleic acids in chicken blood extraction and the analytical results were in good agreement with the UV-method.

  19. Fluorescence Quenching and Binding Interaction of l0-Methylacridinium Iodide to Nucleic Acids

    Institute of Scientific and Technical Information of China (English)

    孙险峰; 江致勤; 丁兵林

    2003-01-01

    Interaction of 10-methylacridinium iodide (MAI) as fluorescence probe with nucleobases, nucleosides and nucleic acids has been studied by UV-visible absorption and fluorescence spectroscopy. It was found that fluorescence of MAI is strongly quenched by the nucleobases, nucleosides and nucleic acids, respectively. The quenching follows the Stern-Volmer linear equation. The fluorescence quenching rate constant (kq) was measured to be 109-1010 (L/mol)/s within the range of diffusion-controlled rate limit, indicating that the interaction between MAI and nucleic acid and their precursors is characteristic of electron transfer mechanism. In addition, the binding interaction model of MAI to calf thymus DNA (ct-DNA) was further investigated. Apparent hypochromism in the absorption spectra of MAI was observed when MAI binds to ct-DNA.Three spectroscopic methods, which include (1) UV spectroscopy, (2) fluorescence quenching of MAI, (3) competitive dual-probe method of MAI and ethidium bromide (EB), were utilized to determine the affinity binding constants (K)of MAI and ct-DNA. The binding constants K obtained from the above methods gave consistent data in the same range (1.0-5.5) ×104 L/mol, which lend credibility to these measurements. The binding site number was determined to be 1.9. The influence of thermal denaturation and phosphate concentration on the binding was examined. The binding model of MAI to ct-DNA including intercalation and outside binding was investigated.

  20. Quenching and enhancement of single-molecule fluorescence under metallic and dielectric tips

    Science.gov (United States)

    Azoulay, J.; Débarre, A.; Richard, A.; Tchénio, P.

    2000-08-01

    We report on fluorescence experiments by apertureless near-field optical microscopy. We develop a simple model that demonstrates the importance of non-radiative transfer and that takes into account the dependence of non-radiative transfer on tip geometry. This process is in competition with field enhancement and it is a key process to understand the observed fluorescence enhancement factors. The analysis of the different factors involved in the global fluorescence enhancement or quenching leads to new strategies to reach resolution down to a few nanometers by apertureless fluorescence microscopy.

  1. Investigation on the effect of fluorescence quenching of bovine serum albumin by cefoxitin sodium using fluorescence spectroscopy and synchronous fluorescence spectroscopy.

    Science.gov (United States)

    Li, Gaixia; Liu, Bao-Sheng; Zhang, Qiuju; Han, Rong

    2016-08-01

    The reaction mechanism of cefoxitin sodium with bovine serum albumin was investigated using fluorescence spectroscopy and synchronous fluorescence spectroscopy at different temperatures. The results showed that the change of binding constant of the synchronous fluorescence method with increasing temperature could be used to estimate the types of quenching mechanisms of drugs with protein and was consistent with one of fluorescence quenching method. In addition, the number of binding sites, type of interaction force, cooperativity between drug and protein and energy-transfer parameters of cefoxitin sodium and bovine serum albumin obtained from two methods using the same equation were consistent. Electrostatic force played a major role in the conjugation reaction between bovine serum albumin and cefoxitin sodium, and the type of quenching was static quenching. The primary binding site for cefoxitin sodium was sub-hydrophobic domain IIA, and the number of binding sites was 1. The value of Hill's coefficients (nH ) was approximately equal to 1, which suggested no cooperativity in the bovine serum albumin-cefoxitin sodium system. The donor-to-acceptor distance r fluorescence quenching of bovine serum albumin by cefoxitin sodium was also a non-radiation energy-transfer process. The results indicated that synchronous fluorescence spectrometry could be used to study the reaction mechanism between drug and protein, and was a useful supplement to the conventional method. Copyright © 2015 John Wiley & Sons, Ltd. Copyright © 2015 John Wiley & Sons, Ltd.

  2. Characterisation of dissolved organic matter fluorescence properties by PARAFAC analysis and thermal quenching.

    Science.gov (United States)

    Carstea, Elfrida M; Baker, Andy; Bieroza, Magdalena; Reynolds, Darren M; Bridgeman, John

    2014-09-15

    The fluorescence intensity of dissolved organic matter (DOM) in aqueous samples is known to be highly influenced by temperature. Although several studies have demonstrated the effect of thermal quenching on the fluorescence of DOM, no research has been undertaken to assess the effects of temperature by combining fluorescence excitation - emission matrices (EEM) and parallel factor analysis (PARAFAC) modelling. This study further extends previous research on thermal quenching by evaluating the impact of temperature on the fluorescence of DOM from a wide range of environmental samples, in the range 20 °C - 0 °C. Fluorescence intensity increased linearly with respect to temperature decrease at all temperatures down to 0 °C. Results showed that temperature affected the PARAFAC components associated with humic-like and tryptophan-like components of DOM differently, depending on the water type. The terrestrial humic-like components, C1 and C2 presented the highest thermal quenching in rural water samples and the lowest in urban water samples, while C3, the tryptophan-like component, and C4, a reprocessed humic-like component, showed opposite results. These results were attributed to the availability and abundance of the components or to the degree of exposure to the heat source. The variable thermal quenching of the humic-like components also indicated that although the PARAFAC model generated the same components across sites, the DOM composition of each component differed between them. This study has shown that thermal quenching can provide additional information on the characteristics and composition of DOM and highlighted the importance of correcting fluorescence data collected in situ.

  3. The amplified fluorescence quenching of heteroatomic conjugated polymers based on the "molecular wire" effects

    Institute of Scientific and Technical Information of China (English)

    HUANG Hongmei; WANG Kemin; XIAO Yi; ZHAI Qiuge; AN Delie; HUANG Shasheng; LI Du

    2003-01-01

    Tremendous interest has been evoked in the utility of the fluorescent conjugated polymers towards the creation of ultra-sensitive systems based on the molecular wire effects which can amplify the transduction events. Here, a series of new polymers —pyridine substitute poly (phen- ylene ethynylene)s are synthesized by Sonogashira-Hagihara coupling reaction. The impact of structure modification on the physical properties and spectral characteristics of polymers has been investigated. The quenching studies are carried out and exhibit that recognition site (pyridyle group) highly influences the quenching efficiency. The results show that polymer PI with pyridyl group entrapped in the conjugated backbone has the specific and sensitive response to Pd(Ⅱ). The fluorescence quenching of PⅠby Pd(Ⅱ) is about 65 times greater than that of model monomer.

  4. "Open-Box" Approach to Measuring Fluorescence Quenching Using an iPad Screen and Digital SLR Camera

    Science.gov (United States)

    Koenig, Michael H.; Yi, Eun P.; Sandridge, Matthew J.; Mathew, Alexander S.; Demas, James N.

    2015-01-01

    Fluorescence quenching is an analytical technique and a common undergraduate laboratory exercise. Unfortunately, a typical quenching experiment requires the use of an expensive fluorometer that measures the relative fluorescence intensity of a single sample in a closed compartment unseen by the experimenter. To overcome these shortcomings, we…

  5. A sensitive fluorescence quenching method for determination of bismuth with tiron

    Energy Technology Data Exchange (ETDEWEB)

    Taher, Mohammad Ali; Rahimi, Mina [Department of Chemistry, Shahid Bahonar University of Kerman, Kerman (Iran, Islamic Republic of); Fazelirad, Hamid, E-mail: hamidfazelirad@gmail.com [Department of Chemistry, Shahid Bahonar University of Kerman, Kerman (Iran, Islamic Republic of); Department of Chemistry, Science and Research Branch, Islamic Azad University, Yazd (Iran, Islamic Republic of); Young Researchers Society, Shahid Bahonar University of Kerman, P.O. Box 76175-133, Kerman (Iran, Islamic Republic of)

    2014-01-15

    We describe a fluorescence quenching method for determination of bismuth with tiron. The method is based on the reaction of tiron by bismuth(III) in acidic media. The influence of variables such as the pH, type of buffer, tiron concentration, reaction time and temperature were investigated. Under optimized conditions, the fluorescence quenching extent is proportional to the concentration of bismuth for Bi–tiron system at the range 0.13–2.09 μg mL{sup −1} and the detection limit is 0.05 μg mL{sup −1}. The proposed sensor presented good repeatability, evaluated in terms of relative standard deviation (R.S.D.=±0.498%) for 11 replicates. This sensitive, rapid and accurate method has been successfully applied to the determination of trace bismuth(III) in water and hair samples and certified reference materials. -- Highlights: • No previous paper report on use of fluorescence quenching for determination of Bi. • Fluorescence quenching of trion is a sensitive method for determination of Bi(III). • Under the optimum conditions the detection limit is very low (0.05 μg mL{sup −1}). • The procedure is simple and safe and has high tolerance limit to interferences.

  6. Studies on interactions between plant secondary metabolites and glutathione transferase using fluorescence quenching method.

    Science.gov (United States)

    Zhang, Xian; Cheng, Xinsheng; Wang, Chuanqin; Xue, Zechun; Yang, Liwen; Xi, Zheng

    2007-04-01

    The interactions between plant secondary metabolites (tannic acid, rutin, cinnamic acid and catechin) and glutathione transferase (GST) were investigated by fluorescence and UV-Vis absorption spectroscopy. Intrinsic fluorescence of GST was measured by selectively exciting their tryptophan (Trp) residues and quenching constants were determined using the Stern-Volmer equation. The binding affinity was found to be strongest for tannic acid and ranked in the order tannic acid>rutin>cinnamic acid>catechin. The pH values in the range of 6.7-7.9, except for tannic acid, did not affect significantly the affinity of rutin, cinnamic acid and catechin with GST. Results showed that the fluorescence quenching of GST was a static_quenching. Fluorescence quenching and UV-Vis absorption spectroscopy suggested that only the tannic acid changed the microenvironment of the Trp residues. Furthermore, the number of binding sites and binding constants at different pH values showed that tannic acid had strongest affinity towards GST and hydrogen bonding played an important role in the affinity between GST and the metabolites.

  7. Study on the Interaction between Cephalosporin Drugs and Papain by Spectroscopic Method: Equivalence of Fluorescence Quenching and Enhancement Equation%Study on the Interaction between Cephalosporin Drugs and Papain by Spectroscopic Method: Equivalence of Fluorescence Quenching and Enhancement Equation

    Institute of Scientific and Technical Information of China (English)

    杨曼曼; 席小莉; 杨频

    2011-01-01

    The interaction between two 4th generation of new cephalosporin drugs and papain was studied through spectroscopy method at different temperatures. Their dissociation constants were calculated by using theoretical formula of fluorescence quenching and fluorescence enhancement, respectively, and their corresponding thermodynamic functions, dipole-dipole non-radiative energy-transfer-efficiency and the action distances of acceptor-substrate etc. were calculated further. Analysis reveals that, the quenching on papain by cefpirome and cefepime is basically due to the dipole-dipole non-radiation energy-transfer and certain dynamic collision between donor and acceptor, the interaction between drug and papain is mainly hydrophobic which may provide useful information for pharmacological and metabolic study on papain. In this paper fluorescence quenching is regarded as negative fluorescence enhancement, and two kinds of theoretical formula of fluorescence quenching and fluorescence enhancement were used to calculate the experimental data of fluorescence quenching of a same batch, and very close results were obtained but with certain difference. The results not only display the equivalence of the two theoretical equations when treating acceptor-substrate action, but also show that the thermodynamic data based on the theoretical formula of fluorescence enhancement (4), which is deduced by us, are more reasonable. So we suggest that even in the process of studying the fluorescence quenching between receptor-substrate, using the theoretical formula of fluorescence enhancement (4) can get more reliable results.

  8. Low dose detection of γ radiation via solvent assisted fluorescence quenching.

    Science.gov (United States)

    Han, Ji-Min; Xu, Miao; Wang, Brian; Wu, Na; Yang, Xiaomei; Yang, Haori; Salter, Bill J; Zang, Ling

    2014-04-02

    Development of low cost, easy-to-use chemical sensor systems for low dose detection of γ radiation remains highly desired for medical radiation therapy and nuclear security monitoring. We report herein on a new fluorescence sensor molecule, 4,4'-di(1H-phenanthro[9,10-d]imidazol-2-yl)biphenyl (DPI-BP), which can be dissolved into halogenated solvents (e.g., CHCl3, CH2Cl2) to enable instant detection of γ radiation down to the 0.01 Gy level. The sensing mechanism is primarily based on radiation induced fluorescence quenching of DPI-BP. Pristine DPI-BP is strongly fluorescent in halogenated solvents. When exposed to γ radiation, the halogenated solvents decompose into various radicals, including hydrogen and chlorine, which then combine to produce hydrochloric acid (HCl). This strong acid interacts with the imidazole group of DPI-BP to convert it into a DPI-BP/HCl adduct. The DPI-BP/HCl adduct possesses a more planar configuration than DPI-BP, enhancing the π-π stacking and thus molecular aggregation. The strong molecular fluorescence of DPI-BP gets quenched upon aggregation, due to the π-π stacking interaction (forming forbidden low-energy excitonic transition). Interestingly the quenched fluorescence can be recovered simply by adding base (e.g., NaOH) into the solution to dissociate the DPI-BP/HCl adduct. Such sensing mechanism was supported by systematic investigations based on HCl titration and dynamic light scattering measurements. To further confirm that the aggregation caused fluorescence quenching, a half size analogue of DPI-BP, 2-phenyl-1H-phenanthro[9,10-d]imidazole (PI-Ph), was synthesized and investigated in comparison with the observations of DPI-BP. PI-Ph shares the same imidazole conjugation structure with DPI-BP and is expected to bind the same way with HCl. However, PI-Ph did not show fluorescence quenching upon binding with HCl likely due to the smaller π-conjugation structure, which can hardly enforce the π-π stacking assembly. Combining

  9. [Characterizing the interaction between roxarsone and humic acid by fluorescence quenching experiment].

    Science.gov (United States)

    Zhu, Jiang-Peng; Mei, Ting; Peng, Yun; Ge, Si-Yi; Li, Shi-Yin; Wang, Guo-Xiang

    2014-07-01

    In this study, the methods of fluorescence spectroscopy and fluorescence quenching titration technique were used to identify the interactions between humic acid (HA) and roxarsone (ROX). Effects of HA concentration, pH and temperature on the bonding strength between HA and ROX were investigated. The results showed that the four fluorescence peaks (E(x)/E(m) = 300 nm/480 nm, 370 nm/480 nm, 420 nm/500 nm, 460 nm/520 nm, marked as peak A, B, C, D respectively) of HA could be quenched by ROX. The extent of decreases in fluorescence intensities of different peaks was different and followed the order of C > B > A > D. The common logarithm of association constants (lg K) between peak A and ROX increased slightly with the increase of HA concentration and were much larger than the bimolecular quenching constant of O2. It was confirmed that the carboxyl groups and the carboxide groups of HA were quenched statically by ROX. The lg K values fluctuated between 3.55 L x mol(-1) and 3.98 L x mol(-1) when pH ranged from 5.00 to 9.00, and the maximum value occurred at pH 6.00. It might be resulted from the fact that pH could change the formation of ROX and conformation of phenolic hydroxyl groups and carboxyl groups in HA. The lg K values decreased and fluctuated between 2.65 L x mol(-1) and 3.89 L x mol(-1) with temperature ranging from 25.0 degrees C to 55.0 degrees C, which further confirmed the static quenching interaction between HA and ROX. Transient-fluorescence spectrum analyses and liner model simulations revealed that single static quenching was the main mechanism between ROX and the functional groups of fluorescence peak A, B, D in HA, and combined dynamic and static quenching was the main mechanism between ROX and the functional groups of peak C in HA.

  10. Green tea catechins quench the fluorescence of bacteria-conjugated Alexa fluor dyes.

    Science.gov (United States)

    Zhao, Lin; Li, Wei; Zhu, Shu; Tsai, Sheena; Li, Jianhua; Tracey, Kevin J; Wang, Ping; Fan, Saijun; Sama, Andrew E; Wang, Haichao

    2013-10-01

    Accumulating evidence suggests that Green tea polyphenolic catechins, especially the (-)-epigallocatechin gallate (EGCG), can be cross-linked to many proteins, and confer a wide range of anti-bacterial activities possibly by damaging microbial cytoplasmic lipids and proteins. At the doses that conferred protection against lethal polymicrobial infection (induced by cecal ligation and puncture), EGCG significantly reduced bacterial loads particularly in the liver and lung. To elucidate its bactericidal mechanisms, we determined whether EGCG affected the fluorescence intensities of bacteria-conjugated Alexa Fluor 488 or 594 dyes. When mixed with unconjugated Alexa Fluor 488 or 594 dyes, EGCG or analogs did not affect the fluorescence intensity of these dyes. In a sharp contrast, EGCG and some analogs (e.g., Catechin Gallate, CG), markedly reduced the fluorescence intensity of Gram-positive Staphylococcus aureus-conjugated Alexa 594 and Gram-negative Escherichia coli-conjugated Alexa 488. Interestingly, co-treatment with ethanol impaired the EGCG-mediated fluorescence quenching of the G(+) S. aureus, but not of the G(-) E. coli-conjugated Alexa Flour dyes. In light of the notion that Alexa Fluor dyes can be quenched by aromatic amino acids, it is plausible that EGCG exerts antimicrobial activities possibly by altering microbial protein conformations and functions. This possibility can now be explored by screening other fluorescence-quenching agents for possible antimicrobial activities.

  11. Ensemble and single-molecule studies on fluorescence quenching in transition metal bipyridine-complexes.

    Directory of Open Access Journals (Sweden)

    Dominik Brox

    Full Text Available Beyond their use in analytical chemistry fluorescent probes continuously gain importance because of recent applications of single-molecule fluorescence spectroscopy to monitor elementary reaction steps. In this context, we characterized quenching of a fluorescent probe by different metal ions with fluorescence spectroscopy in the bulk and at the single-molecule level. We apply a quantitative model to explain deviations from existing standard models for fluorescence quenching. The model is based on a reversible transition from a bright to a dim state upon binding of the metal ion. We use the model to estimate the stability constants of complexes with different metal ions and the change of the relative quantum yield of different reporter dye labels. We found ensemble data to agree widely with results from single-molecule experiments. Our data indicates a mechanism involving close molecular contact of dye and quenching moiety which we also found in molecular dynamics simulations. We close the manuscript with a discussion of possible mechanisms based on Förster distances and electrochemical potentials which renders photo-induced electron transfer to be more likely than Förster resonance energy transfer.

  12. Exciton-polaron quenching in organic thin-film transistors studied by fluorescence lifetime imaging microscopy

    DEFF Research Database (Denmark)

    Jensen, Per Baunegaard With; Leißner, Till; Osadnik, Andreas

    Organic semiconductors show great potential in electronic and optical applications. However, a major challenge is the degradation of the semiconductor materials that cause a reduction in device performance. Here, we present our investigations of Organic Thin Film Transistors (OTFT) based...... that correlates with the local charge density indicates a pronounced exciton quenching by the injected charges. Subsequent FLIM measurements on previously biased OTFT devices show a general decrease in fluorescence lifetime suggesting degradation of the organic semiconductor. This is correlated with the results...... on the material 5,5-bis(naphthyl)-2,20-bithiophene (NaT2). These types of OTFT have previously been shown to have light emitting properties. Fluorescence Lifetime Imaging Microscopy (FLIM) has been used to investigate the exciton-polaron quenching in biased OTFTs. A clear reduction in fluorescence lifetime...

  13. Determination of L-phenylalanine by cucurbit[7]uril sensitized fluorescence quenching method

    Institute of Scientific and Technical Information of China (English)

    Chang Feng Li; Li Ming Du; Hao Wu; Ying Xia Chang

    2011-01-01

    The determination method of L-phenylalanine (LPA) by fluorescence quenching was developed. The assay was based on the combination of the cucurbit[7]uril (CB[7]) with palmatine hydrochloride (PAL) reaction. In the presence of CB[7], the fluorescence of PAL was quenched by LPA which can be employed to detect LPA. Under the optimal conditions, a linear range 3.63 × 10-8-9.68 × 10-6 mol/L and a detection limit 1.27 × 10-8 mol/L of LPA were obtained. The relative standard deviation (R.S.D) was 1.8% obtained from a series of11 standards each containing 6.05 × 10-6 mol/L oLPA. This paper also discusses the mechanism of fluorescence indicator probe.

  14. Ultrasensitive fluorescence immunoassay for detection of ochratoxin A using catalase-mediated fluorescence quenching of CdTe QDs

    Science.gov (United States)

    Huang, Xiaolin; Zhan, Shengnan; Xu, Hengyi; Meng, Xianwei; Xiong, Yonghua; Chen, Xiaoyuan

    2016-04-01

    Herein, for the first time we report an improved competitive fluorescent enzyme linked immunosorbent assay (ELISA) for the ultrasensitive detection of ochratoxin A (OTA) by using hydrogen peroxide (H2O2)-induced fluorescence quenching of mercaptopropionic acid-modified CdTe quantum dots (QDs). In this immunoassay, catalase (CAT) was labeled with OTA as a competitive antigen to connect the fluorescence signals of the QDs with the concentration of the target. Through the combinatorial use of H2O2-induced fluorescence quenching of CdTe QDs as a fluorescence signal output and the ultrahigh catalytic activity of CAT to H2O2, our proposed method could be used to perform a dynamic linear detection of OTA ranging from 0.05 pg mL-1 to 10 pg mL-1. The half maximal inhibitory concentration was 0.53 pg mL-1 and the limit of detection was 0.05 pg mL-1. These values were approximately 283- and 300-folds lower than those of horseradish peroxidase (HRP)-based conventional ELISA, respectively. The reported method is accurate, highly reproducible, and specific against other mycotoxins in agricultural products as well. In summary, the developed fluorescence immunoassay based on H2O2-induced fluorescence quenching of CdTe QDs can be used for the rapid and highly sensitive detection of mycotoxins or haptens in food safety monitoring.Herein, for the first time we report an improved competitive fluorescent enzyme linked immunosorbent assay (ELISA) for the ultrasensitive detection of ochratoxin A (OTA) by using hydrogen peroxide (H2O2)-induced fluorescence quenching of mercaptopropionic acid-modified CdTe quantum dots (QDs). In this immunoassay, catalase (CAT) was labeled with OTA as a competitive antigen to connect the fluorescence signals of the QDs with the concentration of the target. Through the combinatorial use of H2O2-induced fluorescence quenching of CdTe QDs as a fluorescence signal output and the ultrahigh catalytic activity of CAT to H2O2, our proposed method could be used to

  15. High-contrast visualization of graphene oxide on dye-sensitized glass, quartz, and silicon by fluorescence quenching.

    Science.gov (United States)

    Treossi, Emanuele; Melucci, Manuela; Liscio, Andrea; Gazzano, Massimo; Samorì, Paolo; Palermo, Vincenzo

    2009-11-04

    We present a novel approach for detecting and visualizing graphene oxide (GO) with high contrast on different substrates, including glass, quartz, and silicon. Visualization of GO sheets is accomplished through quenching the fluorescence of a thiophene dye, giving high optical contrast without the need to use interference methods. A comparison of fluorescence, AFM, and XRD measurements confirmed that even a single GO sheet can completely quench the fluorescence and thus be quickly visualized.

  16. Potassium Iodide and Acrylamide Fluorescence Quenching Studies on Gamma-Crystallins of Human Lenses in Development and Aging

    Institute of Scientific and Technical Information of China (English)

    1992-01-01

    γ_1-γ_2-and γ_3-crystallin(corresponding to γs-,γC-and γD- crys-tallin respectively)of human fetal,2 year and 20~+ year old lenses areseparated by Sephadex gel chromatography.lodide and acrylamide are usedto quench the tryptophane fluorescence of sub-γ-crystalline fractions and Ksvand fa values are calculated.The results show that iodide has no clear quench-ing effects on all γ-crystallins,the quenching effects of acrylamide on the tryp-tophan fluorescences of γ1-γ2-and γ3-crystallin from lenses of the ...

  17. Hydrophobic Acceleration of Electron-Transfer Fluorescence Quenching Processes between Excited 1-Alkanoylperylenes and Ferrocene Derivatives

    Institute of Scientific and Technical Information of China (English)

    SHI, Ji-Liang

    2001-01-01

    Coaggregation-facilitated Electron-transfer (ET) fluorescence quenching processes between an excited 1-alkanoylperylene (Pe-n, n=4, 8, 12) as an acceptor and an 1-alkanoylferrocene (Fc-m, m=4, 8, 12, 16 ) or a 1,1-dialkanoyiferrocene (Fc-m-2, m=4, 8, 12, 16) as a donor have been investigated by means of fluorescence spectroscopy in dioxane (DX)H2O binary solvents of different φ values, where φ is the volume fraction of the organic component of an aquiorgano mixture. This is a first observation of an ET processes facilitated by hydrophobic-lipophilic interaction (HLI) with organometallic compounds as donors. Tne extent of HLI-driven coaggregation between the acceptor and the donor may be assessed from the efficiency of fluorescence quenching, i.e.,the slope B of Eq. ( 2 ). The chain-foldability effect and the intramolecular “self-satisfation” of HLI for Fc-m-2 have been observed. The experimental results show that the behavior of Fc-m as a quencher for fluorescence quenching of Pen* is rather similar to that of N-alkylsubstituend phenothiazine.

  18. Fluorescence Quenching of Pheo-phytin-a by Copper(Ⅱ)Ions

    Institute of Scientific and Technical Information of China (English)

    HU,Mingbo; LI,Huaixiang; CHEN,Lusheng; ZHANG,Huaibin; DONG,Chuan

    2009-01-01

    A method was developed for determination of Cu(Ⅱ)ions quantitatively by measuring fluorescent intensity of pheophytin-a(Pheoa)solution.The Pheoa was obtained by de-intercalation of magnesium from the porphyrin ring of chlorophyll-a(Chla)extracted from fresh spinach leaves.Its two UV-Vis absorption peaks at 505 and 535 am in acetone solution have been observed but disappeared When the acetone solution of Pheoa was mixed with a Cu(Ⅱ)ion aqueous solution.A fluorescence quenching phenomenon was thus observed when the acetone solution of Pheoa was mixed with an aqueous solution of Cu(Ⅱ)ions.However,other physiologically relevant cations rarely caused any quenching fluorescence of Pheoa under the same experimental conditions.Kinetics of the fluorescence fading process Was investigated by measuring the effects of Cu(Ⅱ)ion concentration,reaction time and reaction temperature on the fluorescence intensity of the Pheoa acetone solution.An activation energy of(10±1)kJ·mol-1 was estimated from Arrhenius empirical relation assuming that the interaction between the Pheoa and the Cu(Ⅱ)ions was the first order reaction.The calibration graph obtained with the fluorescence Was linear over the Cu(Ⅱ)concentration range of 8.0×10-5-8.0×10-7 mol·dm-3 with a detection limit of 8.0×10-7 mool·dm-3 for Cu(Ⅱ)ion.

  19. Carotenoid-chlorophyll coupling and fluorescence quenching correlate with protein packing density in grana-thylakoids.

    Science.gov (United States)

    Holleboom, Christoph-Peter; Yoo, Sunny; Liao, Pen-Nan; Compton, Ian; Haase, Winfried; Kirchhoff, Helmut; Walla, Peter Jomo

    2013-09-26

    The regulation of light-harvesting in photosynthesis under conditions of varying solar light irradiation is essential for the survival and fitness of plants and algae. It has been proposed that rearrangements of protein distribution in the stacked grana region of thylakoid membranes connected to changes in the electronic pigment-interaction play a key role for this regulation. In particular, carotenoid-chlorophyll interactions seem to be crucial for the down-regulation of photosynthetic light-harvesting. So far, it has been difficult to determine the influence of the dense protein packing found in native photosynthetic membrane on these interactions. We investigated the changes of the electronic couplings between carotenoids and chlorophylls and the quenching in grana thylakoids of varying protein packing density by two-photon spectroscopy, conventional chlorophyll fluorometry, low-temperature fluorescence spectroscopy, and electron micrographs of freeze-fracture membranes. We observed an increasing carotenoid-chlorophyll coupling and fluorescence quenching with increasing packing density. Simultaneously, the antennas size and excitonic connectivity of Photosystem II increased with increasing quenching and carotenoid-chlorophyll coupling whereas isolated, decoupled LHCII trimers decreased. Two distinct quenching data regimes could be identified that show up at different protein packing densities. In the regime corresponding to higher protein packing densities, quenching is strongly correlated to carotenoid-chlorophyll interactions whereas in the second regime, a weak correlation is apparent with low protein packing densities. Native membranes are in the strong-coupling data regime. Consequently, PSII and LHCII in grana membranes of plants are already quenched by protein crowding. We concluded that this ensures efficient electronic connection of all pigment-protein complexes for intermolecular energy transfer to the reaction centers and allows simultaneously

  20. Quenching of the intrinsic fluorescence of bovine serum albumin by chlorpromazine and hemin

    Directory of Open Access Journals (Sweden)

    Silva D.

    2004-01-01

    Full Text Available The binding of chlorpromazine (CPZ and hemin to bovine serum albumin was studied by the fluorescence quenching technique. CPZ is a widely used anti-psychotic drug that interacts with blood components, influences bioavailability, and affects function of several biomolecules. Hemin is an important ferric residue of hemoglobin that binds within the hydrophobic region of albumin with high specificity. Quenching of the intrinsic fluorescence of bovine serum albumin (BSA was observed by selectively exciting tryptophan residues at 290 nm. Emission spectra were recorded in the range from 300 to 450 nm for each quencher addition. Stern-Volmer graphs were plotted, and the quenching constant estimated for BSA solution titrated with hemin at 25ºC was 1.44 (± 0.05 x 10(5 M-1. Results showed that bovine albumin tryptophans are not equally accessible to CPZ, in agreement with the idea that polar or charged quenchers have more affinity for amino acid residues on the outer wall of the protein. Hemin added to albumin solution at a molar ratio of 1:1 quenched about 25% of their fluorescence. The quenching effect of CPZ on albumin-hemin solution was stronger than on pure BSA. This increase can be the result of combined conformational changes in the structure of albumin caused firstly by hemin and then by CPZ. Our results suggest that the primary binding site for hemin on bovine albumin may be located asymmetrically between the two tryptophans along the sequence formed by subdomains IB and IIA, closer to tryptophan residue 212.

  1. Femtosecond fluorescence spectra of tryptophan in human gamma-crystallin mutants: site-dependent ultrafast quenching.

    Science.gov (United States)

    Xu, Jianhua; Chen, Jiejin; Toptygin, Dmitri; Tcherkasskaya, Olga; Callis, Patrik; King, Jonathan; Brand, Ludwig; Knutson, Jay R

    2009-11-25

    The eye lens Crystallin proteins are subject to UV irradiation throughout life, and the photochemistry of damage proceeds through the excited state; thus, their tryptophan (Trp) fluorescence lifetimes are physiologically important properties. The time-resolved fluorescence spectra of single Trps in human gammaD- and gammaS-Crystallins have been measured with both an upconversion spectrophotofluorometer on the 300 fs to 100 ps time scale, and a time correlated single photon counting apparatus on the 100 ps to 10 ns time scale, respectively. Three Trps in each wild type protein were replaced by phenylalanine, leading to single-Trp mutants: W68-only and W156-only of HgammaD- and W72-only and W162-only of HgammaS-Crystallin. These proteins exhibit similar ultrafast signatures: positive definite decay associated spectra (DAS) for 50-65 ps decay constants that indicate dominance of fast, heterogeneous quenching. The quenched population (judged by amplitude) of this DAS differs among mutants. Trps 68, 156 in human gammaD- and Trp72 in human gammaS-Crystallin are buried, but water can reach amide oxygen and ring HE1 atoms through narrow channels. QM-MM simulations of quenching by electron transfer predict heterogeneous decay times from 50-500 ps that agree with our experimental results. Further analysis of apparent radiative lifetimes allow us to deduce that substantial subpopulations of Trp are fully quenched in even faster (sub-300 fs) processes for several of the mutants. The quenching of Trp fluorescence of human gammaD- and gammaS-Crystallin may protect them from ambient light induced photo damage.

  2. Fluorescence quenching of uric acid solubilized in bicontinuous microemulsion by nitrobenzene

    Directory of Open Access Journals (Sweden)

    Maurice O. Iwunze

    2013-02-01

    Full Text Available Abstract: Uric Acid is known to be practically insoluble in aqueous and alcoholic media. However, it exhibits a reasonable solubility in a Bicontinuous Microemulsion system – a 15-fold or more increase in solubility in this system compared to its solubility in water. The bicontinuous microemulsion is made up of three components –Dodecane-Surfactant-water. Uric acid solubilized in this system is quenched by nitrobenzene. The obtained fluorescence data do not obey the Stern-Volmer equation when plotted accordingly. Therefore, the modified Stern-Volmer equation was used to analyze the data. It was observed that only one third (1/3 of uric acid is accessible to quenching in this medium and the reaction is diffusion-limited. The Stern-Volmer quenching constant, KSV, was calculated to be 130 M-1 and the fluorescence lifetime, 0, the quantum yield,, and the bimolecular quenching rate constant, kq, were calculated as 10.6 nanoseconds, 0.06 and 1.231010 M-1s-1, respectively.

  3. Spectrofluorimetric determination of 5-fluorouracil by fluorescence quenching of 9-anthracenecarboxylic acid

    Science.gov (United States)

    Khot, M. S.; Bhattar, S. L.; Kolekar, G. B.; Patil, S. R.

    2010-09-01

    Photo-induced intermolecular electron transfer (PET) interaction between excited singlet (S 1) state of 9-anthracene carboxylic acid (9-ANCA) and DNA bases of pyrimidines as uracil and 5-fluorouracil (5-FU) has been studied in water and ethanol solutions using steady-state fluorescence spectroscopy. The intensity of all emission bands of 9-ANCA was quenched in presence of uracil and 5-FU by electron transfer reaction without formation of an exciplex. It was found that uracil and 5-fluorouracil acts as effective electron donors and simultaneously quench the fluorescence of electron-accepting sensitizer 9-ANCA. The quenching by diffusion-controlled rate coincides well with the dynamic Stern-Volmer correlation. The bimolecular quenching rate constant (kqss) and electron transfer rate constant ( ket) observed are seen to be much higher for 5-fluorouracil than those for uracil. The thermodynamic parameters estimated by using the Rehm-Weller equation were used to propose a suitable mechanism for PET occurring between uracils and 9-ANCA. The proposed method was used to determine 5-fluorouracil from pharmaceutical samples with satisfactory results. The technique is more selective, sensitive and relatively free from coexisting substances.

  4. Fluorescence quenching as a tool to investigate quinolone antibiotic interactions with bacterial protein OmpF.

    Science.gov (United States)

    Neves, Patrícia; Sousa, Isabel; Winterhalter, Mathias; Gameiro, Paula

    2009-02-01

    The outer membrane porin OmpF is an important protein for the uptake of antibiotics through the outer membrane of gram-negative bacteria; however, the possible binding sites involved in this uptake are still not recognized. Determination, at the molecular level, of the possible sites of antibiotic interaction is very important, not only to understand their mechanism of action but also to unravel bacterial resistance. Due to the intrinsic OmpF fluorescence, attributed mainly to its tryptophans (Trp(214), Trp(61)), quenching experiments were used to assess the site(s) of interaction of some quinolone antibiotics. OmpF was reconstituted in different organized structures, and the fluorescence quenching results, in the presence of two quenching agents, acrylamide and iodide, certified that acrylamide quenches Trp(61) and iodide Trp(214). Similar data, obtained in presence of the quinolones, revealed distinct behaviors for these antibiotics, with nalidixic acid interacting near Trp(214) and moxifloxacin near Trp(61). These studies, based on straightforward and quick procedures, show the existence of conformational changes in the protein in order to adapt to the different organized structures and to interact with the quinolones. The extent of reorganization of the protein in the presence of the different quinolones allowed an estimate on the sites of protein/quinolone interaction.

  5. Electronic interactions of i, i + 1 dithioamides: increased fluorescence quenching and evidence for n-to-π* interactions.

    Science.gov (United States)

    Huang, Yun; Ferrie, John J; Chen, Xing; Zhang, Yitao; Szantai-Kis, D Miklos; Chenoweth, David M; Petersson, E James

    2016-06-14

    Thioamide residues can be effective, minimally-perturbing fluorescence quenching probes for studying protein folding and proteolysis. In order to increase the level of quenching, we have here explored the use of adjacent dithioamides. We have found that they are more effective fluorescence quenchers, as expected, but we have also observed unexpected changes in the thioamide absorption spectra that may arise from n-to-π* interactions of the thiocarbonyls. We have made use of the increased quenching to improve the fluorescence turn-on of thioamide protease sensors.

  6. Quenching of tryptophan fluorescence of bovine serum albumin under the effect of ions of heavy metals

    Science.gov (United States)

    Plotnikova, O. A.; Mel'nikov, A. G.; Mel'nikov, G. V.; Gubina, T. I.

    2016-01-01

    The interaction of heavy metals with bovine serum albumin (BSA) has been studied using data of quenching of intrinsic fluorescence of the protein by the ions of the heavy metals. Under the assumption of static quenching with formation of nonfluorescent complexes of fluorophores of BSA with heavy metals, conclusions have been drawn on the peculiarities of binding of the heavy metals to the protein. The values of the Stern-Volmer constants of association and those of the constants of BSA binding to the heavy metals decrease in the order Cu(II) > Pb(II) > Cd(II). It has been experimentally found that the copper ions have greater capacity to bind to the protein with the formation of the nonfluorescent complexes, which results in a significant decrease in the fluorescence intensity of the protein.

  7. Spectroscopic evidence of xanthine compounds fluorescence quenching effect on water-soluble porphyrins

    Science.gov (United States)

    Makarska-Bialokoz, Magdalena

    2015-02-01

    The formation of π-stacked complexes between water-soluble porphyrins: 4,4‧,4″,4″‧-(21H,23H-porphine-5,10,15,20-tetrayl)tetrakis-(benzoic acid) (H2TCPP), 5,10,15,20-tetrakis(4-sulfonatophenyl)-21H,23H-porphine (H2TPPS4), 5,10,15,20-tetrakis[4-(trimethylammonio)phenyl]-21H,23H-porphine tetra-p-tosylate (H2TTMePP), 5,10,15,20-tetrakis(1-methyl-4-pyridyl)-21H,23H-porphine tetra-p-tosylate (H2TMePyP), the Cu(II) complexes of H2TTMePP and H2TMePyP, as well as chlorophyll a with xanthine, theophylline (1,3-dimethylxanthine) and theobromine (3,7-dimethylxanthine) has been studied analysing their absorption and steady-state fluorescence spectra in aqueous (or acetone in case of chlorophyll a) solution. During titration by the compounds from xanthine group the bathochromic effect in the porphyrin absorption spectra as well as the hypochromicity of the porphyrin Soret maximum can be noticed. The fluorescence quenching effect observed during interactions in the systems examined suggests the process of static quenching. The association and fluorescence quenching constants are of the order of magnitude of 103 - 102 mol-1. The results obtained show that xanthine and its derivatives can quench the fluorescence of the porphyrins according to the number of methyl groups in the molecule of quencher.

  8. An Intelligent Optical Dissolved Oxygen Measurement Method Based on a Fluorescent Quenching Mechanism

    Directory of Open Access Journals (Sweden)

    Fengmei Li

    2015-12-01

    Full Text Available Dissolved oxygen (DO is a key factor that influences the healthy growth of fishes in aquaculture. The DO content changes with the aquatic environment and should therefore be monitored online. However, traditional measurement methods, such as iodometry and other chemical analysis methods, are not suitable for online monitoring. The Clark method is not stable enough for extended periods of monitoring. To solve these problems, this paper proposes an intelligent DO measurement method based on the fluorescence quenching mechanism. The measurement system is composed of fluorescent quenching detection, signal conditioning, intelligent processing, and power supply modules. The optical probe adopts the fluorescent quenching mechanism to detect the DO content and solves the problem, whereas traditional chemical methods are easily influenced by the environment. The optical probe contains a thermistor and dual excitation sources to isolate visible parasitic light and execute a compensation strategy. The intelligent processing module adopts the IEEE 1451.2 standard and realizes intelligent compensation. Experimental results show that the optical measurement method is stable, accurate, and suitable for online DO monitoring in aquaculture applications.

  9. Synthesis, characterization and fluorescence quenching of conjugated polymer containing triphenylamine group

    Institute of Scientific and Technical Information of China (English)

    Feng LIU; Jianhua XIAO; Weihua REN; Jun HU; Honglai LIU

    2008-01-01

    Poly(triphenylamine-p-phenylenevinylene)s with two different end-groups were obtained through a Wittig polycondensation. The structures of two copoly-mers were characterized. Ultraviolet and visible spectro-scopy (UV-Vis) and photoluminescence (PL) spectra show the end-capped polymer emits intensive green light in both solution and film state. Their applications in the detection of nitro compounds were investigated, and the results show high fluorescence quenching sensitivity of the end-capped polymer towards o-nitrotoluene (o-NT). When the concentration of o-NT was 21.5×10-3 mol/L, the fluorescence quenching reached 96%. Additionally, after the exposure of polymer film in three different quenchers such as dinitrotoluene (DNT), p-nitrobenzo-quinone (p-BQ) and p-nitrotoluene (p-NT) for 600 s, its fluorescence quenching reached 93.6%, 11.5% and 77.9%, respectively. This kind of polymer has great advantages in preparation and may find applications in the detection of nitro explosives.

  10. The fluorescence quenching mechanism of coumarin 120 with CdS nanoparticles in aqueous suspension

    Energy Technology Data Exchange (ETDEWEB)

    Acar, Murat; Bozkurt, Ebru; Meral, Kadem; Arık, Mustafa; Onganer, Yavuz, E-mail: yonganer@atauni.edu.tr

    2015-01-15

    The interaction of coumarin 120 (C120) with CdS nanoparticles (CdS NPs) in aqueous suspension was examined by using UV–vis absorption, steady-state, time-resolved fluorescence, and electron paramagnetic resonance (EPR) spectroscopy techniques. The fluorescence intensity of C120 was quenched with increasing the amount of CdS NPs in the aqueous suspension. The spectroscopic data revealed that the C120 molecules adsorbed on CdS NPs via electrostatic interactions. The apparent association constant (K{sub app}) and the degree of association (α) for C120/CdS NPs were determined as 130.3 M{sup −1} and 0.51 for 4 nm CdS NPs and 624.3 M{sup −1} and 0.71 for 8 nm CdS NPs, respectively. The photoinduced EPR studies exhibited that no electron transfers between CdS and C120 taking place. The results revealed that the fluorescence quenching of C120 with different CdS NPs is due to the formation of a non-fluorescent complex. - Highlights: • Interaction of C120 with CdS NPs in aqueous solution was spectroscopically examined. • Nonfluorescent C120–CdS NPs complexes in aqueous solution were formed. • In the system, CdS NPs in aqueous solution acted as a fluorescence quencher.

  11. Determination of sunset yellow in soft drinks based on fluorescence quenching of carbon dots

    Science.gov (United States)

    Yuan, Yusheng; Zhao, Xin; Qiao, Man; Zhu, Jinghui; Liu, Shaopu; Yang, Jidong; Hu, Xiaoli

    2016-10-01

    Fluorescent carbon dots was prepared by heating N-(2-hydroxyethyl)ethylene diaminetriacetic acid in air. The carbon dots were not only highly soluble in water but also uniform in size, and possessed strong blue fluorescence and excitation wavelength-dependent emission properties with the maximum excitation and emission wavelength at 366 nm and 423 nm, respectively. Food colorant sunset yellow whose excitation and emission wavelength at 303 nm and 430 nm could selectively quench the fluorescence of carbon dots, efficient fluorescent resonance energy transfer between the carbon dots and sunset yellow is achieved. This was exploited to design a method for the determination of sunset yellow in the concentration range from 0.3 to 8.0 μmol L- 1, with a limit of detection (3 σ/k) of 79.6 nmol L- 1. Furthermore the fluorimetric detection method was established and validated for sunset yellow in soft drinks samples with satisfactory results.

  12. Fluorescence Quenching Nanoprobes Dedicated to In Vivo Photoacoustic Imaging and High-Efficient Tumor Therapy in Deep-Seated Tissue.

    Science.gov (United States)

    Qin, Huan; Zhou, Ting; Yang, Sihua; Xing, Da

    2015-06-10

    Photoacoustic imaging (PAI) and photoacoustic (PA) therapy have promising applications for treating tumors. It is known that the utilization of high-absorption-coefficient probes can selectively enhance the PAI target contrast and PA tumor therapy efficiency in deep-seated tissue. Here, the design of a probe with the highest availability of optical-thermo conversion by using graphene oxide (GO) and dyes via π-π stacking interactions is reported. The GO serves as a base material for loading dyes and quenching dye fluorescence via fluorescence resonance energy transfer (FRET), with the one purpose of maximum of PA efficiency. Experiments verify that the designed fluorescence quenching nanoprobes can produce stronger PA signals than the sum of the separate signals generated in the dye and the GO. Potential applications of the fluorescence quenching nanoprobes are demonstrated, dedicating to enhance PA contrast of targets in deep-seated tissues and tumors in living mice. PA therapy efficiency both in vitro and in vivo by using the fluorescence quenching nanoprobes is found to be higher than with the commonly used PA therapy agents. Taken together, quenching dye fluorescence via FRET will provide a valid means for developing high-efficiency PA probes. Fluorescence quenching nanoprobes are likely to become a promising candidate for deep-seated tumor imaging and therapy.

  13. Fluorescence Quenching Study on the Interaction of Some Schiff Base Complexes with Bovine Serum Albumin

    Institute of Scientific and Technical Information of China (English)

    MEI,Ping; ZHANG,Li-Xia; LIU,Yi; CAI,Li-Hua; HU,Pei-Zhi

    2008-01-01

    The interaction of Schiff base ligand A and its three metal complexes[A-Fe(Ⅱ), A-Cu(Ⅱ), and A-Zn(Ⅱ)] with bovine serum albumin (BSA) was investigated using a tryptophan fluorescence quenching method. The Schiff base ligand A and its three metal complexes all showed quenching of BSA fluorescence in a Tris-HCl buffer. Quenching constants were determined for quenching BSA by the Schiff base ligand A and its metal complexes in a Tris-HCl buffer (pH=7.4) at different temperatures. The experimental results show that the dynamic quenching constant (KSV) was increased with increasing temperature, whereas the association constant (K) was decreased with the in crease of temperature. The thermodynamic parameters ΔH, ΔG and ΔS at different temperatures were calculated.The ionic strength of the Tris-HCl buffer had a great influence on the wavelength of maximum emission of BSA.Under low ionic strength, the emission spectra of BSA influenced by A-Zn(Ⅱ) had a small blue shift. Compared to A-Zn(Ⅱ), the emission spectra of BSA in the presence of the Schiff base ligand A and A-Cu(Ⅱ) had no significant λem shift. At high ionic strength, the emission spectra of BSA upon addition of the Schiff base A, A-Fe(Ⅱ), and A-Zn(Ⅱ) all had a red shift, but the emission spectra of BSA had λem shift neither at low ionic strength, nor at high ionic strength in the presence of A-Cu(Ⅱ). Furthermore, the temperature did not affect the λem shift of BSA emission spectra.

  14. Binding of caffeine with caffeic acid and chlorogenic acid using fluorescence quenching, UV/vis and FTIR spectroscopic techniques.

    Science.gov (United States)

    Belay, Abebe; Kim, Hyung Kook; Hwang, Yoon-Hwae

    2016-03-01

    The interactions of caffeine (CF) with chlorogenic acid (CGA) and caffeic acid (CFA) were investigated by fluorescence quenching, UV/vis and Fourier transform infrared (FTIR) spectroscopic techniques. The results of the study indicated that the fluorescence quenching between caffeine and hydroxycinnamic acids could be rationalized in terms of static quenching or the formation of non-fluorescent CF-CFA and CF-CGA complexes. From fluorescence quenching spectral analysis, the quenching constant (KSV), quenching rate constant (kq), number of binding sites (n), thermodynamic properties and conformational changes of the interaction were determined. The quenching constants (KSV) between CF and CGA, CFA are 1.84 × 10(4) and 1.04 × 10(4) L/mol at 298 K and their binding site n is ~ 1. Thermodynamic parameters determined using the Van't Hoff equation indicated that hydrogen bonds and van der Waal's forces have a major role in the reaction of caffeine with caffeic acid and chlorogenic acid. The 3D fluorescence, UV/vis and FTIR spectra also showed that the binding of CF with CFA and CGA induces conformational changes in CFA and CGA.

  15. Choline-induced selective fluorescence quenching of acetylcholinesterase conjugated Au@BSA clusters.

    Science.gov (United States)

    Mathew, Meegle S; Baksi, Ananya; Pradeep, T; Joseph, Kuruvilla

    2016-07-15

    We have developed a highly selective sensitive fluorescent detection of acetylcholine (ACh) using bovine serum albumin (BSA) protected atomically precise clusters of gold. The gold quantum clusters (AuQC@BSA) synthesized using bovine serum albumin and conjugated with acetylcholinesterase (AChE), an enzyme specific for acetylcholine, resulting in AuQC@BSA-AChE. The enzyme, AChE hydrolyzes acetylcholine (ACh) to choline (Ch) which in turn interacts with AuQC@BSA-AChE and quenches its fluorescence, enabling sensing. We have carried out the real time monitoring of the hydrolysis of ACh using electrospray ionization mass spectrometry (ESI MS) to find out the mechanism of fluorescent quenching. The validity of present method for determination of concentration of acetylcholine in real system such as blood was demonstrated. Further, the sensor, AuQC@BSA-AChE can be easily coated on paper and an efficient and cheap sensor can be developed and detection limit for ACh is found to be 10nM. The fluorescent intensity of AuQC@BSA-AChE is sensitive towards acetylcholine in range of 10nM to 6.4µM. This suggests that AuQC@BSA-AChE has an excellent potential to be used for diagnosis of various neuropsychological and neuropsychiatric disorders.

  16. Characterization and application of PBA fiber optic chemical film sensor based on fluorescence multiple quenching

    Institute of Scientific and Technical Information of China (English)

    陈坚; 李伟; 阎超; 袁立懋; 郭炬亮; 周新继

    1997-01-01

    The three types of structure of the pyrenebutyric acid of fiber optic chemical film sensor were stud-ied by fluorescence multiple quenching. They are, for different test samples and purposes, respectively general, three-way and combined. A tri-cup method was designed to demonstrate the multiple quenching of response mechanism, and a relationship formula of mathematical approach was established. The response mechanism was shown to include the dynamic quenching , inner-filter effects and/or resonance energy transfer. To show the response characterization in a series of organic and inorganic quenchers, a new concept of apparent quenching coefficient Kq was advanced. This kind of sensor has been used in continuous and in situ monitoring of the dissolution rate of drug tablets, on line and in situ monitoring of some organic therapeutic drugs in biological fluid and Cr( VI ) in industrial waste water. The measured data were examined and compared with HPLC or HPTLCS. Test results show that the sensors and appa

  17. Multi-Phenotypic subtyping of circulating tumor cells using sequential fluorescent quenching and restaining

    Science.gov (United States)

    Adams, Daniel L.; Alpaugh, R. Katherine; Tsai, Susan; Tang, Cha-Mei; Stefansson, Steingrimur

    2016-09-01

    In tissue biopsies formalin fixed paraffin embedded cancer blocks are micro-sectioned producing multiple semi-identical specimens which are analyzed and subtyped proteomically, and genomically, with numerous biomarkers. In blood based biopsies (BBBs), blood is purified for circulating tumor cells (CTCs) and clinical utility is typically limited to cell enumeration, as only 2–3 positive fluorescent markers and 1 negative marker can be used. As such, increasing the number of subtyping biomarkers on each individual CTC could dramatically enhance the clinical utility of BBBs, allowing in depth interrogation of clinically relevant CTCs. We describe a simple and inexpensive method for quenching the specific fluors of fluorescently stained CTCs followed by sequential restaining with additional biomarkers. As proof of principle a CTC panel, immunosuppression panel and stem cell panel were used to sequentially subtype individual fluorescently stained patient CTCs, suggesting a simple and universal technique to analyze multiple clinically applicable immunomarkers from BBBs.

  18. Binding of dicamba to soluble and bound extracellular polymeric substances (EPS) from aerobic activated sludge: a fluorescence quenching study.

    Science.gov (United States)

    Pan, Xiangliang; Liu, Jing; Zhang, Daoyong; Chen, Xi; Song, Wenjuan; Wu, Fengchang

    2010-05-15

    Binding of dicamba to soluble EPS (SEPS) and bound EPS (BEPS) from aerobic activated sludge was investigated using fluorescence spectroscopy. Two protein-like fluorescence peaks (peak A with Ex/Em=225 nm/342-344 nm and peak B with Ex/Em=275/340-344 nm) were identified in SEPS and BEPS. Humic-like fluorescence peak C (Ex/Em=270-275 nm/450-460 nm) was only found in BEPS. Fluorescence of the peaks A and B for SEPS and peak A for BEPS were markedly quenched by dicamba at all temperatures whereas fluorescence of peaks B and C for BEPS was quenched only at 298 K. A dynamic process dominated the fluorescence quenching of peak A of both SEPS and BEPS. Fluorescence quenching of peak B and C was governed a static process. The effective quenching constants (logK(a)) were 4.725-5.293 for protein-like fluorophores of SEPS and 4.23-5.190 for protein-like fluorophores of BEPS, respectively. LogK(a) for humic-like substances was 3.85. Generally, SEPS had greater binding capacity for dicamba than BEPS, and protein-like substances bound dicamba more strongly than humic-like substances. Binding of dicamba to SEPS and BEPS was spontaneous and exothermic. Electrostatic force and hydrophobic interaction forces play a crucial role in binding of dicamba to EPS.

  19. Dynamic quenchers in fluorescently labeled membranes. Theory for quenching in a three-phase system.

    Science.gov (United States)

    Omann, G M; Glaser, M

    1985-05-01

    The theory for quenching of fluorescently labeled membranes by dynamic quenchers is described for a three-phase system: a fluorescently labeled membrane, a nonlabeled membrane, and an aqueous phase. Two different experimental protocols are possible to determine quenching parameters. Using the first protocol, partition coefficients and bimolecular quenching constants were determined for a hydrophobic quencher in carbazole-labeled membranes in the presence of an unlabeled reference membrane. These parameters determined for 1,1-dichloro-2,2-bis(p-chlorophenyl)ethylene (DDE) using this three-phase analysis were in good agreement with values determined by a two-phase analysis without the reference lipid. Hence, the theory was verified. In the second protocol, the quencher partition coefficient was determined for unlabeled membranes in the presence of a carbazole-labeled reference membrane. Partition coefficients for DDE determined by this method were the same as partition coefficients determined for carbazole-labeled membranes using the two-phase analysis. The greater ease in determining partition coefficients and bimolecular quenching constants by the three-phase analysis and, in particular, the ability to determine the partition coefficient in unlabeled membranes make the three-phase analysis especially useful. This method was used to study the effect varying the membrane lipid composition has on the partition coefficient. The data indicate that partition coefficients of DDE in fluid membranes are not dramatically dependent upon polar head group composition, fatty acid composition, or cholesterol content. However, partitioning into gel-phase lipids is at least 100-fold less than fluid-phase lipids.

  20. Fluorescence quenching of coumarin 153 by hydroxyl-functionalized room temperature ionic liquids

    Science.gov (United States)

    Li, Shuang; Yu, Anchi; Lu, Rong

    2016-08-01

    Steady-state absorption and fluorescence as well as time-resolved fluorescence of coumarin 151 (C151) and coumarin 153 (C153) were measured in hydroxyl-functionalized ionic liquids ([HOEmim][BF4] and [HOEmim][N(CN)2]) and in nonhydroxyl-functionalized ionic liquids ([Emim][BF4] and [Emim][N(CN)2]). Both the steady-state fluorescence and time-resolved fluorescence observations reveal that hydroxyl-functionalized ionic liquid quenches the fluorescence of C153 while the nonhydroxyl-functionalized ionic liquid does not. We also measured the time-resolved fluorescence anisotropy of C151 and C153 in both [HOEmim][BF4] and [Emim][BF4]. It is found that the ratio of the rotational relaxation lifetime of C153 in [HOEmim][BF4] with respect to that in [Emim][BF4] is about 15% larger than that of C151 in [HOEmim][BF4] with respect to that in [Emim][BF4], indicating extra interaction between C153 and [HOEmim][BF4] exists except the effect of the viscosity of ionic liquid.

  1. Determination of protease subsite preference on SPOT peptide array by fluorescence quenching-based assay.

    Science.gov (United States)

    Kim, Do-Hyun; Shin, Dong-Sik; Lee, Yoon-Sik

    2012-06-01

    A peptide SPOT array was synthesized on a glass chip and used to determine protease subsite preference. To synthesize a peptide array for positional scanning, the ratio of the isokinetic concentration was determined for every Fmoc-amino acid except Cys. Based on this ratio, a peptide array consisting of Dabcyl-X-X-P(2)-Arg-X-X-X-Lys(FITC) (X: equimolar mixture of 19 amino acids, P(2): one of 19 amino acids) was synthesized on a chitosan-grafted glass chip. Subsequently, the peptide substrates on the array were hydrolyzed by thrombin to screen for subsite specificity using a fluorescence quenching-based assay. The P(2) subsite specificity of thrombin was screened by the fluorescence images obtained after hydrolysis. Pro at the P(2) subsite showed the highest specificity for thrombin based on both the fluorescence quenching-based assay and the solution phase assay. From these results, we confirmed that our mixture-based peptide SPOT array format on the chitosan-grafted glass chips could be used to determine protease subsite preference.

  2. Enhanced fluorescence quenching in an acridine orange - alizarin red system through matrine and its analytical application

    Science.gov (United States)

    Wei, Xiaoling; Wang, Xiaojun; Gong, Qi; Wang, Lisheng; Zhou, Shiwu

    2015-01-01

    This study shows that alizarin red (AR) only slightly quenched fluorescence for acridine orange (AO) in an AR/AO mixed solution at pH = 5-6. The reduced fluorescent signal was closely and linearly associated with the level of MT added to the system, which is the basis for a new quantitative MT assay method using the fluorescence quenching reaction in the AO-AR system. The results show that under optimal conditions, this method had a 14.9-43.5 mg L-1 linear detection range with a 1.38 mg L-1 detection limit and 1.24% precision. In addition, this method was used to determine the MT levels in the commercially available MT-containing pesticides and suppositories, which showed a 96.6-103% recovery. Therefore, this method has multiple advantages, including simple and fast operation, high accuracy and low cost. Moreover, herein, we investigated the underlying mechanism in-depth using an ultraviolet (UV) spectroscopic technique.

  3. Monitoring the Photosynthetic Apparatus During Space Flight: Interspecific Variation in Chlorophyll Fluorescence Signatures Induced by Different Root Zone Stresses

    Science.gov (United States)

    Bubenheim, David L.; Patterson, Mark T.; Kliss, Mark H. (Technical Monitor)

    1996-01-01

    Chlorophyll fluorescence has been used extensively as a tool to indicate stress to the photosynthetic apparatus in green plants. A rise in fluorescence has been attributed to the blockage of photosystem II photochemistry, and patterns of fluorescence decay (quenching) from dark adapted leaves can be related to specific photochemical and non-photochemical deexcitation pathways of light trapped by the photosynthetic apparatus and thus result in characteristically different fluorescence signatures. Four distantly related plant species, Hypocharis radicata (Asteraceae), Brassica rapa (Brassicaceae), Spinacea oleracea (Chenopodiaceae) and Triticum aestivum (Poaceae), were grown hydroponically for three weeks before the initiation of three different root zone stresses (10 mM Cu, 100 mM NaCl and nitrogen deficient nutrition). After 10 days, characteristic fluorescence signatures for each stress could be noted although the degree varied between species. Fast kinetics analysis showed a reduction in plastoquinone pool size for copper and nitrogen stress for all species but a more species specific result with NaCl stress. Photochemical quenching kinetics varied between species and stress treatments from no quenching in S. oleracea in copper treatments to increased photochemical quenching in NaCl treatments. Non-photochemical quenching kinetics demonstrated a distinct pattern between stresses for all species. Copper treatments characteristically exhibited a shallow, flat non-photochemical quenching profile suggesting a general blockage of electron transport whereas NaCl treatments exhibited a slow rising profile that suggested damage to thylakoid acidification kinetics and nitrogen deficiency exhibited a fast rising and declining profile that suggested an altered state 1-state 2 transition regulated by the phosphorylation of LHCII. These results demonstrate characteristic fluorescence signatures for specific plant stresses that may be applied to different, unrelated plant

  4. Fluorescence quenching study on the interaction of ferroferric oxide nanoparticles with bovine serum albumin

    Science.gov (United States)

    Hao, Changchun; Xu, Guangkuan; Feng, Ying; Lu, Linhao; Sun, Wenyuan; Sun, Runguang

    2017-09-01

    Fluorescence quenching was used to study the potential interaction mechanism of Bovine serum albumin (BSA) with either hydrophilic ferroferric oxide (Fe3O4) nanoparticles (NPs) or hydrophobic Fe3O4 NPs. The experimental results indicated the mechanism between BSA and hydrophilic Fe3O4 NPs was static quenching and the one between BSA and hydrophobic Fe3O4 NPs was dynamic process that was drove by Förster's resonance energy transfer (FRET). And the binding parameters for the interaction of BSA with either hydrophilic or hydrophobic Fe3O4 NPs were calculated by using the fluorescence quenching measurement. The binding constant (KA) values of hydrophilic Fe3O4 NPs were 8518.73 ± 23.35 (at 298 K), 1190.31 ± 15.41 (at 306 K) and 321.97 ± 8.57 (at 313 K), respectively. The thermodynamic analysis implied that the intermolecular forces between BSA and hydrophilic Fe3O4 NPs were Van der Waals interaction or hydrogen bond, because the values of ΔH and ΔS between them were negative. While the one of BSA and hydrophobic Fe3O4 NPs involved hydrophobic forces, owing to the positive ΔH and ΔS between them. But they were all enthalpy-driven and exothermic, since their ΔG values were all negative. Synchronous fluorescence spectroscopy suggested that the conformation of tryptophan residue of BSA was changed in the presence of hydrophilic Fe3O4 NPs or hydrophobic Fe3O4 NPs, because the position of the maximum emission wavelength had a discernible red shift.

  5. Rapid fluorometric determination of perfluorooctanoic acid by its quenching effect on the fluorescence of quantum dots

    Energy Technology Data Exchange (ETDEWEB)

    Liu, Qi; Huang, Aizhen; Wang, Nan, E-mail: nwang@hust.edu.cn; Zheng, Guan; Zhu, Lihua

    2015-05-15

    Analysis of perfluorooctanoic acid (PFOA) usually requires a combination of high-performance liquid chromatography and mass spectrometry, which is expensive and time-consuming. In the present work, water-soluble CdS quantum dots (QDs) were employed to develop a simple and rapid fluorometric method for the determination of PFOA. Strongly fluorescent CdS QDs were prepared by using 3-mercaptopropionic acid (MPA) as a stabilizer. It was observed that PFOA strongly quenched the fluorescence emission of the MPA-CdS QDs because PFOA promotes the aggregation of MPA-CdS QDs through a fluorine–fluorine affinity interaction. Under optimum conditions, the fluorescence intensity of MPA-CdS QDs was observed to decrease linearly with an increase in the concentration of PFOA from 0.5 to 40 μmol L{sup −1}, with a limit of detection of 0.3 μmol L{sup −1}. This new method was successfully implemented for the analysis of PFOA-spiked textile samples, with recoveries ranging from 95% to 113%. - Highlights: • PFOA significantly quenched the fluorescence emission of quantum dots (QDs). • A rapid and simple fluorescence sensor was proposed for determining PFOA by QDs. • PFOA determination could be completed within approximately 10 min. • The developed method had a working range of 0.5 to 40 μmol L{sup −1} and a detection limit of 0.3 μmol L{sup −1}.

  6. An investigation on fluorescence quenching of certain porphyrins by colloidal CdS

    Energy Technology Data Exchange (ETDEWEB)

    Asha Jhonsi, M.; Kathiravan, A. [School of Chemistry, Bharathidasan University, Tiruchirappalli 620 024, Tamil Nadu (India); Renganathan, R., E-mail: rrengas@yahoo.co [School of Chemistry, Bharathidasan University, Tiruchirappalli 620 024, Tamil Nadu (India)

    2009-08-15

    Certain porphyrin derivatives namely meso-tetraphenylporphyrin (TPP), meso-tetrakis(4-carboxyphenyl)porphyrin (TCPP), meso-tetrakis(4-sulfonatophenyl)porphyrin (TSPP) were examined as sensitizers for colloidal CdS. The interaction of these porphyrins and colloidal CdS were studied by absorption, infrared, steady state and time resolved fluorescence spectroscopy and transient absorption techniques. The apparent association constants (K{sub app}) resulting from adsorption of porphyrins on CdS surface were calculated from both absorption and fluorescence studies and they agree well. Using all the spectroscopic measurements we confirmed that the interaction between porphyrins and colloidal CdS occurs through ground state complex formation and the quenching follows static mechanism.

  7. Time-resolved fluorescence quenching studies of sodium lauryl ether sulfate micelles

    Energy Technology Data Exchange (ETDEWEB)

    Friedrich, Leidi C.; Silva, Volnir O.; Quina, Frank H., E-mail: quina@usp.br [Universidade de Sao Paulo (USP), Sao Paulo, SP (Brazil). Instituto de Quimica; Moreira Junior, Paulo F. [Universidade de Sao Paulo (USP), Sao Paulo, SP (Brazil). Escola Politecnica. Departamento de Engenharia Quimica; Tcacenco, Celize M. [Fundacao Instituto de Ensino para Osasco (FIEO/UNIFIEO), SP (Brazil). Centro Universitario FIEO. Centro de Estudos Quimicos

    2013-02-15

    Aggregation numbers (N{sub Ag}) of micelles of the commercial anionic detergent sodium lauryl ether sulfate (SLES), with an average of two ethylene oxide subunits, were determined at 30 and 40 deg C by the time-resolved fluorescence quenching method with pyrene as the fluorescent probe and the N-hexadecylpyridinium ion as the quencher. The added-salt dependent growth of SLES micelles ({gamma} = 0.11-0.15, where {gamma} is the slope of a plot of log aggregation number vs. log [Y{sub aq}] and [Y{sub aq}] is the sodium counterion concentration free in the intermicellar aqueous phase) is found to be significantly lower than that of sodium alkyl sulfate micelles ({gamma} ca. 0.25), a difference attributed to the larger headgroup size of SLES. The I{sub 1}/I{sub 3} vibronic intensity ratio and the rate constant for intramicellar quenching of pyrene show that the pyrene solubilization microenvironment and the intramicellar microviscosity are insensitive to micelle size or the presence of added salt. (author)

  8. Fluorescent proteins as biosensors by quenching resonance energy transfer from endogenous tryptophan: detection of nitroaromatic explosives.

