WorldWideScience

Sample records for networks stable bipartite

  1. Bipartite Networks

    NARCIS (Netherlands)

    Agneessens, F.; Moser, C.; Barnett, G.A.

    2011-01-01

    Bipartite networks refer to a specific kind of network in which the nodes (or actors) can be partitioned into two subsets based on the fact that no links exist between actors within each subset, but only between the two subsets. Due to the partition of actors in two sets and the absence of relations

  2. Fractal and multifractal analyses of bipartite networks

    Science.gov (United States)

    Liu, Jin-Long; Wang, Jian; Yu, Zu-Guo; Xie, Xian-Hua

    2017-03-01

    Bipartite networks have attracted considerable interest in various fields. Fractality and multifractality of unipartite (classical) networks have been studied in recent years, but there is no work to study these properties of bipartite networks. In this paper, we try to unfold the self-similarity structure of bipartite networks by performing the fractal and multifractal analyses for a variety of real-world bipartite network data sets and models. First, we find the fractality in some bipartite networks, including the CiteULike, Netflix, MovieLens (ml-20m), Delicious data sets and (u, v)-flower model. Meanwhile, we observe the shifted power-law or exponential behavior in other several networks. We then focus on the multifractal properties of bipartite networks. Our results indicate that the multifractality exists in those bipartite networks possessing fractality. To capture the inherent attribute of bipartite network with two types different nodes, we give the different weights for the nodes of different classes, and show the existence of multifractality in these node-weighted bipartite networks. In addition, for the data sets with ratings, we modify the two existing algorithms for fractal and multifractal analyses of edge-weighted unipartite networks to study the self-similarity of the corresponding edge-weighted bipartite networks. The results show that our modified algorithms are feasible and can effectively uncover the self-similarity structure of these edge-weighted bipartite networks and their corresponding node-weighted versions.

  3. Epidemic thresholds for bipartite networks

    Science.gov (United States)

    Hernández, D. G.; Risau-Gusman, S.

    2013-11-01

    It is well known that sexually transmitted diseases (STD) spread across a network of human sexual contacts. This network is most often bipartite, as most STD are transmitted between men and women. Even though network models in epidemiology have quite a long history now, there are few general results about bipartite networks. One of them is the simple dependence, predicted using the mean field approximation, between the epidemic threshold and the average and variance of the degree distribution of the network. Here we show that going beyond this approximation can lead to qualitatively different results that are supported by numerical simulations. One of the new features, that can be relevant for applications, is the existence of a critical value for the infectivity of each population, below which no epidemics can arise, regardless of the value of the infectivity of the other population.

  4. Effect of attachment strategies on bipartite networks

    DEFF Research Database (Denmark)

    Ganguly, N.; Saha, S.; Maiti, A.

    2013-01-01

    Bipartite systems show remarkable variations in their topological asymptotic properties, e. g., in their degree distribution. Such variations depend on the underlying growth dynamics. A scenario of particular importance is when the two partitions of the bipartite structure do not grow at an equal...... rate. Here, we focus on the case where one of the partitions can be assumed to be fixed while the other partition grows in time as observed in the codon-gene or alphabet-word network. We show that subtle changes in growth dynamics, particularly in the attachment kernel, can lead to drastic changes...... of the emergent topological properties. We present a detail analysis of various growth strategies, including sequential and parallel addition of nodes, as well as with and without replacement attachment kernels. Analytical results have been compared with stochastic simulations as well as with real systems showing...

  5. Bipartite quantum states and random complex networks

    International Nuclear Information System (INIS)

    Garnerone, Silvano; Zanardi, Paolo; Giorda, Paolo

    2012-01-01

    We introduce a mapping between graphs and pure quantum bipartite states and show that the associated entanglement entropy conveys non-trivial information about the structure of the graph. Our primary goal is to investigate the family of random graphs known as complex networks. In the case of classical random graphs, we derive an analytic expression for the averaged entanglement entropy S-bar while for general complex networks we rely on numerics. For a large number of nodes n we find a scaling S-bar ∼c log n +g e where both the prefactor c and the sub-leading O(1) term g e are characteristic of the different classes of complex networks. In particular, g e encodes topological features of the graphs and is named network topological entropy. Our results suggest that quantum entanglement may provide a powerful tool for the analysis of large complex networks with non-trivial topological properties. (paper)

  6. A novel community detection method in bipartite networks

    Science.gov (United States)

    Zhou, Cangqi; Feng, Liang; Zhao, Qianchuan

    2018-02-01

    Community structure is a common and important feature in many complex networks, including bipartite networks, which are used as a standard model for many empirical networks comprised of two types of nodes. In this paper, we propose a two-stage method for detecting community structure in bipartite networks. Firstly, we extend the widely-used Louvain algorithm to bipartite networks. The effectiveness and efficiency of the Louvain algorithm have been proved by many applications. However, there lacks a Louvain-like algorithm specially modified for bipartite networks. Based on bipartite modularity, a measure that extends unipartite modularity and that quantifies the strength of partitions in bipartite networks, we fill the gap by developing the Bi-Louvain algorithm that iteratively groups the nodes in each part by turns. This algorithm in bipartite networks often produces a balanced network structure with equal numbers of two types of nodes. Secondly, for the balanced network yielded by the first algorithm, we use an agglomerative clustering method to further cluster the network. We demonstrate that the calculation of the gain of modularity of each aggregation, and the operation of joining two communities can be compactly calculated by matrix operations for all pairs of communities simultaneously. At last, a complete hierarchical community structure is unfolded. We apply our method to two benchmark data sets and a large-scale data set from an e-commerce company, showing that it effectively identifies community structure in bipartite networks.

  7. Clustering coefficient and community structure of bipartite networks

    Science.gov (United States)

    Zhang, Peng; Wang, Jinliang; Li, Xiaojia; Li, Menghui; Di, Zengru; Fan, Ying

    2008-12-01

    Many real-world networks display natural bipartite structure, where the basic cycle is a square. In this paper, with the similar consideration of standard clustering coefficient in binary networks, a definition of the clustering coefficient for bipartite networks based on the fraction of squares is proposed. In order to detect community structures in bipartite networks, two different edge clustering coefficients LC4 and LC3 of bipartite networks are defined, which are based on squares and triples respectively. With the algorithm of cutting the edge with the least clustering coefficient, communities in artificial and real world networks are identified. The results reveal that investigating bipartite networks based on the original structure can show the detailed properties that is helpful to get deep understanding about the networks.

  8. Grand canonical validation of the bipartite international trade network

    Science.gov (United States)

    Straka, Mika J.; Caldarelli, Guido; Saracco, Fabio

    2017-08-01

    Devising strategies for economic development in a globally competitive landscape requires a solid and unbiased understanding of countries' technological advancements and similarities among export products. Both can be addressed through the bipartite representation of the International Trade Network. In this paper, we apply the recently proposed grand canonical projection algorithm to uncover country and product communities. Contrary to past endeavors, our methodology, based on information theory, creates monopartite projections in an unbiased and analytically tractable way. Single links between countries or products represent statistically significant signals, which are not accounted for by null models such as the bipartite configuration model. We find stable country communities reflecting the socioeconomic distinction in developed, newly industrialized, and developing countries. Furthermore, we observe product clusters based on the aforementioned country groups. Our analysis reveals the existence of a complicated structure in the bipartite International Trade Network: apart from the diversification of export baskets from the most basic to the most exclusive products, we observe a statistically significant signal of an export specialization mechanism towards more sophisticated products.

  9. Connectivity and Nestedness in Bipartite Networks from Community Ecology

    Energy Technology Data Exchange (ETDEWEB)

    Corso, Gilberto [Departamento de Biofisica e Farmacologia, Centro de Biociencias, Universidade Federal do Rio Grande do Norte, UFRN - Campus Universitario, Lagoa Nova, CEP 59078 972, Natal, RN (Brazil); De Araujo, A I Levartoski [Instituto Federal de Educacao, Ciencia e Tecnologia do Ceara Av. Treze de Maio, 2081 - Benfica CEP 60040-531 - Fortaleza, CE (Brazil); De Almeida, Adriana M, E-mail: corso@cb.ufrn.br [Departamento de Botanica, Ecologia e Zoologia, Centro de Biociencias, Universidade Federal do Rio Grande do Norte, UFRN - Campus Universitario, Lagoa Nova, CEP 59078 972, Natal, RN (Brazil)

    2011-03-01

    Bipartite networks and the nestedness concept appear in two different contexts in theoretical ecology: community ecology and islands biogeography. From a mathematical perspective nestedness is a pattern in a bipartite network. There are several nestedness indices in the market, we used the index {nu}. The index {nu} is found using the relation {nu} = 1 - {tau} where {tau} is the temperature of the adjacency matrix of the bipartite network. By its turn {tau} is defined with help of the Manhattan distance of the occupied elements of the adjacency matrix of the bipartite network. We prove that the nestedness index {nu} is a function of the connectivities of the bipartite network. In addition we find a concise way to find {nu} which avoid cumbersome algorithm manupulation of the adjacency matrix.

  10. Connectivity and Nestedness in Bipartite Networks from Community Ecology

    International Nuclear Information System (INIS)

    Corso, Gilberto; De Araujo, A I Levartoski; De Almeida, Adriana M

    2011-01-01

    Bipartite networks and the nestedness concept appear in two different contexts in theoretical ecology: community ecology and islands biogeography. From a mathematical perspective nestedness is a pattern in a bipartite network. There are several nestedness indices in the market, we used the index ν. The index ν is found using the relation ν = 1 - τ where τ is the temperature of the adjacency matrix of the bipartite network. By its turn τ is defined with help of the Manhattan distance of the occupied elements of the adjacency matrix of the bipartite network. We prove that the nestedness index ν is a function of the connectivities of the bipartite network. In addition we find a concise way to find ν which avoid cumbersome algorithm manupulation of the adjacency matrix.

  11. Asymmetric intimacy and algorithm for detecting communities in bipartite networks

    Science.gov (United States)

    Wang, Xingyuan; Qin, Xiaomeng

    2016-11-01

    In this paper, an algorithm to choose a good partition in bipartite networks has been proposed. Bipartite networks have more theoretical significance and broader prospect of application. In view of distinctive structure of bipartite networks, in our method, two parameters are defined to show the relationships between the same type nodes and heterogeneous nodes respectively. Moreover, our algorithm employs a new method of finding and expanding the core communities in bipartite networks. Two kinds of nodes are handled separately and merged, and then the sub-communities are obtained. After that, objective communities will be found according to the merging rule. The proposed algorithm has been simulated in real-world networks and artificial networks, and the result verifies the accuracy and reliability of the parameters on intimacy for our algorithm. Eventually, comparisons with similar algorithms depict that the proposed algorithm has better performance.

  12. Competition for popularity in bipartite networks

    Science.gov (United States)

    Beguerisse Díaz, Mariano; Porter, Mason A.; Onnela, Jukka-Pekka

    2010-12-01

    We present a dynamical model for rewiring and attachment in bipartite networks. Edges are placed between nodes that belong to catalogs that can either be fixed in size or growing in size. The model is motivated by an empirical study of data from the video rental service Netflix, which invites its users to give ratings to the videos available in its catalog. We find that the distribution of the number of ratings given by users and that of the number of ratings received by videos both follow a power law with an exponential cutoff. We also examine the activity patterns of Netflix users and find bursts of intense video-rating activity followed by long periods of inactivity. We derive ordinary differential equations to model the acquisition of edges by the nodes over time and obtain the corresponding time-dependent degree distributions. We then compare our results with the Netflix data and find good agreement. We conclude with a discussion of how catalog models can be used to study systems in which agents are forced to choose, rate, or prioritize their interactions from a large set of options.

  13. Degree distributions of bipartite networks and their projections

    Science.gov (United States)

    Vasques Filho, Demival; O'Neale, Dion

    Bipartite networks play an important role in the analysis of social and economic systems as they explicitly show the conceptual links between different types of entities. As an example, it is possible to build networks to investigate interactions regarding scientific and technological innovation that are well represented by a natural bipartite structure. Since we are often most interested in only one of the node types (e.g. the authors in an author-publication network), it is common to end up working with a projected version of the underlying bipartite network. The topology of projections and the dynamics that take place on it are highly dependent on the probability distribution of nodes degrees. We use the formalism of generating functions to infer how the degree distributions of the original bipartite network affect the distribution in the projected version. Moreover, we create artificial bipartite graphs by arbitrarily choosing degree distributions for the sets of nodes and construct the projection to analyze the resulting probability distribution. Our findings show that when projecting onto a particular set of nodes, the resulting degree distribution follows the behavior of the probability distribution of such nodes, subject, however, to the tail of the opposite distribution.

  14. Two classes of bipartite networks: nested biological and social systems.

    Science.gov (United States)

    Burgos, Enrique; Ceva, Horacio; Hernández, Laura; Perazzo, R P J; Devoto, Mariano; Medan, Diego

    2008-10-01

    Bipartite graphs have received some attention in the study of social networks and of biological mutualistic systems. A generalization of a previous model is presented, that evolves the topology of the graph in order to optimally account for a given contact preference rule between the two guilds of the network. As a result, social and biological graphs are classified as belonging to two clearly different classes. Projected graphs, linking the agents of only one guild, are obtained from the original bipartite graph. The corresponding evolution of its statistical properties is also studied. An example of a biological mutualistic network is analyzed in detail, and it is found that the model provides a very good fitting of all the main statistical features. The model also provides a proper qualitative description of the same features observed in social webs, suggesting the possible reasons underlying the difference in the organization of these two kinds of bipartite networks.

  15. Disentangling bipartite and core-periphery structure in financial networks

    OpenAIRE

    Barucca, Paolo; Lillo, Fabrizio

    2015-01-01

    A growing number of systems are represented as networks whose architecture conveys significant information and determines many of their properties. Examples of network architecture include modular, bipartite, and core-periphery structures. However inferring the network structure is a non trivial task and can depend sometimes on the chosen null model. Here we propose a method for classifying network structures and ranking its nodes in a statistically well-grounded fashion. The method is based ...

  16. Data Acquisition Based on Stable Matching of Bipartite Graph in Cooperative Vehicle-Infrastructure Systems.

    Science.gov (United States)

    Tang, Xiaolan; Hong, Donghui; Chen, Wenlong

    2017-06-08

    Existing studies on data acquisition in vehicular networks often take the mobile vehicular nodes as data carriers. However, their autonomous movements, limited resources and security risks impact the quality of services. In this article, we propose a data acquisition model using stable matching of bipartite graph in cooperative vehicle-infrastructure systems, namely, DAS. Contents are distributed to roadside units, while vehicular nodes support supplementary storage. The original distribution problem is formulated as a stable matching problem of bipartite graph, where the data and the storage cells compose two sides of vertices. Regarding the factors relevant with the access ratio and delay, the preference rankings for contents and roadside units are calculated, respectively. With a multi-replica preprocessing algorithm to handle the potential one-to-many mapping, the matching problem is addressed in polynomial time. In addition, vehicular nodes carry and forward assistant contents to deliver the failed packets because of bandwidth competition. Furthermore, an incentive strategy is put forward to boost the vehicle cooperation and to achieve a fair bandwidth allocation at roadside units. Experiments show that DAS achieves a high access ratio and a small storage cost with an acceptable delay.

  17. Disentangling bipartite and core-periphery structure in financial networks

    International Nuclear Information System (INIS)

    Barucca, Paolo; Lillo, Fabrizio

    2016-01-01

    A growing number of systems are represented as networks whose architecture conveys significant information and determines many of their properties. Examples of network architecture include modular, bipartite, and core-periphery structures. However inferring the network structure is a non trivial task and can depend sometimes on the chosen null model. Here we propose a method for classifying network structures and ranking its nodes in a statistically well-grounded fashion. The method is based on the use of Belief Propagation for learning through Entropy Maximization on both the Stochastic Block Model (SBM) and the degree-corrected Stochastic Block Model (dcSBM). As a specific application we show how the combined use of the two ensembles—SBM and dcSBM—allows to disentangle the bipartite and the core-periphery structure in the case of the e-MID interbank network. Specifically we find that, taking into account the degree, this interbank network is better described by a bipartite structure, while using the SBM the core-periphery structure emerges only when data are aggregated for more than a week.

  18. Epidemic spread in bipartite network by considering risk awareness

    Science.gov (United States)

    Han, She; Sun, Mei; Ampimah, Benjamin Chris; Han, Dun

    2018-02-01

    Human awareness plays an important role in the spread of infectious diseases and the control of propagation patterns. Exploring the interplay between human awareness and epidemic spreading is a topic that has been receiving increasing attention. Considering the fact, some well-known diseases only spread between different species we propose a theoretical analysis of the Susceptible-Infected-Susceptible (SIS) epidemic spread from the perspective of bipartite network and risk aversion. Using mean field theory, the epidemic threshold is calculated theoretically. Simulation results are consistent with the proposed analytic model. The results show that, the final infection density is negative linear with the value of individuals' risk awareness. Therefore, the epidemic spread could be effectively suppressed by improving individuals' risk awareness.

  19. Identifying online user reputation of user-object bipartite networks

    Science.gov (United States)

    Liu, Xiao-Lu; Liu, Jian-Guo; Yang, Kai; Guo, Qiang; Han, Jing-Ti

    2017-02-01

    Identifying online user reputation based on the rating information of the user-object bipartite networks is important for understanding online user collective behaviors. Based on the Bayesian analysis, we present a parameter-free algorithm for ranking online user reputation, where the user reputation is calculated based on the probability that their ratings are consistent with the main part of all user opinions. The experimental results show that the AUC values of the presented algorithm could reach 0.8929 and 0.8483 for the MovieLens and Netflix data sets, respectively, which is better than the results generated by the CR and IARR methods. Furthermore, the experimental results for different user groups indicate that the presented algorithm outperforms the iterative ranking methods in both ranking accuracy and computation complexity. Moreover, the results for the synthetic networks show that the computation complexity of the presented algorithm is a linear function of the network size, which suggests that the presented algorithm is very effective and efficient for the large scale dynamic online systems.

  20. Common neighbours and the local-community-paradigm for topological link prediction in bipartite networks

    International Nuclear Information System (INIS)

    Daminelli, Simone; Thomas, Josephine Maria; Durán, Claudio; Vittorio Cannistraci, Carlo

    2015-01-01

    Bipartite networks are powerful descriptions of complex systems characterized by two different classes of nodes and connections allowed only across but not within the two classes. Unveiling physical principles, building theories and suggesting physical models to predict bipartite links such as product-consumer connections in recommendation systems or drug–target interactions in molecular networks can provide priceless information to improve e-commerce or to accelerate pharmaceutical research. The prediction of nonobserved connections starting from those already present in the topology of a network is known as the link-prediction problem. It represents an important subject both in many-body interaction theory in physics and in new algorithms for applied tools in computer science. The rationale is that the existing connectivity structure of a network can suggest where new connections can appear with higher likelihood in an evolving network, or where nonobserved connections are missing in a partially known network. Surprisingly, current complex network theory presents a theoretical bottle-neck: a general framework for local-based link prediction directly in the bipartite domain is missing. Here, we overcome this theoretical obstacle and present a formal definition of common neighbour index and local-community-paradigm (LCP) for bipartite networks. As a consequence, we are able to introduce the first node-neighbourhood-based and LCP-based models for topological link prediction that utilize the bipartite domain. We performed link prediction evaluations in several networks of different size and of disparate origin, including technological, social and biological systems. Our models significantly improve topological prediction in many bipartite networks because they exploit local physical driving-forces that participate in the formation and organization of many real-world bipartite networks. Furthermore, we present a local-based formalism that allows to intuitively

  1. Common neighbours and the local-community-paradigm for topological link prediction in bipartite networks

    Science.gov (United States)

    Daminelli, Simone; Thomas, Josephine Maria; Durán, Claudio; Vittorio Cannistraci, Carlo

    2015-11-01

    Bipartite networks are powerful descriptions of complex systems characterized by two different classes of nodes and connections allowed only across but not within the two classes. Unveiling physical principles, building theories and suggesting physical models to predict bipartite links such as product-consumer connections in recommendation systems or drug-target interactions in molecular networks can provide priceless information to improve e-commerce or to accelerate pharmaceutical research. The prediction of nonobserved connections starting from those already present in the topology of a network is known as the link-prediction problem. It represents an important subject both in many-body interaction theory in physics and in new algorithms for applied tools in computer science. The rationale is that the existing connectivity structure of a network can suggest where new connections can appear with higher likelihood in an evolving network, or where nonobserved connections are missing in a partially known network. Surprisingly, current complex network theory presents a theoretical bottle-neck: a general framework for local-based link prediction directly in the bipartite domain is missing. Here, we overcome this theoretical obstacle and present a formal definition of common neighbour index and local-community-paradigm (LCP) for bipartite networks. As a consequence, we are able to introduce the first node-neighbourhood-based and LCP-based models for topological link prediction that utilize the bipartite domain. We performed link prediction evaluations in several networks of different size and of disparate origin, including technological, social and biological systems. Our models significantly improve topological prediction in many bipartite networks because they exploit local physical driving-forces that participate in the formation and organization of many real-world bipartite networks. Furthermore, we present a local-based formalism that allows to intuitively

  2. The Random Walk Model Based on Bipartite Network

    Directory of Open Access Journals (Sweden)

    Zhang Man-Dun

    2016-01-01

    Full Text Available With the continuing development of the electronic commerce and growth of network information, there is a growing possibility for citizens to be confused by the information. Though the traditional technology of information retrieval have the ability to relieve the overload of information in some extent, it can not offer a targeted personality service based on user’s interests and activities. In this context, the recommendation algorithm arose. In this paper, on the basis of conventional recommendation, we studied the scheme of random walk based on bipartite network and the application of it. We put forward a similarity measurement based on implicit feedback. In this method, a uneven character vector is imported(the weight of item in the system. We put forward a improved random walk pattern which make use of partial or incomplete neighbor information to create recommendation information. In the end, there is an experiment in the real data set, the recommendation accuracy and practicality are improved. We promise the reality of the result of the experiment

  3. Predictive Characteristics of Co-authorship Networks: Comparing the Unweighted, Weighted, and Bipartite Cases

    Directory of Open Access Journals (Sweden)

    Raf Guns

    2016-09-01

    Full Text Available Purpose: This study aims to answer the question to what extent different types of networks can be used to predict future co-authorship among authors. Design/methodology/approach: We compare three types of networks: unweighted networks, in which a link represents a past collaboration; weighted networks, in which links are weighted by the number of joint publications; and bipartite author-publication networks. The analysis investigates their relation to positive stability, as well as their potential in predicting links in future versions of the co-authorship network. Several hypotheses are tested. Findings: Among other results, we find that weighted networks do not automatically lead to better predictions. Bipartite networks, however, outperform unweighted networks in almost all cases. Research limitations: Only two relatively small case studies are considered. Practical implications: The study suggests that future link prediction studies on co-occurrence networks should consider using the bipartite network as a training network. Originality/value: This is the first systematic comparison of unweighted, weighted, and bipartite training networks in link prediction.

  4. Effect of the social influence on topological properties of user-object bipartite networks

    Science.gov (United States)

    Liu, Jian-Guo; Hu, Zhaolong; Guo, Qiang

    2013-11-01

    Social influence plays an important role in analyzing online users' collective behaviors [Salganik et al., Science 311, 854 (2006)]. However, the effect of the social influence from the viewpoint of theoretical model is missing. In this paper, by taking into account the social influence and users' preferences, we develop a theoretical model to analyze the topological properties of user-object bipartite networks, including the degree distribution, average nearest neighbor degree and the bipartite clustering coefficient, as well as topological properties of the original user-object networks and their unipartite projections. According to the users' preferences and the global ranking effect, we analyze the theoretical results for two benchmark data sets, Amazon and Bookcrossing, which are approximately consistent with the empirical results. This work suggests that this model is feasible to analyze topological properties of bipartite networks in terms of the social influence and the users' preferences.

  5. Bayesian latent feature modeling for modeling bipartite networks with overlapping groups

    DEFF Research Database (Denmark)

    Jørgensen, Philip H.; Mørup, Morten; Schmidt, Mikkel Nørgaard

    2016-01-01

    by the notion of community structure such that the edge density within groups is higher than between groups. Our model further assumes that entities can have different propensities of generating links in one of the modes. The proposed framework is contrasted on both synthetic and real bi-partite networks...... to the infinite relational model and the infinite Bernoulli mixture model. We find that the model provides a new latent feature representation of structure while in link-prediction performing close to existing models. Our current extension of the notion of communities and collapsed inference to binary latent...... feature representations in bipartite networks provides a new framework for accounting for structure in bi-partite networks using binary latent feature representations providing interpretable representations that well characterize structure as quantified by link prediction....

  6. Bipartite Networks of Wikipediaʼs Articles and Authors: a Meso-level Approach

    DEFF Research Database (Denmark)

    Jesus, Rut; Hansen-Schwartz, Martin; Jørgensen, Sune Lehmann

    2009-01-01

    This exploratory study investigates the bipartite network of articles linked by common editors in Wikipedia, 'The Free Encyclopedia that Anyone Can Edit'. We use the articles in the categories (to depth three) of Physics and Philosophy and extract and focus on significant editors (at least 7 or 10...... edits per each article). We construct a bipartite network, and from it, overlapping cliques of densely connected articles and editors. We cluster these densely connected cliques into larger modules to study examples of larger groups that display how volunteer editors flock around articles driven...

  7. A simple model of bipartite cooperation for ecological and organizational networks.

    Science.gov (United States)

    Saavedra, Serguei; Reed-Tsochas, Felix; Uzzi, Brian

    2009-01-22

    In theoretical ecology, simple stochastic models that satisfy two basic conditions about the distribution of niche values and feeding ranges have proved successful in reproducing the overall structural properties of real food webs, using species richness and connectance as the only input parameters. Recently, more detailed models have incorporated higher levels of constraint in order to reproduce the actual links observed in real food webs. Here, building on previous stochastic models of consumer-resource interactions between species, we propose a highly parsimonious model that can reproduce the overall bipartite structure of cooperative partner-partner interactions, as exemplified by plant-animal mutualistic networks. Our stochastic model of bipartite cooperation uses simple specialization and interaction rules, and only requires three empirical input parameters. We test the bipartite cooperation model on ten large pollination data sets that have been compiled in the literature, and find that it successfully replicates the degree distribution, nestedness and modularity of the empirical networks. These properties are regarded as key to understanding cooperation in mutualistic networks. We also apply our model to an extensive data set of two classes of company engaged in joint production in the garment industry. Using the same metrics, we find that the network of manufacturer-contractor interactions exhibits similar structural patterns to plant-animal pollination networks. This surprising correspondence between ecological and organizational networks suggests that the simple rules of cooperation that generate bipartite networks may be generic, and could prove relevant in many different domains, ranging from biological systems to human society.

  8. Effects of the bipartite structure of a network on performance of recommenders

    Science.gov (United States)

    Wang, Qing-Xian; Li, Jian; Luo, Xin; Xu, Jian-Jun; Shang, Ming-Sheng

    2018-02-01

    Recommender systems aim to predict people's preferences for online items by analyzing their historical behaviors. A recommender can be modeled as a high-dimensional and sparse bipartite network, where the key issue is to understand the relation between the network structure and a recommender's performance. To address this issue, we choose three network characteristics, clustering coefficient, network density and user-item ratio, as the analyzing targets. For the cluster coefficient, we adopt the Degree-preserving rewiring algorithm to obtain a series of bipartite network with varying cluster coefficient, while the degree of user and item keep unchanged. Furthermore, five state-of-the-art recommenders are applied on two real datasets. The performances of recommenders are measured by both numerical and physical metrics. These results show that a recommender's performance is positively related to the clustering coefficient of a bipartite network. Meanwhile, higher density of a bipartite network can provide more accurate but less diverse or novel recommendations. Furthermore, the user-item ratio is positively correlated with the accuracy metrics but negatively correlated with the diverse and novel metrics.

  9. Balanced Bipartite Graph Based Register Allocation for Network Processors in Mobile and Wireless Networks

    Directory of Open Access Journals (Sweden)

    Feilong Tang

    2010-01-01

    Full Text Available Mobile and wireless networks are the integrant infrastructure of mobile and pervasive computing that aims at providing transparent and preferred information and services for people anytime anywhere. In such environments, end-to-end network bandwidth is crucial to improve user's transparent experience when providing on-demand services such as mobile video playing. As a result, powerful computing power is required for networked nodes, especially for routers. General-purpose processors cannot meet such requirements due to their limited processing ability, and poor programmability and scalability. Intel's network processor IXP is specially designed for fast packet processing to achieve a broad bandwidth. IXP provides a large number of registers to reduce the number of memory accesses. Registers in an IXP are physically partitioned as two banks so that two source operands in an instruction have to come from the two banks respectively, which makes the IXP register allocation tricky and different from conventional ones. In this paper, we investigate an approach for efficiently generating balanced bipartite graph and register allocation algorithms for the dual-bank register allocation in IXPs. The paper presents a graph uniform 2-way partition algorithm (FPT, which provides an optimal solution to the graph partition, and a heuristic algorithm for generating balanced bipartite graph. Finally, we design a framework for IXP register allocation. Experimental results demonstrate the framework and the algorithms are efficient in register allocation for IXP network processors.

  10. Enhanced capital-asset pricing model for the reconstruction of bipartite financial networks

    Science.gov (United States)

    Squartini, Tiziano; Almog, Assaf; Caldarelli, Guido; van Lelyveld, Iman; Garlaschelli, Diego; Cimini, Giulio

    2017-09-01

    Reconstructing patterns of interconnections from partial information is one of the most important issues in the statistical physics of complex networks. A paramount example is provided by financial networks. In fact, the spreading and amplification of financial distress in capital markets are strongly affected by the interconnections among financial institutions. Yet, while the aggregate balance sheets of institutions are publicly disclosed, information on single positions is mostly confidential and, as such, unavailable. Standard approaches to reconstruct the network of financial interconnection produce unrealistically dense topologies, leading to a biased estimation of systemic risk. Moreover, reconstruction techniques are generally designed for monopartite networks of bilateral exposures between financial institutions, thus failing in reproducing bipartite networks of security holdings (e.g., investment portfolios). Here we propose a reconstruction method based on constrained entropy maximization, tailored for bipartite financial networks. Such a procedure enhances the traditional capital-asset pricing model (CAPM) and allows us to reproduce the correct topology of the network. We test this enhanced CAPM (ECAPM) method on a dataset, collected by the European Central Bank, of detailed security holdings of European institutional sectors over a period of six years (2009-2015). Our approach outperforms the traditional CAPM and the recently proposed maximum-entropy CAPM both in reproducing the network topology and in estimating systemic risk due to fire sales spillovers. In general, ECAPM can be applied to the whole class of weighted bipartite networks described by the fitness model.

  11. Enhanced capital-asset pricing model for the reconstruction of bipartite financial networks.

    Science.gov (United States)

    Squartini, Tiziano; Almog, Assaf; Caldarelli, Guido; van Lelyveld, Iman; Garlaschelli, Diego; Cimini, Giulio

    2017-09-01

    Reconstructing patterns of interconnections from partial information is one of the most important issues in the statistical physics of complex networks. A paramount example is provided by financial networks. In fact, the spreading and amplification of financial distress in capital markets are strongly affected by the interconnections among financial institutions. Yet, while the aggregate balance sheets of institutions are publicly disclosed, information on single positions is mostly confidential and, as such, unavailable. Standard approaches to reconstruct the network of financial interconnection produce unrealistically dense topologies, leading to a biased estimation of systemic risk. Moreover, reconstruction techniques are generally designed for monopartite networks of bilateral exposures between financial institutions, thus failing in reproducing bipartite networks of security holdings (e.g., investment portfolios). Here we propose a reconstruction method based on constrained entropy maximization, tailored for bipartite financial networks. Such a procedure enhances the traditional capital-asset pricing model (CAPM) and allows us to reproduce the correct topology of the network. We test this enhanced CAPM (ECAPM) method on a dataset, collected by the European Central Bank, of detailed security holdings of European institutional sectors over a period of six years (2009-2015). Our approach outperforms the traditional CAPM and the recently proposed maximum-entropy CAPM both in reproducing the network topology and in estimating systemic risk due to fire sales spillovers. In general, ECAPM can be applied to the whole class of weighted bipartite networks described by the fitness model.

  12. Inferring monopartite projections of bipartite networks: an entropy-based approach

    Science.gov (United States)

    Saracco, Fabio; Straka, Mika J.; Di Clemente, Riccardo; Gabrielli, Andrea; Caldarelli, Guido; Squartini, Tiziano

    2017-05-01

    Bipartite networks are currently regarded as providing a major insight into the organization of many real-world systems, unveiling the mechanisms driving the interactions occurring between distinct groups of nodes. One of the most important issues encountered when modeling bipartite networks is devising a way to obtain a (monopartite) projection on the layer of interest, which preserves as much as possible the information encoded into the original bipartite structure. In the present paper we propose an algorithm to obtain statistically-validated projections of bipartite networks, according to which any two nodes sharing a statistically-significant number of neighbors are linked. Since assessing the statistical significance of nodes similarity requires a proper statistical benchmark, here we consider a set of four null models, defined within the exponential random graph framework. Our algorithm outputs a matrix of link-specific p-values, from which a validated projection is straightforwardly obtainable, upon running a multiple hypothesis testing procedure. Finally, we test our method on an economic network (i.e. the countries-products World Trade Web representation) and a social network (i.e. MovieLens, collecting the users’ ratings of a list of movies). In both cases non-trivial communities are detected: while projecting the World Trade Web on the countries layer reveals modules of similarly-industrialized nations, projecting it on the products layer allows communities characterized by an increasing level of complexity to be detected; in the second case, projecting MovieLens on the films layer allows clusters of movies whose affinity cannot be fully accounted for by genre similarity to be individuated.

  13. Bank-firm credit network in Japan: an analysis of a bipartite network.

    Science.gov (United States)

    Marotta, Luca; Miccichè, Salvatore; Fujiwara, Yoshi; Iyetomi, Hiroshi; Aoyama, Hideaki; Gallegati, Mauro; Mantegna, Rosario N

    2015-01-01

    We investigate the networked nature of the Japanese credit market. Our investigation is performed with tools of network science. In our investigation we perform community detection with an algorithm which is identifying communities composed of both banks and firms. We show that the communities obtained by directly working on the bipartite network carry information about the networked nature of the Japanese credit market. Our analysis is performed for each calendar year during the time period from 1980 to 2011. To investigate the time evolution of the networked structure of the credit market we introduce a new statistical method to track the time evolution of detected communities. We then characterize the time evolution of communities by detecting for each time evolving set of communities the over-expression of attributes of firms and banks. Specifically, we consider as attributes the economic sector and the geographical location of firms and the type of banks. In our 32-year-long analysis we detect a persistence of the over-expression of attributes of communities of banks and firms together with a slow dynamic of changes from some specific attributes to new ones. Our empirical observations show that the credit market in Japan is a networked market where the type of banks, geographical location of firms and banks, and economic sector of the firm play a role in shaping the credit relationships between banks and firms.

  14. Information Filtering via Clustering Coefficients of User-Object Bipartite Networks

    Science.gov (United States)

    Guo, Qiang; Leng, Rui; Shi, Kerui; Liu, Jian-Guo

    The clustering coefficient of user-object bipartite networks is presented to evaluate the overlap percentage of neighbors rating lists, which could be used to measure interest correlations among neighbor sets. The collaborative filtering (CF) information filtering algorithm evaluates a given user's interests in terms of his/her friends' opinions, which has become one of the most successful technologies for recommender systems. In this paper, different from the object clustering coefficient, users' clustering coefficients of user-object bipartite networks are introduced to improve the user similarity measurement. Numerical results for MovieLens and Netflix data sets show that users' clustering effects could enhance the algorithm performance. For MovieLens data set, the algorithmic accuracy, measured by the average ranking score, can be improved by 12.0% and the diversity could be improved by 18.2% and reach 0.649 when the recommendation list equals to 50. For Netflix data set, the accuracy could be improved by 14.5% at the optimal case and the popularity could be reduced by 13.4% comparing with the standard CF algorithm. Finally, we investigate the sparsity effect on the performance. This work indicates the user clustering coefficients is an effective factor to measure the user similarity, meanwhile statistical properties of user-object bipartite networks should be investigated to estimate users' tastes.

  15. Information Filtering via Heterogeneous Diffusion in Online Bipartite Networks.

    Science.gov (United States)

    Zhang, Fu-Guo; Zeng, An

    2015-01-01

    The rapid expansion of Internet brings us overwhelming online information, which is impossible for an individual to go through all of it. Therefore, recommender systems were created to help people dig through this abundance of information. In networks composed by users and objects, recommender algorithms based on diffusion have been proven to be one of the best performing methods. Previous works considered the diffusion process from user to object, and from object to user to be equivalent. We show in this work that it is not the case and we improve the quality of the recommendation by taking into account the asymmetrical nature of this process. We apply this idea to modify the state-of-the-art recommendation methods. The simulation results show that the new methods can outperform these existing methods in both recommendation accuracy and diversity. Finally, this modification is checked to be able to improve the recommendation in a realistic case.

  16. A mathematical model for generating bipartite graphs and its application to protein networks

    International Nuclear Information System (INIS)

    Nacher, J C; Ochiai, T; Hayashida, M; Akutsu, T

    2009-01-01

    Complex systems arise in many different contexts from large communication systems and transportation infrastructures to molecular biology. Most of these systems can be organized into networks composed of nodes and interacting edges. Here, we present a theoretical model that constructs bipartite networks with the particular feature that the degree distribution can be tuned depending on the probability rate of fundamental processes. We then use this model to investigate protein-domain networks. A protein can be composed of up to hundreds of domains. Each domain represents a conserved sequence segment with specific functional tasks. We analyze the distribution of domains in Homo sapiens and Arabidopsis thaliana organisms and the statistical analysis shows that while (a) the number of domain types shared by k proteins exhibits a power-law distribution, (b) the number of proteins composed of k types of domains decays as an exponential distribution. The proposed mathematical model generates bipartite graphs and predicts the emergence of this mixing of (a) power-law and (b) exponential distributions. Our theoretical and computational results show that this model requires (1) growth process and (2) copy mechanism.

  17. A mathematical model for generating bipartite graphs and its application to protein networks

    Energy Technology Data Exchange (ETDEWEB)

    Nacher, J C [Department of Complex Systems, Future University-Hakodate (Japan); Ochiai, T [Faculty of Engineering, Toyama Prefectural University (Japan); Hayashida, M; Akutsu, T [Bioinformatics Center, Institute for Chemical Research, Kyoto University (Japan)

    2009-12-04

    Complex systems arise in many different contexts from large communication systems and transportation infrastructures to molecular biology. Most of these systems can be organized into networks composed of nodes and interacting edges. Here, we present a theoretical model that constructs bipartite networks with the particular feature that the degree distribution can be tuned depending on the probability rate of fundamental processes. We then use this model to investigate protein-domain networks. A protein can be composed of up to hundreds of domains. Each domain represents a conserved sequence segment with specific functional tasks. We analyze the distribution of domains in Homo sapiens and Arabidopsis thaliana organisms and the statistical analysis shows that while (a) the number of domain types shared by k proteins exhibits a power-law distribution, (b) the number of proteins composed of k types of domains decays as an exponential distribution. The proposed mathematical model generates bipartite graphs and predicts the emergence of this mixing of (a) power-law and (b) exponential distributions. Our theoretical and computational results show that this model requires (1) growth process and (2) copy mechanism.

  18. Bipartite Networks of Universities and Companies: Recruiting New Graduates in Japan

    Science.gov (United States)

    Takahashi, Katsuhide; Kobayashi, Yuh; Kondo, Yohei; Takayasu, Hideki; Takayasu, Misako

    We investigated the bipartite Universities-Companies Network in Japan in terms of companies' recruitment of new graduates. In Japan, graduates of universities are typically hired by companies upon their graduation. To examine socially accepted ideas about this recruiting system, we combined different types of data on education, recruitment and corporate finance. The hypothesis that graduates from prestigious universities have the advantage of entering excellent companies was verified by examining the determinants of ratio of graduates entering top-ranked companies. Through hierarchical clustering, we obtained classification trees and observed the stability of their structure, as well as interesting changes corresponding to the business climate. We also calculated weighted HITS hub and authority values for each university and company and identified the links between the results of this analysis and those above. Finally, analysis of all the data indicated that excellent companies recruiting many graduates from prestigious universities do not necessarily show superb performance in profit-making and growth.

  19. A new algorithm based on bipartite graph networks for improving aggregate recommendation diversity

    Science.gov (United States)

    Ma, Lulu; Zhang, Jun

    2017-08-01

    Most of the traditional recommendation algorithms focus on the accuracy of recommendation results; however, the diversity of recommendation results is also important, which can be used to avoid the long-tail phenomenon. In this paper, a new algorithm for improving aggregate recommendation diversity is proposed. Firstly, a candidate recommendation list based on predictive scores is constructed; and then a bipartite graph network model is constructed. Secondly, item capacity is set to limit the number of recommendations of popular items. Finally, the final recommendation result is generated by combining the recommendation augmenting path. Based on the real world movie rating datasets, experiment results show that the proposed algorithm can effectively guarantee the accuracy of the recommendation results as well as improved the aggregate diversity of the recommendation.

  20. Dynamics of bloggers’ communities: Bipartite networks from empirical data and agent-based modeling

    Science.gov (United States)

    Mitrović, Marija; Tadić, Bosiljka

    2012-11-01

    We present an analysis of the empirical data and the agent-based modeling of the emotional behavior of users on the Web portals where the user interaction is mediated by posted comments, like Blogs and Diggs. We consider the dataset of discussion-driven popular Diggs, in which all comments are screened by machine-learning emotion detection in the text, to determine positive and negative valence (attractiveness and aversiveness) of each comment. By mapping the data onto a suitable bipartite network, we perform an analysis of the network topology and the related time-series of the emotional comments. The agent-based model is then introduced to simulate the dynamics and to capture the emergence of the emotional behaviors and communities. The agents are linked to posts on a bipartite network, whose structure evolves through their actions on the posts. The emotional states (arousal and valence) of each agent fluctuate in time, subject to the current contents of the posts to which the agent is exposed. By an agent’s action on a post its current emotions are transferred to the post. The model rules and the key parameters are inferred from the considered empirical data to ensure their realistic values and mutual consistency. The model assumes that the emotional arousal over posts drives the agent’s action. The simulations are preformed for the case of constant flux of agents and the results are analyzed in full analogy with the empirical data. The main conclusions are that the emotion-driven dynamics leads to long-range temporal correlations and emergent networks with community structure, that are comparable with the ones in the empirical system of popular posts. In view of pure emotion-driven agents actions, this type of comparisons provide a quantitative measure for the role of emotions in the dynamics on real blogs. Furthermore, the model reveals the underlying mechanisms which relate the post popularity with the emotion dynamics and the prevalence of negative

  1. Beyond ectomycorrhizal bipartite networks: projected networks demonstrate contrasted patterns between early- and late-successional plants in Corsica.

    Directory of Open Access Journals (Sweden)

    Adrien eTaudiere

    2015-10-01

    Full Text Available The ectomycorrhizal (ECM symbiosis connects mutualistic plants and fungal species into bipartite networks. While links between one focal ECM plant and its fungal symbionts have been widely documented, systemic views of ECM networks are lacking, in particular, concerning the ability of fungal species to mediate indirect ecological interactions between ECM plant species (projected-ECM networks. We assembled a large dataset of plant-fungi associations at the species level and at the scale of Corsica using molecular data and unambiguously host-assigned records to: (i examine the correlation between the number of fungal symbionts of a plant species and the average specialization of these fungal species, (ii explore the structure of the plant-plant projected network and (iii compare plant association patterns in regard to their position along the ecological succession. Our analysis reveals no trade-off between specialization of plants and specialization of their partners and a saturation of the plant projected network. Moreover, there is a significantly lower-than-expected sharing of partners between early- and late-successional plant species, with fewer fungal partners for early-successional ones and similar average specialization of symbionts of early- and late-successional plants. Our work paves the way for ecological readings of Mediterranean landscapes that include the astonishing diversity of below-ground interactions.

  2. Beyond ectomycorrhizal bipartite networks: projected networks demonstrate contrasted patterns between early- and late-successional plants in Corsica

    Science.gov (United States)

    Taudiere, Adrien; Munoz, François; Lesne, Annick; Monnet, Anne-Christine; Bellanger, Jean-Michel; Selosse, Marc-André; Moreau, Pierre-Arthur; Richard, Franck

    2015-01-01

    The ectomycorrhizal (ECM) symbiosis connects mutualistic plants and fungal species into bipartite networks. While links between one focal ECM plant and its fungal symbionts have been widely documented, systemic views of ECM networks are lacking, in particular, concerning the ability of fungal species to mediate indirect ecological interactions between ECM plant species (projected-ECM networks). We assembled a large dataset of plant–fungi associations at the species level and at the scale of Corsica using molecular data and unambiguously host-assigned records to: (i) examine the correlation between the number of fungal symbionts of a plant species and the average specialization of these fungal species, (ii) explore the structure of the plant–plant projected network and (iii) compare plant association patterns in regard to their position along the ecological succession. Our analysis reveals no trade-off between specialization of plants and specialization of their partners and a saturation of the plant projected network. Moreover, there is a significantly lower-than-expected sharing of partners between early- and late-successional plant species, with fewer fungal partners for early-successional ones and similar average specialization of symbionts of early- and late-successional plants. Our work paves the way for ecological readings of Mediterranean landscapes that include the astonishing diversity of below-ground interactions. PMID:26539201

  3. Bipartite networks improve understanding of effects of waterbody size and angling method on angler–fish interactions

    Science.gov (United States)

    Chizinski, Christopher J.; Martin, Dustin R.; Shizuka, Daizaburo; Pope, Kevin L.

    2018-01-01

    Networks used to study interactions could provide insights to fisheries. We compiled data from 27 297 interviews of anglers across waterbodies that ranged in size from 1 to 12 113 ha. Catch rates of fish species among anglers grouped by species targeted generally differed between angling methods (bank or boat). We constructed angler–catch bipartite networks (angling method specific) between anglers and fish and measured several network metrics. There was considerable variation in networks among waterbodies, with multiple metrics influenced by waterbody size. Number of species-targeting angler groups and number of fish species caught increased with increasing waterbody size. Mean number of links for species-targeting angler groups and fish species caught also increased with waterbody size. Connectance (realized proportion of possible links) of angler–catch interaction networks decreased slower for boat anglers than for bank anglers with increasing waterbody size. Network specialization (deviation of number of interactions from expected) was not significantly related to waterbody size or angling methods. Application of bipartite networks in fishery science requires careful interpretation of outputs, especially considering the numerous confounding factors prevalent in recreational fisheries.

  4. Multiple Substrate Usage of Coxiella burnetii to Feed a Bipartite Metabolic Network

    Directory of Open Access Journals (Sweden)

    Ina Häuslein

    2017-06-01

    Full Text Available The human pathogen Coxiella burnetii causes Q-fever and is classified as a category B bio-weapon. Exploiting the development of the axenic growth medium ACCM-2, we have now used 13C-labeling experiments and isotopolog profiling to investigate the highly diverse metabolic network of C. burnetii. To this aim, C. burnetii RSA 439 NMII was cultured in ACCM-2 containing 5 mM of either [U-13C3]serine, [U-13C6]glucose, or [U-13C3]glycerol until the late-logarithmic phase. GC/MS-based isotopolog profiling of protein-derived amino acids, methanol-soluble polar metabolites, fatty acids, and cell wall components (e.g., diaminopimelate and sugars from the labeled bacteria revealed differential incorporation rates and isotopolog profiles. These data served to decipher the diverse usages of the labeled substrates and the relative carbon fluxes into the core metabolism of the pathogen. Whereas, de novo biosynthesis from any of these substrates could not be found for histidine, isoleucine, leucine, lysine, phenylalanine, proline and valine, the other amino acids and metabolites under study acquired 13C-label at specific rates depending on the nature of the tracer compound. Glucose was directly used for cell wall biosynthesis, but was also converted into pyruvate (and its downstream metabolites through the glycolytic pathway or into erythrose 4-phosphate (e.g., for the biosynthesis of tyrosine via the non-oxidative pentose phosphate pathway. Glycerol efficiently served as a gluconeogenetic substrate and could also be used via phosphoenolpyruvate and diaminopimelate as a major carbon source for cell wall biosynthesis. In contrast, exogenous serine was mainly utilized in downstream metabolic processes, e.g., via acetyl-CoA in a complete citrate cycle with fluxes in the oxidative direction and as a carbon feed for fatty acid biosynthesis. In summary, the data reflect multiple and differential substrate usages by C. burnetii in a bipartite-type metabolic network

  5. AMBIENT: Active Modules for Bipartite Networks--using high-throughput transcriptomic data to dissect metabolic response.

    Science.gov (United States)

    Bryant, William A; Sternberg, Michael J E; Pinney, John W

    2013-03-25

    With the continued proliferation of high-throughput biological experiments, there is a pressing need for tools to integrate the data produced in ways that produce biologically meaningful conclusions. Many microarray studies have analysed transcriptomic data from a pathway perspective, for instance by testing for KEGG pathway enrichment in sets of upregulated genes. However, the increasing availability of species-specific metabolic models provides the opportunity to analyse these data in a more objective, system-wide manner. Here we introduce ambient (Active Modules for Bipartite Networks), a simulated annealing approach to the discovery of metabolic subnetworks (modules) that are significantly affected by a given genetic or environmental change. The metabolic modules returned by ambient are connected parts of the bipartite network that change coherently between conditions, providing a more detailed view of metabolic changes than standard approaches based on pathway enrichment. ambient is an effective and flexible tool for the analysis of high-throughput data in a metabolic context. The same approach can be applied to any system in which reactions (or metabolites) can be assigned a score based on some biological observation, without the limitation of predefined pathways. A Python implementation of ambient is available at http://www.theosysbio.bio.ic.ac.uk/ambient.

  6. Identifying the Gene Signatures from Gene-Pathway Bipartite Network Guarantees the Robust Model Performance on Predicting the Cancer Prognosis

    Directory of Open Access Journals (Sweden)

    Li He

    2014-01-01

    Full Text Available For the purpose of improving the prediction of cancer prognosis in the clinical researches, various algorithms have been developed to construct the predictive models with the gene signatures detected by DNA microarrays. Due to the heterogeneity of the clinical samples, the list of differentially expressed genes (DEGs generated by the statistical methods or the machine learning algorithms often involves a number of false positive genes, which are not associated with the phenotypic differences between the compared clinical conditions, and subsequently impacts the reliability of the predictive models. In this study, we proposed a strategy, which combined the statistical algorithm with the gene-pathway bipartite networks, to generate the reliable lists of cancer-related DEGs and constructed the models by using support vector machine for predicting the prognosis of three types of cancers, namely, breast cancer, acute myeloma leukemia, and glioblastoma. Our results demonstrated that, combined with the gene-pathway bipartite networks, our proposed strategy can efficiently generate the reliable cancer-related DEG lists for constructing the predictive models. In addition, the model performance in the swap analysis was similar to that in the original analysis, indicating the robustness of the models in predicting the cancer outcomes.

  7. A Bipartite Network-based Method for Prediction of Long Non-coding RNA–protein Interactions

    Directory of Open Access Journals (Sweden)

    Mengqu Ge

    2016-02-01

    Full Text Available As one large class of non-coding RNAs (ncRNAs, long ncRNAs (lncRNAs have gained considerable attention in recent years. Mutations and dysfunction of lncRNAs have been implicated in human disorders. Many lncRNAs exert their effects through interactions with the corresponding RNA-binding proteins. Several computational approaches have been developed, but only few are able to perform the prediction of these interactions from a network-based point of view. Here, we introduce a computational method named lncRNA–protein bipartite network inference (LPBNI. LPBNI aims to identify potential lncRNA–interacting proteins, by making full use of the known lncRNA–protein interactions. Leave-one-out cross validation (LOOCV test shows that LPBNI significantly outperforms other network-based methods, including random walk (RWR and protein-based collaborative filtering (ProCF. Furthermore, a case study was performed to demonstrate the performance of LPBNI using real data in predicting potential lncRNA–interacting proteins.

  8. Enhanced capital-asset pricing model for the reconstruction of bipartite financial networks

    NARCIS (Netherlands)

    Squartini, Tiziano; Almog, Assaf; Caldarelli, Guido; Van Lelyveld, Iman; Garlaschelli, Diego; Cimini, Giulio

    2017-01-01

    Reconstructing patterns of interconnections from partial information is one of the most important issues in the statistical physics of complex networks. A paramount example is provided by financial networks. In fact, the spreading and amplification of financial distress in capital markets are

  9. Improving the recommender algorithms with the detected communities in bipartite networks

    Science.gov (United States)

    Zhang, Peng; Wang, Duo; Xiao, Jinghua

    2017-04-01

    Recommender system offers a powerful tool to make information overload problem well solved and thus gains wide concerns of scholars and engineers. A key challenge is how to make recommendations more accurate and personalized. We notice that community structures widely exist in many real networks, which could significantly affect the recommendation results. By incorporating the information of detected communities in the recommendation algorithms, an improved recommendation approach for the networks with communities is proposed. The approach is examined in both artificial and real networks, the results show that the improvement on accuracy and diversity can be 20% and 7%, respectively. This reveals that it is beneficial to classify the nodes based on the inherent properties in recommender systems.