    Science.gov (United States)

    Gingras, Alexa; Sarette, Joseph; Shawler, Evan; Lee, Taeyoung; Freund, Steve; Holwitt, Eric; Hicks, Barry W

    2013-10-15

    Ensuring domestic safety from terrorist attack is a daunting challenge because of the wide array of chemical agents that must be screened. A panel of purified fluorescent protein isoforms (FPs) was screened for the ability to detect various explosives, explosive simulants, and toxic agents. In addition to their commonly used visible excitation wavelengths, essentially all FPs can be excited by UV light at 280 nm. Ultraviolet illumination excites electrons in endogenous tryptophan (W) residues, which then relax by Förster Resonance Energy Transfer (FRET) to the chromophore of the FP, and thus the FPs emit with their typical visible spectra. Taking advantage of the fact that tryptophan excitation can be quenched by numerous agents, including nitroaromatics like TNT and nitramines like RDX, it is demonstrated that quenching of visible fluorescence from UV illumination of FPs can be used as the basis for detecting these explosives and explosive degradation products. This work provides the foundation for production of an array of genetically-modified FPs for in vitro biosensors capable of rapid, simultaneous, sensitive and selective detection of a wide range of explosive or toxic agents. Published by Elsevier B.V.

  9. Time-resolved fluorescence quenching studies of sodium lauryl ether sulfate micelles

    Energy Technology Data Exchange (ETDEWEB)

    Friedrich, Leidi C.; Silva, Volnir O.; Quina, Frank H., E-mail: quina@usp.br [Universidade de Sao Paulo (USP), Sao Paulo, SP (Brazil). Instituto de Quimica; Moreira Junior, Paulo F. [Universidade de Sao Paulo (USP), Sao Paulo, SP (Brazil). Escola Politecnica. Departamento de Engenharia Quimica; Tcacenco, Celize M. [Fundacao Instituto de Ensino para Osasco (FIEO/UNIFIEO), SP (Brazil). Centro Universitario FIEO. Centro de Estudos Quimicos

    2013-02-15

    Aggregation numbers (N{sub Ag}) of micelles of the commercial anionic detergent sodium lauryl ether sulfate (SLES), with an average of two ethylene oxide subunits, were determined at 30 and 40 deg C by the time-resolved fluorescence quenching method with pyrene as the fluorescent probe and the N-hexadecylpyridinium ion as the quencher. The added-salt dependent growth of SLES micelles ({gamma} = 0.11-0.15, where {gamma} is the slope of a plot of log aggregation number vs. log [Y{sub aq}] and [Y{sub aq}] is the sodium counterion concentration free in the intermicellar aqueous phase) is found to be significantly lower than that of sodium alkyl sulfate micelles ({gamma} ca. 0.25), a difference attributed to the larger headgroup size of SLES. The I{sub 1}/I{sub 3} vibronic intensity ratio and the rate constant for intramicellar quenching of pyrene show that the pyrene solubilization microenvironment and the intramicellar microviscosity are insensitive to micelle size or the presence of added salt. (author)

  10. Fluorescence quenching study of quercetin interaction with bovine milk xanthine oxidase

    Science.gov (United States)

    Rasoulzadeh, Farzaneh; Jabary, Hamideh Nadjarpour; Naseri, Abdolhossein; Rashidi, Mohammad-Reza

    2009-02-01

    Quercetin is a natural flavonoid with many important therapeutic properties. The interaction of this polyphenolic compound bovine milk xanthine oxidase as one of its major target proteins was studied using fluorescence quenching method for the first time. It was found that the fluorescence quenching of xanthine oxidase occurs through a static mechanism. The results revealed the presence of a single binding site on xanthine oxidase with the binding constant value equals to 1.153 × 10 4 l mol -1 at 310 K and pH 7.4. The thermodynamic parameters were also calculated at different temperatures. The enthalpy and entropy changes were found as -10.661 kJ mol -1 and +43.321 J mol -1 K -1 indicating that both hydrogen binding and hydrophobic are involved in the interaction of this polyphenolic natural compound with xanthine oxidase. The results may provide a ground for further studies with different flavonoids to find a safe alternative for allopurinol, the only xanthine oxidase inhibitor with clinical application.

  11. MagiProbe: a novel fluorescence quenching-based oligonucleotide probe carrying a fluorophore and an intercalator

    OpenAIRE

    Yamane, Akio

    2002-01-01

    Fluorescence is the favored signaling technology for molecular diagnoses. Fluorescence energy transfer-based methods are powerful homogeneous assay tools. A novel oligonucleotide probe, named MagiProbe, which is simple to use, is described, and information given about the duplex formed with a target. The probe internally has a fluorophore and an intercalator. Its fluorescence is quenched by the intercalator in the absence of a target sequence. On hybridization with a target sequence, the prob...

  12. Center for Fluorescence Spectroscopy: advanced studies of fluorescence dynamics, lifetime imaging, clinical sensing, two-photon excitation, and light quenching

    Science.gov (United States)

    Lakowicz, Joseph R.; Malak, Henryk M.; Gryczynski, Ignacy; Szmacinski, Henryk; Kusba, Jozef; Akkaya, Engin; Terpetschnig, Ewald A.; Johnson, Michael L.

    1994-08-01

    The Center for Fluorescence Spectroscopy (CFS) is a multi-user facility providing state of the art time-resolved fluorescence instrumentation and software for scientists, whose research can be enhanced by such experimental data. The CFS is a national center, supported by the National Center for Research Resources Division of the National Institutes of Health, and in part by the National Science Foundation. Both time-domain (TD) and frequency- domain (FD) measurements (10 MHz to 10 Ghz) are available, with a wide range of excitation and emission wavelengths (UV to NIR). The data can be used to recover distances and site-to-site diffusion in protein, interactions between macromolecules, accessibility of fluorophores to quenchers, and the dynamic properties of proteins, membranes and nucleic acids. Current software provides for analysis of multi-exponential intensity and anisotropy decays, lifetime distribution, distance distributions for independent observation of fluorescence donors and acceptors, transient effects in collisional quenching, phase-modulation spectra and time-resolved emission spectra. Most programs provide for global analysis of multiple data sets obtained under similar experimental conditions. Data can be analyzed on-site by connection with the CFS computers through the internet. During six years of operation we have established scientific collaborations with over 30 academic and industrial groups in the United States. These collaborations have resulted in 63 scientific papers.

  13. Folded or nonfolded fluorophores incorporating naphthalene:Their fluorescent quenching driven by charge transfer or co-aggregation in the aqueous-organic binary solvent

    Institute of Scientific and Technical Information of China (English)

    2010-01-01

    Folded or nonfolded fluorophores incorporating naphthalene were synthesized and characterized by steady state fluorescence technique.Paraquat as an excellent quenching reagent quenched the fluorescence of Nel6 or nDs(n = 1-4) driven by charge transfer.Under aggregation of nDs,α-CD did not quench the fluorescence of 1D.At lower concentration,the quenching tendency ofα-CD against nDs is 2D>3D>4D,while at higher concentration,the tendency is 2D<3D<4D.α-CD showed the selective recognition on its fluorescent ...

  14. Solvatochromic study of highly fluorescent alkylated isocyanonaphthalenes, their π-stacking, hydrogen-bonding complexation, and quenching with pyridine.

    Science.gov (United States)

    Nagy, Miklós; Rácz, Dávid; Lázár, László; Purgel, Mihály; Ditrói, Tamás; Zsuga, Miklós; Kéki, Sándor

    2014-11-10

    Mono- and dialkylated derivatives of 1-amino-5-isocyanonaphthalene (ICAN) were studied as new members of a multifunctional, easy-to-prepare fluorophore family, which showed excellent solvatochromic properties. The monoallyl derivative and the starting ICAN exhibited strong fluorescence quenching in the presence of small amounts of pyridine. The formation of a hydrogen-bonded ground-state pyridine complex was detected; however, analysis of quantum chemical calculations suggested the presence of an additional π-stacked pyridine complex. The Stern-Volmer plot of the quenching process exhibited a downward curvature and after reaching a minimum the fluorescence intensity increased back to a significant level at high pyridine concentrations. Significant fluorescence was observed even in pure pyridine. A new mechanism and a simple mathematical equation were derived to explain the downward curvature and the remaining fluorescence by the formation of a fluorescent π-stacked complex.

  15. Fluorescence quenching of CdS quantum dots by 4-azetidinyl-7-nitrobenz-2-oxa-1,3-diazole: a mechanistic study.

    Science.gov (United States)

    Santhosh, Kotni; Patra, Satyajit; Soumya, S; Khara, Dinesh Chandra; Samanta, Anunay

    2011-10-24

    Fluorescence quenching of CdS quantum dots (QDs) by 4-azetidinyl-7-nitrobenz-2-oxa-1,3-diazole (NBD), where the two quenching partners satisfy the spectral overlap criterion necessary for Förster resonance energy transfer (FRET), is studied by steady-state and time-resolved fluorescence techniques. The fluorescence quenching of the QDs is accompanied by an enhancement of the acceptor fluorescence and a reduction of the average fluorescence lifetime of the donor. Even though these observations are suggestive of a dynamic energy transfer process, it is shown that the quenching actually proceeds through a static interaction between the quenching partners and is probably mediated by charge-transfer interactions. The bimolecular quenching rate constant estimated from the Stern-Volmer plot of the fluorescence intensities, is found to be exceptionally high and unrealistic for the dynamic quenching process. Hence, a kinetic model is employed for the estimation of actual quencher/QD ratio dependent exciton quenching rate constants of the fluorescence quenching of CdS by NBD. The present results point to the need for a deeper analysis of the experimental quenching data to avoid erroneous conclusions.

  16. A comparative study on fluorescence quenching of CdTe nanocrystals with a serial of polycyclic aromatic hydrocarbons

    Energy Technology Data Exchange (ETDEWEB)

    Baslak, Canan, E-mail: cananbaslak@gmail.com [Advanced Technology Research and Application Center, Selcuk University, 42075 Konya (Turkey); Department of Chemistry, Faculty of Science, Selcuk University, 42075 Konya (Turkey); Kus, Mahmut, E-mail: mahmutkus1@gmail.com [Advanced Technology Research and Application Center, Selcuk University, 42075 Konya (Turkey); Department of Chemical Engineering, Faculty of Engineering, Selcuk University, 42075 Konya (Turkey); Cengeloglu, Yunus [Department of Chemistry, Faculty of Science, Selcuk University, 42075 Konya (Turkey); Ersoz, Mustafa [Advanced Technology Research and Application Center, Selcuk University, 42075 Konya (Turkey); Department of Chemistry, Faculty of Science, Selcuk University, 42075 Konya (Turkey)

    2014-09-15

    We report sensing different polycyclic aromatic hydrocarbons (PAHs) with colloidal CdTe nanocrystals. The effect of molecular structure on quenching rate for 2-hyroxy-1-naphthaldehyde (2H–1N), 9,10-phenanthraquinone (PQ), 9-anthracenecarboxaldehyde (9-AC) and quinoline (Q) is presented. The quenching rate constants are observed to be strongly dependent on the molecular structure. PQ, consisting of two carbonyl groups, shows the highest rate constant while Q shows the worst one. Both static and dynamic quenching are simultaneously observed for PQ and 2H–1N. Therefore extended Stern–Volmer equations are used to calculate rate constants. Results showed that dynamic quenching is a dominant process. The rate constants for PQ, 2H–1N, 9-AC and Q are calculated to be 64.84, 10.73, 10.66 and 1.85 respectively. - Highlights: • We report the fluorescence quenching of colloidal CdTe nanocrystals with different polycyclic aromatic hydrocarbons. • The quenching rate constants are observed to be strongly dependent on the molecular structure. • Static and dynamic quenching are simultaneously observed. • The best quenching was observed for 9,10-phenanthraquinone.

  17. Which model based on fluorescence quenching is suitable to study the interaction between trans-resveratrol and BSA?

    Science.gov (United States)

    Wei, Xin Lin; Xiao, Jian Bo; Wang, Yuanfeng; Bai, Yalong

    2010-01-01

    There are several models by means of quenching fluorescence of BSA to determine the binding parameters. The binding parameters obtained from different models are quite different from each other. Which model is suitable to study the interaction between trans-resveratrol and BSA? Herein, twelve models based fluorescence quenching of BSA were compared. The number of binding sites increasing with increased binding constant for similar compounds binding to BSA maybe one approach to resolve this question. For example, here eleven flavonoids were tested to illustrate that the double logarithm regression curve is suitable to study binding polyphenols to BSA.

  18. Fiber-optic fluorescence-quenching oxygen partial pressure sensor using platinum octaethylporphyrin.

    Science.gov (United States)

    Davenport, John J; Hickey, Michelle; Phillips, Justin P; Kyriacou, Panayiotis A

    2016-07-20

    The development and bench testing of a fiber-optic oxygen sensor is described. The sensor is designed for measurement of tissue oxygen levels in the mucosa of the digestive tract. The materials and construction are optimized for insertion through the mouth for measurement in the lower esophagus. An oxygen-sensitive fluorescence-quenching film was applied as a solution of platinum octaethylporphyrin (PtOEP) poly(ethyl methacrylate) (PEMA) and dichloromethane and dip coated onto the distal tip of the fiber. The sensor was tested by comparing relative fluorescence when immersed in liquid water at 37°C, at a range of partial pressures (0-101 kPa). Maximum relative fluorescence at most oxygen concentrations was seen when the PtOEP concentration was 0.1  g.L-1, four layers of coating solution were applied, and a fiber core radius of 600 μm was selected, giving a Stern-Volmer constant of 0.129  kPa-1. The performance of the sensor is suitable for many in vivo applications, particularly mucosal measurements. It has sufficient sensitivity, is sterilizable, and is sufficiently flexible and robust for insertion via the mouth without damage to the probe or risk of harm to the patient.

  19. Complexation of fluoroquinolone antibiotics with human serum albumin: A fluorescence quenching study

    Energy Technology Data Exchange (ETDEWEB)

    Seedher, Neelam, E-mail: nseedher@yahoo.co [Department of Chemistry, Panjab University, Chandigarh 160014 (India); Agarwal, Pooja [Department of Chemistry, Panjab University, Chandigarh 160014 (India)

    2010-10-15

    Mechanism of interaction and detailed physico-chemical characterization of the binding of four fluoroquinolones: levofloxacin, sparfloxacin, ciprofloxacin HCl and enrofloxacin with human serum albumin has been studied at physiological pH (7.4) using fluorescence spectroscopic technique. The stoichiometry of interaction was found to be 1:1 for all the drugs used. The association constants for the interaction were of the order of 10{sup 4} in most cases. At low drug:protein ratios, a significant fraction of the added drug was bound. The predominant interactions involved are hydrogen bonding and Van der Waal's interactions in the case of levofloxacin, hydrophobic interactions in the case of ciprofloxacin hydrochloride and enrofloxacin and hydrogen bonding, hydrophobic and electrostatic interactions in the case of sparfloxacin. The drug binding region did not coincide with that of the hydrophobic probe, 1-anilinonaphthalene-8-sulfonate (ANS). From the displacement of site-specific probes and site-marker drugs, it was concluded that ciprofloxacin hydrochloride is site II-specific while enrofloxacin is a site I-specific drug. Levofloxacin binds at both site I and site II with equal affinity. Sparfloxacin had higher affinity for site II than site I. It is also possible that sparfloxacin binds at the interface between site I and site II. Stern-Volmer analysis of the data showed that the quenching mechanism is predominantly collisional for the binding of ciprofloxacin HCl and enrofloxacin while both static and collisional quenching mechanisms are operative in the case of levofloxacin and sparfloxacin. High magnitude of the rate constant for quenching showed that the process is not entirely diffusion controlled. Circular dichroism (CD) spectroscopic studies showed that the presence of drugs did not cause any major changes in the secondary structure of HSA.

  20. Fluorescence quenching and spectrophotometric methods for the determination of daunorubicin with meso-tera (4-sulphophenyl) porphyrin as probe.

    Science.gov (United States)

    Tian, Jing; Liu, Shaopu; Liu, Zhongfang; Yang, Jidong; Zhu, Jinghui; Qiao, Man; Hu, Xiaoli

    2014-01-01

    In this work, a synthetic meso-tera (4-sulfophenyl) porphyrin (TPPS4) was used as a probe to determine daunorubicin (DNR) by fluorescence quenching and spectrophotometric methods. At pH 4.6 potassium acid phthalate-NaOH buffer solution, a 1:1 complex of DNR interacted with TPPS4 formed via the electrostatic attractions and hydrophobic interactions, thus resulted in TPPS4 fluorescence quenching and absorption spectra change. The maximum excitation wavelength (λex) and the maximum emission wavelength (λem) are 435 nm and 672 nm, respectively. The fluorescence quenching values (ΔF) are the good linear relationship to the concentration of DNR in the range of 0.8-6.0 mgL(-1). The method exhibits high sensitivity with the detection limit (3σ) being 27.0 ng mL(-1). Meanwhile, a decrease of absorbance is detected at 433 nm with the appearance of a new absorption peak at 420 nm. The optimum reaction conditions, influencing factors and the effect of coexisting substances have been investigated in our experiment. The results showed that the method had a good selectivity and could be applied to determine DNR in serum and urine samples. In addition, the combine ratio between DNR and TPPS4 was measured and the charge distribution before and after reaction was calculated by quantum chemistry calculation AM1 method. The type of fluorescence quenching was discussed by the absorption spectra change, Stern-Volmer plots and fluorescence lifetime determination.

  1. Multiplex fluorescence melting curve analysis for mutation detection with dual-labeled, self-quenched probes.

    Directory of Open Access Journals (Sweden)

    Qiuying Huang

    Full Text Available Probe-based fluorescence melting curve analysis (FMCA is a powerful tool for mutation detection based on melting temperature generated by thermal denaturation of the probe-target hybrid. Nevertheless, the color multiplexing, probe design, and cross-platform compatibility remain to be limited by using existing probe chemistries. We hereby explored two dual-labeled, self-quenched probes, TaqMan and shared-stem molecular beacons, in their ability to conduct FMCA. Both probes could be directly used for FMCA and readily integrated with closed-tube amplicon hybridization under asymmetric PCR conditions. Improved flexibility of FMCA by using these probes was illustrated in three representative applications of FMCA: mutation scanning, mutation identification and mutation genotyping, all of which achieved improved color-multiplexing with easy probe design and versatile probe combination and all were validated with a large number of real clinical samples. The universal cross-platform compatibility of these probes-based FMCA was also demonstrated by a 4-color mutation genotyping assay performed on five different real-time PCR instruments. The dual-labeled, self-quenched probes offered unprecedented combined advantage of enhanced multiplexing, improved flexibility in probe design, and expanded cross-platform compatibility, which would substantially improve FMCA in mutation detection of various applications.

  2. Influence of the excitation light intensity on the rate of fluorescence quenching reactions: pulsed experiments.

    Science.gov (United States)

    Angulo, Gonzalo; Milkiewicz, Jadwiga; Kattnig, Daniel; Nejbauer, Michał; Stepanenko, Yuriy; Szczepanek, Jan; Radzewicz, Czesław; Wnuk, Paweł; Grampp, Günter

    2017-02-22

    The effect of multiple light excitation events on bimolecular photo-induced electron transfer reactions in liquid solution is studied experimentally. It is found that the decay of fluorescence can be up to 25% faster if a second photon is absorbed after a first cycle of quenching and recombination. A theoretical model is presented which ascribes this effect to the enrichment of the concentration of quenchers in the immediate vicinity of fluorophores that have been previously excited. Despite its simplicity, the model delivers a qualitative agreement with the observed experimental trends. The original theory by Burshtein and Igoshin (J. Chem. Phys., 2000, 112, 10930-10940) was created for continuous light excitation though. A qualitative extrapolation from the here presented pulse experiments to the continuous excitation conditions lead us to conclude that in the latter the order of magnitude of the increase of the quenching efficiency upon increasing the light intensity of excitation, must also be on the order of tens of percent. These results mean that the rate constant for photo-induced bimolecular reactions depends not only on the usual known factors, such as temperature, viscosity and other properties of the medium, but also on the intensity of the excitation light.

  3. Study of Interaction Between Tryptophan, Tyrosine, and Phenylalanine Separately with Silver Nanoparticles by Fluorescence Quenching Method

    Science.gov (United States)

    Roy, S.; Das, T. K.

    2015-09-01

    Using the spectroscopic method, the individual interaction of the three biochemically important amino acids, which are constituents of protein, namely, tryptophan, tyrosine, and phenylalanine with biologically synthesized silver nanoparticles has been investigated. The obtained UV-Vis spectra show the formation of ground-state complexes between tryptophan, tyrosine, and phenylalanine with silver nanoparticles. Silver nanoparticles possess the ability to quench the intrinsic fluorescence of the aforesaid amino acids by a dynamic quenching process. The binding constant, number of binding sites, and corresponding thermodynamic parameters (Δ H, Δ S, and Δ G) based on the interaction system were calculated for 293, 303, and 313 K. In the case of tryptophan and phenylalanine, with increase in temperature, the binding constant K was found to decrease; conversely, it was found to increase with increase in temperature in the case of tyrosine. The thermodynamic results revealed that the binding process was spontaneous; hydrogen bonding and van der Waals interaction were the predominant forces responsible for the complex stabilization in the case of tryptophan and phenylalanine, respectively, whereas in the case of tyrosine, hydrophobic interaction was the sole force conferring stability. Moreover, the Förster non-radiation energy transfer theory has been applied to calculate the average binding distance among the above amino acids and silver nanoparticles. The results show a binding distance of <7 nm, which ensures that energy transfer does occur between the said amino acids and silver nanoparticles.

  4. A High-Performance Fluorescence Immunoassay Based on the Relaxation of Quenching, Exemplified by Detection of Cardiac Troponin I

    Directory of Open Access Journals (Sweden)

    Seung-Wan Kim

    2016-05-01

    Full Text Available The intramolecular fluorescence self-quenching phenomenon is a major drawback in developing high-performance fluorometric biosensors which use common fluorophores as signal generators. We propose two strategies involving liberation of the fluorescent molecules by means of enzymatic fragmentation of protein or dehybridization of double-stranded DNA. In the former, bovine serum albumin (BSA was coupled with the fluorescent BODIPY dye (Red BSA, and then immobilized on a solid surface. When the insolubilized Red BSA was treated with proteinase K (10 units/mL for 30 min, the fluorescent signal was significantly increased (3.5-fold compared to the untreated control. In the second case, fluorophore-tagged DNA probes were linked to gold nanoparticles by hybridization with capture DNA strands densely immobilized on the surface. The quenched fluorescence signal was recovered (3.7-fold by thermal dehybridization, which was induced with light of a specific wavelength (e.g., 530 nm for less than 1 min. We next applied the Red BSA self-quenching relaxation technique employing enzymatic fragmentation to a high-performance immunoassay of cardiac troponin I (cTnI in a microtiter plate format. The detection limit was 0.19 ng/mL cTnI, and the fluorescent signal was enhanced approximately 4.1-fold compared with the conventional method of direct measurement of the fluorescent signal from a non-fragmented fluorophore-labeled antibody.

  5. [Fluorescence quenching method for the determination of p-hydroxyphenylpyruvic acid].

    Science.gov (United States)

    Wu, F; Fu, M; Wei, X; Yang, W; Hu, R; Guo, L

    2001-06-01

    A fluorescence quenching method for the determination of p-hydroxyphenylpyruvic acid with trytophan in the medium pH 11.01 NH3-NH4Cl is studied. The calibration curve is linear for p-hydroxyphenylpyruvic acid from 0 to 15 micrograms.mL-1 with lambda ex/lambda em = 285/356 nm. The detection limit is 0.37 microgram.mL-1. Twenty replicate determinations of solutions containing 10 micrograms.mL-1 p-hydroxyphenylpyruvic acid show a relative standard deviation of 1.2%. This method can be applied to the determination of p-hydroxyphenylpyruvic acid in serum with satisfactory results.

  6. Fluorescence lifetime and acrylamide quenching studies of the interactions between troponin subunits.

    Science.gov (United States)

    Leavis, P C; Gowell, E; Tao, T

    1984-08-28

    Fluorescence lifetime and acrylamide quenching studies were carried out to characterize the interactions between the subunits of troponin under various conditions of metal ion binding. Troponin C was labeled at Cys-98 with N-(iodoacetyl)-N'-(5-sulfo-1-naphthyl)ethylenediamine. In the presence of Ca2+, the fluorescence decay of labeled troponin C (TnC*) was monoexponential, lifetime tau = 15.5 ns and quenching rate constant kq = 2.97 X 10(8) M-1 s-1. In the absence of Ca2+, the decay was resolvable into a major component with tau = 11.9 ns and a minor component with tau = 20.5 ns, with corresponding values of kq = 4.80 X 10(8) and 0.66 X 10(8) M-1 s-1, respectively. Upon the binding of either troponin I (TnI) or troponin T (TnT) in the presence of Ca2+, tau increased to approximately 18 ns, and kq decreased to approximately 0.8 X 10(8) M-1 s-1. For the Ca2+ form of the TnC*-TnI-TnT ternary complex, values of tau = 17.6 ns and kq = 1.73 X 10(8) M-1 s-1 were obtained. These values did not vary significantly when Ca2+ was removed, or when Mg2+ replaced Ca2+. These findings were interpreted as follows: the region around Cys-98 of TnC* adopts a looser conformation upon the removal of Ca2+ from the high-affinity sites. Both TnI and TnT bind to TnC* in the region containing Cys-98. The probe is shielded from the solvent to a greater extent in the binary complexes than in the ternary complex.(ABSTRACT TRUNCATED AT 250 WORDS)

  7. Fluorescence-quenching study of glucose binding by yeast hexokinase isoenzymes

    Energy Technology Data Exchange (ETDEWEB)

    Feldman, I.; Kramp, D.C.

    1978-04-18

    A study of the effect of varying ionic strength on the glucose-induced quenching of tryptophan fluorescence of hexokinase isoenzymes A(P-I) and B(P-II) was carried out at pH 8.3 and pH 5.5. At pH 8.3 both isoenzymes gave apparently linear Scatchard-type data plots even with protein concentrations and ionic strengths for which both dimeric and monomeric forms of hexokinase coexist in significant amounts. Taking into account a 1 percent accuracy in the experimental measurements, we concluded that the intrinsic dissociation constants, K/sub M/ and K/sub D/, for the binding of glucose to the monomeric and dimeric forms of HkB, are within a factor of two of each other, i.e., K/sub D//K/sub M/ equal to or less than 2. The values of K/sub M/, estimated from the apparent K, were so greatly influenced by ionic strength that it is clear that it is meaningless to compare K/sub M/ and K/sub D/ values measured at different ionic strengths as has been done in the literature. Curvature in the pH 5.5 fluorescence-quenching plots for relatively low ionic strengths demonstrates cooperativity for glucose-binding to the dimer, positive for HkA but negative for HkB. In contrast, the binding is relatively noncooperative at high ionic strength at this pH. These results were attributed to the well known effect of salt-neutralization of side chain electrical charges on the flexibility and compactness of proteins.

  8. Intracellular Disassembly of Self-Quenched Nanoparticles Turns NIR Fluorescence on for Sensing Furin Activity in Cells and in Tumors.

    Science.gov (United States)

    Yuan, Yue; Zhang, Jia; Cao, Qinjingwen; An, Linna; Liang, Gaolin

    2015-06-16

    There has been no report on enzyme-controlled disassembly of self-quenched NIR fluorescent nanoparticles turning fluorescence on for specific detection/imaging of the enzyme's activity in vitro and in vivo. Herein, we reported the rational design of new NIR probe 1 whose fluorescence signal was self-quenched upon reduction-controlled condensation and subsequent assembly of its nanoparticles (i.e., 1-NPs). Then disassembly of 1-NPs by furin turned the fluorescence on. Employing this enzymatic strategy, we successfully applied 1-NPs for NIR detection of furin in vitro and NIR imaging furin activity in living cells. Moreover, we also applied 1-NPs for discriminative NIR imaging of MDA-MB-468 tumors in nude mice. This NIR probe 1 might be further developed for tumor-targeted imaging in routine preclinical studies or even in patients in the future.

  9. Self-quenched covalent fluorescent dye-nucleic acid conjugates as polymeric substrates for enzymatic nuclease assays.

    Science.gov (United States)

    Trubetskoy, Vladimir S; Hagstrom, James E; Budker, Vladimir G

    2002-01-01

    A fluorescent method is described for assessing nuclease activity. The technique is based on the preparation of quenched fluorophore-nucleic acid covalent conjugates and their subsequent dequenching due to degradation by nucleases. The resulting fluorescence increase can be measured by a spectrofluorometer and exhibits subpicogram per milliliter sensitivity level for RNase A and low picogram per milliliter level for DNase I. The method is adaptable for quantitative nuclease inhibitor testing.

  10. Quenching of fluorescence by crystal violet and its use to differentiate between surface-bound and internalized bacteria

    Science.gov (United States)

    Mathew, S.; Lim, Y. C.; Kishen, A.

    2008-06-01

    Phagocytosis is a complex process involving attachment, ingestion and intracellular processing of bacteria by phagocytes. A great difficulty in the evaluation of this process is to differentiate between attachment of the particles to the cell surface and internalization of the particles by the cells. Various techniques have been used to differentiate internalized and surface-attached bacteria in cultured cells, but only a few permit differentiations between surface-bound and internalized bacteria. In this study the quenching of fluorescence by crystal violet on acridine orange stained bacterial biofilm and planktonic bacterial cells is used to differentiate between surface-bound and internalized bacteria within macrophages. Method: One week old Enterococcus faecalis biofilm was grown on perspex and glass substrates in All-Culture medium (nutrient-rich condition) and phosphate buffered saline (nutrient-deprived condition). As model systems, human monocytic (THP-1) and histiocytic (U937) cell lines were used. These cell lines were incubated with the biofilm bacteria for 4 hrs in CO II incubator at 37 °C. The cells and bacteria were stained with acridine orange and quenched with crystal violet to distinguish between surface-bound and internalized bacteria. Results: The presence of green-fluorescing internalized bacteria was detected within the macrophages under the planktonic, nutrient-rich and nutrient-deprived biofilm conditions. All infecting bacteria take up acridine orange and fluoresced green, crystal violet quenched the fluorescence of extra-cellular adhering bacteria so that only fluorescent intracellular bacteria would be visible under fluorescent light microscopy.

  11. Measuring Norfloxacin Binding to Trypsin Using a Fluorescence Quenching Assay in an Upper-Division, Integrated Laboratory Course

    Science.gov (United States)

    Hicks, Katherine A.

    2016-01-01

    Fluorescence quenching assays are often used to measure dissociation constants that quantify the binding affinity between small molecules and proteins. In an upper-division undergraduate laboratory course, where students work on projects using a guided inquiry-based approach, a binding titration experiment at physiological pH is performed to…

  12. Fluorescence Aggregation-Caused Quenching versus Aggregation-Induced Emission: A Visual Teaching Technology for Undergraduate Chemistry Students

    Science.gov (United States)

    Ma, Xiaofeng; Sun, Rui; Cheng, Jinghui; Liu, Jiaoyan; Gou, Fei; Xiang, Haifeng; Zhou, Xiangge

    2016-01-01

    A laboratory experiment visually exploring two opposite basic principles of fluorescence of aggregation-caused quenching (ACQ) and aggregation-induced emission (AIE) is demonstrated. The students would prepared two salicylaldehyde-based Schiff bases through a simple one-pot condensation reaction of one equiv of 1,2-diamine with 2 equiv of…

  13. Measuring Norfloxacin Binding to Trypsin Using a Fluorescence Quenching Assay in an Upper-Division, Integrated Laboratory Course

    Science.gov (United States)

    Hicks, Katherine A.

    2016-01-01

    Fluorescence quenching assays are often used to measure dissociation constants that quantify the binding affinity between small molecules and proteins. In an upper-division undergraduate laboratory course, where students work on projects using a guided inquiry-based approach, a binding titration experiment at physiological pH is performed to…

  14. On the polyphasic quenching kinetics of chlorophyll a fluorescence in algae after light pulses of variable length.

    Science.gov (United States)

    Vredenberg, Wim; Prasil, Ondrej

    2013-11-01

    This study reports on kinetics of the fluorescence decay in a suspension of the alga Scenedesmus quadricauda after actinic illumination. These are monitored as the variable fluorescence signal in the dark following light pulses of variable intensity and duration. The decay reflects the restoration of chlorophyll fluorescence quenching of the photosystem II (PSII) antennas and shows a polyphasic pattern which suggests the involvement of different processes. The overall quenching curve after a fluorescence-saturating pulse (SP) of 250-ms duration, commonly used in pulse amplitude modulation applications as the tool for estimating the maximal fluorescence (F m), has been termed P-O, in which P and O have the same meaning as used in the OJIP induction curve in the light. Deconvolution of this signal shows at least three distinguishable exponential phases with reciprocal rate constants of the order of 10, 10(2), and 10(3) ms. The size of the long (>10(3) ms) and moderate (~10(2) ms) lasting components relative to the complete quenching signal after an SP increases with the duration of the actinic pulse concomitantly with an increase in the reciprocal rate constants of the fast (~10 ms) and moderate quenching phases. Fluorescence responses upon single turnover flashes of 30-μs duration (STFs) given at discrete times during the P-O quenching were used as tools for identifying the quencher involved in the P-O quenching phase preceding the STF excitation. Results are difficult to interpret in terms of a single-hit two-state trapping mechanism with distinguishable quenching properties of open and closed reaction centers only. They give support for an earlier hypothesis on a double-hit three-state trapping mechanism in which the so-called semi-closed reaction centers of PSII are considered. In these trapping-competent centers the single reduced acceptor pair [PheQ A](1-), depending on the size of photoelectrochemically induced pH effects on the Q B-binding site

  15. Cellular Activation of the Self-Quenched Fluorescent Reporter Probe in Tumor Microenvironment

    Directory of Open Access Journals (Sweden)

    Alexei A. Bogdanov, Jr.

    2002-01-01

    Full Text Available The effect of intralysosomal proteolysis of near-infrared fluorescent (NIRF self-quenched macromolecular probe (PGC-Cy5.5 has been previously reported and used for tumor imaging. Here we demonstrate that proteolysis can be detected noninvasively in vivo at the cellular level. A codetection of GFP fluorescence (using two-photon excitation and NIRF was performed in tumor-bearing animals injected with PGC-Cy5.5. In vivo microscopy of tumor cells in subdermal tissue layers (up to 160 μm showed a strong Cy5.5 dequenching effect in GFP-negative cells. This observation was corroborated by flow cytometry, sorting, and reverse transcription polymerase chain reaction analysis of tumor-isolated cells. Both GFP-positive (81% total and GFP-negative (19% total populations contained Cy5.5-positive cells. The GFP-negative cells were confirmed to be host mouse cells by the absence of rat cathepsin mRNA signal. The subfraction of GFPnegative cells (2.5-3.0% had seven times higher NIRF intensity than the majority of GFP-positive or GFPnegative cells (372 and 55 AU, respectively. Highly NIRF-positive, FP-negative cells were CD45-and MAC3-positive. Our results indicate that: 1 intracellular proteolysis can be imaged in vivo at the cellular level using cathepsin-sensitive probes; 2 tumor-recruited cells of hematopoetic origin participate most actively in uptake and degradation of long-circulating macromolecular probes.

  16. Determination of safranine T in food samples by CTAB sensitised fluorescence quenching method of the derivatives of calix[4]arene.

    Science.gov (United States)

    Wang, Wenjun; Zhu, Xiashi; Yan, Chaoguo

    2013-12-01

    In this paper, the interaction of safranine T (ST) and calix[4]arene (4,10,16,22-tetramethoxylresorcinarene carboxylic acid derivatives (TRCA)) was investigated with fluorescence spectroscopy. The results was shown that the fluorescence intensity of TRCA could be quenched by ST, and the fluorescence quenching (ΔF=FTRCA-FST-TRCA) was sensitised in cetyltrimethyl ammonium bromide (CTAB). Under the optimal conditions, the linear range of calibration curve for the determination of ST was 0.10-4.00 μg/mL. The detection limit and RSD was 0.034 μg/mL, 2.30% (n=3). The quantum yield (Yu) of ST was approximately 2.0 times higher in the presence of CTAB than that in the absence of CTAB. The method has been applied for the determination of ST in food samples with satisfactory results.

  17. Complexation of serum albumins and triton X-100: Quenching of tryptophan fluorescence and analysis of the rotational diffusion of complexes

    Science.gov (United States)

    Vlasova, I. M.; Vlasov, A. A.; Saletskii, A. M.

    2016-07-01

    The polarized and nonpolarized fluorescence of bovine serum albumin and human serum albumin in Triton X-100 solutions is studied at different pH values. Analysis of the constants of fluorescence quenching for BSA and HSA after adding Triton X-100 and the hydrodynamic radii of BSA/HSA-detergent complexes show that the most effective complexation between both serum albumins and Triton X-100 occurs at pH 5.0, which lies near the isoelectric points of the proteins. Complexation between albumin and Triton X-100 affects the fluorescence of the Trp-214 residing in the hydrophobic pockets of both BSA and HSA.

  18. Fluorescence-quenching of a liposomal-encapsulated near-infrared fluorophore as a tool for in vivo optical imaging.

    Science.gov (United States)

    Tansi, Felista L; Rüger, Ronny; Rabenhold, Markus; Steiniger, Frank; Fahr, Alfred; Hilger, Ingrid

    2015-01-05

    Optical imaging offers a wide range of diagnostic modalities and has attracted a lot of interest as a tool for biomedical imaging. Despite the enormous number of imaging techniques currently available and the progress in instrumentation, there is still a need for highly sensitive probes that are suitable for in vivo imaging. One typical problem of available preclinical fluorescent probes is their rapid clearance in vivo, which reduces their imaging sensitivity. To circumvent rapid clearance, increase number of dye molecules at the target site, and thereby reduce background autofluorescence, encapsulation of the near-infrared fluorescent dye, DY-676-COOH in liposomes and verification of its potential for in vivo imaging of inflammation was done. DY-676 is known for its ability to self-quench at high concentrations. We first determined the concentration suitable for self-quenching, and then encapsulated this quenching concentration into the aqueous interior of PEGylated liposomes. To substantiate the quenching and activation potential of the liposomes we use a harsh freezing method which leads to damage of liposomal membranes without affecting the encapsulated dye. The liposomes characterized by a high level of fluorescence quenching were termed Lip-Q. We show by experiments with different cell lines that uptake of Lip-Q is predominantly by phagocytosis which in turn enabled the characterization of its potential as a tool for in vivo imaging of inflammation in mice models. Furthermore, we use a zymosan-induced edema model in mice to substantiate the potential of Lip-Q in optical imaging of inflammation in vivo. Considering possible uptake due to inflammation-induced enhanced permeability and retention (EPR) effect, an always-on liposome formulation with low, non-quenched concentration of DY-676-COOH (termed Lip-dQ) and the free DY-676-COOH were compared with Lip-Q in animal trials.

  19. Fluorescence-quenching of a Liposomal-encapsulated Near-infrared Fluorophore as a Tool for In Vivo Optical Imaging

    Science.gov (United States)

    Rabenhold, Markus; Steiniger, Frank; Fahr, Alfred; Hilger, Ingrid

    2015-01-01

    Optical imaging offers a wide range of diagnostic modalities and has attracted a lot of interest as a tool for biomedical imaging. Despite the enormous number of imaging techniques currently available and the progress in instrumentation, there is still a need for highly sensitive probes that are suitable for in vivo imaging. One typical problem of available preclinical fluorescent probes is their rapid clearance in vivo, which reduces their imaging sensitivity. To circumvent rapid clearance, increase number of dye molecules at the target site, and thereby reduce background autofluorescence, encapsulation of the near-infrared fluorescent dye, DY-676-COOH in liposomes and verification of its potential for in vivo imaging of inflammation was done. DY-676 is known for its ability to self-quench at high concentrations. We first determined the concentration suitable for self-quenching, and then encapsulated this quenching concentration into the aqueous interior of PEGylated liposomes. To substantiate the quenching and activation potential of the liposomes we use a harsh freezing method which leads to damage of liposomal membranes without affecting the encapsulated dye. The liposomes characterized by a high level of fluorescence quenching were termed Lip-Q. We show by experiments with different cell lines that uptake of Lip-Q is predominantly by phagocytosis which in turn enabled the characterization of its potential as a tool for in vivo imaging of inflammation in mice models. Furthermore, we use a zymosan-induced edema model in mice to substantiate the potential of Lip-Q in optical imaging of inflammation in vivo. Considering possible uptake due to inflammation-induced enhanced permeability and retention (EPR) effect, an always-on liposome formulation with low, non-quenched concentration of DY-676-COOH (termed Lip-dQ) and the free DY-676-COOH were compared with Lip-Q in animal trials. PMID:25591069

  20. Fluorescence quenching studies of γ-butyrolactone binding protein (CprB) from Streptomyces coelicolor A3(2).

    Science.gov (United States)

    Biswas, Anwesha; Swarnkar, Ravi K; Hussain, Bhukya; Sahoo, Suraj K; Pradeepkumar, P I; Patwari, G Naresh; Anand, Ruchi

    2014-08-28

    Quorum sensing is a cell density dependent phenomenon that utilizes small molecule inducers like γ-butyrolactones (GBLs) and their receptor proteins for adaptation to the environment. The cognate GBLs that bind to several of this GBL receptor family of proteins remain elusive. Here, using CprB protein from Streptomyces coelicolor A3(2) as a model system, we devise a method suited for ligand screening that would be applicable to the entire family of GBL receptors. Docking studies were performed to confirm the identity of the ligand binding pocket, and it was ascertained that the common γ-butyrolactone moiety interacts with the conserved tryptophan residue (W127) residing in the ligand binding pocket. The presence of W127 in the cavity was exploited to monitor its fluorescence quenching on the addition of two chemically synthesized GBLs. Analysis of the data with both the native and W185L mutant versions of the protein confirmed that the compounds used as quenchers reside in the ligand binding pocket. Furthermore, fluorescence lifetime and potassium iodide (KI) quenching studies established that the quenching is static in nature and that the tryptophan residue is buried and inaccessible to surface quenchers. Additionally, a combination of concentration dependent fluorescence quenching and dynamic light scattering experiments revealed that the binding properties of the protein are concentration dependent and it was concluded that the most efficient binding of the ligand is evoked by working at the lowest concentration of protein, providing a sufficient signal, where the aggregation effects are negligible.

  1. Quenching of coumarin emission by CdSe and CdSe/ZnS quantum dots: Implications for fluorescence reporting

    Energy Technology Data Exchange (ETDEWEB)

    Baride, Aravind [Department of Chemistry, University of South Dakota, Vermillion, SD 57069 (United States); Engebretson, Daniel [Biomedical Engineering, University of South Dakota, Vermillion, SD 57069 (United States); Berry, Mary T. [Department of Chemistry, University of South Dakota, Vermillion, SD 57069 (United States); Stanley May, P., E-mail: smay@usd.edu [Department of Chemistry, University of South Dakota, Vermillion, SD 57069 (United States)

    2013-09-15

    The photoinduced release of highly fluorescent 7-diethylamino coumarin (7DEAC) from CdSe quantum dots (QD) modified with a thiocinnamate ligand (11-mercapto undecyl-E-3-(4-(N,N-diethylamino)-2-hydroxy phenyl) propenoate, [4DEATC]) has been previously described. Coumarin fluorescence was used to ‘report’ the photochemical reaction. The current study quantifies the quenching effect of the QDs on the coumarin emission in this system. A systematic study is presented on the quenching of 7DEAC by CdSe and CdSe/ZnS quantum dots capped with 2-[2-(2-methoxyethoxy)ethoxy] ethanethiol (PEG-thiol). A new method for the functionalization of CdSe and CdSe/ZnS QDs with PEG-thiol was developed, which does not require isolation of the as-synthesized QDs. Stern–Volmer analysis was applied to quantify the effect of the PEG-CdSe and PEG-CdSe/ZnS on 7DEAC emission. The Stern–Volmer constant, K{sub SV}, was shown to be inversely proportional to temperature for quenching by PEG-CdSe, and the fluorescence lifetime of 7DEAC was shown to be independent of PEG-CdSe concentration. Room-temperature K{sub SV} values were similar for the PEG-CdSe and PEG-CdSe/ZnS quenchers. The large magnitude of K{sub SV}, the temperature dependence of K{sub SV}, the lifetime data, and the similarity of K{sub SV} values for the core and core–shell QD quenchers are all consistent with a static quenching mechanism. Assuming a static quenching mechanism, the temperature dependence of the coumarin-QD binding constant, K{sub b}, was used to estimate the ΔH and ΔS for the binding process. -- Highlights: • Quenching of a coumarin derivative by CdSe and CdSe/ZnS quantum dots is demonstrated • Stern–Volmer analysis is performed as a function of temperature • Fluorescence lifetime analysis was used to support Stern–Volmer analysis • Data overwhelmingly support quenching via a Static Mechanism • Quenching of coumarin by quantum dots is significant and must be considered in any release and report

  2. Position-specific incorporation of fluorescent non-natural amino acids into maltose-binding protein for detection of ligand binding by FRET and fluorescence quenching.

    Science.gov (United States)

    Iijima, Issei; Hohsaka, Takahiro

    2009-04-17

    Position-specific incorporation of fluorescent groups is a useful method for analysis of the functions and structures of proteins. We have developed a method for the incorporation of visible-wavelength-fluorescent non-natural amino acids into proteins in a cell-free translation system. Using this technique, we introduced one or two BODIPY-linked amino acids into maltose-binding protein (MBP) to obtain MBP derivatives showing ligand-dependent changes in fluorescence intensity or intensity ratio. BODIPY-FL-aminophenylalanine was incorporated in place of 15 tyrosines, as well as the N-terminal Lys1, and the C-terminal Lys370 of MBP. Fluorescence measurements revealed that MBP containing a BODIPY-FL moiety in place of Tyr210 showed a 13-fold increase in fluorescence upon binding of maltose. Tryptophan-to-phenylalanine substitutions suggest that the increase in fluorescence was the result of a decrease in the quenching of BODIPY-FL by tryptophan located around the binding site. MBP containing a BODIPY-558 moiety also showed a maltose-dependent increase in fluorescence. BODIPY-FL was then additionally incorporated in place of Lys1 of the BODIPY-558-containing MBP as a response to the amber codon. Fluorescence measurements with excitation of BODIPY-FL showed a large change in fluorescence intensity ratio (0.13 to 1.25) upon binding of maltose; this change can be attributed to fluorescence resonance energy transfer (FRET) and maltose-dependent quenching of BODIPY-558. These results demonstrate the usefulness of the position-specific incorporation of fluorescent amino acids in the fluorescence-based detection of protein functions.

  3. A fast and environmental friendly analytical procedure for determination of melamine in milk exploiting fluorescence quenching.

    Science.gov (United States)

    Nascimento, Carina F; Rocha, Diogo L; Rocha, Fábio R P

    2015-02-15

    An environmental friendly procedure was developed for fast melamine determination as an adulterant of protein content in milk. Triton X-114 was used for sample clean-up and as a fluorophore, whose fluorescence was quenched by the analyte. A linear response was observed from 1.0 to 6.0mgL(-1) melamine, described by the Stern-Volmer equation I°/I=(0.999±0.002)+(0.0165±0.004) CMEL (r=0.999). The detection limit was estimated at 0.8mgL(-1) (95% confidence level), which allows detecting as low as 320μg melamine in 100g of milk. Coefficients of variation (n=8) were estimated at 0.4% and 1.4% with and without melamine, respectively. Recoveries to melamine spiked to milk samples from 95% to 101% and similar slopes of calibration graphs obtained with and without milk indicated the absence of matrix effects. Results for different milk samples agreed with those obtained by high performance liquid chromatography at the 95% confidence level.

  4. Interactions between polyphenols in thinned young apples and porcine pancreatic α-amylase: Inhibition, detailed kinetics and fluorescence quenching.

    Science.gov (United States)

    Sun, Lijun; Chen, Weiqi; Meng, Yonghong; Yang, Xingbin; Yuan, Li; Guo, Yurong

    2016-10-01

    Young apple polyphenols (YAP) and nine types of phenolic compounds were investigated regarding the inhibitory activity against porcine pancreatic α-amylase (PPA) in vitro. Tannic acid, chlorogenic acid and caffeic acid in YAP showed relatively high inhibition with the IC50 values of 0.30, 1.96 and 3.69mg/mL, respectively. A detailed kinetics of inhibition study revealed that YAP and tannic acid were competitive inhibitors of PPA, whereas chlorogenic acid and caffeic acid were mixed inhibitors, exhibiting both competitive and uncompetitive characteristics. The fluorescence of PPA could be significantly quenched by YAP and the three polyphenols, and their quenching constants were determined. The results showed that for the polyphenols investigated, the order of the apparent static quenching constants (KFQ) was in agreement with that of the reciprocal competitive inhibition constants (1/Kic) (tannic acid>chlorogenic acid>caffeic acid>epicatechin); both of the parameters were contrary to the order of the IC50 values. Thus, combining detailed kinetics and fluorescence quenching studies can be applied to characterise the interactions between polyphenols in young apples and α-amylase.

  5. Capped Fluorescent Carbon Dots for Detection of Hemin: Role of Number of –OH Groups of Capping Agent in Fluorescence Quenching

    Directory of Open Access Journals (Sweden)

    Upama Baruah

    2013-01-01

    Full Text Available We have successfully demonstrated the use of capped carbon dot systems, namely, CDs/β-cd, CDs/LMH, and CDs/Suc, as fluorescent sensors for the detection of hemin. The capped carbon dot systems showed quenching of PL intensity in the presence of hemin. The minimum detection limit was determined to be ~1 μM. The PL response with free Fe(II and Fe(III was also studied. It was observed that PL quenching of capped carbon dot systems in the presence of hemin is dependent on the number of –OH groups in the capping agent. The order of quenching towards hemin was determined to be CDs/β-cd > CDs/LMH = CDs/Suc > CDs. A possible mechanism to account for the observation is also discussed in the paper.

  6. Capped Fluorescent Carbon Dots for Detection of Hemin: Role of Number of –OH Groups of Capping Agent in Fluorescence Quenching

    Science.gov (United States)

    Baruah, Upama; Gogoi, Neelam; Chowdhury, Devasish

    2013-01-01

    We have successfully demonstrated the use of capped carbon dot systems, namely, CDs/β-cd, CDs/LMH, and CDs/Suc, as fluorescent sensors for the detection of hemin. The capped carbon dot systems showed quenching of PL intensity in the presence of hemin. The minimum detection limit was determined to be ~1 μM. The PL response with free Fe(II) and Fe(III) was also studied. It was observed that PL quenching of capped carbon dot systems in the presence of hemin is dependent on the number of –OH groups in the capping agent. The order of quenching towards hemin was determined to be CDs/β-cd > CDs/LMH = CDs/Suc > CDs. A possible mechanism to account for the observation is also discussed in the paper. PMID:24453870

  7. A simple fluorescence quenching method for berberine determination using water-soluble CdTe quantum dots as probes

    Science.gov (United States)

    Cao, Ming; Liu, Meigui; Cao, Chun; Xia, Yunsheng; Bao, Linjun; Jin, Yingqiong; Yang, Song; Zhu, Changqing

    2010-03-01

    A novel method for the determination of berberine has been developed based on quenching of the fluorescence of thioglycolic acid-capped CdTe quantum dots (TGA-CdTe QDs) by berberine in aqueous solutions. Under optimum conditions, the relative fluorescence intensity was linearly proportional to the concentration of berberine between 2.5 × 10 -8 and 8.0 × 10 -6 mol L -1 with a detection limit of 6.0 × 10 -9 mol L -1. The method has been applied to the determination of berberine in real samples, and satisfactory results were obtained. The mechanism of the proposed reaction was also discussed.

  8. Characterizing the interaction between uranyl ion and fulvic acid using regional integration analysis (RIA) and fluorescence quenching.

    Science.gov (United States)

    Zhu, Bingqi; Ryan, David K

    2016-03-01

    The development of chemometric methods has substantially improved the quantitative usefulness of the fluorescence excitation-emission matrix (EEM) in the analysis of dissolved organic matter (DOM). In this study, Regional Integration Analysis (RIA) was used to quantitatively interpret EEMs and assess fluorescence quenching behavior in order to study the binding between uranyl ion and fulvic acid. Three fulvic acids including soil fulvic acid (SFA), Oyster River fulvic acid (ORFA) and Suwannee River fulvic acid (SRFA) were used and investigated by the spectroscopic techniques. The EEM spectra obtained were divided into five regions according to fluorescence structural features and two distinct peaks were observed in region III and region V. Fluorescence quenching analysis was conducted for these two regions with the stability constants, ligand concentrations and residual fluorescence values calculated using the Ryan-Weber model. Results indicated a relatively strong binding ability between uranyl ion and fulvic acid samples at low pH (log K value varies from 4.11 to 4.67 at pH 3.50). Fluorophores in region III showed a higher binding ability with fewer binding sites than in region V. Stability constants followed the order, SFA > ORFA > SRFA, while ligand concentrations followed the reverse order, SRFA > ORFA > SFA. A comparison between RIA and Parallel Factor Analysis (PARAFAC) data treatment methods was also performed and good agreement between these two methods (less than 4% difference in log K values) demonstrates the reliability of the RIA method in this study.

  9. Fluorescence enhancement and quenching of Eu(TTFA){sub 3} by Ag nanoparticles at different excitations

    Energy Technology Data Exchange (ETDEWEB)

    Wang, Qingru, E-mail: wangqingru@lcu.edu.cn [School of Physical Science and Information Technology, LiaochengUniversity, Liaocheng 252059 (China); Shandong Provinical Key Laboratory of Optical Communication Science and Technology, Liaocheng 252059 (China); Shi, Qiang; Li, Shuhong; Wang, Wenjun; Zheng, Shiling [School of Physical Science and Information Technology, LiaochengUniversity, Liaocheng 252059 (China); Shandong Provinical Key Laboratory of Optical Communication Science and Technology, Liaocheng 252059 (China)

    2015-01-15

    The luminescence properties of Eu(TTFA){sub 3} complex in presence of silver nanoparticles were investigated at three excitation wavelengths of 350 nm, 383 nm and 463 nm, respectively. Luminescence quenching and enhancement were both observed at three different excitation and emission wavelengths. Luminescence at 612 nm, 578 nm, 590 nm and 650 nm were enhanced at excitation wavelength of 350 nm, and quenched at excitation wavelength of 383 nm. The enhancement factor reached to 1.6 and the quench factor was about 0.65. For 463 nm excitation, the luminescence at 612 nm was quenched, and the quench factor reached to 0.85. Luminescence at other three emission wavelengths (578 nm, 590 nm, and 650 nm) was enhanced, with the greatest enhancement factor of ∼5. - Highlights: • The luminescence enhancement and quenching were both obtained by using the Ag nanoparticles. • The luminescence enhancement and quenching highly depends on the excitation and emission wavelengths. • The enhancement factor of luminescence also has a great relationship with the intrinsic quantum yield.

  10. Photophysical studies on the interaction of amides with Bovine Serum Albumin (BSA) in aqueous solution: Fluorescence quenching and protein unfolding

    Energy Technology Data Exchange (ETDEWEB)

    Kumaran, R., E-mail: kumaranwau@rediffmail.com [Department of Chemistry, Dwaraka Doss Goverdhan Doss Vaishnav College, Arumbakkam, Chennai 600106 (India); Ramamurthy, P. [National Centre for Ultrafast Processes, University of Madras, Sekhizar Campus, Taramani, Chennai 600113 (India)

    2014-04-15

    Addition. of amides containing a H-CO(NH{sub 2}) or CH{sub 3}-CO(NH{sub 2}) framework to BSA results in a fluorescence quenching. On the contrary, fluorescence enhancement with a shift in the emission maximum towards the blue region is observed on the addition of dimethylformamide (DMF) (H-CON(CH{sub 3}){sub 2}). Fluorescence quenching accompanied initially with a shift towards the blue region and a subsequent red shift in the emission maximum of BSA is observed on the addition of formamide (H-CO(NH{sub 2})), whereas a shift in the emission maximum only towards the red region results on the addition of acetamide (CH{sub 3}-CONH{sub 2}). Steady state emission spectral studies reveal that amides that possess a free NH{sub 2} and N(CH{sub 3}){sub 2} moiety result in fluorescence quenching and enhancement of BSA respectively. The 3D contour spectral studies of BSA with formamide exhibit a shift in the emission towards the red region accompanied with fluorescence quenching, which indicates that the tryptophan residues of the BSA are exposed to a more polar environment. Circular Dichroism (CD) studies of BSA with amides resulted in a gradual decrease in the α-helical content of BSA at 208 nm, which confirms that there is a conformational change in the native structure of BSA. Time-resolved fluorescence studies illustrate that the extent of buried trytophan moieties exposed to the aqueous phase on the addition of amides follows the order DMFfluorescence methods. -- Highlights:

  11. THE SYNTHESIS OF Ag-POLYPYRROLE NANOCOMPOSITE COATED LATEX PARTICLES AND THEIR APPLICATION AS A FLUORESCENT QUENCHING AGENT

    Institute of Scientific and Technical Information of China (English)

    Jiang-ru Zhang; Teng Qiu; Hong-fu Yuan; Xiao-yu Li

    2013-01-01

    Submicron-sized Ag-polypyrrole/poly(styrene-co-methacrylic acid) (Ag-PPy/P(St-co-MAA)) composite particles were fabricated via a redox reaction between pyrrole and AgNO3 in the presence of P(St-co-MAA) soap-free latex.The products are characterized by transmission electron microscopy (TEM),electron diffraction spectra (EDS),Raman spectra,thermogravimetric analysis (TGA) and scanning electron microscopy (SEM).The results showed that Ag-PPy nanocomposites were in situ deposited onto the surface of P(St-co-MAA) latex particles tailored by carboxylic-acid groups.The nanocomposites of Ag-PPy distributed on the surface of polymer particles transformed from discretely dots to continuously coating as the reaction temperature increased from 15℃ to 60℃.Strawberry-like composite particles were obtained at the reaction temperature of 60℃.The TGA characterization confirmed that the Ag-PPy nanocomposites loading onto the P(St-co-MAA) particles were systematically controlled over a range of 6 wt%-42 wt% by changing the reaction temperatures.The fluorescence quenching effect of the Ag-PPy/P(St-co-MAA) composite particles was explored on Rhodamine B as a model molecule with the Stern-V(o)1mer quenching constant Ksv of 5.9 × 104 (g/mL)-1.It is suggested that the fluorescence quenching effect is caused by the resonance energy transfer mechanism.

  12. Enzyme-catalyzed Michael addition for the synthesis of warfarin and its determination via fluorescence quenching of L-tryptophan

    Science.gov (United States)

    Yuan, Yusheng; Yang, Liu; Liu, Shaopu; Yang, Jidong; Zhang, Hui; Yan, Jingjing; Hu, Xiaoli

    2017-04-01

    A sensitive fluorescence sensor for warfarin was proposed via quenching the fluorescence of L-tryptophan due to the interaction between warfarin and L-tryptophan. Warfarin, as one of the most effective anticoagulants, was designed and synthesized via lipase from porcine pancreas (PPL) as a biocatalyst to catalyze the Michael addition of 4-hydroxycoumarin to α, β-unsaturated enones in organic medium in the presence of water. Furthermore, the spectrofluorometry was used to detect the concentration of warfarin with a linear range and detection limit (3σ/k) of 0.04-12.0 μmol L- 1 (R2 = 0.994) and 0.01 μmol L- 1, respectively. Herein, this was the first application of bio-catalytic synthesis and fluorescence for the determination of warfarin. The proposed method was applied to determine warfarin of the drug in tablets with satisfactory results.

  13. Fluorescence quenching study of 2,6-bis(5-(4-methylphenyl)-1-H-pyrazol-3-yl)pyridine with metal ions.

    Science.gov (United States)

    Liu, Hua; Li, Fang-Xiong; Pi, Yan; Wang, Dun-Jia; Hu, Yan-Jun; Zheng, Jing

    2015-06-15

    A novel bispyrazole derivative 2,6-bis(5-(4-methylphenyl)-1-H-pyrazol-3-yl)pyridine was synthesized and its structure was confirmed by (1)H NMR, FTIR, MS techniques and elemental analysis. The binding interactions of BMPP with Cd(2+), Co(2+), Pb(2+) and Cu(2+) ions were investigated in MeOH-H2O solution by fluorescence quenching technique at two temperatures (25 and 35°C). Their quenching constants KSV, binding constants K, binding sites n and thermodynamic parameters (ΔH, ΔG and ΔS) were determined. The results indicated that the metal ions quenched the intrinsic fluorescence of the bispyrazole by forming the bispyrazole-metal complexes and their quenching process was a static quenching mechanism. In addition, the process of interaction was spontaneous and mainly ΔS-driven.

  14. Combination of DNA ligase reaction and gold nanoparticle-quenched fluorescent oligonucleotides: a simple and efficient approach for fluorescent assaying of single-nucleotide polymorphisms.

    Science.gov (United States)

    Wang, Hao; Li, Jishan; Wang, Yongxiang; Jin, Jiangyu; Yang, Ronghua; Wang, Kemin; Tan, Weihong

    2010-09-15

    A new fluorescent sensing approach for detection of single-nucleotide polymorphisms (SNPs) is proposed based on the ligase reaction and gold nanoparticle (AuNPs)-quenched fluorescent oligonucleotides. The design exploits the strong fluorescence quenching of AuNPs for organic dyes and the difference in noncovalent interactions of the nanoparticles with single-stranded DNA (ssDNA) and double-stranded DNA (dsDNA), where ssDNA can be adsorbed onto the surface of AuNPs while dsDNA cannot be. In the assay, two half primer DNA probes, one being labeled with a dye and the other being phosphorylated, were first incubated with a target DNA template. In the presence of DNA ligase, the two captured ssDNAs are linked for the perfectly matched DNA target to form a stable duplex, but the duplex could not be formed by the single-base mismatched DNA template. After addition of AuNPs, the fluorescence of dye-tagged DNA probe will be efficiently quenched unless the perfectly matched DNA target is present. To demonstrate the feasibility of this design, the performance of SNP detection using two different DNA ligases, T4 DNA ligase and Escherichia coli DNA ligase, were investigated. In the case of T4 DNA ligase, the signal enhancement of the dye-tagged DNA for perfectly matched DNA target is 4.6-fold higher than that for the single-base mismatched DNA. While in the presence of E. coli DNA ligase, the value raises to be 30.2, suggesting excellent capability for SNP discrimination.

  15. Fluorescence quenching of boronic acid derivatives by aniline in alcohols – A Negative deviation from Stern–Volmer equation

    Energy Technology Data Exchange (ETDEWEB)

    Geethanjali, H.S. [Department of Physics, Bangalore Institute of Technology, Bangalore 560004, Karnataka (India); Nagaraja, D., E-mail: nagarajdd86@gmail.com [Department of Physics, Bangalore Institute of Technology, Bangalore 560004, Karnataka (India); Melavanki, R.M., E-mail: melavanki73@gmail.com [Department of Physics, M S Ramaiah Institute of Technology, Bangalore 560054, Karnataka (India); Kusanur, R.A. [Department of Chemistry, R.V. College of Engineering, Bangalore 560059, Karnataka (India)

    2015-11-15

    The fluorescence quenching study of two boronic acid derivatives 5-chloro-2-methoxy phenyl boronic acid (5CMPBA) and 4-fluoro-2-methoxyphenyl boronic acid (4FMPBA) in alcohols of varying viscosities is carried out at room temperature by steady state fluorescence measurements. Aniline is used as quencher. The negative deviation in the Stern–Volmer (S–V) plots has been observed for both the molecules with moderate quencher concentration. The downward curvature in the S–V plot is interpreted in terms of existence of different conformers of the solutes in the ground state. The formation of intermolecular and intramolecular hydrogen bonding in alcohol environments is taken to be responsible for the conformational changes in the ground state of the solutes. The modified Stern–Volmer equation or Lehrer equation is used to calculate Stern–Volmer constant (K{sub SV}) and it is found to be above 100 for most of the solvents used. - Highlights: • Fluorescence quenching of two boronic acid derivatives by aniline in alcohols is carried out at room temperature. • A negative deviation is observed in Stern-Volmer(S-V) plots and it is explained using S-V kinetics and Lehrer equation. • The negative deviation observed in the S–V plot is explained in terms of intramolecular and intermolecular hydrogen bond formations.

  16. Employing the fluorescence anisotropy and quenching kinetics of tryptophan to hunt for residual structures in denatured proteins

    Indian Academy of Sciences (India)

    Satish Kumar; Rajaram Swaminathan

    2007-03-01

    Residual structures in denatured proteins have acquired importance in recent years owing to their role as protein-folding initiation sites. Locating these structures in proteins has proved quite formidable, requiring techniques like NMR. Here in this report, we take advantage of the ubiquitous presence of tryptophan residues in residual structures to hunt for their presence using steady-state fluorescence spectroscopy. The surface accessibility and rotational dynamics of tryptophan in putative residual structures among ten different proteins, namely glucagon, melittin, subtilisin carlsberg, myelin basic protein, ribonuclease T1, human serum albumin, barstar mutant, bovine serum albumin, lysozyme and Trp-Met-Asp-Phe-NH2 peptide, was studied using steady state fluorescence quenching and anisotropy, respectively. Five proteins, namely ribonuclease T1, bovine serum albumin, melittin, barstar and hen egg white lysozyme appear likely to possess tryptophan(s) in hydrophobic clusters based on their reduced bimolecular quenching rates and higher steady-state anisotropy in proportion to their chain length. We also show that the fluorescence emission maximum of tryptophan is insensitive to the presence of residual structures.

  17. Homogeneous DNA Detection Based on Fluorescence Quenching by Nanoparticles in Single-step Format :Target-Induced Configuration Transform

    Institute of Scientific and Technical Information of China (English)

    ZHANG,Songbai; WU,Zaisheng; XIE,Ming; SHEN,Guoli; YU,Ruqin

    2009-01-01

    A new strategy for homogeneous detection of DNA hybridization in single-step format was developed based on fluorescence quenching by gold nanoparticles.The gold nanoparticle is functionalized with 5'-thiolated 48-base oligonucleotide(probe sequence),whose 3'-terminus is labeled with fluorescein(FAM),a negatively charged fluo-rescencc dye.The oligonucleotide adopts all extended configuration due to the electrostatic repulsion between nega-tively charged gold nanoparticle and the FAM-attached probe sequence.After addition of the complementary target sequence,specific DNA hybridization induces a conformation change of the probe from an extended stmcture to an arch.1ike configuration,which brings the fluorophore and the gold nanoparticle in close proximity.The fluorescence is efficiently quenched by gold nanoparticles.The fluorescence quenching efficiency is related to the target concen.tration,which allows the quantitative detection for target sequence in a sample.A linear detection range from 1.6 to 209.4 nmoI/L Was obtained under the optimized experimental conditions with a detection limit of 0.1 nmol,L.In the assay system,the gold nanoparticles act as both nanoscaffolds and nanoquenchers.Furthermore,the proposed strategy.in which only two DNA sequences arc involved,is not only different from the traditional molecular bea-cons or reverse molecular beacons but also different from the commonly used sandwich hybridization methods.In addition,the DNA hybridization detection was achieved in homogenous solution in a single-step format,which al-lows real.time detection and quantification with other advantages such as easy operation and elimination of washing steps.