  10. FALCON: a software package for analysis of nestedness in bipartite networks [v1; ref status: indexed, http://f1000r.es/3z8

    Directory of Open Access Journals (Sweden)

    Stephen J. Beckett

    2014-08-01

    Full Text Available Nestedness is a statistical measure used to interpret bipartite interaction data in several ecological and evolutionary contexts, e.g. biogeography (species-site relationships and species interactions (plant-pollinator and host-parasite networks. Multiple methods have been used to evaluate nestedness, which differ in how the metrics for nestedness are determined. Furthermore, several different null models have been used to calculate statistical significance of nestedness scores. The profusion of measures and null models, many of which give conflicting results, is problematic for comparison of nestedness across different studies. We developed the FALCON software package to allow easy and efficient comparison of nestedness scores and statistical significances for a given input network, using a selection of the more popular measures and null models from the current literature. FALCON currently includes six measures and five null models for nestedness in binary networks, and two measures and four null models for nestedness in weighted networks. The FALCON software is designed to be efficient and easy to use. FALCON code is offered in three languages (R, MATLAB, Octave and is designed to be modular and extensible, enabling users to easily expand its functionality by adding further measures and null models. FALCON provides a robust methodology for comparing the strength and significance of nestedness in a given bipartite network using multiple measures and null models. It includes an “adaptive ensemble” method to reduce undersampling of the null distribution when calculating statistical significance. It can work with binary or weighted input networks. FALCON is a response to the proliferation of different nestedness measures and associated null models in the literature. It allows easy and efficient calculation of nestedness scores and statistical significances using different methods, enabling comparison of results from

  11. Bipartite binomial heaps

    DEFF Research Database (Denmark)

    Elmasry, Amr; Jensen, Claus; Katajainen, Jyrki

    2017-01-01

    the (total) number of elements stored in the data structure(s) prior to the operation. As the resulting data structure consists of two components that are different variants of binomial heaps, we call it a bipartite binomial heap. Compared to its counterpart, a multipartite binomial heap, the new structure...

  12. MRI findings in bipartite patella

    Energy Technology Data Exchange (ETDEWEB)

    Kavanagh, Eoin C. [University of Pittsburgh Medical Centre, Department of Radiology, Pittsburgh, PA (United States); Zoga, Adam; Omar, Imran [Thomas Jefferson University Hospital, Department of Radiology, Philadelphia, PA (United States); Ford, Stephanie; Eustace, Stephen [Cappagh National Orthopaedic Hospital, Department of Radiology, Dublin (Ireland); Schweitzer, Mark [Hospital for Joint Disease, Orthopedic Institute, Department of Radiology, New York, NY (United States)

    2007-03-15

    Bipartite patella is a known cause of anterior knee pain. Our purpose was to detail the magnetic resonance imaging (MRI) features of bipartite patella in a retrospective cohort of patients imaged at our institution. MRI exams from 53 patients with findings of bipartite patella were evaluated to assess for the presence of bone marrow edema within the bipartite fragment and for the presence of abnormal signal across the synchondrosis or pseudarthrosis. Any other significant knee pathology seen at MRI was also recorded. We also reviewed 400 consecutive knee MRI studies to determine the MRI prevalence of bipartite patella. Of the 53 patients with bipartite patella 40 (75%) were male; 35 (66%) had edema within the bipartite fragment. Of the 18 with no edema an alternative explanation for knee pain was found in 13 (72%). Edema within the bipartite fragment was the sole finding in 26 of 53 (49%) patients. Bipartite patella was seen in 3 (0.7%) of 400 patients. In patients with bipartite patella at knee MRI, bone marrow edema within the bipartite fragment was the sole finding on knee MRI in almost half of the patients in our series. (orig.)

  13. Ranking stability and super-stable nodes in complex networks.

    Science.gov (United States)

    Ghoshal, Gourab; Barabási, Albert-László

    2011-07-19

    Pagerank, a network-based diffusion algorithm, has emerged as the leading method to rank web content, ecological species and even scientists. Despite its wide use, it remains unknown how the structure of the network on which it operates affects its performance. Here we show that for random networks the ranking provided by pagerank is sensitive to perturbations in the network topology, making it unreliable for incomplete or noisy systems. In contrast, in scale-free networks we predict analytically the emergence of super-stable nodes whose ranking is exceptionally stable to perturbations. We calculate the dependence of the number of super-stable nodes on network characteristics and demonstrate their presence in real networks, in agreement with the analytical predictions. These results not only deepen our understanding of the interplay between network topology and dynamical processes but also have implications in all areas where ranking has a role, from science to marketing.

  14. Bipartite Toughness and k-Factors in Bipartite Graphs

    Directory of Open Access Journals (Sweden)

    Guizhen Liu

    2008-01-01

    Full Text Available We define a new invariant tB(G in bipartite graphs that is analogous to the toughness t(G and we give sufficient conditions in term of tB(G for the existence of k-factors in bipartite graphs. We also show that these results are sharp.

  15. Stable architectures for deep neural networks

    Science.gov (United States)

    Haber, Eldad; Ruthotto, Lars

    2018-01-01

    Deep neural networks have become invaluable tools for supervised machine learning, e.g. classification of text or images. While often offering superior results over traditional techniques and successfully expressing complicated patterns in data, deep architectures are known to be challenging to design and train such that they generalize well to new data. Critical issues with deep architectures are numerical instabilities in derivative-based learning algorithms commonly called exploding or vanishing gradients. In this paper, we propose new forward propagation techniques inspired by systems of ordinary differential equations (ODE) that overcome this challenge and lead to well-posed learning problems for arbitrarily deep networks. The backbone of our approach is our interpretation of deep learning as a parameter estimation problem of nonlinear dynamical systems. Given this formulation, we analyze stability and well-posedness of deep learning and use this new understanding to develop new network architectures. We relate the exploding and vanishing gradient phenomenon to the stability of the discrete ODE and present several strategies for stabilizing deep learning for very deep networks. While our new architectures restrict the solution space, several numerical experiments show their competitiveness with state-of-the-art networks.

  16. Bipartite and Multipartite Entanglement of Gaussian States

    Science.gov (United States)

    Adesso, Gerardo; Illuminati, Fabrizio

    In this chapter we review the characterization of entanglement in Gaussian states of continuous variable systems. For two-mode Gaussian states, we discuss how their bipartite entanglement can be accurately quantified in terms of the global and local amounts of mixedness, and efficiently estimated by direct measurements of the associated purities. For multimode Gaussian states endowed with local symmetry with respect to a given bipartition, we show how the multimode block entanglement can be completely and reversibly localized onto a single pair of modes by local, unitary operations. We then analyze the distribution of entanglement among multiple parties in multimode Gaussian states. We introduce the continuous-variable tangle to quantify entanglement sharing in Gaussian states and we prove that it satisfies the Coffman-Kundu-Wootters monogamy inequality. Nevertheless, we show that pure, symmetric three-mode Gaussian states, at variance with their discrete-variable counterparts, allow a promiscuous sharing of quantum correlations, exhibiting both maximum tripartite residual entanglement and maximum couplewise entanglement between any pair of modes. Finally, we investigate the connection between multipartite entanglement and the optimal fidelity in a continuous-variable quantum teleportation network. We show how the fidelity can be maximized in terms of the best preparation of the shared entangled resources and, viceversa, that this optimal fidelity provides a clearcut operational interpretation of several measures of bipartite and multipartite entanglement, including the entanglement of formation, the localizable entanglement, and the continuous-variable tangle.

  17. Localization in random bipartite graphs: Numerical and empirical study

    Science.gov (United States)

    Slanina, František

    2017-05-01

    We investigate adjacency matrices of bipartite graphs with a power-law degree distribution. Motivation for this study is twofold: first, vibrational states in granular matter and jammed sphere packings; second, graphs encoding social interaction, especially electronic commerce. We establish the position of the mobility edge and show that it strongly depends on the power in the degree distribution and on the ratio of the sizes of the two parts of the bipartite graph. At the jamming threshold, where the two parts have the same size, localization vanishes. We found that the multifractal spectrum is nontrivial in the delocalized phase, but still near the mobility edge. We also study an empirical bipartite graph, namely, the Amazon reviewer-item network. We found that in this specific graph the mobility edge disappears, and we draw a conclusion from this fact regarding earlier empirical studies of the Amazon network.

  18. A bipartite fitness model for online music streaming services

    Science.gov (United States)

    Pongnumkul, Suchit; Motohashi, Kazuyuki

    2018-01-01

    This paper proposes an evolution model and an analysis of the behavior of music consumers on online music streaming services. While previous studies have observed power-law degree distributions of usage in online music streaming services, the underlying behavior of users has not been well understood. Users and songs can be described using a bipartite network where an edge exists between a user node and a song node when the user has listened that song. The growth mechanism of bipartite networks has been used to understand the evolution of online bipartite networks Zhang et al. (2013). Existing bipartite models are based on a preferential attachment mechanism László Barabási and Albert (1999) in which the probability that a user listens to a song is proportional to its current popularity. This mechanism does not allow for two types of real world phenomena. First, a newly released song with high quality sometimes quickly gains popularity. Second, the popularity of songs normally decreases as time goes by. Therefore, this paper proposes a new model that is more suitable for online music services by adding fitness and aging functions to the song nodes of the bipartite network proposed by Zhang et al. (2013). Theoretical analyses are performed for the degree distribution of songs. Empirical data from an online streaming service, Last.fm, are used to confirm the degree distribution of the object nodes. Simulation results show improvements from a previous model. Finally, to illustrate the application of the proposed model, a simplified royalty cost model for online music services is used to demonstrate how the changes in the proposed parameters can affect the costs for online music streaming providers. Managerial implications are also discussed.

  19. Complexity of Products of Some Complete and Complete Bipartite Graphs

    Directory of Open Access Journals (Sweden)

    S. N. Daoud

    2013-01-01

    Full Text Available The number of spanning trees in graphs (networks is an important invariant; it is also an important measure of reliability of a network. In this paper, we derive simple formulas of the complexity, number of spanning trees, of products of some complete and complete bipartite graphs such as cartesian product, normal product, composition product, tensor product, and symmetric product, using linear algebra and matrix analysis techniques.

  20. Emergent bipartiteness in a society of knights and knaves

    International Nuclear Information System (INIS)

    Del Genio, C I; Gross, T

    2011-01-01

    We propose a simple model of a social network based on the so-called knights-and-knaves puzzles. The model describes the formation of networks between two classes of agents where links are formed by agents introducing their neighbors to others of their own class. We show that if the proportion of knights and knaves is within a certain range, the network self-organizes to a perfectly bipartite state. However, if the excess of one of the two classes is greater than a threshold value, bipartiteness is not observed. We offer a detailed theoretical analysis of the behavior of the model, investigate its behavior in the thermodynamic limit and argue that it provides a simple example of a topology-driven model whose behavior is strongly reminiscent of first-order phase transitions far from equilibrium. (paper)

  1. Bone-scintigraphy in painful bipartite patella

    Energy Technology Data Exchange (ETDEWEB)

    Iossifidis, A. [Orthopaedic Academic Unit, St. Thomas` Hospital, London (United Kingdom); Brueton, R.N. [Orthopaedic Academic Unit, St. Thomas` Hospital, London (United Kingdom); Nunan, T.O. [Dept. of Nuclear Medicine, St. Thomas` Hospital, London (United Kingdom)

    1995-10-01

    Although, the use of technetium scintigraphy in the assessment of anterior knee pain has been described, no reference has been made to the scintigraphic appearances of painful bipartite patella. We report the scintigraphic-appearances of painful bipartite patella in 25-year-old man a 2 1/2 years history of unexplained patellar pain. Painful bipartite patella is a rare cause of chronic post-traumatic patellar pain. Bone scintigraphy, by demonstrating increased uptake by the painful accessory bipartite fragment, appears to be an imaging method of choice in the diagnosis of this condition. (orig./MG)

  2. Stable functional networks exhibit consistent timing in the human brain.

    Science.gov (United States)

    Chapeton, Julio I; Inati, Sara K; Zaghloul, Kareem A

    2017-03-01

    Despite many advances in the study of large-scale human functional networks, the question of timing, stability, and direction of communication between cortical regions has not been fully addressed. At the cellular level, neuronal communication occurs through axons and dendrites, and the time required for such communication is well defined and preserved. At larger spatial scales, however, the relationship between timing, direction, and communication between brain regions is less clear. Here, we use a measure of effective connectivity to identify connections between brain regions that exhibit communication with consistent timing. We hypothesized that if two brain regions are communicating, then knowledge of the activity in one region should allow an external observer to better predict activity in the other region, and that such communication involves a consistent time delay. We examine this question using intracranial electroencephalography captured from nine human participants with medically refractory epilepsy. We use a coupling measure based on time-lagged mutual information to identify effective connections between brain regions that exhibit a statistically significant increase in average mutual information at a consistent time delay. These identified connections result in sparse, directed functional networks that are stable over minutes, hours, and days. Notably, the time delays associated with these connections are also highly preserved over multiple time scales. We characterize the anatomic locations of these connections, and find that the propagation of activity exhibits a preferred posterior to anterior temporal lobe direction, consistent across participants. Moreover, networks constructed from connections that reliably exhibit consistent timing between anatomic regions demonstrate features of a small-world architecture, with many reliable connections between anatomically neighbouring regions and few long range connections. Together, our results demonstrate

  3. Bipartite consensus for multi-agent systems with antagonistic interactions and communication delays

    Science.gov (United States)

    Guo, Xing; Lu, Jianquan; Alsaedi, Ahmed; Alsaadi, Fuad E.

    2018-04-01

    This paper studies the consensus problems over signed digraphs with arbitrary finite communication delays. For the considered system, the information flow is directed and only locally delayed information can be used for each node. We derive that bipartite consensus of this system can be realized when the associated signed digraph is strongly connected. Furthermore, for structurally balanced networks, this paper studies the pinning partite consensus for the considered system. we design a pinning scheme to pin any one agent in the signed network, and obtain that the network achieves pinning bipartite consensus with any initial conditions. Finally, two examples are provided to demonstrate the effectiveness of our main results.

  4. A bipartite graph of Neuroendocrine System

    Science.gov (United States)

    Guo, Zhong-Wei; Zou, Sheng-Rong; Peng, Yu-Jing; Zhou, Ta; Gu, Chang-Gui; He, Da-Ren

    2008-03-01

    We present an empirical investigation on the neuroendocrine system and suggest describe it by a bipartite graph. In the net the cells can be regarded as collaboration acts and the mediators can be regarded as collaboration actors. The act degree stands for the number of the cells that secrete a single mediator. Among them bFGF (the basic fibroblast growth factor) has the largest node act degree. It is the most important mitogenic cytokine, followed by TGF-beta, IL-6, IL1-beta, VEGF, IGF-1and so on. They are critical in neuroendocrine system to maintain bodily healthiness, emotional stabilization and endocrine harmony. The act degree distribution shows a shifted power law (SPL) function forms [1]. The average act degree of neuroendocrine network is h=3.01, It means that each mediator is secreted by three cells on average. The similarity, which stands for the average probability of secreting the same mediators by all neuroendocrine cells, is observed as s=0.14. Our results may be used in the research of the medical treatment of neuroendocrine diseases. [1] Assortativity and act degree distribution of some collaboration networks, Hui Chang, Bei-Bei Su, Yue-Ping Zhou, Daren He, Physica A, 383 (2007) 687-702

  5. 3-biplacement of bipartite graphs

    Directory of Open Access Journals (Sweden)

    Lech Adamus

    2008-01-01

    Full Text Available Let \\(G=(L,R;E\\ be a bipartite graph with color classes \\(L\\ and \\(R\\ and edge set \\(E\\. A set of two bijections \\(\\{\\varphi_1 , \\varphi_2\\}\\, \\(\\varphi_1 , \\varphi_2 :L \\cup R \\to L \\cup R\\, is said to be a \\(3\\-biplacement of \\(G\\ if \\(\\varphi_1(L= \\varphi_2(L = L\\ and \\(E \\cap \\varphi_1^*(E=\\emptyset\\, \\(E \\cap \\varphi_2^*(E=\\emptyset\\, \\(\\varphi_1^*(E \\cap \\varphi_2^*(E=\\emptyset\\, where \\(\\varphi_1^*\\, \\(\\varphi_2^*\\ are the maps defined on \\(E\\, induced by \\(\\varphi_1\\, \\(\\varphi_2\\, respectively. We prove that if \\(|L| = p\\, \\(|R| = q\\, \\(3 \\leq p \\leq q\\, then every graph \\(G=(L,R;E\\ of size at most \\(p\\ has a \\(3\\-biplacement.

  6. Separable decompositions of bipartite mixed states

    Science.gov (United States)

    Li, Jun-Li; Qiao, Cong-Feng

    2018-04-01

    We present a practical scheme for the decomposition of a bipartite mixed state into a sum of direct products of local density matrices, using the technique developed in Li and Qiao (Sci. Rep. 8:1442, 2018). In the scheme, the correlation matrix which characterizes the bipartite entanglement is first decomposed into two matrices composed of the Bloch vectors of local states. Then, we show that the symmetries of Bloch vectors are consistent with that of the correlation matrix, and the magnitudes of the local Bloch vectors are lower bounded by the correlation matrix. Concrete examples for the separable decompositions of bipartite mixed states are presented for illustration.

  7. Bipartite Bell Inequality and Maximal Violation

    International Nuclear Information System (INIS)

    Li Ming; Fei Shaoming; Li-Jost Xian-Qing

    2011-01-01

    We present new bell inequalities for arbitrary dimensional bipartite quantum systems. The maximal violation of the inequalities is computed. The Bell inequality is capable of detecting quantum entanglement of both pure and mixed quantum states more effectively. (general)

  8. Data transfer using complete bipartite graph

    Science.gov (United States)

    Chandrasekaran, V. M.; Praba, B.; Manimaran, A.; Kailash, G.

    2017-11-01

    Information exchange extent is an estimation of the amount of information sent between two focuses on a framework in a given time period. It is an extremely significant perception in present world. There are many ways of message passing in the present situations. Some of them are through encryption, decryption, by using complete bipartite graph. In this paper, we recommend a method for communication using messages through encryption of a complete bipartite graph.

  9. Tau can switch microtubule network organizations: from random networks to dynamic and stable bundles.

    Science.gov (United States)

    Prezel, Elea; Elie, Auréliane; Delaroche, Julie; Stoppin-Mellet, Virginie; Bosc, Christophe; Serre, Laurence; Fourest-Lieuvin, Anne; Andrieux, Annie; Vantard, Marylin; Arnal, Isabelle

    2018-01-15

    In neurons, microtubule networks alternate between single filaments and bundled arrays under the influence of effectors controlling their dynamics and organization. Tau is a microtubule bundler that stabilizes microtubules by stimulating growth and inhibiting shrinkage. The mechanisms by which tau organizes microtubule networks remain poorly understood. Here, we studied the self-organization of microtubules growing in the presence of tau isoforms and mutants. The results show that tau's ability to induce stable microtubule bundles requires two hexapeptides located in its microtubule-binding domain and is modulated by its projection domain. Site-specific pseudophosphorylation of tau promotes distinct microtubule organizations: stable single microtubules, stable bundles, or dynamic bundles. Disease-related tau mutations increase the formation of highly dynamic bundles. Finally, cryo-electron microscopy experiments indicate that tau and its variants similarly change the microtubule lattice structure by increasing both the protofilament number and lattice defects. Overall, our results uncover novel phosphodependent mechanisms governing tau's ability to trigger microtubule organization and reveal that disease-related modifications of tau promote specific microtubule organizations that may have a deleterious impact during neurodegeneration. © 2018 Prezel, Elie, et al. This article is distributed by The American Society for Cell Biology under license from the author(s). Two months after publication it is available to the public under an Attribution–Noncommercial–Share Alike 3.0 Unported Creative Commons License (http://creativecommons.org/licenses/by-nc-sa/3.0).

  10. Anderson localization in bipartite lattices

    International Nuclear Information System (INIS)

    Fabrizio, Michele; Castellani, Claudio

    2000-01-01

    We study the localization properties of a disordered tight-binding Hamiltonian on a generic bipartite lattice close to the band center. By means of a fermionic replica trick method, we derive the effective non-linear σ-model describing the diffusive modes, which we analyse by using the Wilson-Polyakov renormalization group. In addition to the standard parameters which define the non-linear σ-model, namely, the conductance and the external frequency, a new parameter enters, which may be related to the fluctuations of the staggered density of states. We find that, when both the regular hopping and the disorder only couple one sublattice to the other, the quantum corrections to the Kubo conductivity vanish at the band center, thus implying the existence of delocalized states. In two dimensions, the RG equations predict that the conductance flows to a finite value, while both the density of states and the staggered density of states fluctuations diverge. In three dimensions, we find that, sufficiently close to the band center, all states are extended, independently of the disorder strength. We also discuss the role of various symmetry breaking terms, as a regular hopping between same sublattices, or an on-site disorder

  11. Anderson localization in bipartite lattices

    International Nuclear Information System (INIS)

    Fabrizio, M.; Castellani, C.

    2000-04-01

    We study the localization properties of a disordered tight-binding Hamiltonian on a generic bipartite lattice close to the band center. By means of a fermionic replica trick method, we derive the effective non-linear σ-model describing the diffusive modes, which we analyse by using the Wilson-Polyakov renormalization group. In addition to the standard parameters which define the non-linear σ-model, namely the conductance and the external frequency, a new parameter enters, which may be related to the fluctuations of the staggered density of states. We find that, when both the regular hopping and the disorder only couple one sublattice to the other, the quantum corrections to the Kubo conductivity vanish at the band center, thus implying the existence of delocalized states. In two dimensions, the RG equations predict that the conductance flows to a finite value, while both the density of states and the staggered density of states fluctuations diverge. In three dimensions, we find that, sufficiently close to the band center, all states are extended, independently of the disorder strength. We also discuss the role of various symmetry breaking terms, as a regular hopping between same sublattices, or an on-site disorder. (author)

  12. Bipartite graph partitioning and data clustering

    Energy Technology Data Exchange (ETDEWEB)

    Zha, Hongyuan; He, Xiaofeng; Ding, Chris; Gu, Ming; Simon, Horst D.

    2001-05-07

    Many data types arising from data mining applications can be modeled as bipartite graphs, examples include terms and documents in a text corpus, customers and purchasing items in market basket analysis and reviewers and movies in a movie recommender system. In this paper, the authors propose a new data clustering method based on partitioning the underlying biopartite graph. The partition is constructed by minimizing a normalized sum of edge weights between unmatched pairs of vertices of the bipartite graph. They show that an approximate solution to the minimization problem can be obtained by computing a partial singular value decomposition (SVD) of the associated edge weight matrix of the bipartite graph. They point out the connection of their clustering algorithm to correspondence analysis used in multivariate analysis. They also briefly discuss the issue of assigning data objects to multiple clusters. In the experimental results, they apply their clustering algorithm to the problem of document clustering to illustrate its effectiveness and efficiency.

  13. Channel discrimination power of bipartite quantum states

    Science.gov (United States)

    Caiaffa, Matteo; Piani, Marco

    2018-03-01

    We quantify the usefulness of a bipartite quantum state in the ancilla-assisted channel discrimination of arbitrary quantum channels, formally defining a worst-case-scenario channel discrimination power for bipartite quantum states. We show that such a quantifier is deeply connected with the operator Schmidt decomposition of the state. We compute the channel discrimination power exactly for pure states, and provide upper and lower bounds for general mixed states. We show that highly entangled states can outperform any state that passes the realignment criterion for separability and that the channel discrimination power of a state is bounded by its quantum discord.

  14. A Stable TORA Based for Routing in Mobile Ad Ηoc Networks

    Directory of Open Access Journals (Sweden)

    S. Jahanbakhsh Gudakahriz

    2018-02-01

    Full Text Available A mobile ad hoc network (MANET is defined as a set of mobile nodes which communicate through wireless links with no central infrastructure. In these networks nodes are always moving and could enter to or exit from the network at any time. Therefore, network topology is completely dynamic. Another characteristic of these networks is the low node energy level, resulting from inherent node limitations. Stable routing is one method to face routing challenges in mobile ad hoc networks. The objective of this study is to stabilize TORA protocol which is a distributed routing protocol, with high adaptation, efficiency, and suitability for large and dense mobile ad hoc networks and thus to provide a new high efficiency protocol. The proposed protocol introduced as Stable-TORA has been compared with base protocol TORA in different scenarios via NS-2 simulator environment and its efficiency is evaluated.

  15. Hardening Software Defined Networks

    Science.gov (United States)

    2014-07-01

    the layers to act upon each other in very distinct ways. Examining the literature, we selected bipartite and tripartite network models are those...identify characteristics of multilayered networks . Bipartite and tripartite models are potentially most promising (and somewhat underutilized) in the... tripartite models are particularly well-suited to a confluence of traditional networks and software defined networks where SDN components are

  16. Eigenvalues and expansion of bipartite graphs

    DEFF Research Database (Denmark)

    Høholdt, Tom; Janwa, Heeralal

    2012-01-01

    We prove lower bounds on the largest and second largest eigenvalue of the adjacency matrix of bipartite graphs and give necessary and sufficient conditions for equality. We give several examples of classes that are optimal with respect to the bouns. We prove that BIBD-graphs are characterized by ...

  17. Relativistic quantum correlations in bipartite fermionic states

    Indian Academy of Sciences (India)

    2016-09-21

    Sep 21, 2016 ... Relativistic quantum correlations in bipartite fermionic states. S KHAN1,∗ and N A KHAN2. 1Department of Physics, COMSATS Institute of Information Technology, Park Road, Tarlai Kalan 45550,. Islamabad, Pakistan. 2CFP and Departamento de Física, Faculdade de Ciências, Universidade do Porto, ...

  18. Universality in bipartite mean field spin glasses

    Science.gov (United States)

    Genovese, Giuseppe

    2012-12-01

    In this work, we give a proof of universality with respect to the choice of the statistical distribution of the quenched noise, for mean field bipartite spin glasses. We use mainly techniques of spin glasses theory, as Guerra's interpolation and the cavity approach.

  19. Relativistic quantum correlations in bipartite fermionic states

    Indian Academy of Sciences (India)

    The influences of relative motion, the size of the wave packet and the average momentum of the particles on different types of correlations present in bipartite quantum states are investigated. In particular, the dynamics of the quantum mutual information, the classical correlation and the quantum discord on the ...

  20. Spatial-Frequency Azimuthally Stable Cartography of Biological Polycrystalline Networks

    Directory of Open Access Journals (Sweden)

    V. A. Ushenko

    2013-01-01

    Full Text Available A new azimuthally stable polarimetric technique processing microscopic images of optically anisotropic structures of biological tissues histological sections is proposed. It has been used as a generalized model of phase anisotropy definition of biological tissues by using superposition of Mueller matrices of linear birefringence and optical activity. The matrix element M44 has been chosen as the main information parameter, whose value is independent of the rotation angle of both sample and probing beam polarization plane. For the first time, the technique of concerted spatial-frequency filtration has been used in order to separate the manifestation of linear birefringence and optical activity. Thereupon, the method of azimuthally stable spatial-frequency cartography of biological tissues histological sections has been elaborated. As the analyzing tool, complex statistic, correlation, and fractal analysis of coordinate distributions of M44 element has been performed. The possibility of using the biopsy of the uterine wall tissue in order to differentiate benign (fibromyoma and malignant (adenocarcinoma conditions has been estimated.