  18. 酪氨酸猝灭Eosin Y的荧光%Fluorescence Quenching of Eosin Y by Tyrosine

    Institute of Scientific and Technical Information of China (English)

    王经东; 李爽; 吕荣; 于安池

    2015-01-01

    氨基酸残基对探针分子的荧光猝灭行为可以为生物大分子的结构及构象动力学研究提供重要的信息。本文运用飞秒瞬态吸收光谱和时间相关单光子计数实验系统研究了在水(H2O)和氘代水(D2O)溶液中乙酰基取代酪氨酸(AcTyr)对Eosin Y的超快荧光猝灭动力学过程。发现导致AcTyr对Eosin Y荧光猝灭的主要原因是由于它们之间形成了短寿命的基态复合物。我们还发现Eosin Y与AcTyr形成的基态复合物的激发态寿命具有明显的动力学同位素效应,表明AcTyr对Eosin Y的荧光猝灭是通过质子耦合电子转移过程发生的。%Quenching of a fluorescent probe by amino acid residues can provide valuable information about the structural and conformational dynamics of a biopolymer. Herein, we systematically investigated the ultrafast fluorescence quenching dynamics of Eosin Y in the presence ofN-acetyl-tyrosine (AcTyr) in H2O and D2O solutions using both femtosecond transient absorption and time-correlated single-photon counting experiments. We found that the quenching of the fluorescence of Eosin Y by AcTyr in aqueous solution is mainly because of the formation of a ground-state complex between Eosin Y and AcTyr. We also found that the lifetime of the ground-state complex formed between Eosin Y and AcTyr showed a clear kinetic isotope effect, indicating that the quenching of the fluorescence of Eosin Y by AcTyr in aqueous solution isvia a proton-coupled electron transfer process.

  19. Label-Free MicroRNA Detection Based on Fluorescence Quenching of Gold Nanoparticles with a Competitive Hybridization.

    Science.gov (United States)

    Wang, Wei; Kong, Tao; Zhang, Dong; Zhang, Jinan; Cheng, Guosheng

    2015-11-01

    MicroRNAs (miRNAs), critical biomarkers of acute and chronic diseases, play key regulatory roles in many biological processes. As a result, there is great demand for robust assay platforms to enable an accurate and efficient detection of low-level miRNAs in complex biological samples. In this work, a label-free and Au nanoparticles (NPs) quenching-based competition assay system was developed. In the designed system, Au NPs with diameter sizes of 10 and 20 nm displayed fluorescence quenching efficiencies of 84% and 82% for Cy3 dye on slide surface, whereas the quenching efficiency of commercial BHQ2 quencher was roughly 50%. Assay conditions were optimized for miRNA-205 detection. A limit of detection of 3.8 pM and a detection range covering from 3.8 pM to 10 nM were achieved. Furthermore, the proposed system was capable of specifically discriminating miRNAs with slight variations in their nucleotide sequence and was also qualified for assessing miRNA levels in human serum. Our strategy has the potential to provide new perspectives in profiling the pattern of miRNA expression and biomedical utilizations.

  20. Role of echinenone in fluorescence quenching in IsiA aggregates from cyanobacteria

    NARCIS (Netherlands)

    D'Haene, S.; Tsoukatos, K.; Lampoura, S.S.; Matthijs, H.C.P.; Dekker, J.P.; Allen, J.F.; Gantt, E.; Goldbeck, J.H.; Osmond, B.

    2008-01-01

    We compare the carotenoid composition and the quenching properties of IsiA aggregates obtained from a Synechocystis PCC 6803 psaFJ-null mutant and from a crtO-null mutant that is unable to synthesize echinenone. Pigment analysis indicates that isolated IsiA aggregates from the psaFJ-null mutant bind

  1. Kinetic analysis of the mechanism and specificity of protein-disulfide isomerase using fluorescence-quenched peptides

    DEFF Research Database (Denmark)

    Westphal, V; Spetzler, J C; Meldal, M

    1998-01-01

    Protein-disulfide isomerase (PDI) is an abundant folding catalyst in the endoplasmic reticulum of eukaryotic cells. PDI introduces disulfide bonds into newly synthesized proteins and catalyzes disulfide bond isomerizations. We have synthesized a library of disulfide-linked fluorescence......-quenched peptides, individually linked to resin beads, for two purposes: 1) to probe PDI specificity, and 2) to identify simple, sensitive peptide substrates of PDI. Using this library, beads that became rapidly fluorescent by reduction by human PDI were selected. Amino acid sequencing of the bead-linked peptides...... revealed substantial similarities. Several of the peptides were synthesized in solution, and a quantitative characterization of pre-steady state kinetics was carried out. Interestingly, a greater than 10-fold difference in affinity toward PDI was seen for various substrates of identical length. As opposed...

  2. Modelling chlorophyll fluorescence of kiwi fruit (Actinidia deliciosa).

    Science.gov (United States)

    Novo, Johanna Mendes; Iriel, Analia; Lagorio, M Gabriela

    2012-04-01

    Kiwi fruit displays chlorophyll fluorescence. A physical model was developed to reproduce the observed original fluorescence for the whole fruit, from the emission of the different parts of the kiwi fruit. The spectral distribution of fluorescence in each part of the fruit, was corrected to eliminate distortions due to light re-absorption and it was analyzed in relation to photosystem II-photosystem I ratio. Kiwi fruit also displays variable chlorophyll-fluorescence, similar to that observed from leaves. The maximum quantum efficiency of photosystem II photochemistry (F(v)/F(m)), the quantum efficiency of photosystem II (Φ(PSII)), and the photochemical and non-photochemical quenching coefficients (q(P) and q(NP) respectively) were determined and discussed in terms of the model developed. The study was extended by determining the photosynthetic parameters as a function of the storage time, at both 4 °C and room temperature for 25 days.

  3. Synthesis, spectral behaviour and photophysics of donor-acceptor kind of chalcones: Excited state intramolecular charge transfer and fluorescence quenching studies

    Science.gov (United States)

    Pannipara, Mehboobali; Asiri, Abdullah M.; Alamry, Khalid A.; Arshad, Muhammad N.; El-Daly, Samy A.

    2015-02-01

    The spectral and photophysical properties of two chalcones containing electron donating and accepting groups with intramolecular charge transfer characteristics were synthesized and characterized by 1H NMR, 13C NMR and X-ray crystallography. Both compounds show very strong solvent polarity dependent changes in their photophysical characteristics, namely, remarkable red shift in the emission spectra with increasing solvent polarity, large change in Stokes shift, significant reduction in the fluorescence quantum yield; indicating that the fluorescence states of these compounds are of intramolecular charge transfer (ICT) character. The solvent effect on the photophysical parameters such as singlet absorption, molar absorptivity, oscillator strength, dipole moment, fluorescence spectra, and fluorescence quantum yield of both compounds have been investigated comprehensively. For both dyes, Lippert-Mataga and Reichardt's correlations were used to estimate the difference between the excited and ground state dipole moments (Δμ). The interactions of dyes with colloidal silver nanoparticles (Ag NPs) were also studied in ethanol using steady state fluorescence quenching measurements. The fluorescence quenching data reveal that dynamic quenching and energy transfer play a major role in the fluorescence quenching of dyes by Ag NPs.

  4. Fast and single-step immunoassay based on fluorescence quenching within a square glass capillary immobilizing graphene oxide-antibody conjugate and fluorescently labelled antibody.

    Science.gov (United States)

    Shirai, Akihiro; Henares, Terence G; Sueyoshi, Kenji; Endo, Tatsuro; Hisamoto, Hideaki

    2016-05-23

    A single-step, easy-to-use, and fast capillary-type immunoassay device composed of a polyethylene glycol (PEG) coating containing two kinds of antibody-reagents, including an antibody-graphene oxide conjugate and fluorescently labelled antibody, was developed in this study. The working principle involved the spontaneous dissolution of the PEG coating, diffusion of reagents, and subsequent immunoreaction, triggered by the capillary action-mediated introduction of a sample solution. In a sample solution containing the target antigen, two types of antibody reagents form a sandwich-type antigen-antibody complex and fluorescence quenching takes place via fluorescence resonance energy transfer between the labelled fluorescent molecules and graphene oxide. Antigen concentration can be measured based on the decrease in fluorescence intensity. An antigen concentration-dependent response was obtained for the model target protein sample (human IgG, 0.2-10 μg mL(-1)). The present method can shorten the reaction time to within 1 min (approximately 40 s), while conventional methods using the same reagents require reaction times of approximately 20 min because of the large reaction scale. The proposed method is one of the fastest immunoassays ever reported. Finally, the present device was used to measure human IgG in diluted serum samples to demonstrate that this method can be used for fast medical diagnosis.

  5. Determination of berberine and the study of fluorescence quenching mechanism between berberine and enzyme-catalyzed product

    Science.gov (United States)

    Wang, Huaiyou; Zhang, Miao; Lv, Qingluan; Yue, Ningning; Gong, Bin

    2009-08-01

    A new method for determining berberine has been established based on the principle of fluorescence quenching. The calibration curve was found to be linear between F0/ F and the concentration of berberine with the range of 3.00-20.0 μg mL -1. The detection limit was 0.51 μg mL -1 and the relative standard derivative was 0.18%. Effects of pH, foreign ions and the optimization of variables on the determination of berberine have been examined. The mechanism of the fluorescence quenching has been discussed. The binding constant and the number of binding sites were 1.70 × 10 6 L mol -1 and 1.14, respectively. The data, Δ H = 42.71 kJ mol -1, Δ S = 264.3 J K -1 mol -1 and the mean value Δ G = -39.65 kJ mol -1 were estimated which showed that the reaction was spontaneous and endothermic. The main binding force was hydrophobic force because both Δ H and Δ S were positive.

  6. Probing the adverse temperature dependence in the static fluorescence quenching of BSA induced by a novel anticancer hydrazone.

    Science.gov (United States)

    Tong, Jin-Qiang; Tian, Fang-Fang; Li, Qing; Li, Li-Li; Xiang, Chen; Liu, Yi; Dai, Jie; Jiang, Feng-Lei

    2012-12-01

    A novel hydrazone, 2-hydroxy-N'-(3-hydroxybenzylidene) benzohydrazide (HHB), has been designed, synthesized and characterized. HHB was designed to be an analogue of 311 and PIH with potential anticancer activity, and the IC(50) towards HeLa cell was about 3.46 × 10(-5) mol(-1) L. The interactions of HHB with bovine serum albumin (BSA) had been investigated systematically by spectroscopy, electrochemistry, and molecular modeling under simulative physiological conditions. HHB bound BSA in the sub-domains IIA to form a ground-state complex, inducing the quenching of the intrinsic fluorescence emission, the change of absorption spectrum and the increase of electrical resistance of BSA. An adverse temperature dependence in the fluorescence quenching was detected and discussed to be a reasonable consequence of the big E(a) requirement to overcome the obstructive amino acid residues in the entrance to the binding site, which were closely related to the natural structure of BSA and the molecular shape of HHB. The impact of metal ions, including Fe(2+), Fe(3+), Cu(2+), Mg(2+), Zn(2+), Ca(2+) and Al(3+), towards the interactions of HHB and BSA has been investigated and they were found to affect the HHB-BSA interactions in a mild way.

  7. Proton equilibration in the chloroplast modulates multiphasic kinetics of nonphotochemical quenching of fluorescence in plants.

    Science.gov (United States)

    Joliot, Pierre A; Finazzi, Giovanni

    2010-07-13

    In plants, the major route for dissipating excess light is the nonphotochemical quenching of absorbed light (NPQ), which is associated with thylakoid lumen acidification. Our data offer an interpretation for the complex relationship between changes in luminal pH and the NPQ response. Upon steady-state illumination, fast NPQ relaxation in the dark reflects the equilibration between the electrochemical proton gradient established in the light and the cellular ATP/ADP+Pi ratio. This is followed by a slower phase, which reflects the decay of the proton motive force at equilibrium, due to gradual cellular ATP consumption. In transient conditions, a sustained lag appears in both quenching onset and relaxation, which is modulated by the size of the antenna complexes of photosystem II and by cyclic electron flow around photosystem I. We propose that this phenomenon reflects the signature of protonation of specific domains in the antenna and of slow H(+) diffusion in the different domains of the chloroplast.

  8. Simple and sensitive synchronous- fluorescence method for the determination of trace bisphenol S based on its inhibitory effect on the fluorescence quenching reaction of rhodamine B.

    Science.gov (United States)

    Cao, Gui-ping; Chen, Ting; Zhuang, Ya-feng

    2013-07-01

    An inhibitory kinetic fluorimetric method is reported for the determination of trace bisphenol S (BPS). The proposed method is based on the inhibitory effect of BPS on the fluorescence quenching of rhodamine B (RhB) caused by potassium bromate in a dilute phosphoric acid medium. Under the optimal conditions of the experiment, the detection limit for BPS was 0.021 mg/L, and the linear range of determination was from 0.035 mg/L to 0.750 mg/L. The relative standard deviations of 11 measurements for 0.20 mg/L and 0.40 mg/L BPS solutions were 2.74 % and 1.87 %, respectively. The method was successfully applied to the determination of bisphenol S derived from commercially available plastic film samples in hot water. A possible reaction mechanism of the inhibitory effect of BPS on the fluorescence quenching of RhB was proposed.

  9. Fluorescence quenching investigation on the interaction of glutathione-CdTe/CdS quantum dots with sanguinarine and its analytical application.

    Science.gov (United States)

    Shen, Yizhong; Liu, Shaopu; He, Youqiu

    2014-03-01

    Water-soluble glutathione (GSH)-capped core/shell CdTe/CdS quantum dots (QDs) were synthesized. In pH5.4 sodium phosphate buffer medium, the interaction between GSH-CdTe/CdS QDs and sanguinarine (SA) was investigated by spectroscopic methods, including fluorescence spectroscopy and ultraviolet-visible absorption spectroscopy. Addition of SA to GSH-CdTe/CdS QDs results in fluorescence quenching of GSH-CdTe/CdS QDs. Quenching intensity was in proportion to the concentration of SA in a certain range. Investigation of the quenching mechanism, proved that the fluorescence quenching of GSH-CdTe/CdS QDs by SA is a result of electron transfer. Based on the quenching of the fluorescence of GSH-CdTe/CdS QDs by SA, a novel, simple, rapid and specific method for SA determination was proposed. The detection limit for SA was 3.4 ng/mL and the quantitative determination range was 0.2-40.0 µg/mL with a correlation coefficient of 0.9988. The method has been applied to the determination of SA in synthetic samples and fresh urine samples of healthy human with satisfactory results.

  10. Liposomal encapsulation of a near-infrared fluorophore enhances fluorescence quenching and reliable whole body optical imaging upon activation in vivo.

    Science.gov (United States)

    Tansi, Felista L; Rüger, Ronny; Rabenhold, Markus; Steiniger, Frank; Fahr, Alfred; Kaiser, Werner A; Hilger, Ingrid

    2013-11-11

    In the past decade, there has been significant progress in the development of water soluble near-infrared fluorochromes for use in a wide range of imaging applications. Fluorochromes with high photo and thermal stability, sensitivity, adequate pharmacological properties and absorption/emission maxima within the near infrared window (650-900 nm) are highly desired for in vivo imaging, since biological tissues show very low absorption and auto-fluorescence at this spectrum window. Taking these properties into consideration, a myriad of promising near infrared fluorescent probes has been developed recently. However, a hallmark of most of these probes is a rapid clearance in vivo, which hampers their application. It is hypothesized that encapsulation of the near infrared fluorescent dye DY-676-COOH, which undergoes fluorescence quenching at high concentrations, in the aqueous interior of liposomes will result in protection and fluorescence quenching, which upon degradation by phagocytes in vivo will lead to fluorescence activation and enable imaging of inflammation. Liposomes prepared with high concentrations of DY-676-COOH reveal strong fluorescence quenching. It is demonstrated that the non-targeted PEGylated fluorescence-activatable liposomes are taken up predominantly by phagocytosis and degraded in lysosomes. Furthermore, in zymosan-induced edema models in mice, the liposomes are taken up by monocytes and macrophages which migrate to the sites of inflammation. Opposed to free DY-676-COOH, prolonged stability and retention of liposomal-DY-676-COOH is reflected in a significant increase in fluorescence intensity of edema. Thus, protected delivery and fluorescence quenching make the DY-676-COOH-loaded liposomes a highly promising contrast agent for in vivo optical imaging of inflammatory diseases.

  11. Effects of habitat light conditions on the excitation quenching pathways in desiccating Haberlea rhodopensis leaves: an Intelligent FluoroSensor study.

    Science.gov (United States)

    Solti, Ádám; Lenk, Sándor; Mihailova, Gergana; Mayer, Péter; Barócsi, Attila; Georgieva, Katya

    2014-01-05

    Resurrection plants can survive dehydration to air-dry state, thus they are excellent models of understanding drought and dehydration tolerance mechanisms. Haberlea rhodopensis, a chlorophyll-retaining resurrection plant, can survive desiccation to relative water content below 10%. Leaves, detached from plants of sun and shade habitats, were moderately (∼50%) dehydrated in darkness. During desiccation, chlorophyll a fluorescence was detected by the recently innovated wireless Intelligent FluoroSensor (IFS) chlorophyll fluorometer, working with three different detectors: a pulse-amplitude-modulated (PAM) broadband channel and two channels to measure non-modulated red and far-red fluorescence. No change in area-based chlorophyll content of leaves was observed. The maximal quantum efficiency of photosystem II decreased gradually in both shade and sun leaves. Shade leaves could not increase antennae-based quenching, thus inactivated photosystem II took part in quenching of excess irradiation. Sun leaves seemed to be pre-adapted to quench excess light as they established an intensive increase in antennae-based non-photochemical quenching parallel to desiccation. The higher far-red to red antennae-based quenching may sign light-harvesting complex reorganization. Thus, compared to PAM, IFS chlorophyll fluorometer has additional benefits including (i) parallel estimation of changes in the Chl content and (ii) prediction of underlying processes of excitation energy quenching.

  12. Comparing the heterogeneity of copper-binding characteristics for two different-sized soil humic acid fractions using fluorescence quenching combined with 2D-COS.

    Science.gov (United States)

    Hur, Jin; Lee, Bo-Mi

    2011-01-01

    Heterogeneous distributions of copper-binding characteristics were compared for two ultrafiltered size fractions of a soil HA using fluorescence quenching combined with two-dimensional correlation spectroscopy (2D-COS). The apparent shapes of the original synchronous fluorescence spectra and the extent of the fluorescence quenching upon the addition of copper were similar for the two fractions. The stability constants calculated at their highest peaks were not significantly different. However, the 2D-COS results revealed that the fluorescence quenching behaviors were strongly affected by the associated wavelengths and the fraction's size. The spectral change preferentially occurred in the wavelength order of 467 nm → 451 nm → 357 nm for the 1-10 K fraction and of 376 nm → 464 nm for the >100 K fraction. The extent of the binding affinities exactly followed the sequential orders interpreted from the 2D-COS, and they exhibited the distinctive ranges of the logarithmic values from 5.86 to 4.91 and from 6.48 to 5.95 for the 1-10 K and the >100 K fractions, respectively. Our studies demonstrated that fluorescence quenching combined with 2D-COS could be successfully utilized to give insight into the chemical heterogeneity associated with metal-binding sites within the relatively homogeneous HA size fractions.

  13. Photoluminescence of MoS2 quantum dots quenched by hydrogen peroxide: A fluorescent sensor for hydrogen peroxide

    Science.gov (United States)

    Gan, Zhixing; Gui, Qingfeng; Shan, Yun; Pan, Pengfei; Zhang, Ning; Zhang, Lifa

    2016-09-01

    By cutting MoS2 microcrystals to quantum dots (QDs) of sizes below 10 nm, the photoluminescence (PL) at ca. 450 nm can be detected easily due to the quantum confinement effects across the 2D planes. The PL is stable under continuous irradiation of UV light but gradually quenches when treated with an increasing concentration of hydrogen peroxide. Time-resolved PL and Raman spectra imply that H2O2 causes the partial oxidation of MoS2 QDs. First-principles calculations reveal that the MoS2 QDs with oxygen impurity are of indirect bandgap structures showing no notable PL. And absorption spectra verify that the PL of MoS2 QDs quenched by H2O2 is attributed to the oxidation. The integrated PL intensity and H2O2 concentration show an exponential relationship in the range of 2-20 μM, suggesting that MoS2 QDs are potential fluorescent probes for hydrogen peroxide sensing in a physiological environment.

  14. Preparation of fluorescence quenched libraries containing interchain disulphide bonds for studies of protein disulphide isomerases

    DEFF Research Database (Denmark)

    Spetzler, J C; Westphal, V; Winther, Jakob R.

    1998-01-01

    the chemistry required for the generation of a split-synthesis library, two substrates containing an interchain disulphide bond, a fluorescent probe and a quencher were synthesized. The library consists of a Cys residue flanked by randomized amino acid residues at both sides and the fluorescent Abz group...... at the amino terminal. All the 20 natural amino acids except Cys were employed. The library was linked to PEGA-beads via methionine so that the peptides could be selectively removed from the resin by cleavage with CNBr. A disulphide bridge was formed between the bead-linked library and a peptide containing...

  15. Fabrication of organically modified oxygen sensing film based on fluorescent quenching

    Institute of Scientific and Technical Information of China (English)

    XIN LingLing; XIAO LaiLong; ZHAO Li; CHEN Xi; WANG XiaoRu

    2007-01-01

    An organically modified silicate (ORMOSIL) as a matrix for oxygen-sensitive sensor, in which dimethyldimethoxysilane was selected as an organic modifier in the precursor, is described. The sensing film with tris-(4,7-diphenyl-1,10-phenanthroline) ruthenium(II) as an indicator developed in this paper was characterized by efficient quenching by oxygen. Blue light-emitting diodes ((max = 475 nm) were employed as light excitation source. The linear range of the dissolved oxygen was from 0.5 to 16 (g/mL. The measured RSD was 2%, the response time (t95) was 60 s, and the determination limit was 0.2 (g/mL. A portable and inexpensive luminescence-based sensor was established and applied to the determination of dissolved oxygen in the surface water.

  16. A comparative study of oxygen transmission rates through polymer films based on fluorescence quenching

    DEFF Research Database (Denmark)

    Siró, Istvan; Plackett, David; Sommer-Larsen, Peter

    2010-01-01

    as a potential new instrument for measuring the oxygen permeability of packaging films. The fluorescence-based permeability tester was validated against two existing commercial oxygen permeability measuring devices, the Mocon Ox-Tran 2/20 and PBI-Dansensor OPT-5000. Oxygen transmission rates (OTR) of polylactide...

  17. A convenient method for determination of quizalofop-p-ethyl based on the fluorescence quenching of eosin Y in the presence of Pd(II)

    Science.gov (United States)

    Wu, Huan; Zhao, Yanmei; Tan, Xuanping; Zeng, Xiaoqing; Guo, Yuan; Yang, Jidong

    2017-03-01

    A convenient fluorescence quenching method for determination of Quizalofop-p-ethyl(Qpe) was proposed in this paper. Eosin Y(EY) is a red dye with strong green fluorescence (λex/λem = 519/540 nm). The interaction between EY, Pd(II) and Qpe was investigated by fluorescence spectroscopy, resonance Rayleigh scattering(RRS) and UV-Vis absorption. Based on changes in spectrum, Pd(II) associated with Qpe giving a positively charged chelate firstly, then reacted with EY through electrostatic and hydrophobic interaction formed ternary chelate could be demonstrated. Under optimum conditions, the fluorescence intensity of EY could be quenched by Qpe in the presence of Pd(II) and the RRS intensity had a remarkable enhancement, which was directly proportional to the Qpe concentration within a certain concentration range, respectively. Based on the fluorescence quenching of EY-Pd(II) system by Qpe, a novel, convenient and specific method for Qpe determination was developed. To our knowledge, this is the first fluorescence method for determination of Qpe was reported. The detection limit for Qpe was 20.3 ng/mL and the quantitative determination range was 0.04-1.0 μg/mL. The method was highly sensitive and had larger detection range compared to other methods. The influence of coexisting substances was investigated with good anti-interference ability. The new analytical method has been applied to determine of Qpe in real samples with satisfactory results.

  18. Systematic investigation of the influence of CdTe QDs size on the toxic interaction with human serum albumin by fluorescence quenching method

    Science.gov (United States)

    Xiao, Jianbo; Bai, Yalong; Wang, Yuanfeng; Chen, Jingwen; Wei, Xinlin

    2010-06-01

    Quantum dots (QDs) are complementary tools to the organic fluorescent dyes used in biological system. Investigation of QDs biological toxicity has attracted great interest for their depth application. Here, the fluorescence quenching method was used to investigate the influence of CdTe QDs size on the toxic interaction with human serum albumin (HSA). Two aqueous-compatible CdTe QDs with maximum emission of 535 nm (green-emitting QDs, G-QDs, 2.04 nm) and 654 nm (red-emitting QDs, R-QDs, 3.79 nm) were tested. The fluorescence quenching results indicated that the quenching effect of QDs on HSA fluorescence depended on the size and the nature of quenching is not dynamic but probably static, resulting in forming QDs-HSA complexes. The binding constants and the number of binding sites between R-QDs and HSA were higher than those of G-QDs. The results illustrated that the size of CdTe quantum dots affected the affinity for HSA and the increasing size of QDs enhanced the affinity for HSA. The values of lg Ka are proportional to the number of binding sites ( n). This result confirms the method used here is suitable to study the toxic interaction between QDs and HSA.

  19. Electric field effects on internal conversion : An alternative mechanism for field-induced fluorescence quenching of MEH-PPV and its oligomers in the low concentration limit

    NARCIS (Netherlands)

    Smith, Timothy M.; Kim, Jung; Peteanu, Linda A.; Wildeman, Jurjen

    2007-01-01

    In a previously published study (J. Phys. Chem. B 2006, 110, 7732-7742), we reported field-induced fluorescence quenching in both poly[2-methoxy,5-(2'-ethylhexyloxy)-1,4-phenylene vinylene] (MEH-PPV) and several model oligomers in solvent glass matrices at high dilution (<0.1% by weight). The observ

  20. Internally quenched fluorescent peptide libraries with randomized sequences designed to detect endopeptidases.

    Science.gov (United States)

    Oliveira, Lilian C G; Silva, Vinícius O; Okamoto, Debora N; Kondo, Marcia Y; Santos, Saara M B; Hirata, Isaura Y; Vallim, Marcelo A; Pascon, Renata C; Gouvea, Iuri E; Juliano, Maria A; Juliano, Luiz

    2012-02-01

    Identification of synthetic peptide substrates for novel peptidases is an essential step for their study. With this purpose we synthesized fluorescence resonance energy transfer (FRET) peptide libraries Abz (or MCA)-GXXXXXQ-EDDnp and Abz (or MCA)-GXXZXXQ-EDDnp, where X consists of an equimolar mixture of all amino acids, the Z position is fixed with one of the proteinogenic amino acids (cysteine was excluded), Abz (ortho-aminobenzoic acid) or MCA ([7-amino-4-methyl]coumarin) is the fluorescence donor and Q-EDDnp (glutamine-[N-(2,4-dinitrophenyl)-ethylenediamine]) is the fluorescence acceptor. The peptide libraries MCA-GXXX↓XXQ-EDDnp and MCA-GXXZ↓XXQ-EDDnp were cleaved as indicated (↓) by trypsin, chymotrypsin, cathepsin L, pepsin A, and Eqolisin as confirmed by Edman degradation of the products derived from the digestion of these libraries. The best hydrolyzed Abz-GXXZXXQ-EDDnp sublibraries by these proteases, including Dengue 2 virus NS2B-NS3 protease, contained amino acids at the Z position that are reported to be well accepted by their S(1) subsite. The pH profiles of the hydrolytic activities of these canonical proteases on the libraries were similar to those reported for typical substrates. The FRET peptide libraries provide an efficient and simple approach for detecting nanomolar concentrations of endopeptidases and are useful for initial specificity characterization as performed for two proteases secreted by a Bacillus subtilis.

  1. Silver Nanoparticle-Based Fluorescence-Quenching Lateral Flow Immunoassay for Sensitive Detection of Ochratoxin A in Grape Juice and Wine

    Directory of Open Access Journals (Sweden)

    Hu Jiang

    2017-02-01

    Full Text Available A silver nanoparticle (AgNP-based fluorescence-quenching lateral flow immunoassay with competitive format (cLFIA was developed for sensitive detection of ochratoxin A (OTA in grape juice and wine samples in the present study. The Ru(phen 3 2 + -doped silica nanoparticles (RuNPs were sprayed on the test and control line zones as background fluorescence signals. The AgNPs were designed as the fluorescence quenchers of RuNPs because they can block the exciting light transferring to the RuNP molecules. The proposed method exhibited high sensitivity for OTA detection, with a detection limit of 0.06 µg/L under optimized conditions. The method also exhibited a good linear range for OTA quantitative analysis from 0.08 µg/L to 5.0 µg/L. The reliability of the fluorescence-quenching cLFIA method was evaluated through analysis of the OTA-spiked red grape wine and juice samples. The average recoveries ranged from 88.0% to 110.0% in red grape wine and from 92.0% to 110.0% in grape juice. Meanwhile, less than a 10% coefficient variation indicated an acceptable precision of the cLFIA method. In summary, the new AgNP-based fluorescence-quenching cLFIA is a simple, rapid, sensitive, and accurate method for quantitative detection of OTA in grape juice and wine or other foodstuffs.

  2. Fluorescence quenching and photobleaching in Au/Rh6G nanoassemblies: impact of competition between radiative and non-radiative decay

    Science.gov (United States)

    Dong, L.; Ye, F.; Hu, J.; Popov, S.; Friberg, A. T.; Muhammed, M.

    2011-04-01

    Fluorescence quenching from nanoassemblies formed by Rhodamine 6G and gold nanoparticles (Au NPs) of 2.6 nm radius has been investigated. The presence of Au NPs also induces long-term degradation of the photostability (photobleaching) of Rhodamine 6G used as gain medium in a Fabry-Perot laser cavity. We found that the degradation gets profound when the Au NPs concentration is significantly increased. Calculation of the radiative rate and direct time-resolved measurement of the fluorescence decay indicates that both the decrease of radiative decay rate and increase of non-radiative decay rate are responsible for the fluorescence quenching and photostability degradation. An energy transfer from the dye molecules to gold nanoparticles is dominating within the small distance between them and suppresses the quantum efficiency of Rhodamine 6G drastically. In long time scale, the photobleaching rate was slowing down, and laser output intensity reached a stabilized level which depends on the gold nanoparticles concentration.

  3. Efficient fluorescence quenching in electrochemically exfoliated graphene decorated with gold nanoparticles

    Science.gov (United States)

    Hurtado-Morales, M.; Ortiz, M.; Acuña, C.; Nerl, H. C.; Nicolosi, V.; Hernández, Y.

    2016-07-01

    High surface area graphene sheets were obtained by electrochemical exfoliation of graphite in an acid medium under constant potential conditions. Filtration and centrifugation processes played an important role in order to obtain stable dispersions in water. Scanning electron microscopy and transmission electron microscopy imaging revealed highly exfoliated crystalline samples of ∼5 μm. Raman, Fourier transform infrared and x-ray photoelectron spectroscopy further confirmed the high quality of the exfoliated material. The electrochemically exfoliated graphene (EEG) was decorated with gold nanoparticles (AuNPs) using sodium cholate as a buffer layer. This approach allowed for a non-covalent functionalization without altering the desirable electronic properties of the EEG. The AuNP-EEG samples were characterized with various techniques including absorbance and fluorescence spectroscopy. These samples displayed a fluorescence signal using an excitation wavelength of 290 nm. The calculated quantum yield (Φ) for these samples was 40.04%, a high efficiency compared to previous studies using solution processable graphene.

  4. The Sakaguchi reaction product quenches phycobilisome fluorescence, allowing determination of the arginine concentration in cells of Anabaena strain PCC 7120.

    Science.gov (United States)

    Ke, Shan; Haselkorn, Robert

    2013-01-01

    The filamentous cyanobacterium Anabaena fixes nitrogen in specialized cells called heterocysts. The immediate product of fixation, ammonia, is known to be assimilated by addition to glutamate to make glutamine. How fixed nitrogen is transported along the filament to the 10 to 20 vegetative cells that separate heterocysts is unknown. N-fixing heterocysts accumulate an insoluble polymer containing aspartate and arginine at the cell poles. Lockau's group has proposed that the polymer is degraded at the poles to provide a mobile carrier, arginine, to the vegetative cells (R. Richter, M. Hejazi, R. Kraft, K. Ziegler, and W. Lockau, Eur. J. Biochem. 263:163-169, 1999). We wished to use the Sakaguchi reaction for arginine to determine the relative cellular concentration of arginine along the filament. At present, the methods for measuring absorption of the Sakaguchi reaction product at 520 nm are insufficiently sensitive for that purpose. However, that product quenches the fluorescence of phycobiliproteins, which we have adapted to a determination of arginine. Our results are consistent with the proposal that arginine is a principal nitrogen carrier from heterocysts to vegetative cells in Anabaena.

  5. Highly sensitive and adaptable fluorescence-quenched pair discloses the substrate specificity profiles in diverse protease families

    Science.gov (United States)

    Poreba, Marcin; Szalek, Aleksandra; Rut, Wioletta; Kasperkiewicz, Paulina; Rutkowska-Wlodarczyk, Izabela; Snipas, Scott J.; Itoh, Yoshifumi; Turk, Dusan; Turk, Boris; Overall, Christopher M.; Kaczmarek, Leszek; Salvesen, Guy S.; Drag, Marcin

    2017-01-01

    Internally quenched fluorescent (IQF) peptide substrates originating from FRET (Förster Resonance Energy Transfer) are powerful tool for examining the activity and specificity of proteases, and a variety of donor/acceptor pairs are extensively used to design individual substrates and combinatorial libraries. We developed a highly sensitive and adaptable donor/acceptor pair that can be used to investigate the substrate specificity of cysteine proteases, serine proteases and metalloproteinases. This novel pair comprises 7-amino-4-carbamoylmethylcoumarin (ACC) as the fluorophore and 2,4-dinitrophenyl-lysine (Lys(DNP)) as the quencher. Using caspase-3, caspase-7, caspase-8, neutrophil elastase, legumain, and two matrix metalloproteinases (MMP2 and MMP9), we demonstrated that substrates containing ACC/Lys(DNP) exhibit 7 to 10 times higher sensitivity than conventional 7-methoxy-coumarin-4-yl acetic acid (MCA)/Lys(DNP) substrates; thus, substantially lower amounts of substrate and enzyme can be used for each assay. We therefore propose that the ACC/Lys(DNP) pair can be considered a novel and sensitive scaffold for designing substrates for any group of endopeptidases. We further demonstrate that IQF substrates containing unnatural amino acids can be used to investigate protease activities/specificities for peptides containing post-translationally modified amino acids. Finally, we used IQF substrates to re-investigate the P1-Asp characteristic of caspases, thus demonstrating that some human caspases can also hydrolyze substrates after glutamic acid. PMID:28230157

  6. Selective Detection of Mercury(Ⅱ) and Copper(Ⅱ) Based on the Opposite Size-dependent Fluorescence Quenching of CdTe Quantum Dots

    Institute of Scientific and Technical Information of China (English)

    XIA Yun-Sheng; CAO Chun; ZHU Chang-Qing

    2007-01-01

    Three different size CdTe quantum dots (QDs) capped by 3-mercaptopropionic acid (MPA) have been prepared in aqueous solutions,and their interactions with Cu2+ and Hg2+ have been investigated.The opposite size-dependent fluorescence quenching of CdTe QDs by Hg2+ and Cu2+ was observed: Hg2+ quenched smaller particles more efficiently than larger ones while larger particles were more markedly quenched by Cu2+.Based on the different size responses,Hg2+ and Cu2+ were respectively detected with high sensitivity and selectivity,for the first time,using the QDs with different sizes but the same components and capping ligands.

  7. Unraveling the exciton quenching mechanism of quantum dots on antimony-doped SnO₂ films by transient absorption and single dot fluorescence spectroscopy.

    Science.gov (United States)

    Song, Nianhui; Zhu, Haiming; Liu, Zheng; Huang, Zhuangqun; Wu, David; Lian, Tianquan

    2013-02-26

    Integrating quantum dots (QDs) into modern optoelectronic devices requires an understanding of how a transparent conducting substrate affects the properties of QDs, especially their excited-state dynamics. Here, the exciton quenching dynamics of core/multishell (CdSe/CdS(3ML)ZnCdS(2ML)ZnS(2ML)) quantum dots deposited on glass, tin oxide (SnO₂), and antimony (Sb)-doped tin oxide (ATO) films are studied by transient absorption and single QD fluorescence spectroscopic methods. By comparing ensemble-averaged fluorescence decay and transient absorption kinetics, we show that, for QDs on SnO₂, the exciton is quenched by electron transfer from the QD to SnO₂. At the QD-ATO interface, much faster exciton quenching rates are observed and attributed to fast Auger recombination in charged QDs formed by Fermi level equilibration between the QD and n-doped ATO. Single QDs on SnO₂ and ATO show similar blinking dynamics with correlated fluctuations of emission intensities and lifetimes. Compared to QDs on SnO₂, QDs on ATO films show larger variation of average exciton quenching rates, which is attributed to a broad distribution of the number of charges and nature of charging sites on the QD surface.

  8. [Effect of Methylmercury on the Light Dependence Fluorescence Parameters in a Green Alga Chlamydomonas moewusii].

    Science.gov (United States)

    Protopopov, F F; Matorin, D N; Seifullina, N H; Bratkovskaya, L B; Zayadan, B K

    2015-01-01

    The effect of a dangerous toxic substance, methylmercury, on light dependence curves of chlorophyll fluorescence in Chlamydomonas moewusii was studied. We found low concentration of methylmercury (10(-7) M) to cause a decrease in the relative rate of the non-cyclic electron transport activity of PS 2, a decline in the maximum utilization of light energy (α), and a decline in the saturation light intensity (E(s)). Non-photochemical fluorescence quenching increased after short-term exposure and decreased in the course of prolonged incubation. These parameters were more sensitive to the action of the toxic substance than the widely used parameter F(V)/F(M), which reflects the maximum quantum yield of PS 2. We propose the use of the method of fast measurement of light dependence curves of fluorescence to detect the changes in algal cells at the early stages of exposure to mercury salts.

  9. Anaerobiosis induced state transition: a non photochemical reduction of PQ pool mediated by NDH in Arabidopsis thaliana.

    Directory of Open Access Journals (Sweden)

    Sreedhar Nellaepalli

    Full Text Available BACKGROUND: Non photochemical reduction of PQ pool and mobilization of LHCII between PSII and PSI are found to be linked under abiotic stress conditions. The interaction of non photochemical reduction of PQ pool and state transitions associated physiological changes are critically important under anaerobic condition in higher plants. METHODOLOGY/FINDINGS: The present study focused on the effect of anaerobiosis on non-photochemical reduction of PQ pool which trigger state II transition in Arabidopsis thaliana. Upon exposure to dark-anaerobic condition the shape of the OJIP transient rise is completely altered where as in aerobic treated leaves the rise is unaltered. Rise in F(o and F(J was due to the loss of oxidized PQ pool as the PQ pool becomes more reduced. The increase in F(o' was due to the non photochemical reduction of PQ pool which activated STN7 kinase and induced LHCII phosphorylation under anaerobic condition. Further, it was observed that the phosphorylated LHCII is migrated and associated with PSI supercomplex increasing its absorption cross-section. Furthermore, evidences from crr2-2 (NDH mutant and pgr5 mutants (deficient in non NDH pathway of cyclic electron transport have indicated that NDH is responsible for non photochemical reduction of the PQ pool. We propose that dark anaerobic condition accelerates production of reducing equivalents (such as NADPH by various metabolic pathways which reduce PQ pool and is mediated by NDH leading to state II transition. CONCLUSIONS/SIGNIFICANCE: Anaerobic condition triggers non photochemical reduction of PQ pool mediated by NDH complex. The reduced PQ pool activates STN7 kinase leading to state II transition in A. thaliana.

  10. "Super-quenching" state protects Symbiodinium from thermal stress - Implications for coral bleaching.

    Science.gov (United States)

    Slavov, Chavdar; Schrameyer, Verena; Reus, Michael; Ralph, Peter J; Hill, Ross; Büchel, Claudia; Larkum, Anthony W D; Holzwarth, Alfred R

    2016-06-01

    The global rise in sea surface temperatures causes regular exposure of corals to high temperature and high light stress, leading to worldwide disastrous coral bleaching events (loss of symbiotic dinoflagellates (Symbiodinium) from reef-building corals). Our picosecond chlorophyll fluorescence experiments on cultured Symbiodinium clade C cells exposed to coral bleaching conditions uncovered the transformations of the alga's photosynthetic apparatus (PSA) that activate an extremely efficient non-photochemical "super-quenching" mechanism. The mechanism is associated with a transition from an initially heterogeneous photosystem II (PSII) pool to a homogeneous "spillover" pool, where nearly all excitation energy is transferred to photosystem I (PSI). There, the inherently higher stability of PSI and high quenching efficiency of P(700)(+) allow dumping of PSII excess excitation energy into heat, resulting in almost complete cessation of photosynthetic electron transport (PET). This potentially reversible "super-quenching" mechanism protects the PSA against destruction at the cost of a loss of photosynthetic activity. We suggest that the inhibition of PET and the consequent inhibition of organic carbon production (e.g. sugars) in the symbiotic Symbiodinium provide a trigger for the symbiont expulsion, i.e. bleaching.

  11. Investigations of ion transport through nanoscale polymer membranes by fluorescence quenching of CdSe/CdS quantum dot/quantum rods.

    Science.gov (United States)

    Merkl, Jan-Philip; Wolter, Christopher; Flessau, Sandra; Schmidtke, Christian; Ostermann, Johannes; Feld, Artur; Mews, Alf; Weller, Horst

    2016-04-14

    Detailed steady-state and time-resolved fluorescence quenching measurements give deep insight into ion transport through nanometer thick diblock copolymer membranes, which were assembled as biocompatible shell material around CdSe/CdS quantum dot in quantum rods. We discuss the role of polymer chain length, intermolecular cross-linking and nanopore formation by analysing electron transfer processes from the photoexcited QDQRs to Cu(II) ions, which accumulate in the polymer membrane. Fluorescence investigations on single particle level additionally allow identifying ensemble inhomogeneities.

  12. Development and validation of a new spectrofluorimetric method for the determination of some beta-blockers through fluorescence quenching of eosin Y. Application to content uniformity test

    Directory of Open Access Journals (Sweden)

    Derayea Sayed M

    2016-01-01

    Full Text Available A simple, rapid, sensitive and economic spectrofluorimetric method has been developed and validated for determination of some β-adrenergic blocking agents namely; betaxolol hydrochloride (BTX, carvedilol (CAR, labetalol hydrochloride (LBT, nebivolol hydrochloride (NEB and propranolol hydrochloride (PRO. The method is based on the quenching effect of the cited drugs on the fluorescence intensity of eosin Y at pH 3.4 (acetate buffer. The fluorescence quenching is due to the formation of an ion-pair complex and was measured without extraction at 545 nm (λex. 301.5 nm. The factors affecting the formation of the ion-pair complex were carefully studied and optimized. Under the optimal conditions, the linear ranges for the relationship between the fluorescence quenching value and the concentration of the investigated drugs were 100-2500, 150-2500 and 50-2250 ng mL-1 for (BTX, CAR, (LBT, NEB and (PRO respectively. The method was validated according to ICH guidelines and was applied for determination of the cited drugs in pharmaceutical dosage forms with excellent recoveries. In addition, content uniformity testing of some commercial dosage forms was checked by the proposed method.

  13. Correlation of electronic carotenoid-chlorophyll interactions and fluorescence quenching with the aggregation of native LHC II and chlorophyll deficient mutants

    Energy Technology Data Exchange (ETDEWEB)

    Liao, Pen-Nan; Bode, Stefan [Technische Universitaet Braunschweig, Institute for Physical and Theoretical Chemistry, Department for Biophysical Chemistry, Hans-Sommer-Strasse 10, 38106 Braunschweig (Germany); Wilk, Laura [Max Planck Institute of Biophysics, Department of Structural Biology, Max-von-Laue-Strasse 3, 60438 Frankfurt am Main (Germany); Hafi, Nour [Technische Universitaet Braunschweig, Institute for Physical and Theoretical Chemistry, Department for Biophysical Chemistry, Hans-Sommer-Strasse 10, 38106 Braunschweig (Germany); Walla, Peter J., E-mail: pwalla@gwdg.de [Technische Universitaet Braunschweig, Institute for Physical and Theoretical Chemistry, Department for Biophysical Chemistry, Hans-Sommer-Strasse 10, 38106 Braunschweig (Germany); Max Planck Institute for Biophysical Chemistry, Department of Spectroscopy and Photochemical Kinetics, Am Fassberg 11, 37077 Goettingen (Germany)

    2010-07-19

    The aggregation dependent correlation between fluorescence quenching and the electronic carotenoid-chlorophyll interactions, {phi}{sub Coupling}{sup Car S{sub 1}-Chl}, as measured by comparing chlorophyll fluorescence observed after two- and one-photon excitation, has been investigated using native LHC II samples as well as mutants lacking Chl 2 and Chl 13. For native LHC II the same linear correlation between {phi}{sub Coupling}{sup Car S{sub 1}-Chl} and the fluorescence quenching was observed as previously reported for the pH and Zea-dependent quenching of LHC II . In order to elucidate which carotenoid-chlorophyll pair might dominate this correlation we also investigated the mutants lacking Chl 2 and Chl 13. However, also with these mutants the same linear correlation as for native LHC II was observed. This provides indication that these two chlorophylls play only a minor role for the observed effects. Nevertheless, we also conclude that this does not exclude that their neighboured carotenoids, lutein 1 and neoxanthin, might interact electronically with other chlorophylls close by.

  14. Fluorescence quenching studies on the interaction of catechin-quinone with CdTe quantum dots. Mechanism elucidation and feasibility studies.

    Science.gov (United States)

    Dwiecki, Krzysztof; Neunert, Grażyna; Nogala-Kałucka, Małgorzata; Polewski, Krzysztof

    2015-01-01

    Changes of the photoluminescent properties of QD in the presence of oxidized catechin (CQ) were investigated by absorption, steady-state fluorescence, fluorescence lifetime and dynamic light scattering measurements. Photoluminescence intensity and fluorescence lifetime was decreasing with increasing CQ concentration. Dynamic light scattering technique found the hydrodynamic diameter of QD suspension in water is in range of 45 nm, whereas in presence of CQ increased to mean values of 67 nm. Calculated from absorption peak position of excition band indicated on average QD size of 3.2 nm. Emission spectroscopy and time-resolved emission studies confirmed preservation of electronic band structure in QD-CQ aggregates. On basis of the presented results, the elucidated mechanism of QD fluorescence quenching is a result of the interaction between QD and CQ due to electron transfer and electrostatic attraction. The results of fluorescence quenching of water-soluble CdTe quantum dot (QD) capped with thiocarboxylic acid were used to implement a simple and fast method to determine the presence of native antioxidant quinones in aqueous solutions. Feasibility studies on this method carried out with oxidized catechin showed a linear relation between the QD emission and quencher concentration, in range from 1 up to 200 μM. The wide linear range of concentration dependence makes it possible to apply this method for the fast and sensitive detection of quinones in solutions.

  15. Electric-Field-Induced Fluorescence Quenching in Polyfluorene, Ladder-Type Polymers, and MEH-PPV Evidence for Field Effects on Internal Conversion Rates in the Low Concentration Limit

    NARCIS (Netherlands)

    Moscatelli, Alberto; Livingston, Kathryn; So, Woong Young; Lee, Suk Jun; Scherf, Ullrich; Wildeman, Jurjen; Peteanu, Linda A.

    2010-01-01

    Electric field-induced fluorescence quenching has been measured for a series of conjugated polymers with applications in organic light-emitting diodes Electrofluorescence measurements on isolated chains in a glassy matrix at 77 K show that the quenching efficiency for poly[2-methoxy-5-(2-ethylhexylo

  16. Fluorescence Quenching of CdSe/ZnS Quantum Dots by Using Black Hole Quencher Molecules Intermediated With Peptide for Biosensing Application.

    Science.gov (United States)

    Pillai, Sreenadh Sasidharan; Yukawa, Hiroshi; Onoshima, Daisuke; Biju, Vasudevanpillai; Baba, Yoshinobu

    2015-12-17

    Quantum dots (QDs) have recently been investigated as fluorescent probes for detecting a very small number of biomolecules and live cells; however, the establishment of molecular imaging technology with on-off control of QD fluorescence remains to be established. Here we have achieved the fluorescence off state of QDs with the conjugation of black hole quencher (BHQ) molecules intermediated with peptide by using streptavidin-QDs585 and biotin-pep-BHQ-1. The fluorescence of streptavidin-QDs585 was decreased by the addition of biotin-pep-BHQ-1 in a dose-dependent manner. It has been suggested that the decrease in QDs585 fluorescence occurred through a Förster resonance energy transfer (FRET) mechanism from the analysis of fluorescence intensity and lifetime of streptavidin-QDs585 and QDs585-pep-BHQ-1. QDs585 fluorescence could be quenched by more than 60% efficiency in this system. The sequence of intermediate peptide (pep) was GPLGVRGK, which can be cleaved by matrix metalloproteinases (MMPs) produced by cancer cells. QDs585-pep-BHQ-1 is thus expected to detect the MMP production by the recovery of QDs585 fluorescence as a new bioanalytical agent for molecular imaging.

  17. Detection of DNA via the fluorescence quenching of Mn-doped ZnSe D-dots/doxorubicin/DNA ternary complexes system.

    Science.gov (United States)

    Gao, Xue; Niu, Lu; Su, Xingguang

    2012-01-01

    This manuscript reports a method for the detection of double-stranded DNA, based on Mn:ZnSe d-dots and intercalating agent doxorubicin (DOX). DOX can quench the photoluminescence (PL) of Mn:ZnSe d-dots through photoinduced electron transfer process, after binding with Mn:ZnSe d-dots. The addition of DNA can result in the formation of the Mn:ZnSe d-dots-DOX-DNA ternary complexes, the fluorescence of the Mn:ZnSe d-dots-DOX complexes would be further quenched by the addition of DNA, thus allowing the detection of DNA. The formation mechanism of the Mn:ZnSe d-dots-DOX-DNA ternary complexes was studied in detail in this paper. Under optimal conditions, the quenched fluorescence intensity of Mn:ZnSe d-dots-DOX system are perfectly described by Stern-Volmer equation with the concentration of hsDNA ranging from 0.006 μg mL(-1) to 6.4 μg mL(-1). The detection limit (S/N = 3) for hsDNA is 0.5 ng mL(-1). The proposed method was successfully applied to the detection of DNA in synthetic samples and the results were satisfactory.

  18. Electron-transfer fluorescence quenching processes in coaggregates between excited N-alkylcarbazoles as electron donors and 2, 4-dinitrophenyl carboxylates or pentafiuorophenyl carboxylates as acceptors

    Institute of Scientific and Technical Information of China (English)

    SHI, Ji-Liang; YI, Hu-Nan; XU, Jia-Yi; JIANG, Xi-Kui

    2000-01-01

    Electron-transfer processes facilitated by hydrophobiclipophilic interaction (HLI) between excited N-alkylcarbazoles (1-n, n=4, 8, 12, 16) as electron donors and 2,4dinnrophenyl carboxylates (2-n, n = 4, 8, 12, 16) or pentafluorophenyl carboxylates (3-n, n = 4, 8, 12, 16) as electron acceptors have been investigated by means of fluorescence spectroscopy in aqueous or aquiorgano binary mixtures.The fluorescence quenching of-n* by2-n or-n indicates that preassociation precedes the electron transfer. The extent of HLI-drtven coaggregation of the acceptor and the donor may be assessed from the B value of the equation I0/I = A + B [Q]. The chain-length effect and possibly also a chain-foldability effect, as well as the solvent aggregating power (SAgP)effect have been observed. Comparison of the quenching constants ( B ) for 1-n* /2-n combinations and 1-n* / 3-n combinations shows that the order of increasing B values for the quenching processes is 3-n < 2-n.

  19. Effect of Nitrogen Fertilization on Leaf Chlorophyll Fluorescence in Field-Grown Winter Wheat Under Rainfed Conditions

    Institute of Scientific and Technical Information of China (English)

    SHANGGUAN Zhou-ping; ZHENG Shu-xia; ZHANG Lei-ming; XUE Qing-wu

    2005-01-01

    The effect of nitrogen fertilization on leaf chlorophyll fluorescence was studied in field-grown winter wheat during grain filling under rainfed conditions in Loess Plateau. Results showed that the actual photochemical efficiency of PS Ⅱ reaction center (Ф PS Ⅱ) decreased significantly as leaf water stress progressed, however, the Ф PS was increased by nitrogen fertilization. The Ф PS Ⅱ of 0, 90 and 180 kg ha-1 nitrogen treatments at noon were 0.197, 0.279 and 0.283, respectively, which decreased by 57.7, 56.4 and 40.2% as compared was even higher than that in the moming. Application of nitrogen fertilizer significantly increased maximum photochemical efficiency (Fv/Fm), photochemical quenching coefficient (qP) and non-photochemical quenching coefficient (qNP). These results indicated that application of nitrogen fertilizer could increase the light energy conversion efficiency, the potential activity of photosynthetic reaction center, and the non-photochemical dissipation of excess light energy, which can prevent leaf photosynthetic apparatus from damage of treatments, indicating that the excess nitrogen was unfavorable to photosynthesis.

  20. Detection of herbicide effects on pigment composition and PSII photochemistry in Helianthus annuus by Raman spectroscopy and chlorophyll a fluorescence.

    Science.gov (United States)

    Vítek, Petr; Novotná, Kateřina; Hodaňová, Petra; Rapantová, Barbora; Klem, Karel

    2017-01-01

    The effects of herbicides from three mode-of-action groups - inhibitors of protoporphyrinogen oxidase (carfentrazone-ethyl), inhibitors of carotenoid biosynthesis (mesotrione, clomazone, and diflufenican), and inhibitors of acetolactate synthase (amidosulfuron) - were studied in sunflower plants (Helianthus annuus). Raman spectroscopy, chlorophyll fluorescence (ChlF) imaging, and UV screening of ChlF were combined to evaluate changes in pigment composition, photosystem II (PSII) photochemistry, and non-photochemical quenching in plant leaves 6d after herbicide application. The Raman signals of phenolic compounds, carotenoids, and chlorophyll were evaluated and differences in their intensity ratios were observed. Strongly augmented relative content of phenolic compounds was observed in the case of amidosulfuron-treated plants, with a simultaneous decrease in the chlorophyll/carotenoid intensity ratio. The results were confirmed by in vivo measurement of flavonols using UV screening of ChlF. Herbicides from the group of carotenoid biosynthesis inhibitors significantly decreased both the maximum quantum efficiency of PSII and non-photochemical quenching as determined by ChlF. Resonance Raman imaging (mapping) data with high resolution (150,000-200,000 spectra) are presented, showing the distribution of carotenoids in H. annuus leaves treated by two of the herbicides acting as inhibitors of carotenoid biosynthesis (clomazone or diflufenican). Clear signs were observed that the treatment induced carotenoid depletion within sunflower leaves. The depletion spatial pattern registered differed depending on the type of herbicide applied.

  1. Detection of herbicide effects on pigment composition and PSII photochemistry in Helianthus annuus by Raman spectroscopy and chlorophyll a fluorescence

    Science.gov (United States)

    Vítek, Petr; Novotná, Kateřina; Hodaňová, Petra; Rapantová, Barbora; Klem, Karel

    2017-01-01

    The effects of herbicides from three mode-of-action groups - inhibitors of protoporphyrinogen oxidase (carfentrazone-ethyl), inhibitors of carotenoid biosynthesis (mesotrione, clomazone, and diflufenican), and inhibitors of acetolactate synthase (amidosulfuron) - were studied in sunflower plants (Helianthus annuus). Raman spectroscopy, chlorophyll fluorescence (ChlF) imaging, and UV screening of ChlF were combined to evaluate changes in pigment composition, photosystem II (PSII) photochemistry, and non-photochemical quenching in plant leaves 6 d after herbicide application. The Raman signals of phenolic compounds, carotenoids, and chlorophyll were evaluated and differences in their intensity ratios were observed. Strongly augmented relative content of phenolic compounds was observed in the case of amidosulfuron-treated plants, with a simultaneous decrease in the chlorophyll/carotenoid intensity ratio. The results were confirmed by in vivo measurement of flavonols using UV screening of ChlF. Herbicides from the group of carotenoid biosynthesis inhibitors significantly decreased both the maximum quantum efficiency of PSII and non-photochemical quenching as determined by ChlF. Resonance Raman imaging (mapping) data with high resolution (150,000-200,000 spectra) are presented, showing the distribution of carotenoids in H. annuus leaves treated by two of the herbicides acting as inhibitors of carotenoid biosynthesis (clomazone or diflufenican). Clear signs were observed that the treatment induced carotenoid depletion within sunflower leaves. The depletion spatial pattern registered differed depending on the type of herbicide applied.

  2. 碳纳米管-苯胺电荷转移复合物中的胺荧光淬灭效应%Quenching Effects of Amine on Fluorescence of Carbon Nanotube-Aniline Charge Transfer Complex

    Institute of Scientific and Technical Information of China (English)

    SUN Xu-feng; WANG Yu; JIN Wei-jun

    2005-01-01

    Under refluxing, carbon nanotube (CNT) and aniline (An) can form the charge transfer complex (CTC) of CNT-An.The corresponding fluorescence emission peaks lied at 564nm and 606nm, respectively, with the excitation wavelength of 516nm in the acetone solution. The quenching effects of various amines on CNT- An CTC fluorescence were investigated in detail.

  3. The mechanism of interactions between tea polyphenols and porcine pancreatic alpha-amylase: Analysis by inhibition kinetics, fluorescence quenching, differential scanning calorimetry and isothermal titration calorimetry.

    Science.gov (United States)

    Sun, Lijun; Gidley, Michael J; Warren, Frederick J

    2017-10-01

    This study aims to use a combination of biochemical and biophysical methods to derive greater mechanistic understanding of the interactions between tea polyphenols and porcine pancreatic α-amylase (PPA). The interaction mechanism was studied through fluorescence quenching (FQ), differential scanning calorimetry (DSC) and isothermal titration calorimetry (ITC) and compared with inhibition kinetics. The results showed that a higher quenching effect of polyphenols corresponded to a stronger inhibitory activity against PPA. The red-shift of maximum emission wavelength of PPA bound with some polyphenols indicated a potential structural unfolding of PPA. This was also suggested by the decreased thermostability of PPA with these polyphenols in DSC thermograms. Through thermodynamic binding analysis of ITC and inhibition kinetics, the equilibrium of competitive inhibition was shown to result from the binding of particularly galloylated polyphenols with specific sites on PPA. There were positive linear correlations between the reciprocal of competitive inhibition constant (1/Kic ), quenching constant (KFQ ) and binding constant (Kitc ). The combination of inhibition kinetics, FQ, DSC and ITC can reasonably characterize the interactions between tea polyphenols and PPA. The galloyl moiety is an important group in catechins and theaflavins in terms of binding with and inhibiting the activity of PPA. © 2017 The Authors. Molecular Nutrition & Food Research Published by WILEY-VCH Verlag GmbH & Co. KGaA, Weinheim.

  4. Label-free turn-on fluorescent detection of melamine based on the anti-quenching ability of Hg 2+ to gold nanoclusters.

    Science.gov (United States)

    Dai, Haichao; Shi, Yan; Wang, Yilin; Sun, Yujing; Hu, Jingting; Ni, Pengjuan; Li, Zhuang

    2014-03-15

    In this work, we proposed a facile, environmentally friendly and cost-effective assay for melamine with BSA-stabilized gold nanoclusters (AuNCs) as a fluorescence reader. Melamine, which has a multi-nitrogen heterocyclic ring, is prone to coordinate with Hg(2+). This property causes the anti-quenching ability of Hg(2+) to AuNCs through decreasing the metallophilic interaction between Hg(2+) and Au(+). By this method, detection limit down to 0.15 µM is obtained, which is approximately 130 times lower than that of the US food and Drug Administration estimated melamine safety limit of 20 µM. Furthermore, several real samples spiked with melamine, including raw milk and milk powder, are analyzed using the sensing system with excellent recoveries. This gold-nanocluster-based fluorescent method could find applications in highly sensitive detection of melamine in real samples.

  5. Fluorescence quenching of graphene oxide combined with the site-specific cleavage of restriction endonuclease for deoxyribonucleic acid demethylase activity assay

    Energy Technology Data Exchange (ETDEWEB)

    Ji, Lijuan; Qian, Yingdan; Wu, Ping; Zhang, Hui; Cai, Chenxin, E-mail: cxcai@njnu.edu.cn

    2015-04-15

    Highlights: • An approach for sensitive and selective DNA demethylase activity assay is reported. • This assay is based on the fluorescence quenching of GO and site-specific cleavage of endonuclease. • It can determine as low as 0.05 ng mL{sup −1} of MBD2 with a linear range of 0.2–300 ng mL{sup −1}. • It has an ability to recognize MBD2 from other possibly coexisting proteins and cancer cell extracts. • It can avoid false signals, requiring no bisulfite conversion, PCR amplification, radioisotope-labeling. - Abstract: We report on the development of a sensitive and selective deoxyribonucleic acid (DNA) demethylase (using MBD2 as an example) activity assay by coupling the fluorescence quenching of graphene oxide (GO) with the site-specific cleavage of HpaII endonuclease to improve the selectivity. This approach was developed by designing a single-stranded probe (P1) that carries a binding region to facilitate the interaction with GO, which induces fluorescence quenching of the labeled fluorophore (FAM, 6-carboxyfluorescein), and a sensing region, which contains a hemi-methylated site of 5′-CmCGG-3′, to specifically recognize the target (T1, a 32-mer DNA from the promoter region of p53 gene) and hybridize with it to form a P1/T1 duplex. After demethylation with MBD2, the duplex can be specifically cleaved using HpaII, which releases the labeled FAM from the GO surface and results in the recovery of fluorescence. However, this cleavage is blocked by the hemi-methylation of this site. Thus, the magnitude of the recovered fluorescence signal is related to the MBD2 activity, which establishes the basis of the DNA demethylase activity assay. This assay can determine as low as ∼(0.05 ± 0.01) ng mL{sup −1} (at a signal/noise of 3) of MBD2 with a linear range of 0.2–300 ng mL{sup −1} and recognize MBD2 from other possibly coexisting proteins and cancer cell extracts. The advantage of this assay is its ability to avoid false signals and no

  6. Effects of Low Temperature Stress and INA Bacteria on Chlorophyll a Fluorescence Induction Kinetics in Young Fruit of Two Apricot Cultivars

    Institute of Scientific and Technical Information of China (English)

    YANG Jian-min; MENG Qing-rui; PENG Wei-xiu; WANG Xue-dong; ZHANG Yuan-hui; SUN Fu-zai; ZHAO Ting-chang; LI Shao-hua

    2002-01-01

    Effects of low temperature and INA bacteria on the change of chlorophyll a fluorescence inyoung fruit from two apricot cultivars were investigated. Low temperature decreased the potential activity(Fv/Fo) ,conversion efficiency of primary light energy (Fv/Fm)of PS Ⅱ and photochemical quenching (qP) inyoung fruit of two apricot cultivars. Low temperature enhanced non-photochemical quenching qN, decreasingthe quantum yield of photosynthetic electron transfer. The presence of ice nucleating active (INA) bacteria in-tensified the effects of low temperature, raised the injury temperature threshold from - 4℃ to - 2 - - 3℃.INA bacteria can be a factor to induce frost susceptibility of apricot fruit. The amount of damaged PS Ⅱ activi-ty center was related to apricot fruit size and cultivar.

  7. A novel method for ranitidine hydrochloride determination in aqueous solution based on fluorescence quenching of functionalised CdS QDs through photoinduced charge transfer process: spectroscopic approach.

    Science.gov (United States)

    Gore, Anil Hanumant; Mote, Umesh Shivaji; Tele, Shahaji Sopan; Anbhule, Prashant Vikramrao; Rath, Madhab Chandra; Patil, Shivajirao Raghunath; Kolekar, Govind Bhagwan

    2011-06-21

    A novel method for the quantitative determination of ranitidine hydrochloride (RNH) based on the fluorescence quenching of functionalised CdS quantum dots (QDs) by RNH in aqueous solution was proposed. The method is simple, rapid, specific and highly sensitive with good precision. The thioglycolic acid (TGA)-capped CdS QDs were synthesized from cadmium nitrate and sodium sulfide in alkaline solution. Under the optimal conditions, the Stern-Volmer calibration plot of F(0)/F against concentration of RNH was linear in the range of 0.50-15.0 μg mL(-1) with a correlation coefficient of 0.996. The limit of detection (LOD) was 0.38 μg mL(-1). The method was satisfactorily applied to the direct determination of RNH in pharmaceutical formulations with no significant interference from excipients. The results were found to be in good agreement with those obtained by the reference method and the claimed value. The accuracy and reliability of the method were further ascertained by recovery studies via the standard-addition method, with percentage recoveries in the range of 98.47 to 102.30%. The possible fluorescence quenching mechanism for the reaction was also discussed.

  8. A selective determination of copper ions in water samples based on the fluorescence quenching of thiol-capped CdTe quantum dots.

    Science.gov (United States)

    Nurerk, Piyaluk; Kanatharana, Proespichaya; Bunkoed, Opas

    2016-03-01

    CdTe quantum dots (QDs) capped with different stabilizers, i.e. thioglycolic acid (TGA), 3-mercaptopropionic acid (MPA) and glutathione (GSH) were investigated as fluorescent probes for the determination of Cu(2+). The stabilizer was shown to play an important role in both the sensitivity and selectivity for the determination of Cu(2+). TGA-capped CdTe QDs showed the highest sensitivity, followed by the MPA and GSH-capped CdTe QDs, respectively. The TGA- and MPA-capped CdTe QDs were not selective for Cu(2+) that was affected by Ag(+). The GSH-capped CdTe QDs were insensitive to Ag(+) and were used to determine Cu(2+) in water samples. Under optimal conditions, quenching of the fluorescence intensity (F0/F) increased linearly with the concentration of Cu(2+) over a range of 0.10-4.0 µg/mL and the detection limit was 0.06 µg/mL. The developed method was successfully applied to the determination of Cu(2+) in water samples. Good recoveries of 93-104%, with a relative standard deviation of < 6% demonstrated that the developed simple method was accurate and reliable. The quenching mechanisms were also described.

  9. Carbohydrate Bis-acetal-Based Substrates as Tunable Fluorescence-Quenched Probes for Monitoring exo-Glycosidase Activity.