  1. Bipartite and tripartite entanglement of truncated harmonic oscillator coherent states via beam splitters

    Science.gov (United States)

    Daoud, M.; Jellal, A.; Choubabi, E. B.; El Kinani, E. H.

    2011-08-01

    We introduce a special class of truncated Weyl-Heisenberg algebra and discuss the corresponding Hilbertian and analytical representations. Subsequently, we study the effect of a quantum network of beam splitting on coherent states of this nonlinear class of harmonic oscillators. We particularly focus on quantum networks involving one and two beam splitters and examine the degree of bipartite as well as tripartite entanglement using the linear entropy.

  2. Bipartite and Tripartite Entanglement of Truncated Harmonic Oscillator Coherent States via Beam Splitters

    OpenAIRE

    Daoud, M.; Jellal, A.; Choubabi, E. B.; Kinani, E. H. El

    2012-01-01

    We introduce a special class of truncated Weyl-Heisenberg algebra and discuss the corresponding Hilbertian and analytical representations. Subsequently, we study the effect of a quantum network of beam splitting on coherent states of this nonlinear class of harmonic oscillators. We particularly focus on quantum networks involving one and two beam splitters and examine the degree of bipartite as well as tripartite entanglement using the linear entropy.

  3. Effects of diffusion in competitive contact processes on bipartite lattices

    Science.gov (United States)

    de Oliveira, M. M.; Fiore, C. E.

    2017-05-01

    We investigate the influence of particle diffusion in the two-dimension contact process (CP) with a competitive dynamics in bipartite sublattices, proposed in de Oliveira and Dickman (2011 Phys. Rev. E 84 011125). The particle creation depends on its first and second neighbors and the extinction increases according to the local density. In contrast to the standard CP model, mean-field theory and numerical simulations predict three stable phases: inactive (absorbing), active symmetric and active asymmetric, signed by distinct sublattice particle occupations. Our results from MFT and Monte Carlo simulations reveal that low diffusion rates do not destroy sublattice ordering, ensuring the maintenance of the asymmetric phase. On the other hand, for diffusion larger than a threshold value D c , the sublattice ordering is suppressed and only the usual active (symmetric)-inactive transition is presented. We also show the critical behavior and universality classes are not affected by the diffusion.

  4. Stable families of coalitions for network resource allocation problems

    Directory of Open Access Journals (Sweden)

    Vladimir Gurvich

    2014-02-01

    Full Text Available A very common question appearing in resource management is: what is the optimal way of behaviour of the agents and distribution of limited resources. Is any form of cooperation more preferable strategy than pure competition? How cooperation can be treated in the game theoretic framework: just as one of a set of Pareto optimal solutions or cooperative game theory is a more promising approach? This research is based on results proving the existence of a non-empty K -core, that is, the set of allocations acceptable for the family K of all feasible coalitions, for the case when this family is a set of subtrees of a tree. A wide range of real situations in resource management, which include optimal water, gas and electricity allocation problems, can be modeled using this class of games. Thus, the present research is pursuing two goals: 1. optimality and 2. stability.Firstly, we suggest to players to unify their resources and then we optimize the total payoff using some standard LP technique. The same unification and optimization can be done for any coalition of players, not only for the total one.  However, players may object unification of resources. It may happen when a feasible coalition can guarantee a better result for every coalitionist.  Here we obtain some stability conditions which ensure that this cannot happen for some family K. Such families were characterized by Boros, Gurvich and Vasin [4] as Berge’s normal hypergraphs.  Thus, we obtain a solution which is optimal and stable. From practical point of view, we suggest a distribution of profit that would cause no conflict between players.

  5. Looking for chemical reaction networks exhibiting a drift along a manifold of marginally stable states.

    Science.gov (United States)

    Brogioli, Doriano

    2013-02-07

    I recently reported some examples of mass-action equations that have a continuous manifold of marginally stable stationary states [Brogioli, D., 2010. Marginally stable chemical systems as precursors of life. Phys. Rev. Lett. 105, 058102; Brogioli, D., 2011. Marginal stability in chemical systems and its relevance in the origin of life. Phys. Rev. E 84, 031931]. The corresponding chemical reaction networks show nonclassical effects, i.e. a violation of the mass-action equations, under the effect of the concentration fluctuations: the chemical system drifts along the marginally stable states. I proposed that this effect is potentially involved in abiogenesis. In the present paper, I analyze the mathematical properties of mass-action equations of marginally stable chemical reaction networks. The marginal stability implies that the mass-action equations obey some conservation law; I show that the mathematical properties of the conserved quantity characterize the motion along the marginally stable stationary state manifold, i.e. they allow to predict if the fluctuations give rise to a random walk or a drift under the effect of concentration fluctuations. Moreover, I show that the presence of the drift along the manifold of marginally stable stationary-states is a critical property, i.e. at least one of the reaction constants must be fine tuned in order to obtain the drift. Copyright © 2012 Elsevier Ltd. All rights reserved.

  6. Bipartite graphs as models of population structures in evolutionary multiplayer games.

    Science.gov (United States)

    Peña, Jorge; Rochat, Yannick

    2012-01-01

    By combining evolutionary game theory and graph theory, "games on graphs" study the evolutionary dynamics of frequency-dependent selection in population structures modeled as geographical or social networks. Networks are usually represented by means of unipartite graphs, and social interactions by two-person games such as the famous prisoner's dilemma. Unipartite graphs have also been used for modeling interactions going beyond pairwise interactions. In this paper, we argue that bipartite graphs are a better alternative to unipartite graphs for describing population structures in evolutionary multiplayer games. To illustrate this point, we make use of bipartite graphs to investigate, by means of computer simulations, the evolution of cooperation under the conventional and the distributed N-person prisoner's dilemma. We show that several implicit assumptions arising from the standard approach based on unipartite graphs (such as the definition of replacement neighborhoods, the intertwining of individual and group diversity, and the large overlap of interaction neighborhoods) can have a large impact on the resulting evolutionary dynamics. Our work provides a clear example of the importance of construction procedures in games on graphs, of the suitability of bigraphs and hypergraphs for computational modeling, and of the importance of concepts from social network analysis such as centrality, centralization and bipartite clustering for the understanding of dynamical processes occurring on networked population structures.

  7. Predicting non-linear dynamics by stable local learning in a recurrent spiking neural network.

    Science.gov (United States)

    Gilra, Aditya; Gerstner, Wulfram

    2017-11-27

    The brain needs to predict how the body reacts to motor commands, but how a network of spiking neurons can learn non-linear body dynamics using local, online and stable learning rules is unclear. Here, we present a supervised learning scheme for the feedforward and recurrent connections in a network of heterogeneous spiking neurons. The error in the output is fed back through fixed random connections with a negative gain, causing the network to follow the desired dynamics. The rule for Feedback-based Online Local Learning Of Weights (FOLLOW) is local in the sense that weight changes depend on the presynaptic activity and the error signal projected onto the postsynaptic neuron. We provide examples of learning linear, non-linear and chaotic dynamics, as well as the dynamics of a two-link arm. Under reasonable approximations, we show, using the Lyapunov method, that FOLLOW learning is uniformly stable, with the error going to zero asymptotically.

  8. Stable emulsions formed by self-assembly of interfacial networks of dipeptide derivatives.

    Science.gov (United States)

    Bai, Shuo; Pappas, Charalampos; Debnath, Sisir; Frederix, Pim W J M; Leckie, Joy; Fleming, Scott; Ulijn, Rein V

    2014-07-22

    We demonstrate the use of dipeptide amphiphiles that, by hand shaking of a biphasic solvent system for a few seconds, form emulsions that remain stable for months through the formation of nanofibrous networks at the organic/aqueous interface. Unlike absorption of traditional surfactants, the interfacial networks form by self-assembly through π-stacking interactions and hydrogen bonding. Altering the dipeptide sequence has a dramatic effect on the properties of the emulsions formed, illustrating the possibility of tuning emulsion properties by chemical design. The systems provide superior long-term stability toward temperature and salts compared to with sodium dodecyl sulfate (SDS) and can be enzymatically disassembled causing on-demand demulsification under mild conditions. The interfacial networks facilitate highly tunable and stable encapsulation and compartmentalization with potential applications in cosmetics, therapeutics, and food industry.

  9. Ultra-stable long distance optical frequency distribution using the Internet fiber network.

    Science.gov (United States)

    Lopez, Olivier; Haboucha, Adil; Chanteau, Bruno; Chardonnet, Christian; Amy-Klein, Anne; Santarelli, Giorgio

    2012-10-08

    We report an optical link of 540 km for ultrastable frequency distribution over the Internet fiber network. The stable frequency optical signal is processed enabling uninterrupted propagation on both directions. The robustness and the performance of the link are enhanced by a cost effective fully automated optoelectronic station. This device is able to coherently regenerate the return optical signal with a heterodyne optical phase locking of a low noise laser diode. Moreover the incoming signal polarization variation are tracked and processed in order to maintain beat note amplitudes within the operation range. Stable fibered optical interferometer enables optical detection of the link round trip phase signal. The phase-noise compensated link shows a fractional frequency instability in 10 Hz bandwidth of 5 × 10(-15) at one second measurement time and 2 × 10(-19) at 30,000 s. This work is a significant step towards a sustainable wide area ultrastable optical frequency distribution and comparison network.

  10. Detecting quantum critical points using bipartite fluctuations.

    Science.gov (United States)

    Rachel, Stephan; Laflorencie, Nicolas; Song, H Francis; Le Hur, Karyn

    2012-03-16

    We show that the concept of bipartite fluctuations F provides a very efficient tool to detect quantum phase transitions in strongly correlated systems. Using state-of-the-art numerical techniques complemented with analytical arguments, we investigate paradigmatic examples for both quantum spins and bosons. As compared to the von Neumann entanglement entropy, we observe that F allows us to find quantum critical points with much better accuracy in one dimension. We further demonstrate that F can be successfully applied to the detection of quantum criticality in higher dimensions with no prior knowledge of the universality class of the transition. Promising approaches to experimentally access fluctuations are discussed for quantum antiferromagnets and cold gases.

  11. Catalytic transformations for bipartite pure states

    International Nuclear Information System (INIS)

    Turgut, S

    2007-01-01

    Entanglement catalysis is a phenomenon that usually enhances the conversion probability in the transformation of entangled states by the temporary involvement of another entangled state (so-called catalyst), where after the process is completed the catalyst is returned to the same state. For some pairs of bipartite pure entangled states, catalysis enables a transformation with unit probability of success, in which case the respective Schmidt coefficients of the states are said to satisfy the trumping relation, a mathematical relation which is an extension of the majorization relation. This paper provides all necessary and sufficient conditions for the trumping and two other associated relations. Using these conditions, the least upper bound of conversion probabilities using catalysis is also obtained. Moreover, best conversion ratios achievable with catalysis are found for transformations involving many copies of states

  12. Environmental controls on stable isotopes of precipitation in Lanzhou, China: An enhanced network at city scale.

    Science.gov (United States)

    Chen, Fenli; Zhang, Mingjun; Wang, Shengjie; Qiu, Xue; Du, Mingxia

    2017-12-31

    Stable hydrogen and oxygen isotopes in precipitation are very sensitive to environmental changes, and can record evolution of water cycle. The Lanzhou city in northwestern China is jointly influenced by the monsoon and westerlies, which is considered as a vital platform to investigate the moisture regime for this region. Since 2011, an observation network of stable isotopes in precipitation was established across the city, and four stations were included in the network. In 2013, six more sampling stations were added, and the enhanced network might provide more meaningful information on spatial incoherence and synoptic process. This study focused on the variations of stable isotopes (δ 18 O and δD) in precipitation and the environmental controls based on the 1432 samples in this enhanced network from April 2011 to October 2014. The results showed that the precipitation isotopes had great spatial diversity, and the neighboring stations may present large difference in δD and δ 18 O. Based on the observation at ten sampling sites, an isoscape in precipitation was calculated, and the method is useful to produce isoscape for small domains. The temperature effect and amount effect was reconsidered based on the dataset. Taking meteorological parameters (temperature, precipitation amount, relative humidity, water vapor pressure and dew point temperature) as variables in a multi-linear regression, the result of coefficients for these meteorological parameters were calculated. Some cases were also involved in this study, and the isotopic characteristics during one event or continuous days were used to understand the environmental controls on precipitation isotopes. Copyright © 2017 Elsevier B.V. All rights reserved.

  13. Dynamic recurrent neural networks for stable adaptive control of wing rock motion

    Science.gov (United States)

    Kooi, Steven Boon-Lam

    Wing rock is a self-sustaining limit cycle oscillation (LCO) which occurs as the result of nonlinear coupling between the dynamic response of the aircraft and the unsteady aerodynamic forces. In this thesis, dynamic recurrent RBF (Radial Basis Function) network control methodology is proposed to control the wing rock motion. The concept based on the properties of the Presiach hysteresis model is used in the design of dynamic neural networks. The structure and memory mechanism in the Preisach model is analogous to the parallel connectivity and memory formation in the RBF neural networks. The proposed dynamic recurrent neural network has a feature for adding or pruning the neurons in the hidden layer according to the growth criteria based on the properties of ensemble average memory formation of the Preisach model. The recurrent feature of the RBF network deals with the dynamic nonlinearities and endowed temporal memories of the hysteresis model. The control of wing rock is a tracking problem, the trajectory starts from non-zero initial conditions and it tends to zero as time goes to infinity. In the proposed neural control structure, the recurrent dynamic RBF network performs identification process in order to approximate the unknown non-linearities of the physical system based on the input-output data obtained from the wing rock phenomenon. The design of the RBF networks together with the network controllers are carried out in discrete time domain. The recurrent RBF networks employ two separate adaptation schemes where the RBF's centre and width are adjusted by the Extended Kalman Filter in order to give a minimum networks size, while the outer networks layer weights are updated using the algorithm derived from Lyapunov stability analysis for the stable closed loop control. The issue of the robustness of the recurrent RBF networks is also addressed. The effectiveness of the proposed dynamic recurrent neural control methodology is demonstrated through simulations to

  14. User Matching with Relation to the Stable Marriage Problem in Cognitive Radio Networks

    KAUST Repository

    Hamza, Doha R.

    2017-03-20

    We consider a network comprised of multiple primary users (PUs) and multiple secondary users (SUs), where the SUs seek access to a set of orthogonal channels each occupied by one PU. Only one SU is allowed to coexist with a given PU. We propose a distributed matching algorithm to pair the network users, where a Stackelberg game model is assumed for the interaction between the paired PU and SU. The selected secondary is given access in exchange for monetary compensation to the primary. The PU optimizes the interference price it charges to a given SU and the power allocation to maintain communication. The SU optimizes its power demand so as to maximize its utility. Our algorithm provides a unique stable matching. Numerical results indicate the advantage of the proposed algorithm over other reference schemes.

  15. Effect of Bipartite Hallucal Sesamoid on Hallux Valgus Surgery.

    Science.gov (United States)

    Park, Young Hwan; Jeong, Chan Dong; Choi, Gi Won; Kim, Hak Jun

    2017-06-01

    Bipartite hallucal sesamoids are often found in patients with hallux valgus. However, it is unknown whether bipartite hallucal sesamoids affect the results of hallux valgus surgery or not. The purpose of the present study was to evaluate the outcomes of chevron osteotomy for hallux valgus with and without bipartite hallucal sesamoid. A total of 152 patients (168 feet) treated with distal or proximal chevron osteotomy for hallux valgus constituted the study cohort. The 168 feet were divided into 2 groups: bipartite hallucal sesamoid (31 feet) and without bipartite hallucal sesamoid (137 feet). Hallux valgus angle (HVA), intermetatarsal angle (IMA), distal metatarsal articular angle (DMAA), tibial sesamoid position, and first metatarsal length were measured for radiographic outcomes and the American Orthopaedic Foot & Ankle Society (AOFAS) hallux metatarsophalangeal-interphalangeal (MTP-IP) score was measured for clinical outcomes. All radiographic measurements and the AOFAS score showed significant ( P .05) were found between the 2 groups in terms of HVA, IMA, DMAA, tibial sesamoid position, metatarsal shortening, and AOFAS score on final follow-up. This study suggests that bipartite hallucal sesamoids do not affect the results of hallux valgus surgery. Level III, retrospective comparative study.

  16. Large and stable emission current from synthesized carbon nanotube/fiber network

    International Nuclear Information System (INIS)

    Di, Yunsong; Xiao, Mei; Zhang, Xiaobing; Wang, Qilong; Li, Chen; Lei, Wei; Cui, Yunkang

    2014-01-01

    In order to obtain a large and stable electron field emission current, the carbon nanotubes have been synthesized on carbon fibers by cold wall chemical vapor deposition method. In the hierarchical nanostructures, carbon fibers are entangled together to form a conductive network, it could provide excellent electron transmission and adhesion property between electrode and emitters, dispersed clusters of carbon nanotubes with smaller diameters have been synthesized on the top of carbon fibers as field emitters, this kind of emitter distribution could alleviate electrostatic shielding effect and protect emitters from being wholly destroyed. Field emission properties of this kind of carbon nanotube/fiber network have been tested, up to 30 mA emission current at an applied electric field of 6.4 V/μm was emitted from as-prepared hierarchical nanostructures. Small current degradation at large emission current output by DC power operation indicated that carbon nanotube/fiber network could be a promising candidate for field emission electron source

  17. Stable neural-network-based adaptive control for sampled-data nonlinear systems.

    Science.gov (United States)

    Sun, F; Sun, Z; Woo, P Y

    1998-01-01

    For a class of multiinput-multioutput (MIMO) sampled-data nonlinear systems with unknown dynamic nonlinearities, a stable neural-network (NN)-based adaptive control approach which is an integration of an NN approach and the adaptive implementation of the variable structure control with a sector, is developed. The sampled-data nonlinear system is assumed to be controllable and its state vector is available for measurement. The variable structure control with a sector serves two purposes. One is to force the system state to be within the state region in which the NN's are used when the system goes out of neural control; and the other is to provide an additional control until the system tracking error metric is controlled inside the sector within the network approximation region. The proof of a complete stability and a tracking error convergence is given and the setting of the sector and the NN parameters is discussed. It is demonstrated that the asymptotic error of the system can be made dependent only on inherent network approximation errors and the frequency range of unmodeled dynamics. Simulation studies of a two-link manipulator show the effectiveness of the proposed control approach.

  18. Network topology of stable isotope interactions in a sub-arctic raptor guild.

    Science.gov (United States)

    Dalerum, F; Hellström, P; Miranda, M; Nyström, J; Ekenstedt, J; Angerbjörn, A

    2016-10-01

    Predation is an ecologically important process, and intra-guild interactions may substantially influence the ecological effects of predator species. Despite a rapid expansion in the use of mathematical graph theory to describe trophic relations, network approaches have rarely been used to study interactions within predator assemblages. Assemblages of diurnal raptors are subject to substantial intra- and interspecific competition. Here we used the novel approach of applying analyzes based on network topology to species-specific data on the stable isotopes (13)C and (15)N in feathers to evaluate patterns of relative resource utilization within a guild of diurnal raptors in northern Sweden. Our guild consisted of the golden eagle (Aquila chrysaetos), the gyrfalcon (Falco rusticolus), the peregrine falcon (Falco peregrinus) and the rough-legged buzzard (Buteo lagopus). We found a modular trophic interaction structure within the guild, but the interactions were less nested than expected by chance. These results suggest low redundancy and hence a strong ecological importance of individual species. Our data also suggested that species were less connected through intra-guild interactions than expected by chance. We interpret our results as a convergence on specific isotope niches, and that body size and different hunting behaviour may mediate competition within these niches. We finally highlight that generalist predators could be ecologically important by linking specialist predator species with disparate dietary niches.

  19. The complexity of deriving multi-labeled trees from bipartitions.

    Science.gov (United States)

    Huber, Katharina T; Lott, Martin; Moulton, Vincent; Spillner, Andreas

    2008-01-01

    Recently, multi-labeled trees have been used to help unravel the evolutionary origins of polyploid species. A multi-labeled tree is the same as a phylogenetic tree except that more than one leaf may be labeled by a single species, so that the leaf set of a multi-labeled tree can be regarded as a multiset. In contrast to phylogenetic trees, which can be efficiently encoded in terms of certain bipartitions of their leaf sets, we show that it is NP-hard to decide whether a collection of bipartitions of a multiset can be represented by a multi-labeled tree. Even so, we also show that it is possible to generalize to multi-labeled trees a well-known condition that characterizes when a collection of bipartitions encodes a phylogenetic tree. Using this generalization, we obtain a fixed-parameter algorithm for the above decision problem in terms of a parameter associated to the given multiset.

  20. Cell Selection Using Recursive Bipartite Matching

    DEFF Research Database (Denmark)

    Zakrzewska, Anna; Ruepp, Sarah Renée; Berger, Michael Stübert

    Wireless communication network consist nowadays of multiple standards, as well as cells of different sizes and coverage. Providing the best connection in such environment is a challenging task. We propose a new approach of solving the cell selection problem in heterogeneous networks. The method...

  1. Transformation of bipartite non-maximally entangled states into a ...

    Indian Academy of Sciences (India)

    We present two schemes for transforming bipartite non-maximally entangled states into a W state in cavity QED system, by using highly detuned interactions and the resonant interactions between ... Proceedings of the International Workshop/Conference on Computational Condensed Matter Physics and Materials Science

  2. Schur complements of matrices with acyclic bipartite graphs

    DEFF Research Database (Denmark)

    Britz, Thomas Johann; Olesky, D.D.; van den Driessche, P.

    2005-01-01

    Bipartite graphs are used to describe the generalized Schur complements of real matrices having nos quare submatrix with two or more nonzero diagonals. For any matrix A with this property, including any nearly reducible matrix, the sign pattern of each generalized Schur complement is shown to be ...

  3. Transformation of bipartite non-maximally entangled states into a ...

    Indian Academy of Sciences (India)

    [6], quantum cryptography [7] and so on. The preparation of entangled state becomes more and more important in quantum infor- mation processing. One knows that bipartite entanglement can be generated through a variety of solutions [8–10]. A maximally entangled state of two qubits is called a Bell state. For atomic qubits ...

  4. Virus spread in complete bi-partite graphs

    NARCIS (Netherlands)

    Omic, J.S.; Kooij, R.E.; Mieghem, P. van

    2007-01-01

    In this paper we study the spread of viruses on the complete bi-partite graph Km,n. Using mean field theory we first show that the epidemic threshold for this type of graph satifies Tc = 1/√MN, hence, confirming previous results from literature. Next, we find an expression for the average number of

  5. Schur complements of matrices with acyclic bipartite graphs

    DEFF Research Database (Denmark)

    Britz, Thomas Johann; Olesky, D.D.; van den Driessche, P.

    2005-01-01

    Bipartite graphs are used to describe the generalized Schur complements of real matrices having nos quare submatrix with two or more nonzero diagonals. For any matrix A with this property, including any nearly reducible matrix, the sign pattern of each generalized Schur complement is shown...

  6. Free-anchored Nb2O5@graphene networks for ultrafast-stable lithium storage

    Science.gov (United States)

    Deng, Qinglin; Li, Mengjiao; Wang, Junyong; Jiang, Kai; Hu, Zhigao; Chu, Junhao

    2018-05-01

    Orthorhombic Nb2O5 (T-Nb2O5) has structural merit but poor electrical conductivity, limiting their applications in energy storage. Although graphene is frequently adopted to effectively improve its electrochemical properties, the ordinary modified methods cannot meet the growing demands for high-performance. Here, we demonstrate that different graphene modified routes play a vital role in affecting the electrochemical performances of T-Nb2O5. By only manual shaking within one minute, Nb2O5 nano-particles can be rapidly adsorbed onto graphene, then the free-anchored T-Nb2O5@graphene three-dimensional networks can be successfully prepared based on hydrogel method. As for the application in lithium-ion batteries, it performs outstanding rate character (129 mA h g-1 (25C rate), 110 mA h g-1 (50C rate) and 90 mA h g-1 (100C rate), correspond to 79%, 67% and 55% capacity of 0.5C rate, respectively) and excellent long-term cycling feature (˜70% capacity retention after 20000 cycles). Moreover, it still maintains similar ultrafast-stable lithium storage performances when Cu foil is substituted by Al foil as current collector. In addition, relevant kinetics mechanisms are also expounded. This work provides a versatile strategy for the preparation of graphene modified Nb2O5 or other types of nanoparticles.

  7. Bipartite Medial Cuneiform: Case Report and Retrospective Review of 1000 Magnetic Resonance (MR Imaging Studies

    Directory of Open Access Journals (Sweden)

    Geraldine H. Chang

    2014-01-01

    Full Text Available Objective. To present a unique case report of a Lisfranc fracture in a patient with a bipartite medial cuneiform and to evaluate the prevalence of the bipartite medial cuneiform in a retrospective review of 1000 magnetic resonance (MR imaging studies of the foot. Materials and Methods. Case report followed by a retrospective review of 1000 MR imaging studies of the foot for the presence or absence of a bipartite medial cuneiform. Results. The incidence of the bipartite medial cuneiform is 0.1%. Conclusion. A bipartite medial cuneiform is a rare finding but one with both clinical and surgical implications.

  8. Statistical Mechanics of a Simplified Bipartite Matching Problem: An Analytical Treatment

    Science.gov (United States)

    Dell'Erba, Matías Germán

    2012-03-01

    We perform an analytical study of a simplified bipartite matching problem in which there exists a constant matching energy, and both heterosexual and homosexual pairings are allowed. We obtain the partition function in a closed analytical form and we calculate the corresponding thermodynamic functions of this model. We conclude that the model is favored at high temperatures, for which the probabilities of heterosexual and homosexual pairs tend to become equal. In the limits of low and high temperatures, the system is extensive, however this property is lost in the general case. There exists a relation between the matching energies for which the system becomes more stable under external (thermal) perturbations. As the difference of energies between the two possible matches increases the system becomes more ordered, while the maximum of entropy is achieved when these energies are equal. In this limit, there is a first order phase transition between two phases with constant entropy.

  9. Comment on "Protecting bipartite entanglement by quantum interferences"

    Science.gov (United States)

    Nair, Anjali N.; Arun, R.

    2018-03-01

    In an interesting article [Phys. Rev. A 81, 052341 (2010), 10.1103/PhysRevA.81.052341], Das and Agarwal have discussed the preservation of bipartite entanglement in three-level atoms employing the coherences induced by spontaneous emission. The authors considered various initially entangled qubits prepared from two V -type three-level atoms and showed that more than 50 % of the initial (bipartite) entanglement can be preserved in steady state due to vacuum-induced coherence. In this Comment, we point out that their analytical formulas for the entanglement measure contain errors affecting all the numerical results of that article. We substantiate our claim by giving correct analytical results for the time evolution of the two-atom system.