    Science.gov (United States)

    Cecioni, Samy; Vocadlo, David J

    2017-06-28

    Tunable Förster resonance energy transfer (FRET)-quenched substrates are useful for monitoring the activity of various enzymes within their relevant physiological environments. Development of FRET-quenched substrates for exo-glycosidases, however, has been hindered by their constrained pocket-shaped active sites. Here we report the design of a new class of substrate that overcomes this problem. These Bis-Acetal-Based Substrates (BABS) bear a hemiacetal aglycon leaving group that tethers fluorochromes in close proximity, also positioning them distant from the active site pocket. Following cleavage of the glycosidic bond, the liberated hemiacetal spontaneously breaks down, leading to separation of the fluorophore and quencher. We detail the synthesis and characterization of GlcNAc-BABS, revealing a striking 99.9% quenching efficiency. These substrates are efficiently turned over by the human exo-glycosidase O-GlcNAcase (OGA). We find the hemiacetal leaving group rapidly breaks down, enabling quantitative monitoring of OGA activity. We expect this strategy to be broadly useful for the development of substrate probes for monitoring exo-glycosidases, as well as a range of other enzymes having constrained pocket-shaped active sites.

  10. Varietal differences in photosynthetic characters and chlorophyll fluorescence induction kinetics parameters among intergeneric progeny derived from Oryza×Sorghum, its parents, and hybrid rice

    Institute of Scientific and Technical Information of China (English)

    2002-01-01

    A comparative study on the photosynthetic parameters among intergeneric progenies derived from Oryza sativa L.×Sorghum vulgare L., its maternal parent Gui 630 and commercial 3-line hybrid rice Shanyou 63 in pot experiment in greenhouse was conducted. The morphological and photosynthetic characters of canopy leaves and chlorophyll fluorescence kinetic parameters including Fv/Fm, Fv/F0, photochemical quenching coefficient and non-photochemical coefficient of canopy leaves of 3 varieties were measured. The results showed the progeny, Yuanyou 1, derived from an intergeneric cross of rice and sorghum possesses better canopy spatial architecture with thicker, heavier and bigger canopy leaf than its maternal parent Gui 630. Higher photosynthetic rate due to higher chlorophyll content, higher primary energy transformation efficiency, potential of PSII and non-photochemical quenching coefficient (qE) were also measured in Yuanyou 1. These explain partly why the intergeneric progeny has higher biomass production, and better tolerance to adverse conditions and higher field yields even under stress conditions.

  11. Identification and quantification of carbamate pesticides in dried lime tree flowers by means of excitation-emission molecular fluorescence and parallel factor analysis when quenching effect exists.

    Science.gov (United States)

    Rubio, L; Ortiz, M C; Sarabia, L A

    2014-04-11

    A non-separative, fast and inexpensive spectrofluorimetric method based on the second order calibration of excitation-emission fluorescence matrices (EEMs) was proposed for the determination of carbaryl, carbendazim and 1-naphthol in dried lime tree flowers. The trilinearity property of three-way data was used to handle the intrinsic fluorescence of lime flowers and the difference in the fluorescence intensity of each analyte. It also made possible to identify unequivocally each analyte. Trilinearity of the data tensor guarantees the uniqueness of the solution obtained through parallel factor analysis (PARAFAC), so the factors of the decomposition match up with the analytes. In addition, an experimental procedure was proposed to identify, with three-way data, the quenching effect produced by the fluorophores of the lime flowers. This procedure also enabled the selection of the adequate dilution of the lime flowers extract to minimize the quenching effect so the three analytes can be quantified. Finally, the analytes were determined using the standard addition method for a calibration whose standards were chosen with a D-optimal design. The three analytes were unequivocally identified by the correlation between the pure spectra and the PARAFAC excitation and emission spectral loadings. The trueness was established by the accuracy line "calculated concentration versus added concentration" in all cases. Better decision limit values (CCα), in x0=0 with the probability of false positive fixed at 0.05, were obtained for the calibration performed in pure solvent: 2.97 μg L(-1) for 1-naphthol, 3.74 μg L(-1) for carbaryl and 23.25 μg L(-1) for carbendazim. The CCα values for the second calibration carried out in matrix were 1.61, 4.34 and 51.75 μg L(-1) respectively; while the values obtained considering only the pure samples as calibration set were: 2.65, 8.61 and 28.7 μg L(-1), respectively.

  12. Effect of carbon and nitrogen assimilation on chlorophyll fluorescence emission by the cyanobacterium Anacystis nidulans

    Energy Technology Data Exchange (ETDEWEB)

    Romero, J.M.; Lara, C. (Instituto de Bioquimica Vegetal y Fotosintesis, Univ. de Sevilla y CSIC, Sevilla (ES)); Sivak, M.N. (Dept. of Biochemistry, Michigan State Univ., East Lansing (US))

    1992-01-01

    O{sub 2} evolution and chlorophyll A fluorescence emission have been monitored in intact cells of the cyanobacterium Anacystis nidulans 1402-1 to study the influence of carbon and nitrogen assimilation on the operation of the photosynthetic apparatus. The pattern of fluorescence induction in dark-adapted cyanobacterial cells was different from that of higher plants. Cyanobacteria undergo large, rapid state transitions upon illumination, which lead to marked changes in the fluorescence yield, complicating the estimation of quenching coefficients. The Kautsky effect was not evident, although it could be masked by a state II-state I transition, upon illumination with actinic light. The use of inhibitors of carbon assimilation such as D,L-glyceraldehyde or iodoacetamide allowed us to relate changes in variable fluorescence to active CO{sub 2} fixation. Ammonium, but not nitrate, induced non-photochemical fluorescence quenching, in agreement with a previous report on green algae, indicative of an ammonium-induced state i transition. (au).

  13. Sensitive determination of enoxacin in pharmaceutical formulations by its quench effect on the fluorescence of glutathione-capped CdTe quantum dots.

    Science.gov (United States)

    Yang, Qiong; Tan, Xuanping; Yang, Jidong

    2016-02-01

    A sensitive and simple method for the determination of enoxacin (ENX) was developed based on the fluorescence quenching effect of ENX for glutathione (GSH)-capped CdTe quantum dots (QDs). Under optimum conditions, a good linear relationship was obtained from 4.333 × 10(-9)  mol⋅L(-1) to 1.4 × 10(-5)  mol⋅L(-1) with a correlation coefficient (R) of 0.9987, and the detection limit (3σ/K) was 1.313 × 10(-9)  mol⋅L(-1). The corresponding mechanism has been proposed on the basis of electron transfer supported by ultraviolet-visible (UV) light absorption, fluorescence spectroscopy, and the measurement of fluorescence lifetime. The method has been applied to the determination of ENX in pharmaceutical formulations (enoxacin gluconate injections and commercial tablets) with satisfactory results. The proposed method manifested several advantages such as high sensitivity, short analysis time, low cost and ease of operation. Copyright © 2015 John Wiley & Sons, Ltd.

  14. Fenton reaction-mediated fluorescence quenching of N-acetyl-L-cysteine-protected gold nanoclusters: analytical applications of hydrogen peroxide, glucose, and catalase detection.

    Science.gov (United States)

    Deng, Hao-Hua; Wu, Gang-Wei; He, Dong; Peng, Hua-Ping; Liu, Ai-Lin; Xia, Xing-Hua; Chen, Wei

    2015-11-21

    Given the importance of hydrogen peroxide (H2O2) in many biological processes and its wide application in various industries, the demand for sensitive, accurate, and economical H2O2 sensors is high. In this study, we used Fenton reaction-stimulated fluorescence quenching of N-acetyl-L-cysteine-protected gold nanoclusters (NAC-AuNCs) as a reporter system for the determination of H2O2. After the experimental conditions were optimized, the sensing platform enabled the analysis of H2O2 with a limit of detection (LOD) as low as 0.027 μM. As the glucose oxidase cascade leads to the generation of H2O2 and catalase catalyzes the decomposition of H2O2, these two biocatalytic procedures can be probed by the Fenton reaction-mediated quenching of NAC-AuNCs. The LOD for glucose was found to be 0.18 μM, and the linear range was 0.39-27.22 μM. The LOD for catalase was 0.002 U mL(-1), and the linear range was 0.01-0.3 U mL(-1). Moreover, the proposed sensing methods were successfully applied for human serum glucose detection and the non-invasive determination of catalase activity in human saliva, demonstrating their great potential for practical applications.

  15. Fluorescence Quenching Property of C-Phycocyanin from Spirulina platensis and its Binding Efficacy with Viable Cell Components.

    Science.gov (United States)

    Paswan, Meenakshi B; Chudasama, Meghna M; Mitra, Madhusree; Bhayani, Khushbu; George, Basil; Chatterjee, Shruti; Mishra, Sandhya

    2016-03-01

    Phycocyanin is a natural brilliant blue colored, fluorescent protein, which is commonly present in cyanobacteria. In this study, C-phycocyanin was extracted and purified from Spirulina platensis, which are multicellular and filamentous cyanobacteria of greater importance because of its various biological and pharmacological potential. It was analyzed for its binding affinity towards blood cells, algal cells, genomic DNA of microalgae, and bacteria at different temperature and incubation time. It showed good binding affinity with these components even at low concentration of 2.5 μM. The purpose of this study was to evaluate the applicability of C-phycocyanin as a green fluorescent dye substituting carcinogenic chemical dyes.

  16. Secondary and tertiary structure changes of reconstituted LmrA induced by nucleotide binding or hydrolysis - A Fourier transform attenuated total reflection infrared spectroscopy and tryptophan fluorescence quenching analysis

    NARCIS (Netherlands)

    Vigano, C; Margolles, A; van Veen, HW; Konings, WN; Ruysschaert, JM

    2000-01-01

    LmrA, a membrane protein of Lactococcus lactis, extrudes amphiphilic compounds from the inner leaflet of the cytoplasmic membrane, using energy derived from ATP hydrolysis. A combination of total reflection Fourier transform infrared spectroscopy, H-2/H exchange, and fluorescence quenching

  17. Fluorescence studies by quenching and protein unfolding on the interaction of bioactive compounds in water extracts of kiwi fruit cultivars with human serum albumin

    Energy Technology Data Exchange (ETDEWEB)

    Seo Park, Yong, E-mail: ypark@mokpo.ac.kr [Department of Horticultural Science, Mokpo National University, Muan, Jeonnam (Korea, Republic of); Polovka, Martin [National Agricultural and Food Centre VUP, Food Research Institute, SK-824 75 Bratislava (Slovakia); Leticia Martinez-Ayala, Alma [Centro de Desarrollo de Productos Bioticos, Instituto Politécnico Nacional, Carretera Yautepec-Jojutla, Km. 6, calle CEPROBI No. 8, Col. San Isidro, Yautepec, Morelos 62731 (Mexico); González-Aguilar, Gustavo A. [Research Center for Food & Development, A.C. (CIAD), Carretera a Ejido La Victoria, Km 0.6, Hermosillo, Sonora 83304 (Mexico); Ham, Kyung-Sik; Kang, Seong-Gook; Park, Yang-Kyun [Department of Food Engineering, Mokpo National University, Muan, Jeonnam (Korea, Republic of); Heo, Buk-Gu [Naju Foundation of Natural Dyeing Culture, Naju 520-931 (Korea, Republic of); Namiesnik, Jacek [Department of Analytical Chemistry, Chemical Faculty, Gdańsk University of Technology, 80 952 Gdańsk (Poland); Gorinstein, Shela, E-mail: shela.gorin@mail.huji.ac.il [The Institute for Drug Research, School of Pharmacy, The Hebrew University, Hadassah Medical School, Jerusalem 91120 (Israel)

    2015-04-15

    were studied by spectroscopic methods. • 3D fluorescence was used to study the interactions between fruit polyphenols and HSA. • Polyphenols have a strong ability to quench the intrinsic fluorescence of HSA by forming complexes. • Fluorescence can be used as a tool for determination of similarity and differences of fruits.

  18. Chemical bonding of chlorophylls and plant aminic axial ligands impact harvesting of visible light and quenching of fluorescence.

    Science.gov (United States)

    Ioannidis, Nikolaos E; Tsiavos, Theodoros; Kotzabasis, Kiriakos

    2012-01-01

    In the present work, we tested the mode of interaction of all three polyamines (putrescine, spermidine and spermine) with chlorophyll a and b, as well as pheophytin a and b. The results showed that all three polyamines bind to the Mg ion of chlorophyll ring as probed by Raman spectroscopy. The coordination of spermine with Chl b has the most interesting features from all pigments tested. Spermine induces reversible increases and decreases of the fluorescence yield of Chl b at about 661 nm. Interestingly, equilibrium between a high-fluorescence yield conformation and a low yield is feasible by the interaction of chlorophyll b and aminic ligands. Furthermore, absorption data for the diagnostic regions of 518 and 535 nm are provided for all combinations of pigments and ligands. The significance and consistence of these results with respect to photochemical and bioenergetic principles are discussed.

  19. Optical sensor based on fluorescent quenching and pulsed blue LED excitation for long-term monitoring of dissolved oxygen in NASA space bioreactors.

    Science.gov (United States)

    Gao, Frank G; Fay, James M; Mathew, Grace; Jeevarajan, Antony S; Anderson, Melody M

    2005-01-01

    There is a need to monitor the concentration of dissolved oxygen (DO) present in the culture medium for NASA's space cell biology experiments, as well as in earth-based cell cultures. Continuous measurement of DO concentration in the cell culture medium in perfused bioreactors requires that the oxygen sensor provide adequate sensitivity and low toxicity to the cells, as well as maintain calibration over several weeks. Although there are a number of sensors for dissolved oxygen on the market and under development elsewhere, very few meet these stringent conditions. An in-house optical oxygen sensor (HOXY) based on dynamic fluorescent quenching of Tris(4,7-diphenyl-1,10-phenanthroline)ruthenium(II) chloride and a pulsed blue LED light source was developed in our laboratory to address these requirements. The sensing element consisted of the fluorescent dye embedded in a silicone matrix and coated onto a glass capillary. Photobleaching was minimized by a pulsed LED light source. The total noise in the sensor output is 2% and the sensor dynamic range is 0 to 200 mm Hg. The resolution of the sensor is 0.1 mm Hg at 50 mm Hg, and 0.25 mm Hg at 130 mm Hg, while the accuracy is 5%. The LED-based oxygen sensor exhibited stable performance and low drift, making it compatible for space-flight bioreactor systems.

  20. A Simple Fluorescence Quenching Method for the Determination of Vanillin Using TGA-capped CdTe/ZnS Nanoparticles as Probes.

    Science.gov (United States)

    Li, Li; Zhang, Qiaolin; Ding, Yaping; Lu, Yaxiang; Cai, Xiaoyong; Yu, Lurong

    2015-07-01

    Based on the quenching of the fluorescence intensity of thioglycolic acid (TGA)-capped core-shell CdTe/ZnS nanoparticles (NPs) by vanillin, a novel, simple and rapid method for the determination of vanillin was proposed. In aqueous medium, the functionalized core-shell CdTe/ZnS NPs were successfully synthesized with TGA as the capping ligand. TGA-capped core-shell CdTe/ZnS NPs were characterized by using X-ray diffraction (XRD), transmission electron microscopy (TEM) and Fourier transform infrared (FTIR) spectroscopy. Factors affecting the vanillin detection were investigated, and the optimum conditions were also determined. Under the optimum conditions, the relative fluorescence intensity of CdTe/ZnS NPs was linearly proportional to vanillin over a concentration range from 9.4 × 10(-7) to 5.2 × 10(-4) M with a correlation coefficient of 0.998 and a detection limit of 2.6 × 10(-7) M. The proposed method was also employed to detect trace vanillin in cookies with satisfactory results.

  1. The interrelationship between the lower oxygen limit, chlorophyll fluorescence and the xanthophyll cycle in plants.

    Science.gov (United States)

    Wright, A Harrison; DeLong, John M; Gunawardena, Arunika H L A N; Prange, Robert K

    2011-03-01

    The lower oxygen limit (LOL) in plants may be identified through the measure of respiratory gases [i.e. the anaerobic compensation point (ACP) or the respiratory quotient breakpoint (RQB)], but recent work shows it may also be identified by a sudden rise in dark minimum fluorescence (F(o)). The interrelationship between aerobic respiration and fermentative metabolism, which occur in the mitochondria and cytosol, respectively, and fluorescence, which emanates from the chloroplasts, is not well documented in the literature. Using spinach (Spinacia oleracea), this study showed that F(o) and photochemical quenching (q(P)) remained relatively unchanged until O(2) levels dropped below the LOL. An over-reduction of the plastoquinone (PQ) pool is believed to increase F(o) under dark + anoxic conditions. It is proposed that excess cytosolic reductant due to inhibition of the mitochondria's cytochrome oxidase under low-O(2), may be the primary reductant source. The maximum fluorescence (F(m)) is largely unaffected by low-O(2) in the dark, but was severely quenched, mirroring changes to the xanthophyll de-epoxidation state (DEPS), under even low-intensity light (≈4 μmol m(-2) s(-1)). In low light, the low-O(2)-induced increase in F(o) was also quenched, likely by non-photochemical and photochemical means. The degree of quenching in the light was negatively correlated with the level of ethanol fermentation in the dark. A discussion detailing the possible roles of cyclic electron flow, the xanthophyll cycle, chlororespiration and a pathway we termed 'chlorofermentation' were used to interpret fluorescence phenomena of both spinach and apple (Malus domestica) over a range of atmospheric conditions under both dark and low-light.

  2. Fluorescence quenching of CdTe quantum dots by gardenoside%栀子甙对碲化镉量子点的荧光淬灭作用

    Institute of Scientific and Technical Information of China (English)

    张浩; 王芳; 马静; 卞伟

    2015-01-01

    CdTe quantum dots were synthesized in aqueous solution with 3‐mercaptopropionic acid as the stabilizer .The fluorescence quenching of 3‐mercaptopropionic acid stabilized CdTe quantum dots by gardenoside was investigated with fluorescence spectrometry .The effects of concentration of quan‐tum dots ,pH of buffer solution ,and reaction time on the fluorescence intensity of gardenoside/CdTe quantum dots system were examined .The optimum condition for the determination of gardenoside was established ,and the possible reaction mechanisms between gardenoside and as‐prepared CdTe quan‐tum dots were primarily studied .Results indicate that ,under the optimal experimental conditions ,the relative fluorescence intensity decreases linearly with the gardenoside concentration in the range of 2 × 10 - 7 -4 × 10 - 6 mol/L ,while the detection limit and relative standard deviation are 1 .4 × 10 - 7 mol/L and 0 .355% ,respectively .Moreover ,common metal cations ,sugars and amino acids have almost no apparent effect on the determination of gardenoside .In one word ,the present route can be readily used for the determination of gardenoside in the body fluid of human ;and the interaction between gardeno‐side and CdTe quantum dots is possibly dominated by dynamic quenching process .%以3‐巯基丙酸作为稳定剂,在水溶液中合成了 CdTe 量子点;采用荧光光谱法初步研究了栀子甙对巯基丙酸稳定的 CdTe 量子点的荧光淬灭作用,考察了量子点浓度、pH 、反应时间等多种因素对量子点‐栀子甙体系荧光强度的影响,确定了测定栀子甙的最佳实验条件;并初步探讨了栀子甙与该量子点相互作用的可能反应机理.结果表明,在最佳实验条件下,巯基丙酸稳定的 CdTe 量子点对栀子甙检测的线性范围为2×10-7~4×10-6 mol/L ,检出限为1.4×10-7 mol/L ,相对标准偏差为0.355%;且常见的金属阳离子、糖类和氨基酸对栀

  3. NeutrAvidin Functionalization of CdSe/CdS Quantum Nanorods and Quantification of Biotin Binding Sites using Biotin-4-Fluorescein Fluorescence Quenching.

    Science.gov (United States)

    Lippert, Lisa G; Hallock, Jeffrey T; Dadosh, Tali; Diroll, Benjamin T; Murray, Christopher B; Goldman, Yale E

    2016-03-16

    We developed methods to solubilize, coat, and functionalize with NeutrAvidin elongated semiconductor nanocrystals (quantum nanorods, QRs) for use in single molecule polarized fluorescence microscopy. Three different ligands were compared with regard to efficacy for attaching NeutrAvidin using the "zero-length cross-linker" 1-ethyl-3-[3-(dimethylamino)propyl]carbodiimide (EDC). Biotin-4-fluorescene (B4F), a fluorophore that is quenched when bound to avidin proteins, was used to quantify biotin binding activity of the NeutrAvidin coated QRs and biotin binding activity of commercially available streptavidin coated quantum dots (QDs). All three coating methods produced QRs with NeutrAvidin coating density comparable to the streptavidin coating density of the commercially available quantum dots (QDs) in the B4F assay. One type of QD available from the supplier (ITK QDs) exhibited ∼5-fold higher streptavidin surface density compared to our QRs, whereas the other type of QD (PEG QDs) had 5-fold lower density. The number of streptavidins per QD increased from ∼7 streptavidin tetramers for the smallest QDs emitting fluorescence at 525 nm (QD525) to ∼20 tetramers for larger, longer wavelength QDs (QD655, QD705, and QD800). QRs coated with NeutrAvidin using mercaptoundecanoicacid (MUA) and QDs coated with streptavidin bound to biotinylated cytoplasmic dynein in single molecule TIRF microscopy assays, whereas Poly(maleic anhydride-alt-1-ocatdecene) (PMAOD) or glutathione (GSH) QRs did not bind cytoplasmic dynein. The coating methods require optimization of conditions and concentrations to balance between substantial NeutrAvidin binding vs tendency of QRs to aggregate and degrade over time.

  4. Ternary mixtures of alkyltriphenylphosphonium bromides (C12TPB, C14TPB and C16TPB) in aqueous medium: their interfacial, bulk and fluorescence quenching behaviour

    Indian Academy of Sciences (India)

    Gargi Basu Ray; Soumen Ghosh; Satya P Moulik

    2010-03-01

    The self-aggregation behaviour of ternary mixtures of alkyl (C$_{12}^{-}$, C$_{14}^{-}$ and C$_{16}^{-}$) triphenylphosphonium bromides was studied by conductometry and tensiometry. The pure surfactants showed two Critical Micellar Concentrations (CMCs) by conductometry, but their ternary mixtures produce single CMC both by conductometry and tensiometry. The CMC values determined were found to be lower than that obtained from Clint equation suggesting synergistic interaction among the monomers within the micelles. Their bulk properties, like fraction of counterions bound to the micelles and free energy of micellization were evaluated. Interfacial parameters, like surface excess, minimum head group area of monomer and free energy of adsorption were also assessed. Interfacial adsorption was found to be more spontaneous than micellization. The head group area per monomer in ternary systems was larger than pure systems due to stronger electrostatic repulsion among the charged head groups. The values of the packing parameters supported the pure as well as ternary micelles to be spherical. The TPB surfactants efficiently quenched pyrene fluorescence; the performances of the homologues in this respect were assessed.

  5. Preconcentration determination of arsenic species by sorption of As(V) on Amberlite IRA-410 coupled with fluorescence quenching of L-cysteine capped CdS nanoparticles.

    Science.gov (United States)

    Hosseini, Mohammad Saeid; Nazemi, Sahar

    2013-10-07

    A simple and accurate method for arsenic speciation analysis in natural and drinking water samples is described in which preconcentration of arsenic as As(V) was coupled with spectrofluorometric determination. The extracted As(V) species with a column containing Amberlite IRA-410 were subjected to L-cysteine capped CdS quantum dots (QDs) and the fluorescence quenching of the QDs due to reduction of As(V) by L-cysteine was considered as a signal relevant to As(V) concentration. The As(III) species were also determined after oxidation of As(III) ions to As(V) with H2O2 and measurement of the total arsenic content. In treatment with 400 mL portions of water samples containing 30 μg L(-1) As(V), the relative standard deviation was 2.8%. The detection limit of arsenic was also found to be 0.75 μg L(-1) (1 × 10(-8) M). The reliability of proposed method was confirmed using certified reference materials. The trace amounts of arsenic species were then determined in different water samples, satisfactorily.

  6. Disruption of the ndhF1 gene affects Chl fluorescence through state transition in the Cyanobacterium Synechocystis sp. PCC 6803, resulting in apparent high efficiency of photosynthesis.

    Science.gov (United States)

    Ogawa, Takako; Harada, Tetsuyuki; Ozaki, Hiroshi; Sonoike, Kintake

    2013-07-01

    In Synechocystis sp. PCC 6803, the disruption of the ndhF1 gene (slr0844), which encodes a subunit of one of the NDH-1 complexes (NDH-1L complex) serving for respiratory electron transfer, causes the largest change in Chl fluorescence induction kinetics among the kinetics of 750 disruptants searched in the Fluorome, the cyanobacterial Chl fluorescence database. The cause of the explicit phenotype of the ndhF1 disruptant was examined by measurements of the photosynthetic rate, Chl fluorescence and state transition. The results demonstrate that the defects in respiratory electron transfer obviously have great impact on Chl fluorescence in cyanobacteria. The inactivation of NDH-1L complexes involving electron transfer from NDH-1 to plastoquinone (PQ) would result in the oxidation of the PQ pool, leading to the transition to State 1, where the yield of Chl fluorescence is high. Apparently, respiration, although its rate is far lower than that of photosynthesis, could affect Chl fluorescence through the state transition as leverage. The disruption of the ndhF1 gene caused lower oxygen-evolving activity but the estimated electron transport rate from Chl fluorescence measurements was faster in the mutant than in the wild-type cells. The discrepancy could be ascribed to the decreased level of non-photochemical quenching due to state transition. One must be cautious when using the Chl fluorescence parameter to estimate photosynthesis in mutants defective in state transition.

  7. Nonphotochemical quenching of excitation energy in photosystem II. A picosecond time-resolved study of the low yield of chlorophyll a fluorescence induced by single-turnover flash in isolated spinach thylakoids.

    Science.gov (United States)

    Vasil'ev, S; Bruce, D

    1998-08-04

    Chlorophyll a fluorescence emission is widely used as a noninvasive measure of a number of parameters related to photosynthetic efficiency in oxygenic photosynthetic organisms. The most important component for the estimation of photochemistry is the relative increase in fluorescence yield between dark-adapted samples which have a maximal capacity for photochemistry and a minimal fluorescence yield (F0) and light-saturated samples where photochemistry is saturated and fluorescence yield is maximal (Fm). However, when photosynthesis is saturated with a short (less than 50 micro(s)) flash of light, which induces only one photochemical turnover of photosystem II, the maximal fluorescence yield is significantly lower (Fsat) than when saturation is achieved with a millisecond duration multiturnover flash (Fm). To investigate the origins of the difference in fluorescence yield between these two conditions, our time-resolved fluorescence apparatus was modified to allow collection of picosecond time-resolved decay kinetics over a short time window immediately following a saturating single-turnover flash (Fsat) as well as after a multiturnover saturating pulse (Fm). Our data were analyzed with a global kinetic model based on an exciton radical pair equilibrium model for photosystem II. The difference between Fm and Fsat was modeled well by changing only the rate constant for quenching of excitation energy in the antenna of photosystem II. An antenna-based origin for the quenching was verified experimentally by the observation that addition of the antenna quencher 5-hydroxy-1,4-naphthoquinone to thylakoids under Fm conditions resulted in decay kinetics and modeled kinetic parameters very similar to those observed under Fsat conditions in the absence of added quinone. Our data strongly support the origin of low fluorescence yield at Fsat to be an antenna-based nonphotochemical quenching of excitation energy in photosystem II which has not usually been considered explicitly in

  8. Ultrafast fluorescence quenching dynamics of Atto655 in the presence of N-acetyltyrosine and N-acetyltryptophan in aqueous solution: proton-coupled electron transfer versus electron transfer.

    Science.gov (United States)

    Zhang, Ying; Yuan, Shuwei; Lu, Rong; Yu, Anchi

    2013-06-20

    We studied the ultrafast fluorescence quenching dynamics of Atto655 in the presence of N-acetyltyrosine (AcTyr) and N-acetyltryptophan (AcTrp) in aqueous solution with femtosecond transient absorption spectroscopy. We found that the charge-transfer rate between Atto655 and AcTyr is about 240 times smaller than that between Atto655 and AcTrp. The pH value and D2O dependences of the excited-state decay kinetics of Atto655 in the presence of AcTyr and AcTrp reveal that the quenching of Atto655 fluorescence by AcTyr in aqueous solution is via a proton-coupled electron-transfer (PCET) process and that the quenching of Atto655 fluorescence by AcTrp in aqueous solution is via an electron-transfer process. With the version of the semiclassical Marcus ET theory, we derived that the electronic coupling constant for the PCET reaction between Atto655 and AcTyr in aqueous solution is 8.3 cm(-1), indicating that the PCET reaction between Atto655 and AcTyr in aqueous solution is nonadiabatic.

  9. Cu2+对碳点的荧光猝灭机理研究%Study of the Mechanism of Quenching Effect of Cu2+ on Fluorescent Carbon Dots

    Institute of Scientific and Technical Information of China (English)

    王杰; 毛小娇; 郑鹄志; 隆异娟

    2015-01-01

    在pH=5.8的Britton-Robinsion(B-R)缓冲溶液中 ,Cu2+ 可有效猝灭 O ,O'-2(3-氨丙基)聚乙二醇1500 (PEG1500N )钝化的碳点荧光 .通过对猝灭机理的研究得出Cu2+对碳点荧光的猝灭是静态猝灭过程 .加入Cu2+ 后 ,碳点的荧光强度和紫外吸收都明显减弱 ,且温度越高猝灭越弱 ,但荧光寿命没有变化 .另外 ,猝灭速率常数 Kq=1013 L/(mol · s)也比典型的溶液中扩散控制猝灭速率常数的上限值高很多 ,这些都证明该过程是静态猝灭过程 .猝灭常数为9.0 × 104 L/mol ,Cu2+与碳点的结合比为6:1 .%We found in a previous study that fluorescence of PEG 1500N-passivated carbon dots (C-Dots ) could be quenched effectively by copper ions (Cu2+ ) in pH 5.8 Britton-Robinsion (B-R) buffer solution .In the present study ,the quenching mechanism was discussed and a static quenching process was supposed .A significant decrease in UV absorption and fluorescent intensity were found after Cu2+ addition .A smaller amount of quenching was also found at higher temperature .But no change in fluorescence lifetime was de-tected .Additionally ,the Kq value of 1013 L/(mol · s) was larger than the upper limit of typical diffusion-controlled quenching in solution .All of the above results confirmed the view of static quenching .The quenching constant was 9.0 × 104 L/mol ,and the binding ratio of Cu2+ to C-Dots was 6:1 .

  10. Molecular insights into Zeaxanthin-dependent quenching in higher plants

    Science.gov (United States)

    Xu, Pengqi; Tian, Lijin; Kloz, Miroslav; Croce, Roberta

    2015-01-01

    Photosynthetic organisms protect themselves from high-light stress by dissipating excess absorbed energy as heat in a process called non-photochemical quenching (NPQ). Zeaxanthin is essential for the full development of NPQ, but its role remains debated. The main discussion revolves around two points: where does zeaxanthin bind and does it quench? To answer these questions we have followed the zeaxanthin-dependent quenching from leaves to individual complexes, including supercomplexes. We show that small amounts of zeaxanthin are associated with the complexes, but in contrast to what is generally believed, zeaxanthin binding per se does not cause conformational changes in the complexes and does not induce quenching, not even at low pH. We show that in NPQ conditions zeaxanthin does not exchange for violaxanthin in the internal binding sites of the antennas but is located at the periphery of the complexes. These results together with the observation that the zeaxanthin-dependent quenching is active in isolated membranes, but not in functional supercomplexes, suggests that zeaxanthin is acting in between the complexes, helping to create/participating in a variety of quenching sites. This can explain why none of the antennas appears to be essential for NPQ and the multiple quenching mechanisms that have been observed in plants. PMID:26323786

  11. Kinetic characterization of factor Xa binding using a quenched fluorescent substrate based on the reactive site of factor Xa inhibitor from Bauhinia ungulata seeds.

    Science.gov (United States)

    Oliva, M L V; Andrade, S A; Juliano, M A; Sallai, R C; Torquato, R J; Sampaio, M U; Pott, V J; Sampaio, C A M

    2003-07-01

    The specific Kunitz Bauhinia ungulata factor Xa inhibitor (BuXI) and the Bauhinia variegata trypsin inhibitor (BvTI) blocked the activity of trypsin, chymotrypsin, plasmin, plasma kallikrein and factor XIIa, and factor Xa inhibition was achieved only by BuXI (K(i) 14 nM). BuXI and BvTI are highly homologous (70%). The major differences are the methionine residues at BuXI reactive site, which are involved in the inhibition, since the oxidized protein no longer inhibits factor Xa but maintains the trypsin inhibition. Quenched fluorescent substrates based on the reactive site sequence of the inhibitors were synthesized and the kinetic parameters of the hydrolysis were determined using factor Xa and trypsin. The catalytic efficiency k(cat)/K(m) 4.3 x 10(7) M(-1)sec(>-1) for Abz-VMIAALPRTMFIQ-EDDnp (lead peptide) hydrolysis by factor Xa was 10(4)-fold higher than that of Boc-Ile-Glu-Gly-Arg-AMC, widely used as factor Xa substrate. Lengthening of the substrate changed its susceptibility to factor Xa hydrolysis. Both methionine residues in the substrate influence the binding to factor Xa. Serine replacement of threonine (P(1)') decreases the catalytic efficiency by four orders of magnitude. Factor Xa did not hydrolyze the substrate containing the reactive site sequence of BvTI, that inhibits trypsin inhibitor but not factor Xa. Abz-VMIAALPRTMFIQ-EDDnp prolonged both the prothrombin time and the activated partial thromboplastin time, and the other modified substrates used in this experiment altered blood-clotting assays.

  12. Synthesis of 4‧-substituted-2,2‧;6‧,2″-terpyridine Ru(II) complexes electrochemical, fluorescence quenching and antibacterial studies

    Science.gov (United States)

    Ezhilarasu, Tamilarasu; Sathiyaseelan, Anbazhagan; Kalaichelvan, Pudupalayam Thangavelu; Balasubramanian, Sengottuvelan

    2017-04-01

    Three new Ru(II) terpyridine complexes viz. [Ru(BBtpy)2](PF6)2 [Ru(L1)] (BBtpy = 4‧-(4-benzyloxybenzaldehyde)-2,2‧:6‧,2″-terpyridine), [Ru(BMBtpy)2](PF6)2 [Ru(L2)] (BMBtpy = 4‧-(4-benzyloxy-3-methoxybenzaldehyde)-2,2‧:6‧,2″-terpyridine) and [Ru(BEBtpy)2](PF6)2 [Ru(L3)] (BEBtpy = 4‧-(4-benzyloxy-3-ethoxybenzaldehyde)-2,2‧:6‧,2″-terpyridine) have been synthesized and characterized. The MALDI-TOF/MS fragmentation pattern of [Ru(BMBtpy)2](PF6)2 complex exhibits a molecular ion peak at m/z = 987.09 [M-2PF6]2+ fragment. These Ru(II) complexes are redox active, show both metal centered oxidation and ligand centered reduction processes. The peak potential and peak current Ipa and Ipc also undergo definite shift and increase with increase in the scan rate (20-120 mV/s). The fluorescence of Ru(II) complexes [Ru(L1)], [Ru(L2)] and [Ru(L3)] are effectively quenched by 1,4-benzoquinone and 1,4-naphthoquinone in acetonitrile. The antibacterial activity of ruthenium(II) complexes were screened against four human pathogens both gram-positive bacteria (Bacillus subtilis, Staphylococcus aureus) and gram negative bacteria (Escherichia coli, Klebsiella pneumonia) by the well diffusion method. The antibacterial activity of Ru(II) complexes is comparable to that of standard antibiotics like tetracycline.

  13. Lutein from Deepoxidation of Lutein Epoxide Replaces Zeaxanthin to Sustain an Enhanced Capacity for Nonphotochemical Chlorophyll Fluorescence Quenching in Avocado Shade Leaves in the Dark1

    Science.gov (United States)

    Förster, Britta; Pogson, Barry James; Osmond, Charles Barry

    2011-01-01

    Leaves of avocado (Persea americana) that develop and persist in deep shade canopies have very low rates of photosynthesis but contain high concentrations of lutein epoxide (Lx) that are partially deepoxidized to lutein (L) after 1 h of exposure to 120 to 350 μmol photons m−2 s−1, increasing the total L pool by 5% to 10% (ΔL). Deepoxidation of Lx to L was near stoichiometric and similar in kinetics to deepoxidation of violaxanthin (V) to antheraxanthin (A) and zeaxanthin (Z). Although the V pool was restored by epoxidation of A and Z overnight, the Lx pool was not. Depending on leaf age and pretreatment, the pool of ΔL persisted for up to 72 h in the dark. Metabolism of ΔL did not involve epoxidation to Lx. These contrasting kinetics enabled us to differentiate three states of the capacity for nonphotochemical chlorophyll fluorescence quenching (NPQ) in attached and detached leaves: ΔpH dependent (NPQΔpH) before deepoxidation; after deepoxidation in the presence of ΔL, A, and Z (NPQΔLAZ); and after epoxidation of A+Z but with residual ΔL (NPQΔL). The capacity of both NPQΔLAZ and NPQΔL was similar and 45% larger than NPQΔpH, but dark relaxation of NPQΔLAZ was slower. The enhanced capacity for NPQ was lost after metabolism of ΔL. The near equivalence of NPQΔLAZ and NPQΔL provides compelling evidence that the small dynamic pool ΔL replaces A+Z in avocado to “lock in” enhanced NPQ. The results are discussed in relation to data obtained with other Lx-rich species and in mutants of Arabidopsis (Arabidopsis thaliana) with increased L pools. PMID:21427278

  14. A highly sensitive fluorescence quenching method for perphenazine detection based on its catalysis of K{sub 2}S{sub 2}O{sub 8} oxidizing rhodamine 6G

    Energy Technology Data Exchange (ETDEWEB)

    Zhang, Lihong; Huang, Qitong; Lin, Changqing [Department of Food and Biological Engineering, Zhangzhou Institute of Technology, Zhangzhou, 363000 (China); Lin, Xiaofeng [College of Chemistry and Environment, Minnan Normal University, Zhangzhou, 363000 (China); Huang, Yiqun [Zhangzhou Affiliated Hospital of Fujian Medical University, Zhangzhou 363000 (China); Liu, Jiaming, E-mail: mnsdljm@163.com [College of Chemistry and Environment, Minnan Normal University, Zhangzhou, 363000 (China); Ma, Xudong, E-mail: maxudong005@hotmail.com [Zhangzhou Affiliated Hospital of Fujian Medical University, Zhangzhou 363000 (China)

    2014-12-15

    In this paper, the fluorescence spectra of Rhod 6G (rhodamine 6G)–K{sub 2}S{sub 2}O{sub 8}–PPH (perphenazine) were studied. We found that Rhod 6G existed in the form of Rhod 6G{sup +} under the conditions of 60 °C, 10 min and pH 5.42, and Rhod 6G{sup +} can emit strong and stable fluorescence. Further study showed that when PPH and Rhod 6G{sup +} coexisted, the ester exchange reaction carried out between -OH of PPH and -COOC{sub 2}H{sub 5} of Rhod 6G{sup +} to produced Rhod 6G{sup +}–PPH compound. More interestingly, K{sub 2}S{sub 2}O{sub 8} could oxidize Rhod 6G{sup +} and quench its RTP signal, while PPH was oxidized to red compound PPH′ by K{sub 2}S{sub 2}O{sub 8}, and Rhod 6G{sup +}–PPH′ and PPH were produced in the ester exchange reaction between the -OH of PPH′ and the -COOC{sub 2}H{sub 5} of Rhod 6G{sup +}–PPH. In the above process, PPH catalyzed K{sub 2}S{sub 2}O{sub 8} oxidizing Rhod 6G, which caused the fluorescence signal of the system to quench sharply. Hence, a catalytic fluorescence quenching method for the determination of residual PPH has been developed based on the its catalyzing K{sub 2}S{sub 2}O{sub 8} oxidize rhodamine 6G. This sensitive, accurate, simple and selective fluorescence quenching method was used to determine residual PPH in biological samples with the results consisting with those obtained by high performance liquid chromatography (HPLC), showing good accuracy. The structures of Rhod 6G{sup +}, PPH and Rhod 6G{sup +}–PPH were characterized by infrared spectra. The reaction mechanism of the determination of PPH was also discussed. - Highlights: • Fluorescence for the determination of perphenazine (PPH) had been established. • This method had high sensitivity (limit of detection was 3.3×10{sup −14} g mL{sup −1}). • This method had been applied to determination of PPH in biological samples. • Structures of Rhod 6G{sup +}, PPH and Rhod 6G{sup +}–PPH were characterized by infrared spectra. • Mechanism

  15. Light harvesting and Blue-Green light induced non-photochemical quenching in two different C-phycocyanin mutants of synechocytis PCC 6803

    NARCIS (Netherlands)

    Tian, L.; Stokkum, van I.H.M.; Koehorst, R.B.M.; Amerongen, van H.

    2013-01-01

    Cyanobacteria are oxygen-evolving photosynthetic organisms that harvest sunlight and convert excitation energy into chemical energy. Most of the light is absorbed by large light harvesting complexes called phycobilisomes (PBs). In high-light conditions, cyanobacteria switch on a photoprotective mech

  16. The Use of Chlorophyll Fluorescence Lifetime to Assess Phytoplankton Physiology within a River-Dominated Environment

    Science.gov (United States)

    Hall, Callie M.; Miller, Richard L.; Redalje, Donald G.; Fernandez, Salvador M.

    2002-01-01

    Chlorophyll a fluorescence lifetime was measured for phytoplankton populations inhabiting the three physical zones surrounding the Mississippi River's terminus in the Gulf of Mexico. Observations of river discharge volume, nitrate + nitrite, silicate, phosphate, PAR (Photosynthetically Active Radiation) diffuse attenuation within the water column, salinity, temperature, SPM, and chl a concentration were used to characterize the distribution of chl fluorescence lifetime within a given region within restricted periods of time. 33 stations extending from the Mississippi River plume to the shelf break of the Louisiana coast were surveyed for analysis of chlorophyll fluorescence lifetime during two cruises conducted March 31 - April 6, 2000, and October 24 - November 1, 2000. At each station, two to three depths were chosen for fluorescence lifetime measurement to represent the vertical characteristics of the water column. Where possible, samples were taken from just below the surface and from just above and below the pycnocline. All samples collected were within the 1% light level of the water column (the euphotic zone). Upon collection, samples were transferred to amber Nalgene bottles and left in the dark for at least 15 minutes to reduce the effects of non-photochemical quenching and to insure that photosynthetic reaction centers were open. Before measurements within the phase fluorometer were begun, the instrument was allowed to warm up for no less than one hour.

  17. Photosystem II antennae are not energetically connected: evidence based on flash-induced O2 evolution and chlorophyll fluorescence in sunflower leaves.

    Science.gov (United States)

    Oja, Vello; Laisk, Agu

    2012-10-01

    Oxygen evolution was measured in sunflower leaves in steady-state and during multiple-turnover pulses (MTP) of different light (630 nm LED plus far-red light) intensity and duration. In parallel, Chl fluorescence yields F(0) (minimum), F(s) (steady-state), and F(m) (pulse-saturated), as well as fluorescence induction during MTPs were recorded. Extra O(2) evolution was measured in response to a saturating single-turnover Xe flash (STF) applied immediately subsequently to the actinic light in the steady-state and to each MTP. Under the used anaerobic conditions and randomized S-states electron transport per STF was calculated as 4O(2) evolution. The STF-induced electron transport (=the number of open PSII) was maximal at the low background light, but decreased with progressing light saturation in steady-state and with the increasing duration of MTP. The quantum yield (effective antenna size) of open PSII centers remained constant when adjacent centers became closed. The photochemical quenching of fluorescence q(P) = (F(m) - F(s))/(F(m) - F(0)) was proportional with the portion of open PSII centers in the steady-state (variable non-photochemical quenching, NPQ) and with increasing MTP duration (NPQ absent). Comparison of experimental responses to a model based on PSII dimers with well-connected antennae showed no energetic connectivity between PSII antennae in intact leaves, suggesting that in vivo PSII exist as monomers, or dimers with energetically disconnected antennae.

  18. Effects of Nitrogen Fertilizer Level on Chlorophyll Fluorescence Characteristics in Flag Leaf of Super Hybrid Rice at Late Growth Stage

    Institute of Scientific and Technical Information of China (English)

    LONG Ji-rui; MA Guo-hui; WAN Yi-zheng; SONG Chun-fang; SUN Jian; QIN Rui-jun

    2013-01-01

    To compare the effects of slow-release nitrogen fertilizer at six different levels on the flag leaf chlorophyll fluorescence characteristics of super hybrid rice,a field fertilization experiment was conducted with super hybrid rice Y Liangyou 1 as a test material.The photosynthetic electron transport rate (ETR),effective quantum yield (EQY),photochemical quenching coefficient (qp),and non-photochemical quenching coefficient (NPQ) of flag leaves were measured at the initial heading,full heading,10 d after full heading and 20 d after full heading stages.Results showed that the values of ETR,EQY and qp increased with rice development from initial heading to 20 d after full heading,whereas the NPQ decreased.During the measured stages,ETR,EQY and qp increased initially and then decreased as nitrogen application amount increased,but they peaked at different nitrogen fertilizer levels.The maximum ETR and EQY values appeared at the treatment of 135 kg/hm2 N.In conclusion,the optimum nitrogen amount for chlorophyll fluorescence characteristics of super hybrid rice was 135-180 kg/hm2.

  19. Chlorophyll Fluorescence and Dynamic Xanthophyll Reflectance as Methods to Estimate Photosynthesis with Remote Sensors - A Modelling Approach

    Science.gov (United States)

    Vilfan, N.; Van der Tol, C.; Verhoef, W.

    2016-12-01

    Chlorophyll fluorescence (ChlF) has been proven valuable in studying the dynamics of photosynthesis: together with the photochemical reflectance index (PRI), which reflects the changes in reflectance around 535 nm due to the xanthophyll cycle effect, it offers a powerful way to non-destructively quantify plant photosynthetic and dissipation activity from leaf to potentially global scale. We present an extended simulation model, Fluspect, for the transfer of light within the leaf as a function of its pigment contents and structure. Output of the model are reflectance and transmittance spectra of the leaf as well as ChlF spectra. From ChlF spectra, fluorescence quantum efficiency parameters (η) of photosystems I and II can be retrieved. Moreover, we extended and parameterized Fluspect by including a physically based description of the dynamic xanthophyll reflectance (XR). We introduced a new, retrievable parameter, V2Z, for the status of the XR. Finally, we combined the model Fluspect with a simple enzyme kinetics model of photosynthesis. In this study, we explore the combined model by using relations among photochemical quenching (PQ), non-photochemical quenching (NPQ), V2Z and η. We explore these relationships by using multiple available datasets, where measurements were by different combinations of the following methods: (1) hyperspectral leaf reflectance in visible to NIR region together with ChlF spectra, (2) gas exchange, and (3) Pulse Amplitude Modulated (PAM) fluorescence. The aim of the study is to explore the relationships between the two fundamentally different components, namely the transfer of light within the leaf and the enzyme kinetics of photosynthesis. Moreover, it is now possible to simulate dynamic xanthophyll reflectance and chlorophyll fluorescence quenching simultaneously, which is relevant for the remote sensing of photosynthesis.

  20. Diel Cycle of Photosynthetic Electron Transport and Fluorescence Characteristics in Natural Phytoplankton Communities.

    Science.gov (United States)

    Kolber, Z.; Klimov, D.

    2007-12-01

    Phytoplankton photosynthetic performance is strongly controlled by the daily irradiance cycle. The most pronounced effects are the photoinhibition of photosynthetic activity in the morning and noon hours, and the development of non-photochemical quenching throughout the day. These two effects are extensively investigated as they significantly diminish the daily production rates. Less obvious, but equally important are the daily changes in the kinetics of rate-limiting electron transport within Photosystem II and Photosystem I of the photosynthetic apparatus. Using a fast repetition rate (FRR) fluorometer operating in the continuous flow-through mode in the Eastern Tropical Pacific, we observed theses rates to decelerate by a factor of five during the night, but recovering to a full speed just before the dawn. We characterized the effects of these changes on the photosynthetic performance of phytoplankton by continuously recording the fast light curves (variable fluorescence versus irradiance relationship). Besides controlling photochemistry, these changes strongly affect the chlorophyll fluorescence yield, especially when measured with a multiple turnover excitation. We will discuss how the knowledge of these rate-limiting steps may improve the fluorescence-based estimates of photosynthesis and chlorophyll biomass.

  1. Bioanalytical Applications of Fluorenscence Quenching.

    Science.gov (United States)

    1986-02-10

    interaction of different cyclodextrin systems with the polynuclear aromatic compound, pyrene.(7 ) There are other cases where the Stern-Volmer plot deviates... encapsulated in lecithin liposomes. In this manner the fluorescence is self-quenched. When the liposomes are disrupted, the dye is released and

  2. Determination of rutin with L-Cys-CdS nano-fluorescent probe by fluorescence quenching method%L-Cys-CdS纳米荧光探针荧光猝灭法测定芦丁含量

    Institute of Scientific and Technical Information of China (English)

    于沙蔚; 程伟青; 潘爱萍

    2014-01-01

    建立了以L-Cys-CdS纳米荧光探针测定芦丁含量的荧光分析方法。以L-半胱氨酸为稳定剂,在水溶液中合成了CdS纳米荧光探针,其粒径约为20nm。芦丁对CdS纳米荧光探针有荧光猝灭作用,且其紫外光谱图与变温实验表明其为静态猝灭。考察了酸度、反应时间、干扰物质对该方法的影响。在体系pH为10.5时,该方法的线性范围为2.004~48.096μg·mL-1,r=0.9992,检出限为0.672μg·mL-1,精密度为1.2%。该方法已成功用于复方芦丁片中芦丁的含量测定,与中国药典中的标准方法比较,结果满意。该方法简便,快捷,可用于芦丁含量的测定。%Determination of rutin content by fluorometry was carried out. In this experiment,the Cds nano-fluorescent probe was pre-pared using L-Cys as stabilizer in aqueous solution. Its particle size is about 20 nm. Based on the decrease of fluorescence intensity after L-Cys-CdS reacted with rutin,a new method for the determination of rutin was established. The uv spectra and variable temper-ature experiment showed that the quenching process was static. Some experiment influencing factors were studied such as acidity,re-action time,and interfering substance. The results showed that the fluorescence intensity of system with pH 10. 5 had a good linear relationship with the concentration of rutin in the range of 2. 004~48. 096μg·mL-1(r=0. 9992). The detection limit was 0. 672μg ·mL-1 and the precision was 1. 2%. The method has been applied to the determination of rutin in compound rutin tablets,and com-pared with the standard method( HPLC) ,the results were satisfactory. The method presented here is simple,rapid and can be used for the determination of rutin.

  3. Spectrophotometric and fluorescence quenching studies of the charge transfer complexation of (4-dimethylamino-benzylidene)-(4,6-dimethyl-pyrimidin-2-yl)-amine with some organic acceptors

    Science.gov (United States)

    El-Sayed, Yusif S.

    2011-04-01

    The interaction of organic acceptors such as tetrafluoro-1,4-benzoquinone (p-TFQ), tetrachloro-1,4-benzoquinone (p-TCQ), tetrachloro-1,2-benzoquinone (o-TCQ), tetrabromo-1,4-benzoquinone (p-TBQ), tetrabromo-1,2-benzoquinone (o-TBQ) and 2,3-dichloro-5,6-dicyano-1,4-benzoquinone (DDQ) with (4-dimethylamino-benzylidene)-(4,6-dimethyl-pyrimidin-2-yl)-amine (SB) as donor is studied spectrophotometrically and fluoremetrically in dichloromethane and trichloromethane. The association constant ( K), thermodynamic parameters (Δ G°, Δ H° and Δ S°), oscillator strength ( f), transition dipole moment ( μ) and stoichiometric ratio are calculated using Benezi-Hildbrand's, Job and straight-line methods, respectively. The results reveal that the interaction between the donor and acceptors is due to π-π* transitions by the formation of radical ion pairs. The fluorescence quenching of SB with different organic acceptors is investigated. The results reveal that the fluorescence quenching obeys the static type mechanism via charge transfer complex formation in the ground state. The effect of temperature on the equilibrium constants of the CT complexes is also studied.

  4. FLUORESCENCE QUENCHING MECHANISM OF RUTIN TO RHODAMINE 6G AND THE DETERMINATION OF RUTIN IN TABLETS%芦丁对罗丹明6G的荧光猝灭机理研究及其含量测定

    Institute of Scientific and Technical Information of China (English)

    刘晓慧; 吕庆銮; 王怀友

    2011-01-01

    根据Stem - Volmer方程和罗丹明6G吸收光谱的变化研究了芦丁对其荧光猝灭的类型及机理,结果表明,芦丁与罗丹明6G作用,形成一种稳定的复合物,而发生荧光静态猝灭,求得复合物的结合常数K=5.55×105L/mol,结合点数n=1.26.芦丁含量在0.92~137.8μg/mL范围内与F0/F成正比,检出限为0.90μg/mL.据此建立了一种灵敏、简便、快速测定芦丁的新方法,并用于芦丁片剂中芦丁含量的测定.%The quenching mechanism and type of Rutin to Rhodamine 6G was studied based on the Stem - Volmer plot and the change of UV - Vis absorption spectrum of Rhodamine 6G. The result showed that Rutin reacted with Rhodamine 6G to form a stable complex so as to fluorescence static quenching process. The binding constant K(5.55 x 105 L/mol) and the number of binding sites n( 1.26) were obtained. A linear relationship was obtained between Fg/F and the concentration of Rutin in the range of 0.92 - 137.8 μg/mL. The detection limit was 0.90 μg/mL. A simple, rapid and precise method for determining Rutin was established based on the fluorescence quenching principle. According to the method, the result obtained for the determination of Rutin in tablet samples accorded with that determined by UV - Vis spectrophotometry.

  5. Tree size and light availability increase photochemical instead of non-photochemical capacities of Nothofagus nitida trees growing in an evergreen temperate rain forest.

    Science.gov (United States)

    Coopman, Rafael E; Briceño, Verónica F; Corcuera, Luis J; Reyes-Díaz, Marjorie; Alvarez, Daniela; Sáez, Katherine; García-Plazaola, José I; Alberdi, Miren; Bravo, León A

    2011-10-01

    Nothofagus nitida (Phil.) Krasser (Nothofagaceae) regenerates under the canopy in microsites protected from high light. Nonetheless, it is common to find older saplings in clear areas and adults as emergent trees of the Chilean evergreen forest. We hypothesized that this shade to sun transition in N. nitida is supported by an increase in photochemical and non-photochemical energy dissipation capacities of both photosystems in parallel with the increase in plant size and light availability. To dissect the relative contribution of light environment and plant developmental stage to these physiological responses, the photosynthetic performance of both photosystems was studied from the morpho-anatomical to the biochemical level in current-year leaves of N. nitida plants of different heights (ranging from 0.1 to 7 m) growing under contrasting light environments (integrated quantum flux (IQF) 5-40 mol m(-2). Tree height (TH) and light environment (IQF) independently increased the saturated electron transport rates of both photosystems, as well as leaf and palisade thickness, but non-photochemical energy flux, photoinhibition susceptibility, state transition capacity, and the contents of D1 and PsbS proteins were not affected by IQF and TH. Spongy mesophyll thickness and palisade cell diameter decreased with IQF and TH. A(max), light compensation and saturation points, Rubisco and nitrogen content (area basis) only increased with light environment (IQF), whereas dark respiration (R(d)) decreased slightly and relative chlorophyll content was higher in taller trees. Overall, the independent effects of more illuminated environment and tree height mainly increased the photochemical instead of the non-photochemical energy flux. Regardless of the photochemical increase with TH, carbon assimilation only significantly improved with higher IQF. Therefore it seems that mainly acclimation to the light environment supports the phenotypic transition of N. nitida from shade to

  6. Analysis of initial chlorophyll fluorescence induction kinetics in chloroplasts in terms of rate constants of donor side quenching release and electron trapping in photosystem II

    NARCIS (Netherlands)

    Vredenberg, W.J.

    2008-01-01

    The fluorescence induction F(t) of dark-adapted chloroplasts has been studied in multi-turnover 1 s light flashes (MTFs). A theoretical expression for the initial fluorescence rise is derived from a set of rate equations that describes the sequence of transfer steps associated with the reduction of

  7. Effects of water stress and light intensity on chlorophyll fluorescence parameters and pigments of Aloe vera L.

    Science.gov (United States)

    Hazrati, Saeid; Tahmasebi-Sarvestani, Zeinolabedin; Modarres-Sanavy, Seyed Ali Mohammad; Mokhtassi-Bidgoli, Ali; Nicola, Silvana

    2016-09-01

    Aloe vera L. is one of the most important medicinal plants in the world. In order to determine the effects of light intensity and water deficit stress on chlorophyll (Chl) fluorescence and pigments of A. vera, a split-plot in time experiment was laid out in a randomized complete block design with four replications in a research greenhouse. The factorial combination of three light intensities (50, 75 and 100% of sunlight) and four irrigation regimes (irrigation after depleting 20, 40, 60 and 80% of soil water content) were considered as main factors. Sampling time was considered as sub factor. The first, second and third samplings were performed 90, 180 and 270 days after imposing the treatments, respectively. The results demonstrated that the highest light intensity and the severe water stress decreased maximum fluorescence (Fm), variable fluorescence (Fv)/Fm, quantum yield of PSII photochemistry (ФPSII), Chl and photochemical quenching (qP) but increased non-photochemical quenching (NPQ), minimum fluorescence (F0) and Anthocyanin (Anth). Additionally, the highest Fm, Fv/Fm, ФPSII and qP and the lowest NPQ and F0 were observed when 50% of sunlight was blocked and irrigation was done after 40% soil water depletion. Irradiance of full sunlight and water deficit stress let to the photoinhibition of photosynthesis, as indicated by a reduced quantum yield of PSII, ФPSII, and qP, as well as higher NPQ. Thus, chlorophyll florescence measurements provide valuable physiological data. Close to half of total solar radiation and irrigation after depleting 40% of soil water content were selected as the most efficient treatments.

  8. The chlorophyll a fluorescence induction curve in the green microalga Haematococcus pluvialis: further insight into the nature of the P-S-M fluctuation and its relationship with the "low-wave" phenomenon at steady-state.

    Science.gov (United States)

    Fratamico, Anthony; Tocquin, Pierre; Franck, Fabrice

    2016-06-01

    Chlorophyll fluorescence is an information-rich signal which provides an access to the management of light absorbed by PSII. A good example of this is the succession of fast fluorescence fluctuations during light-induced photosynthetic induction after dark-adaptation. During this period, the fluorescence trace exhibits several inflexion points: O-J-I-P-S-M-T. Whereas the OJIP part of this kinetics has been the subject of many studies, the processes that underly the PSMT transient are less understood. Here, we report an analysis of the PSMT phase in the green microalga Haematococcus pluvialis in terms of electron acceptors and light use by photochemistry, fluorescence and non-photochemical quenching (NPQ). We identify additional sub-phases between P and S delimited by an inflexion point, that we name Q, found in the second time scale. The P-Q phase expresses a transient photochemical quenching specifically due to alternative electron transport to oxygen. During the transition from Q to S, the NPQ increases and then relaxes during the S-M phase in about 1 min. It is suggested that this transient NPQ observed during induction is a high energy state quenching (qE) dependent on the alternative electron transport to molecular oxygen. We further show that this NPQ is of the same nature than the NPQ, known as the low-wave phenomenon, which is transiently observed after a saturating light pulse given at steady-state. In both cases, the NPQ is oxygen-dependent. This NPQ is observed at external pH 6.0, but not at pH 7.5, which seems correlated with faster saturation of the PQ pool at pH 6.0.

  9. Detection of Mycobacterium tuberculosis by fluorescent quantitative PCR using self-quenched probe%结核分枝杆菌自身淬灭探针荧光定量PCR检测方法的建立

    Institute of Scientific and Technical Information of China (English)

    张伟铮; 黄彬; 林冬玲; 鄂顺梅; 薛新娜; 曾建明; 陈茶

    2011-01-01

    目的 利用自身淬灭探针技术建立敏感、特异、快速、价廉且能广泛应用的结核分枝杆菌荧光定量PCR检测方法.方法 构建重组质粒PET-32a(+)-16s rRNA作为标准品,自行设计自身淬灭探针,建立、优化定量PCR体系,并进行方法学评价及临床应用.结果 所建立方法的线性检测范围为102~109copies/μL.灵敏度为lcopy/μL,特异性为100%.高拷贝样品的天间CV为2.65%、批內CV为1.86%,低拷贝样品的天间CV为2.12%、批內CV为0.78%.该方法比培养方法更快速、灵敏.结论 以自身淬灭探针技术为平台的结核分枝杆菌荧光定量PCR方法灵敏度高、特异性好,对结核病的早期快速诊断有较高价值.%Aim To establish a novel real-time fluorescence PCR method to detect M. tuberculosis with high sensitivity,specificity,stability and lower price using the self-quenched primer. Methods The 16s rRNA gene of Mycobacterium tuberculosis was cloned into the vector PET-32a (+).The recombinant vector was used as standard template. The self quenched primer was designed according to the 16s rRNA gene sequence.The optimization of the PCR reaction system and method was evaluated. Results Restriction maps showed that the structure of recombinant plasmid PET-32a (+)-16s rRNA was the same as expected. Methodology analysis suggested that self-quenched probe was successful established with high sensitivity,specificity and accuracy. Conclusion The new real time fluorescence PCR is sensitive and specific, and is valuable for genetic diagnosis of Mycobacterium tuberculosis infection.

  10. Kinetic models of photosystem II should accommodate the effect of donor side quenching on variable chlorophyll a fluorescence in the microseconds time

    NARCIS (Netherlands)

    Vredenberg, W.J.

    2009-01-01

    Quantitative data on laser flash-induced variable fluorescence in the 100 ns to 1 ms time range (Belyaeva et al. in Photosynth Res 98:105–119, 2008) confirming those of others (Steffen et al. in Biochemistry 40:173–180, 2001, Biochemistry 44:3123–3132, 2005; Belyaeva et al. in Biophysics 51(6):976–9

  11. Acrylamide-quenching of Rhizomucor miehei lipase.

    Science.gov (United States)

    Stobiecka, Agnieszka

    2005-07-01

    Steady-state and time-resolved fluorescence-quenching measurements have been performed to study multitryptophan lipase from filamentous fungus Rhizomucor miehei. Using the steady-state acrylamide fluorescence quenching data and the fluorescence-quenching-resolved-spectra (FQRS) method, the total emission spectrum of native ("closed-lid") lipase has been decomposed into two distinct spectral components accessible to acrylamide. According to FQRS analysis, more quenchable component has a maximum of fluorescence emission at about 352 nm whereas less quenchable component emits at about 332 nm. The redder component participates in about 60-64% of the total lipase fluorescence and may be characterized by the dynamic and static quenching constants equal to K(1) = 3.75 M(-1) and V(1) = 1.12 M(-1), respectively. The bluer component is quenchable via dynamic mechanism with K(2) = 1.97 M(-1). Significant difference in the values of acrylamide bimolecular rate quenching constants estimated for redder and bluer component (i.e., k(q) = 1.2 x 10 (9) M(-1)s (-1) vs. k(q) = 4.3 x 10(8) M(-1) s(-1), respectively), suggests that tryptophan residues in fungal lipase are not uniformly exposed to the solvent.

  12. Determination of trace vitamin B2 by fluorescence quenching after cloud point extraction%浊点萃取、荧光淬灭法测定痕量维生素B2

    Institute of Scientific and Technical Information of China (English)

    谢秀娟; 邵鑫; 张振新

    2013-01-01

    根据高聚物的强富集作用及荧光淬灭法灵敏度高等特点,提出了浊点萃取、荧光淬灭法测定痕量维生素B2的新方法.主要研究了萃取剂、萃取时间、酸度、铬蓝黑的浓度、淬灭时间等因素的影响,并探讨了利用维生素B2淬灭铬蓝黑R的机理.实验表明,在最佳条件下,聚乙二醇辛基苯基醚~硫酸铵体系对维生素B2的一次萃取率可达到98%,利用该方法测定维生素B2的线性范围为:1.2×10-7~1.44×10-5g/L;回归方程:ΔF =0.13 +3.0C;相关系数为0.9974;检出限:8.4×10-8g/L.该方法用于样品测定,相对标准偏差在2.9% ~5.8%之间.%Based on the strong accumulation of polymer synthesis and the high sensitivity of fluorescence quenching etc,a new method for the determination of trace vitamin B2by fluorescence quenching after aqueous two-phase extraction was proposed.The paper discussed various factors such as the extractant,extraction time,acidity,the concentration of chromium nerazzurri R,quenching time etc,and studied the mechanism of fluorescence quenching of chromium nerazzurri R by vitamin B2.The results indicated that the extraction efficiency of vitamin B2 in the Polyethylene glycol octyl phenyl ether ~ (NH4)2SO4system was 98% in one-step extraction under the optimal conditions.The linear range of vitamin B2 was 1.2 × 10-7 ~ 1.44 × 10-5g/L,with regression equation:ΔF =0.13 + 3.0 C; and the correlation coefficient was 0.9974 ; the detection limit was 8.4 × 10-8g/L; and the relative standard deviations were 2.9% ~ 5.8%.Compared with other analysis for vitamin B2,this method has characteristics such as low detection limit,wide linear range,low-toxic,proenvironment etc.

  13. Effects of Self-coiling of Organic Molecules on Intramolecular Exciplex Formation and Fluorescence Quenching in DX-H2O Solvent System

    Institute of Scientific and Technical Information of China (English)

    CHEN,Ying-Qi(陈英奇); WANG,Xiao-Zhong(王晓钟); JIANG,Xi-Kui(蒋锡夔); SHI,Ji-Liang(史济良); SHI,Min(施敏); LI,Zhan-Tmg(黎占亭)

    2002-01-01

    Effects of self-coiling of organic molecules on intramolecular exciplex formation of compound I, in which the carbazole chromophore and terephthalic acid methylester acceptor group are linked by one (CH2)10 chain, and the decrease of the fluorescence intensities of compounds H, Ⅲ, and Ⅳ, in which the carbazole chromophore and 3,5-dinitrobenzoate are connected by one aliphatic chain of (CH2)10 (Ⅱ), (CH2)12 (Ⅲ),or (CH2)4 (Ⅳ), have been studied in the dioxane(DX)-H2Obinary system. The results show that self-coiling of organic molecules in DX-H2O facilitates intramolecular exciplex formation of Ⅰ and induces the decrease of fluorescence intensities of Ⅱ, because of the proximity effect brought about by selfcoiling of organic molecules under hydrophobic-lipophilic interaction (HLI) between the excited carbazole chromophore and the acceptor. Since the similar effects are observed even when the concentrations of the probes are less than their CAgCs (critical aggregate concentratons) in the DX-H2Omixture withthe same φ values, formation of the intermolecular exciplex has been excluded. The effects are found to be strongly depended on φ values, indicating that they are mainly driven by HLI. The properties of the acceptors can also affect the intrmolecular exciplex formation. With terephthalic acid methylester moiety as the acceptor, the carbazole chromophore exihibits the fluorescence spectra of the exciplex,while with 3,5- dinitrobenzoate moiety as the acceptor, only the fluorescence spectra of excited carbazolyl chromphore are observed.

  14. Varietal differences in photosynthetic characters and chlorophyll fluorescence induction kinetics parameters among intergeneric progeny derived from Oryza×Sorghum, its parents, and hybrid rice

    Institute of Scientific and Technical Information of China (English)

    KatsuyoshiShimizu; 唐建军; 陈欣

    2002-01-01

    A comparative study on the photosynthetic parameters among intergeneric progenies derived from Oryza sativa L.× Sorghum vulgare L. , its maternal parent Gui 630 and commercial 3-line hybrid rice Shanyou 63 in pot experiment in greenhouse was conducted. The morphological and photosynthetic characters of canopy leaves and chlorophyll fluorescence kinetic pm'mneters including Fv/Fm, Fv/F0, photochemical quenching coefficient and non-photochemical coefficient of canopy leaves of 3 varieties were measured. The results showed the progeny, Yuanyou 1, derived from an intergeneric cross of rice and sorghum possesses better canopy spatial architecture with thicker, heavier and bigger canopy leaf than its maternal parent Gui 630.Higher photosynthetic rate due to higher chlorophyll content, higher primary energy transformation efficiency,potential of PSII and non-photochemieal quenching coefficient (qE) were also measured in Yuanyou 1. These explain partly why the intergeneric progeny has higher biomass production, and better tolerance to adverse conditions and higher field yields even under stress conditions.

  15. Nonlinear optical property and fluorescence quenching behavior of PVP capped ZnS nanoparticles co-doped with Mn{sup 2+} and Sm{sup 3+}

    Energy Technology Data Exchange (ETDEWEB)

    Prasanth, S.; Irshad, P.; Raj, D. Rithesh; Vineeshkumar, T.V. [School of Pure and Applied Physics, Mahatma Gandhi University, Kottayam, Kerala 686562 (India); Philip, Reji [Optics group, Raman Research Institute, C.V. Raman Avenue, Bangalore 560080 (India); Sudarsanakumar, C., E-mail: c.sudarsan.mgu@gmail.com [School of Pure and Applied Physics, Mahatma Gandhi University, Kottayam, Kerala 686562 (India)

    2015-10-15

    ZnS nanoparticles co-doped with different percentages of Mn{sup 2+} and Sm{sup 3+} were synthesized by the chemical co-precipitation method using polyvinylpyrrolidone (PVP) as capping agent. Cubic zinc blende phase of the samples was confirmed from X-ray diffraction. The strong interaction between PVP and ZnS nanoparticles was studied from Fourier Transform Infrared (FTIR) spectrum. The band gap values of ZnS and co-doped ZnS nanoparticles were calculated from UV‐Visible spectra. The photoluminescence spectra of pure ZnS nanoparticles showed an emission at 436 nm and when doped with Mn{sup 2+} and Sm{sup 3+} an extra peak with high intensity was observed at 596 nm. On increasing the mole percentage of dopants the intensity of the extra peak showed an enhancement until a certain concentration and then a reduction with further increase in concentration. The binding parameters were determined by Stern‐Volmer relation. The nonlinear absorption coefficients of the doped and undoped samples were calculated using Z-scan technique. - Highlights: • PVP capped ZnS nanoparticles co-doped with Mn{sup 2+} and Sm{sup 3+} were synthesized. • The band gap of ZnS and co-doped ZnS nanoparticles were determined. • On increasing the percentage of dopants quenching of PL intensity was observed. • The nonlinear absorption coefficients of the samples were investigated.

  16. Determination of Dopamine Based on Acridine Orange-Graphene Oxide Fluorescence Quenching Method%吖啶橙-氧化石墨烯荧光猝灭法测定多巴胺

    Institute of Scientific and Technical Information of China (English)

    马翠萍

    2011-01-01

    Determination of trace dopamine has important significance on physiology, disease diagnosis and pharmaceuticals quality. In acid medium and surfactant, the fluorescence intensity of acridine orange could be quenched in the presence of graphene oxide. However, when dopamine was added into the system solution, the fluorescence intensity of the system was increased and the increasing fluorescence intensity was proportional to the amount of dopamine. Based on this, a novel method for the determination of dopamine was developed. The calibration curve was linear in the range of 0.05-12.0μmol/L. The linear regression equation was △IF= 3.9 +57.8c(μmol/L) (r =0. 993 3)and the detection limit was 2. 9 nmol/L. The method showed high sensitivity, and was successfully applied in the determination of dopamine in real samples with satisfactory results.%在酸性介质中氧化石墨烯对吖啶橙的荧光发生猝灭作用,此时加入适量多巴胺,则导致体系的荧光强度增强,且增强程度与多巴胺的加入量成正比.据此建立了吖啶橙-氧化石墨烯荧光光度法测定多巴胺的方法.多巴胺的质量浓度在0.05~12.0μmol/L范围内呈线性,线性方程为ΔIF=3.9+57.8c(μmoL/L),相关系数r=0.993 3;检出限为2.9 nmol/L.该方法具有良好的选择性,应用于实际样品的测定,结果满意.

  17. Preliminary Studies on chlorophyll fluorescence characteristics of endangered plant Ulmus elongata seedlings%濒危植物长序榆(Ulmus elongata)幼苗叶绿素荧光特性的初步研究

    Institute of Scientific and Technical Information of China (English)

    高建国; 徐根娣; 刘鹏; 岑维亚

    2011-01-01

    用Li-6400XT便携式光合作用仪对濒危植物长序榆幼苗的各叶绿素荧光参数的日变化和快速光响应曲线进行了测定.结果发现,光系统Ⅱ(PSⅡ)的实际光化学效率(ΦPS Ⅱ)、电子传递速率(ETR)在整个白天阶段较稳定,下午18:00显著下降.光化学淬灭(qP)先增大后减小.非光化学淬灭(NPQ)呈现出与光化学淬灭(qP)相反的变化趋势,中午最低,说明长序榆幼苗光能利用率较高.快速光曲线表明实际光化学效率(ΦPSⅡ)和光化学淬灭(qP)随着光合有效辐射(PAR)的增大而减小,电子传递速率(ETR)和非光化学淬灭(NPQ)随着光合有效辐射(PAR)的增大而增大.使用幂函数能够很好的拟合实际光化学效率(ΦPSⅡ)和电子传递速率(ETR)随光强的变化,而对数函数能较好的拟合实际光化学淬灭(qP)和非光化学淬灭(NPQ)随光强的变化.%Diurnal variations of chlorophyll fluorescence parameters and rapid light curves of endangered plant Ulmus elongata seedlings were determined by using Li -6400XT portable photosynthesis system. The results showed that the actual photochemical efficiency(ΦPSII)> electron transport rate(ETR)of photosystem H(PSII)were stable throughout the daytime, and decreased significantly at 18:00 pm. Photochemical quenching (qP)increased firstly at morning and then decreased after midday, non-photochemical quenching (NPQ)showed the opposite changes, the minimum at noon, indicating that the light use efficiency of Ulmus elongata seedlings were high. The rapid light curves showed that actual photochemical efficiency(ΦPSII) and photochemical quenching (qP)decreased while the photosynthetic active radiation (PAR)increased, electron transport rate (ETR)and non-photochemical quenching (NPQ)increased while the photosynthetic active radiation (PAR)increased. The power function could fit well the actual photochemical efficiency (ΦPSII)and electron transport rate (ETR)with the light intensity changes, while

  18. Effects of light quality on CO2 assimilation, chlorophyll-fluorescence quenching, expression of Calvin cycle genes and carbohydrate accumulation in Cucumis sativus.

    Science.gov (United States)

    Wang, Hong; Gu, Min; Cui, Jinxia; Shi, Kai; Zhou, Yanhong; Yu, Jingquan

    2009-07-17

    Light quality is thought to affect many plant physiological processes during growth and development, particularly photosynthesis. We examined how light quality influences plant photosynthesis by analyzing changes in photosynthetic parameters and expression levels of some photosynthesis related genes of cucumber (Cucumis sativus L. cv. Jinyou No. 1) plants. The plants were grown under different light qualities: purple (P), blue (B), green (G), yellow (Y), red (R) and white light (W) of the same photosynthetic photon flux density (PFD) about 350 micromol m(-2)s(-1) for 5 days. The results show that all plants grown under monochromatic light had reduced growth, CO(2) assimilation rate (Pn) and quantum yield of PSII electron transport (Phi(PSII)) as compared with plants grown under W, and these reductions were more significant in the plants under G, Y and R. The decrease in Phi(PSII) is mostly due to the reduction in photochemical quenching (qP). Interestingly, P- and B-grown plants had higher stomatal conductance (Gs), total and initial Rubisco activities and higher transcriptional levels of 10 genes which encode key enzymes in the Calvin cycle together with higher total soluble sugars, sucrose and starch contents as compared with W-grown plants, whereas in G-, Y-, and R-grown plants these parameters declined. Therefore, the reduction in Pn under P and B is likely the result of inactivation of photosystems, whilst under Y, G and R it is caused by, in addition to photosystem inactivation, the closure of stomata and the transcriptional down-regulation of genes for the Calvin cycle enzymes such as rbc L and rca. In conclusion, light quality alters plant photosynthesis by the effects on the activity of photosynthetic apparatus in leaves and the effects on the expression and/or activity of the Calvin cycle enzymes.

  19. Engineered drought tolerance in tomato plants is reflected in chlorophyll fluorescence emission.

    Science.gov (United States)

    Mishra, Kumud Bandhu; Iannacone, Rina; Petrozza, Angelo; Mishra, Anamika; Armentano, Nadia; La Vecchia, Giovanna; Trtílek, Martin; Cellini, Francesco; Nedbal, Ladislav

    2012-01-01

    Drought stress is one of the most important factors that limit crop productivity worldwide. In order to obtain tomato plants with enhanced drought tolerance, we inserted the transcription factor gene ATHB-7 into the tomato genome. This gene was demonstrated earlier to be up-regulated during drought stress in Arabidopsis thaliana thus acting as a negative regulator of growth. We compared the performance of wild type and transgenic tomato line DTL-20, carrying ATHB-7 gene, under well-irrigated and water limited conditions. We found that transgenic plants had reduced stomatal density and stomatal pore size and exhibited an enhanced resistance to soil water deficit. We used the transgenic plants to investigate the potential of chlorophyll fluorescence to report drought tolerance in a simulated high-throughput screening procedure. Wild type and transgenic tomato plants were exposed to drought stress lasting 18 days. The stress was then terminated by rehydration after which recovery was studied for another 2 days. Plant growth, leaf water potential, and chlorophyll fluorescence were measured during the entire experimental period. We found that water potential in wild type and drought tolerant transgenic plants diverged around day 11 of induced drought stress. The chlorophyll fluorescence parameters: the non-photochemical quenching, effective quantum efficiency of PSII, and the maximum quantum yield of PSII photochemistry yielded a good contrast between wild type and transgenic plants from day 7, day 12, and day 14 of induced stress, respectively. We propose that chlorophyll fluorescence emission reports well on the level of water stress and, thus, can be used to identify elevated drought tolerance in high-throughput screens for selection of resistant genotypes.

  20. Hyperspectral Reflectance and Fluorescence Indices for Carbon Related Parameters in Corn Crops

    Science.gov (United States)

    Middleton, E. M.; Corp, L. A.; Campbell, P. E.; Daughtry, C. S.

    2006-05-01

    The relative success in monitoring physiological or stand properties related to carbon (C) assimilation using narrow band (hyperspectral) reflectance and fluorescence indices was evaluated at leaf and canopy levels for mature corn crops (Zea mays L.) in two years. The corn crops were arranged in plots, each receiving a controlled nitrogen (N) fertilization regime at one of four dosages in experiments conducted in 2004 and 2005 at the USDA facility in Beltsville, MD, USA. Leaf reflectance spectra were obtained in conjunction with leaf level photosynthesis, chlorophyll fluorescence (ChlF), and chemistry (chlorophyll and carotenoid content per leaf area; percent C and N by dry mass). Whole plant canopy spectra and leaf area index data were obtained the same week as leaf measurements, followed by determinations of yields and biomass at harvest. The spectra were acquired using a spectroradiometer (ASD-FR FieldSpec Pro, Analytical Spectral Devices, Inc., Boulder, CO, USA), either coupled with a hemisphere for leaf optical properties or to measure nadir radiances 1 m above plant canopies within a 22o field of view. In situ photosynthesis and ChlF parameters were determined simultaneously with a photosynthetic system (Li-Cor 6400, Lincoln, Nebraska, USA) fitted with a fluorimeter under controlled conditions (temperature, irradiance, carbon dioxide, and humidity). Canopy-level steady state ChlF emissions were extracted from the apparent canopy reflectance spectra at 688 and 760 nm using the Fraunhofer Line Depth (FLD) principal. Both fluorescence and reflectance indices were successful in discriminating foliar constituents (e.g., pigment ratios, C/N ratios) but only fluorescence indices were correlated with light use efficiency (LUE) and corn yields in both years. LUE was inversely correlated (r = 0.85) with the ratio of non-photochemical (Qn) to photochemical (Qp) quenching of ChlF, (Qn/Qp). LUE was not strongly influenced by pigment levels, including the chlorophyll

  1. Short-duration exposure to radiofrequency electromagnetic radiation alters the chlorophyll fluorescence of duckweeds (Lemna minor).

    Science.gov (United States)

    Senavirathna, Mudalige Don Hiranya Jayasanka; Takashi, Asaeda; Kimura, Yuichi

    2014-12-01

    Plants growing in natural environments are exposed to radiofrequency electromagnetic radiation (EMR) emitted by various communication network base stations. The environmental concentration of this radiation is increasing rapidly with the congested deployment of base stations. Although numerous scientific studies have been conducted to investigate the effects of EMR on the physiology of humans and animals, there have been few attempts to investigate the effects of EMR on plants. In this study, we attempted to evaluate the effects of EMR on photosynthesis by investigating the chlorophyll fluorescence (ChF) parameters of duckweed fronds. During the experiment, the fronds were tested with 2, 2.5, 3.5, 5.5 and 8 GHz EMR frequencies, which are not widely studied even though there is a potentially large concentration of these frequencies in the environment. The duckweed fronds were exposed to EMR for 30 min, 1 h and 24 h durations with electric field strength of 45-50 V/m for each frequency. The results indicated that exposure to EMR causes a change in the non-photochemical quenching of the duckweeds. The changes varied with the frequency of the EMR and were time-varying within a particular frequency. The temperature remained unchanged in the duckweed fronds upon exposure to EMR, which confirms that the effect is non-thermal.

  2. CO2 Exchange and Chlorophyll Fluorescence of Phosphoenolpyruvate Carboxylase Transgenic Rice Pollen Lines

    Institute of Scientific and Technical Information of China (English)

    Li-Li Ling; Hong-Hui Lin; Ben-Hua Ji; De-Mao Jiao

    2006-01-01

    To elucidate the photosynthetic physiological characteristics and the physiological inherited traits of rice(Oryza sativa L.) hybrids and their parents, physiological indices of photosynthetic CO2 exchange and chlorophyll fluorescence parameters were measured in leaves of the maize phosphoenolpyruvate carboxylase (PEPC) transgenic rice as the male parent, sp. japonica rice cv. 9516 as the female parent, and the stable JAAS45 pollen line. The results revealed that the PEPC gene could be stably inherited and transferred from the male parent to the JAAS45 pollen line. Moreover, the JAAS45 pollen line exhibited high levels of PEPC activity, manifesting higher saturated photosynthetic rates, photosynthetic apparent quantum yield (AQY), photochemical efficiency of photosystem Ⅱ and photochemical and non-photochemical quenching, which indicated that the JAAS45 pollen line has a high tolerance to photo-inhibition/photooxidation under strong light and high temperature. Furthermore, JAAS45 was confirmed to still be a C3 plant by δ13C carbon isotope determination and was demonstrated to have a limited photosynthetic C4 microcycle by feeding with exogenous C4 primary products, such as oxaloacetate or maiate, or phosphoenolpyruvate.The present study explains the physiological inherited properties of PEPC transgenic rice and provides an expectation for the integration of traditional breeding and biological technology.

  3. Determination of trace amounts of silver in oxaliplatin by fluorescence quenching of CdTe quantum dots%CdTe量子点荧光猝灭法测定奥沙利铂中微量银

    Institute of Scientific and Technical Information of China (English)

    董微; 徐淑坤; 王莹

    2012-01-01

    以谷胱甘肽作为稳定剂,100℃恒温回流,直接合成水溶性CdTe量子点.基于Ag+对合成的CdTe量子点的荧光猝灭效应,建立了测定抗癌药物奥沙利铂中微量银的方法.考察了量子点浓度、缓冲液种类、缓冲液浓度、缓冲液pH和反应时间对银离子测定的影响.当量子点浓度为0.004g/L时,在0.10mmol/LpH7.4的磷酸缓冲溶液中,反应时间为5min,体系的相对荧光强度与Ag+的质量浓度呈良好的线性关系,其线性范围为16.42~98.50μg/L,线性相关系数为0.9975,检出限为0.12μg/L.%Water-soluble CdTe quantum dots (QDs) were synthesized by means of L-glutathione (GSH) as a modifying agent in an aqueous solution at 100 ℃. Based on the quenching of the fluorescence intensity of CdTe QDs by Ag(I) , a simple, rapid and sensitive method for the determination of trace amounts of silver in anti-cancer drug oxaliplatin was developed. In the study, the effects of experimental conditions, including concentration of CdTe QDs, the type, concentration and pH of buffer, and reacting time on the determination of Ag (I) were investigated in detail. When the concentration of QDs was 0.004 g/L in the phosphate buffer at pH 7. 4, the fluorescence quenching intensity of the CdTe QDs was linear with Ag (I) mass concentration in the range of 16. 42 ~ 98. 50 μg/L, with a linear correlation coefficient of 0. 9975. The limit of detection (3( ) was 0. 12 μ.g/L.

  4. Emission turn-on and solubility turn-off in conjugated polymers: one- and two-photon-induced removal of fluorescence-quenching solubilizing groups.

    Science.gov (United States)

    Schelkle, Korwin M; Becht, Steffy; Faraji, Shirin; Petzoldt, Martin; Müllen, Klaus; Buckup, Tiago; Dreuw, Andreas; Motzkus, Marcus; Hamburger, Manuel

    2015-01-01

    The synthesis of highly efficient two-photon uncaging groups and their potential use in functional conjugated polymers for post-polymerization modification are reported. Careful structural design of the employed nitrophenethyl caging groups allows to efficiently induce bond scission by a two-photon process through a combination of exceptionally high two-photon absorption cross-sections and high reaction quantum yields. Furthermore, π-conjugated polyfluorenes are functionalized with these photocleavable side groups and it is possible to alter their emission properties and solubility behavior by simple light irradiation. Cleavage of side groups leads to a turn-on of the fluorescence while solubility of the π-conjugated materials is drastically reduced.

  5. Chlorophyll Fluorescence in Partially Defoliated Grape Plants (Vitis vinifera L. cv. Chardonnay / Fluorescencia de la Clorofila en Plantas de Uva (Vitis vinifera L. cv. Chardonnay Defoliadas Parcialmente

    Directory of Open Access Journals (Sweden)

    Peña Olmos Jaime Ernesto

    2013-08-01

    Full Text Available The chlorophyll content and fluorescence weredetermined in five-year-old grape plants (Vitis vinifera L. cv.Chardonnay that were subjected to early partial defoliation,in Villa de Leyva, Colombia. The experimental design wascompletely randomized, consisting of two treatments (50%defoliation and control, each with four replications of 35 plants. Every two weeks, one of every two recently-emerged leaves was removed from the non-control plants. The determination of total chlorophyll content was carried out on six leaves per plant using a CCM-200 Plus chlorophyll meter, while chlorophyll fluorescence measurements were taken with one darkadapted leaf per plant using a Junior-PAM fluorometer. Initial fluorescence (Fo, maximum fluorescence (Fm, terminal fluorescence (Ft, variable fluorescence (Fv, electron transport rate (ETR, maximum photochemical quantum yield of PSII (Fv/ Fm, effective photochemical quantum yield of photosystem II (Y(II, photochemical fluorescence quenching coefficient (qP, two non-photochemical quenching coefficients (qN and NPQ,quantum yield of light-induced non-photochemical fluorescence quenching (Y(NPQ, and quantum yield of non-light-induced non-photochemical quenching (Y(NO were measured. The chlorophyll concentration index showed higher values in the defoliated plants. There were no significant differences for the values of Fm, Ft and Fv. Fo was higher in the defoliated plants, while ETR, Fv/Fm and Y(II showed higher values in the control plants. It is evident that a reduction in leaf area modifies thepartitioning of excitation energy destined for photochemicaland non-photochemical processes, thus directly influencing the photosynthetic process of the plants evaluated. / Utilizando un diseño completamente aleatorizado,con dos tratamientos (defoliación al 50% y control y cuatrorepeticiones de 35 plantas cada una, se determinó el contenido y la fluorescencia de la clorofila en plantas de uva, sometidas a defoliación parcial

  6. [Effects of exogenous Ca2+ on morphological and photosynthetic characteristics and chlorophyll fluorescent parameters of squash seedlings under high temperature and strong light stress].

    Science.gov (United States)

    Qin, Shu-hao; Li, Ling-ling; Chen, Na-na

    2010-11-01

    Taking squash (Cucurbita pepo L.) variety Alan as test object, this paper studied the effects of exogenous Ca2+ on the morphological and photosynthetic characteristics and chlorophyll fluorescent parameters of squash seedlings under the cross-stress of high temperature and strong light. Under the stress, applying 5-20 mmol x L(-1) of Ca2+ increased the plant height, leaf area, chlorophyll and carotenoid contents, photosynthetic rate (Pn), stoma conductance (Gs), transpiration rate (Tr), maximal PS II efficiency (Fv/Fm), actual PS II efficiency (phi(PS II)), and photochemical queching coefficient (q(P)), and decreased the intercellular CO2 concentration (Ci) and non-photochemical fluorescence quenching coefficient (NPQ), suggesting that this application of exogenous Ca2+ could effectively mitigate the damage of high temperature and strong light stress on the squash seedlings leaf, and make it keep more rapid photosynthetic electron transfer rate and higher PS II electron transfer activity. Among the treatments of applying Ca2+, 10 mmol Ca2+ x L(-1) had the best effect. When the Ca2+ application rate exceeded 40 mmol x L(1), no mitigation effect was observed on the high temperature and strong light stress.

  7. Understanding Solar Induced Fluorescence: Building up from Leaf Scale Measurements (Invited)

    Science.gov (United States)

    Berry, J. A.; Van der Tol, C.; Frankenberg, C.; Joiner, J.; Guanter, L.

    2013-12-01

    the photochemical reactions at PSII and with the emission of fluorescence. We used simultaneous measurements of CO2 exchange and PAM fluorescence under laboratory conditions to evaluate the dependence of the kinetic constant for non-photochemical quenching (Kn) on relative quantum yield (or light use efficiency) for photosynthesis under a range of conditions, and we integrated this with a conventional parameterization for photosynthetic biochemistry to simulate SIF and GPP in the SCOPE model. We show that the fluorescence parameterization is able to reproduce leaf scale measurements well and that fluorescence measurements place new and more stringent constraints on photosynthesis parameterizations. The model was then used to evaluate the potential for using retrievals of SIF to estimate GPP, the integrated Vcmax of the canopy, the presence of water stress, and biophysical properties such as leaf angle distribution and chlorophyll content. This study strongly supports the usefulness of SIF, and illustrates some of the interactions that must be taken into account in interpreting these measurements.

  8. The role of hydrogen bonding in the fluorescence quenching of 2,6-bis((E)-2-(benzoxazol-2-yl)vinyl)naphthalene (BBVN) in methanol

    Science.gov (United States)

    Hammam, Essam; Basahi, Jalal; Ismail, Iqbal; Hassan, Ibrahim; Almeelbi, Talal

    2017-02-01

    The excited state hydrogen bonding dynamics of BBVN in hydrogen donating methanol solvent was explored at the TD-BMK/cc-pVDZ level of theory with accounting for the bulk environment effects at the polarizable continuum model (PCM). The heteroatoms of the BBVN laser dye form hydrogen bonds with four methanol molecules. In the formed BBVN-(MeOH)4 complex, the A-type hydrogen bond (N…HO), of an average strength of 25 kJ mol- 1, is twofold stronger than the B-type (O…HO) one. Upon photon absorption, the total HB binding energy increases from 78.5 kJ mol- 1 in the ground state to 82.6 kJ mol- 1 in the first singlet (S1) excited state. In consequence of the hydrogen bonding interaction, the absorption band maximum of the BBVN-(MeOH)4 complex, which was anticipated at 398 nm (exp. 397), is redshifted by 5 nm relative to that of the free dye in methanol. The spectral shift of the stretching vibrational mode for the hydrogen bonded hydroxyl groups (with a maximum shift of 285 cm- 1) from that of the free methanol indicated the elevated strengthening of hydrogen bonds in the excited state. The vibrational modes associated with hydrogen bonding provide effective accepting modes for the dissipation of the excitation energy, thus, decreasing the fluorescence quantum yield of BBVN in alcohols as compared to that in the polar aprotic solvents. Since there is no sign of photochemistry or phosphorescence, it seems reasonable in view of the outcomes of this study to assign the major decay process of the excited singlet (S1) of BBVN in alcohols to vibronically induced internal conversion (IC) facilitated by hydrogen bonding.

  9. The effect of various sapropel concentrations on content and fluorescence of photosynthetic pigments of bean

    Directory of Open Access Journals (Sweden)

    Irena Januškaitienė

    2017-03-01

    Full Text Available Tarosiškio lake sapropel impact on beans (Vicia faba L. photosynthesis parameters (content of chlorophylls and chlorophyll a fluorescence was investigated in this study. Plants were sown in 1 L volume pots by 5 seeds with light loamy soil and grown in growth chambers. Considering sapropel composition, 2.2; 3.1 and 4 t/ha dry sapropel concentrations were chosen for investigation. Sapropel affected plants were compared with plants grown in unfertilised and with synthetic fertiliser fertilised soils. On 14th day of experiment, when the plants reached two leaves growths stage (BBCH 12, chlorophyll a fluorescence parameters of investigated plants were measured. Then plants were grown for 4 weeks more and at stem elongation stage (BBCH 31 chlorophyll a fluorescence parameters were measured repeatedly and also the content of chlorophylls and carotenoids were investigated. The efficiency II photosystem of bean increased by increasing sapropel concentration in soil, but insignificantly (p>0.05. Photosynthesis performance index was increasing (r=0.91; p<0.05 up to 3.1 t/ha sapropel concentration increase at BBCH 12 growth stage. The same tendency was detected for electron transfer rate of bean (r=0.9; p<0.05 at this growth stage, but at later stage (BBCH 31 it slightly lowered (r=-0.02; p>0.05. At BBCH 12 stage the highest non photochemical quenching (NPQ value was measured in control beans, while at BBCH 31 stage, opposite trend was noticed (r=0.86; p <0.05. At BBCH 31 growth stage sapropel concentration increase made bean chlorophyll content to decrease, but insignificantly (r=-0.18, p>0.05, and the changes in carotenoid contents were similar to chlorophyll a+b.DOI: http://dx.doi.org/10.5755/j01.erem.72.4.16585

  10. Relationships between the photochemical reflectance index (PRI) and chlorophyll fluorescence parameters and plant pigment indices at different leaf growth stages.

    Science.gov (United States)

    Rahimzadeh-Bajgiran, Parinaz; Munehiro, Masashi; Omasa, Kenji

    2012-09-01

    This study aimed to evaluate the photochemical reflectance index (PRI) for assessing plant photosynthetic performance throughout the plant life cycle. The relationships between PRI, chlorophyll fluorescence parameters, and leaf pigment indices in Solanum melongena L. (aubergine; eggplant) were studied using photosynthetic induction curves both in short-term (diurnal) and long-term (seasonal) periods under different light intensities. We found good correlations between PRI/non-photochemical quenching (NPQ) and PRI/electron transport rate (ETR) in the short term at the same site of a single leaf but these relationships did not hold throughout the life of the plant. In general, changes in PRI owing to NPQ or ETR variations in the short term were PRI was highly correlated to plant pigments, especially chlorophyll indices measured by spectral reflectance. Moreover, relationships of steady-state PRI/ETR and steady-state PRI/photochemical yield of photosystem II (Φ(PSII)) measured at uniform light intensity at different life stages proved that overall photosynthesis capacity and steady-state PRI were better correlated through chlorophyll content than NPQ and xanthophylls. The calibrated PRI index accommodated these pigments effects and gave better correlation with NPQ and ETR than PRI. Further studies of PRI indices based on pigments other than xanthophylls, and studies on PRI mechanisms in different species are recommended.

  11. Photosynthetic properties of spring geophytes assessed by chlorophyll fluorescence analysis.

    Science.gov (United States)

    Recchia, Irene; Sparla, Francesca; Pupillo, Paolo

    2017-09-01

    Since spring ephemerals are credited to be all "sun" species with unusually elevate photosynthesis, in contrast to shade-tolerant trees and understory geophytes with a long aboveground cycle, we examined the photosynthetic efficiency of 6 woody species, 9 long-cycle geophytes, and 8 spring ephemeral geophytes using blue flashes of increasing energy with the Imaging PAM fluorometer. Several parameters were obtained: quantum yield of electron transport (ΦETR) or of PSII (ΦPSII), maximum measured photosynthesis rate (ETRhv), maximum extrapolated rate of photosynthesis (ETRem), half-saturating photon flux density (KPAR), and in some cases photochemical (qP) and non-photochemical quenching (NPQ). Results confirm the ecological consistency of the three plant groups, with internal differences. Woody species have low ETRem and KPAR values with good ΦETR; long-cycle herbs have low ETRem and ΦETR and moderate KPAR values; spring ephemerals have elevate ΦETR, ETRem and KPAR values. The mean ETRem of ephemerals of 91 μmol m(-2) s(-1) exceeds that of long-cycle herbs 2.9-fold and woody species 4.8-fold, and corresponds to 19 μmol CO2 m(-2) s(-1) by assuming an ETR/ΦCO2 ratio of 4.7. Highest photosynthesis rates and KPAR were exhibited by five ephemerals (Eranthis, Erythronium, Narcissus, Scilla, Tulipa) with peak ETRem values equivalent to ∼40 μmol CO2 m(-2) s(-1) or ∼60 μmol CO2 (g Chl)(-1) s(-1) ("sun" species). According to a new, fluorescence based heliophily index, all trees and five long-cycle herbs were definitely "shade" species, while four long-cycle herbs and three ephemerals were intermediate shade-tolerant. Copyright © 2017 Elsevier Masson SAS. All rights reserved.

  12. Conical Tapered Tip Fiber Optical Oxygen Sensor Probe Based on Fluorescence Quenching%基于荧光猝灭的锥尖型光纤氧传感探头

    Institute of Scientific and Technical Information of China (English)

    邓辉; 王晓英; 肖吉群; 柏云

    2015-01-01

    利用动态化学腐蚀法制备锥尖型光纤端面,以提拉法镀溶胶凝胶敏感膜,组装了基于荧光猝灭的直径仅1.5 mm的光纤氧传感探头。探头锥面的长径比可通过调控腐蚀参数(温度、腐蚀液面下降速度)调控。构建相移测量系统,优化参数后进行0~21%范围内的氧含量测定,工作曲线呈现良好的线性特征(R2=0.9996),偏差小于测量值的5%。%Conical tapered tip was prepared by dynamic chemical etching method,on which sensitive membrane was plated through sol-dipping coating.Then,fiber optical oxygen sensor probe of 1.5 millimeters based on fluorescence quenching was fabrica-ted.The geometrical parameters could be regulated etch parameters,such as temperature and descent velocity.Phase shift measuring system was set to evaluate the performance of the probe.After parameters optimized,the oxygen content was tested within the scope of 0% ~21%.The working curve shows favorable linearity (R2 = 0.999 6),and the deviation is less than 5% of measured value.

  13. 稳态荧光猝灭法确定胶束聚合合成条件%Determination of the synthesis condition of micellar polymerization by steady-state fluorescence quenching method

    Institute of Scientific and Technical Information of China (English)

    钟金杭; 郭拥军; 柳建新; 杨雪杉; 杨红苹; 冯茹森; 祝仰文

    2012-01-01

    以芘(Py)为荧光探针,十六烷基氯化吡啶(CPC)为猝灭剂,用稳态荧光猝灭法研究十二烷基硫酸钠(SDS)浓度和溶液极性对其胶束聚集数的影响.结果表明,当SDS浓度在5~42倍cmc时,胶束聚集数Nagg随SDS的浓度增大而增大,并且趋势逐渐变缓.当SDS浓度为11.3倍cmc时,胶束聚集数随NaCl浓度增大而明显增大,I1/I3值逐渐减小.以上两种条件下聚集数的增大引起疏水微嵌段长度较大的变化,而微嵌段长度又是胶束聚合中最重要的参数之一.因此,胶束聚合合成微嵌段缔合聚合物中,SDS浓度和溶液极性对其胶束聚集数的影响不能忽略.%The micellar aggregation numbers of SDS with different concentrations of SDS or polarity were determined by steady-state fluorescence quenching method in which pyrene was used as a fluorescence probe and cetylpyridinium chloride as a quencher. The results showed that /Vagg increased with increasing the SDS concentration in a range of 5 -42 times cmc and the increased value became more and more slowly. When the concentration of SDS was 11.3 times cmc,the ./Vagg increased significantly with increasing the NaCl concentration and /,//3 decreased gradually. Under these two conditions, the increase numbers of aggregation caused a great change in hydrophobe micro-block length, and the micro-block length was one of the most important parameter in micellar polymerization. Therefore,in the synthesis of the micro-block' associative polymers by micellar polymerization, the effect of concentrations of SDS or polarity on micellar aggregation numbers can not be ignored.

  14. Identification of the chromophores involved in aggregation-dependent energy quenching of the monomeric photosystem II antenna protein Lhcb5.

    Science.gov (United States)

    Ballottari, Matteo; Girardon, Julien; Betterle, Nico; Morosinotto, Tomas; Bassi, Roberto

    2010-09-03

    Non-photochemical quenching (NPQ) of excess absorbed light energy is a fundamental process that regulates photosynthetic light harvesting in higher plants. Among several proposed NPQ mechanisms, aggregation-dependent quenching (ADQ) and charge transfer quenching have received the most attention. In vitro spectroscopic features of both mechanisms correlate with very similar signals detected in more intact systems and in vivo, where full NPQ can be observed. A major difference between the models is the proposed quenching site, which is predominantly the major trimeric light-harvesting complex II in ADQ and exclusively monomeric Lhcb proteins in charge transfer quenching. Here, we studied ADQ in both monomeric and trimeric Lhcb proteins, investigating the activities of each antenna subunit and their dependence on zeaxanthin, a major modulator of NPQ in vivo. We found that monomeric Lhcb proteins undergo stronger quenching than light-harvesting complex II during aggregation and that this is enhanced by binding to zeaxanthin, as occurs during NPQ in vivo. Finally, the analysis of Lhcb5 mutants showed that chlorophyll 612 and 613, in close contact with lutein bound at site L1, are important facilitators of ADQ.

  15. [Effects of O3-FACE(ozone-free air control enrichment) on gas exchange and chlorophyll fluorescence of rice leaf].

    Science.gov (United States)

    Liang, Jing; Zeng, Qing; Zhu, Jian-Guo; Zhu, Chun-Wu; Cao, Ji-Ling; Xie, Zu-Bin; Liu, Gang; Tang, Hao-Ye

    2010-04-01

    O3-FACE (Ozone-free air control enrichment) platform has been established for observing the effect of elevated tropospheric ozone concentration on the gas exchange and chlorophyll fluorescence of two rice varieties (Wuyunjing 21 and Liangyoupeijiu). The results showed that high ozone concentration decreased the net photosynthetic rate (Pn), stomatal conductance (Gs), and transpiration rate (Tr) of rice leaves. After 76d fumigation the decline in them for Wuyunjing 21 was as follows: 21.7%, 26.64% and 24.74% respectively, and that for Liangyoupeijiu was as follows: 25.53%, 30.31% and 25.48% respectively; however, no significant impact on leaf intercellular CO2 concentration was observed. Chlorophyll fluorescence kinetics parameters changed as can be seen by the decrease in F0 (initial fluorescence in the dark), ETR (The apparent electron transfer rate) and psiPSII (actual photochemical efficiency of PS II in the light), and the increase in NPQ (non-photochemical quenching). After 76 days of O3 treatment, the NPQ of Wuyunjing 21 and Liangyoupeijiu was enhanced by 16.37% and 11.77%, respectively. The impact of ozone on rice was a cumulative effect, and the extent of variation in the above parameters and the differences between the two varieties were enlarged as the O3 treatment time increased; At the same time because the rice leaf intercellular CO2 concentration did not significantly reduce, the inferred decrease in net photosynthetic rate was restricted by non-stomatal factors. The results of this experiment indicated that Liangyoupeijiu was more susceptible to ozone than Wuyunjing 21.

  16. D-酪氨酸荧光猝灭法同时测定6-苄基腺嘌呤和糠氨基嘌呤%Simultaneous Determination of 6-Benzylaminopurine and Kinetin Based on D-Tyr Fluorescence Quenching

    Institute of Scientific and Technical Information of China (English)

    赵小辉; 朱乾华; 贺薇; 周尚; 杨琼; 黎小艳; 杨季冬

    2013-01-01

    [Aims] The method of simultaneous determination of 6-benzylaminourine and kinetin was established by D-Tyr fluorescence quenching. [Methods] The two natural exogenous cytokinins 6-benzylaminourine and kinetin were analyzed qualitatively by the degree of fluorescence polarization(p) and fluorescence anisotropy(r) based on the measurements of the polarized fluorescence signals, and quantified simultaneously based on the fluorescence quenching spectra signals and the double standard curve method. [Results] The degree of fluorescence polarization and fluorescence anisotropy of the D-Tyr-6-BA system were larger than that of the D-Tyr-KT system, and the two natural cytokinins mixed systems could be studied and characterized via calculating the degree of fluorescence polarization and fluorescence anisotropy. [Conclusions] The method was applied to simultaneous determination of 6-benzylaminourine and kinetin in plum skin and balsam pear skin with satisfactory results.%[目的]采用D-酪氨酸荧光猝灭法建立同时测定6-苄基腺嘌呤和糠氨基嘌呤的定量分析方法.防法]利用荧光偏振信号计算获得的荧光偏振度(p)和荧光各向异性(r)来区分6-苄基腺嘌呤和糠氨基嘌呤这2种天然植物性激素,同时利用荧光猝灭信号和双标准曲线计量分析法同时测定这2种天然植物性激素.[结果]D-酪氨酸-6-苄基腺嘌呤体系对应着较大的荧光偏振度和荧光各向异性度,而D-酪氨酸-糠氨基嘌呤体系则对应着较小的荧光偏振度和荧光各向异性度,因此通过计算其荧光偏振度和荧光各向异性可对这2种细胞分裂素的混合体系进行研究与表征.[结论]该法可以应用于市售李子和苦瓜样品表皮中6-苄基腺嘌呤和糠氨基嘌呤的同时测定,结果令人满意.

  17. [Effects of plastic film mulching and rain harvesting modes on chlorophyll fluorescence characteristics, yield and water use efficiency of dryland maize].

    Science.gov (United States)

    Li, Shang-Zhong; Fan, Ting-Lu; Wang, Yong; Zhao, Gang; Wang, Lei; Tang, Xiao-Ming; Dang, Yi; Zhao, Hui

    2014-02-01

    The differences on chlorophyll fluorescence parameters, yield and water use efficiency of dryland maize were compared among full plastic film mulching on double ridges and planting in catchment furrows (FFDRF), half plastic film mulching on double ridges and planting in catchment furrows (HFDRF), plastic film mulching on ridge and planting in film-side (FS), and flat planting with no plastic film mulching (NM) under field conditions in dry highland of Loess Plateau in 2007-2012. The results showed that fluorescence yield (Fo), the maximum fluorescence yield (Fm), light-adapted fluorescence yield when PS II reaction centers were totally open (F), light-adapted fluorescence yield when PS II reaction centers closed (Fm'), the maximal photochemical efficiency of PS II (Fv/Fm), the actual photochemical efficiency of PS II in the light (Phi PS II), the relative electron transport rate (ETR), photochemical quenching (qP) and non-photochemical quenching (qN) in maize leaves of FFDRF were higher than that of control (NM), and the value of 1-qP was lower than that of control, at 13:00, chlorophyll fluorescence parameters values of FFDRF was significantly higher than control, which were increased by 5.3%, 56.8%, 10.7%, 36.3%, 23.6%, 56.7%, 64.4%, 45.5%, 23.6% and -55.6%, respectively, compared with the control. Yield and water use efficiency of FFDRF were the highest in every year no matter dry year, normal year, humid year and hail disaster year. Average yield and water use efficiency of FFDRF were 12,650 kg x hm(-2) and 40.4 kg x mm(-1) x hm(-2) during 2007-2012, increased by 57.8% and 61.6% compared with the control, respectively, and also significantly higher compared with HFDRF and PS. Therefore, it was concluded that FFDRF had significantly increased the efficiency of light energy conversion and improved the production capacity of dryland maize.

  18. Quenching: fact or fiction?

    Science.gov (United States)

    Basketter, D

    2000-11-01

    Fragrance chemicals are a frequently reported cause of allergic contact dermatitis (ACD), a matter which has recently come into considerable prominence, to the point that legislation in Europe is under serious consideration. Certain skin-sensitizing fragrance chemicals have been reported by the producing industry to be rendered safe (quenched), at least in terms of ACD, when they are used in the presence of a specific quenching agent. Accordingly, it seemed timely to review this apparent quenching phenomenon, considering the available data and potential mechanistic hypotheses that might be used to explain it. If it is correct, it should be a phenomenon of potentially enormous value in the elimination of the allergenic properties of at least a proportion of common skin sensitizers. Whilst there is some evidence in man for the occurrence of quenching during the induction of skin sensitization, a much more substantial body of work has failed to find supportive evidence in various animals models, at a chemical level or at elicitation in human subjects with existing allergy. On balance, it is concluded that quenching of fragrance allergens is a phenomenon still awaiting positive evidence of existence.

  19. Inhomogeneous Thermal Quenches

    CERN Document Server

    Sohrabi, Kiyoumars A

    2015-01-01

    We describe holographic thermal quenches that are inhomogeneous in space. The main characteristic of the quench is to take the system far from its equilibrium configuration. Except special extreme cases, the problem has no analytic solution. Using the numerical holography methods, we study different observables that measure thermalization such as the time evolution of the horizon, two-point Wightman function and entanglement entropy (EE). Having an extra nontrivial spacial direction, allows us to study this peculiar generalization since we categorize the problem based on whether we do the measurements along this special direction or perpendicular to it. Exciting new features appear that are absent in the common computations in the literature, the appearance of negative EE valleys surrounding the positive EE hills and abrupt quenches that occupy the whole space at their universal limit are some of the results of this paper. We have tried to provide physical explanations wherever possible. The physical picture ...

  20. The Quench Action

    Science.gov (United States)

    Caux, Jean-Sébastien

    2016-06-01

    We give a pedagogical introduction to the methodology of the Quench Action, which is an effective representation for the calculation of time-dependent expectation values of physical operators following a generic out-of-equilibrium state preparation protocol (for example a quantum quench). The representation, originally introduced in Caux and Essler (2013 Phys. Rev. Lett. 110 257203), is founded on a mixture of exact data for overlaps together with variational reasonings. It is argued to be quite generally valid and thermodynamically exact for arbitrary times after the quench (from short times all the way up to the steady state), and applicable to a wide class of physically relevant observables. Here, we introduce the method and its language, give an overview of some recent results, suggest a roadmap and offer some perspectives on possible future research directions.

  1. Quantum quenches during inflation

    CERN Document Server

    Carrilho, Pedro

    2016-01-01

    We propose a new technique to study fast transitions during inflation, by studying the dynamics of quantum quenches in an $O(N)$ scalar field theory in de Sitter spacetime. We compute the time evolution of the system using a non-perturbative large-$N$ limit approach. We derive the self-consistent mass equation for several physically relevant transitions of the parameters of the theory, in a slow motion approximation. Our computations reveal that the effective mass after the quench evolves in the direction of recovering its value before the quench, but stopping at a different asymptotic value, in which the mass is strictly positive. Furthermore, we tentatively find situations in which the effective mass can be temporarily negative, thus breaking the $O(N)$ symmetry of the system for a certain time, only to then come back to a positive value, restoring the symmetry. We argue the relevance of our new method in a cosmological scenario.

  2. Effects of SO{sub 2} fumigations on photosynthetic CO{sub 2} gas exchange, chlorophyll a fluorescence emission and antioxidant enzymes in the lichens Evernia prunastri and Ramalina farinacea

    Energy Technology Data Exchange (ETDEWEB)

    Deltoro, V.I.; Gimeno, C.; Calatayud, A.; Barreno, E. [Univ. de Valencia, Inst. `Cavanilles` de Biodiversitat i Biologia Evolutiva, Facultat de Ciencies Biologiques, Burjassot (Spain)

    1999-08-01

    The effects of elevated gaseous SO{sub 2} concentrations in the lichens Evernia prunastri (L.) Ach. and Ramalina farinacea (L.) Ach. were investigated by means of gas exchange, modulated chlorophyll fluorescence analysis and antioxidant enzyme assays. The response to SO{sub 2} of the studied species differed markedly. Net photosynthetic rates were more adversely affected in E. prunastri than in R. farinacea. In addition, processes dependent on thylakoid membrane integrity such as PSII-mediated electron flow and non-photochemical quenching were reduced to a greater extent by exposure to SO{sub 2} in E. prunastri. Moreover, the ability to re-oxidize the quinone pool was lower in this species. Finally, the activity of chloroplastidic and cytoplasmic antioxidant enzymes was decreased in E. prunastri in response to fumigations but increased in R. farinacea. The results suggest that the ability to process and deal with the SO{sub 2} once it has been absorbed must play a role in determining the sensitivity of these lichen species to this air pollutant. (au)

  3. A chlorophyll fluorescence analysis of photosynthetic efficiency, quantum yield and photon energy dissipation in PSII antennae of Lactuca sativa L. leaves exposed to cinnamic acid.

    Science.gov (United States)

    Hussain, M Iftikhar; Reigosa, Manuel J

    2011-11-01

    This study investigated the effects of cinnamic acid (CA) on growth, biochemical and physiological responses of Lactuca sativa L. CA (0.1, 0.5, 1.0 and 1.5 mM) treatments decreased plant height, root length, leaf and root fresh weight, but it did not affect the leaf water status. CA treatment (1.5 mM) significantly reduced F(v), F(m), photochemical efficiency of PSII (F(v)/F(m)) and quantum yield of PSII (ΦPSII) photochemistry in L. sativa. The photochemical fluorescence quenching (qP) and non-photochemical quenching (NPQ) were reduced after treatment with 1.5 mM CA. Fraction of photon energy absorbed by PS II antennae trapped by "open" PS II reaction centers (P) was reduced by CA (1.5 mM) while, portion of absorbed photon energy thermally dissipated (D) and photon energy absorbed by PSII antennae and trapped by "closed" PSII reaction centers (E) was increased. Carbon isotope composition ratios (δ(13)C) was less negative (-27.10) in CA (1.5 mM) treated plants as compared to control (-27.61). Carbon isotope discrimination (Δ(13)C) and ratio of intercellular CO(2) concentration (ci/ca) from leaf to air were also less in CA treated plants. CA (1.5 mM) also decreased the leaf protein contents of L. sativa as compared to control.

  4. Gas exchange and chlorophyll fluorescence of pea (Pisum sativum L.) plants in response to ambient ozone at a rural site in Egypt.

    Science.gov (United States)

    Ismail, I M; Basahi, J M; Hassan, I A

    2014-11-01

    Egyptian pea cultivars (Pisum sativum L. cultivars Little Marvel, Perfection and Victory) grown in open-top chambers were exposed to either charcoal-filtered (FA) or non-filtered air (NF) for five consecutive years (2009-2013) at a rural site in northern Egypt. Net photosynthetic rates (PN), stomatal conductance (gs), intercellular CO2 (Ci) and chlorophyll fluorescence were measured. Ozone (O3) was found to be the most prevalent pollutant common at the rural site and is suspected to be involved in the alteration of the physiological parameters measured in the present investigation. PN of different cultivars were found to respond similarly; decreases of 23, 29 and 39% were observed in the cultivars Perfection, Little Marvel and Victory, respectively (averaged over the five years) due to ambient O3. The maximum impairment in PN was recorded in the cultivar Victory (46%) in 2013 when the highest O3 levels were recorded (90 nL L(-1)). The average stomatal conductance decreased by 20 and 18% in the cultivars Little Marvel and Perfection, respectively, while the average stomatal conductance increased on average by 27% in the cultivar Victory. A significant correlation was found between PN and Ci, indicating the importance of non-stomatal limitations of photosynthesis, especially in the cultivar Victory. The PN vs. Ci curves were fitted to a non-rectangular hyperbolic model. The actual quantum yield (ΦPSII) and photochemical quenching coefficient (qP) were significantly decreased in the leaves of plants exposed to NF air. Non-photochemical quenching (NPQ) was increased in all cultivars. Exposure to NF air caused reductions in chlorophyll (Chl a) of 19, 16 and 30% in the Little Marvel, Perfection and Victory cultivars, respectively.

  5. Study on the Interaction between Humic Substances in Soil and Carbamate Pesticides Using Fluorescence Quenching Titration Method%荧光猝灭滴定法研究土壤腐殖质与氨基甲酸酯类农药相互作用

    Institute of Scientific and Technical Information of China (English)

    施国兰; 郑博福; 白英臣; 吴丰昌; 吴代赦

    2012-01-01

    为研究氨基甲酸酯类农药在溶解有机质参与下的迁移转化过程,利用荧光猝灭滴定法研究了土壤HS(腐殖质)与氨基甲酸酯类农药的相互作用.结果表明,呋喃丹和西维因的荧光都能不同程度地被FA(富里酸)和HA(腐殖酸)猝灭,主要猝灭机理为静电结合猝灭.采用静态猝灭模型计算出氨基甲酸酯类农药与HS的K(结合常数),lg K由大到小为呋喃丹-HA(4.96)>西维因-HA(4.93)>呋喃丹-FA(4.72)>西维因-FA(4.68).HA与氨基甲酸酯类农药的lgK明显大于FA与氨基甲酸酯类农药,表明HS与氨基甲酸酯类农药间的作用力有疏水作用.进一步研究表明,氢键作用对HS与氨基甲酯类农药结合有一定的影响.%To reveal the mechanisms of transport and conversion of carbamate pesticides in the presence of dissolved organic matters, the fluorescence quenching titration method was applied to investigate the interactions between carbamate pesticides and humic substances in soil. The results showed that the intrinsic fluorescence of carbofuran and carbaryl was quenched by the fulvic and humic acids to varying degrees. Static quenching was the primary mechanism during this process. The binding constants (K) of carbamate pesticides and humic substances were estimated using the fluorescence static quenching model. The order of lg K were: those of carbofuran and humic acid (4. 96) > those of carbaryl and humic acid (4. 93) > those of carbofuran and fulvic acid (4. 72) > those of carbaryl and fulvic acid (4. 68). The values of lg K of carbamate pesticides and humic acids were clearly higher than those of carbamate pesticides and fulvic acids. This result indicated that the hydrophobic force is one of the main interactions between carbamate pesticides and humic substances, and further proved that hydrogen bonding could slightly affect the bonding of carbamate pesticides and humic substances.

  6. Chlorophyll Fluorescence Is a Better Proxy for Sunlit Leaf Than Total Canopy Photosynthesis

    Science.gov (United States)

    Chen, J. M.; Wang, Z.; Zhang, F.; Mo, G.

    2015-12-01

    Chlorophyll fluorescence (CF) results from non-photochemical quenching during plant photosynthesis under excessive radiation. We explore the relationship between gross primary productivity (GPP) and CF using a process ecosystem model, which separates a vegetation canopy into sunlit and shaded leaf groups and simulates the total canopy GPP as the sum of sunlit and shaded leaf GPP. Using GOME-2 and GOSAT data acquired in 2010 over the global land surface, we found that measured CF signals gridded in 1 degree resolution are well correlated with simulated total GPP and its sunlit and shaded components, but the correlation coefficients (R) are largest for the sunlit GPP and smallest for shaded GPP. The seasonal R2 values vary from 0.57 to 0.74, 0.58 to 0.71, and 0.48 to 0.56 for sunlit, total and shaded GPP, respectively. The significance levels for these correlations are all greater than pCASA model results, respectively. These values are similar or larger than those for sunlit GPP simulated in our study, but are considerably larger than those for total GPP in our study because the correlation for total GPP is contaminated by the inclusion of shaded GPP. All these three models use canopy total light use efficiency without considering the differences between sunlit and shaded leaves, and therefore they mostly capture spatio-temporal variations in sunlit GPP. We therefore argue that solar-induced CF measured from vegetation is a better proxy of sunlit GPP than the total GPP, and the use of CF data for assessing the terrestrial carbon cycle can be improved when sunlit and shaded GPP are modelled separately.

  7. [Environmental Effect of Substrate Amelioration on Lake: Effects on Phragmites communis Growth and Photosynthetic Fluorescence Characteristics].

    Science.gov (United States)

    Yu, Ju-hua; Zhong, Ji-cheng; Fan, Cheng-xin; Huang, Wei; Shang, Jing-ge; Gu, Xiao-zhi

    2015-12-01

    Growth of rooted aquatic macrophytes was affected by the nature and composition of lake bottom sediments. Obviously, it has been recognized as an important ecological restoration measure by improving lake substrate and then reestablishing and restoring aquatic macrophytes in order to get rid of the environmental problem of lake. This study simulated five covering thickness to give an insight into the influence of substrate amelioration on Phragmites communis growth and photosynthetic fluorescence characteristics. The results showed that the total biomass, plant height, leaf length and leaf width of Phragmites communis under capping 5 cm were much more significant than those of capping 18 cm (P Phragmites communis , but the growth of control group Phragmites communis was slightly constrained by eutrophicated sediment. In addition, as the capping thickness growing, the underground: shoot biomass ratio of the plant would be reduced dramatically, in order to acquire much more nutrients from sediment for plant growing, the underground biomass of Phragmites communis would be preferentially developed, especially, the biomass of fine root. However, Photosystem II (PS II) photochemical efficiency (Fv/Fm), quantum yield (Yield), photochemical quenching (qP), non-photochemical quenching (qN) of Phragmites communis under different treatments had no significant differences (P > 0.05), furthermore, with much greater capping thickness, the photosynthesis structure of PS II would be much easier destroyed, and PS II would be protected by increasing heat dissipating and reducing leaf photosynthetic area and leaf light-captured pigment contents. In terms of the influence of sediment amelioration by soil exchange on the growth and photosynthetic fluorescence characteristics of Phragmites communis, plant growth could be effectively promoted under capping 2 cm and capping 5 cm by increasing the Eh value and nutrient content, whereas plant under capping 18 cm would be much easier

  8. Quench studies of ILC cavities

    Energy Technology Data Exchange (ETDEWEB)

    Eremeev, Grigory; Geng, Rongli; Palczewski, Ari; Dai, Jin

    2011-07-01

    Quench limits accelerating gradient in SRF cavities to a gradient lower than theoretically expected for superconducting niobium. Identification of the quenching site with thermometry and OST, optical inspection, and replica of the culprit is an ongoing effort at Jefferson Lab aimed at better understanding of this limiting phenomenon. In this contribution we present our finding with several SRF cavities that were limited by quench.

  9. Quenched effective population size

    CERN Document Server

    Sagitov, Serik; Vatutin, Vladimir

    2010-01-01

    We study the genealogy of a geographically - or otherwise - structured version of the Wright-Fisher population model with fast migration. The new feature is that migration probabilities may change in a random fashion. Applying Takahashi's results on Markov chains with random transition matrices, we establish convergence to the Kingman coalescent, as the population size goes to infinity. This brings a novel formula for the coalescent effective population size (EPS). We call it a quenched EPS to emphasize the key feature of our model - random environment. The quenched EPS is compared with an annealed (mean-field) EPS which describes the case of constant migration probabilities obtained by averaging the random migration probabilities over possible environments.

  10. Calculating Quenching Weights

    CERN Document Server

    Salgado, C A; Salgado, Carlos A.; Wiedemann, Urs Achim

    2003-01-01

    We calculate the probability (``quenching weight'') that a hard parton radiates an additional energy fraction due to scattering in spatially extended QCD matter. This study is based on an exact treatment of finite in-medium path length, it includes the case of a dynamically expanding medium, and it extends to the angular dependence of the medium-induced gluon radiation pattern. All calculations are done in the multiple soft scattering approximation (Baier-Dokshitzer-Mueller-Peign\\'e-Schiff--Zakharov ``BDMPS-Z''-formalism) and in the single hard scattering approximation (N=1 opacity approximation). By comparison, we establish a simple relation between transport coefficient, Debye screening mass and opacity, for which both approximations lead to comparable results. Together with this paper, a CPU-inexpensive numerical subroutine for calculating quenching weights is provided electronically. To illustrate its applications, we discuss the suppression of hadronic transverse momentum spectra in nucleus-nucleus colli...

  11. Phenomenology of Holographic Quenches

    Science.gov (United States)

    da Silva, Emilia; Lopez, Esperanza; Mas, Javier; Serantes, Alexandre

    2015-10-01

    We study holographic models related to global quantum quenches in finite size systems. The holographic set up describes naturally a CFT, which we consider on a circle and a sphere. The enhanced symmetry of the conformal group on the circle motivates us to compare the evolution in both cases. Depending on the initial conditions, the dual geometry exhibits oscillations that we holographically interpret as revivals of the initial field theory state. On the sphere, this only happens when the energy density created by the quench is small compared to the system size. However on the circle considerably larger energy densities are compatible with revivals. Two different timescales emerge in this latter case. A collapse time, when the system appears to have dephased, and the revival time, when after rephasing the initial state is partially recovered. The ratio of these two times depends upon the initial conditions in a similar way to what is observed in some experimental setups exhibiting collapse and revivals.

  12. Potential use of the PRI and active fluorescence for the diagnosis of the physiological state of plants under ozone exposure and high atmospheric vapor pressure deficit.

    Science.gov (United States)

    Merlier, Elodie; Hmimina, Gabriel; Bagard, Matthieu; Dufrêne, Eric; Soudani, Kamel

    2017-08-09

    Assessing photosynthesis rates with remote sensing is important for tracking the physiological state of plants. The photochemical reflectance index (PRI) is a good estimator of short-term light-use efficiency (LUE) at the leaf scale but its responses to environmental factors are poorly understood. In this study, we assessed changes in the responses of the PRI to ozone exposure and to an increase in atmospheric drought (separately and combined) in oak (Quercus robur) and holm oak (Quercus ilex) that were planted in climatic cells under controlled conditions. The aim was to evaluate the ability of the PRI as a relevant indicator to assess the impact of abiotic factors on photosynthesis. Leaf-scale measurements of biochemical, physiological and spectral properties, including the PRI in dim light on dark-adapted leaves (PRI0), kinetics of PRI responses to PAR variations (photosynthetically active radiation), and leaf chlorophyll fluorescence parameters were performed. The results show that PRI0 is a good proxy of the leaf chlorophyll content, and is correlated to chlorophyll fluorescence parameters on dark adapted leaves (Fo, Fm). The correction of the PRI from the leaf chlorophyll content variations (PRIc) significantly improves correlations between the PRI and NPQ (non-photochemical quenching). The variability of PARsat (estimated PAR value at PRI saturation using PRI vs. PAR relationships) depends on ozone exposure and on the increase in atmospheric vapor pressure deficit. For Quercus robur, results highlight that PARsat is linked to abiotic stress indicating that the PRI may be used as a relevant indicator of abiotic factors limiting the photosynthesis. Quercus ilex did not show significant variability in PRI0 and PARsat, which suggest that it is a more drought resistant species than Q. robur.

  13. Non-invasive, whole-plant imaging of chloroplast movement and chlorophyll fluorescence reveals photosynthetic phenotypes independent of chloroplast photorelocation defects in chloroplast division mutants.

    Science.gov (United States)

    Dutta, Siddhartha; Cruz, Jeffrey A; Jiao, Yuhua; Chen, Jin; Kramer, David M; Osteryoung, Katherine W

    2015-10-01

    Leaf chloroplast movement is thought to optimize light capture and to minimize photodamage. To better understand the impact of chloroplast movement on photosynthesis, we developed a technique based on the imaging of reflectance from leaf surfaces that enables continuous, high-sensitivity, non-invasive measurements of chloroplast movement in multiple intact plants under white actinic light. We validated the method by measuring photorelocation responses in Arabidopsis chloroplast division mutants with drastically enlarged chloroplasts, and in phototropin mutants with impaired photorelocation but normal chloroplast morphology, under different light regimes. Additionally, we expanded our platform to permit simultaneous image-based measurements of chlorophyll fluorescence and chloroplast movement. We show that chloroplast division mutants with enlarged, less-mobile chloroplasts exhibit greater photosystem II photodamage than is observed in the wild type, particularly under fluctuating high levels of light. Comparison between division mutants and the severe photorelocation mutant phot1-5 phot2-1 showed that these effects are not entirely attributable to diminished photorelocation responses, as previously hypothesized, implying that altered chloroplast morphology affects other photosynthetic processes. Our dual-imaging platform also allowed us to develop a straightforward approach to correct non-photochemical quenching (NPQ) calculations for interference from chloroplast movement. This correction method should be generally useful when fluorescence and reflectance are measured in the same experiments. The corrected data indicate that the energy-dependent (qE) and photoinhibitory (qI) components of NPQ contribute differentially to the NPQ phenotypes of the chloroplast division and photorelocation mutants. This imaging technology thus provides a platform for analyzing the contributions of chloroplast movement, chloroplast morphology and other phenotypic attributes to the

  14. Study on Energy Transfer in Fluorescein-Eosin Y System and the Fluorescence Quenching Method for Determination of Trace Protein%荧光素-曙红Y能量转移荧光猝灭法测定微量白蛋白研究

    Institute of Scientific and Technical Information of China (English)

    汪鲁; 宋桂兰

    2012-01-01

    In the condition of λex/λem = 405/547 nm and with the existence of buffer solution and surfactant, an effective energy transfer could take place between fluorescein and eosin Y, and the fluorescence intensity of eosin Y is quenched with the addition of BSA. The energy transfer fluorescence quenching was used to determine trace BSA. The best conditions of fluorescence quenching of fluorescein-eosin Y system were as follow;2. 0 mL B-R buffer solution with pH = 3. 8,0. 4 mL 0. 05% triton X-100,1. 5 mL 1. 0 × 10-4 mol/L fluorescein solution and 2. 0 mL 1. 0 ×μ 10-4 mol/L Eosin Y solution. The reaction time and the order of reagent addition were studied systematically in this paper. The influences of coexistent substances were also explored. Under the optimized experimental conditions,the fluorescence quenching value was linearly proportional to the amount of BSA in the range of 0~2. 0 (ig/mL. The detection limit was 6. 6 ng/mL. RSD in the determination of samples was within ±5% and the recovery was 90. 4%~95. 3%. This method was applied to the determination of protein content of human serum and milk samples with satisfying results.%在λex/λem=405/547 nm,于缓冲溶液和表面活性剂存在的情况下,荧光素和曙红Y能够发生有效能量转移,而牛血清白蛋白( BSA)的加入使得曙红Y荧光猝灭,该体系可用于微量蛋白质的测定.系统探讨了荧光素-曙红Y能量转移体系发生荧光猝灭的条件,最佳条件为:2.0 mL pH=3.8的B-R缓冲溶液,0.4 mL 0.05%曲拉通X100,1.5 mL1.0×10-4 mol/L的荧光素水溶液,2.0mL1.0×10-4 mol/L的曙红Y水溶液,最佳实验时间为溶液配制完成静置15 min后60 min内,最佳加入顺序为pH=3.8缓冲溶液+荧光素+曙红Y+曲拉通+蛋白质标准溶液或样品.在优化的实验条件下,蛋白质含量在0~2.0 μg/mL范围内与荧光猝灭强度呈良好的线性关系.检出限为6.6 ng/mL;测定样品的相对标准偏差(RSD)在±5%以内

  15. Design of Industrial Quenching Processes

    Institute of Scientific and Technical Information of China (English)

    Nikolai. I. KOBASKO; George .E. TOTTEN

    2004-01-01

    The method of designing industrial processes of quench cooling, in particular, the speed of the conveyor movement with regard to shape and sizes of parts to be quenched, thermal and physical properties of material and cooling capacity of quenchants has been developed. The suggested designing method and databases are the basis for the complete automation of industrial processes of quench cooling, especially for continuous conveyor lines, with the purpose of making high-strength materials. The process is controlled by infrared technique.

  16. [Effects of controlled-release fertilizer on chrysanthemum leaf chlorophyll fluorescence characteristics and ornamental quality].

    Science.gov (United States)

    Song, Xu-xu; Zheng, Cheng-shu; Sun, Xia; Ma, Hai-yan

    2011-07-01

    Taking cut flower chrysanthemum 'Baima' as test material, a pot experiment was conducted to study the effects of controlled-release fertilizer on the leaf chlorophyll fluorescence parameters, chlorophyll and nutrient contents, and ornamental quality of chrysanthemum. Under no fertilization, the maximal photochemical efficiency of PS II in dark (F(v)/F(m)), potential photochemical efficiency of PS II (F(v)/F(0)), and quantum yield of PS II electron transport (phi(PS II)) decreased significantly, compared with those under fertilization. With the application of conventional compound fertilizers CCFA (N:P:K=20:8:10) and CCFB (N:P:K= 14:14:14), the F(v)/F(m), F(v)/F(0) and phi(PS II) had a slight increase in early period (30-60 d) but a remarkable decrease in mid and later periods (75 - 120 d), compared with those under the application of controlled-release fertilizers CRFA (N:P:K = 20:8:10) and CRFB (N:P:K= 14:14:14). Under the application of CRFA, the F(v)/F(m), phi(PS II), and photochemical quenching (q(P)) had somewhat increase, as compared with the application of CRFB. The non-photochemical quenching (NPQ) under the application of CRFA and CRFB decreased significantly, compared with that under the application of CCFA and CCFB and the control. The chlorophyll content had a similar change trend with F(v)/F(m), F(v)/F(0), and phi(PS II). The leaf N, P, and K contents, flower stalk length and stalk diameter, flower diameter, and flower fresh and dry mass at harvest stage all increased under the application of CRFA and CRFB, compared with those under the application of CCFA and CCFB and the control, and the flower fresh and dry mass was significantly higher under the application of CRFA than of CRFB. This study showed that controlled-release fertilizer could improve the ornamental quality of chrysanthemum via improving the leaf chlorophyll content, photochemical transduction rate, and nutrient uptake, and CRFA had better effects than CRFB.