  10. Bipartite Diametrical Graphs of Diameter 4 and Extreme Orders

    Directory of Open Access Journals (Sweden)

    Salah Al-Addasi

    2008-01-01

    in which this upper bound is attained, this graph can be viewed as a generalization of the Rhombic Dodecahedron. Then we show that for any ≥2, the graph (2,2 is the unique (up to isomorphism bipartite diametrical graph of diameter 4 and partite sets of cardinalities 2 and 2, and hence in particular, for =3, the graph (6,8 which is just the Rhombic Dodecahedron is the unique (up to isomorphism bipartite diametrical graph of such a diameter and cardinalities of partite sets. Thus we complete a characterization of -graphs of diameter 4 and cardinality of the smaller partite set not exceeding 6. We prove that the neighborhoods of vertices of the larger partite set of (2,2 form a matroid whose basis graph is the hypercube . We prove that any -graph of diameter 4 is bipartite self complementary, thus in particular (2,2. Finally, we study some additional properties of (2,2 concerning the order of its automorphism group, girth, domination number, and when being Eulerian.

  11. Combining Stable Isotope Labeling and Molecular Networking for Biosynthetic Pathway Characterization

    DEFF Research Database (Denmark)

    Klitgaard, Andreas; Nielsen, Jakob Blæsbjerg; Frandsen, Rasmus John Normand

    2015-01-01

    Filamentous fungi are a rich source of bioactive compounds, ranging from statins over immunosuppressants to antibiotics. The coupling of genes to metabolites is of large commercial interest for production of the bioactives of the future. To this end, we have investigated the use of stable isotope...... of the peptide sequence, which could be used to provide information on biosynthesis of bioactive compounds....

  12. The Global Network of Isotopes in Rivers (GNIR): Integration of Stable Water Isotopes in Riverine Research and Management

    International Nuclear Information System (INIS)

    Halder, J.; Terzer, S.; Wassenaar, L.; Araguas, L.; Aggarwal, P.

    2015-01-01

    Rivers play a crucial role in the global water cycle as watershed-integrating hydrological conduits for returning terrestrial precipitation, runoff, surface and groundwater, as well as melting snow and ice back to the world’s oceans. The IAEA Global Network of Isotopes in Rivers (GNIR) is the coherent extension of the IAEA Global Network for Isotopes in Precipitation (GNIP) and aims to fill the informational data gaps between rainfall and river discharge. Whereas the GNIP has been surveying the stable hydrogen and oxygen isotopes, and tritium composition in precipitation, the objective of GNIR is to accumulate and disseminate riverine isotope data. We introduce the new global database of riverine water isotopes and evaluate its current long-term data holdings with the objective to improve the application of water isotopes and to inform water managers and researchers. An evaluation of current GNIR database holdings confirmed that seasonal variations of the stable water isotope composition in rivers are closely coupled to precipitation and snow-melt water run-off on a global scale. Rivers could be clustered on the basis of seasonal variations in their isotope composition and latitude. Results showed furthermore, that there were periodic phases within each of these groupings and additional modelling exercises allowed a priori prediction of the seasonal variability as well as the isotopic composition of stable water isotopes in rivers. This predictive capacity will help to improve existing and new sampling strategies, help to validate and interpret riverine isotope data, and identify important catchment processes. Hence, the IAEA promulgates and supports longterm hydrological isotope observation networks and the application of isotope studies complementary with conventional hydrological, water quality, and ecological studies. (author)

  13. Magnetic resonance imaging features of asymptomatic bipartite patella

    International Nuclear Information System (INIS)

    O'Brien, J.; Murphy, C.; Halpenny, D.; McNeill, G.; Torreggiani, W.C.

    2011-01-01

    Objective: The purpose of our study was to describe the magnetic resonance imaging (MRI) features of bipartite patella in asymptomatic patients. Materials and methods: The study was prospective in type and performed following institutional ethical committees approval. In total, 25 subjects were recruited into the study and informed consent obtained in each case. The local radiology database was utilised in conjunction with a clinical questionnaire to identify patients who had asymptomatic bipartite patella. Any patient with a history of trauma or symptomatic disease was excluded from the study. MRI imaging was performed in each case on a 1.5 T system using a dedicated knee coil and a standardised knee protocol. The images obtained were then analysed by two musculoskeletal radiologists in consensus. Results: Of the 25 subjects, there were 8 females and 17 males. The mean age was 34.6 years. All but one of the bipartite fragments were located on the superolateral aspect of the patella. In 23 cases, one fragment was identified. The average transverse diameter of the fragment was 12.8 mm. The average distance between the fragment and the adjacent patella in the axial plane was 1.46 mm. In addition, the cartilage overlying the patella and accessory fragment was intact in all cases. The average thickness of the patella cartilage at its border to the fragment was 2.4 mm with an average ratio of the cartilage thickness of the fragment as compared with the cartilage thickness of the patella of 0.72. There was no evidence of high signal or bone marrow oedema on fluid sensitive sequences within either the patella or the fragment in any of the patients. Fluid was identified in the cleft between the patella and the fragment in the majority of cases. Conclusions: Asymptomatic bipartite patella is characterised by intact but thinned cartilage along the border between the patella and the fragment, fluid between the cleft and a lack of any bone marrow oedema or high signal within

  14. Magnetic resonance imaging features of asymptomatic bipartite patella

    Energy Technology Data Exchange (ETDEWEB)

    O' Brien, J., E-mail: juliemobrien@gmail.com [Department of Radiology, Adelaide and Meath Incorporating National Children' s Hospital, Tallaght, Dublin 24 (Ireland); Murphy, C.; Halpenny, D.; McNeill, G.; Torreggiani, W.C. [Department of Radiology, Adelaide and Meath Incorporating National Children' s Hospital, Tallaght, Dublin 24 (Ireland)

    2011-06-15

    Objective: The purpose of our study was to describe the magnetic resonance imaging (MRI) features of bipartite patella in asymptomatic patients. Materials and methods: The study was prospective in type and performed following institutional ethical committees approval. In total, 25 subjects were recruited into the study and informed consent obtained in each case. The local radiology database was utilised in conjunction with a clinical questionnaire to identify patients who had asymptomatic bipartite patella. Any patient with a history of trauma or symptomatic disease was excluded from the study. MRI imaging was performed in each case on a 1.5 T system using a dedicated knee coil and a standardised knee protocol. The images obtained were then analysed by two musculoskeletal radiologists in consensus. Results: Of the 25 subjects, there were 8 females and 17 males. The mean age was 34.6 years. All but one of the bipartite fragments were located on the superolateral aspect of the patella. In 23 cases, one fragment was identified. The average transverse diameter of the fragment was 12.8 mm. The average distance between the fragment and the adjacent patella in the axial plane was 1.46 mm. In addition, the cartilage overlying the patella and accessory fragment was intact in all cases. The average thickness of the patella cartilage at its border to the fragment was 2.4 mm with an average ratio of the cartilage thickness of the fragment as compared with the cartilage thickness of the patella of 0.72. There was no evidence of high signal or bone marrow oedema on fluid sensitive sequences within either the patella or the fragment in any of the patients. Fluid was identified in the cleft between the patella and the fragment in the majority of cases. Conclusions: Asymptomatic bipartite patella is characterised by intact but thinned cartilage along the border between the patella and the fragment, fluid between the cleft and a lack of any bone marrow oedema or high signal within

  15. Normally ordered expansion of 3-dimensional bipartite Coulomb potential operator

    Energy Technology Data Exchange (ETDEWEB)

    Fan Hongyi [CCAST (World Laboratory), P.O. Box 8730, Beijing 100080 (China) and Department of Physics, Shanghai Jiao Tong University, Shanghai 200030 (China) and Department of Material Science and Engineering, University of Science and Technology of China, Hefei, Anhui 230026 (China)]. E-mail: fhym@ustc.edu.cn; Fu Liang [Special Class for the Gifted Young, University of Science and Technology of China, Hefei, Anhui 230026 (China)

    2004-08-23

    We derive the normally ordered expansion formula of bipartite Coulomb potential operator vertical bar R->{alpha}-R->{beta} vertical bar -1 by virtue of the method of integral within an ordered product of operators and the entangled state representation, where vertical bar R->{alpha}-R->{beta} vertical bar is the distance between two particles' positions. The new expansion formula provides convenience for calculating its coherent states' matrix elements. The normally ordered expansion of vertical bar R->{alpha}-R->{beta} vertical bar k, k>=-2, is also deduced.

  16. Joint accurate time and stable frequency distribution infrastructure sharing fiber footprint with research network

    Czech Academy of Sciences Publication Activity Database

    Vojtěch, J.; Šlapák, M.; Škoda, P.; Radil, J.; Havliš, O.; Altmann, M.; Münster, P.; Velč, R.; Kundrát, J.; Altmannová, L.; Vohnout, R.; Horváth, T.; Hůla, M.; Smotlacha, V.; Čížek, Martin; Pravdová, Lenka; Řeřucha, Šimon; Hrabina, Jan; Číp, Ondřej

    2017-01-01

    Roč. 56, č. 2 (2017), s. 1-7, č. článku 027101. ISSN 0091-3286 R&D Projects: GA ČR GB14-36681G Institutional support: RVO:68081731 Keywords : accurate time * stable frequency * wavelength division multiplexing * bidirectional reciprocal path * Sagnac effect Subject RIV: BH - Optics, Masers, Lasers OBOR OECD: Optics (including laser optics and quantum optics) Impact factor: 1.082, year: 2016

  17. A Secure and Stable Multicast Overlay Network with Load Balancing for Scalable IPTV Services

    Directory of Open Access Journals (Sweden)

    Tsao-Ta Wei

    2012-01-01

    Full Text Available The emerging multimedia Internet application IPTV over P2P network preserves significant advantages in scalability. IPTV media content delivered in P2P networks over public Internet still preserves the issues of privacy and intellectual property rights. In this paper, we use SIP protocol to construct a secure application-layer multicast overlay network for IPTV, called SIPTVMON. SIPTVMON can secure all the IPTV media delivery paths against eavesdroppers via elliptic-curve Diffie-Hellman (ECDH key exchange on SIP signaling and AES encryption. Its load-balancing overlay tree is also optimized from peer heterogeneity and churn of peer joining and leaving to minimize both service degradation and latency. The performance results from large-scale simulations and experiments on different optimization criteria demonstrate SIPTVMON's cost effectiveness in quality of privacy protection, stability from user churn, and good perceptual quality of objective PSNR values for scalable IPTV services over Internet.

  18. Upper bounds on entangling rates of bipartite Hamiltonians

    International Nuclear Information System (INIS)

    Bravyi, Sergey

    2007-01-01

    We discuss upper bounds on the rate at which unitary evolution governed by a nonlocal Hamiltonian can generate entanglement in a bipartite system. Given a bipartite Hamiltonian H coupling two finite dimensional particles A and B, the entangling rate is shown to be upper bounded by c log(d) parallel H parallel, where d is the smallest dimension of the interacting particles parallel H parallel is the operator norm of H, and c is a constant close to 1. Under certain restrictions on the initial state we prove an analogous upper bound for the ancilla-assisted entangling rate with a constant c that does not depend upon dimensions of local ancillas. The restriction is that the initial state has at most two distinct Schmidt coefficients (each coefficient may have arbitrarily large multiplicity). Our proof is based on analysis of a mixing rate - a functional measuring how fast entropy can be produced if one mixes a time-independent state with a state evolving unitarily

  19. Rad-Tolerant, Thermally Stable, High-Speed Fiber-Optic Network for Harsh Environments

    Science.gov (United States)

    Leftwich, Matt; Hull, Tony; Leary, Michael; Leftwich, Marcus

    2013-01-01

    Future NASA destinations will be challenging to get to, have extreme environmental conditions, and may present difficulty in retrieving a spacecraft or its data. Space Photonics is developing a radiation-tolerant (rad-tolerant), high-speed, multi-channel fiber-optic transceiver, associated reconfigurable intelligent node communications architecture, and supporting hardware for intravehicular and ground-based optical networking applications. Data rates approaching 3.2 Gbps per channel will be achieved.

  20. Marginally Stable Triangular Recurrent Neural Network Architecture for Time Series Prediction.

    Science.gov (United States)

    Sivakumar, Seshadri; Sivakumar, Shyamala

    2017-09-25

    This paper introduces a discrete-time recurrent neural network architecture using triangular feedback weight matrices that allows a simplified approach to ensuring network and training stability. The triangular structure of the weight matrices is exploited to readily ensure that the eigenvalues of the feedback weight matrix represented by the block diagonal elements lie on the unit circle in the complex z-plane by updating these weights based on the differential of the angular error variable. Such placement of the eigenvalues together with the extended close interaction between state variables facilitated by the nondiagonal triangular elements, enhances the learning ability of the proposed architecture. Simulation results show that the proposed architecture is highly effective in time-series prediction tasks associated with nonlinear and chaotic dynamic systems with underlying oscillatory modes. This modular architecture with dual upper and lower triangular feedback weight matrices mimics fully recurrent network architectures, while maintaining learning stability with a simplified training process. While training, the block-diagonal weights (hence the eigenvalues) of the dual triangular matrices are constrained to the same values during weight updates aimed at minimizing the possibility of overfitting. The dual triangular architecture also exploits the benefit of parsing the input and selectively applying the parsed inputs to the two subnetworks to facilitate enhanced learning performance.

  1. Stable Learning of Functional Maps in Self-Organizing Spiking Neural Networks with Continuous Synaptic Plasticity

    Directory of Open Access Journals (Sweden)

    Narayan eSrinivasa

    2013-02-01

    Full Text Available This study describes a spiking model that self-organizes for stable formation and maintenance of orientation and ocular dominance maps in the visual cortex (V1. This self-organization process simulates three development phases: an early experience-independent phase, a late experience-independent phase and a subsequent refinement phase during which experience acts to shape the map properties. The ocular dominance maps that emerge accommodate the two sets of monocular inputs that arise from the lateral geniculate nucleus (LGN to layer 4 of V1. The orientation selectivity maps that emerge feature well-developed iso-orientation domains and fractures. During the last two phases of development the orientation preferences at some locations appear to rotate continuously through +/- 180 along circular paths and referred to as pinwheel-like patterns but without any corresponding point discontinuities in the orientation gradient maps. The formation of these functional maps is driven by balanced excitatory and inhibitory currents that are established via synaptic plasticity based on spike timing for both excitatory and inhibitory synapses. The stability and maintenance of the formed maps with continuous synaptic plasticity is enabled by homeostasis caused by inhibitory plasticity. However, a prolonged exposure to repeated stimuli does alter the formed maps over time due to plasticity. The results from this study suggest that continuous synaptic plasticity in both excitatory neurons and interneurons could play a critical role in the formation, stability, and maintenance of functional maps in the cortex.

  2. Stable learning of functional maps in self-organizing spiking neural networks with continuous synaptic plasticity.

    Science.gov (United States)

    Srinivasa, Narayan; Jiang, Qin

    2013-01-01

    This study describes a spiking model that self-organizes for stable formation and maintenance of orientation and ocular dominance maps in the visual cortex (V1). This self-organization process simulates three development phases: an early experience-independent phase, a late experience-independent phase and a subsequent refinement phase during which experience acts to shape the map properties. The ocular dominance maps that emerge accommodate the two sets of monocular inputs that arise from the lateral geniculate nucleus (LGN) to layer 4 of V1. The orientation selectivity maps that emerge feature well-developed iso-orientation domains and fractures. During the last two phases of development the orientation preferences at some locations appear to rotate continuously through ±180° along circular paths and referred to as pinwheel-like patterns but without any corresponding point discontinuities in the orientation gradient maps. The formation of these functional maps is driven by balanced excitatory and inhibitory currents that are established via synaptic plasticity based on spike timing for both excitatory and inhibitory synapses. The stability and maintenance of the formed maps with continuous synaptic plasticity is enabled by homeostasis caused by inhibitory plasticity. However, a prolonged exposure to repeated stimuli does alter the formed maps over time due to plasticity. The results from this study suggest that continuous synaptic plasticity in both excitatory neurons and interneurons could play a critical role in the formation, stability, and maintenance of functional maps in the cortex.

  3. Robust and Stable Disturbance Observer of Servo System for Low Speed Operation Using the Radial Basis Function Network

    DEFF Research Database (Denmark)

    Lee, Kyo-Beum; Blaabjerg, Frede

    2005-01-01

    A new scheme to estimate the moment of inertia in the servo motor drive system in very low speed is proposed in this paper. The speed estimation scheme in most servo drive systems for low speed operation is sensitive to the variation of machine parameter, especially the moment of inertia....... To estimate the motor inertia value, the observer using the Radial Basis Function Network (RBFN) is applied. A control law for stabilizing the system and adaptive laws for updating both of the weights in the RBFN and a bounding constant are established so that the whole closed-loop system is stable...... in the sense of Lyapunov. The effectiveness of the proposed inertia estimation is verified by simulations and experiments. It is concluded that the speed control performance in low speed region is improved with the proposed disturbance observer using RBFN....

  4. Acute ethanol treatment upregulates th1, th2 and hdc in larval zebrafish in stable networks

    Directory of Open Access Journals (Sweden)

    Henri ePuttonen

    2013-05-01

    Full Text Available Earlier studies in zebrafish have revealed that acutely given ethanol has a stimulatory effect on locomotion in fish larvae but the mechanism of this effect has not been revealed. We studied the effects of ethanol concentrations between 0.75% and 3.00% on 7-day-old larval zebrafish (Danio rerio of the Turku strain. At 0.75-3% concentrations ethanol increased swimming speed during the first minute. At 3% the swimming speed decreased rapidly after the first minute, whereas at 0.75 and 1.5% a prolonged increase in swimming speed was seen. At the highest ethanol concentration dopamine levels decreased significantly after a 10-min treatment. We found that ethanol upregulates key genes involved in the biosynthesis of histamine (hdc and dopamine (th1 and th2 following a short 10-min ethanol treatment, measured by qPCR. Using in situ hybridisation and immunohistochemistry, we further discovered that the morphology of the histaminergic and dopaminergic neurons and networks in the larval zebrafish brain was unaffected by both the 10-min and a longer 30-min treatment. The results suggest that acute ethanol rapidly decreases dopamine levels, and activates both forms or th to replenish the dopamine stores within 30 minutes. The dynamic changes in histaminergic and dopaminergic system enzymes occured in the same cells which normally express the transcripts. As both dopamine and histamine are known to be involved in the behavioural effects of ethanol and locomotor stimulation, these results suggest that rapid adaptations of these networks are associated with altered locomotor activity.

  5. E6 and the bipartite entanglement of three qutrits

    International Nuclear Information System (INIS)

    Duff, M. J.; Ferrara, S.

    2007-01-01

    Recent investigations have established an analogy between the entropy of four-dimensional supersymmetric black holes in string theory and entanglement in quantum information theory. Examples include: (1) N=2 STU black holes and the tripartite entanglement of three qubits (2-state systems), where the common symmetry is [SL(2)] 3 and (2) N=8 black holes and the tripartite entanglement of seven qubits where the common symmetry is E 7 superset of [SL(2)] 7 . Here we present another example: N=8 black holes (or black strings) in five dimensions and the bipartite entanglement of three qutrits (3-state systems), where the common symmetry is E 6 superset of [SL(3)] 3 . Both the black hole (or black string) entropy and the entanglement measure are provided by the Cartan cubic E 6 invariant. Similar analogies exist for magic N=2 supergravity black holes in both four and five dimensions

  6. No-signaling, perfect bipartite dichotomic correlations and local randomness

    International Nuclear Information System (INIS)

    Seevinck, M. P.

    2011-01-01

    The no-signaling constraint on bi-partite correlations is reviewed. It is shown that in order to obtain non-trivial Bell-type inequalities that discern no-signaling correlations from more general ones, one must go beyond considering expectation values of products of observables only. A new set of nontrivial no-signaling inequalities is derived which have a remarkably close resemblance to the CHSH inequality, yet are fundamentally different. A set of inequalities by Roy and Singh and Avis et al., which is claimed to be useful for discerning no-signaling correlations, is shown to be trivially satisfied by any correlation whatsoever. Finally, using the set of newly derived no-signaling inequalities a result with potential cryptographic consequences is proven: if different parties use identical devices, then, once they have perfect correlations at spacelike separation between dichotomic observables, they know that because of no-signaling the local marginals cannot but be completely random.

  7. Quantum correlations for bipartite continuous-variable systems

    Science.gov (United States)

    Ma, Ruifen; Hou, Jinchuan; Qi, Xiaofei; Wang, Yangyang

    2018-04-01

    Two quantum correlations Q and Q_P for (m+n)-mode continuous-variable systems are introduced in terms of average distance between the reduced states under the local Gaussian positive operator-valued measurements, and analytical formulas of these quantum correlations for bipartite Gaussian states are provided. It is shown that the product states do not contain these quantum correlations, and conversely, all (m+n)-mode Gaussian states with zero quantum correlations are product states. Generally, Q≥ Q_{P}, but for the symmetric two-mode squeezed thermal states, these quantum correlations are the same and a computable formula is given. In addition, Q is compared with Gaussian geometric discord for symmetric squeezed thermal states.

  8. Entanglement dynamics of a pure bipartite system in dissipative environments

    Energy Technology Data Exchange (ETDEWEB)

    Tahira, Rabia; Ikram, Manzoor; Azim, Tasnim; Suhail Zubairy, M [Centre for Quantum Physics, COMSATS Institute of Information Technology, Islamabad (Pakistan)

    2008-10-28

    We investigate the phenomenon of sudden death of entanglement in a bipartite system subjected to dissipative environments with arbitrary initial pure entangled state between two atoms. We find that in a vacuum reservoir the presence of the state where both atoms are in excited states is a necessary condition for the sudden death of entanglement. Otherwise entanglement remains for an infinite time and decays asymptotically with the decay of individual qubits. For pure 2-qubit entangled states in a thermal environment, we observe that the sudden death of entanglement always happens. The sudden death time of the entangled states is related to the temperature of the reservoir and the initial preparation of the entangled states.

  9. Entanglement dynamics of a pure bipartite system in dissipative environments

    International Nuclear Information System (INIS)

    Tahira, Rabia; Ikram, Manzoor; Azim, Tasnim; Suhail Zubairy, M

    2008-01-01

    We investigate the phenomenon of sudden death of entanglement in a bipartite system subjected to dissipative environments with arbitrary initial pure entangled state between two atoms. We find that in a vacuum reservoir the presence of the state where both atoms are in excited states is a necessary condition for the sudden death of entanglement. Otherwise entanglement remains for an infinite time and decays asymptotically with the decay of individual qubits. For pure 2-qubit entangled states in a thermal environment, we observe that the sudden death of entanglement always happens. The sudden death time of the entangled states is related to the temperature of the reservoir and the initial preparation of the entangled states.

  10. $E_{6}$ and the bipartite entanglement of three qutrits

    CERN Document Server

    Duff, M J

    2007-01-01

    Recent investigations have established an analogy between the entropy of four-dimensional supersymmetric black holes in string theory and entanglement in quantum information theory. Examples include: (1) N=2 STU black holes and the tripartite entanglement of three qubits (2-state systems), where the common symmetry is [SL(2)]^3 and (2) N=8 black holes and the tripartite entanglement of seven qubits where the common symmetry is E_7 which contains [SL(2)]^7. Here we present another example: N=8 black holes (or black strings) in five dimensions and the bipartite entanglement of three qutrits (3-state systems), where the common symmetry is E_6 which contains [SL(3)]^3. Both the black hole (or black string) entropy and the entanglement measure are provided by the Cartan cubic E_6 invariant. Similar analogies exist for ``magic'' N=2 supergravity black holes in both four and five dimensions.

  11. Asystasia mosaic Madagascar virus: a novel bipartite begomovirus infecting the weed Asystasia gangetica in Madagascar.

    Science.gov (United States)

    De Bruyn, Alexandre; Harimalala, Mireille; Hoareau, Murielle; Ranomenjanahary, Sahondramalala; Reynaud, Bernard; Lefeuvre, Pierre; Lett, Jean-Michel

    2015-06-01

    Here, we describe for the first time the complete genome sequence of a new bipartite begomovirus in Madagascar isolated from the weed Asystasia gangetica (Acanthaceae), for which we propose the tentative name asystasia mosaic Madagascar virus (AMMGV). DNA-A and -B nucleotide sequences of AMMGV were only distantly related to known begomovirus sequence and shared highest nucleotide sequence identity of 72.9 % (DNA-A) and 66.9 % (DNA-B) with a recently described bipartite begomovirus infecting Asystasia sp. in West Africa. Phylogenetic analysis demonstrated that this novel virus from Madagascar belongs to a new lineage of Old World bipartite begomoviruses.

  12. A Family of Bipartite |Cardinality Matching Problems Solvable in O(n\\^2) Time

    DEFF Research Database (Denmark)

    Clausen, Jens; Krarup, J.

    1995-01-01

    For a given, unweighted bipartite graph G with 2n non isolated vertices, we consider the so called bipartite cardinality matching problem (BCMP) for which the time complexity of the fastest exact algorithm available is O(n/sup 5/2/ ). We devise a greedy algorithm which either finds a perfect...... matching in O(n/sup 2/ ) time or identifies cycle of length 4 in the complement G of G...

  13. Factors controlling stable isotope composition of precipitation in arid conditions: an observation network in the Tianshan Mountains, central Asia

    Directory of Open Access Journals (Sweden)

    Shengjie Wang

    2016-02-01

    Full Text Available Approximately one-third of the Earth's arid areas are distributed across central Asia. The stable isotope composition of precipitation in this region is affected by its aridity, therefore subject to high evaporation and low precipitation amount. To investigate the factors controlling stable water isotopes in precipitation in arid central Asia, an observation network was established around the Tianshan Mountains in 2012. Based on the 1052 event-based precipitation samples collected at 23 stations during 2012–2013, the spatial distribution and seasonal variation of δD and δ18O in precipitation were investigated. The values of δD and δ18O are relatively more enriched in the rainfall dominant summer months (from April to October and depleted in the drier winter months (from November to March with low D-excess due to subcloud evaporation observed at many of the driest low elevation stations. The local meteoric water line (LMWL was calculated to be δD=7.36δ18O – 0.50 (r2=0.97, p<0.01 based on the event-based samples, and δD=7.60δ18O+2.66 (r2=0.98, p<0.01 based on the monthly precipitation-weighted values. In winter, the data indicate an isotopic rain shadow effect whereby rainout leads to depletion of precipitation in the most arid region to the south of the Tianshan Mountains. The values of δ18O significantly correlate with air temperature for each station, and the best-fit equation is established as δ18O=0.78T – 16.01 (r2=0.73, p<0.01. Using daily air temperature and precipitation derived from a 0.5° (latitude×0.5° (longitude gridded data set, an isoscape of δ18O in precipitation was produced based on this observed temperature effect.