  17. Determination of Rutin in FlosSophorae by Bovine Serum Albumin Fluorescence Quenching Method%表面活性剂增敏——牛血清白蛋白荧光猝灭法测定槐花中芦丁含量

    Institute of Scientific and Technical Information of China (English)

    刘桂林; 杨慧仙; 魏竞智

    2011-01-01

    Objective: To investigate a new method to decte the rutin in flos sophorae by fluorescence quenching of bovine serum albumin.Methods: The Bovine serum albumin (BSA) has a strong intrinsic fluorescence because oftryptophan and tyrosine.The fluorescebce intensity of BSA decreased when the rutin combination with the BSA, and surface-active agent tween -80 (T-80) inhanced the fluorescence quenching on the system.In a certain range, the fluorescence quenching of BSA in the λ ex = 338 nm has a good linear relationship with the concentration of rutin.The new method to detect the rutin in flos sophoraes was established.Results: The conjugate of BAS and rutin had a max fluorescebec value at 338 nm which was found the decreased intensity of fluorescence at 338nm was proportion to rutin in the range of 6× 10-7~3.0× 10-5 mol·L-1.The linear regression equation was △ F=136.36 CRu(× 10-5 mol ·L-1)-0.5454 with a correlation coefficient of 0.9976.The detection limit was 1.58× 10-7 mol ·L-1.The relative standard deviation was 2.8%~4.3% and the average recovery of sample was 97.6%~101.2%.Conclusion: The method was simple and rapid.It can be applied to detect the trace rutin in flos sophorae with satisfactory results.%目的:应用牛血清白蛋白荧光猝灭法建立一种测定槐花中芦丁含量的新方法.方法:牛血清白蛋白(BSA)具有很强的内源荧光性,而芦丁溶液本身不产生荧光.当芦丁与BSA结合后,会导致其荧光强度下降,表面活性剂吐温-80(T-80)对体系有促进荧光猝灭作用.BSA在λex=338nm处的荧光猝灭程度与芦丁的量在一定浓度范围内呈良好的线性关系,据此建立测定槐花中芦丁含量的新方法.结果:该结合物的最大发射波长为λmax=338nm,与芦丁摩尔浓度在6× 10-7~3.0× 10-5 mol·L-1范围内线性关系良好.其线性回归方程为△F=136.36 CRu(× 10-5mol·L-1)-0.5454,相关系数r=0.9976,检出限为1.58× 10-7mol·L-1,RSD为2.8%~4.3%,

  18. Fluorescence Quenching Method for the Determination of Analgin and Metabolin with Some Aromatic Amino Acids as Probes%某些芳香族氨基酸作探针荧光猝灭法测定安乃近及其代谢产物

    Institute of Scientific and Technical Information of China (English)

    甘晓娟; 刘绍璞; 刘忠芳; 王亚琼; 崔志平; 胡小莉

    2012-01-01

    在pH 3.2的缓冲介质中,安乃近(ANG)及其代谢产物4-甲氨基安替比林(MAA)、4-乙酰氨基安替比林(AAA)与色氨酸(Trp)、酪氨酸(Tyr)和苯丙氨酸(Phe)等芳香族氨基酸反应并形成结合产物,引起上述氨基酸的荧光发生猝灭,最大猝灭波长分别位于352 nm(ANG-Trp体系)、304 nm(ANG-Tyr,MAA-Tyr和AAA-Tyr体系)和284 nm(ANG-Phe体系).其荧光猝灭值(ΔF)在一定范围内与ANG,MAA和AAA成正比.荧光猝灭反应具有较高灵敏度,对于ANG,MAA和AAA的检出限为13.3 ng/mL(ANG-Trp体系)、15.8 ng/mL(ANG-Tyr体系)、64.5 ng/mL(ANG-Phe体系)、150.0 ng/mL(MAA-Tyr体系)和230.8 ng/mL(AAA-Tyr体系).实验研究了荧光猝灭反应的适宜条件和影响因素,考察了共存物质的影响,表明方法具有良好的选择性,可用于ANG片剂及其代谢物尿药浓度的快速测定.从吸收光谱的变化、温度的影响以及Stern-Volmer作图,判断该反应为静态猝灭反应,氨基酸和安乃近通过静电引力和芳基堆积作用而形成1∶1的复合物.%In pH 3.2 Britton-Robinson(BR) buffer medium,analgin(ANG) and metabolin of 4-methylaminoantipyrine(MAA) and 4-acetylaminoantipyrine(AAA) can react with some aromatic amino acids such as tryptophane(Trp),tyrosine(Tyr) and phenylalanine(Phe) to form complexes,which lead to fluorescence quenching of above amino acids,and the maximum quenching wavelength is at 352 nm(ANG-Trp system),304 nm(ANG-Tyr,MAA-Tyr and AAA-Tyr system),284 nm(ANG-Phe system),re-spectively.Fluorescence quenching value(ΔF) is proportional to the concentration of ANG,MAA and AAA in a certain range.Fluorescence quenching methods for the determination of ANG,MAA and AAA have high sensitivity with the detection limits of 13.3 ng/mL(Trp-ANG system),15.8 ng/mL(Tyr-ANG system),64.5 ng/mL(Phe-ANG system),150.0 ng/mL(MAA-Tyr system) and 230.8 ng

  19. 荧光猝灭法测定高粱原花青素-金属离子络合反应%The determining of complexation reaction between Sorghum bicolor Moench proanthocyanidin and metal ions by method of fluorescence quenching

    Institute of Scientific and Technical Information of China (English)

    张亮亮; 徐曼; 汪咏梅; 胡新宇

    2016-01-01

    Proanthocyanidins (epicatechin16(4➝8) catechin, PC) from Sorghum bicolor Moench are a class of polyphe⁃nol compounds widely distributed in higher plants with good physiological and pharmacological effects. It is well known that both procyanidin monomers and oligomers have the capacity to chelate with metal ions. However the studies on the metal⁃chelating capacity of proanthocyanidins with high molecular weight have been little reported hitherto due to the dif⁃ficulty in obtaining these proanthocyanidins from the natural products. The fluorescence quenching effects of polyphenolic compounds epicatechin16(4➝8) catechin by metal cations Al3+, Cu2+, Sn2+and Zn2+were studied at pH 6 by measuring fluorescence quenching spectra. To measure fluorescence, 1μL of 0�5 mmol/L metal ions solution were titrated into 100μL of 0�5 mmol/L polyphenolic compounds solution in 2 900μL pH 6 acetate buffer solution. The volume of metal ions solution was varied from 0μL to 10μL with the final concentration of 1�67μmol/L. The results indicated that an obvi⁃ous quenching effect on PC fluorescence intensity by Al3+, Cu2+, Sn2+and Zn2+ was observed, indicating the interaction between metal ions and PC. Continue adding more Sn2+, Al3+, Cu2+ and Zn2+ ions into solution caused a gradual de⁃crease in the PC fluorescence intensity without changes of the maximum emission wavelength and shape of the peaks, which was interpreted that Al3+, Cu2+, Sn2+ and Zn2+ could quench the intrinsic fluorescence of PC. The Stern⁃Volmer equation was used to assessment of the Stern⁃Volmer constants ( Ksv ) between metal ions and PC. The results shown the metal Stern⁃Volmer constants of metal ions Al3+, Cu2+, Sn2+, Zn2+ for PC were 1�35, 0�32, 1�44, and 0�29 ( × 106 L/mol) , respectively. The stoichiometry of the metal ions binding to PC was determined using the method of continuous variations. Fluorescence quenching titration with metal ions have revealed that the

  20. Heavy atom quenched coumarin probes for sensitive and selective detection of biothiols in living cells.

    Science.gov (United States)

    Ji, Wengang; Ji, Yuzhuo; Jin, Qingqing; Tong, Qingxiao; Tang, Xinjing

    2015-07-07

    A series of turn-on fluorescent probes with halogen acetyl amide at the 3-position of coumarin derivatives were synthesized. Fluorescence of these probes was efficiently quenched by heavy halogen atoms (Br and I, not Cl), which could be successfully used for selective detection of biothiols with the sensitivity of Cys > GSH > Hcy and much higher than thiol containing proteins. These represent the smallest fluorescence quenchers in designing fluorescent probes for detecting both endogenous and exogenous biothiols in living cells.

  1. Entrapment in phospholipid vesicles quenches photoactivity of quantum dots

    Directory of Open Access Journals (Sweden)

    Generalov R

    2011-09-01

    Full Text Available Roman Generalov1,2, Simona Kavaliauskiene1, Sara Westrøm1, Wei Chen3, Solveig Kristensen2, Petras Juzenas11Department of Radiation Biology, Institute for Cancer Research, Norwegian Radium Hospital, Oslo University Hospital, Oslo, Norway; 2School of Pharmacy, University of Oslo, Oslo, Norway; 3Department of Physics, The University of Texas at Arlington, Arlington, TX, USAAbstract: Quantum dots have emerged with great promise for biological applications as fluorescent markers for immunostaining, labels for intracellular trafficking, and photosensitizers for photodynamic therapy. However, upon entry into a cell, quantum dots are trapped and their fluorescence is quenched in endocytic vesicles such as endosomes and lysosomes. In this study, the photophysical properties of quantum dots were investigated in liposomes as an in vitro vesicle model. Entrapment of quantum dots in liposomes decreases their fluorescence lifetime and intensity. Generation of free radicals by liposomal quantum dots is inhibited compared to that of free quantum dots. Nevertheless, quantum dot fluorescence lifetime and intensity increases due to photolysis of liposomes during irradiation. In addition, protein adsorption on the quantum dot surface and the acidic environment of vesicles also lead to quenching of quantum dot fluorescence, which reappears during irradiation. In conclusion, the in vitro model of phospholipid vesicles has demonstrated that those quantum dots that are fated to be entrapped in endocytic vesicles lose their fluorescence and ability to act as photosensitizers.Keywords: fluorescence lifetime, free radicals, liposomes, lipodots, reactive oxygen species

  2. A study of the interaction between fluoroquinolone antibiotics and proteins by fluorescence quenching measurements%氟喹诺酮类药物与蛋白质相互作用的研究

    Institute of Scientific and Technical Information of China (English)

    何疆; 吴淑清; 李凤霞; 陈兴国; 胡之德

    2004-01-01

    运用荧光淬灭机理研究了氟喹诺酮类药物洛美沙星,氧氟沙星,衣诺沙星与3种蛋白质(牛血清蛋白,免疫球蛋白,胰蛋白酶)之间的相互作用.计算了两者之间的结合常数和结合位点数,根据实验当中所得的热力学参数确定了它们之间的作用类型.氟喹诺酮类药物的含量与其荧光强度呈现良好的线性关系,在此实验条件下测定了胶囊及人工合成样中洛美沙星和衣诺沙星的含量,其浓度范围分别为0.018~0.878和0.030~3.171μg/mL.%The results from the fluorescence spectra studies showed the binding characteristics of fluoroquinolone antibiotics including lomefloxacin(Lome), ofloxacin(OF) and enoxacin(Enox) with three proteins, bovine serum albumin(BSA), human immunoglobulin G(IgG) and trypsin. The binding constant K and the number of binding sites n were also calculated. Meanwhile, the determination method for the fluoroquinolones in the capsule and the artificial synthetic samples were studied due to their intense fluorescence related to the macrocyclic-aromatic structures. The results showed a good linear relationship between fluorescence intensities and the concentrations of fluoroquinolones. The concentration ranges of Lome and Enox are 0.018~0.878μg/mL and 0.030~3.171μg/mL, respectively.

  3. 间作遮荫对花生光合作用及叶绿素荧光特性的影响%Effect of Shading on Photosynthesis and Chlorophyll Fluorescence Characteristic of Peanut under Different Inter-row Space in Cassava-peanut Intercropping

    Institute of Scientific and Technical Information of China (English)

    唐秀梅; 唐荣华; 钟瑞春; 揭红科; 刘超; 王泽平; 韩柱强; 蒋菁; 贺梁琼; 李忠

    2011-01-01

    以花生单作为对照,设置30、35、40、45、50 cm 5个木薯花生间作行距,播种90d后测定花生叶片的净光合速率、叶绿素含量及叶绿素荧光参数.结果表明,与单作对照相比,间作花生的光合速率(Pn)、叶绿素含量(Chl a+b)、初始荧光(Fo)、光化学猝灭系数(qP)降低;最大荧光(Fm)、可变荧光(Fv)、最大光化学效率(Fv/ Fm)、潜在光化学活性(Fv/Fo)、非光化学淬灭系数(qN)升高;且窄行距(30~35 cm)处理的Pn、Fv、Fv/Fm、Fv/Fo、表观光合电子传递速率(ETR)、实际光化学量子效率(Yield)高于宽行距(45~50cm)处理.间作遮荫使花生功能叶片的光合速率和叶绿素含量降低,叶绿素荧光参数的一系列变化是花生对间作遮荫的适应性反应.%The net photosynthetic rate, chlorophyll content and chlorophyll fluorescence characteristic of peanut (Arachis hypogaea L. ) were determined under different inter-row space of cassava/peanut intercropping (30, 35, 40, 45, 50 cm) and monocropping in the field after 90 d of sowing. The result showed that the net photosynthetic rate and chlorophyll ( Chi a + b) content, initial fluorescence ( Fo) , photochemical quenching (qP) in leaves of peanut intercropped with cassava decreased. However, the maximum fluorescence (Fm) , variable fluorescence (Fv) , maximum photochemical efficiency (Fv/Fm), potential activity of photosystem II {Fv/Fo, non-photochemical quenching (qN) of intercropped peanut increased. Moreover, Pn, Fv, Fv/Fm , Fv/ Fo, apparent electron transport rates (£77?) and effective quantum yield of photosystem II ( Yield) of peanut intercropped under 30 - 35 cm inter-row treatment were more than those under 40-45 cm row space. In conclusion, the shading of intercropping decreased net photosynthetic rate and chlorophyll content of peanut in leaves, and these changes of chlorophyll fluorescence characteristic showed that peanut had flexibility to shading stress under intercropping.

  4. Rate Constants of PSII Photoinhibition and its Repair, and PSII Fluorescence Parameters in Field Plants in Relation to their Growth Light Environments.

    Science.gov (United States)

    Miyata, Kazunori; Ikeda, Hiroshi; Nakaji, Masayoshi; Kanel, Dhana Raj; Terashima, Ichiro

    2015-09-01

    The extent of photoinhibition of PSII is determined by a balance between the rate of photodamage to PSII and that of repair of the damaged PSII. It has already been indicated that the rate constants of photodamage (kpi) and repair (krec) of the leaves differ depending on their growth light environment. However, there are no studies using plants in the field. We examined these rate constants and fluorescence parameters of several field-grown plants to determine inter-relationships between these values and the growth environment. The kpi values were strongly related to the excess energy, EY, of the puddle model and non-regulated energy dissipation, Y(NO), of the lake model, both multiplied by the photosynthetically active photon flux density (PPFD) level during the photoinhibitory treatment. In contrast, the krec values corrected against in situ air temperature were very strongly related to the daily PPFD level. The plants from the fields showed higher NPQ than the chamber-grown plants, probably because these field plants acclimated to stronger lightflecks than the averaged growth PPFD. Comparing chamber-grown plants and the field plants, we showed that kpi is determined by the incident light level and the photosynthetic capacities such as in situ rate of PSII electron transport and non-photochemical quenching (NPQ) [e.g. Y(NO)×PPFD] and that krec is mostly determined by the growth light and temperature levels. © The Author 2015. Published by Oxford University Press on behalf of Japanese Society of Plant Physiologists. All rights reserved. For permissions, please email: journals.permissions@oup.com.

  5. Entrapment in phospholipid vesicles quenches photoactivity of quantum dots.

    Science.gov (United States)

    Generalov, Roman; Kavaliauskiene, Simona; Westrøm, Sara; Chen, Wei; Kristensen, Solveig; Juzenas, Petras

    2011-01-01

    Quantum dots have emerged with great promise for biological applications as fluorescent markers for immunostaining, labels for intracellular trafficking, and photosensitizers for photodynamic therapy. However, upon entry into a cell, quantum dots are trapped and their fluorescence is quenched in endocytic vesicles such as endosomes and lysosomes. In this study, the photophysical properties of quantum dots were investigated in liposomes as an in vitro vesicle model. Entrapment of quantum dots in liposomes decreases their fluorescence lifetime and intensity. Generation of free radicals by liposomal quantum dots is inhibited compared to that of free quantum dots. Nevertheless, quantum dot fluorescence lifetime and intensity increases due to photolysis of liposomes during irradiation. In addition, protein adsorption on the quantum dot surface and the acidic environment of vesicles also lead to quenching of quantum dot fluorescence, which reappears during irradiation. In conclusion, the in vitro model of phospholipid vesicles has demonstrated that those quantum dots that are fated to be entrapped in endocytic vesicles lose their fluorescence and ability to act as photosensitizers.

  6. Gas exchange and chlorophyll fluorescence of pea (Pisum sativum L.) plants in response to ambient ozone at a rural site in Egypt

    Energy Technology Data Exchange (ETDEWEB)

    Ismail, I.M.; Basahi, J.M. [Air Pollution Laboratory (APL), Centre of Excellence in Environmental Studies (CEES), King Abdulaziz University, P. O. Box 80216, Jeddah 21589 (Saudi Arabia); Hassan, I.A., E-mail: ihassan_eg@yahoo.com [Air Pollution Laboratory (APL), Centre of Excellence in Environmental Studies (CEES), King Abdulaziz University, P. O. Box 80216, Jeddah 21589 (Saudi Arabia); Department of Botany, Faculty of Science, Alexandria University, 21526 El Shatby, Alexandria (Egypt)

    2014-11-01

    Egyptian pea cultivars (Pisum sativum L. cultivars Little Marvel, Perfection and Victory) grown in open-top chambers were exposed to either charcoal-filtered (FA) or non-filtered air (NF) for five consecutive years (2009–2013) at a rural site in northern Egypt. Net photosynthetic rates (P{sub N}), stomatal conductance (g{sub s}), intercellular CO{sub 2} (C{sub i}) and chlorophyll fluorescence were measured. Ozone (O{sub 3}) was found to be the most prevalent pollutant common at the rural site and is suspected to be involved in the alteration of the physiological parameters measured in the present investigation. P{sub N} of different cultivars were found to respond similarly; decreases of 23, 29 and 39% were observed in the cultivars Perfection, Little Marvel and Victory, respectively (averaged over the five years) due to ambient O{sub 3}. The maximum impairment in P{sub N} was recorded in the cultivar Victory (46%) in 2013 when the highest O{sub 3} levels were recorded (90 nL L{sup −1}). The average stomatal conductance decreased by 20 and 18% in the cultivars Little Marvel and Perfection, respectively, while the average stomatal conductance increased on average by 27% in the cultivar Victory. A significant correlation was found between P{sub N} and C{sub i}, indicating the importance of non-stomatal limitations of photosynthesis, especially in the cultivar Victory. The P{sub N} vs. Ci curves were fitted to a non-rectangular hyperbolic model. The actual quantum yield (Φ{sub PSII}) and photochemical quenching coefficient (qP) were significantly decreased in the leaves of plants exposed to NF air. Non-photochemical quenching (NPQ) was increased in all cultivars. Exposure to NF air caused reductions in chlorophyll (Chl a) of 19, 16 and 30% in the Little Marvel, Perfection and Victory cultivars, respectively. - Highlights: • Ozone (O{sub 3}) concentrations recorded were within the ranges of phytotoxicity. • O{sub 3} has a clear influence on the physiological

  7. Discrimination between FRET and non-FRET quenching in a photochromic CdSe quantum dot/dithienylethene dye system

    Science.gov (United States)

    Dworak, Lars; Reuss, Andreas J.; Zastrow, Marc; Rück-Braun, Karola; Wachtveitl, Josef

    2014-11-01

    A photochromic Förster resonance energy transfer (FRET) system was employed to disentangle the fluorescence quenching mechanisms in quantum dot/photochromic dye hybrids. In the off-state of the dye the main quenching mechanism is FRET whereas the moderate quenching in the on-state is due to non-FRET pathways opened up upon assembly.A photochromic Förster resonance energy transfer (FRET) system was employed to disentangle the fluorescence quenching mechanisms in quantum dot/photochromic dye hybrids. In the off-state of the dye the main quenching mechanism is FRET whereas the moderate quenching in the on-state is due to non-FRET pathways opened up upon assembly. Electronic supplementary information (ESI) available: QD and DTE synthesis, preparation of the DTE/QD coupled system, TEM image of the nanocrystals and experimental details. See DOI: 10.1039/c4nr05144k

  8. Holographic Quenches with a Gap

    CERN Document Server

    da Silva, Emilia; Mas, Javier; Serantes, Alexandre

    2016-01-01

    In order to holographically model quenches with a gapped final hamiltonian, we consider a gravity-scalar theory in anti-de Sitter space with an infrared hard wall. We allow a time dependent profile for the scalar field at the wall. This induces an energy exchange between bulk and wall and generates an oscillating scalar pulse. We argue that such backgrounds are the counterpart of quantum revivals in the dual field theory. We perform a qualitative comparison with the quench dynamics of the massive Schwinger model, which has been recently analyzed using tensor network techniques. Agreement is found provided the width of the oscillating scalar pulse is inversely linked to the energy density communicated by the quench. We propose this to be a general feature of holographic quenches.

  9. Holographic quenches with a gap

    Science.gov (United States)

    da Silva, Emilia; Lopez, Esperanza; Mas, Javier; Serantes, Alexandre

    2016-06-01

    In order to holographically model quenches with a gapped final hamiltonian, we consider a gravity-scalar theory in anti-de Sitter space with an infrared hard wall. We allow a time dependent profile for the scalar field at the wall. This induces an energy exchange between bulk and wall and generates an oscillating scalar pulse. We argue that such backgrounds are the counterpart of quantum revivals in the dual field theory. We perform a qualitative comparison with the quench dynamics of the massive Schwinger model, which has been recently analyzed using tensor network techniques. Agreement is found provided the width of the oscillating scalar pulse is inversely linked to the energy density communicated by the quench. We propose this to be a general feature of holographic quenches.

  10. Luminescence quenching effect for the interaction of prulifloxacin with trypsin-Britton-Robinson buffer solution system

    Energy Technology Data Exchange (ETDEWEB)

    Huang Yabei; Liu Benzhi; Yu Zhang [School of Chemistry and Materials Science, Huaibei Coal Normal College, Huaibei 235000 (China); Zi Yanqin, E-mail: ziyanqin@163.co [School of Chemistry and Materials Science, Huaibei Coal Normal College, Huaibei 235000 (China)

    2010-03-15

    Prulifloxacin is a kind of new oral taking antibiotic of fluoroquinolone. Conjugation reaction of prulifloxacin with trypsin in Britton-Robinson buffer solution of pH 7.96 was analyzed by UV-vis spectrophotometry and fluorescence spectrometry. The intrinsic fluorescence of trypsin was strongly quenched by prulifloxacin. This effect was rationalized in terms of a static quenching procedure. The binding parameters have been evaluated by fluorescence quenching methods. Negative values DELTAG{sup 0} for the formation of prulifloxacin-trypsin complex implied that both hydrogen bonds and hydrophobic interactions might play a significant role in prulifloxacin binding to trypsin. The binding distance deduced from the efficiency of energy transfer was 0.84 nm for prulifloxacin-trypsin. Furthermore, association constants and binding mechanism were successfully derived from the fluorescence spectra. UV-vis detections supported a change in the secondary structure of proteins caused by the interaction of prulifloxacin with trypsin.

  11. Trocas gasosas e fluorescência da clorofila em seis cultivares de cafeeiro sob estresse de alumínio Gas exchange and chlorophyll fluorescence in six coffee cultivars under aluminum stress

    Directory of Open Access Journals (Sweden)

    Maria Luiza Freitas Konrad

    2005-01-01

    suggesting structural damage in thylakoid. The photosynthetic induction curve revealed that Al caused decreases in photochemical quenching of fluorescence as well as increases of non-photochemical quenching. Our results indicated that A reduction was related to decreases in both stomatal conductance, and biochemical and photochemical damages.

  12. The quenching time scale and quenching rate of galaxies

    CERN Document Server

    Lian, Jianhui; Zhang, Kai; Kong, Xu

    2016-01-01

    The average star formation rate (SFR) in galaxies has been declining since redshift of 2. A fraction of galaxies quench and become quiescent. We constrain two key properties of the quenching process: the quenching time scale and the quenching rate among galaxies. We achieve this by analyzing the galaxy number density profile in NUV-u color space and the distribution in NUV-u v.s. u-i color-color diagram with a simple toy-model framework. We focus on galaxies in three mass bins between 10 to 10 and 10 to 10.6 solar mass. In the NUV-u v.s. u-i color-color diagram, the red u-i galaxies exhibit a different slope from the slope traced by the star-forming galaxies. This angled distribution and the number density profile of galaxies in NUV-u space strongly suggest that the decline of the SFR in galaxies has to accelerate before they turn quiescent. We model this color-color distribution with a two-phase exponential decline star formation history. The models with an e-folding time in the second phase (the quenching p...

  13. Fluoresence quenching of riboflavin in aqueous solution by methionin and cystein

    Energy Technology Data Exchange (ETDEWEB)

    Droessler, P.; Holzer, W.; Penzkofer, A.; Hegemann, P

    2003-01-15

    The fluorescence quantum distributions, fluorescence quantum yields, and fluorescence lifetimes of riboflavin in methanol, DMSO, water, and aqueous solutions of the sulphur atom containing amino acids methionin and cystein have been determined. In methanol, DMSO, and water (pH=4-8) only dynamic fluorescence reduction due to intersystem crossing and internal conversion is observed. In aqueous methionin solutions of pH=5.25-9 a pH independent static and dynamic fluorescence quenching occurs probably due to riboflavin anion-methionin cation pair formation. In aqueous cystein solutions (pH range from 4.15 to 9) the fluorescence quenching increases with rising pH due to cystein thiolate formation. The cystein thiol form present at low pH does not react with neutral riboflavin. Cystein thiolate present at high pH seems to react with neutral riboflavin causing riboflavin deprotonation (anion formation) by cystein thiolate reduction to the cystein thiol form.

  14. Fluoresence quenching of riboflavin in aqueous solution by methionin and cystein

    Science.gov (United States)

    Drössler, P.; Holzer, W.; Penzkofer, A.; Hegemann, P.

    2003-01-01

    The fluorescence quantum distributions, fluorescence quantum yields, and fluorescence lifetimes of riboflavin in methanol, DMSO, water, and aqueous solutions of the sulphur atom containing amino acids methionin and cystein have been determined. In methanol, DMSO, and water (pH=4-8) only dynamic fluorescence reduction due to intersystem crossing and internal conversion is observed. In aqueous methionin solutions of pH=5.25-9 a pH independent static and dynamic fluorescence quenching occurs probably due to riboflavin anion-methionin cation pair formation. In aqueous cystein solutions (pH range from 4.15 to 9) the fluorescence quenching increases with rising pH due to cystein thiolate formation. The cystein thiol form present at low pH does not react with neutral riboflavin. Cystein thiolate present at high pH seems to react with neutral riboflavin causing riboflavin deprotonation (anion formation) by cystein thiolate reduction to the cystein thiol form.

  15. Universality in fast quantum quenches

    CERN Document Server

    Das, Sumit R; Myers, Robert C

    2014-01-01

    We expand on the investigation of the universal scaling properties in the early time behaviour of fast but smooth quantum quenches in a general $d$-dimensional conformal field theory deformed by a relevant operator of dimension $\\Delta$ with a time-dependent coupling. The quench consists of changing the coupling from an initial constant value $\\lambda_1$ by an amount of the order of $\\delta \\lambda$ to some other final value $\\lambda_2$, over a time scale $\\delta t$. In the fast quench limit where $\\delta t$ is smaller than all other length scales in the problem, $ \\delta t \\ll \\lambda_1^{1/(\\Delta-d)}, \\lambda_2^{1/(\\Delta-d)}, \\delta \\lambda^{1/(\\Delta-d)}$, the energy (density) injected into the system scales as $\\delta{\\cal E} \\sim (\\delta \\lambda)^2 (\\delta t)^{d-2\\Delta}$. Similarly, the change in the expectation value of the quenched operator at times earlier than the endpoint of the quench scales as $\\langle {\\cal O}_\\Delta\\rangle \\sim \\delta \\lambda\\, (\\delta t)^{d-2\\Delta}$, with further logarithmic...

  16. Chiral Logs in Quenched QCD

    CERN Document Server

    Dong, S J; Horváth, I; Lee, F X; Liu, K F; Mathur, N; Zhang, J B

    2003-01-01

    The quenched chiral logs are examined on a $16^3 \\times 28$ lattice with Iwasaki gauge action and overlap fermions. The pion decay constant $f_{\\pi}$ is used to set the lattice spacing, $a = 0.200(3)$ fm. With pion mass as low as $\\sim 180 {\\rm MeV}$, we see the quenched chiral logs clearly in $m_{\\pi}^2/m$ and $f_P$, the pseudoscalar decay constant. We analyze the data to determine how low the pion mass needs to be in order for the quenched one-loop chiral perturbation theory ($\\chi$PT) to apply. With the constrained curve fitting, we are able to extract the quenched chiral log parameter $\\delta$ together with the chiral cutoff $\\Lambda_{\\chi}$ and other parameters. Only for $m_{\\pi} \\leq 300 {\\rm MeV}$ do we obtain a consistent and stable fit with a constant $\\delta$ which we determine to be 0.23(2). By comparing to the $12^3 \\times 28$ lattice, we estimate the finite volume effect to be about 1.8% for the smallest pion mass. We also study the quenched non-analytic terms in the nucleon and the $\\rho$ masses...

  17. Quenching in coupled adiabatic coils

    Energy Technology Data Exchange (ETDEWEB)

    Williams, J.E.C.

    1985-03-01

    The prediction of the effects of a quench on stress and temperature is an important aspect of the design of superconducting magnets. Of particular interest, and the exclusive topic of this study, is the prediction of the effects of quenching in coupled adiabatic coils, such as the multi-section windings of a high field NMR spectrometer magnet. The predictive methods used here are based on the measurement of the time of propagation of quench between turns. From this measurement an approximate algorithum for the propagation time is used in a code which solves the linear differential equations for the coil currents and calculates the movement of normal zone boundaries and hence the associated winding resistance.

  18. On the O2(a1Δ) quenching by vibrationally excited ozone

    Science.gov (United States)

    Azyazov, V. N.; Mikheyev, P. A.; Heaven, M. C.

    2010-09-01

    The development of a discharge oxygen iodine laser (DOIL) requires efficient production of singlet delta oxygen (O2(a)) in electric discharge. It is important to understand the mechanisms by which O2(a) is quenched in these devices. To gain understanding of this mechanisms quenching of O2(a) in O(3P)/O2/O3/CO2/He/Ar mixtures has been investigated. Oxygen atoms and singlet oxygen molecules were produced by the 248 nm laser photolysis of ozone. The kinetics of O2(a) quenching were followed by observing the 1268 nm fluorescence of the O2 a --> X transition. Fast quenching of O2(a) in the presence of oxygen atoms and molecules was observed. The mechanism of the process has been examined using kinetic models, which indicate that quenching by vibrationally excited ozone is the dominant reaction.

  19. 基于环糊精/卟啉包络物荧光猝灭的二氧化碳光学敏感膜的研究%An Optode Membrane for CO2 Based on Fluorescence Quenching of the Inclusion Complex of Cyclodextrin and Porphyrin

    Institute of Scientific and Technical Information of China (English)

    杨荣华; 王柯敏; 肖丹; 张留德; 羊小海

    2001-01-01

    Heptakis(2,6-di-O-isobutyl)-β-cyclodextrin(DOB-β-CD) is able to increase the fluorescence of meso-tetra (4-methoxylphenyl)porphyrin (TMOPP) immobilized in plasticized PVC membrane,and the fluorescence is quenched by carbon dioxide in aqueous solution.Based on this mechanism,a fluorescence sensing membrane has been developed for the determination of carbon dioxide in aqueous solution.The optimal membrane consists of 2 mg of TMOPP,8 mg of DOB-β-CD,50 mg of PVC and 100 mg of bis(2-ethylhexyl)sebate (DOS).With the optimal condition described,carbon dioxide in solution from 4.75×10-7 to 3.9×10-5 mol/L can be determined.Besides a high reproducibility of the optical signals,the very short response time less than 30 s is realized.The sensor exhibits a good selectivity over some common ions.%全-(2,6-二-O-异丁基)-β-环糊精(DOB-β-CD)对固定于增塑PVc膜中的meso-四(4-甲氧基苯基)卟啉(TMOPP)有明显的荧光增强效应,且该荧光可被溶液中的二氧化碳可逆猝灭.本文据此研制了一种可用于测定水溶液中二氧化碳含量,即[H2CO3]浓度的荧光敏感膜.研究了最佳膜的组成.经过组成优化的敏感膜测定[H2CO3]浓度的范围为4.75×10-7~3.9×10-5mol/L.该传感器响应迅速、重现性好,常见的离子无明显干扰.

  20. Protein trafficking rates assessed by quantum dot quenching with bromocresol green

    OpenAIRE

    Valentine, Cathleen D.; Verkman, A.S.; Haggie, Peter M.

    2011-01-01

    Quantum dots are bright, photostable fluorophores used extensively to investigate biological processes. Here, we report that bromocresol green at low micromolar concentrations rapidly, efficiently and reversibly quenches the fluorescence of commercial quantum dots having a wide range of functionalities. The broad utility of bromocresol green quenching of quantum dots in cell biology is demonstrated in quantitative assays of trafficking of the β2-adrenergic receptor and the cystic fibrosis tra...

  1. Response of Water Stress on Chlorophyll Fluorescence Parameters of Tomato Seedlings%番茄幼苗叶绿素荧光参数对水分胁迫的响应

    Institute of Scientific and Technical Information of China (English)

    须晖; 高洁; 王蕊; 李天来; 马健; 刘满昌

    2011-01-01

    To study the response of tomato seedlings to water stress, the effect on chlorophyll fluorescence properties and chlorophyll content and the relative leaf water content. The results suggested that water stress lead to the maximum quantum efficiency of PSII photochemistry (Fv/Fm), the photochemical quenching (qL)and the linear electron transport rate (ETR) decreased gradually. In contrast, the non photochemical quenching (NPQ) rose gradually. Chlorophyll fluorescence parameters had dash jump phenomena on moderate water stress (the fourth day). Results showed a high correlation (-0.83*) between the decreasing of soil water content (SWC)and NPQ. Hence, NPQ can be an indicator as a guide for irrigation. When NPQ was 2.095, SWC was lower than 32.1%, tomato seedlings were affect on water stress and should be irrigation timely.%以5叶1心期番茄品种‘辽园多丽'为试材,研究番茄幼苗叶绿素荧光特性、叶绿素含量以及叶片相对含水量对水分胁迫的生理响应.结果表明,水分胁迫导致叶绿素荧光参数Fy/Fm、qL、ETR下降,NPQ上升;在轻度水分胁迫下,叶绿素荧光各参数值均有突跃现象.在整个水分胁迫过程中番茄幼苗叶片相对含水量及叶绿素含量均呈下降趋势.NPQ与基质含水量的变化密切相关,相关系数为-0.83',表明荧光参数NPQ可以作为指导灌溉的一个指标.当NPO为2.0975时,基质含水量降到31.2%,番茄幼苗生长受到水分胁迫的影响,应及时灌溉.

  2. How to quench a galaxy

    Science.gov (United States)

    Pontzen, Andrew; Tremmel, Michael; Roth, Nina; Peiris, Hiranya V.; Saintonge, Amélie; Volonteri, Marta; Quinn, Tom; Governato, Fabio

    2017-02-01

    We show how the interplay between active galactic nuclei (AGNs) and merger history determines whether a galaxy quenches star formation (SF) at high redshift. We first simulate, in a full cosmological context, a galaxy of total dynamical mass Mvir = 1012 M⊙ at z = 2. Then we systematically alter the accretion history of the galaxy by minimally changing the linear overdensity in the initial conditions. This `genetic modification' approach allows the generation of three sets of Λ CDM initial conditions leading to maximum merger ratios of 1:10, 1:5 and 2:3, respectively. The changes leave the final halo mass, large-scale structure and local environment unchanged, providing a controlled numerical experiment. Interaction between the AGN physics and mergers in the three cases leads, respectively, to a star-forming, temporarily quenched and permanently quenched galaxy. However, the differences do not primarily lie in the black hole accretion rates, but in the kinetic effects of the merger: the galaxy is resilient against AGN feedback unless its gaseous disc is first disrupted. Typical accretion rates are comparable in the three cases, falling below 0.1 M⊙ yr-1, equivalent to around 2 per cent of the Eddington rate or 10-3 times the pre-quenching star formation rate, in agreement with observations. This low level of black hole accretion can be sustained even when there is insufficient dense cold gas for SF. Conversely, supernova feedback is too distributed to generate outflows in high-mass systems, and cannot maintain quenching over periods longer than the halo gas cooling time.

  3. Chlorophyll Fluorescence Imaging Uncovers Photosynthetic Fingerprint of Citrus Huanglongbing

    Directory of Open Access Journals (Sweden)

    Haiyan Cen

    2017-08-01

    Full Text Available Huanglongbing (HLB is one of the most destructive diseases of citrus, which has posed a serious threat to the global citrus production. This research was aimed to explore the use of chlorophyll fluorescence imaging combined with feature selection to characterize and detect the HLB disease. Chlorophyll fluorescence images of citrus leaf samples were measured by an in-house chlorophyll fluorescence imaging system. The commonly used chlorophyll fluorescence parameters provided the first screening of HLB disease. To further explore the photosynthetic fingerprint of HLB infected leaves, three feature selection methods combined with the supervised classifiers were employed to identify the unique fluorescence signature of HLB and perform the three-class classification (i.e., healthy, HLB infected, and nutrient deficient leaves. Unlike the commonly used fluorescence parameters, this novel data-driven approach by using the combination of the mean fluorescence parameters and image features gave the best classification performance with the accuracy of 97%, and presented a better interpretation for the spatial heterogeneity of photochemical and non-photochemical components in HLB infected citrus leaves. These results imply the potential of the proposed approach for the citrus HLB disease diagnosis, and also provide a valuable insight for the photosynthetic response to the HLB disease.

  4. Chlorophyll Fluorescence Imaging Uncovers Photosynthetic Fingerprint of Citrus Huanglongbing.

    Science.gov (United States)

    Cen, Haiyan; Weng, Haiyong; Yao, Jieni; He, Mubin; Lv, Jingwen; Hua, Shijia; Li, Hongye; He, Yong

    2017-01-01

    Huanglongbing (HLB) is one of the most destructive diseases of citrus, which has posed a serious threat to the global citrus production. This research was aimed to explore the use of chlorophyll fluorescence imaging combined with feature selection to characterize and detect the HLB disease. Chlorophyll fluorescence images of citrus leaf samples were measured by an in-house chlorophyll fluorescence imaging system. The commonly used chlorophyll fluorescence parameters provided the first screening of HLB disease. To further explore the photosynthetic fingerprint of HLB infected leaves, three feature selection methods combined with the supervised classifiers were employed to identify the unique fluorescence signature of HLB and perform the three-class classification (i.e., healthy, HLB infected, and nutrient deficient leaves). Unlike the commonly used fluorescence parameters, this novel data-driven approach by using the combination of the mean fluorescence parameters and image features gave the best classification performance with the accuracy of 97%, and presented a better interpretation for the spatial heterogeneity of photochemical and non-photochemical components in HLB infected citrus leaves. These results imply the potential of the proposed approach for the citrus HLB disease diagnosis, and also provide a valuable insight for the photosynthetic response to the HLB disease.

  5. Quench Simulation Studies: Program documentation of SPQR

    CERN Document Server

    Sonnemann, F

    2001-01-01

    Quench experiments are being performed on prototypes of the superconducting magnets and busbars to determine the adequate design and protection. Many tests can only be understood correctly with the help of quench simulations that model the thermo-hydraulic and electrodynamic processes during a quench. In some cases simulations are the only method to scale the experimental results of prototype measurements to match the situation of quenching superconducting elements in the LHC. This note introduces the theoretical quench model and the use of the simulation program SPQR (Simulation Program for Quench Research), which has been developed to compute the quench process in superconducting magnets and busbars. The model approximates the heat balance equation with the finite difference method including the temperature dependence of the material parameters. SPQR allows the simulation of longitudinal quench propagation along a superconducting cable, the transverse propagation between adjacent conductors, heat transfer i...

  6. Photoprotection in higher plants: the putative quenching site is conserved in all outer light-harvesting complexes of Photosystem II.

    Science.gov (United States)

    Mozzo, Milena; Passarini, Francesca; Bassi, Roberto; van Amerongen, Herbert; Croce, Roberta

    2008-10-01

    In bright sunlight, the amount of energy harvested by plants exceeds the electron transport capacity of Photosystem II in the chloroplasts. The excess energy can lead to severe damage of the photosynthetic apparatus and to avoid this, part of the energy is thermally dissipated via a mechanism called non-photochemical quenching (NPQ). It has been found that LHCII, the major antenna complex of Photosystem II, is involved in this mechanism and it was proposed that its quenching site is formed by the cluster of strongly interacting pigments: chlorophylls 611 and 612 and lutein 620 [A.V. Ruban, R. Berera, C. Ilioaia, I.H.M. van Stokkum, J.T.M. Kennis, A.A. Pascal, H. van Amerongen, B. Robert, P. Horton and R. van Grondelle, Identification of a mechanism of photoprotective energy dissipation in higher plants, Nature 450 (2007) 575-578.]. In the present work we have investigated the interactions between the pigments in this cluster not only for LHCII, but also for the homologous minor antenna complexes CP24, CP26 and CP29. Use was made of wild-type and mutated reconstituted complexes that were analyzed with (low-temperature) absorption and circular-dichroism spectroscopy as well as by biochemical methods. The pigments show strong interactions that lead to highly specific spectroscopic properties that appear to be identical for LHCII, CP26 and CP29. The interactions are similar but not identical for CP24. It is concluded that if the 611/612/620 domain is responsible for the quenching in LHCII, then all these antenna complexes are prepared to act as a quencher. This can explain the finding that none of the Lhcb complexes seems to be strictly required for NPQ while, in the absence of all of them, NPQ is abolished.

  7. 一种基于钝顶螺旋藻藻蓝蛋白荧光猝灭法的汞离子传感新方法%A New Method for Determination of Mercury Ions Based on the Fluorescence Quenching of Phycocyanin from Spirulina Platensis

    Institute of Scientific and Technical Information of China (English)

    张何; 胡家义; 傅昕

    2012-01-01

    采用反复冻融细胞破裂法、硫酸铵分级盐析以及羟基磷灰石柱层析,从钝顶螺旋藻中提取出高纯度的藻蓝蛋白样品,纯度(A62a/A280)达4.1.该蛋白的紫外-可见吸收光谱表明其特征吸收峰为280、360、620nm,荧光光谱表明其最大发射波长为650 nm.以该藻蓝蛋白为荧光探针,发展了一种基于荧光猝灭法的Hg2检测新方法.并考察了缓冲体系、缓冲液pH值、反应时间、温度以及藻蓝蛋白的浓度等因素对汞离子检测的影响,在0.05 mol/L、pH7.5的磷酸二氢钾-磷酸氢二钠缓冲液中,当藻蓝蛋白浓度为3 mg/L、反应时间为30 min、反应温度为30℃时,该方法的线性范围为0.1~10μmol/L,检出限为0.056 μmol/L.该方法表现出良好的汞离子传感选择性,而且当干扰离子与汞离子的浓度比为40∶1时,多种共存离子对汞离子的检测影响较小.该方法荧光探针提取容易,价格低且环境友好,具有较高的灵敏度和较好的重现性.%Through repeated freezing and thawing of cell, ammonium sulfate precipitation and hydroxyapatite chromatography, the phycocyanin was extracted from spirulina platensis and its purity could reach up to A620/A280 = 4. 1. UV - visible spectra and fluorescence emission spectrometry were used to study the spectral characterisitic of the protein. The results showed that the absorption peaks of the purified protein were located at 280, 360, 620 nm and the maximum emission wavelength was 650 nm. Using this phycocyanin as fluorescence probe, a new approach was developed for the sensitive and selective determination of divalent mercury ions based on fluorescence quenching. Different influence factors, including pH value, reaction time, temperature and phycocyanin concentration, were investigated. In 0. 05 mol/L KH2PO4 - Na2HPO4 , at a pH value of 7. 5, phycocyanin concentration of 3 mg/L, reaction time of 30 min and reaction temperature of 30 ℃, the relative fluorescence intensity

  8. Quenched Reinforcement Exposed to Fire

    DEFF Research Database (Denmark)

    Hertz, Kristian Dahl

    2006-01-01

    Idealized data are derived for the tensile strength of quenched and tempered prestressing steel and of quenched and self-tempered reinforcing bars for fire safety design. 0.2% stresses are derived as a function of the maximum temperature and in addition, 2.0% stresses are provided. A strain of 2.......0% is seldom found in “slack” (not prestressed) reinforcement, but 2.0% stresses might be relevant for reinforcement in T shaped cross sections and for prestressed structures, where large strains can be applied. All data are provided in a “HOT” condition during a fire and in a “COLD” condition after a fire....... The COLD condition is relevant for analyses of residual load bearing capacity of a structure after a fire exposure. It is also relevant for analyses of concrete structures exposed to fully developed fire courses. The reason is that compression zones of concrete are always the weakest in the cooling phase...

  9. Holographic quenches and anomalous transport

    CERN Document Server

    Ammon, Martin; Jimenez-Alba, Amadeo; Macedo, Rodrigo P; Melgar, Luis

    2016-01-01

    We study the response of the chiral magnetic effect due to continuous quenches induced by time dependent electric fields within holography. Concretely, we consider a holographic model with dual chiral anomaly and compute the electric current parallel to a constant, homogeneous magnetic field and a time dependent electric field in the probe approximation. We explicitly solve the PDEs by means of pseudospectral methods in spatial and time directions and study the transition to an universal "fast" quench response. Moreover, we compute the amplitudes, i.e.,~residues of the quasi normal modes, by solving the (ODE) Laplace transformed equations. We investigate the possibility of considering the asymptotic growth rate of the amplitudes as a well defined notion of initial time scale for linearized systems. Finally, we highlight the existence of Landau level resonances in the electrical conductivity parallel to a magnetic field at finite frequency and show explicitly that these only appear in presence of the anomaly. ...

  10. Quench cooling under reduced gravity

    CERN Document Server

    Chatain, D; Nikolayev, V S; Beysens, D

    2013-01-01

    We report the quench cooling experiments performed with liquid O2 under different levels of gravity simulated with the magnetic gravity compensation. A copper disk is quenched from 270K to 90K. It is found that the cooling time in microgravity is very long in comparison with any other gravity level. This phenomenon is explained by the isolation effect of the gas surrounding the disk. The liquid subcooling is shown to drastically improuve the heat exchange thus reducing the cooling time (about 20 times). The effect of subcooling on the heat transfer is analyzed at different gravity levels. It is shown that such type of experiments cannot be used for the analysis of the critical heat flux (CHF) of the boiling crisis. The minimum heat flux (MHF) of boiling is analyzed instead.

  11. Quenched Reinforcement Exposed to Fire

    DEFF Research Database (Denmark)

    Hertz, Kristian Dahl

    2006-01-01

    Idealized data are derived for the tensile strength of quenched and tempered prestressing steel and of quenched and self-tempered reinforcing bars for fire safety design. 0.2% stresses are derived as a function of the maximum temperature and in addition, 2.0% stresses are provided. A strain of 2.......0% is seldom found in “slack” (not prestressed) reinforcement, but 2.0% stresses might be relevant for reinforcement in T shaped cross sections and for prestressed structures, where large strains can be applied. All data are provided in a “HOT” condition during a fire and in a “COLD” condition after a fire....... The COLD condition is relevant for analyses of residual load bearing capacity of a structure after a fire exposure. It is also relevant for analyses of concrete structures exposed to fully developed fire courses. The reason is that compression zones of concrete are always the weakest in the cooling phase...

  12. TASK 2: QUENCH ZONE SIMULATION

    Energy Technology Data Exchange (ETDEWEB)

    Fusselman, Steve

    2015-09-30

    Aerojet Rocketdyne (AR) has developed an innovative gasifier concept incorporating advanced technologies in ultra-dense phase dry feed system, rapid mix injector, and advanced component cooling to significantly improve gasifier performance, life, and cost compared to commercially available state-of-the-art systems. A key feature of the AR gasifier design is the transition from the gasifier outlet into the quench zone, where the raw syngas is cooled to ~ 400°C by injection and vaporization of atomized water. Earlier pilot plant testing revealed a propensity for the original gasifier outlet design to accumulate slag in the outlet, leading to erratic syngas flow from the outlet. Subsequent design modifications successfully resolved this issue in the pilot plant gasifier. In order to gain greater insight into the physical phenomena occurring within this zone, AR developed a cold flow simulation apparatus with Coanda Research & Development with a high degree of similitude to hot fire conditions with the pilot scale gasifier design, and capable of accommodating a scaled-down quench zone for a demonstration-scale gasifier. The objective of this task was to validate similitude of the cold flow simulation model by comparison of pilot-scale outlet design performance, and to assess demonstration scale gasifier design feasibility from testing of a scaled-down outlet design. Test results did exhibit a strong correspondence with the two pilot scale outlet designs, indicating credible similitude for the cold flow simulation device. Testing of the scaled-down outlet revealed important considerations in the design and operation of the demonstration scale gasifier, in particular pertaining to the relative momentum between the downcoming raw syngas and the sprayed quench water and associated impacts on flow patterns within the quench zone. This report describes key findings from the test program, including assessment of pilot plant configuration simulations relative to actual

  13. Jet-quenching and correlations

    Indian Academy of Sciences (India)

    Fuqiang Wang

    2015-05-01

    This article reviews recent advances in our understanding of the experimental aspects of jet-quenching and correlations in relativistic heavy-ion collisions at RHIC and LHC. Emphasis is put on correlation measurements, namely jet-like correlations with anisotropic flow subtraction in heavy-ion collisions and long-range pseudorapidity correlations in small systems. Future path on correlation studies is envisioned which may elucidate jet–medium interactions and the properties of the hot dense medium in QCD.

  14. The LHC quench protection system

    CERN Multimedia

    2009-01-01

    The new quench protection system (QPS) has the crucial roles of providing an early warning for any part of the superconducting coils and busbars that develop high resistance, as well as triggering the switch-off of the machine. Over 2000 new detectors will be installed around the LHC to make sure every busbar segment between magnets is monitored and protected. One of the major consolidation activities for the LHC is the addition of two new detectors to the quench protection system. A magnet quench occurs when part of the superconducting cable becomes normally-conducting. When the protection system detects an increased resistance the huge amount of energy stored in the magnet chains is safely extracted and ‘dumped’ into specially designed resistors. In the case of the main dipole chain, the stored energy in a single LHC sector is roughly the same as the kinetic energy of a passenger jet at cruising speed. The first new detector is designed to monitor the superconducting...

  15. How to quench a galaxy

    CERN Document Server

    Pontzen, Andrew; Roth, Nina; Peiris, Hiranya V; Saintonge, Amélie; Volonteri, Marta; Quinn, Tom; Governato, Fabio

    2016-01-01

    We show how the interplay between active galactic nuclei (AGN) and merger history determines whether a galaxy quenches star formation at high redshift. We first simulate, in a full cosmological context, a galaxy of total dynamical mass $10^{12}\\,M_{\\odot}$ at $z=2$. Then we systematically alter the accretion history of the galaxy by minimally changing the linear overdensity in the initial conditions. This "genetic modification" approach allows the generation of three sets of $\\Lambda$CDM initial conditions leading to maximum merger ratios of 1:10, 1:5 and 2:3 respectively. The changes leave the final halo mass, large scale structure and local environment unchanged, providing a controlled numerical experiment. Interaction between the AGN physics and mergers in the three cases lead respectively to a star-forming, temporarily-quenched and permanently-quenched galaxy. However the differences do not primarily lie in the black hole accretion rates, but in the kinetic effects of the merger: the galaxy is resilient a...

  16. STUDY ON THE SOLUTION FLUORESCENCE QUENCHING FOR POLYSILANES

    Institute of Scientific and Technical Information of China (English)

    1998-01-01

    STUDYONTHESOLUTIONFLUORESCENCEQUENCHINGFORPOLYSILANESHuHuipingHuangKelongPanChunyue(DepartmentofChemistry,CentralSouthUnivers...

  17. 家榆和金叶榆光合·蒸腾及荧光参数对水分胁迫的响应%Research on the Response of the Photosynthesis,Transpiration and Fluorescence Index of Ulmus pumila L.and Ulmus pumila cv.jinye to Water Stress

    Institute of Scientific and Technical Information of China (English)

    曹书敏; 杨晴; 杨俊明; 李搬顺; 黄印冉; 张均营

    2011-01-01

    [Objective] The difference in the drought tolerance between Ulmus pumiln L. And Ulmus pumila cv.jinye was analyzed. [ Method] The potted experiment in the drought tolerance of the seedlings of 2 year-old Ulmus pumila L. And Ulmus pumila cv.jinye that were planted in soil with 4 gradient levels of moisture and the photosynthesis,transpiration and fluorescence parameter of the seedlings were measured with GFS -3000 portable photosynthesis measurement system. [ Results ] With the intensification of water stress, the photosvnthetic rate, transpiration rate, water -using efficiency, stomatal conductance of Ulmus pumila L. And Ulmus pumila cv.jinye showed a downward trend and the higher the degree of water stress was,the smaller the declining degree of Ulmus pumila cv.jinye photosynthetic rate was than that of Ulmus pumila L. Under the condition of severe water stress,the transpiration rate and non-photochemical quenching of Ulmus pumila cv.jinye was significantly lower than these of Ulmus pumila L. And the stomatal conductance,chlorophyll fluorescence parameter and non-photochemical quenching of Ulmus pumila cv.jinye were significantly higher these of Ulmus pumila L. [Conclusion] In dry conditions, the ability of Ulmus pumila cv.jinye in drought resistance, self-regulation and adaptable to environment was stronger than these of Ulmus pumila L. And Ulmus pumila cv.jinye was with even greater potential in severe drought environment.%[目的]探讨家榆和金叶榆抗旱能力的差异.[方法]设置4个土壤水分梯度,用2年生家榆和金叶榆幼苗进行盆栽控水试验,利用GFS-3000便携式光合作用荧光测量系统测定试验苗的光合、蒸腾和荧光参数.[结果]随水分胁迫程度的加剧,家榆和金叶榆光合速率、蒸腾速率、水分利用效率、气孔导度均呈下降趋势;水分胁迫程度越高,金叶榆光合速率比家榆下降的幅度越小;在重度水分胁迫条件下,金叶榆的蒸腾速率、非光化学猝灭

  18. Proton-transfer mediated quenching of pyrene/indole charge-transfer states in isooctane solutions.

    Science.gov (United States)

    Altamirano, Marcela S; Bohorquez, María del Valle; Previtali, Carlos M; Chesta, Carlos A

    2008-01-31

    The fluorescence quenching of pyrene (Py) by a series of N-methyl and N-H substituted indoles was studied in isooctane at 298 K. The fluorescence quenching rate constants were evaluated by mean of steady-state and time-resolved measurements. In all cases, the quenching process involves a charge-transfer (CT) mechanism. The I(o)/I and tau(o)/tau Stern-Volmer plots obtained for the N-H indoles show a very unusual upward deviation with increasing concentration of the quenchers. This behavior is attributed to the self-quenching of the CT intermediates by the free indoles in solution. The efficiency of quenching of the polyaromatic by the N-H indoles increases abruptly in the presence of small amount of added pyridine (or propanol). A detailed analysis of the experimental data obtained in the presence of pyridine provides unambiguous evidence that the self-quenching process involves proton transfer from the CT states to indoles.

  19. Quantum quench and scaling of entanglement entropy

    Science.gov (United States)

    Caputa, Paweł; Das, Sumit R.; Nozaki, Masahiro; Tomiya, Akio

    2017-09-01

    Global quantum quench with a finite quench rate which crosses critical points is known to lead to universal scaling of correlation functions as functions of the quench rate. In this work, we explore scaling properties of the entanglement entropy of a subsystem in a harmonic chain during a mass quench which asymptotes to finite constant values at early and late times and for which the dynamics is exactly solvable. When the initial state is the ground state, we find that for large enough subsystem sizes the entanglement entropy becomes independent of size. This is consistent with Kibble-Zurek scaling for slow quenches, and with recently discussed ;fast quench scaling; for quenches fast compared to physical scales, but slow compared to UV cutoff scales.

  20. Quenching star formation in cluster galaxies

    CERN Document Server

    Taranu, Dan S; Balogh, Michael L; Smith, Russell J; Power, Chris; Krane, Brad

    2012-01-01

    In order to understand the processes that quench star formation within rich clusters, we construct a library of subhalo orbits drawn from lambdaCDM cosmological N-body simulations of four rich clusters. The orbits are combined with models of star formation followed by quenching in the cluster environment to predict colours and spectroscopic line indices of satellite galaxies. Simple models with only halo mass-dependent quenching and without environmental (i.e. cluster-dependent) quenching fail to reproduce the observed cluster-centric colour and absorption linestrength gradients. Models in which star formation is instantly quenched at the virial radius also fail to match the observations. Better matches to the data are achieved by more complicated bulge-disc models in which the bulge stellar populations depend only on the galaxy subhalo mass while the disc quenching depends on the cluster environment. In the most successful models quenching begins at pericentre, operating on an exponential timescale of 2 -- 3...

  1. 3个钓钟柳品种叶绿素荧光特性比较%Chlorophyll fluorescence parameters in three cultivars of Penstemon

    Institute of Scientific and Technical Information of China (English)

    陶文文; 蒋文伟; 赵丽娟

    2011-01-01

    The chlorophyll fluorescence parameters change of the Penstemon was studied, the aim was to enhance its planting management for the region in east China. Chlorophyll fluorescence parameters [minimal fluo rescence(Fo), maximum fluorescence (Fm), photochemical quenching (qp), variable fluorescence (Fv), yield (Y), non photochemical quenching (NPQ), and electron transport rate (ETR) ] of Penstemon campanulatus ‘Purple Passion' , Penstemon digitalis ‘Husker Red' , and Penstemon barbatus ‘Rondo' , all perennial root flowers, were measured and compared by the chlorophyll florescence measuring technique. A correlation analysis was conducted. Results of the correlation analysis showed significant positive correlations between Fo and Fm, qp and Fm, qp and Fv, Y and ETa, Fm and Fv, Fo and F, and Fm and Y; significantly negative correlations were found between Fo and ETR and Fv/Fo and Y. Also, chlorophyll fluorescence parameters for the three cultivars were significant(P < 0.05) and highly significant (P < 0.01 ). The values of Fv, Fv/Fm, Fv/Fo, Y,ETR, qp, and Nm for the three cultivars were in the order: ‘Purple Passion' > ‘Rondo' > ‘Husker Red'. Thus, the photosynthetic physiological functions of P. campanulatus ‘Purple Passion' were best.%利用叶绿素荧光测定技术测定了多年生宿根花卉紫红钓钟柳penstemon campanulatus'Purple Passion',毛地黄钓钟柳P.digitalis'Husker Red'和五彩钓钟柳P.barbatus'Rondo'等3个钓钟柳品种的叶绿素荧光参数,并对它们进行比较.结果表明:3个钓钟柳品种间的叶绿素荧光参数均达到显著或极显著水平,紫红钓钟柳的可变荧光(Fv),光系统Ⅱ原始光能转化效率(Fv/Fm),光系统Ⅱ的潜在活性(Fv/Fo),光合量子产额(Y),表观光合电子传递速率(ETR),光化学猝灭系数(qp),非炮化学猝灭系数(NPQ)值最高,其次为五彩钓钟柳,最低是毛地黄钓钟柳.说明紫红钓钟柳具有较好的光合生理功能,其次是五彩钓钟

  2. 基于T-Hg2+-T及G四聚体自身熄灭能力的"Turn on"型单标记DNA荧光探针用于碘离子的检测%Single-labeled "Turn on" Fluorescent Oligonucleotide Probe for Iodide Detection Based on T-Hg2+-T and Inherent Quenching Ability of G-quadruplex

    Institute of Scientific and Technical Information of China (English)

    朱颖; 刘沛; 羊小海; 何磊良; 李清照; 王青; 王柯敏; 黄晋; 刘剑波

    2012-01-01

    A simple and "Turn on" type iodide anion assay method was developed, based on the inherent quenching ability of G-quadruplex and fidelity of the " thymine-Hg2+ -thymine" binding motif. A T-rich sequence was labeled with 6-carboxyfluorescein(FAM) at its 5'-end, nearby the 3'-end was a G-rich sequence which could form G-quadruplex structure instead of traditional quenchers. Upon addition of Hg2+, T-rich sequence folded into a hairpin structure which led the G-quadruplex near to the FAM, and the FAM was quenched by the G-quadruplex owning to photoinduced electron transfer between the dye and the G-quadruplex. After the addition of iodide, the fluorescence of FAM recovered considering that iodide could bind with Hg2+. The novel method for the determination of iodide was developed in linear range of 50—500 nmol/L, with the detection limit(3σ) of 30 nmol/L. This proposed method was highly selective and other anions have no interfering effects on the determination, which was successfully applied for analysis of real samples with the recovery from 92%-109% , and the RSD<4% (n=4).%利用G四聚体可以熄灭荧光的特性以及T-Hg2+-T的特殊结构,发展了一种简便的"Turn on”型碘离子检测新方法.设计了一条5'端标有荧光基团的富T序列,3'端采用能形成G四聚体的富G序列代替传统的熄灭基团.加入汞离子后,富T序列形成T-Hg2+-T机构发生折叠,G四聚体靠近荧光基团,发生光诱导电子转移,使荧光被熄灭.若加入碘离子,碘离子会与汞离子形成较稳定的配合物,汞离子从DNA上被竞争下来,探针的荧光得以恢复,且荧光强度与50 ~ 500 nmol/L的碘离子呈良好线性关系,检出限为30 nmol/L.本方法选择性好,10倍于碘离子浓度的其它常见阴离子干扰较小.检测自来水样中碘离子的回收率为92%~ 109%,相对标准偏差RSD<4%(n=4).

  3. Concentration Quenching in Erbium Doped Bismuth Silicate Glasses

    Institute of Scientific and Technical Information of China (English)

    DAI Shi-Xun; XU Tie-Feng; NIE Qiu-Hua; SHEN Xiang; WANG Xun-Si

    2006-01-01

    @@ Er2 O3-doped bismuth silicate glasses are prepared by the conventional melt-quenching method, and the Er3+ : 4 I13/2 → 4I15/2 fluorescence properties are studied for different Er3+ concentrations. Infrared spectra are measured to estimate the exact content of OH- groups in the samples. Based on the electric dipole-dipole interaction theory,the interaction parameter CEr,Er for the migration rate of Er3+ :4 I13/2 → 4 I13/2 in proposed glasses is calculated.

  4. Some fluorescence properties of dimethylaminochalcone and its novel cyclic analogues

    Science.gov (United States)

    Tomečková, Vladimíra; Poškrobová, Martina; Štefanišinová, Miroslava; Perjési, Pál

    2009-12-01

    This paper demonstrates the basic character (polarity, solubility, colour, absorption and fluorescence quantum yield) of synthetic dimethylaminochalcone ( 1) and its cyclic analogues measured in toluene, chloroform, dimethylsulfoxide and ethanol, which have been studied by absorption and fluorescence spectroscopy. The biologically active dye 4'-dimethylaminochalcone ( 1b) and its less flexible analogues 4-dimethylaminoindanone ( 2b), -tetralone ( 3b), and -benzosuberone ( 4b) are lipophilic molecules that displayed the best solubility in toluene and chloroform. The highest fluorescence and quantum yields of compounds 1 and 2 have been obtained in DMSO and chloroform. Quenching effect of fluorescence compounds ( 1- 4) has been studied in the mixture of the most polar organic solvents DMSO and water. In the presence of water, fluorescence of compound 1 has been quenched the best from all studied chalcones and emission maxima of molecules 1- 4 have been shifted to the longer wavelengths. Quenching effect of fluorescence by water was in order 1 > 2 > 3 > 4.

  5. γ-氨基丁酸(GABA)对低氧胁迫下甜瓜幼苗光合作用和叶绿素荧光参数的影响%Effects of γ-aminobutyric acid on the photosynthesis and chlorophyll fluorescence parameters of muskmelon seedlings under hypoxia stress

    Institute of Scientific and Technical Information of China (English)

    夏庆平; 高洪波; 李敬蕊

    2011-01-01

    By the method of hydroponic culture, this paper studied the effects of exogenous γ-aminobutyric acid ( GABA) on the photosynthetic pigment contents, photosynthesis. and chlorophyll fluorescence parameters of muskmelon seedlings under hypoxia stress. Hypoxia stress induced a significant decrease of photosynthetic pigment contents, resulting in the decrease of photosynthesis.Applying GABA could significantly increase the photosynthetic pigment contents, net photosynthetic rate (Pn) , stomatal conductance ( Gs ) , intercellular CO2 concentration ( Ci) , carboxylation efficiency ( CE ) . maximal photochemical efficiency of Ps Ⅱ ( Fv/Fm ) , photochemical quenching (qP) , apparent photosynthetic electron transfer rate ( ETR) , and quantum yield of PS Ⅱ electron transport ( ΦPSⅡ ) , and decrease the stomatal limitation value (Ls ) , minimal fluorescence ( F0) ,and non-photochemical quenching ( NPQ) under both hypoxic and normal conditions. The alleviation effect of GABA on photosynthetic characteristics was more obvious under hypoxia stress. However. simultaneously applying GABA and VGB could significantly decrease the alleviation effect of GABA under hypoxia stress.%采用营养液水培方法,研究了低氧胁迫下外源γ-氨基丁酸(GABA)对甜瓜幼苗光合色素含量、光合作用及叶绿素荧光参数的影响.结果表明:低氧胁迫导致甜瓜幼苗光合色素含量显著下降,光合作用降低;外源GABA能显著提高正常通气和低氧胁迫下甜瓜幼苗的光合色素含量、净光合速率、气孔导度、胞间CO2浓度、CO2羧化效率、最大光化学效率、光化学猝灭系数、表观光合电子传递速率和PSⅡ光合电子传递量子效率,而气孔限制值、初始荧光和非光化学猝灭系数显著降低,GABA在低氧胁迫下的提高效果更明显;同时添加GABA和GABA转氨酶抑制剂γ-乙烯基-γ-氨基丁酸(VGB)处理显著降低了低氧胁迫下GABA对甜瓜幼苗光合特性的缓解效果.

  6. Jet quenching via jet collimation

    CERN Document Server

    Casalderrey-Solana, J; Wiedemann, U

    2011-01-01

    The strong modifications of dijet properties in heavy ion collisions measured by ATLAS and CMS provide important constraints on the dynamical mechanisms underlying jet quenching. In this work, we show that the transport of soft gluons away from the jet cone - jet collimation - can account for the observed dijet asymmetry with values of $\\hat{q}\\, L$ that lie in the expected order of magnitude. Further, we show that the energy loss attained through this mechanism results in a very mild distortion of the azimuthal angle dijet distribution.

  7. Jet Quenching via Jet Collimation

    CERN Document Server

    Casalderrey-Solana, Jorge; Wiedemann, Urs Achim

    2011-01-01

    The ATLAS Collaboration recently reported strong modifications of dijet properties in heavy ion collisions. In this work, we discuss to what extent these first data constrain already the microscopic mechanism underlying jet quenching. Simple kinematic arguments lead us to identify a frequency collimation mechanism via which the medium efficiently trims away the soft components of the jet parton shower. Through this mechanism, the observed dijet asymmetry can be accomodated with values of $\\hat{q}\\, L$ that lie in the expected order of magnitude.

  8. Temperature-dependent responses of the photosynthetic and chlorophyll fluorescence attributes of apple (Malus domestica) leaves during a sustained high temperature event.

    Science.gov (United States)

    Greer, Dennis H

    2015-12-01

    The objective of this study was to follow changes in the temperature-dependent responses of photosynthesis and photosystem II performance in leaves of field-grown trees of Malus domestica (Borkh.) cv. 'Red Gala' before and after exposure to a long-term heat event occurring late in the growing season. Light-saturated photosynthesis was optimal at 25 °C before the heat event. The high temperatures caused a reduction in rates at low temperatures (15-20 °C) but increased rates at high temperatures (30-40 °C) and a shift in optimum to 30 °C. Rates at all temperatures increased after the heat event and the optimum shifted to 33 °C, indicative of some acclimation to the high temperatures occurring. Photosystem II attributes were all highly temperature-dependent. The operating quantum efficiency of PSII during the heat event declined, but mostly at high temperatures, partly because of decreased photochemical quenching but also from increased non-photochemical quenching. However, a further reduction in PSII operating efficiency occurred after the heat event subsided. Non-photochemical quenching had subsided, whereas photochemical quenching had increased in the post-heat event period and consistent with a greater fraction of open PSII reaction centres. What remained uncertain was why these effects on PSII performance appeared to have no effect on the process of light-saturated photosynthesis. However, the results provide an enhanced understanding of the impacts of sustained high temperatures on the photosynthetic process and its underlying reactions, notably photochemistry. Copyright © 2015 Elsevier Masson SAS. All rights reserved.

  9. Holographic quenches and anomalous transport

    Science.gov (United States)

    Ammon, Martin; Grieninger, Sebastian; Jimenez-Alba, Amadeo; Macedo, Rodrigo P.; Melgar, Luis

    2016-09-01

    We study the response of the chiral magnetic effect due to continuous quenches induced by time dependent electric fields within holography. Concretely, we consider a holographic model with dual chiral anomaly and compute the electric current parallel to a constant, homogeneous magnetic field and a time dependent electric field in the probe approximation. We explicitly solve the PDEs by means of pseudospectral methods in spatial and time directions and study the transition to an universal "fast" quench response. Moreover, we compute the amplitudes, i.e., residues of the quasi normal modes, by solving the (ODE) Laplace transformed equations. We investigate the possibility of considering the asymptotic growth rate of the amplitudes as a well defined notion of initial time scale for linearized systems. Finally, we highlight the existence of Landau level resonances in the electrical conductivity parallel to a magnetic field at finite frequency and show explicitly that these only appear in presence of the anomaly. We show that the existence of these resonances induces, among others, a long-lived AC electric current once the electric field is switched off.

  10. Gold nanoparticle-fluorophore complex for conditionally fluorescing signal mediator

    Energy Technology Data Exchange (ETDEWEB)

    Wang Jianting [Department of Chemical Engineering University of, Louisville, KY 40292 (United States); Achilefu, Samuel [Department of Radiology, Washington University School of Medicine, St. Louis, MO 63110 (United States); Nantz, Michael [Department of Chemistry, University of Louisville, Louisville, KY 40292 (United States); Kang, Kyung A., E-mail: kyung.kang@louisville.edu [Department of Chemical Engineering University of, Louisville, KY 40292 (United States)

    2011-06-10

    Fluorescent contrast agents with high specificity and sensitivity are valuable for accurate disease detection and diagnosis. Spherical gold nanoparticles (GNPs) can be smartly utilized for developing highly effective agents. The strong electromagnetic (plasmon) field on their surface can be very effective in influencing the electrons of fluorophores and, thus, manipulating the fluorescence output (i.e., either quenching or enhancement). Fluorescence quenching can be used for negative sensing, or for conditional de-quenching to increase the specificity. Fluorescence enhancement allows sensing to be more sensitive. The level of fluorescence alteration depends on the GNP size, the excitation and emission wavelengths and quantum yield of the fluorophore, and the distance between the GNP and the fluorophore. To understand the mechanisms of the fluorescence change by GNP, we have theoretically analyzed the parameters involved in the fluorescence alteration for commonly used fluorophores, with an emphasis on quenching. The results showed that the fluorescence of fluorophores with the excitation (Ex) and emission (Ex) wavelengths close to the GNP resonance peak tended to be significantly quenched by GNPs. For those fluorophores emitting fluorescence in red or near infrared, to achieve quenching, the distance between GNP and the fluorophore was required to be very short. In general, a shorter distance resulted in more quenching. Bigger GNPs require a shorter distance to achieve the same level of quenching. The fluorescence of a fluorophore with a lower quantum yield (especially the one with emission in far-red or near-infrared) is more difficult to be quenched by GNPs (requires very short distance). Instead, it can be enhanced. Based on the theoretical study, we have developed a near-infrared contrast agent, i.e., Cypate conjugated GNP via a short peptide spacer. Normally the fluorescence of Cypate was quenched. The spacer has a motif of a substrate for urokinase type

  11. Fluorescence chemosensors with pyrene and their interaction with nucleotide phosphate

    Institute of Scientific and Technical Information of China (English)

    李华平; 汪鹏飞; 吴世康

    1999-01-01

    A group of fluorescence chemosensor with pyrene, compounds (Ⅰ), (Ⅱ) and (Ⅲ), were synthesized The fluorescence spectra and the lifetime of these compounds were carefully measured. The fluorescence quenching spec tra of pyrenyl butyric acid, compounds (Ⅰ), (Ⅱ) and (Ⅲ) by different nucleotide phosphates, AMP ADP, ATP dTTP, were also recorded and studied. The quenching and the stability constants were calculated by Stern-Volmer equa tion and eq. (2), respectively. The mechanism of interaction between fluorescence chemosensor and nucleotide phos phate was didscussed based on the comparison of the results obtained with the CPK model of free molecules of these com pounds in the ground state.

  12. Neural Variability Quenching Predicts Individual Perceptual Abilities.

    Science.gov (United States)

    Arazi, Ayelet; Censor, Nitzan; Dinstein, Ilan

    2017-01-04

    Neural activity during repeated presentations of a sensory stimulus exhibits considerable trial-by-trial variability. Previous studies have reported that trial-by-trial neural variability is reduced (quenched) by the presentation of a stimulus. However, the functional significance and behavioral relevance of variability quenching and the potential physiological mechanisms that may drive it have been studied only rarely. Here, we recorded neural activity with EEG as subjects performed a two-interval forced-choice contrast discrimination task. Trial-by-trial neural variability was quenched by ∼40% after the presentation of the stimulus relative to the variability apparent before stimulus presentation, yet there were large differences in the magnitude of variability quenching across subjects. Individual magnitudes of quenching predicted individual discrimination capabilities such that subjects who exhibited larger quenching had smaller contrast discrimination thresholds and steeper psychometric function slopes. Furthermore, the magnitude of variability quenching was strongly correlated with a reduction in broadband EEG power after stimulus presentation. Our results suggest that neural variability quenching is achieved by reducing the amplitude of broadband neural oscillations after sensory input, which yields relatively more reproducible cortical activity across trials and enables superior perceptual abilities in individuals who quench more.

  13. Quenching nitrogen-vacancy center photoluminescence with infrared pulsed laser

    CERN Document Server

    Lai, N D; Zheng, D; Jacques, V; Chang, H -C; Roch, J -F; Treussart, F

    2013-01-01

    Diamond nanocrystals containing Nitrogen-Vacancy (NV) color centers have been used in recent years as fluorescent probes for near-field and cellular imaging. In this work we report that an infrared (IR) pulsed excitation beam can quench the photoluminescence of NV color center in a diamond nanocrystal (size < 50 nm) with an extinction ratio as high as ~90%. We attribute this effect to the heating of the nanocrystal consecutive to multi-photon absorption by the diamond matrix. This quenching is reversible: the photoluminescence intensity goes back to its original value when the IR laser beam is turned off, with a typical response time of hundred picoseconds, allowing for a fast control of NV color center photoluminescence. We used this effect to achieve sub-diffraction limited imaging of fluorescent diamond nanocrystals on a coverglass. For that, as in Ground State Depletion super-resolution technique, we combined the green excitation laser beam with the control IR depleting one after shaping its intensity ...

  14. Quenched QCD near the chiral limit

    CERN Document Server

    Göckeler, M; Petters, D; Pleiter, D; Rakow, P E L; Schierholz, G

    2000-01-01

    A numerical study of quenched QCD for light quarks is presented using O(a)improved fermions. Particular attention is paid to the possible existence anddetermination of quenched chiral logarithms. A `safe' region to use for chiralextrapolations appears to be at and above the strange quark mass.

  15. Monte Carlo Tools for Jet Quenching

    OpenAIRE

    Zapp, Korinna

    2011-01-01

    A thorough understanding of jet quenching on the basis of multi-particle final states and jet observables requires new theoretical tools. This talk summarises the status and propects of the theoretical description of jet quenching in terms of Monte Carlo generators.

  16. Quenched chiral perturbation theory to one loop

    NARCIS (Netherlands)

    Colangelo, Gilberto; Pallante, Elisabetta

    1998-01-01

    We calculate the divergences of the generating functional of quenched chiral perturbation theory at one loop, and renormalize the theory by an appropriate definition of the counterterms. We show that the quenched chiral logarithms can be accounted for by defining a renormalized B0 parameter which, a

  17. Quenched Chiral Perturbation Theory to one loop

    NARCIS (Netherlands)

    Colangelo, G.; Pallante, E.

    1998-01-01

    The divergences of the generating functional of quenched Chiral Perturbation theory (qCHPT) to one loop are computed in closed form. We show how the quenched chiral logarithms can be reabsorbed in the renormalization of the B0 parameter of the leading order Lagrangian. Finally, we do the chiral powe

  18. Thermal quenching and electron traps in LSO

    Energy Technology Data Exchange (ETDEWEB)

    Kappers, L.A. E-mail: kappers@uconnvm.uconn.edu; Bartram, R.H.; Hamilton, D.S.; Lempicki, A.; Glodo, J

    2003-05-01

    It is demonstrated by comparison of thermoluminescence and scintillation light outputs of LSO as functions of radiation time that a previously suggested thermal quenching correction is inappropriate. Approximate solutions of rate equations are employed to infer absolute trap concentrations and to explore the effects of thermal quenching on the shapes of thermoluminescence glow curves.

  19. MSFC Electrostatic Levitator (ESL) Rapid Quench System

    Science.gov (United States)

    SanSoucie, Michael P.; Craven, Paul D.; Rogers, Jan R.

    2014-01-01

    The NASA Marshall Space Flight Center (MSFC) Electrostatic Levitator (ESL) Laboratory is a unique facility for investigators studying high-temperature materials. The laboratory boasts two levitators in which samples can be levitated, heated, melted, undercooled, and resolidified, all without the interference of a container or data-gathering instrument. The ESL main chamber has been upgraded with the addition of a rapid quench system. This system allows samples to be dropped into a quench vessel that can be filled with a low melting point material, such as a gallium or indium alloy. Thereby allowing rapid quenching of undercooled liquid metals. Up to 8 quench vessels can be loaded into the quench wheel, which is indexed with LabVIEW control software. This allows up to 8 samples to be rapidly quenched before having to open the chamber. The system has been tested successfully on several zirconium samples. Future work will be done with other materials using different quench mediums. Microstructural analysis will also be done on successfully quench samples.

  20. Transient Loschmidt echo in quenched Ising chains

    Science.gov (United States)

    Lupo, Carla; Schiró, Marco

    2016-07-01

    We study the response to sudden local perturbations of highly excited quantum Ising spin chains. The key quantity encoding this response is the overlap between time-dependent wave functions, which we write as a transient Loschmidt Echo. Its asymptotics at long time differences contain crucial information about the structure of the highly excited nonequilibrium environment induced by the quench. We compute the echo perturbatively for a weak local quench but for arbitrarily large global quench, using a cumulant expansion. Our perturbative results suggest that the echo decays exponentially, rather than power law as in the low-energy orthogonality catastrophe, a further example of quench-induced decoherence already found in the case of quenched Luttinger liquids. The emerging decoherence scale is set by the strength of the local potential and the bulk excitation energy.

  1. Finite Element Simulation of Metal Quenching

    Institute of Scientific and Technical Information of China (English)

    方刚; 曾攀

    2004-01-01

    The evolution of the phase transformation and the resulting internal stresses and strains in metallic parts during quenching were modeled numerically. The numerical simulation of the metal quenching process was based on the metallo-thermo-mechanical theory using the finite element method to couple the temperature, phase transformation, and stress-strain fields. The numerical models are presented for the heat treatment and kinetics of the phase transformation. The finite element models and the phase transition kinetics accurately predict the distribution of the microstructure volume fractions, the temperature, the distortion, and the stress-strain relation during quenching. The two examples used to validate the models are the quenching of a small gear and of a large turbine rotor. The simulation results for the martensite phase volume fraction, the stresses, and the distortion in the gear agree well with the experimental data. The models can be used to optimize the quenching conditions to ensure product quality.

  2. Quench Heater Studies for the LHC Magnets

    CERN Document Server

    Rodríguez-Mateos, F

    2001-01-01

    About 2000 LHC (CERN's Large Hadron Collider) superconducting magnets will be protected with quench heaters against development of excessive voltage and overheating after a resistive transition. The quench heater strips are powered by capacitor bank discharge power supplies. The strips are made of stainless steel partially plated with copper to reduce their resistance and to allow for the connection of quench heaters in series. The strips are embedded in between two polyimide foils. The initial power density and the current decay time determine the quench heater effectiveness. Since only one type of heater power supply will be available, the copper plating cycle is adapted for the various magnet types to keep the resistance of the heater circuit constant. Different quench heater designs have been tested on various prototype magnets to optimise the copper-plating cycle and the electric insulation of the heater strip. This paper summarises the experimental results and computations that allowed to finalise the h...

  3. QUENCH STUDIES AND PREHEATING ANALYSIS OF SEAMLESS

    Energy Technology Data Exchange (ETDEWEB)

    Palczewski, Ari [JLAB; Geng, Rongli [JLAB; Eremeev, Grigory [JLAB

    2013-09-01

    One of the alternative manufacturing technologies for SRF cavities is hydroforming from seamless tubes. Although this technology has produced cavities with gradient and Q-values comparable to standard EBW/EP cavities, a few questions remain. One of these questions is whether the quench mechanism in hydroformed cavities is the same as in standard electron beam welded cavities. Towards this effort Jefferson Lab performed quench studies on 2 9 cell seamless hydroformed cavities. These cavities include DESY's - Z163 and Z164 nine-cell cavities hydroformed at DESY. Initial Rf test results Z163 were published in SRF2011. In this report we will present post JLAB surface re-treatment quench studies for each cavity. The data will include OST and T-mapping quench localization as well as quench location preheating analysis comparing them to the observations in standard electron beam welded cavities.

  4. Quenching of two conformers of the naphthalene derivative, nabumetone, in water

    Energy Technology Data Exchange (ETDEWEB)

    Valero, M. [Departamento de Quimica Fisica, Facultad de Farmacia, Universidad de Salamanca, Salamanca 37007 (Spain)], E-mail: mvalero@usal.es; Lopez-Cornejo, P. [Departamento de Quimica Fisica, Facultad de Ciencias Quimicas, Universidad de Sevilla, Sevilla (Spain); Costa, S.M.B. [Centro de Quimica Estrutural, Instituto Superior Tecnico, Universidade Tecnica de Lisboa, Lisboa 1049 (Portugal)

    2008-08-15

    The quenching of the anti-inflammatory drug nabumetone by iodide was studied by means of steady-state and time-resolved fluorescence techniques. A downward curvature in the Stern-Volmer plot was observed. This behaviour has been interpreted based on the existence of two conformers of the drug that interact with the quencher with different ability, plus the low quenching efficiency of the quencher for both conformers. A drug quencher ground state complex was observed to be formed through an electron transfer from the iodide to the naphthalene ring of the nabumetone.

  5. Conjugation of fluorescent proteins with DNA oligonucleotides.

    Science.gov (United States)

    Lapiene, Vidmantas; Kukolka, Florian; Kiko, Kathrin; Arndt, Andreas; Niemeyer, Christof M

    2010-05-19

    This work describes the synthesis of covalent ssDNA conjugates of six fluorescent proteins, ECFP, EGFP, E(2)GFP, mDsRed, Dronpa, and mCherry, which were cloned with an accessible C-terminal cystein residue to enable site-selective coupling using a heterobispecific cross-linker. The resulting conjugates revealed similar fluorescence emission intensity to the unconjugated proteins, and the functionality of the tethered oligonucleotide was proven by specific Watson-Crick base pairing to cDNA-modified gold nanoparticles. Fluorescence spectroscopy analysis indicated that the fluorescence of the FP is quenched by the gold particle, and the extent of quenching varied with the intrinsic spectroscopic properties of FP as well as with the configuration of surface attachment. Since this study demonstrates that biological fluorophores can be selectively incorporated into and optically coupled with nanoparticle-based devices, applications in DNA-based nanofabrication can be foreseen.

  6. Chlorophyll fluorescence characteristics of Amaranthus tricolor L.under high temperature stress%高温胁迫下苋菜的叶绿素荧光特性

    Institute of Scientific and Technical Information of China (English)

    陈梅; 唐运来

    2013-01-01

    为了探明高温胁迫对苋菜(Amaranthus tricolor L.)光合过程的影响,用不同温度(25、30、35、40、45℃)处理苋菜植株1h后,随即测定了其叶绿素荧光动力学参数和快速光响应曲线特征参数的变化.结果表明:40℃以上高温胁迫下,苋菜叶片的光系统Ⅱ(PSⅡ)潜在光化学效率(Fv/Fo)、最大光化学效率(Fv/Fm)下降;最大荧光(Fm)、光合电子传递速率(ETR)、PSⅡ实际光化学效率(Yield)、光化学淬灭系数(qP)也均有所下降;而初始荧光(F.)和非光化学淬灭系数(NPQ)在40℃以上高温胁迫下显著上升.叶绿素荧光快速光响应曲线测定结果表明,初始斜率α、最大相对电子传递速率ETRmax和半饱和光强Ik在40℃以上高温胁迫下有所下降.研究表明,40℃以上高温胁迫对苋菜的光能的吸收、转换、光合电子传递和强光耐受能力等均有一定的影响.%Amaranth (Amaranthus tricolor L.) plants were exposed to several temperature levels (25,30,35,40,and 45 ℃) for 1 h,and then,the characteristic parameters of chlorophyll fluorescence and the rapid light response curves of photosynthesis were measured,aimed to understand the effects of high temperature stress on the photosynthesis process of amaranth.High temperature stress (>40 ℃) decreased the maximum fluorescence (Fm),potential photochemical efficiency (Fv/Fo),and maximum photochemical efficiency of PS Ⅱ (Fv/Fm).Simultaneously,the electron transport rate (ETR),actual photochemical efficiency of PS Ⅱ (Yield),and photochemical quenching coefficient (qP) also had some decrease.In contrast,the initial fluorescence (Fo) and non-photochemical quenching coefficient (NPQ) were increased significantly.The initial slope rate (a),maximum apparent electron transport rates (ETRmax),and half-saturation light intensity (Ik) under high temperature stress also had some decline.These results indicated that the photosynthesis of A.tricolor plants was very sensitive to high

  7. Jet quenching from QCD evolution

    Science.gov (United States)

    Chien, Yang-Ting; Emerman, Alexander; Kang, Zhong-Bo; Ovanesyan, Grigory; Vitev, Ivan

    2016-04-01

    Recent advances in soft-collinear effective theory with Glauber gluons have led to the development of a new method that gives a unified description of inclusive hadron production in reactions with nucleons and heavy nuclei. We show how this approach, based on the generalization of the DGLAP evolution equations to include final-state medium-induced parton shower corrections for large Q2 processes, can be combined with initial-state effects for applications to jet quenching phenomenology. We demonstrate that the traditional parton energy loss calculations can be regarded as a special soft-gluon emission limit of the general QCD evolution framework. We present phenomenological comparison of the SCETG -based results on the suppression of inclusive charged hadron and neutral pion production in √{sNN }=2.76 TeV lead-lead collisions at the Large Hadron Collider to experimental data. We also show theoretical predictions for the upcoming √{sNN }≃5.1 TeV Pb +Pb run at the LHC.

  8. Amide-based Fluorescent Macrocyclic Anion Receptors

    Institute of Scientific and Technical Information of China (English)

    ZENG, Zhen-Ya(曾振亚); XU, Kuo-Xi(徐括喜); HE, Yong-Bing(何永炳); LIU, Shun-Ying(刘顺英); WU, Jin-Long(吴进龙); WEI, Lan-Hua(隗兰华); MENG, Ling-Zhi(孟令芝)

    2004-01-01

    Two fluorescent anion receptors (1 and 2) based on amide macrocycle were synthesized and corresponding fluorescence quenching induced by anion complexation was observed in different degree. Receptors form 1: 1 complexes with anions by hydrogen bonding interactions. Receptor 1 bound anions in the order of F->Cl->H2PO4->CH3COO->>Br-, I- and receptor 2 showed high selectivity to F- over other anions.

  9. Quenching phenomena in natural circulation loop

    Energy Technology Data Exchange (ETDEWEB)

    Umekawa, Hisashi; Ozawa, Mamoru [Kansai Univ., Osaka (Japan); Ishida, Naoki [Daihatsu Motor Company, Osaka (Japan)

    1995-09-01

    Quenching phenomena has been investigated experimentally using circulation loop of liquid nitrogen. During the quenching under natural circulation, the heat transfer mode changes from film boiling to nucleate boiling, and at the same time flux changes with time depending on the vapor generation rate and related two-phase flow characteristics. Moreover, density wave oscillations occur under a certain operating condition, which is closely related to the dynamic behavior of the cooling curve. The experimental results indicates that the occurrence of the density wave oscillation induces the deterioration of effective cooling of the heat surface in the film and the transition boiling regions, which results in the decrease in the quenching velocity.

  10. 施氮量对超级杂交中稻生育后期剑叶叶绿素荧光特性的影响%Effects of Nitrogen Fertilizer Level on Chlorophyll Fluorescence Characteristic in Flag Leaf of Super Hybrid Rice at Late Growth Stage

    Institute of Scientific and Technical Information of China (English)

    龙继锐; 马国辉; 万宜珍; 宋春芳; 孙健

    2011-01-01

    To compare the effects of nitrogen fertilizer level on chlorophyll fluorescence characteristics in super hyhrid rice flag leaves, a field fertilizer (slow release nitrogen) experiment was conducted with a super hybrid rice Y Liang you 1 as material. The photosynthetic electron transport rate ( KTR). Effective quantum yield ( EQY), photochemical quenching coefficient(qp), and non-photochemical quenching coefficient NPQ) of flag leaves were measured at the heading, full heading, 10 d after full heading, 20 d after full heading. The results indicated that the ETR and EQY were increased from heading to 20 d after full heading, whereas, the NPQ decreased. During the same period, ETR. EQY, qv increased firstly and then decreased with increasing nitrogen level. The KTR and EQY at 135 kg/hm2 nitrogen level were the highest. In conclusion, the adaptive nitrogen amount for photosynthesis were 135 - 180 kg/hm2.%以缓释氮肥为材料,采用快速光曲线分析方法,比较研究了大田条件下6种施氮水平对超级杂交稻Y两优1号抽穗到蜡熟期剑叶叶1绿素荧光动力参数的影响.结果表明,抽穗到齐穗后20 d,剑叶光合电子传递速率(ETR)、有效量子产量(EQY)和光化学猝系数(qp)均随时问推进而提高,非光化学碎灭系数(NPQ)则呈下降趋势;同一时期,ETR,EQY,qp均表现为随施氮量增加先增后减,但最高值的施氮量均不同;不同时期,ETR和EQY均以施氮135 kg/hm2时最高.综合来看,本试验条件下,施氮量以135-180 kg/hm2时叶绿素荧光指标组合最优.

  11. Fluorescence of dyes adsorbed on highly organized nanostructured gold surfaces

    NARCIS (Netherlands)

    Levi, Stefano A.; Mourran, Ahmed; Spatz, Joachim P.; Veggel, van Frank C.J.M.; Reinhoudt, David N.; Möller, M.

    2002-01-01

    It is shown that fluorescent dyes can be adsorbed selectively on gold nanoparticles which are immobilized on a glass substrate and that the fluorescence originating from the adsorbed dyes exhibits significantly less quenching when compared to dyes adsorbed on bulk gold. Self-assembled monolayers of

  12. Inner filter correction of dissolved organic matter fluorescence

    DEFF Research Database (Denmark)

    Kothawala, D.N.,; Murphy, K.R.; Stedmon, Colin

    2013-01-01

    The fluorescence of dissolved organic matter (DOM) is suppressed by a phenomenon of self-quenching known as the inner filter effect (IFE). Despite widespread use of fluorescence to characterize DOM in surface waters, the advantages and constraints of IFE correction are poorly defined. We assessed...

  13. Rose bengal in poly(2-hydroxyethyl methacrylate) thin films: self-quenching by photoactive energy traps

    Science.gov (United States)

    Ezquerra Riega, Sergio D.; Rodríguez, Hernán B.; San Román, Enrique

    2017-03-01

    The effect of dye concentration on the fluorescence,ΦF, and singlet molecular oxygen,ΦΔ, quantum yields of rose bengal loaded poly(2-hydroxyethyl methacrylate) thin films (∼200 nm thick) was investigated, with the aim of understanding the effect of molecular interactions on the photophysical properties of dyes in crowded constrained environments. Films were characterized by absorption and fluorescence spectroscopy, singlet molecular oxygen (1O2) production was quantified using a chemical monitor, and the triplet decay was determined by laser flash-photolysis. For the monomeric dilute dye, ΦF = 0.05 ± 0.01 and ΦΔ = 0.76 ± 0.14. The effect of humidity and the photostability of the dye were also investigated. Spectral changes in absorption and fluorescence in excess of 0.05 M and concentration self-quenching after 0.01 M are interpreted in the context of a quenching radius model. Calculations of energy migration and trapping rates were performed assuming random distribution of the dye. Best fits of fluorescence quantum yields with concentration are obtained in the whole concentration range with a quenching radius r Q = 1.5 nm, in the order of molecular dimensions. Agreement is obtained only if dimeric traps are considered photoactive, with an observed fluorescence quantum yield ratio ΦF,trap/ΦF,monomer ≈ 0.35. Fluorescent traps are capable of yielding triplet states and 1O2. Results show that the excited state generation efficiency, calculated as the product between the absorption factor and the fluorescence quantum yield, is maximized at around 0.15 M, a very high concentration for random dye distributions. Relevant information for the design of photoactive dyed coatings is provided.

  14. Torus CLAS12-Superconducting Magnet Quench Analysis

    Energy Technology Data Exchange (ETDEWEB)

    Kashikhin, V S; Elouadhiri, L; Ghoshal, P K; Kashy, D; Makarov, A; Pastor, O; Quettier, L; Velev, G; Wiseman, M

    2014-06-01

    The JLAB Torus magnet system consists of six superconducting trapezoidal racetrack-type coils assembled in a toroidal configuration. These coils are wound with SSC-36 Nb-Ti superconductor and have the peak magnetic field of 3.6 T. The first coil manufacturing based on the JLAB design began at FNAL. The large magnet system dimensions (8 m diameter and 14 MJ of stored energy) dictate the need for quench protection. Each coil is placed in an aluminum case mounted inside a cryostat and cooled by 4.6 K supercritical helium gas flowing through a copper tube attached to the coil ID. The large coil dimensions and small cryostat thickness drove the design to challenging technical solutions, suggesting that Lorentz forces due to transport currents and eddy currents during quench and various failure scenarios are analyzed. The paper covers the magnet system quench analysis using the OPERA3d Quench code.

  15. Temperature Profiles During Quenches in LHC Superconducting Dipole Magnets Protected by Quench Heaters

    CERN Document Server

    Maroussov, V; Siemko, A

    2000-01-01

    The efficiency of the magnet protection by quench heaters was studied using a novel method which derives the temperature profile in a superconducting magnet during a quench from measured voltage signals. In several Large Hadron Collider single aperture dipole models, temperature profiles and temperature gradients in the magnet coil have been evaluated in the case of protection by different sets of quench heaters and different powering and protection parameters. The influence of the insulation thickness between the quench heaters and the coil has also been considered. The results show clear correlation between the positions of quench heaters, magnet protection parameters and temperature profiles. This study allowed a better understanding of the quench process mechanisms and the efficiency assessment of the different protection schemes.

  16. Investigation of the Interaction between Adenosine and Human Serum Albumin by Fluorescent Spectroscopy and Molecular Modeling

    Institute of Scientific and Technical Information of China (English)

    CUI Feng-Ling; WANG Jun-Li; LI Fang; FAN Jing; QU Gui-Rong; YAO Xiao-Jun; LEI Bei-Lei

    2008-01-01

    The binding interaction of adenosine with human serum albumin (HSA) was investigated under simulative physiological conditions by fluorescence spectroscopy in combination with a molecular modeling method. A strong fluorescence quenching reaction of adenosine to HSA was observed and the quenching mechanism was suggested as static quenching according to the Stern-Volmer equation. The binding constants (K) at different temperatures as well as thermodynamic parameters, enthalpy change (ΔH) and entropy change (ΔS), were calculated according to relevant fluorescent data and Vant'Hoff equation. The hydrophobic interaction was a predominant intermolecular force in order to stabilize the complex, which was in agreement with the results of molecular modeling study.

  17. Time-resolved fluorescence analysis of the mobile flavin cofactor in -hydroxybenzoate hydroxylase

    Indian Academy of Sciences (India)

    Petra A W Van Den Berg; Koert Grever; Arie Van Hoek; Willem J H Van Berkel; Antonie J W G Visser

    2007-03-01

    Conformational heterogeneity of the FAD cofactor in -hydroxybenzoate hydroxylase (PHBH) was investigated with time-resolved polarized flavin fluorescence. For binary enzyme/substrate (analogue) complexes of wild-type PHBH and Tyr222 mutants, crystallographic studies have revealed two distinct flavin conformations; the `in’ conformation with the isoalloxazine ring located in the active site, and the `out’ conformation with the isoalloxazine ring disposed towards the protein surface. Fluorescence-lifetime analysis of these complexes revealed similar lifetime distributions for the `in’ and `out’ conformations. The reason for this is twofold. First, the active site of PHBH contains various potential fluorescence-quenching sites close to the flavin. Fluorescence analysis of uncomplexed PHBH Y222V and Y222A showed that Tyr222 is responsible for picosecond fluorescence quenching free enzyme. In addition, other potential quenching sites, including a tryptophan and two tyrosines involved in substrate binding, are located nearby. Since the shortest distance between these quenching sites and the isoalloxazine ring differs only little on average, these aromatic residues are likely to contribute to fluorescence quenching. Second, the effect of flavin conformation on the fluorescence lifetime distribution is blurred by binding of the aromatic substrates: saturation with aromatic substrates induces highly efficient fluorescence quenching. The flavin conformation is therefore only reflected in the small relative contributions of the longer lifetimes.

  18. The surprising inefficiency of dwarf satellite quenching

    CERN Document Server

    Wheeler, Coral; Cooper, Michael C; Boylan-Kolchin, Mike; Bullock, James S

    2014-01-01

    We study dwarf satellite galaxy quenching using observations from the Geha et al. (2012) NSA/SDSS catalog together with LCDM cosmological simulations to facilitate selection and interpretation. We show that fewer than 30% of dwarfs (M* ~ 10^8.5-10^9.5 Msun) identified as satellites within massive host halos (Mhost ~ 10^12.5-10^14 Msun) are quenched, in spite of the expectation from simulations that half of them should have been accreted more than 6 Gyr ago. We conclude that whatever the action triggering environmental quenching of dwarf satellites, the process must be highly inefficient. We investigate a series of simple, one-parameter quenching models in order understand what is required to explain the low quenched fraction and conclude that either the quenching timescale is very long (> 9.5 Gyr, a "slow starvation" scenario) or that the environmental trigger is not well matched to accretion within the virial volume. We discuss these results in light of the fact that most of the low mass dwarf satellites in ...

  19. O2(a1Δ) Quenching In The O/O2/O3 System

    Science.gov (United States)

    Azyazov, V. N.; Mikheyev, P. A.; Postell, D.; Heaven, M. C.

    2010-10-01

    The development of discharge singlet oxygen generators (DSOG's) that can operate at high pressures is required for the power scaling of the discharge oxygen iodine laser. In order to achieve efficient high-pressure DSOG operation it is important to understand the mechanisms by which singlet oxygen (O2(a1Δ)) is quenched in these devices. It has been proposed that three-body deactivation processes of the type O2(a1Δ)+O+M→2O2+M provide significant energy loss channels. To further explore these reactions the physical and reactive quenching of O2(a1Δ) in O(3P)/O2/O3/CO2/He/Ar mixtures has been investigated. Oxygen atoms and singlet oxygen molecules were produced by the 248 nm laser photolysis of ozone. The kinetics of O2(a1Δ) quenching were followed by observing the 1268 nm fluorescence of the O2a1Δ-X3∑ transition. Fast quenching of O2(a1Δ) in the presence of oxygen atoms and molecules was observed. The mechanism of the process has been examined using kinetic models, which indicate that quenching by vibrationally excited ozone is the dominant reaction.

  20. Quenching of the electrochemiluminescence of Ru(bpy)₃²⁺/TPA by malachite green and crystal violet.

    Science.gov (United States)

    Huang, Baomei; Zhou, Xibin; Xue, Zhonghua; Wu, Guofan; Du, Jie; Luo, Di; Liu, Tao; Ru, Jing; Lu, Xiaoquan

    2013-03-15

    Efficient and stable quenching of electrochemiluminescence of Ru(bpy)3(2+)/TPA by malachite green(MG) and crystal violet(CV) at the glass carbon (GC) electrode is reported. A novel quenching mechanism has been proposed. Resonance energy transfer from the excited-state luminophore Ru(bpy)3(2+*) to MG/CV and dynamic quenching are suggested as the mechanism for quenching ECL. The quenching mechanism is discussed in detail based on UV-visible absorption spectra, cyclic voltammograms, ECL curves and fluorescence methods. MG shows more efficient quenching than CV. Moreover, the quenched ECL intensity versus the concentration of MG and CV are linear over the concentration ranges of 8 × 10(-10)-8 × 10(-7)M and 3.46 × 10(-9)-5.5 × 10(-7)M, respectively. The corresponding limit of detection (LOD) was 1.0 × 10(-10)M for MG and 1.1 × 10(-10)M for CV (S/N=3).

  1. Two-dimensional fluorescence correlation spectroscopy IV: Resolution of fluorescence of tryptophan residues in alcohol dehydrogenase and lysozyme

    Science.gov (United States)

    Fukuma, Hiroaki; Nakashima, Kenichi; Ozaki, Yukihiro; Noda, Isao

    2006-11-01

    Generalized two-dimensional (2D) fluorescence correlation spectroscopy has been used to resolve the fluorescence spectra of two tryptophan (Trp) residues in alcohol dehydrogenase and lysozyme. In each protein, one Trp residue is buried in a hydrophobic domain of the protein matrix and the other Trp residue is located at a hydrophilic domain close to the protein-water interface. Fluorescence quenching by iodide ion, a hydrophilic quencher, was employed as a perturbation to induce the intensity change in the spectra. The Trp residue which is located at the hydrophilic domain is effectively quenched by the quencher, while the Trp residue located at the hydrophobic domain is protected from the quenching. Therefore, the fluorescence of these two Trp residues have a different sensitivity to the quenching, showing a different response to the concentration of the quencher. Fluorescence spectra of the two Trp residues in alcohol dehydrogenase, which are heavily overlapped in conventional one-dimensional spectra, have been successfully resolved by the 2D correlation technique. From the asynchronous correlation map, it was revealed that the quenching of Trp located at the hydrophobic part was brought about after that of Trp located at the hydrophilic part. In contrast, the fluorescence spectra of the two Trp residues could not be resolved after the alcohol dehydrogenase was denatured with guanidine hydrochloride. These results are consistent with the well-known structure of alcohol dehydrogenase. Furthermore, it was elucidated that the present 2D analysis is not interfered by Raman bands of the solvent, which sometimes bring difficulty into the conventional fluorescence analysis. Fluorescence spectra of the Trp residues in lysozyme could not be resolved by the 2D correlation technique. The differences between the two proteins are attributed to the fact that the Trp residue in the hydrophobic site of lysozyme is not sufficiently protected from the quenching.

  2. Secondary Heating Under Quenching Cooling of Aluminum Alloys

    Science.gov (United States)

    Tsukrov, S. L.; Ber, L. B.

    2017-07-01

    Variants of secondary heating of aluminum alloys are considered, i.e., under quenching of plates in a water tank or on a horizontal quenching unit with water jet cooling, under continuous quenching of strips, and under quenching of tubes in vertical furnaces. Recommendation are given for removal or substantial reduction of the intensity of secondary heating under industrial conditions.

  3. Fluorescence of Alexa fluor dye tracks protein folding.

    Science.gov (United States)

    Lindhoud, Simon; Westphal, Adrie H; Visser, Antonie J W G; Borst, Jan Willem; van Mierlo, Carlo P M

    2012-01-01

    Fluorescence spectroscopy is an important tool for the characterization of protein folding. Often, a protein is labeled with appropriate fluorescent donor and acceptor probes and folding-induced changes in Förster Resonance Energy Transfer (FRET) are monitored. However, conformational changes of the protein potentially affect fluorescence properties of both probes, thereby profoundly complicating interpretation of FRET data. In this study, we assess the effects protein folding has on fluorescence properties of Alexa Fluor 488 (A488), which is commonly used as FRET donor. Here, A488 is covalently attached to Cys69 of apoflavodoxin from Azotobacter vinelandii. Although coupling of A488 slightly destabilizes apoflavodoxin, the three-state folding of this protein, which involves a molten globule intermediate, is unaffected. Upon folding of apoflavodoxin, fluorescence emission intensity of A488 changes significantly. To illuminate the molecular sources of this alteration, we applied steady state and time-resolved fluorescence techniques. The results obtained show that tryptophans cause folding-induced changes in quenching of Alexa dye. Compared to unfolded protein, static quenching of A488 is increased in the molten globule. Upon populating the native state both static and dynamic quenching of A488 decrease considerably. We show that fluorescence quenching of Alexa Fluor dyes is a sensitive reporter of conformational changes during protein folding.

  4. Fluorescence of Alexa fluor dye tracks protein folding.

    Directory of Open Access Journals (Sweden)

    Simon Lindhoud

    Full Text Available Fluorescence spectroscopy is an important tool for the characterization of protein folding. Often, a protein is labeled with appropriate fluorescent donor and acceptor probes and folding-induced changes in Förster Resonance Energy Transfer (FRET are monitored. However, conformational changes of the protein potentially affect fluorescence properties of both probes, thereby profoundly complicating interpretation of FRET data. In this study, we assess the effects protein folding has on fluorescence properties of Alexa Fluor 488 (A488, which is commonly used as FRET donor. Here, A488 is covalently attached to Cys69 of apoflavodoxin from Azotobacter vinelandii. Although coupling of A488 slightly destabilizes apoflavodoxin, the three-state folding of this protein, which involves a molten globule intermediate, is unaffected. Upon folding of apoflavodoxin, fluorescence emission intensity of A488 changes significantly. To illuminate the molecular sources of this alteration, we applied steady state and time-resolved fluorescence techniques. The results obtained show that tryptophans cause folding-induced changes in quenching of Alexa dye. Compared to unfolded protein, static quenching of A488 is increased in the molten globule. Upon populating the native state both static and dynamic quenching of A488 decrease considerably. We show that fluorescence quenching of Alexa Fluor dyes is a sensitive reporter of conformational changes during protein folding.

  5. Quench Protection of DI-BSCCO Coil

    Science.gov (United States)

    Yamaguchi, T.; Ueno, E.; Kato, T.; Hayashi, K.

    Quench protection is one of the most important requirements for the practical application of high-temperature-superconducting (HTS) coils. Quench protection requires that early detection of a developing quench event is followed by rapid reduction of the operating current. However, such quench detection is very difficult because HTS wire produces heat only locally due to the very slow propagation velocity of a normal zone. Excellent high voltage insulation performance is required if the current is to be reduced rapidly in a large-scale superconducting application with very large inductance. Thus it is important to investigate the behavior of coils with various decay time constants, and to detect voltages on very short time scales. This goal remains to be achieved. In the present study we built test coil and a full-scale pole coil for a 20 MW motor for use in experiments on quench protection, and parameterized the relation between the decay time constant and the detecting voltage, using a conventional balance circuit to detect the quench, which was generated by gradually raising the temperature of the coils. The results verify that a balance circuit can be used for quench detection. For example, when the current decay time constant is 4 seconds, the test coil can be protected even with a detecting voltage of 0.15 volts, despite a significant heat production rate of 126 W. We also confirmed that the full-scale pole coil, with a decay time constant of 20 seconds, can be protected with a detecting voltage of 0.06 V.

  6. Binding of several benzodiazepines to bovine serum albumin: Fluorescence study

    Science.gov (United States)

    Machicote, Roberta G.; Pacheco, María E.; Bruzzone, Liliana

    2010-10-01

    The interactions of lorazepam, oxazepam and bromazepam with bovine serum albumin (BSA) were studied by fluorescence spectrometry. The Stern-Volmer quenching constants and corresponding thermodynamic parameters Δ H, Δ G and Δ S were calculated. The binding constants and the number of binding sites were also investigated. The distances between the donor (BSA) and the acceptors (benzodiazepines) were obtained according to fluorescence resonance energy transfer and conformational changes of BSA were observed from synchronous fluorescence spectra.

  7. Fluorescence spectroscopy

    DEFF Research Database (Denmark)

    Bagatolli, Luis

    2016-01-01

    Fluorescence spectroscopy is a powerful experimental tool used by scientists from many disciplines. During the last decades there have been important developments on distinct fluorescence methods, particularly those related to the study of biological phenomena. This chapter discusses...

  8. Effects of quenching and partial quenching on QCD penguin matrix elements

    NARCIS (Netherlands)

    Golterman, Maarten; Pallante, Elisabetta

    2002-01-01

    We point out that chiral transformation properties of penguin operators change in the transition from unquenched to (partially) quenched QCD. The way in which this affects the lattice determination of weak matrix elements can be understood in the framework of (partially) quenched chiral perturbation

  9. Quench absorption coils: a quench protection concept for high-field superconducting accelerator magnets

    Science.gov (United States)

    Mentink, M.; Salmi, T.

    2017-06-01

    A quench protection concept based on coupled secondary coils is studied for inductively transferring energy out of a quenching superconducting dipole and thus limiting the peak hotspot temperature. So-called ‘quench absorption coils’ are placed in close proximity to the superconducting coils and are connected in series with a diode for the purpose of preventing current transformation during regular operation. During a quench, current is then transformed into the quench absorption coils so that a significant fraction of the stored magnetic energy is dissipated in the these coils. Numerical calculations are performed to determine the impact of such a concept and to evaluate the dimensions of the quench absorption coils needed to obtain significant benefits. A previously constructed 15 T Nb3Sn block coil is taken as a reference layout. Finite-element calculations are used to determine the combined inductive and thermal response of this system and these calculations are validated with a numerical model using an adiabatic approximation. The calculation results indicate that during a quench the presence of the quench absorption coils reduces the energy dissipated in the superconducting coils by 45% and reduces the hotspot temperature by over 100 K. In addition, the peak resistive voltage over the superconducting coils is significantly reduced. This suggests that this concept may prove useful for magnet designs in which the hotspot temperature is a design driver.

  10. Lasing from fluorescent protein crystals.

    Science.gov (United States)

    Oh, Heon Jeong; Gather, Malte C; Song, Ji-Joon; Yun, Seok Hyun

    2014-12-15

    We investigated fluorescent protein crystals for potential photonic applications, for the first time to our knowledge. Rod-shaped crystals of enhanced green fluorescent protein (EGFP) were synthesized, with diameters of 0.5-2 μm and lengths of 100-200 μm. The crystals exhibit minimal light scattering due to their ordered structure and generate substantially higher fluorescence intensity than EGFP or dye molecules in solutions. The magnitude of concentration quenching in EGFP crystals was measured to be about 7-10 dB. Upon optical pumping at 485 nm, individual EGFP crystals located between dichroic mirrors generated laser emission with a single-mode spectral line at 513 nm. Our results demonstrate the potential of protein crystals as novel optical elements for self-assembled, micro- or nano-lasers and amplifiers in aqueous environment.

  11. Fluorescence properties of 3-amino phenylboronic acid and its interaction with glucose and ZnS:Cu quantum dots.

    Science.gov (United States)

    Kur-Kowalska, Karolina; Przybyt, Małgorzata; Ziółczyk, Paulina; Sowiński, Przemysław; Miller, Ewa

    2014-08-14

    Preliminary results of a study of the interaction between 3-amino phenylboronic acid and glucose or ZnS:Cu quantum dots are presented in this paper. ZnS:Cu quantum dots with mercaptopropionic acid as a capping agent were obtained and characterized. Quenching of 3-amino phenylboronic acid fluorescence was studied by steady-state and timeresolved measurements. For fluorescence quenching with glucose the results of steady-state measurements fulfill Stern-Volmer equation. The quenching constants are increasing with growing pH. The decay of fluorescence is monoexponential with lifetime about 8.4 ns, which does not depend on pH and glucose concentration indicating static quenching. The quenching constant can be interpreted as apparent equilibrium constant of estrification of boronic group with diol. Quantum dots are also quenching 3-amino phenylboronic acid fluorescence. Fluorescence lifetime, in this case, is slightly decreasing with increasing concentration of quantum dots. The quenching constants are increasing slightly with pH's growth. Quenching mechanism of 3-amino phenylboronic acid fluorescence by quantum dots needs further experiments to be fully explained.

  12. Fluorescence signalling of the transition metal ions: Design strategy based on the choice of the fluorophore component

    Indian Academy of Sciences (India)

    N B Sankaran; S Banthia; A Samanta

    2002-12-01

    Transition metal ions are notorious for their fluorescence quenching abilities. In this paper, we discuss the design strategies for the development of efficient off-on fluorescence signalling systems for the transition metal ions. It is shown that even simple fluorophore-spacer-receptor systems can display excellent off-on fluorescence signalling towards the quenching metal ions when the fluorophore component is chosen judiciously.

  13. Effects of foliar spraying methyl jasmonate on leaf chlorophyll fluorescence characteristics of flue-cured tobacco seedlings under drought and re-watering%茉莉酸甲酯对干旱及复水条件下烤烟幼苗叶绿素荧光特性的影响

    Institute of Scientific and Technical Information of China (English)

    金微微; 王炎; 张会慧; 焦志丽; 王鹏; 李鑫; 岳冰冰; 孙广玉

    2011-01-01

    以烤烟品种“龙江911”为试验材料,研究了干旱及复水过程中外源茉莉酸甲酯(Me-JA)对移栽后烤烟幼苗叶绿素含量和叶绿素荧光特性的影响.结果表明:干旱下烤烟幼苗叶绿素含量、PSⅡ反应中心完全关闭时荧光产量(Fm)、PSⅡ潜在活性(Fv/Fo)、最大光化学效率(Fv/Fm)、实际光化学效率(φPSⅡ)、表观电子传递速率(ETR)和光化学猝灭系数(qp)下降,而初始荧光(Fo)和非光化学猝灭系数(qN)升高,0.2和0.5 mmol·L-1的外源MeJA明显减缓了干旱下烤烟幼苗Fv/Fm、Fv /Fo、φPsⅡ、ETR、qP的下降和qN的上升,而1.0 mmol·L-1 MeJA效果不明显.复水后,烤烟幼苗各项叶绿素荧光指标均有明显恢复,并且MeJA处理后的幼苗恢复更明显.表明外源MeJA减轻了干旱胁迫下烤烟叶片叶绿素的分解,对PSⅡ反应中心起到一定的保护作用,提高了电子传递速率,降低了干旱胁迫对烤烟幼苗的伤害,并且复水后叶绿素含量和叶绿素荧光参数能迅速恢复,从而保证了经干旱胁迫后烤烟幼苗能迅速缓苗.%Taking the flue-cured tobacco variety of "Longjiang 911" from Heilongjiang Province of Northeast China as test material, a pot experiment was conducted to study the effects of foliar spraying different concentration methyl jasmonate ( MeJA) on the seedlings leaf chlorophyll content and chlorophyll fluorescence characteristics during the transplantation stage under drought and re-watering. Under drought condition, the leaf chlorophyll content, maximum fluorescence ( Fm ) , potential activities of PSII (Fv/Fo) , maximum photochemical efficiency ( Fv/Fm ) , actual photochemical efficiency ( φpsⅡ ) , apparent electron transport rate (ETR), and photochemical quenching ( qp) decreased, but the minimal fluorescence ( Fo) and non-photochemical quenching ( qN ) increased. Foliar spraying 0. 2 and 0. 5 mmol · L-1 of MeJA had obvious positive effects in mitigating the decrease of Fv/Fm, Fv

  14. Topological blocking in quantum quench dynamics

    Science.gov (United States)

    Kells, G.; Sen, D.; Slingerland, J. K.; Vishveshwara, S.

    2014-06-01

    We study the nonequilibrium dynamics of quenching through a quantum critical point in topological systems, focusing on one of their defining features: ground-state degeneracies and associated topological sectors. We present the notion of "topological blocking," experienced by the dynamics due to a mismatch in degeneracies between two phases, and we argue that the dynamic evolution of the quench depends strongly on the topological sector being probed. We demonstrate this interplay between quench and topology in models stemming from two extensively studied systems, the transverse Ising chain and the Kitaev honeycomb model. Through nonlocal maps of each of these systems, we effectively study spinless fermionic p-wave paired topological superconductors. Confining the systems to ring and toroidal geometries, respectively, enables us to cleanly address degeneracies, subtle issues of fermion occupation and parity, and mismatches between topological sectors. We show that various features of the quench, which are related to Kibble-Zurek physics, are sensitive to the topological sector being probed, in particular, the overlap between the time-evolved initial ground state and an appropriate low-energy state of the final Hamiltonian. While most of our study is confined to translationally invariant systems, where momentum is a convenient quantum number, we briefly consider the effect of disorder and illustrate how this can influence the quench in a qualitatively different way depending on the topological sector considered.

  15. Effect of quencher and temperature on fluorescence intensity of laser dyes: DETC and C504T

    Science.gov (United States)

    Jana, Basavaraja; Inamdar, S. R.; Kumar, H. M. Suresh

    2017-01-01

    Fluorescence quenching of 7- Diethylamino-3-thenoylcoumarin (DETC) and 2,3,6,7-tetrahydro-1,1,7,7-tetramethyl11-oxo-1H,5H,11H- [1]benzopyrano[6,7,8-ij]quinolizine-10-carboxylic acid, ethyl ester (C504T) by aniline(AN), dimethylaniline (DMA) and diethylaniline (DEA) was investigated in toluene by steady state and transient methods. The quenching parameters like frequency of encounter (kd), probability of quenching per encounter (p), quenching rate parameters (kq) and activation energy of quenching (Ea) were determined experimentally. The kq values determined by steady state and time-resolved methods for the both dyes were found to be same, indicating the dynamic nature of interaction. Magnitudes of p and Ea suggested that the quenching reaction is predominantly controlled by material diffusion. The quenching mechanism is rationalized in terms of electron transfer (ET) from donors (aromatic amines) to the acceptors (coumarin derivatives) confirmed by correlating kq with free energy changes (ΔG°). Further, an effect of temperature on fluorescence intensity was carried out in toluene and methanol solvents. Fluorescence intensity of both the dyes decreases with increase in temperature. Temperature quenching in case of C504T is due to intersystem crossing S1 → T2, whereas for DETC, quenching is due to intersystem crossing S1 → T2 and ICT → TICT transition.

  16. Fluorescence studies of interaction between flavonol p-coumaroylglucoside tiliroside and bovine serum albumin

    Science.gov (United States)

    Hu, Xiaoli; Cui, Shuya; Liu, Jia qin

    2010-10-01

    In this paper, the interaction between flavonol p-coumaroylglucoside tiliroside and BSA was investigated by fluorescence quenching spectra, synchronous fluorescence spectra, and three-dimensional fluorescence spectra under simulative physiological conditions. It was proved that the fluorescence quenching of BSA by tiliroside was mainly a result of the formation of a tiliroside-BSA complex. The modified Stern-Volmer quenching constant and the corresponding thermodynamic parameters Δ H, Δ G and Δ S at different temperatures were calculated. The results indicated that electrostatic interactions were the predominant intermolecular forces in stabilizing the complex. The distance r = 3.95 nm between the donor (BSA) and acceptor (tiliroside) was obtained according to Förster's nonradioactive energy transfer theory. The synchronous fluorescence and three-dimensional fluorescence spectra results showed the microenvironment and conformation of BSA were changed in the binding reaction.

  17. Thermal quench at finite 't Hooft coupling

    Directory of Open Access Journals (Sweden)

    H. Ebrahim

    2016-03-01

    Full Text Available Using holography we have studied thermal electric field quench for infinite and finite 't Hooft coupling constant. The set-up we consider here is D7-brane embedded in (α′ corrected AdS-black hole background. It is well-known that due to a time-dependent electric field on the probe brane, a time-dependent current will be produced and it will finally relax to its equilibrium value. We have studied the effect of different parameters of the system on equilibration time. As the most important results, for massless fundamental matter, we have observed a universal behaviour in the rescaled equilibration time in the very fast quench regime for different values of the temperature and α′ correction parameter. It seems that in the slow quench regime the system behaves adiabatically. We have also observed that the equilibration time decreases in finite 't Hooft coupling limit.

  18. Dynamical quenching of tunneling in molecular magnets

    Energy Technology Data Exchange (ETDEWEB)

    José Santander, María, E-mail: maria.jose.noemi@gmail.com [Recursos Educativos Quántica, Santiago (Chile); Departamento de Física, Universidad de Santiago de Chile and CEDENNA, Avda. Ecuador 3493, Santiago (Chile); Nunez, Alvaro S., E-mail: alnunez@dfi.uchile.cl [Departamento de Física, Facultad de Ciencias Físicas y Matemáticas, Universidad de Chile, Casilla 487-3, Santiago (Chile); Roldán-Molina, A. [Instituto de Física, Pontificia Universidad Católica de Valparaíso, Avenida Universidad 330, Curauma, Valparaíso (Chile); Troncoso, Roberto E., E-mail: r.troncoso.c@gmail.com [Centro para el Desarrollo de la Nanociencia y la Nanotecnología, CEDENNA, Avda. Ecuador 3493, Santiago 9170124 (Chile); Departamento de Física, Universidad Técnica Federico Santa María, Avenida España 1680, Valparaíso (Chile)

    2015-12-15

    It is shown that a single molecular magnet placed in a rapidly oscillating magnetic field displays the phenomenon of quenching of tunneling processes. The results open a way to manipulate the quantum states of molecular magnets by means of radiation in the terahertz range. Our analysis separates the time evolution into slow and fast components thereby obtaining an effective theory for the slow dynamics. This effective theory presents quenching of the tunnel effect, in particular, stands out its difference with the so-called coherent destruction of tunneling. We support our prediction with numerical evidence based on an exact solution of Schrödinger's equation. - Highlights: • Single molecular magnets under rapidly oscillating magnetic fields is studied. • It is shown that this system displays the quenching of tunneling processes. • Our findings provide a control of quantum molecular magnets via terahertz radiation.

  19. 不同干旱胁迫下欧李光合及叶绿素荧光参数的响应%Response of Photosynthesis and Chlorophy Ⅱ Fluorescence Parameters to Different Drought Stress in Cerasus humilis Bunge.

    Institute of Scientific and Technical Information of China (English)

    尹赜鹏; 刘雪梅; 商志伟; 任静; 宋兴舜

    2011-01-01

    采用人为控制土壤含水量的方法对欧李进行轻度和重度干旱的处理,测定叶片的气体交换和叶绿素荧光参数的日变化.结果表明,干旱胁迫下欧李叶片净光合速率、蒸腾速率、水分利用效率、气孔导度.PsII最大光化学效率、光化学量子效率显著下降,但胞间CO2浓度、非光化学猝灭系数以及叶黄素循脱环氧化状态(Z+0.5A)/(V+A+Z)和Z含量升高.两干旱处理植株的影响程度存在差异.这表明在长时间干旱条件下,欧李叶片光合作用的降低受到气孔与非气孔因素的双重影响,叶黄素循环的启动增加了胁迫条件下的热耗散能力以保护光合机构免受干旱胁迫的进一步伤害.%In order to study the light response mechanisms of Cerasus humilis under drought stress, leaf gas exchange and chlorophyll fluorescence parameters were measured with mild and severe drought treatment. The results showed that net photosynthesis rate (Pn), transpiration rate (E), water utilization efficiency (WUE), stomatal conductance (Gs) and maximal photochemical efficiency of PS Ⅱ (Fv/Fm) decreased significantly in seedlings of C. humilis under drought stress. While the values of intercellular CO2 concentration (Ci), non-photochemical quenching coefficient (NPQ) and the ratio of Z+0.5A and V+A+Z increased. These results indicated that the decrease of photosynthetic capacity was attributed to both stomatal limitation and non-stomatal limitation under long drought treatment. The capacity of heat dissipation was improved by initiating of the xanthophyll cycle,which resulted in the protection of the photosynthetic apparatus from the damage of drought stress.

  20. New Fluorescence Parameters for the Determination of QA Redox State and Excitation Energy Fluxes.

    Science.gov (United States)

    Kramer, David M; Johnson, Giles; Kiirats, Olavi; Edwards, Gerald E

    2004-02-01

    A number of useful photosynthetic parameters are commonly derived from saturation pulse-induced fluorescence analysis. We show, that qP, an estimate of the fraction of open centers, is based on a pure 'puddle' antenna model, where each Photosystem (PS) II center possesses its own independent antenna system. This parameter is incompatible with more realistic models of the photosynthetic unit, where reaction centers are connected by shared antenna, that is, the so-called 'lake' or 'connected units' models. We thus introduce a new parameter, qL, based on a Stern-Volmer approach using a lake model, which estimates the fraction of open PS II centers. We suggest that qL should be a useful parameter for terrestrial plants consistent with a high connectivity of PS II units, whereas some marine species with distinct antenna architecture, may require the use of more complex parameters based on intermediate models of the photosynthetic unit. Another useful parameter calculated from fluorescence analysis is ΦII, the yield of PS II. In contrast to qL, we show that the ΦII parameter can be derived from either a pure 'lake' or pure 'puddle' model, and is thus likely to be a robust parameter. The energy absorbed by PS II is divided between the fraction used in photochemistry, ΦII, and that lost non-photochemically. We introduce two additional parameters that can be used to estimate the flux of excitation energy into competing non-photochemical pathways, the yield induced by downregulatory processes, ΦNPQ, and the yield for other energy losses, ΦNO.

  1. Molecules for Fluorescence Detection of Specific Chemicals

    Science.gov (United States)

    Fedor, Steve

    2008-01-01

    A family of fluorescent dye molecules has been developed for use in on-off fluorescence detection of specific chemicals. By themselves, these molecules do not fluoresce. However, when exposed to certain chemical analytes in liquid or vapor forms, they do fluoresce (see figure). These compounds are amenable to fixation on or in a variety of substrates for use in fluorescence-based detection devices: they can be chemically modified to anchor them to porous or non-porous solid supports or can be incorporated into polymer films. Potential applications for these compounds include detection of chemical warfare agents, sensing of acidity or alkalinity, and fluorescent tagging of proteins in pharmaceutical research and development. These molecules could also be exploited for use as two-photon materials for photodynamic therapy in the treatment of certain cancers and other diseases. A molecule in this family consists of a fluorescent core (such as an anthracene or pyrene) attached to two end groups that, when the dye is excited by absorption of light, transfer an electron to the core, thereby quenching the fluorescence. The end groups can be engineered so that they react chemically with certain analytes. Upon reaction, electrons on the end groups are no longer available for transfer to the core and, consequently, the fluorescence from the core is no longer quenched. The chemoselectivity of these molecules can be changed by changing the end groups. For example, aniline end groups afford a capability for sensing acids or acid halides (including those contained in chemical warfare agents). Pyridine or bipyridyl end groups would enable sensing of metal ions. Other chemicals that can be selectively detected through suitable choice of end groups include glucose and proteins. Moreover, the fluorescent cores can be changed to alter light-absorption and -emission characteristics: anthracene cores fluoresce at wavelengths around 500 nm, whereas perylene cores absorb and emit at

  2. Quench in high temperature superconductor magnets

    CERN Document Server

    Schwartz, J

    2013-01-01

    High field superconducting magnets using high temperature superconductors are being developed for high energy physics, nuclear magnetic resonance and energy storage applications. Although the conductor technology has progressed to the point where such large magnets can be readily envisioned, quench protection remains a key challenge. It is well-established that quench propagation in HTS magnets is very slow and this brings new challenges that must be addressed. In this paper, these challenges are discussed and potential solutions, driven by new technologies such as optical fiber based sensors and thermally conducting electrical insulators, are reviewed.

  3. Quench propagation analysis in adiabatic superconducting windings

    Energy Technology Data Exchange (ETDEWEB)

    Ishiyama, A.; Matsumura, H.; Takita, W. (Dept. of Electrical Engineering, Waseda Univ., Tokyo (JP)); Iwasa, Y (Massachusetts Inst. of Tech., Cambridge, MA (United States). Francis Bitter National Magnet Lab.)

    1991-03-01

    This paper reports the basic postulate of the author's quench simulation code, developed to analyze normal-zone propagation in adiabatic magnets which is the code's computation may be immensely simplified without sacrifice in accuracy by aggregating all thermal properties of the winding affecting normal-zone propagation into a single parameter of the transverse quench velocity. In order to verify this postulate, a finite element method (FEM) analysis has been applied to solve the temporal and spatial evolution of temperature within a section of an adiabatic magnet winding.

  4. Event-Shape Engineering and Jet Quenching

    CERN Document Server

    Christiansen, Peter

    2016-01-01

    Event-Shape Engineering (ESE) is a tool that enables some control of the initial geometry in heavy-ion collisions in a similar way as the centrality enables some control of the number of participants. Utilizing ESE, the path length in and out-of plane can be varied while keeping the medium properties (centrality) fixed. In this proceeding it is argued that this provides additional experimental information about jet quenching. Finally, it is suggested that if ESE studies are done in parallel for light and heavy quarks one can determine, in a model independent way, if the path-length dependence of their quenching differs.

  5. Investigating jet quenching on the lattice

    CERN Document Server

    Panero, Marco; Schäfer, Andreas

    2014-01-01

    Due to the dynamical, real-time, nature of the phenomenon, the study of jet quenching via lattice QCD simulations is not straightforward. In this contribution, however, we show how one can extract information about the momentum broadening of a hard parton moving in the quark-gluon plasma, from lattice calculations. After discussing the basic idea (originally proposed by Caron-Huot), we present a recent study, in which we estimated the jet quenching parameter non-perturbatively, from the lattice evaluation of a particular set of gauge-invariant operators.

  6. Application of Best Estimate Approach for Modelling of QUENCH-03 and QUENCH-06 Experiments

    Directory of Open Access Journals (Sweden)

    Tadas Kaliatka

    2016-04-01

    In this article, the QUENCH-03 and QUENCH-06 experiments are modelled using ASTEC and RELAP/SCDAPSIM codes. For the uncertainty and sensitivity analysis, SUSA3.5 and SUNSET tools were used. The article demonstrates that applying the best estimate approach, it is possible to develop basic QUENCH input deck and to develop the two sets of input parameters, covering maximal and minimal ranges of uncertainties. These allow simulating different (but with the same nature tests, receiving calculation results with the evaluated range of uncertainties.

  7. Validation of Quench Simulation and Simulation of the TWIN Solenoid

    CERN Document Server

    Pots, Rosalinde Hendrika

    2015-01-01

    For the Future Circular Collider at CERN a multi-purpose detector is proposed. The 6T TWIN Solenoid, a very large magnet system with a stored energy of 53 GJ, is being designed. It is important to protect the magnet against quenches in the system. Therefore several existing quench protection systems are evaluated and simulations have be performed on quenches in the TWIN Solenoid. The simulations on quenches in the TWIN Solenoid have been performed with promising results; the hotspot temperatures do not exceed 120 K and layer to layer voltages stay below 500 V. Adding quench heaters to the system might improve the quench protection system further.

  8. Analysis of superconducting cavity quench events at SSRF

    Institute of Scientific and Technical Information of China (English)

    HOU Hong-Tao; LI Zheng; LIU Jian-Fei; ZHAO Yu-Bin; ZHAO Shen-jie; ZHANG Zhi-Gang; LUO Chen; FENG Zi-Qiang; MAO Dong-Qing; ZHENG Xiang

    2011-01-01

    Quench is important and dangerous to superconducting RF cavities. This paper illustrates the mechanism of quench and how a quench detector works, and analyzes the quench events happening during beam operations and cavity conditioning. We find that the quench protection is mostly triggered by some reasons such as fluctuation of cavity voltage, multipacting or arc, rather than a real cavity thermal breakdown. The results will be beneficial to optimize the operation parameters of superconducting cavities, to discover the real reasons for beam trip by quench interlock, and to improve the operation stability of superconducting RF systems.

  9. Quenched heavy-light decay constants

    Energy Technology Data Exchange (ETDEWEB)

    Baxter, R.M.; Booth, S.P.; Bowler, K.C.; Collins, S.; Henty, D.S.; Kenway, R.D.; Richards, D.G.; Shanahan, H.P.; Simone, J.N.; Simpson, A.D.; Wilkes, B.E. (Department of Physics, The University of Edinburgh, Edinburgh EH9 3JZ (United Kingdom)); Ewing, A.K.; Lellouch, L.; Sachrajda, C.T.; Wittig, H. (Physics Department, The University, Southampton SO9 5NH (United Kingdom)); (UKQCD Collaboration)

    1994-02-01

    We present results for heavy-light decay constants, using both propagating quarks and the static approximation, in [ital O]([ital a])-improved, quenched lattice QCD. At [beta]=6.2 on a 24[sup 3][times]48 lattice we find [ital f][sub [ital D

  10. LHC BFPP Quench Test with Ions (2015)

    CERN Document Server

    Schaumann, Michaela; Bahamonde Castro, Cristina; Auchmann, Bernhard; Chetvertkova, Vera; Giachino, Rossano; Jowett, John; Kalliokoski, Matti; Lechner, Anton; Mertens, Tom; Ponce, Laurette; CERN. Geneva. ATS Department

    2016-01-01

    The 2015 Pb-Pb collision run of the LHC operated at a beam energy of 6.37Z TeV. The power of the secondary beams emitted from the interaction point by the bound-free pair production (BFPP) process reached new levels while the propensity of the bending magnets to quench is higher at the new magnetic field levels. This beam power is about 70 times greater than that contained in the luminosity debris and is focussed on a specific location. As long foreseen, orbit bumps were introduced in the dispersion suppressors around the highest luminosity experiments to mitigate the risk of quenches by displacing and spreading out these losses. Because the impact position and intensity of these secondary beams is well known and can be tracked easily with the Beam Loss Monitors (BLMs), the BFPP1 beam (208Pb81+ ions), which is the most intense, provides a tool to accurately measure the steady state quench limit of the LHC main dipoles. At the moment the exact quench limit is not known, but this knowledge is important to asses...