  14. Drivers of compartmentalization in a Mediterranean pollination network

    DEFF Research Database (Denmark)

    Gonzalez, Ana M. Martin; Allesina, Stefano; Rodrigo, Anselm

    2012-01-01

    We study compartmentalization in a Mediterranean pollination network using three different analytical approaches: unipartite modularity (UM), bipartite modularity (BM) and the group model (GM). Our objectives are to compare compartments obtained with these three approaches and to explore the role...

  15. Conditional mutual information of bipartite unitaries and scrambling

    Energy Technology Data Exchange (ETDEWEB)

    Ding, Dawei; Hayden, Patrick; Walter, Michael [Stanford Institute for Theoretical Physics, Department of Physics, Stanford University,382 Via Pueblo, Stanford, CA 94305 (United States)

    2016-12-28

    One way to diagnose chaos in bipartite unitary channels is via the tripartite information of the corresponding Choi state, which for certain choices of the subsystems reduces to the negative conditional mutual information (CMI). We study this quantity from a quantum information-theoretic perspective to clarify its role in diagnosing scrambling. When the CMI is zero, we find that the channel has a special normal form consisting of local channels between individual inputs and outputs. However, we find that arbitrarily low CMI does not imply arbitrary proximity to a channel of this form, although it does imply a type of approximate recoverability of one of the inputs. When the CMI is maximal, we find that the residual channel from an individual input to an individual output is completely depolarizing when the other input is maximally mixed. However, we again find that this result is not robust. We also extend some of these results to the multipartite case and to the case of Haar-random pure input states. Finally, we look at the relationship between tripartite information and its Rényi-2 version which is directly related to out-of-time-order correlation functions. In particular, we demonstrate an arbitrarily large gap between the two quantities.

  16. Combinatorial optimization networks and matroids

    CERN Document Server

    Lawler, Eugene

    2011-01-01

    Perceptively written text examines optimization problems that can be formulated in terms of networks and algebraic structures called matroids. Chapters cover shortest paths, network flows, bipartite matching, nonbipartite matching, matroids and the greedy algorithm, matroid intersections, and the matroid parity problems. A suitable text or reference for courses in combinatorial computing and concrete computational complexity in departments of computer science and mathematics.

  17. Modeling online social signed networks

    Science.gov (United States)

    Li, Le; Gu, Ke; Zeng, An; Fan, Ying; Di, Zengru

    2018-04-01

    People's online rating behavior can be modeled by user-object bipartite networks directly. However, few works have been devoted to reveal the hidden relations between users, especially from the perspective of signed networks. We analyze the signed monopartite networks projected by the signed user-object bipartite networks, finding that the networks are highly clustered with obvious community structure. Interestingly, the positive clustering coefficient is remarkably higher than the negative clustering coefficient. Then, a Signed Growing Network model (SGN) based on local preferential attachment is proposed to generate a user's signed network that has community structure and high positive clustering coefficient. Other structural properties of the modeled networks are also found to be similar to the empirical networks.

  18. Complete genome sequence of a new bipartite begomovirus infecting fluted pumpkin (Telfairia occidentalis) plants in Cameroon.

    Science.gov (United States)

    Leke, Walter N; Khatabi, Behnam; Fondong, Vincent N; Brown, Judith K

    2016-08-01

    The complete genome sequence was determined and characterized for a previously unreported bipartite begomovirus from fluted pumpkin (Telfairia occidentalis, family Cucurbitaceae) plants displaying mosaic symptoms in Cameroon. The DNA-A and DNA-B components were ~2.7 kb and ~2.6 kb in size, and the arrangement of viral coding regions on the genomic components was like those characteristic of other known bipartite begomoviruses originating in the Old World. While the DNA-A component was more closely related to that of chayote yellow mosaic virus (ChaYMV), at 78 %, the DNA-B component was more closely related to that of soybean chlorotic blotch virus (SbCBV), at 64 %. This newly discovered bipartite Old World virus is herein named telfairia mosaic virus (TelMV).

  19. Identification and functional characterization of a novel bipartite nuclear localization sequence in ARID1A

    Energy Technology Data Exchange (ETDEWEB)

    Bateman, Nicholas W. [Women' s Health Integrated Research Center at Inova Health System, Gynecologic Cancer Center of Excellence, Annandale 22003, VA (United States); The John P. Murtha Cancer Center, Walter Reed National Military Medical Center, 8901 Wisconsin Avenue, Bethesda 20889, MD (United States); Shoji, Yutaka [Department of Obstetrics, Gynecology and Reproductive Biology, Michigan State University, Grand Rapids 49503, MI (United States); Conrads, Kelly A.; Stroop, Kevin D. [Women' s Health Integrated Research Center at Inova Health System, Gynecologic Cancer Center of Excellence, Annandale 22003, VA (United States); Hamilton, Chad A. [Women' s Health Integrated Research Center at Inova Health System, Gynecologic Cancer Center of Excellence, Annandale 22003, VA (United States); The John P. Murtha Cancer Center, Walter Reed National Military Medical Center, 8901 Wisconsin Avenue, Bethesda 20889, MD (United States); Gynecologic Oncology Service, Department of Obstetrics and Gynecology, Walter Reed National Military Medical Center, 8901 Wisconsin Ave, MD, Bethesda, 20889 (United States); Department of Obstetrics and Gynecology, Uniformed Services University of the Health Sciences, Bethesda 20814, MD (United States); Darcy, Kathleen M. [Women' s Health Integrated Research Center at Inova Health System, Gynecologic Cancer Center of Excellence, Annandale 22003, VA (United States); The John P. Murtha Cancer Center, Walter Reed National Military Medical Center, 8901 Wisconsin Avenue, Bethesda 20889, MD (United States); Maxwell, George L. [Department of Obstetrics and Gynecology, Inova Fairfax Hospital, Falls Church, VA 22042 (United States); Risinger, John I. [Department of Obstetrics, Gynecology and Reproductive Biology, Michigan State University, Grand Rapids 49503, MI (United States); and others

    2016-01-01

    AT-rich interactive domain-containing protein 1A (ARID1A) is a recently identified nuclear tumor suppressor frequently altered in solid tumor malignancies. We have identified a bipartite-like nuclear localization sequence (NLS) that contributes to nuclear import of ARID1A not previously described. We functionally confirm activity using GFP constructs fused with wild-type or mutant NLS sequences. We further show that cyto-nuclear localized, bipartite NLS mutant ARID1A exhibits greater stability than nuclear-localized, wild-type ARID1A. Identification of this undescribed functional NLS within ARID1A contributes vital insights to rationalize the impact of ARID1A missense mutations observed in patient tumors. - Highlights: • We have identified a bipartite nuclear localization sequence (NLS) in ARID1A. • Confirmation of the NLS was performed using GFP constructs. • NLS mutant ARID1A exhibits greater stability than wild-type ARID1A.

  20. A novel bipartite nuclear localization signal with an atypically long linker in DOF transcription factors.

    Science.gov (United States)

    Krebs, Jonas; Mueller-Roeber, Bernd; Ruzicic, Slobodan

    2010-05-01

    Large molecules require a nuclear localization signal (NLS) for translocation into the nucleus. Classical NLSs are rich in basic amino acids and they represent three groups, based on their structural features: SV40 T-antigen-type, yeast mating factor Matalpha-2-type, and bipartite NLSs. DNA-binding-with-one-finger (DOF) transcription factors play important roles in plants, and although their nuclear localization has been demonstrated in several cases, public protein localization prediction tools fail to detect NLS motifs in these proteins. Here, we demonstrate that an atypical bipartite NLS with a 17 amino acid long linker between its flanking basic regions directs Arabidopsis thaliana DOF proteins to the cell nucleus. The novel bipartite NLS is highly conserved in plant DOF transcription factors, including the single DOF protein in the green alga Chlamydomonas reinhardtii. Copyright 2010 Elsevier GmbH. All rights reserved.

  1. Congenital bipartite atlas with hypodactyly in a dog: clinical, radiographic and CT findings.

    Science.gov (United States)

    Wrzosek, M; Płonek, M; Zeira, O; Bieżyński, J; Kinda, W; Guziński, M

    2014-07-01

    A three-year-old Border collie was diagnosed with a bipartite atlas and bilateral forelimb hypodactyly. The dog showed signs of acute, non-progressive neck pain, general stiffness and right thoracic limb non-weight-bearing lameness. Computed tomography imaging revealed a bipartite atlas with abaxial vertical bone proliferation, which was the cause of the clinical signs. In addition, bilateral hypodactyly of the second and fifth digits was incidentally found. This report suggests that hypodactyly may be associated with atlas malformations. © 2014 British Small Animal Veterinary Association.

  2. BATAS ATAS BILANGAN RAMSEY UNTUK GRAF BINTANG DAN GRAF BIPARTIT LENGKAP

    OpenAIRE

    Rosyida, Isnaini

    2008-01-01

    Misal G dan H dua buah graf sebarang, bilangan Ramsey R(G,H) adalah bilangan asli terkecil n sehingga untuk setiap graf F dengan n titik akan memuat G atau komplemen dari F memuat H. Makalah ini akan membahas batas atas dari bilangan Ramsey untuk graf bintang Sn dan graf bipartit lengkap Kp,q. Khususnya, kita akan menunjukkan batas atas dari R(Sn, K2,q) serta batas atas dari R(Sn, Kp,q) untuk n ≥ 5, 3 ≤ p ≤ n-1 dan q ≤ 2.Kata Kunci : Bilangan Ramsey, Graf Bintang dan Bipartit

  3. Traumatic separation of a type I patella bipartite in a sportsman

    DEFF Research Database (Denmark)

    Ottesen, Casper Smedegaard; Barfod, Kristoffer Weisskirchner; Holck, Kim

    2014-01-01

    This is a case report of a 44-year-old sportsman who experi-enced acute onset of strong pain and loss of ability to extend his right knee during a game of beach volley. X-ray imaging showed a patella in two parts with rounded edges and with a diastasis of more than 2 cm. Intra-operatively atrophic...... fibrocartilage was found on both parts of the patella. Asymptomatic patella bi-partite was found on X-ray imaging of the patient's left knee, and he was diagnosed to have traumatic separation of a type I patella bipartite. The diagnosis was confirmed by surgical and radiological findings....

  4. Family of Crouzon Syndrome Represents the Evolution of the Frontofacial Monobloc Advancement Technique: From Immediate Movement to Monobloc Distraction to Monobloc Bipartition Distraction.

    Science.gov (United States)

    Raposo-Amaral, Cassio Eduardo; Denadai, Rafael; Ghizoni, Enrico; Buzzo, Celso Luiz; Raposo-Amaral, Cesar Augusto

    2015-09-01

    Crouzon syndrome (CS) is an autosomal dominant disorder characterized by premature fusion of cranial sutures, midface and supraorbital ridge retrusion, exorbitism, and in some clinical scenarios strabismus, parrot-beaked nose, short upper lip and hypertelorbitism. Treatment of CS is overlapped with the beginning of craniofacial surgery and is grounded on morphologic and functional objectives. The authors reported on the outcomes and complications of family members (mother and 2 siblings) with CS, who were operated on by different techniques of frontofacial advancement and have attained skeletal maturity. Operations were performed in different moments throughout the last 3 decades of craniofacial surgery history. A 10-year-old Crouzon progenitor underwent a monobloc osteotomy with acute advancement, using rigid fixation and bone grafting in the osteotomy sites. An 8-year-old Crouzon daughter underwent gradual lengthening of a monobloc segment, using an external, institutionally made distracter device. In addition, a 10-year-old Crouzon son underwent gradual lengthening of a monobloc segment associated to facial bipartition, using an internal distracter device. After 30 years, the mother presented a mild relapse on the orbit level, but her children had satisfactory stable outcomes. The family members with CS have undergone different modifications of the monobloc approach based on different chronological momentum, from acute monobloc advancement, to monobloc distraction, to monobloc facial bipartition distraction.

  5. Nonclassicality and entanglement criteria for bipartite optical fields characterized by quadratic detectors

    Czech Academy of Sciences Publication Activity Database

    Peřina Jr., J.; Arkhipov, I.I.; Michálek, Václav; Haderka, Ondřej

    2017-01-01

    Roč. 96, č. 4 (2017), s. 1-15, č. článku 043845. ISSN 2469-9926 Institutional support: RVO:68378271 Keywords : parametric down-conversion * photon statistic * bipartite optical fields * quadratic detectors Subject RIV: BH - Optics, Masers, Lasers OBOR OECD: Optics (including laser optics and quantum optics) Impact factor: 2.925, year: 2016

  6. Simplified bipartite concepts of functioning and disability recommended for interdisciplinary use of the ICF.

    Science.gov (United States)

    Thyberg, Mikael; Arvidsson, Patrik; Thyberg, Ingrid; Nordenfelt, Lennart

    2015-01-01

    To argue for and propose bipartite concepts of functioning and disability, to tally with the structure of the ICF classification list, concepts of social models and clinical needs. The ICF concepts are discussed in relation to the history of ideas regarding disability concepts and the needs for such concepts in interdisciplinary rehabilitation. Bipartite concepts are presented; they refer to actual functioning, simply body functions/structures and participation, including functioning in standardized environments. Participation refers to actually performed "activities", with "activities" simply denoting things that people may do. Bipartite concepts are congruent with the ICF classification and the structure of social models of disability, suitable for clinical and interdisciplinary use and easy to understand. The issue of standardized environments represents a methodological issue rather than the conceptual issue of defining functioning and disability. An individual perspective on activity and activity limitations, i.e. the middle part of the tripartite ICF concept, is somewhat similar to concepts of traditional language that were regarded as too generalizing already in 1912, when the interactional concept of "disability in a social sense" was introduced in rehabilitation practices. Bipartite concepts of functioning and disability are recommended for interdisciplinary use of the ICF. The ICF classification is useful, but the ICF concept of activities in an individual perspective is confusing. We suggest a use of the term "activities" simply to denote things that people may do and "participation" to denote actually performed activities. Estimations of ability should be explicit about how they are related to environmental factors.

  7. Parameterized complexity results for general factors in bipartite graphs with an application to constraint programming

    DEFF Research Database (Denmark)

    Gutin, Gregory; Kim, Eun Jung; Soleimanfallah, Arezou

    2012-01-01

    The NP-hard general factor problem asks, given a graph and for each vertex a list of integers, whether the graph has a spanning subgraph where each vertex has a degree that belongs to its assigned list. The problem remains NP-hard even if the given graph is bipartite with partition U V, and each ...

  8. A Note on Equivalence of Bipartite States under Local Unitary Transformations

    OpenAIRE

    Sun, Bao-Zhi; Fei, Shao-Ming; Li-Jost, Xianqing; Wang, Zhi-Xi

    2006-01-01

    The equivalence of arbitrary dimensional bipartite states under local unitary transformations (LUT) is studied. A set of invariants and ancillary invariants under LUT is presented. We show that two states are equivalent under LUT if and only if they have the same values for all of these invariants.

  9. Traumatic separation of an uncommon bipartite patella type: a case report.

    Science.gov (United States)

    Tauber, Mark; Matis, Nicholas; Resch, Herbert

    2007-01-01

    The authors report about a case of traumatic separation of a horizontally bipartite patella in a young female soccer player. Unspecific anterior knee pain preceded the fracture, which had occurred after an inadequate trauma. Open reduction and osteosynthesis led to bony union with an excellent clinical outcome at follow-up.

  10. The study of entanglement and teleportation of the harmonic oscillator bipartite coherent states

    Directory of Open Access Journals (Sweden)

    A Rabeie and

    2015-01-01

    Full Text Available In this paper, we reproduce the harmonic oscillator bipartite coherent states with imperfect cloning of coherent states. We show that if these entangled coherent states are embedded in a vacuum environment, their entanglement is degraded but not totally lost . Also, the optimal fidelity of these states is worked out for investigating their teleportation

  11. More Stable Ties or Better Structure? An Examination of the Impact of Co-author Network on Team Knowledge Creation

    Directory of Open Access Journals (Sweden)

    Mingze Li

    2017-09-01

    Full Text Available This study aims to explore the influence of co-author network on team knowledge creation. Integrating the two traditional perspectives of network relationship and network structure, we examine the direct and interactive effects of tie stability and structural holes on team knowledge creation. Tracking scientific articles published by 111 scholars in the research field of human resource management from the top 8 American universities, we analyze scholars’ scientific co-author networks. The result indicates that tie stability changes the teams’ information processing modes and, when graphed, results in an inverted U-shape relationship between tie stability and team knowledge creation. Moreover, structural holes in co-author network are proved to be harmful to team knowledge sharing and diffusion, thereby impeding team knowledge creation. Also, tie stability and structural hole interactively influence team knowledge creation. When the number of structural hole is low in the co-author network, the graphical representation of the relationship between tie stability and team knowledge creation tends to be a more distinct U-shape.

  12. Design of a tripartite network for the prediction of drug targets

    Science.gov (United States)

    Kunimoto, Ryo; Bajorath, Jürgen

    2018-02-01

    Drug-target networks have aided in many target prediction studies aiming at drug repurposing or the analysis of side effects. Conventional drug-target networks are bipartite. They contain two different types of nodes representing drugs and targets, respectively, and edges indicating pairwise drug-target interactions. In this work, we introduce a tripartite network consisting of drugs, other bioactive compounds, and targets from different sources. On the basis of analog relationships captured in the network and so-called neighbor targets of drugs, new drug targets can be inferred. The tripartite network was found to have a stable structure and simulated network growth was accompanied by a steady increase in assortativity, reflecting increasing correlation between degrees of connected nodes leading to even network connectivity. Local drug environments in the tripartite network typically contained neighbor targets and revealed interesting drug-compound-target relationships for further analysis. Candidate targets were prioritized. The tripartite network design extends standard drug-target networks and provides additional opportunities for drug target prediction.

  13. Conditional firing probabilities in cultured neuronal networks: a stable underlying structure in widely varying spontaneous activity patterns

    NARCIS (Netherlands)

    le Feber, Jakob; Rutten, Wim; Stegenga, J.; Wolters, P.S.; Ramakers, G.J.A.; van Pelt, J.

    2007-01-01

    To properly observe induced connectivity changes after training sessions, one needs a network model that describes individual relationships in sufficient detail to enable observation of induced changes and yet reveals some kind of stability in these relationships. We analyzed spontaneous firing

  14. Ag-bridged Ag2O nanowire network/TiO2 nanotube array p-n heterojunction as a highly efficient and stable visible light photocatalyst.

    Science.gov (United States)

    Liu, Chengbin; Cao, Chenghao; Luo, Xubiao; Luo, Shenglian

    2015-03-21

    A unique Ag-bridged Ag2O nanowire network/TiO2 nanotube array p-n heterojunction (Ag-Ag2O/TiO2 NT) was fabricated by simple electrochemical method. Ag nanoparticles were firstly electrochemically deposited onto the surface of TiO2 NT and then were partly oxidized to Ag2O nanowires while the rest of Ag mother nanoparticles were located at the junctions of Ag2O nanowire network. The Ag-Ag2O/TiO2 NT heterostructure exhibited strong visible-light response, effective separation of photogenerated carriers, and high adsorption capacity. The integration of Ag-Ag2O self-stability structure and p-n heterojunction permitted high and stable photocatalytic activity of Ag-Ag2O/TiO2 NT heterostructure photocatalyst. Under 140-min visible light irradiation, the photocatalytic removal efficiency of both dye acid orange 7 (AO7) and industrial chemical p-nitrophenol (PNP) over Ag-Ag2O/TiO2 NT reached nearly 100% much higher than 17% for AO7 or 13% for PNP over bare TiO2 NT. After 5 successive cycles under 600-min simulated solar light irradiation, Ag-Ag2O/TiO2 NT remained highly stable photocatalytic activity. Copyright © 2014 Elsevier B.V. All rights reserved.

  15. Ecological, historical and evolutionary determinants of modularity in weighted seed-dispersal networks

    DEFF Research Database (Denmark)

    Schleuning, Matthias; Ingmann, Lili; Strauß, Rouven

    2014-01-01

    Modularity is a recurrent and important property of bipartite ecological networks. Although well-resolved ecological networks describe interaction frequencies between species pairs, modularity of bipartite networks has been analysed only on the basis of binary presence-absence data. We employ a n...... demonstrates the dominating impact of ecological factors on the structure of seed-dispersal networks, but also underscores the relevance of evolutionary history in shaping species roles in ecological communities.......Modularity is a recurrent and important property of bipartite ecological networks. Although well-resolved ecological networks describe interaction frequencies between species pairs, modularity of bipartite networks has been analysed only on the basis of binary presence-absence data. We employ a new...... algorithm to detect modularity in weighted bipartite networks in a global analysis of avian seed-dispersal networks. We define roles of species, such as connector values, for weighted and binary networks and associate them with avian species traits and phylogeny. The weighted, but not binary, analysis...

  16. Bipartite entangled stabilizer mutually unbiased bases as maximum cliques of Cayley graphs

    Energy Technology Data Exchange (ETDEWEB)

    Dam, Wim van; Howard, Mark [Department of Computer Science, University of California, Santa Barbara, California 93106, USA and (United States); Department of Physics, University of California, Santa Barbara, California 93106 (United States); Department of Physics, University of California, Santa Barbara, California 93106 (United States)

    2011-07-15

    We examine the existence and structure of particular sets of mutually unbiased bases (MUBs) in bipartite qudit systems. In contrast to well-known power-of-prime MUB constructions, we restrict ourselves to using maximally entangled stabilizer states as MUB vectors. Consequently, these bipartite entangled stabilizer MUBs (BES MUBs) provide no local information, but are sufficient and minimal for decomposing a wide variety of interesting operators including (mixtures of) Jamiolkowski states, entanglement witnesses, and more. The problem of finding such BES MUBs can be mapped, in a natural way, to that of finding maximum cliques in a family of Cayley graphs. Some relationships with known power-of-prime MUB constructions are discussed, and observables for BES MUBs are given explicitly in terms of Pauli operators.

  17. Bipartite hallucal sesamoid bones: relationship with hallux valgus and metatarsal index

    Energy Technology Data Exchange (ETDEWEB)

    Munuera, Pedro V.; Dominguez, Gabriel [University of Seville, Department of Podiatrics, Seville (Spain); Centro Docente de Fisioterapia y Podologia, Departamento de Podologia, Seville (Spain); Reina, Maria; Trujillo, Piedad [Centro Docente de Fisioterapia y Podologia, Departamento de Podologia, Seville (Spain)

    2007-11-15

    The objective was to relate the incidence of the partition of the hallucal sesamoid bones to the size of the first metatarsal and the hallux valgus deformity. In a sample of 474 radiographs, the frequency of appearance of bipartite sesamoids was studied. The length and relative protrusion of the first metatarsal, and the hallux abductus angle, were measured and compared between the feet with and without sesamoid partition. The results showed that 14.6% of the feet studied had at least one partite sesamoid, that the sesamoid most frequently divided was the medial, and that unilateral partition was the most common. No difference was found in the incidence of partite sesamoids between men and women, or between left and right feet. Protrusion and length of the first metatarsal are greater in feet with partite sesamoids than in feet without this condition. A significantly higher incidence of bipartite medial sesamoid was obtained in feet with hallux valgus compared with normal feet. (orig.)

  18. Bipartite hallucal sesamoid bones: relationship with hallux valgus and metatarsal index

    International Nuclear Information System (INIS)

    Munuera, Pedro V.; Dominguez, Gabriel; Reina, Maria; Trujillo, Piedad

    2007-01-01

    The objective was to relate the incidence of the partition of the hallucal sesamoid bones to the size of the first metatarsal and the hallux valgus deformity. In a sample of 474 radiographs, the frequency of appearance of bipartite sesamoids was studied. The length and relative protrusion of the first metatarsal, and the hallux abductus angle, were measured and compared between the feet with and without sesamoid partition. The results showed that 14.6% of the feet studied had at least one partite sesamoid, that the sesamoid most frequently divided was the medial, and that unilateral partition was the most common. No difference was found in the incidence of partite sesamoids between men and women, or between left and right feet. Protrusion and length of the first metatarsal are greater in feet with partite sesamoids than in feet without this condition. A significantly higher incidence of bipartite medial sesamoid was obtained in feet with hallux valgus compared with normal feet. (orig.)

  19. Phase-controlled localization and directed transport in an optical bipartite lattice.

    Science.gov (United States)

    Hai, Kuo; Luo, Yunrong; Lu, Gengbiao; Hai, Wenhua

    2014-02-24

    We investigate coherent control of a single atom interacting with an optical bipartite lattice via a combined high-frequency modulation. Our analytical results show that the quantum tunneling and dynamical localization can depend on phase difference between the modulation components, which leads to a different route for the coherent destruction of tunneling and a convenient phase-control method for stabilizing the system to implement the directed transport of atom. The similar directed transport and the phase-controlled quantum transition are revealed for the corresponding many-particle system. The results can be referable for experimentally manipulating quantum transport and transition of cold atoms in the tilted and shaken optical bipartite lattice or of analogical optical two-mode quantum beam splitter, and also can be extended to other optical and solid-state systems.

  20. Forbidden regimes in the distribution of bipartite quantum correlations due to multiparty entanglement

    Energy Technology Data Exchange (ETDEWEB)

    Kumar, Asutosh [Harish-Chandra Research Institute, Chhatnag Road, Jhunsi, Allahabad 211019 (India); Homi Bhabha National Institute, Anushaktinagar, Mumbai 400094 (India); Dhar, Himadri Shekhar [Harish-Chandra Research Institute, Chhatnag Road, Jhunsi, Allahabad 211019 (India); Institute for Theoretical Physics, Vienna University of Technology, Wiedner Hauptstraße 8-10/136, A-1040 Vienna (Austria); Prabhu, R. [Harish-Chandra Research Institute, Chhatnag Road, Jhunsi, Allahabad 211019 (India); Department of Physics, Indian Institute of Technology Patna, Patna 800013 (India); Sen, Aditi [Harish-Chandra Research Institute, Chhatnag Road, Jhunsi, Allahabad 211019 (India); Homi Bhabha National Institute, Anushaktinagar, Mumbai 400094 (India); Sen, Ujjwal, E-mail: ujjwal@hri.res.in [Harish-Chandra Research Institute, Chhatnag Road, Jhunsi, Allahabad 211019 (India); Homi Bhabha National Institute, Anushaktinagar, Mumbai 400094 (India)

    2017-05-25

    Monogamy is a nonclassical property that limits the distribution of quantum correlation among subparts of a multiparty system. We show that monogamy scores for different quantum correlation measures are bounded above by functions of genuine multipartite entanglement for a large majority of pure multiqubit states. The bound is universal for all three-qubit pure states. We derive necessary conditions to characterize the states that violate the bound, which can also be observed by numerical simulation for a small set of states, generated Haar uniformly. The results indicate that genuine multipartite entanglement restricts the distribution of bipartite quantum correlations in a multiparty system. - Highlights: • Monogamy is an intrinsic property of several quantum characteristics including entanglement. • It is possible to quantify monogamy by using the so-called monogamy scores. • Genuine multisite entanglement can be used to bound monogamy scores. • Distribution of bipartite entanglement in a system is, therefore, restricted by its multisite entanglement content.