  11. Lattice QCD simulations beyond the quenched approximation

    Energy Technology Data Exchange (ETDEWEB)

    Ukawa, A. (European Organization for Nuclear Research, Geneva (Switzerland). Theory Div.)

    1989-07-01

    Present status of lattice QCD simulations incorporating the effects of dynamical quarks is presented. After a brief review of the formalism of lattice QCD, the dynamical fermion algorithms in use today are described. Recent attempts at the hadron mass calculation are discussed in relation to the quenched results, and current understanding on the finite temperature behavior of QCD is summarized. (orig.).

  12. Effects of exogenous 5-aminolevulinic acid on chlorophyll fluorescence characteristics and energy dissipation of Sarcandra glabra under drought stress%外源5-氨基乙酰丙酸对干旱胁迫下草珊瑚叶绿素荧光特性及能量分配的影响

    Institute of Scientific and Technical Information of China (English)

    张春平; 何平; 袁凤刚; 喻泽莉; 杜丹丹; 韦品祥; 胡世俊

    2012-01-01

    Objective To study the effects of drought stress on chlorophyll fluorescence characteristics and energy dissipation of Sarcandra glabra and get the method of alleviating drought stress, so as to provide theoretical basis against drought in planting. Methods Several physiological indexes of S. Glabra treated by 5-aminolevulinic acid (ALA) under drought stress (PEG-6000 at the concentration of 15%) were measured, such as the contents of photosynthetic pigment, chlorophyll fluorescence parameters, and energy parameters. Results Exogenous ALA obviously increased the content of chlorophyll and carotenoids, enhanced the maximum fluorescence (Fm), photochemical efficiency of photosystem II (PSII, Fv/Fm), potential photochemical efficiency (Fv/Fo), photochemical efficiency (Fv'/Fmr), PSII actual photochemical efficiency (OPSII), photochemical quenching coefficient (qP), electronic transfer rate (ETR), and photochemistry rate (PCR), as well as significnatly decreased the level of minimum fluorescence (Fo), non-photochemical quenching (NPQ) coefficient, and heat dissipation rate (HDR). The proportion of ALA absorbed light in photochemistry (P) was increased, the fraction of antenna pigment heat dissipation (D) and excess energy (£) for NPQ was decreased. The fraction of P was the main pathway for excessive energy dissipation. ALA could promote the redistribution of energy reasonablely. Conclusion Exogenous ALA (100 mg/L) could significantly reduce the dissipation of excess excitation energy, improve the photochemical electron transport efficiency,and efficiently protect leaf blade of S. Glabra from PSII damage under drought stress. ALA could obviously promote the droughtresistance of S. Glabra plantlet.%目的 探讨干旱胁迫对草珊瑚叶绿素荧光特性及能量分配的影响,找到延缓干旱胁迫的方法,为抗旱栽培提供理论依据.方法 考察15% PEG-6000模拟干旱胁迫条件下,经过不同浓度5-氨基乙酰丙酸(ALA)和不同时间处理后

  13. Fluorescence properties of riboflavin-functionalized mesoporous silica SBA-15 and riboflavin solutions in presence of different metal and organic cations

    Science.gov (United States)

    Lewandowski, Dawid; Schroeder, Grzegorz; Sawczak, Mirosław; Ossowski, Tadeusz

    2015-10-01

    Riboflavin was covalently linked to mesoporous SBA-15 silica surface via grafting technique. Then fluorescence properties of the system obtained were analyzed in the presence of several metal and organic cations. Both quenching and strengthening of fluorescence as well as significant changes in the maximum fluorescence wavelength were observed. The results were compared with absorption and fluorescence data obtained for riboflavin water solutions.

  14. Novel Pyrene-armed Calix[4]arenes through Triazole Connec-tion: Ratiometric Fluorescent Chemosensor for Zn2+ and Promising Structure for Integrated Logic Gates

    Institute of Scientific and Technical Information of China (English)

    ZHU Lin-Na; GONG Shao-Long; GONG Shu-Ling; YANG Chu-Luo; QIN Jin-Gui

    2008-01-01

    Two novel pyrene-armed calix[4]arenes by triazole connection were synthesized using "click" chemistry. Com-pound 1 with two pyrene subunits appended to the lower rims of the calix[4]arene shows ratiometric fluorescence response toward Zn2+, and selective fluorescence quenching toward heavy metal ions such as Cu2+, Hg2+ and pb2+; while compound 2 with one pyrene subunit exhibits significant fluorescence quenching toward Cu2+ and moderate quenching behaviour toward Hg2+. By utilizing the different fluorescence behavior of 1 toward Zn2+and Cu2+, inhi-bition (INH) and not or (NOR) logic gates were established.

  15. Simulation of the Quench-06 experiment with Scdapsim; Simulacion del experimento Quench-06 con Scdapsim

    Energy Technology Data Exchange (ETDEWEB)

    Angel M, E. del; Nunez C, A.; Amador G, R. [CNSNS, Dr. Barragan No. 779, 03020 Mexico D.F. (Mexico)]. e-mail: edangelm@cnsns.gob.mx

    2003-07-01

    The present work describes the pattern of the called Quench installation developed and used by the National Commission of Nuclear Security and Safeguards (CNSNS) for their participation in the International Standard Problem 45 (ISP), organized by the Nuclear Energy Agency (NEA). The exercise consisted on the simulation of the denominated experiment Quench-06 carried out in the experimental installation Quench located in the Forschungszentrum laboratory in Karlsruhe, Germany. The experiment Quench-06 consisted on simulating the sudden and late injection of water in a fuel assemble for a pressurized reactor (PWR). The CNSNS uses the version bd of the SCDAPSIM code developed by the company Innovative Software Systems (ISS) to simulate this experiment. The obtained results showed that the code is able to predict the experiment partially when overestimating the hydrogen production and of the partial fused of some fuel pellets, but predicting correctly the damage in the shroud. (Author)

  16. Ultrasensitive biosensing platform based on the luminescence quenching ability of plasmonic palladium nanoparticles.

    Science.gov (United States)

    Li, Hui; Sun, De-En; Liu, Zhihong

    2015-03-23

    An ultrasensitive biosensing platform for DNA and protein detection is constructed based on the luminescence quenching ability of plasmonic palladium nanoparticles (PdNPs). By growing the particles into large sizes (ca. 30 nm), the plasmonic light absorption of PdNPs is broadened and extended to the visible range with extinction coefficients as high as 10(9)  L mol(-1)  cm(-1) , enabling complete quenching of fluorescent dyes that emit at diverse ranges and that are tagged to bioprobes. Meanwhile the nonspecific quenching of the dyes (not bound to probes) is negligible, leading to extremely low background signal. Utilizing the affinity of PdNPs towards bioprobes, such as single-stranded (ss) DNA and polypeptide molecules, which is mainly assigned to the coordination interaction, nucleic acid assays with a quantification limit of 3 pM target DNA and protein assay are achieved with a simple mix-and-detect strategy based on the luminescence quenching-and-recovery protocol. This is the first demonstration of biosensing employing plasmonic absorption of nanopalladium, which offers pronounced sensing performances and can be reasonably expected for wide applications.

  17. Simulation of bundle test Quench-12 with integral code MELCOR

    Energy Technology Data Exchange (ETDEWEB)

    Duspiva, J. [Nuclear Research Inst., Rez plc (Czech Republic)

    2011-07-01

    The past NRI analyses cover the Quench-01, Quench-03 and Quench-06 with version MELCOR 1.8.5 (including reflood model), and Quench-01 and Quench-11 tests with the latest version MELCOR 1.8.6. The Quench-12 test is specific, because it has different bundle configuration related to the VVER bundle configuration with hexagonal grid of pins and also used E110 cladding material. Specificity of Quench-12 test is also in the used material of fuel rod cladding - E110. The test specificities are a reason for the highest concern, because the VVER reactors are operated in the Czech Republic. The new input model was developed with the taking into account all experience from previous simulations of the Quench bundle tests. The recent version MELCOR 1.8.6 YU{sub 2}911 was used for the simulation with slightly modified ELHEAT package. Sensitivity studies on input parameters and oxidation kinetics were performed. (author)

  18. Synergy between graphene and Au nanoparticles (heterojunction) towards quenching, improving Raman signal, and UV light sensing.

    Science.gov (United States)

    Dalfovo, María C; Lacconi, Gabriela I; Moreno, Mónica; Yappert, Marta C; Sumanasekera, Gamini U; Salvarezza, Roberto C; Ibañez, Francisco J

    2014-05-14

    Here, we developed a simple method for obtaining a heterojunction composed of graphene (G) and surfactant-coated Au nanoparticles (NPs) to measure film conductivity and surface enhanced Raman scattering (SERS). Monolayer G is obtained by chemical vapor deposition (CVD) and transferred via poly(methyl methacrylate) (PMMA) to microfabricated Au electrodes, glass, and silicon. Post-synthesis treatments of G with PMMA and ozone (O3) showed 1 and 6 orders of magnitude decrease in film conductivity, respectively. The heterojunction formation with Au NPs had no major effect on G conductivity. In this work is demonstrated that G quenches more than 90% of the combined photoluminescence and fluorescence of Au NPs and Rhodamine B (RhB), respectively. Signal quenching permitted quantitative analysis of SERS of RhB on various substrates including as-transferred graphene, oxidized graphene (OG), and the heterojunction. While G is mainly responsible for quenching photoluminescence and fluorescence, ∼3 orders of magnitude increase SERS activity for RhB was accomplished by the heterojunction. Finally, we wanted to correlate changes in film current during UV light sensing experiments. We found striking differences in the sensing profiles at different UV energies.

  19. Single photon detection with self-quenching multiplication

    Science.gov (United States)

    Zheng, Xinyu (Inventor); Cunningham, Thomas J. (Inventor); Pain, Bedabrata (Inventor)

    2011-01-01

    A photoelectronic device and an avalanche self-quenching process for a photoelectronic device are described. The photoelectronic device comprises a nanoscale semiconductor multiplication region and a nanoscale doped semiconductor quenching structure including a depletion region and an undepletion region. The photoelectronic device can act as a single photon detector or a single carrier multiplier. The avalanche self-quenching process allows electrical field reduction in the multiplication region by movement of the multiplication carriers, thus quenching the avalanche.

  20. Species-specific and seasonal differences in chlorophyll fluorescence and photosynthetic light response among three evergreen species in a Madrean sky island mixed conifer forest

    Science.gov (United States)

    Potts, D. L.; Minor, R. L.; Braun, Z.; Barron-Gafford, G. A.

    2012-12-01

    Unlike the snowmelt-dominated hydroclimate of more northern mountainous regions, the hydroclimate of the Madrean sky islands is characterized by snowmelt and convective storms associated with the North American Monsoon. These mid-summer storms trigger biological activity and are important drivers of primary productivity. For example, at the highest elevations where mixed conifer forests occur, ecosystem carbon balance is influenced by monsoon rains. Whereas these storms' significance is increasingly recognized at the ecosystem scale, species-specific physiological responses to the monsoon are poorly known. Prior to and following monsoon onset, we measured pre-dawn and light-adapted chlorophyll fluorescence as well as photosynthetic light response in southwestern white pine (Pinus strobiformis), ponderosa pine (Pinus ponderosa), and Douglas fir (Pseudotsuga menziesii) in a Madrean sky island mixed conifer forest near Tucson, Arizona. Photochemical quenching (qp), an indicator of the proportion of open PSII reaction centers, was greatest in P. strobiformis and least in P. menziesii and increased in response to monsoon rains (repeated-measures ANOVA; species, F2,14 = 6.17, P = 0.012; time, F2,14= 8.17, P = 0.013). In contrast, non-photochemical quenching (qN), an indicator of heat dissipation ability, was greatest in P. ponderosa and least in P. menziesii, but was not influenced by monsoon onset (repeated-measures ANOVA; species, F2,12 = 4.18, P = 0.042). Estimated from leaf area-adjusted photosynthetic light response curves, maximum photosynthetic rate (Amax) was greatest in P. ponderosa and least in P. menziesii (repeated-measures ANOVA; species, F2,8= 40.8, P = 0.001). Surprisingly, while the monsoon positively influenced Amax among P. ponderosa and P. strobiformis, Amax of P. menziesii declined with monsoon onset (repeated-measures ANOVA; species x time, F2,8 = 13.8, P = 0.002). Calculated as the initial slope of the photosynthetic light response curve, light

  1. Photophysical, Photochemical, and BQ Quenching Properties of Zinc Phthalocyanines with Fused or Interrupted Extended Conjugation

    Directory of Open Access Journals (Sweden)

    Gülşah Gümrükçü

    2014-01-01

    Full Text Available The effects of substituents and solvents on the photophysical and photochemical parameters of zinc(II phthalocyanines containing four Schiff’s base substituents attached directly and through phenyleneoxy-bridges on peripheral positions are reported. The group effects on peripheral position and the continual and intermittent conjugation of the phthalocyanine molecules on the photophysical and photochemical properties are also investigated. General trends are described for photodegradation, singlet oxygen, and fluorescence quantum yields of these compounds in dimethylsulfoxide (DMSO, dimethylformamide (DMF, and tetrahydrofurane (THF. Among the different substituents, phthalocyanines with cinnamaldimine moieties (1c and 2c have the highest singlet oxygen quantum yields (ΦΔ and those with nitro groups (1a and 2a have the highest fluorescence quantum yields in all the solvents used. The fluorescence of the substituted zinc(II phthalocyanine complexes is effectively quenched by 1,4-benzoquinone (BQ in these solvents.

  2. Study on binding and fluorescence energy transfer efficiency of Rhodamine B with Pluronic F127-gold nanohybrid using optical spectroscopy methods

    Science.gov (United States)

    Antonisamy, Jenif Dsouza; Swain, Jitendriya; Dash, Sasmita

    2017-02-01

    This work focuses on the binding efficiency and fluorescence resonance energy transfer (FRET) of fluorescent dye Rhodamine B (Rh B) to Pluronic F127-gold nanohybrid. The formation of gold nanoparticles inside Rh B doped Pluronic F127 copolymer have been characterized using dynamic light scattering study, HR-TEM images, UV-visible spectra and fluorescence studies. Fluorescence quenching and the constant fluorescence lifetime of the Rhodamine B present in the cavity of Pluronic F127-gold nanohybrid suggested a strong binding ability (3.5 × 103 L mol- 1), static nature of quenching and better energy transfer efficiency of fluorescent dye towards Pluronic F127-gold (Au) nanohybrids.

  3. 40 CFR 1065.675 - CLD quench verification calculations.

    Science.gov (United States)

    2010-07-01

    ... verification calculations. Perform CLD quench-check calculations as follows: (a) Perform a CLD analyzer quench... water content in combustion air, fuel combustion products, and dilution air (if applicable). If you... the maximum expected CO2 content in fuel combustion products and dilution air. (d) Calculate quench...

  4. Static and dynamic quenching of luminescent species in polymer media.

    Science.gov (United States)

    Hartmann, P; Leiner, M J; Lippitsch, M E

    1994-12-01

    A method developed for quantitative determination of static and dynamic contributions to luminescence quenching is applied to Ru(II) complexes in polymer matrices (silica gel and polystyrene), quenched by oxygen. This method is based on both intensity and lifetime quenching experiments. The curvature of intensity Stern-Volmer plots is related to the results.

  5. First experience with the new coupling loss induced quench system

    NARCIS (Netherlands)

    Ravaioli, E.; Datskov, V.I.; Dudarev, A.V.; Kirby, G.; Sperin, K.A.; Kate, ten H.H.J.; Verweij, A.P.

    2014-01-01

    New-generation high-field superconducting magnets pose a challenge relating to the protection of the coil winding pack in the case of a quench. The high stored energy per unit volume calls for a very efficient quench detection and fast quench propagation in order to avoid damage due to overheating. A

  6. Fluorescence Spectroscopic Studies on Ovis Lactoperoxidase

    Directory of Open Access Journals (Sweden)

    P. V. Joseph

    2004-01-01

    Full Text Available Ovis lactoperoxidase (sLP, on excitation at 280 nm shows fluorescence emission of a single broad maximum at 332 nm. The conformational stability was measured by unfolding studies in urea and guanidine hydrochloride. The fluorescence intensity gradually decreased with increase in urea concentrations. The decline might have been caused by partial unfolding, affecting some of the tryptophan residues. In 5 M GuHCl concentrations, a red shift in emission maximum to 356 nm was observed. It indicates that tryptophan is buried in the interior of the hydrophobic environment in native folded state and inaccessible to solvent water but on unfolding all get exposed to aqueous environment. Acrylamide is an efficient quencher and the quenching process is essentially homogenous with all tryptophan being accessible. A little quenching is observed for KI is interpreted as sLP has tryptophan residues that are buried inside the core of the protein.

  7. Determination of ranitidine, nizatidine, and cimetidine by a sensitive fluorescent probe.

    Science.gov (United States)

    Chang, Yin-Xia; Qiu, Yue-Qin; Du, Li-Ming; Li, Chang-Feng; Guo, Min

    2011-10-21

    A validated, simple, and sensitive fluorescence quenching method for the determination of ranitidine, nizatidine, and cimetidine in tablets and biological fluids is presented. This is the first single fluorescence method reported for the analysis of all three H(2) antagonists. The competitive reaction between the investigated drug and the palmatine probe for the occupancy of the cucurbit[7]uril (CB[7]) cavity was studied using spectrofluorometry. CB[7] was found to react with the probe to form a stable complex. The fluorescence intensity of the complex was also enhanced greatly. However, the addition of the drug dramatically quenched the fluorescence intensity of the complex. Accordingly, a new fluorescence quenching method for the determination of the studied drugs was established. The different experimental parameters affecting the fluorescence quenching intensity were studied carefully. At optimum reaction conditions, the rectilinear calibration graphs between the fluorescence quenching values (ΔF) and the medicament concentration were obtained in the concentration range of 0.04-1.9 μg mL(-1) for the investigated drugs. The limits of detection ranged from 0.013 to 0.030 μg mL(-1) at 495 nm using an excitation wavelength of 343 nm. The proposed method can be used for the determination of the three H(2) antagonists in raw materials, dosage forms and biological fluids.

  8. Collapse and Revival in Holographic Quenches

    CERN Document Server

    da Silva, Emilia; Mas, Javier; Serantes, Alexandre

    2014-01-01

    We study holographic models related to global quantum quenches in finite size systems. The holographic set up describes naturally a CFT, which we consider on a circle and a sphere. The enhanced symmetry of the conformal group on the circle motivates us to compare the evolution in both cases. Depending on the initial conditions, the dual geometry exhibits oscillations that we holographically interpret as revivals of the initial field theory state. On the sphere, this only happens when the energy density created by the quench is small compared to the system size. However on the circle considerably larger energy densities are compatible with revivals. Two different timescales emerge in this latter case. A collapse time, when the system appears to have dephased, and the revival time, when after rephasing the initial state is partially recovered. The ratio of these two times depends upon the initial conditions in a similar way to what is observed in some experimental setups exhibiting collapse and revivals.

  9. Quench from Mott Insulator to Superfluid

    Energy Technology Data Exchange (ETDEWEB)

    Zurek, Wojciech H. [Los Alamos National Laboratory; Dziarmaga, Jacek [Instytut Fizyki Uniwersytetu Jagiello´nskiego; Tylutki, Marek [Instytut Fizyki Uniwersytetu Jagiello´nskiego

    2012-06-01

    We study a linear ramp of the nearest-neighbor tunneling rate in the Bose-Hubbard model driving the system from the Mott insulator state into the superfluid phase. We employ the truncated Wigner approximation to simulate linear quenches of a uniform system in 1...3 dimensions, and in a harmonic trap in 3 dimensions. In all these setups the excitation energy decays like one over third root of the quench time. The -1/3 scaling is explained by an impulse-adiabatic approximation - a variant of the Kibble-Zurek mechanism - describing a crossover from non-adiabatic to adiabatic evolution when the system begins to keep pace with the increasing tunneling rate.

  10. Energy upgrade as regards quench performance

    Energy Technology Data Exchange (ETDEWEB)

    MacKay, W.W.; Tepikian, S.

    2011-01-01

    Since the cross section for W production increases rapidly with energy, we consider the possibility of increasing the collision energy of polarized protons at RHIC. The limits of present hardware are examined with a particular emphasis on the quench training performance of magnets. Ignoring the limits of the DX magnets, the short-sample currents for the main arc (8 cm) dipoles could allow an increase of more than 30%, however we estimate 400 to 500 training quenches for the just 8 cm dipoles to reach this level. We propose that a 10% increase in energy might be achieved with the present hardware configuration. Raising the beam energy to 275 GeV ({radical}s = 550 GeV) should increase the W production rate by almost 50% from the 250 GeV level for the same optics with identical {beta}*'s at the collision points.

  11. Quench dynamics in silver coated YBCO tapes

    Science.gov (United States)

    Duckworth, R. C.; Pfotenhauer, J. M.; Lue, J. W.; Gouge, M. J.; Lee, D. F.; Kroeger, D. M.

    2002-05-01

    The role of silver in the quench dynamics of RABiTS-processed YBCO tapes was examined. The voltage distribution along the 20 cm long YBCO tapes with silver thickness between two and eight micrometers was measured when different transport current pulses were applied. Measurements on each sample were performed in a conduction-cooling environment at approximately 50 K. After normal regions were induced in the sample by short over-current pulses, an operating current was applied to monitor the sample recovery or quench. When scaled to the lowest critical current, a thermal runaway current was identified and found to increase with increasing silver thickness. A simple one-dimensional model of the system supported this trend. [This paper is also published in Advances in Cryogenic Engineering Volume 47A, AIP Conference Proceedings Volume 613, pp. 449-456.

  12. Quench dynamics of the anisotropic Heisenberg model.

    Science.gov (United States)

    Liu, Wenshuo; Andrei, Natan

    2014-06-27

    We develop an analytical approach for the study of the quench dynamics of the anisotropic Heisenberg model (XXZ model) on the infinite line. We present the exact time-dependent wave functions after a quench in an integral form for any initial state and for any anisotropy Δ by means of a generalized Yudson contour representation. We calculate the evolution of several observables from two particular initial states: starting from a local Néel state we calculate the time evolution of the antiferromagnetic order parameter-staggered magnetization; starting from a state with consecutive flipped spins (1) we calculate the evolution of the local magnetization and express it in terms of the propagation of magnons and bound state excitations, and (2) we predict the evolution of the induced spin currents. These predictions can be confronted with experiments in ultracold gases in optical lattices. We also show how the "string" solutions of Bethe ansatz equations emerge naturally from the contour approach.

  13. Collapse and revival in holographic quenches

    Science.gov (United States)

    da Silva, Emilia; Lopez, Esperanza; Mas, Javier; Serantes, Alexandre

    2015-04-01

    We study holographic models related to global quantum quenches in finite size systems. The holographic set up describes naturally a CFT, which we consider on a circle and a sphere. The enhanced symmetry of the conformal group on the circle motivates us to compare the evolution in both cases. Depending on the initial conditions, the dual geometry exhibits oscillations that we holographically interpret as revivals of the initial field theory state. On the sphere, this only happens when the energy density created by the quench is small compared to the system size. However on the circle considerably larger energy densities are compatible with revivals. Two different timescales emerge in this latter case. A collapse time, when the system appears to have dephased, and the revival time, when after rephasing the initial state is partially recovered. The ratio of these two times depends upon the initial conditions in a similar way to what is observed in some experimental setups exhibiting collapse and revivals.

  14. I/asterisk/ /6s 4P/ collisional quenching - Application to the IF 491-nm laser

    Science.gov (United States)

    Hutchison, S. B.; Verdeyen, J. T.; Eden, J. G.

    1981-01-01

    Measurements of the rate constants for quenching of the excited I (6s 4P) states by Ar, Xe, CF39I, UF6, and NF3 are described. Each rate constant is determined by recording the exponential time decay of the excited IF or excited I2 (342 nm) fluorescence in the afterglow of the e-beam-excited plasmas containing Ar, CF3I, NF3, and the desired quenching gas. In addition, further experimental evidence in support of neutral channel formation of excited IF in e-beam-pumped Ar/CF3I/NF3 mixtures is presented. Details of the experimental apparatus and gas handling procedures are given, and the kinetics model developed to interpret the experimental data is described.

  15. Quenching of the Deuteron in Flight

    CERN Document Server

    Dillig, M

    2006-01-01

    We investigate the Lorentz contraction of a deuteron in flight. Our starting point is the Blankenbecler-Sugar projection of the Bethe-Salpeter equation to a 3-dimensional quasi potential equation, wqhich we apply for the deuteron bound in an harmonic oscillator potential (for an analytical result) and by the Bonn NN potential for a more realistic estimate. We find substantial quenching with increasing external momenta and a significant modification of the high momentum spectrum of the deuteron.

  16. [Effect of quantum dots CdSe/ZnS's concentration on its fluorescence].

    Science.gov (United States)

    Jin, Min; Huang, Yu-hua; Luo, Ji-xiang

    2015-02-01

    The authors measured the absorption and the fluorescence spectra of the quantum dots CdSe/ZnS with 4 nm in size at different concentration with the use of the UV-Vis absorption spectroscopy and fluorescence spectrometer. The effect of quantum dots CdSe/ZnS's concentration on its fluorescence was especially studied and its physical mechanism was analyzed. It was observed that the optimal concentration of the quantum dots CdSe/ZnS for fluorescence is 2 micromole x L(-1). When the quantum dot's concentration is over 2 micromol x L(-1), the fluorescence is decreased with the increase in the concentration. While the quantum dot's concentration is less than 2 micromol x L(-1), the fluorescence is decreased with the decrease in the concentration. There are two main reasons: (1) fluorescence quenching and 2) the competition between absorption and fluorescence. When the quantum dot's concentration is over 2 micromol x L(-1), the distance between quantum dots is so close that the fluorescence quenching is induced. The closer the distance between quantum dots is, the more serious the fluorescence quenching is induced. Also, in this case, the absorption is so large that some of the quantum dots can not be excited because the incident light can not pass through the whole sample. As a result, the fluorescence is decreased with the increase in the quantum dot's concentration. As the quantum dot's concentration is below 2 micromol x L(-1), the distance between quantum dots is far enough that no more fluorescence quenching is induced. In this case, the fluorescence is determined by the particle number per unit volume. More particle number per unit volume produces more fluorescence. Therefore, the fluorescence is decreased with the decrease in the quantum dot's concentration.

  17. Sunscreen remanence on the skin: a noninvasive real time in vivo spectral analysis assessing the quenching of specular ultraviolet A light reflectance.

    Science.gov (United States)

    Piérard, Gérald E; Khazaka, Diana; Khazaka, Gabriel

    2016-03-01

    Under specific light illumination, particularly ultraviolet radiation (UVR), the skin produces both specular light reflectance and, possibly, specific fluorescent emission. A quenching effect of fluorescence is observed following the application of sunscreens active against UVA radiations. To assess noninvasively in a real-time process, the potential sunscreen remanence/substantivity after application on the skin. The Visiopor® device was used in a real-time procedure after application of sunscreens to the skin. A quenching effect of follicular fluorescence due to bacterial porphyrins was evaluated at 30-min intervals. The Visioscan(®) device was used as a distinct UVA emitter in a control procedure of spectral analysis of specular UVR emission and reflectance by dermal fibers. Under UVA-1 irradiations, facial skin produced different patterns of specular UVR reflectance and fluorescent emission as well. The porphyrin-related follicular fluorescence was instantly abated by UVA blockers present in suncare products. The potential sunscreen remanence/substantivity was assessed by the follicular and interfollicular fluorescence recurrence all along the next hours. All UVA blocker-containing suncare products exhibited a similar overall quenching effect on porphyrin-enriched facial hair follicles and dermal fibers. This effect lasted for a few hours. Differences in the fluorescence recovery were likely related to the amount in suncare application and the nature of the formulation components. © 2015 Wiley Periodicals, Inc.

  18. Successful magnet quench test for CAST.

    CERN Multimedia

    Brice Maximilien

    2002-01-01

    The CERN Axion Solar Telescope (CAST) consists of a prototype LHC dipole magnet with photon detectors at each end. It searches for very weakly interacting neutral particles called axions, which should originate in the core of the Sun. The telescope, located at Point 8, can move vertically within its wheeled platform, which travels horizontally along tracks in the floor. In this way, the telescope can view the Sun at sunrise through one end and at sunset through the other end. It has been cooled down to below 1.8 K and reached ~95% of its final magnetic field of 9 tesla before a quench was induced to test the whole cryogenic system under such conditions. The cryogenic system responded as expected to the magnet quench and CAST is now ready to start its three-year search for solar axions. Photos 01 & 02 : Members of the LHC cryogenics team pose in front of the axion telescope on the day of the first quench test, together with some of the CAST collaboration.

  19. The Mass Dependence of Dwarf Satellite Galaxy Quenching

    Science.gov (United States)

    Slater, Colin T.; Bell, Eric F.

    2014-09-01

    We combine observations of the Local Group with data from the NASA-Sloan Atlas to show the variation in the quenched fraction of satellite galaxies from low-mass dwarf spheroidals and dwarf irregulars to more massive dwarfs similar to the Magellanic Clouds. While almost all of the low-mass (M sstarf 5 Gyr ago. We also characterize how the susceptibility of dwarfs to ram pressure must vary as a function of mass if it is to account for the change in quenched fractions. Though neither model predicts the quenching effectiveness a priori, this modeling illustrates the physical requirements that the observed quenched fractions place on possible quenching mechanisms.

  20. Graphene as a Reversible and Spectrally Selective Fluorescence Quencher

    Science.gov (United States)

    Salihoglu, Omer; Kakenov, Nurbek; Balci, Osman; Balci, Sinan; Kocabas, Coskun

    2016-09-01

    We report reversible and spectrally selective fluorescence quenching of quantum dots (QDs) placed in close proximity to graphene. Controlling interband electronic transitions of graphene via electrostatic gating greatly modifies the fluorescence lifetime and intensity of nearby QDs via blocking of the nonradiative energy transfer between QDs and graphene. Using ionic liquid (IL) based electrolyte gating, we are able to control Fermi energy of graphene in the order of 1 eV, which yields electrically controllable fluorescence quenching of QDs in the visible spectrum. Indeed, our technique enables us to perform voltage controllable spectral selectivity among quantum dots at different emission wavelengths. We anticipate that our technique will provide tunable light-matter interaction and energy transfer that could yield hybrid QDs-graphene based optoelectronic devices with novel functionalities, and additionally, may be useful as a spectroscopic ruler, for example, in bioimaging and biomolecular sensing. We propose that graphene can be used as an electrically tunable and wavelength selective fluorescence quencher.

  1. Metal-enhanced fluorescence of carbon nanotubes.

    Science.gov (United States)

    Hong, Guosong; Tabakman, Scott M; Welsher, Kevin; Wang, Hailiang; Wang, Xinran; Dai, Hongjie

    2010-11-17

    The photoluminescence (PL) quantum yield of single-walled carbon nanotubes (SWNTs) is relatively low, with various quenching effects by metallic species reported in the literature. Here, we report the first case of metal enhanced fluorescence (MEF) of surfactant-coated carbon nanotubes on nanostructured gold substrates. The photoluminescence quantum yield of SWNTs is observed to be enhanced more than 10-fold. The dependence of fluorescence enhancement on metal-nanotube distance and on the surface plasmon resonance (SPR) of the gold substrate for various SWNT chiralities is measured to reveal the mechanism of enhancement. Surfactant-coated SWNTs in direct contact with metal exhibit strong MEF without quenching, suggesting a small quenching distance for SWNTs on the order of the van der Waals distance, beyond which the intrinsically fast nonradiative decay rate in nanotubes is little enhanced by metal. The metal enhanced fluorescence of SWNTs is attributed to radiative lifetime shortening through resonance coupling of SWNT emission to the reradiating dipolar plasmonic modes in the metal.

  2. Application of best estimate approach for modelling of QUENCH-03 and QUENCH-06 experiments

    Energy Technology Data Exchange (ETDEWEB)

    Kaliatka, Tadas; Kaliatka, Algirdas; Vileiniskis, Virginijus [Laboratory of Nuclear Installation Safety, Lithuanian Energy Institute, Breslaujos (Lithuania)

    2016-04-15

    One of the important severe accident management measures in the Light Water Reactors is water injection to the reactor core. The related phenomena are investigated by performing experiments and computer simulations. One of the most widely known is the QUENCH test-program. A number of analyses on QUENCH tests have also been performed by different computer codes for code validation and improvements. Unfortunately, any deterministic computer simulation is not free from the uncertainties. To receive the realistic calculation results, the best estimate computer codes should be used for the calculation with combination of uncertainty and sensitivity analysis of calculation results. In this article, the QUENCH-03 and QUENCH-06 experiments are modelled using ASTEC and RELAP/SCDAPSIM codes. For the uncertainty and sensitivity analysis, SUSA3.5 and SUNSET tools were used. The article demonstrates that applying the best estimate approach, it is possible to develop basic QUENCH input deck and to develop the two sets of input parameters, covering maximal and minimal ranges of uncertainties. These allow simulating different (but with the same nature) tests, receiving calculation results with the evaluated range of uncertainties.

  3. Quench propagation and protection analysis of the ATLAS Toroids

    CERN Document Server

    Dudarev, A; ten Kate, H H J; Baynham, D Elwyn; Courthold, M J D; Lesmond, C

    2000-01-01

    The ATLAS superconducting magnet system consists of the Barrel Toroid, two End Cap Toroids and the Central Solenoid. However, the Toroids of eight coils each are magnetically separate systems to the Central Solenoid. The Toroids are electrically connected in series and energized by a single power supply. The quench protection system is based on the use of relatively small external dump resistances in combination with quench-heaters activated after a quench event detection to initiate the internal dump of stored energy in all the coils. A rather strong quench-back effect due to eddy-currents in the coil casings at the transport current decay is beneficial for the quench protection efficiency in the event of heater failures. The quench behaviour of the ATLAS Toroids was computer simulated for normal operation of the quench protection system and its complete non-operation (failure) mode. (3 refs).

  4. Titanium Dioxide Nanoparticles (TiO₂) Quenching Based Aptasensing Platform: Application to Ochratoxin A Detection.

    Science.gov (United States)

    Sharma, Atul; Hayat, Akhtar; Mishra, Rupesh K; Catanante, Gaëlle; Bhand, Sunil; Marty, Jean Louis

    2015-09-22

    We demonstrate for the first time, the development of titanium dioxide nanoparticles (TiO₂) quenching based aptasensing platform for detection of target molecules. TiO₂ quench the fluorescence of FAM-labeled aptamer (fluorescein labeled aptamer) upon the non-covalent adsorption of fluorescent labeled aptamer on TiO₂ surface. When OTA interacts with the aptamer, it induced aptamer G-quadruplex complex formation, weakens the interaction between FAM-labeled aptamer and TiO₂, resulting in fluorescence recovery. As a proof of concept, an assay was employed for detection of Ochratoxin A (OTA). At optimized experimental condition, the obtained limit of detection (LOD) was 1.5 nM with a good linearity in the range 1.5 nM to 1.0 µM for OTA. The obtained results showed the high selectivity of assay towards OTA without interference to structurally similar analogue Ochratoxin B (OTB). The developed aptamer assay was evaluated for detection of OTA in beer sample and recoveries were recorded in the range from 94.30%-99.20%. Analytical figures of the merits of the developed aptasensing platform confirmed its applicability to real samples analysis. However, this is a generic aptasensing platform and can be extended for detection of other toxins or target analyte.

  5. Minimum Quench Energy and Early Quench Development in NbTi Superconducting Strands

    CERN Document Server

    Breschi, M; Boselli, M; Bottura, Luca; Devred, Arnaud; Ribani, P L; Trillaud, F

    2007-01-01

    The stability of superconducting wires is a crucial task in the design of safe and reliable superconducting magnets. These magnets are prone to premature quenches due to local releases of energy. In order to simulate these energy disturbances, various heater technologies have been developed, such as coated tips, graphite pastes, and inductive coils. The experiments studied in the present work have been performed using a single-mode diode laser with an optical fiber to illuminate the superconducting strand surface. Minimum quench energies and voltage traces at different magnetic flux densities and transport currents have been measured on an LHC-type, Cu/NbTi wire bathed in pool boiling helium I. This paper deals with the numerical analysis of the experimental data. In particular, a coupled electromagnetic and thermal model has been developed to study quench development and propagation, focusing on the influence of heat exchange with liquid helium.

  6. Structure and Fluorescence Quenching of Li2O-MgO-Al2O3-SiO2 Glasses Doped with Trivalent Cerium%Ce3+掺杂Li2O-MgO-Al2O3-SiO2玻璃的结构与荧光猝灭现象

    Institute of Scientific and Technical Information of China (English)

    陈艳平; 罗德礼; 徐钦英; 杨锁龙; 唐涛; 王小英

    2014-01-01

    20Li2O-5MgO-20Al2O3-55SiO2glass doped with different concentrations ofCe3+ions was synthesized by using melt-quenching method. The glass density as a function of Ce3+ ions doping concentration was tested by Ar-chimedes’ method. The structural characteristics of Ce3+-doped 20Li2O-5MgO-20Al2O3-55SiO2were detected by using X-rays diffraction (XRD), high resolution transmission electron microscope (HRTEM) techniques. The photolumines-cence excitation (PLE) and emission (PL) spectra were recorded in a spectrofluorimeter by photon counting techniques. Results showed that 5d energy level of Ce3+ ion was splitted to five components under the strong crystal filed sur-rounding Ce3+ ions. The higher the doping concentration of Ce3+ ions, the higher the degree of non-crystalline con-figuration of lithium magnesium aluminosilicate glass was. With the increase of the degree of non-crystalline configu-ration, the splitting width of 5d energy level increased, resulting in the redshift of excitation and emission spectra ap-parently. The PL emission intensity first increased, and then decreased with the increase of Ce3+ ions doping concen-tration. The concentration quenching processes were found to be the key reason for the reduction of the PL emission efficiency.%采用熔融淬冷法制备了不同浓度 Ce3+离子掺杂的20Li2O-5MgO-20Al2O3-55SiO2玻璃闪烁材料。采用 X 射线衍射(XRD)、高分辨透射电镜(HRTEM)技术、密度检测等方法研究了玻璃的微观结构随 Ce3+离子掺杂浓度的变化规律,采用荧光分光技术检测了玻璃的紫外光致激发光谱(PLE)、发射光谱(PE)。研究结果表明:在不对称的晶体场作用下, Ce3+离子5d能级被劈裂为5个组分;随着玻璃基质内Ce3+离子掺杂浓度增大,玻璃的非晶化程度加深;5d能级的劈裂宽度随之增大,由此导致激发带向低能量端展宽、发射光谱明显红移; Ce3+离子的荧光发射强度随Ce3+离子掺杂浓度先升高、

  7. Preparation and performance of fluorescent sensing coating for monitoring corrosion of Al alloy 2024

    Institute of Scientific and Technical Information of China (English)

    LI Song-mei; ZHANG Hong-rui; LIU Jian-hua

    2006-01-01

    A kind of fluorescent sensing coating was prepared for monitoring corrosion of aluminum alloys by incorporating phenylfluorone(PF) into acrylic paint as sensing material. The fluorescent dye PF reacts with aluminum ions on corroded aluminum substrate to occur fluorescence quenching observed in UV light. This paint system is sensitive to underlying corrosion processes through reacting with the Al3+ produced by anodic reaction accompanying corrosion. After a certain time,when the samples of Al alloy 2024 coated with PF-acrylic paint were immersed in 1 mol/L NaCl solution,fluorescence quenching spots can be seen with unaided eyes. With the development of corrosion process,the size of fluorescence quenching spots increases. Active corrosion areas on the sample surface were found under the fluorescence quenching spots by optical microscope. The corrosion areas can be observed more clearly by SEM,and many pits are found. This suggests that the fluorescence quenching spots are the sites of produced Al3+ by the anodic reaction of the local attack of the coated Al alloy substrate in the chloride solution and the corrosion process of the coated Al alloy can be monitored on-line by the sensing coating. The sensitivity of this coating system for detection of anodic reaction associated with corrosion was determined by applying constant charge current and measuring the charge,at which fluorescence quenching is detected in the coating with unaided eyes. Visual observation of coated samples can detect fluorescence change resulting from a charge corresponding to an equivalent hemispherical pit with approximate depth of 50 μm.

  8. Development of Functional Fluorescent Molecular Probes for the Detection of Biological Substances

    Directory of Open Access Journals (Sweden)

    Yoshio Suzuki

    2015-06-01

    Full Text Available This review is confined to sensors that use fluorescence to transmit biochemical information. Fluorescence is, by far, the most frequently exploited phenomenon for chemical sensors and biosensors. Parameters that define the application of such sensors include intensity, decay time, anisotropy, quenching efficiency, and luminescence energy transfer. To achieve selective (biomolecular recognition based on these fluorescence phenomena, various fluorescent elements such as small organic molecules, enzymes, antibodies, and oligonucleotides have been designed and synthesized over the past decades. This review describes the immense variety of fluorescent probes that have been designed for the recognitions of ions, small and large molecules, and their biological applications in terms of intracellular fluorescent imaging techniques.

  9. O2(a1Δ) quenching in O/O2/O3/CO2/He/Ar mixtures

    Science.gov (United States)

    Azyazov, V. N.; Mikheyev, P. A.; Postell, D.; Heaven, M. C.

    2010-02-01

    The development of discharge singlet oxygen generators (DSOG's) that can operate at high pressures is required for the power scaling of the discharge oxygen iodine laser. In order to achieve efficient high-pressure DSOG operation it is important to understand the mechanisms by which singlet oxygen (O2(a1Δ)) is quenched in these devices. It has been proposed that three-body deactivation processes of the type O2(a1Δ))+O+M-->2O2+M provide significant energy loss channels. To further explore these reactions the physical and reactive quenching of O2(a1Δ)) in O(3P)/O2/O3/CO2/He/Ar mixtures has been investigated. Oxygen atoms and singlet oxygen molecules were produced by the 248 nm laser photolysis of ozone. The kinetics of O2(a1Δ)) quenching were followed by observing the 1268 nm fluorescence of the O2 a1Δ-X3Ε transition. Fast quenching of O2(a1Δ)) in the presence of oxygen atoms and molecules was observed. The mechanism of the process has been examined using kinetic models, which indicate that quenching by vibrationally excited ozone is the dominant reaction.

  10. Electrogenerated chemiluminescence quenching of Ru(bpy){sub 3} {sup 2+} (bpy=2,2 Prime -bipyridine) in the presence of acetaminophen, salicylic acid and their metabolites

    Energy Technology Data Exchange (ETDEWEB)

    Haslag, Catherine S. [Department of Chemistry, Missouri State University, Springfield, Missouri 65897 (United States); Richter, Mark M., E-mail: MarkRichter@missouristate.edu [Department of Chemistry, Missouri State University, Springfield, Missouri 65897 (United States)

    2012-03-15

    Quenching of Ru(bpy) {sub 3}{sup 2+} (bpy=2,2 Prime -bipyridine) coreactant electrogenerated chemiluminescence (ECL) has been observed in the presence of acetaminophen, salicylic acid and related complexes. However, no quenching is observed with the acetylsalicylic acid. In most instances, quenching is observed with 100-fold excess of quencher (compared to ECL luminophore) with complete quenching observed between 10,000 and 100,000 fold excess. Fluorescence and UV-vis experiments coupled with bulk electrolysis support the formation of benzoquinone products upon electrochemical oxidation. The mechanism of quenching may involve the interaction of the electrochemically generated benzoquinone species with (i) the {sup Low-Asterisk }Ru(bpy){sub 3}{sup 2+} excited state or (ii) highly energetic coreactant radicals. - Highlights: Black-Right-Pointing-Triangle Efficient quenching of the electrogenerated chemiluminescence is observed. Black-Right-Pointing-Triangle Acetaminophen, salicylic acid and related compounds can be detected. Black-Right-Pointing-Triangle The mechanism of quenching involves benzoquinones formed upon electrolysis.

  11. Turn-on fluorescence triggered by selective internal dye replacement in MOFs.

    Science.gov (United States)

    Wuttke, Stefan; Dietl, Christian; Hinterholzinger, Florian M; Hintz, Henrik; Langhals, Heinz; Bein, Thomas

    2014-04-01

    Coordinatively unsaturated metal sites (CUS) are used to create dye-functionalized metal-organic frameworks (MOFs). The quenching of dye fluorescence through interactions with the CUS can be utilised for chemical sensing of Lewis bases that displace the dye from the CUS, resulting in a triggered turn-on fluorescence signal.

  12. Investigation of Laser Induced Fluorescence for Concentration Measurements of Diatomic Sulfur.

    Science.gov (United States)

    1981-12-01

    Once the spectrum was obtained, it was calibrated with N2 laser scatter and a mercury reference run. Fluorescence peaks were identified by com... Freddie , Jr. The Measurement of Quenching Rate Constants Using Fluorescence Emission. MS Thesis. Wright-Patterson Air Force Base, Ohio: Air Force Institute

  13. Interaction of Tannin with Bovine Serum Albumin by Fluorescence Spectrometry

    CERN Document Server

    Dong-Il, Kim; Kye-Ryong, Sin

    2016-01-01

    Interaction between tannin and bovine serum albumin (BSA) was examined by the fluorescent quenching. The process of elimination between BSA and tannin was the one of a stationary state, and the coupling coefficient was one. The working strength between the tannin and the beef serum was hydrophobic one.

  14. Osmotic Stressing, Membrane Leakage, and Fluorescence: An Introductory Biochemistry Demonstration

    Science.gov (United States)

    Seu, Kalani J.

    2015-01-01

    A fluorescence demonstration is described that incorporates several fundamental aspects of an introductory biochemistry course. A variation of a known leakage assay is utilized to prepare vesicles containing a quenched fluorophore. The vesicles are exposed to several osmotic environments ranging from isotonic to hypotonic. The degree of vesicle…

  15. Osmotic Stressing, Membrane Leakage, and Fluorescence: An Introductory Biochemistry Demonstration

    Science.gov (United States)

    Seu, Kalani J.

    2015-01-01

    A fluorescence demonstration is described that incorporates several fundamental aspects of an introductory biochemistry course. A variation of a known leakage assay is utilized to prepare vesicles containing a quenched fluorophore. The vesicles are exposed to several osmotic environments ranging from isotonic to hypotonic. The degree of vesicle…

  16. Effects of thermal quenching on the breakup of pyroclasts

    Science.gov (United States)

    Patel, A.; Manga, M.; Carey, R. J.; Degruyter, W.; Dufek, J.

    2012-12-01

    It is often assumed that magma fragments when it contacts water. Obsidian chips and glass spheres crack when quenched. Vesicular pyroclasts are made of similar glass, so thermal quenching may cause them to break more easily. We performed a set of experiments on air fall pumice from Medicine Lake, California. Density and texture of similar samples are described in Manga et al., Bull Volc 2010. We made "quenched" samples by heating natural pyroclasts to 600 °C, quenching them in water at 21 °C, drying them at 105 °C, and then cooling them to room temperature. We compare these samples with untreated air fall pumice from the same deposit, hereafter referred to as "regular" pumice. We tested whether quenched pumice would 1) shatter more easily in collisions and 2) abrade faster. Our collision experiment methods are described in Dufek et al., Nature Geoscience 2012. Our abrasion experiment methods are described in Manga et al., Bull Volc 2010. We also tested whether individual clasts lose mass upon quenching and whether they increase in effective wet density. Effective wet density is defined as underwater density of a clast when water occupies part of the pore space. Effective wet density, measured as a function of time after immersion, indicates the volume fraction of the pore space that becomes occupied by water. We compare effective wet density of individual clasts pre-quenching with effective wet density after having been quenched, thoroughly dried and then cooled to room temperature. An increase in effective wet density would suggest that bubble walls had been damaged during quenching, allowing water to occupy the pore space faster. We also compare pre-quenching and post-quenching textures using X-Ray Tomography (XRT) and SEM images. Results from collision experiments show no obvious difference between quenched pumice and regular pumice. Quenched pumice abraded more quickly than regular pumice. We find that 1 to 2 % of mass was lost during quenching. Effective

  17. Effect of ion pairing on the fluorescence of berberine, a natural isoquinoline alkaloid

    Science.gov (United States)

    Megyesi, Mónika; Biczók, László

    2007-10-01

    Effect of association with chloride or perchlorate anions on the fluorescence properties of berberine, a cationic isoquinoline alkaloid, has been studied. Interaction with Cl - caused more efficient fluorescence quenching; it significantly accelerated the radiationless deactivation and slowed down the radiative transition. Combined analysis of spectrophotometric, steady-state and time-resolved fluorescence results provided 1.5 × 10 5 M -1 for the equilibrium constant of ion pairing with Cl - in CH 2Cl 2. Both ion pairing and enrichment of the microenvironment of berberine in ions led to excited state quenching in solvents of medium polarity, but only the latter effect was observed in the presence of perchlorates in butyronitrile.

  18. Explaining jet quenching with perturbative QCD alone

    CERN Document Server

    Zapp, Korinna C; Wiedemann, Urs A

    2011-01-01

    We present a new formulation of jet quenching in perturbative QCD beyond the eikonal approximation. Multiple scattering in the medium is modelled through infra-red-continued (2 -> 2) scattering matrix elements in QCD and the parton shower describing further emissions. The interplay between these processes is arranged in terms of a formation time constraint such that coherent emissions can be treated consistently. Emerging partons are hadronised by the Lund string model, tuned to describe LEP data in conjunction with the parton shower. Based on this picture we obtain a good description of the nuclear modification factor R_AA at RHIC and LHC.

  19. Quench modeling of the ATLAS superconducting toroids

    CERN Document Server

    Gavrilin, A V; ten Kate, H H J

    2001-01-01

    Details of the normal zone propagation and the temperature distribution in the coils of ATLAS toroids under quench are presented. A tailor-made mathematical model and corresponding computer code enable obtainment of computational results for the propagation process over the coils in transverse (turn-to-turn) and longitudinal directions. The slow electromagnetic diffusion into the pure aluminum stabilizer of the toroid's conductor, as well as the essentially transient heat transfer through inter-turn insulation, is appropriately included in the model. The effect of nonuniform distribution of the magnetic field and the thermal links to the coil casing on the temperature gradients within the coils is analyzed in full. (5 refs).

  20. Quenching simulation of steel grinding balls

    Energy Technology Data Exchange (ETDEWEB)

    Zapata-Hernandez, O.; Reyes, L. A.; Camurri, C.; Carrasco, C.; Garza-Monte-de-Oca, F.; Colas, R.

    2015-07-01

    The phase transformations of high carbon steel during quenching and equalizing were modelled using commercial computer packages based on the finite element method and the kinetic transformation of steel. The model was used to predict the temperature and microstructural changes taking place within balls of two different sizes that are used for grinding mineral ores. A good correlation between the temperatures measured by inserted thermocouples and those predicted by the model was obtained after modifying the thermal conductivity of the steel within the temperature domain at which mixed phases are present. The phase transformations predicted were confirmed by metallographic analyses. (Author)

  1. Jet Quenching Measurements with ATLAS at LHC

    CERN Document Server

    Brooks, W K; The ATLAS collaboration

    2009-01-01

    A broad program of measurements is planned for heavy ion collisions in ATLAS. With up to a factor of 30 increase in collision energy compared to existing data, significant new insights are anticipated to be obtained with the first data measured. Global features of the LHC collisions will be accessible with the early data and will set the stage for the precision measurements to follow. ATLAS is particularly well suited for exploration of "jet quenching," the extinction of energetic jets in the hot dense medium. Observations of heavy quark jet suppression will be possible with unprecedented energy reach and statistical precision, potentially yielding new insights into the basic mechanisms involved.

  2. $B_{K}$ from quenched overlap QCD

    CERN Document Server

    Garron, N; Hölbling, C; Lellouch, L P; Rebbi, C

    2003-01-01

    We present an exploratory calculation of the standard model Delta S=2 matrix element relevant for indirect CP violation in K -> pi pi decays. The computation is performed with overlap fermions in the quenched approximation at beta=6.0 on a 16^3x32 lattice. The resulting bare matrix element is renormalized non-perturbatively. Our preliminary result is B_K^{NDR}(2 GeV)=0.61(7), where the error does not yet include an estimate of systematic uncertainties.

  3. Copper- or manganese-doped ZnS quantum dots as fluorescent probes for detecting folic acid in aqueous media

    Energy Technology Data Exchange (ETDEWEB)

    Geszke-Moritz, Malgorzata [Laboratoire Reactions et Genie des Procedes (LRGP), Nancy-University, CNRS, 1 rue Grandville, 54001 Nancy Cedex (France); Department of Pharmaceutical Technology, Poznan University of Medical Sciences, Grunwaldzka 6, 60-780 Poznan (Poland); Clavier, Gilles [PPSM, ENS Cachan, CNRS, UniverSud, 61 avenue President Wilson, 94230 Cachan (France); Lulek, Janina [Department of Pharmaceutical Technology, Poznan University of Medical Sciences, Grunwaldzka 6, 60-780 Poznan (Poland); Schneider, Raphaeel, E-mail: raphael.schneider@ensic.inpl-nancy.fr [Laboratoire Reactions et Genie des Procedes (LRGP), Nancy-University, CNRS, 1 rue Grandville, 54001 Nancy Cedex (France)

    2012-04-15

    3-Mercaptopropionic acid-capped core/shell ZnS:Cu/ZnS and ZnS:Mn/ZnS doped quantum dots (QDs) prepared through hydrothermal methods exhibit high photoluminescence intensity as well as good photostability. These water-dispersible nanoparticles exhibit high fluorescence sensitivity to folic acid due to the high affinity of the carboxylate groups and nitrogen atoms of folic acid towards the Zn surface atoms of the doped dots. Quenching of the fluorescence intensity of the QDs allows the detection of folic acid concentrations as low as 11 {mu}M, thus affording a very sensitive system for the sensing of this biologically active molecule in aqueous solution. The possible quenching mechanism is discussed. - Graphical abstract: A sensitive method for the detection of folic acid based on the fluorescence quenching of Mn- or Cu-doped ZnS quantum dots was developed. Highlights: Black-Right-Pointing-Pointer Quenching of the fluorescence intensity of doped ZnS QDs in the presence of folic acid. Black-Right-Pointing-Pointer New fluorescent sensors for folic acid. Black-Right-Pointing-Pointer Detection of folic acid concentrations as low as 11 {mu}M in aqueous solution. Black-Right-Pointing-Pointer The Perrin model and fluorescence lifetimes of ZnS:Mn QDs demonstrate a static quenching mechanism. Black-Right-Pointing-Pointer Quenching efficiency of ZnS:Cu QDs correlates with the Stern-Volmer model.

  4. Using Fluorescence Spectroscopy to Evaluate Hill Parameters and Heterogeneity of Ligand Binding to Cytochromes P450

    Science.gov (United States)

    Marsch, Glenn A.; Carlson, Benjamin; Hansen, Jennifer; Mihelc, Elaine; Martin, Martha V.; Guengerich, F. Peter

    2009-03-01

    The cytochromes P450 (CYPs) are hemoproteins that oxidize many drugs and carcinogens. Binding interactions of two CYPs with Nile Red, pyrene, and alpha-naphthoflavone were studied using fluorescence quenching. Upon interaction with CYPs, fluorescence from pyrene excited-state dimers was quenched more efficiently than fluorescence from pyrene monomers. Quenching data was fit to the Hill equation to determine binding affinities and the Hill parameter n for the interaction of substrates with CYPs. All ligands showed strong binding to the CYPs, especially alpha-naphthoflavone, but exhibited little or no cooperativity in the interaction. Modified Stern-Volmer plots were used to confirm binding affinities, and suggested heterogeneous populations of amino acid fluorophores. Fluorescence anisotropy experiments suggest that CYP molecules tumble more rapidly when alpha-naphthoflavone is added.

  5. CdS Quantum Dots as Fluorescence Probes for Detection of Adriamycin Hydrochloride

    Institute of Scientific and Technical Information of China (English)

    2007-01-01

    Water-soluble CdS quantum dots (CdS-QDs) capped with thioglycolic acid were easily prepared, and a detection method of adriamycin was presented based on the fluorescence quenching of CdS-QDs. It was found that a complex could be formed between cetyltrimethyl ammonium bromide(CTAB) and CdS-QDs by using electrostatic interaction in Britton-Robinson(BR) buffer at pH = 7. 00, and the strong fluorescence emission of the complex was observed at 500nm when the complex was excited at 378 nm. The presence of adriamycin, however, could strongly quench the fluorescence through hydrophobic interaction. The overall quenching percentage as a function of adriamycin concentration matches the Stern-Volmer equation very well. These properties make CdS-QDs a potential fluorescence probe for the detection of adriamycin. The detection limit(3σ) of adriamycin is approximately 10-9 mol/L.

  6. Fluorescence resonance energy transfer from tryptophan in human serum albumin to a bioactive indoloquinolizine system

    Indian Academy of Sciences (India)

    Paramita Das; Arabinda Mallick; Basudeb Haldar; Alok Chakrabarty; Nitin Chattopadhyay

    2007-03-01

    The interaction between a bioactive molecule, 3-acetyl-4-oxo-6,7-dihydro-12H indolo-[2,3-a] quinolizine (AODIQ), with human serum albumin (HSA) has been studied using steady-state absorption and fluorescence techniques. A 1 : 1 complex formation has been established and the binding constant () and free energy change for the process have been reported. The AODIQ-HSA complex results in fluorescence resonance energy transfer (FRET) from the tryptophan moiety of HSA to the probe. The critical energy-transfer distance (0) for FRET and the Stern-Volmer constant (sv) for the fluorescence quenching of the donor in the presence of the acceptor have been determined. Importantly, SV has been shown to be equal to the binding constant itself, implying that the fluorescence quenching arises only from the FRET process. The study suggests that the donor and the acceptor are bound to the same protein at different locations but within the quenching distance.

  7. CdTe quantum dot as a fluorescence probe for vitamin B12 in dosage form

    Science.gov (United States)

    Vaishnavi, E.; Renganathan, R.

    2013-11-01

    We here report the CdTe quantum dot (CdTe QDs)-based sensor for probing vitamin B12 derivatives in aqueous solution. In this paper, simple and sensitive fluorescence quenching measurements has been employed. The Stern-Volmer constant (KSV), quenching rate constant (kq) and binding constant (K) were rationalized from fluorescence quenching measurement. Furthermore, the fluorescence resonance energy transfer (FRET) mechanism was discussed. This method was applicable over the concentration ranging from 1 to 14 μg/mL (VB12) with correlation coefficient of 0.993. The limit of detection (LOD) of VB12 was found to be 0.15 μg/mL. Moreover, the present approach opens a simple pathway for developing cost-effective, sensitive and selective QD-based fluorescence sensors/probes for biologically significant VB12 in pharmaceutical sample with mean recoveries in the range of 100-102.1%.

  8. Inverse Temperature Dependence in Static Quenching versus Calorimetric Exploration: Binding Interaction of Chloramphenicol to β-Lactoglobulin.

    Science.gov (United States)

    Ghosh, Narayani; Mondal, Ramakanta; Mukherjee, Saptarshi

    2015-07-28

    The binding interaction between the whey protein bovine β-lactoglobulin (βLG) with the well-known antibiotic chloramphenicol (Clp) is explored by monitoring the intrinsic fluorescence of βLG. Steady-state and time-resolved fluorescence spectral data reveal that quenching of βLG fluorescence proceeds through ground state complex formation, i.e., static quenching mechanism. However, the drug-protein binding constant is found to vary proportionately with temperature. This anomalous result is explained on the basis of the Arrhenius theory which states that the rate constant varies proportionally with temperature. Thermodynamic parameters like ΔH, ΔS, ΔG, and the stoichiometry for the binding interaction have been estimated by isothermal titration calorimetric (ITC) study. Thermodynamic data show that the binding phenomenon is mainly an entropy driven process suggesting the major role of hydrophobic interaction forces in the Clp-βLG binding. Constant pressure heat capacity change (ΔCp) has been calculated from enthalpy of binding at different temperatures which reveals that hydrophobic interaction is the major operating force. The inverse temperature dependence in static quenching is however resolved from ITC data which show that the binding constant regularly decreases with increase in temperature. The modification of native protein conformation due to binding of drug has been monitored by circular dichroism (CD) spectroscopy. The probable binding location of Clp inside βLG is explored from AutoDock based blind docking simulation.

  9. A halochromic stimuli-responsive reversible fluorescence switching 3, 4, 9, 10-perylene tetracarboxylic acid dye for fabricating rewritable platform

    Science.gov (United States)

    Hariharan, P. S.; Pitchaimani, J.; Madhu, Vedichi; Anthony, Savarimuthu Philip

    2017-02-01

    3, 4, 9, 10-perylene tetracarboxylic acid (PTCA), a strongly fluorescent water soluble dye with halochromic functionality showed pH dependent reversible fluorescence switching. The strong fluorescence of PTCA (Φf = 0.67) in basic medium was completely quenched upon acidification. The fluorescent PTCA has been transferred on to a solid substrate (filter paper and glass plate) that also showed reversible off-on fluorescence switching by acid/base and drying/water vapor exposure. The reversible fluorescence switching of PTCA could be of potential interest for fabricating rewritable fluorescent medium.

  10. Quench dynamics in SRF cavities: can we locate the quench origin with 2nd sound?

    Energy Technology Data Exchange (ETDEWEB)

    Maximenko, Yulia; /Moscow, MIPT; Segatskov, Dmitri A.; /Fermilab

    2011-03-01

    A newly developed method of locating quenches in SRF cavities by detecting second-sound waves has been gaining popularity in SRF laboratories. The technique is based on measurements of time delays between the quench as determined by the RF system and arrival of the second-sound wave to the multiple detectors placed around the cavity in superfluid helium. Unlike multi-channel temperature mapping, this approach requires only a few sensors and simple readout electronics; it can be used with SRF cavities of almost arbitrary shape. One of its drawbacks is that being an indirect method it requires one to solve an inverse problem to find the location of a quench. We tried to solve this inverse problem by using a parametric forward model. By analyzing the data we found that the approximation where the second-sound emitter is a near-singular source does not describe the physical system well enough. A time-dependent analysis of the quench process can help us to put forward a more adequate model. We present here our current algorithm to solve the inverse problem and discuss the experimental results.

  11. Holographic quenches towards a Lifshitz point

    CERN Document Server

    Camilo, Giancarlo; Abdalla, Elcio

    2015-01-01

    We use the holographic duality to study quantum quenches of a strongly coupled CFT that drive the theory towards a non-relativistic fixed point with Lifshitz scaling. We consider the case of a Lifshitz dynamical exponent $z$ close to unity, where the non-relativistic field theory can be understood as a specific deformation of the corresponding CFT and, hence, the standard holographic dictionary can be applied. On the gravity side this amounts to finding a dynamical bulk solution which interpolates between AdS and Lishitz spacetimes as time evolves. We show that an asymptotically Lifshitz black hole is always formed in the final state. This indicates that it is impossible to reach the vacuum state of the Lifshitz theory from the CFT vacuum as a result of the proposed quenching mechanism. The nonequilibrium dynamics following the breaking of the relativistic scaling symmetry is also probed using both local and non-local observables. In particular, we conclude that the equilibration process happens in a top-down...

  12. Heat transfer model for quenching by submerging

    Energy Technology Data Exchange (ETDEWEB)

    Passarella, D N; Varas, F [Departamento de Matematica Aplicada II, E.T.S. de Ing. de Telecomunicacion, Universidad de Vigo, Campus Marcosende, 36310 Vigo (Spain); MartIn, E B, E-mail: diego@dma.uvigo.es, E-mail: fvaras@uvigo.es, E-mail: emortega@uvigo.es [Area de Mecanica de Fluidos, E.T.S. de Ing. Industriales, Universidad de Vigo, Campus Marcosende, 36310 Vigo (Spain)

    2011-05-01

    In quenching by submerging the workpiece is cooled due to vaporization, convective flow and interaction of both mechanisms. The dynamics of these phenomena is very complex and the corresponding heat fluxes are strongly dependent on local flow variables such as velocity of fluid and vapor fraction. This local dependence may produce very different cooling rates along the piece, responsible for inappropriate metallurgical transformations, variability of material properties and residual stresses. In order to obtain an accurate description of cooling during quenching, a mathematical model of heat transfer is presented here. The model is based on the drift-flux mixture-model for multiphase flows, including an equation of conservation of energy for the liquid phase and specific boundary conditions that account for evaporation and presence of vapor phase on the surface of the piece. The model was implemented on Comsol Multiphysics software. Generation of appropriate initial and boundary conditions, as well as numerical resolution details, is briefly discussed. To test the model, a simple flow condition was analyzed. The effect of vapor fraction on heat transfer is assessed. The presence of the typical vapor blanket and its collapse can be recovered by the model, and its effect on the cooling rates on different parts of the piece is analyzed. Comparisons between numerical results and data from literature are made.

  13. Quench thresholds in operational superconducting magnets

    Energy Technology Data Exchange (ETDEWEB)

    Allinger, J; Danby, G; Foelsche, H; Jackson, J; Lowenstein, D; Prodell, A; Weng, W

    1978-01-01

    Superconducting magnets exposed to intense primary proton beams in high energy physics applications are subject to potentially extreme heat deposition. The beam power density, its duration and spatial distribution, the current density in the superconductor and, potentially, in the normal metal substrate, as well as the construction and cooling details of the magnet, are all relevant parameters. An extension of some earlier work is discussed in which 28.5 GeV/c proton beams with up to 50 k joules of energy were targeted upstream from a 4 m long, 4 T dipole magnet used to deflect the protons through an angle of 8/sup 0/. Quench thresholds much greater than the enthalpy limit of the magnet materials were observed. In the beam exposure experiment described, intense beams of 1.5 GeV/c protons have been deflected directly into the magnet coil at relatively steep angles of incidence. The magnet quench threshold was studied by varying the beam currents and beam sizes.

  14. Quorum Quenching Revisited—From Signal Decays to Signalling Confusion

    Directory of Open Access Journals (Sweden)

    Kok-Gan Chan

    2012-04-01

    Full Text Available In a polymicrobial community, while some bacteria are communicating with neighboring cells (quorum sensing, others are interrupting the communication (quorum quenching, thus creating a constant arms race between intercellular communication. In the past decade, numerous quorum quenching enzymes have been found and initially thought to inactivate the signalling molecules. Though this is widely accepted, the actual roles of these quorum quenching enzymes are now being uncovered. Recent evidence extends the role of quorum quenching to detoxification or metabolism of signalling molecules as food and energy source; this includes “signalling confusion”, a term coined in this paper to refer to the phenomenon of non-destructive modification of signalling molecules. While quorum quenching has been explored as a novel anti-infective therapy targeting, quorum sensing evidence begins to show the development of resistance against quorum quenching.

  15. System and method for quench protection of a superconductor

    Science.gov (United States)

    Huang, Xianrui; Sivasubramaniam, Kiruba Haran; Bray, James William; Ryan, David Thomas

    2008-03-11

    A system and method for protecting a superconductor from a quench condition. A quench protection system is provided to protect the superconductor from damage due to a quench condition. The