  1. Increased pathogenicity in a pseudorecombinant bipartite geminivirus correlates with intermolecular recombination.

    OpenAIRE

    Hou, Y M; Gilbertson, R L

    1996-01-01

    Most whitefly-transmitted geminiviruses possess bipartite DNA genomes, and this feature may facilitate viral evolution through pseudorecombination and/or recombination. To test this hypothesis, the DNA-A and DNA-B components of the geminiviruses bean dwarf mosaic virus (BDMV) and tomato mottle virus (ToMoV) were exchanged, and the resultant pseudorecombinants were serially passaged through plants. Both pseudorecombinants were infectious in Nicotiana benthamiana but induced attenuated symptoms...

  2. iBGP: A Bipartite Graph Propagation Approach for Mobile Advertising Fraud Detection

    OpenAIRE

    Hu, Jinlong; Liang, Junjie; Dong, Shoubin

    2017-01-01

    Online mobile advertising plays a vital financial role in supporting free mobile apps, but detecting malicious apps publishers who generate fraudulent actions on the advertisements hosted on their apps is difficult, since fraudulent traffic often mimics behaviors of legitimate users and evolves rapidly. In this paper, we propose a novel bipartite graph-based propagation approach, iBGP, for mobile apps advertising fraud detection in large advertising system. We exploit the characteristics of m...

  3. Prediction of bipartite transcriptional regulatory elements using transcriptome data of Arabidopsis.

    Science.gov (United States)

    Yamamoto, Yoshiharu Y; Ichida, Hiroyuki; Hieno, Ayaka; Obata, Daichi; Tokizawa, Mutsutomo; Nomoto, Mika; Tada, Yasuomi; Kusunoki, Kazutaka; Koyama, Hiroyuki; Hayami, Natsuki

    2017-06-01

    In our previous study, a methodology was established to predict transcriptional regulatory elements in promoter sequences using transcriptome data based on a frequency comparison of octamers. Some transcription factors, including the NAC family, cannot be covered by this method because their binding sequences have non-specific spacers in the middle of the two binding sites. In order to remove this blind spot in promoter prediction, we have extended our analysis by including bipartite octamers that are composed of '4 bases-a spacer with a flexible length-4 bases'. 8,044 pre-selected bipartite octamers, which had an overrepresentation of specific spacer lengths in promoter sequences and sequences related to core elements removed, were subjected to frequency comparison analysis. Prediction of ER stress-responsive elements in the BiP/BiPL promoter and an ANAC017 target sequence resulted in precise detection of true positives, judged by functional analyses of a reported article and our own in vitro protein-DNA binding assays. These results demonstrate that incorporation of bipartite octamers with continuous ones improves promoter prediction significantly. © The Author 2017. Published by Oxford University Press on behalf of Kazusa DNA Research Institute.

  4. Fundamental limitation on quantum broadcast networks

    Science.gov (United States)

    Bäuml, Stefan; Azuma, Koji

    2017-06-01

    The ability to distribute entanglement over complex quantum networks is an important step towards a quantum internet. Recently, there has been significant theoretical effort, mainly focusing on the distribution of bipartite entanglement via a simple quantum network composed only of bipartite quantum channels. There are, however, a number of quantum information processing protocols based on multipartite rather than bipartite entanglement. Whereas multipartite entanglement can be distributed by means of a network of such bipartite channels, a more natural way is to use a more general network, that is, a quantum broadcast network including quantum broadcast channels. In this work, we present a general framework for deriving upper bounds on the rates at which GHZ states or multipartite private states can be distributed among a number of different parties over an arbitrary quantum broadcast network. Our upper bounds are written in terms of the multipartite squashed entanglement, corresponding to a generalisation of recently derived bounds (Azuma et al, (2016), Nat. Commun. 7 13523). We also discuss how lower bounds can be obtained by combining a generalisation of an aggregated quantum repeater protocol with graph theoretic concepts.

  5. A Highly Stable Microporous Covalent Imine Network Adsorbent for Natural Gas Upgrading and Flue Gas CO2 Capture

    KAUST Repository

    Das, Swapan Kumar

    2016-06-06

    The feasible capture and separation of CO2 and N2 from CH4 is an important task for natural gas upgrading and the control of greenhouse gas emissions. Here, we studied the microporous covalent imine networks (CIN) material prepared through Schiff base condensation and exhibited superior chemical robustness under both acidic and basic conditions and high thermal stability. The material possesses a relatively uniform nanoparticle size of approximately 70 to 100 nm. This network featured permanent porosity with a high surface area (722 m2g-1) and micropores. A single-component gas adsorption study showed enhanced CO2 and CH4 uptakes of 3.32 mmol/g and 1.14 mmol/g, respectively, at 273 K and 1 bar, coupled with high separation selectivities for CO2/CH4, CH4/N2, and CO2/N2 of 23, 11.8 and 211, respectively. The enriched Lewis basicity in the porous skeletons favours the interaction of quadrupolar CO2 and polarizable CH4, resulting in enhanced CH4 and CO2 uptake and high CH4/N2, CO2/CH4 and CO2/N2 selectivities. Breakthrough experiments showed high CO2/CH4, CH4/N2 and CO2/N2 selectivities of 7.29, 40 and 125, respectively, at 298 K and 1 bar. High heats of adsorption for CH4 and CO2 (QstCH4; 32.61 kJ mol-1 and QstCO2; 42.42 kJ mol-1) provide the ultimate validation for the high selectivity. To the best of our knowledge, such a versatile adsorbent material that displays both enhanced uptake and selectivity for a variety of binary gas mixtures, including CO2/ CH4, CO2/N2 and CH4/N2, has not been extensively explored.

  6. Stable isotopes

    International Nuclear Information System (INIS)

    Evans, D.K.

    1986-01-01

    Seventy-five percent of the world's stable isotope supply comes from one producer, Oak Ridge Nuclear Laboratory (ORNL) in the US. Canadian concern is that foreign needs will be met only after domestic needs, thus creating a shortage of stable isotopes in Canada. This article describes the present situation in Canada (availability and cost) of stable isotopes, the isotope enrichment techniques, and related research programs at Chalk River Nuclear Laboratories (CRNL)

  7. Bipartite Topology of Treponema pallidum Repeat Proteins C/D and I

    Science.gov (United States)

    Anand, Arvind; LeDoyt, Morgan; Karanian, Carson; Luthra, Amit; Koszelak-Rosenblum, Mary; Malkowski, Michael G.; Puthenveetil, Robbins; Vinogradova, Olga; Radolf, Justin D.

    2015-01-01

    We previously identified Treponema pallidum repeat proteins TprC/D, TprF, and TprI as candidate outer membrane proteins (OMPs) and subsequently demonstrated that TprC is not only a rare OMP but also forms trimers and has porin activity. We also reported that TprC contains N- and C-terminal domains (TprCN and TprCC) orthologous to regions in the major outer sheath protein (MOSPN and MOSPC) of Treponema denticola and that TprCC is solely responsible for β-barrel formation, trimerization, and porin function by the full-length protein. Herein, we show that TprI also possesses bipartite architecture, trimeric structure, and porin function and that the MOSPC-like domains of native TprC and TprI are surface-exposed in T. pallidum, whereas their MOSPN-like domains are tethered within the periplasm. TprF, which does not contain a MOSPC-like domain, lacks amphiphilicity and porin activity, adopts an extended inflexible structure, and, in T. pallidum, is tightly bound to the protoplasmic cylinder. By thermal denaturation, the MOSPN and MOSPC-like domains of TprC and TprI are highly thermostable, endowing the full-length proteins with impressive conformational stability. When expressed in Escherichia coli with PelB signal sequences, TprC and TprI localize to the outer membrane, adopting bipartite topologies, whereas TprF is periplasmic. We propose that the MOSPN-like domains enhance the structural integrity of the cell envelope by anchoring the β-barrels within the periplasm. In addition to being bona fide T. pallidum rare outer membrane proteins, TprC/D and TprI represent a new class of dual function, bipartite bacterial OMP. PMID:25805501

  8. Complete genome sequences of two novel bipartite begomoviruses infecting common bean in Cuba.

    Science.gov (United States)

    Chang-Sidorchuk, Lidia; González-Alvarez, Heidy; Navas-Castillo, Jesús; Fiallo-Olivé, Elvira; Martínez-Zubiaur, Yamila

    2017-05-01

    The common bean is a host for a large number of begomoviruses (genus Begomovirus, family Geminiviridae) in the New World. Based on the current taxonomic criteria established for the genus Begomovirus, two new members of this genus infecting common bean (Phaseolus vulgaris) in Cuba are herein reported. The cloned bipartite genomes, composed of DNA-A and DNA-B, showed the typical organization of the New World begomoviruses. We propose the names common bean severe mosaic virus and common bean mottle virus for the new begomovirus species.

  9. Evolution of gossip-based indirect reciprocity on a bipartite network

    NARCIS (Netherlands)

    Giardini, Francesca; Vilone, Daniele

    2016-01-01

    Cooperation can be supported by indirect reciprocity via reputation. Thanks to gossip, reputations are built and circulated and humans can identify defectors and ostracize them. However, the evolutionary stability of gossip is allegedly undermined by the fact that it is more error-prone that direct

  10. Non-parametric co-clustering of large scale sparse bipartite networks on the GPU

    DEFF Research Database (Denmark)

    Hansen, Toke Jansen; Mørup, Morten; Hansen, Lars Kai

    2011-01-01

    Co-clustering is a problem of both theoretical and practical importance, e.g., market basket analysis and collaborative filtering, and in web scale text processing. We state the co-clustering problem in terms of non-parametric generative models which can address the issue of estimating the number...... of row and column clusters from a hypothesis space of an infinite number of clusters. To reach large scale applications of co-clustering we exploit that parameter inference for co-clustering is well suited for parallel computing. We develop a generic GPU framework for efficient inference on large scale......-life large scale collaborative filtering data and web scale text corpora, demonstrating that latent mesoscale structures extracted by the co-clustering problem as formulated by the Infinite Relational Model (IRM) are consistent across consecutive runs with different initializations and also relevant...

  11. AMBIENT: Active Modules for Bipartite Networks - using high-throughput transcriptomic data to dissect metabolic response

    OpenAIRE

    Bryant, William A; Sternberg, Michael JE; Pinney, John W

    2013-01-01

    Background With the continued proliferation of high-throughput biological experiments, there is a pressing need for tools to integrate the data produced in ways that produce biologically meaningful conclusions. Many microarray studies have analysed transcriptomic data from a pathway perspective, for instance by testing for KEGG pathway enrichment in sets of upregulated genes. However, the increasing availability of species-specific metabolic models provides the opportunity to analyse these da...

  12. Design process robustness: A bi-partite network analysis reveals the central importance of people

    DEFF Research Database (Denmark)

    Piccolo, Sebastiano; Jørgensen, Sune Lehmann; Maier, Anja

    2018-01-01

    and activities. We find that our process is more vulnerable to attacks to people rather than activities. These findings show how the allocation of people to activities can obscure an inherent fragility, making the process highly sensitive and dependent on specific people. More generally, we show......Design processes require the joint effort of many people to collaborate and work on multiple activities. Effective techniques to analyse and model design processes are important for understanding organisational dynamics, for improving collaboration, and for planning robust design processes......, reducing the risk of rework and delays. Although there has been much progress in modelling and understanding design processes, little is known about the interplay between people and the activities they perform and its influence on design process robustness. To analyse this interplay, we model a large...

  13. Effects of high-order correlations on personalized recommendations for bipartite networks

    Science.gov (United States)

    Liu, Jian-Guo; Zhou, Tao; Che, Hong-An; Wang, Bing-Hong; Zhang, Yi-Cheng

    2010-02-01

    In this paper, we introduce a modified collaborative filtering (MCF) algorithm, which has remarkably higher accuracy than the standard collaborative filtering. In the MCF, instead of the cosine similarity index, the user-user correlations are obtained by a diffusion process. Furthermore, by considering the second-order correlations, we design an effective algorithm that depresses the influence of mainstream preferences. Simulation results show that the algorithmic accuracy, measured by the average ranking score, is further improved by 20.45% and 33.25% in the optimal cases of MovieLens and Netflix data. More importantly, the optimal value λ depends approximately monotonously on the sparsity of the training set. Given a real system, we could estimate the optimal parameter according to the data sparsity, which makes this algorithm easy to be applied. In addition, two significant criteria of algorithmic performance, diversity and popularity, are also taken into account. Numerical results show that as the sparsity increases, the algorithm considering the second-order correlation can outperform the MCF simultaneously in all three criteria.

  14. iBGP: A Bipartite Graph Propagation Approach for Mobile Advertising Fraud Detection

    Directory of Open Access Journals (Sweden)

    Jinlong Hu

    2017-01-01

    Full Text Available Online mobile advertising plays a vital financial role in supporting free mobile apps, but detecting malicious apps publishers who generate fraudulent actions on the advertisements hosted on their apps is difficult, since fraudulent traffic often mimics behaviors of legitimate users and evolves rapidly. In this paper, we propose a novel bipartite graph-based propagation approach, iBGP, for mobile apps advertising fraud detection in large advertising system. We exploit the characteristics of mobile advertising user’s behavior and identify two persistent patterns: power law distribution and pertinence and propose an automatic initial score learning algorithm to formulate both concepts to learn the initial scores of non-seed nodes. We propose a weighted graph propagation algorithm to propagate the scores of all nodes in the user-app bipartite graphs until convergence. To extend our approach for large-scale settings, we decompose the objective function of the initial score learning model into separate one-dimensional problems and parallelize the whole approach on an Apache Spark cluster. iBGP was applied on a large synthetic dataset and a large real-world mobile advertising dataset; experiment results demonstrate that iBGP significantly outperforms other popular graph-based propagation methods.

  15. Evolution of African cassava mosaic virus by recombination between bipartite and monopartite begomoviruses

    Directory of Open Access Journals (Sweden)

    Tiendrébéogo Fidèle

    2012-03-01

    Full Text Available Abstract Background Cassava mosaic disease (CMD is a major constraint on cassava cultivation in Africa. The disease is endemic and is caused by seven distinct cassava mosaic geminiviruses (CMGs, some of them including several variants. Findings From cassava leaf samples presenting CMD symptoms collected in Burkina Faso, four DNA-A begomovirus components were cloned and sequenced, showing 99.9% nucleotide identity among them. These isolates are most closely related to African cassava mosaic virus (ACMV but share less than 89% nucleotide identity (taxonomic threshold with any previously described begomovirus. A DNA-B genomic component, sharing 93% nucleotide identity with DNA-B of ACMV, was also characterized. Since all genomic components have a typical genome organization of Old World bipartite begomoviruses, this new species was provisionally named African cassava mosaic Burkina Faso virus (ACMBFV. Recombination analysis of the new virus demonstrated an interspecies recombinant origin, with major parents related to West African isolates of ACMV, and minor parents related to Tomato leaf curl Cameroon virus and Cotton leaf curl Gezira virus. Conclusion This is the first report of an ACMV-like recombinant begomovirus arisen by interspecific recombination between bipartite and monopartite African begomoviruses.

  16. Bi-directional astrocytic regulation of neuronal activity within a network

    Directory of Open Access Journals (Sweden)

    Susan Yu Gordleeva

    2012-11-01

    Full Text Available The concept of a tripartite synapse holds that astrocytes can affect both the pre- and postsynaptic compartments through the Ca2+-dependent release of gliotransmitters. Because astrocytic Ca2+ transients usually last for a few seconds, we assumed that astrocytic regulation of synaptic transmission may also occur on the scale of seconds. Here, we considered the basic physiological functions of tripartite synapses and investigated astrocytic regulation at the level of neural network activity. The firing dynamics of individual neurons in a spontaneous firing network was described by the Hodgkin-Huxley model. The neurons received excitatory synaptic input driven by the Poisson spike train with variable frequency. The mean field concentration of the released neurotransmitter was used to describe the presynaptic dynamics. The amplitudes of the excitatory postsynaptic currents (PSCs obeyed the gamma distribution law. In our model, astrocytes depressed the presynaptic release and enhanced the postsynaptic currents. As a result, low frequency synaptic input was suppressed while high frequency input was amplified. The analysis of the neuron spiking frequency as an indicator of network activity revealed that tripartite synaptic transmission dramatically changed the local network operation compared to bipartite synapses. Specifically, the astrocytes supported homeostatic regulation of the network activity by increasing or decreasing firing of the neurons. Thus, the astrocyte activation may modulate a transition of neural network into bistable regime of activity with two stable firing levels and spontaneous transitions between them.

  17. Bi-directional astrocytic regulation of neuronal activity within a network.

    Science.gov (United States)

    Gordleeva, S Yu; Stasenko, S V; Semyanov, A V; Dityatev, A E; Kazantsev, V B

    2012-01-01

    The concept of a tripartite synapse holds that astrocytes can affect both the pre- and post-synaptic compartments through the Ca(2+)-dependent release of gliotransmitters. Because astrocytic Ca(2+) transients usually last for a few seconds, we assumed that astrocytic regulation of synaptic transmission may also occur on the scale of seconds. Here, we considered the basic physiological functions of tripartite synapses and investigated astrocytic regulation at the level of neural network activity. The firing dynamics of individual neurons in a spontaneous firing network was described by the Hodgkin-Huxley model. The neurons received excitatory synaptic input driven by the Poisson spike train with variable frequency. The mean field concentration of the released neurotransmitter was used to describe the presynaptic dynamics. The amplitudes of the excitatory postsynaptic currents (PSCs) obeyed the gamma distribution law. In our model, astrocytes depressed the presynaptic release and enhanced the PSCs. As a result, low frequency synaptic input was suppressed while high frequency input was amplified. The analysis of the neuron spiking frequency as an indicator of network activity revealed that tripartite synaptic transmission dramatically changed the local network operation compared to bipartite synapses. Specifically, the astrocytes supported homeostatic regulation of the network activity by increasing or decreasing firing of the neurons. Thus, the astrocyte activation may modulate a transition of neural network into bistable regime of activity with two stable firing levels and spontaneous transitions between them.

  18. Kv3.3 Channels Bind Hax-1 and Arp2/3 to Assemble a Stable Local Actin Network that Regulates Channel Gating.

    Science.gov (United States)

    Zhang, Yalan; Zhang, Xiao-Feng; Fleming, Matthew R; Amiri, Anahita; El-Hassar, Lynda; Surguchev, Alexei A; Hyland, Callen; Jenkins, David P; Desai, Rooma; Brown, Maile R; Gazula, Valeswara-Rao; Waters, Michael F; Large, Charles H; Horvath, Tamas L; Navaratnam, Dhasakumar; Vaccarino, Flora M; Forscher, Paul; Kaczmarek, Leonard K

    2016-04-07

    Mutations in the Kv3.3 potassium channel (KCNC3) cause cerebellar neurodegeneration and impair auditory processing. The cytoplasmic C terminus of Kv3.3 contains a proline-rich domain conserved in proteins that activate actin nucleation through Arp2/3. We found that Kv3.3 recruits Arp2/3 to the plasma membrane, resulting in formation of a relatively stable cortical actin filament network resistant to cytochalasin D that inhibits fast barbed end actin assembly. These Kv3.3-associated actin structures are required to prevent very rapid N-type channel inactivation during short depolarizations of the plasma membrane. The effects of Kv3.3 on the actin cytoskeleton are mediated by the binding of the cytoplasmic C terminus of Kv3.3 to Hax-1, an anti-apoptotic protein that regulates actin nucleation through Arp2/3. A human Kv3.3 mutation within a conserved proline-rich domain produces channels that bind Hax-1 but are impaired in recruiting Arp2/3 to the plasma membrane, resulting in growth cones with deficient actin veils in stem cell-derived neurons. Copyright © 2016 Elsevier Inc. All rights reserved.

  19. Weighted Scale-Free Network Properties of Ecological Network

    International Nuclear Information System (INIS)

    Lee, Jae Woo; Maeng, Seong Eun

    2013-01-01

    We investigate the scale-free network properties of the bipartite ecological network, in particular, the plant-pollinator network. In plant-pollinator network, the pollinators visit the plant to get the nectars. In contrast to the other complex network, the plant-pollinator network has not only the trophic relationships among the interacting partners but also the complexities of the coevolutionary effects. The interactions between the plant and pollinators are beneficial relations. The plant-pollinator network is a bipartite and weighted network. The networks have two types of the nodes: plant and pollinator. We consider the visiting frequency of a pollinator to a plant as the weighting value of the link. We defined the strength of a node as the sum of the weighting value of the links. We reported the cumulative distribution function (CDF) of the degree and the strength of the plant-pollinator network. The CDF of the plants followed stretched exponential functions for both degree and strength, but the CDF of the pollinators showed the power law for both degree and strength. The average strength of the links showed the nonlinear dependence on the degree of the networks.

  20. Magnetic resonance imaging findings in bipartite medial cuneiform – a potential pitfall in diagnosis of midfoot injuries: a case series

    Directory of Open Access Journals (Sweden)

    Elias Ilan

    2008-08-01

    Full Text Available Abstract Introduction The bipartite medial cuneiform is an uncommon developmental osseous variant in the midfoot. To our knowledge, Magnetic Resonance Imaging (MRI characteristics of a non-symptomatic bipartite medial cuneiform have not been described in the orthopaedic literature. It is important for orthopaedic foot and ankle surgeons, musculoskeletal radiologists, and for podiatrists to identify this osseous variant as it may be mistakenly diagnosed as a fracture or not recognized as a source of non-traumatic or traumatic foot pain, which may sometimes even require surgical treatment. Case presentations In this report, we describe the characteristics of three cases of bipartite medial cuneiform on Magnetic Resonance Imaging and contrast its appearance to that of a medial cuneiform fracture. Conclusion A bipartite medial cuneiform is a rare developmental anomaly of the midfoot and may be the source of midfoot pain. Knowledge about its characteristic appearance on magnetic resonance imaging is important because it is a potential pitfall in diagnosis of midfoot injuries.

  1. Nuclear Import of Chromatin Remodeler Isw1 Is Mediated by Atypical Bipartite cNLS and Classical Import Pathway

    Czech Academy of Sciences Publication Activity Database

    Vašicová, Pavla; Strádalová, Vendula; Halada, Petr; Hašek, Jiří; Malcová-Janatová, Ivana

    2013-01-01

    Roč. 14, č. 2 (2013), s. 176-193 ISSN 1398-9219 R&D Projects: GA AV ČR IAA5020409; GA MŠk LC545 Institutional support: RVO:61388971 Keywords : bipartite NLS * extended linker * importin-a Subject RIV: CE - Biochemistry Impact factor: 4.714, year: 2013

  2. Distinct evolutionary histories of the DNA-A and DNA-B components of bipartite begomoviruses

    Directory of Open Access Journals (Sweden)

    Nawaz-ul-Rehman Muhammad

    2010-04-01

    Full Text Available Abstract Background Viruses of the genus Begomovirus (family Geminiviridae have genomes consisting of either one or two genomic components. The component of bipartite begomoviruses known as DNA-A is homologous to the genomes of all geminiviruses and encodes proteins required for replication, control of gene expression, overcoming host defenses, encapsidation and insect transmission. The second component, referred to as DNA-B, encodes two proteins with functions in intra- and intercellular movement in host plants. The origin of the DNA-B component remains unclear. The study described here was initiated to investigate the relationship between the DNA-A and DNA-B components of bipartite begomoviruses with a view to unraveling their evolutionary histories and providing information on the possible origin of the DNA-B component. Results Comparative phylogenetic and exhaustive pairwise sequence comparison of all DNA-A and DNA-B components of begomoviruses demonstrates that the two molecules have very distinct molecular evolutionary histories and likely are under very different evolutionary pressures. The analysis highlights that component exchange has played a far greater role in diversification of begomoviruses than previously suspected, although there are distinct differences in the apparent ability of different groups of viruses to utilize this "sexual" mechanism of genetic exchange. Additionally we explore the hypothesis that DNA-B originated as a satellite that was captured by the monopartite progenitor of all extant bipartite begomoviruses and subsequently evolved to become the integral (essential genome component that we recognize today. The situation with present-day satellites associated with begomoviruses provides some clues to the processes and selection pressures that may have led to the "domestication" of a wild progenitor of the DNA-B component. Conclusions The analysis has highlighted the greater genetic variation of DNA-B components, in

  3. Effects of benzoxazine resin on property enhancement of shape memory epoxy: A dual function of benzoxazine resin as a curing agent and a stable network segment

    Directory of Open Access Journals (Sweden)

    T. Tanpitaksit

    2015-09-01

    Full Text Available An ability of bisphenol-A/aniline based benzoxazine resin (BA-a to simultaneously acts as a curing agent and a stable or rigid network segment for shape memory epoxy, i.e. a two component system, is demonstrated. This significantly simplifies a formulation of present shape memory epoxy systems, i.e. a three or four component system. A suitable content of BA-a in the aliphatic epoxy (NGDE/polybenzoxazine (PBA-a samples for good shape memory performance is in a range of 30 to 50 mol%. The storage modulus of the obtained NGDE/PBA-a shape memory polymers (SMPs was increased from 3.57 GPa for 30 mol% BA-a content to 4.50 GPa for 50 mol% BA-a content. Glass transition temperature of the sample was also substantially increased with increasing BA-a fraction, i.e. from 51°C to 140°C. Flexural modulus and strength at room temperature of the samples at 50 mol% BA-a were found to be as high as 3.97 GPa and 132 MPa compared to the maximum values of 2.54 GPa and 100 MPa of SMP based on cyanate ester-epoxy. All samples exhibited a high value of shape fixity close to 100%. A presence of the BA-a in the samples also imparted a greater recovery stress ranging from 0.25 to 1.59 MPa. Consequently, the obtained NGDE/PBA-a copolymers are highly attractive for shape memory materials to be used in a broader range of applications particularly at elevated temperature and a higher recovery stress value.

  4. Analytic renormalized bipartite and tripartite quantum discords with quantum phase transition in XXZ spins chain

    Science.gov (United States)

    Joya, Wajid; Khan, Salman; Khalid Khan, M.; Alam, Sher

    2017-05-01

    The behavior of bipartite quantum discord (BQD) and tripartite quantum discord (TQD) in the Heisenberg XXZ spins chain is investigated with the increasing size of the system using the approach of the quantum renormalization group method. Analytical relations for both BQD and TQD are obtained and the results are checked through numerical optimization. In the thermodynamics limit, both types of discord exhibit quantum phase transition (QPT). The boundary of QPT links the phases of saturated discord and zero discord. The first derivative of both discords becomes discontinuous at the critical point, which corresponds to the second-order phase transition. Qualitatively identical, the amount of saturated BQD strongly depends on the relative positions of spins inside a block. TQD can be a better candidate than BQD both for analyzing QPT and implementing quantum information tasks. The scaling behavior in the vicinity of the critical point is discussed.

  5. Neural Correlates of Phrase Rhythm: An EEG Study of Bipartite vs. Rondo Sonata Form

    Directory of Open Access Journals (Sweden)

    Antonio Fernández-Caballero

    2017-04-01

    Full Text Available This paper introduces the neural correlates of phrase rhythm. In short, phrase rhythm is the rhythmic aspect of phrase construction and the relationships between phrases. For the sake of establishing the neural correlates, a musical experiment has been designed to induce music-evoked stimuli related to phrase rhythm. Brain activity is monitored through electroencephalography (EEG by using a brain–computer interface. The power spectral value of each EEG channel is estimated to obtain how power variance distributes as a function of frequency. Our experiment shows statistical differences in theta and alpha bands in the phrase rhythm variations of two classical sonatas, one in bipartite form and the other in rondo form.

  6. Entanglement dynamics of high-dimensional bipartite field states inside the cavities in dissipative environments

    Energy Technology Data Exchange (ETDEWEB)

    Tahira, Rabia; Ikram, Manzoor; Zubairy, M Suhail [Centre for Quantum Physics, COMSATS Institute of Information Technology, Islamabad (Pakistan); Bougouffa, Smail [Department of Physics, Faculty of Science, Taibah University, PO Box 30002, Madinah (Saudi Arabia)

    2010-02-14

    We investigate the phenomenon of sudden death of entanglement in a high-dimensional bipartite system subjected to dissipative environments with an arbitrary initial pure entangled state between two fields in the cavities. We find that in a vacuum reservoir, the presence of the state where one or more than one (two) photons in each cavity are present is a necessary condition for the sudden death of entanglement. Otherwise entanglement remains for infinite time and decays asymptotically with the decay of individual qubits. For pure two-qubit entangled states in a thermal environment, we observe that sudden death of entanglement always occurs. The sudden death time of the entangled states is related to the number of photons in the cavities, the temperature of the reservoir and the initial preparation of the entangled states.

  7. Entanglement dynamics of high-dimensional bipartite field states inside the cavities in dissipative environments

    International Nuclear Information System (INIS)

    Tahira, Rabia; Ikram, Manzoor; Zubairy, M Suhail; Bougouffa, Smail

    2010-01-01

    We investigate the phenomenon of sudden death of entanglement in a high-dimensional bipartite system subjected to dissipative environments with an arbitrary initial pure entangled state between two fields in the cavities. We find that in a vacuum reservoir, the presence of the state where one or more than one (two) photons in each cavity are present is a necessary condition for the sudden death of entanglement. Otherwise entanglement remains for infinite time and decays asymptotically with the decay of individual qubits. For pure two-qubit entangled states in a thermal environment, we observe that sudden death of entanglement always occurs. The sudden death time of the entangled states is related to the number of photons in the cavities, the temperature of the reservoir and the initial preparation of the entangled states.

  8. Stable particles

    International Nuclear Information System (INIS)

    Samios, N.P.

    1994-01-01

    I have been asked to review the subject of stable particles, essentially the particles that eventually comprised the meson and baryon octets, with a few more additions - with an emphasis on the contributions made by experiments utilizing the bubble chamber technique. In this activity, much work had been done by the photographic emulsion technique and cloud chambers - exposed to cosmic rays as well as accelerator based beams. In fact, many if not most of the stable particles were found by these latter two techniques, however, the foree of the bubble chamber (coupled with the newer and more powerful accelerators) was to verify, and reinforce with large statistics, the existence of these states, to find some of the more difficult ones, mainly neutrals and further to elucidate their properties, i.e., spin, parity, lifetimes, decay parameters, etc. (orig.)

  9. Stable particles

    International Nuclear Information System (INIS)

    Samios, N.P.

    1993-01-01

    I have been asked to review the subject of stable particles, essentially the particles that eventually comprised the meson and baryon octets. with a few more additions -- with an emphasis on the contributions made by experiments utilizing the bubble chamber technique. In this activity, much work had been done by the photographic emulsion technique and cloud chambers-exposed to cosmic rays as well as accelerator based beams. In fact, many if not most of the stable particles were found by these latter two techniques, however, the forte of the bubble chamber (coupled with the newer and more powerful accelerators) was to verify, and reinforce with large statistics, the existence of these states, to find some of the more difficult ones, mainly neutrals and further to elucidate their properties, i.e., spin, parity, lifetimes, decay parameters, etc

  10. Who Speaks for the European Border Security Industry? A Network Analysis

    NARCIS (Netherlands)

    Baird, T.E.

    2017-01-01

    This article contributes to the literature on the European border security industry with a network analysis of a new bipartite data set. The network is composed of speakers and their speech topics at a European border security conference taking place from 2008 to 2015. Speakers are linked to

  11. The network data delivery service: A real-time data connectivity system

    Science.gov (United States)

    Pardo-Castellote, Gerardo; Schneider, Stan

    1994-01-01

    A network data-sharing system, the Network Data Delivery Service (NDDS), is discussed. The NDDS system relies on a bipartite model consisting of the following: information producers (sources) and information consumers (sinks). The example provided by a dual-arm robotic system is examined.

  12. Tripartite-to-Bipartite Entanglement Transformation by Stochastic Local Operations and Classical Communication and the Structure of Matrix Spaces

    Science.gov (United States)

    Li, Yinan; Qiao, Youming; Wang, Xin; Duan, Runyao

    2018-01-01

    We study the problem of transforming a tripartite pure state to a bipartite one using stochastic local operations and classical communication (SLOCC). It is known that the tripartite-to-bipartite SLOCC convertibility is characterized by the maximal Schmidt rank of the given tripartite state, i.e. the largest Schmidt rank over those bipartite states lying in the support of the reduced density operator. In this paper, we further study this problem and exhibit novel results in both multi-copy and asymptotic settings, utilizing powerful results from the structure of matrix spaces. In the multi-copy regime, we observe that the maximal Schmidt rank is strictly super-multiplicative, i.e. the maximal Schmidt rank of the tensor product of two tripartite pure states can be strictly larger than the product of their maximal Schmidt ranks. We then provide a full characterization of those tripartite states whose maximal Schmidt rank is strictly super-multiplicative when taking tensor product with itself. Notice that such tripartite states admit strict advantages in tripartite-to-bipartite SLOCC transformation when multiple copies are provided. In the asymptotic setting, we focus on determining the tripartite-to-bipartite SLOCC entanglement transformation rate. Computing this rate turns out to be equivalent to computing the asymptotic maximal Schmidt rank of the tripartite state, defined as the regularization of its maximal Schmidt rank. Despite the difficulty caused by the super-multiplicative property, we provide explicit formulas for evaluating the asymptotic maximal Schmidt ranks of two important families of tripartite pure states by resorting to certain results of the structure of matrix spaces, including the study of matrix semi-invariants. These formulas turn out to be powerful enough to give a sufficient and necessary condition to determine whether a given tripartite pure state can be transformed to the bipartite maximally entangled state under SLOCC, in the asymptotic

  13. Tripartite-to-Bipartite Entanglement Transformation by Stochastic Local Operations and Classical Communication and the Structure of Matrix Spaces

    Science.gov (United States)

    Li, Yinan; Qiao, Youming; Wang, Xin; Duan, Runyao

    2018-03-01

    We study the problem of transforming a tripartite pure state to a bipartite one using stochastic local operations and classical communication (SLOCC). It is known that the tripartite-to-bipartite SLOCC convertibility is characterized by the maximal Schmidt rank of the given tripartite state, i.e. the largest Schmidt rank over those bipartite states lying in the support of the reduced density operator. In this paper, we further study this problem and exhibit novel results in both multi-copy and asymptotic settings, utilizing powerful results from the structure of matrix spaces. In the multi-copy regime, we observe that the maximal Schmidt rank is strictly super-multiplicative, i.e. the maximal Schmidt rank of the tensor product of two tripartite pure states can be strictly larger than the product of their maximal Schmidt ranks. We then provide a full characterization of those tripartite states whose maximal Schmidt rank is strictly super-multiplicative when taking tensor product with itself. Notice that such tripartite states admit strict advantages in tripartite-to-bipartite SLOCC transformation when multiple copies are provided. In the asymptotic setting, we focus on determining the tripartite-to-bipartite SLOCC entanglement transformation rate. Computing this rate turns out to be equivalent to computing the asymptotic maximal Schmidt rank of the tripartite state, defined as the regularization of its maximal Schmidt rank. Despite the difficulty caused by the super-multiplicative property, we provide explicit formulas for evaluating the asymptotic maximal Schmidt ranks of two important families of tripartite pure states by resorting to certain results of the structure of matrix spaces, including the study of matrix semi-invariants. These formulas turn out to be powerful enough to give a sufficient and necessary condition to determine whether a given tripartite pure state can be transformed to the bipartite maximally entangled state under SLOCC, in the asymptotic

  14. Ag-bridged Ag{sub 2}O nanowire network/TiO{sub 2} nanotube array p–n heterojunction as a highly efficient and stable visible light photocatalyst

    Energy Technology Data Exchange (ETDEWEB)

    Liu, Chengbin, E-mail: chem_cbliu@hnu.edu.cn [Key Laboratory of Jiangxi Province for Persistent Pollutants Control and Resources Recycle, Nanchang Hangkong University, Nanchang 330063 (China); State Key Laboratory of Chemo/Biosensing and Chemometrics, Hunan University, Changsha 410082 (China); Cao, Chenghao [State Key Laboratory of Chemo/Biosensing and Chemometrics, Hunan University, Changsha 410082 (China); Luo, Xubiao [Key Laboratory of Jiangxi Province for Persistent Pollutants Control and Resources Recycle, Nanchang Hangkong University, Nanchang 330063 (China); Luo, Shenglian [Key Laboratory of Jiangxi Province for Persistent Pollutants Control and Resources Recycle, Nanchang Hangkong University, Nanchang 330063 (China); State Key Laboratory of Chemo/Biosensing and Chemometrics, Hunan University, Changsha 410082 (China)

    2015-03-21

    Graphical abstract: A unique Ag-bridged Ag{sub 2}O nanowire network/TiO{sub 2} nanotube array p–n heterojunction was fabricated by simple electrochemical method. The heterostructures exhibit high photocatalytic activity and excellent recycling performance. - Highlights: • Ag-bridged Ag{sub 2}O nanowire network self-stability structure. • Ag{sub 2}O nanowire network/TiO{sub 2} nanotube p–n heterojunction. • High visible light photocatalytic activity. • Highly stable recycling performance. - Abstract: A unique Ag-bridged Ag{sub 2}O nanowire network/TiO{sub 2} nanotube array p–n heterojunction (Ag–Ag{sub 2}O/TiO{sub 2} NT) was fabricated by simple electrochemical method. Ag nanoparticles were firstly electrochemically deposited onto the surface of TiO{sub 2} NT and then were partly oxidized to Ag{sub 2}O nanowires while the rest of Ag mother nanoparticles were located at the junctions of Ag{sub 2}O nanowire network. The Ag–Ag{sub 2}O/TiO{sub 2} NT heterostructure exhibited strong visible-light response, effective separation of photogenerated carriers, and high adsorption capacity. The integration of Ag–Ag{sub 2}O self-stability structure and p–n heterojunction permitted high and stable photocatalytic activity of Ag–Ag{sub 2}O/TiO{sub 2} NT heterostructure photocatalyst. Under 140-min visible light irradiation, the photocatalytic removal efficiency of both dye acid orange 7 (AO7) and industrial chemical p-nitrophenol (PNP) over Ag–Ag{sub 2}O/TiO{sub 2} NT reached nearly 100% much higher than 17% for AO7 or 13% for PNP over bare TiO{sub 2} NT. After 5 successive cycles under 600-min simulated solar light irradiation, Ag–Ag{sub 2}O/TiO{sub 2} NT remained highly stable photocatalytic activity.

  15. Stable beams

    CERN Multimedia

    2015-01-01

    Stable beams: two simple words that carry so much meaning at CERN. When LHC page one switched from "squeeze" to "stable beams" at 10.40 a.m. on Wednesday, 3 June, it triggered scenes of jubilation in control rooms around the CERN sites, as the LHC experiments started to record physics data for the first time in 27 months. This is what CERN is here for, and it’s great to be back in business after such a long period of preparation for the next stage in the LHC adventure.   I’ve said it before, but I’ll say it again. This was a great achievement, and testimony to the hard and dedicated work of so many people in the global CERN community. I could start to list the teams that have contributed, but that would be a mistake. Instead, I’d simply like to say that an achievement as impressive as running the LHC – a machine of superlatives in every respect – takes the combined effort and enthusiasm of everyone ...

  16. Laparoscopic sleeve gastrectomy with loop bipartition: A novel metabolic operation in treating obese type II diabetes mellitus.

    Science.gov (United States)

    Mui, Wilfred Lik-Man; Lee, Danny Wai-Hung; Lam, Katherine Kar-Yee

    2014-01-01

    We report the first case of laparoscopic sleeve gastrectomy with loop bipartition (a modified form of Santoro's operation) in the treatment of type II diabetes mellitus associated with obesity. A 46-year-old gentleman (baseline BMI 32.9; BW 98.5kg) with 7-year history of type II diabetes mellitus (DM) underwent the procedure in Hong Kong. The control of DM was poor even with intensive medical therapy before the operation. Standard laparoscopic sleeve gastrectomy (SG) was performed and a loop gastroileostomy was fashioned at the antrum 250cm from the ilececal valve without division of the 1st part of duodenum after SG. The resultant gastric tube has two outlets, one to the first part of duodenum and the other to the ileum with preferential passage of food through the gastroileostomy as shown on subsequent contrast study. The patient's recovery was uneventful. The excess BMI loss was 97% with complete normalization of all metabolic parameters at 1-year follow-up. This new surgical procedure (sleeve gastrectomy with loop bipartition: SG+LB) was evolved and derived from the combined concepts of sleeve gastrectomy with transit bipartition (SG+TB), single anastomosis duodenal-ileostomy (SADI), mini-gastric bypass (MGB) and duodenal-jejunal bypass (DJB) with less nutritional and surgical complications. Sleeve gastrectomy with loop bipartition may be a very effective and simple operation to treat uncontrolled DM associated with obesity with a lot of apparent advantages over most current metabolic procedures available at the moment. Copyright © 2013 The Authors. Published by Elsevier Ltd.. All rights reserved.

  17. On finding bicliques in bipartite graphs: a novel algorithm and its application to the integration of diverse biological data types

    Science.gov (United States)

    2014-01-01

    Background Integrating and analyzing heterogeneous genome-scale data is a huge algorithmic challenge for modern systems biology. Bipartite graphs can be useful for representing relationships across pairs of disparate data types, with the interpretation of these relationships accomplished through an enumeration of maximal bicliques. Most previously-known techniques are generally ill-suited to this foundational task, because they are relatively inefficient and without effective scaling. In this paper, a powerful new algorithm is described that produces all maximal bicliques in a bipartite graph. Unlike most previous approaches, the new method neither places undue restrictions on its input nor inflates the problem size. Efficiency is achieved through an innovative exploitation of bipartite graph structure, and through computational reductions that rapidly eliminate non-maximal candidates from the search space. An iterative selection of vertices for consideration based on non-decreasing common neighborhood sizes boosts efficiency and leads to more balanced recursion trees. Results The new technique is implemented and compared to previously published approaches from graph theory and data mining. Formal time and space bounds are derived. Experiments are performed on both random graphs and graphs constructed from functional genomics data. It is shown that the new method substantially outperforms the best previous alternatives. Conclusions The new method is streamlined, efficient, and particularly well-suited to the study of huge and diverse biological data. A robust implementation has been incorporated into GeneWeaver, an online tool for integrating and analyzing functional genomics experiments, available at http://geneweaver.org. The enormous increase in scalability it provides empowers users to study complex and previously unassailable gene-set associations between genes and their biological functions in a hierarchical fashion and on a genome-wide scale. This practical

  18. Wnt-mediated repression via bipartite DNA recognition by TCF in the Drosophila hematopoietic system.

    Directory of Open Access Journals (Sweden)

    Chen U Zhang

    2014-08-01

    Full Text Available The Wnt/β-catenin signaling pathway plays many important roles in animal development, tissue homeostasis and human disease. Transcription factors of the TCF family mediate many Wnt transcriptional responses, promoting signal-dependent activation or repression of target gene expression. The mechanism of this specificity is poorly understood. Previously, we demonstrated that for activated targets in Drosophila, TCF/Pangolin (the fly TCF recognizes regulatory DNA through two DNA binding domains, with the High Mobility Group (HMG domain binding HMG sites and the adjacent C-clamp domain binding Helper sites. Here, we report that TCF/Pangolin utilizes a similar bipartite mechanism to recognize and regulate several Wnt-repressed targets, but through HMG and Helper sites whose sequences are distinct from those found in activated targets. The type of HMG and Helper sites is sufficient to direct activation or repression of Wnt regulated cis-regulatory modules, and protease digestion studies suggest that TCF/Pangolin adopts distinct conformations when bound to either HMG-Helper site pair. This repressive mechanism occurs in the fly lymph gland, the larval hematopoietic organ, where Wnt/β-catenin signaling controls prohemocytic differentiation. Our study provides a paradigm for direct repression of target gene expression by Wnt/β-catenin signaling and allosteric regulation of a transcription factor by DNA.

  19. Integration of Phenotypic Metadata and Protein Similarity in Archaea Using a Spectral Bipartitioning Approach

    Energy Technology Data Exchange (ETDEWEB)

    Hooper, Sean D.; Anderson, Iain J; Pati, Amrita; Dalevi, Daniel; Mavromatis, Konstantinos; Kyrpides, Nikos C

    2009-01-01

    In order to simplify and meaningfully categorize large sets of protein sequence data, it is commonplace to cluster proteins based on the similarity of those sequences. However, it quickly becomes clear that the sequence flexibility allowed a given protein varies significantly among different protein families. The degree to which sequences are conserved not only differs for each protein family, but also is affected by the phylogenetic divergence of the source organisms. Clustering techniques that use similarity thresholds for protein families do not always allow for these variations and thus cannot be confidently used for applications such as automated annotation and phylogenetic profiling. In this work, we applied a spectral bipartitioning technique to all proteins from 53 archaeal genomes. Comparisons between different taxonomic levels allowed us to study the effects of phylogenetic distances on cluster structure. Likewise, by associating functional annotations and phenotypic metadata with each protein, we could compare our protein similarity clusters with both protein function and associated phenotype. Our clusters can be analyzed graphically and interactively online.

  20. Computing Maximum Cardinality Matchings in Parallel on Bipartite Graphs via Tree-Grafting

    International Nuclear Information System (INIS)

    Azad, Ariful; Buluc, Aydn; Pothen, Alex

    2016-01-01

    It is difficult to obtain high performance when computing matchings on parallel processors because matching algorithms explicitly or implicitly search for paths in the graph, and when these paths become long, there is little concurrency. In spite of this limitation, we present a new algorithm and its shared-memory parallelization that achieves good performance and scalability in computing maximum cardinality matchings in bipartite graphs. This algorithm searches for augmenting paths via specialized breadth-first searches (BFS) from multiple source vertices, hence creating more parallelism than single source algorithms. Algorithms that employ multiple-source searches cannot discard a search tree once no augmenting path is discovered from the tree, unlike algorithms that rely on single-source searches. We describe a novel tree-grafting method that eliminates most of the redundant edge traversals resulting from this property of multiple-source searches. We also employ the recent direction-optimizing BFS algorithm as a subroutine to discover augmenting paths faster. Our algorithm compares favorably with the current best algorithms in terms of the number of edges traversed, the average augmenting path length, and the number of iterations. Here, we provide a proof of correctness for our algorithm. Our NUMA-aware implementation is scalable to 80 threads of an Intel multiprocessor and to 240 threads on an Intel Knights Corner coprocessor. On average, our parallel algorithm runs an order of magnitude faster than the fastest algorithms available. The performance improvement is more significant on graphs with small matching number.

  1. Simple sequence repeats and compositional bias in the bipartite Ralstonia solanacearum GMI1000 genome

    Directory of Open Access Journals (Sweden)

    Vandamme Peter

    2003-03-01

    Full Text Available Abstract Background Ralstonia solanacearum is an important plant pathogen. The genome of R. solananearum GMI1000 is organised into two replicons (a 3.7-Mb chromosome and a 2.1-Mb megaplasmid and this bipartite genome structure is characteristic for most R. solanacearum strains. To determine whether the megaplasmid was acquired via recent horizontal gene transfer or is part of an ancestral single chromosome, we compared the abundance, distribution and compositon of simple sequence repeats (SSRs between both replicons and also compared the respective compositional biases. Results Our data show that both replicons are very similar in respect to distribution and composition of SSRs and presence of compositional biases. Minor variations in SSR and compositional biases observed may be attributable to minor differences in gene expression and regulation of gene expression or can be attributed to the small sample numbers observed. Conclusions The observed similarities indicate that both replicons have shared a similar evolutionary history and thus suggest that the megaplasmid was not recently acquired from other organisms by lateral gene transfer but is a part of an ancestral R. solanacearum chromosome.

  2. Improving information filtering via network manipulation

    Science.gov (United States)

    Zhang, Fuguo; Zeng, An

    2012-12-01

    The recommender system is a very promising way to address the problem of overabundant information for online users. Although the information filtering for the online commercial systems has received much attention recently, almost all of the previous works are dedicated to design new algorithms and consider the user-item bipartite networks as given and constant information. However, many problems for recommender systems such as the cold-start problem (i.e., low recommendation accuracy for the small-degree items) are actually due to the limitation of the underlying user-item bipartite networks. In this letter, we propose a strategy to enhance the performance of the already existing recommendation algorithms by directly manipulating the user-item bipartite networks, namely adding some virtual connections to the networks. Numerical analyses on two benchmark data sets, MovieLens and Netflix, show that our method can remarkably improves the recommendation performance. Specifically, it not only improves the recommendations accuracy (especially for the small-degree items), but also helps the recommender systems generate more diverse and novel recommendations.

  3. Graph Based Models for Unsupervised High Dimensional Data Clustering and Network Analysis

    Science.gov (United States)

    2015-01-01

    discussion of its application to the network of network scientists. Each partitioning step in this spectral scheme either bipartitions or tripartitions a...University of California Los Angeles Graph Based Models for Unsupervised High Dimensional Data Clustering and Network Analysis A dissertation...00-00-2015 to 00-00-2015 4. TITLE AND SUBTITLE Graph Based Models for Unsupervised High Dimensional Data Clustering and Network Analysis 5a

  4. The effect of habitat modification on plant-pollinator network

    Science.gov (United States)

    Aminatun, Tien; Putra, Nugroho Susetya

    2017-08-01

    The research aimed to determine; (1) the mutualism interaction pattern of plant-pollinator on several habitat modifications; and (2) the habitat modification which showed the most stable pattern of interaction. The study was conducted in one planting season with 20 plots which each plot had 2x2 m2 width and 2 m spacing among plots, and each plot was planted with the same variety of tomato plants, i.e. "intan". Nitrogen manipulation treatment was conducted with four kinds of fertilizers, i.e. NPK (code PU), compost (code PKM), vermicompost (code PC), and manure (code PK). Each treatment had 5 plot replications. We observed the growth of tomato plants, weed and arthropod populationstwo weekly while pollinator visitation twice a week during tomato plant flowering with counting population and visitation frequence of each pollinator on each sample of tomato plants. The nectar of tomato plant flower of each treatment was tested in laboratory to see its reducing sugar and sucrose. Oganic matter and nitrogen of the soil samples of each treatment were tested in laboratory in the beginning and the end of this research. We analized the plant-pollinator network with bipartite program in R-statistics, and the abiotic and other biotic factors with descriptive analysis. The results of the research were; (1) the mutualism interaction pattern of plant-pollinator network of four treatments were varied, and (2) The pattern of plant-pollinator network of NPK fertilizer treatment showed the more stable interaction based on analysis of interaction evenness, Shannon diversity, frequency and longevity of pollinator visitation.

  5. Can opinion be stable in an open network with hierarchy? An agent-based model of the Commercial Court of Paris

    OpenAIRE

    Rouchier, Juliette; Tubaro, Paola

    2011-01-01

    The co-evolution of social networks and opinion formation has received increasing attention in recent years. As a contribution to the growing literature on this topic, we explore connections between empirical data representing the advice network of judges at the Commercial Court in Paris and an agent-based simulation protocol testing various hypotheses on the motives that drive agent behaviors. A previous work (Rouchier et al. 2007) had already modeled the dynamics of advice-seeking among jud...

  6. The family Rhabdoviridae: Mono- and bipartite negative-sense RNA viruses with diverse genome organization and common evolutionary origins

    Science.gov (United States)

    Dietzgen, Ralf G.; Kondo, Hideki; Goodin, Michael M.; Kurath, Gael; Vasilakis, Nikos

    2017-01-01

    The family Rhabdoviridae consists of mostly enveloped, bullet-shaped or bacilliform viruses with a negative-sense, single-stranded RNA genome that infect vertebrates, invertebrates or plants. This ecological diversity is reflected by the diversity and complexity of their genomes. Five canonical structural protein genes are conserved in all rhabdoviruses, but may be overprinted, overlapped or interspersed with several novel and diverse accessory genes. This review gives an overview of the characteristics and diversity of rhabdoviruses, their taxonomic classification, replication mechanism, properties of classical rhabdoviruses such as rabies virus and rhabdoviruses with complex genomes, rhabdoviruses infecting aquatic species, and plant rhabdoviruses with both mono- and bipartite genomes.

  7. Networking

    OpenAIRE

    Rauno Lindholm, Daniel; Boisen Devantier, Lykke; Nyborg, Karoline Lykke; Høgsbro, Andreas; Fries, de; Skovlund, Louise

    2016-01-01

    The purpose of this project was to examine what influencing factor that has had an impact on the presumed increasement of the use of networking among academics on the labour market and how it is expressed. On the basis of the influence from globalization on the labour market it can be concluded that the globalization has transformed the labour market into a market based on the organization of networks. In this new organization there is a greater emphasis on employees having social qualificati...

  8. Tensor network models of multiboundary wormholes

    Science.gov (United States)

    Peach, Alex; Ross, Simon F.

    2017-05-01

    We study the entanglement structure of states dual to multiboundary wormhole geometries using tensor network models. Perfect and random tensor networks tiling the hyperbolic plane have been shown to provide good models of the entanglement structure in holography. We extend this by quotienting the plane by discrete isometries to obtain models of the multiboundary states. We show that there are networks where the entanglement structure is purely bipartite, extending results obtained in the large temperature limit. We analyse the entanglement structure in a range of examples.

  9. Ranking species in mutualistic networks

    Science.gov (United States)

    Domínguez-García, Virginia; Muñoz, Miguel A.

    2015-02-01

    Understanding the architectural subtleties of ecological networks, believed to confer them enhanced stability and robustness, is a subject of outmost relevance. Mutualistic interactions have been profusely studied and their corresponding bipartite networks, such as plant-pollinator networks, have been reported to exhibit a characteristic ``nested'' structure. Assessing the importance of any given species in mutualistic networks is a key task when evaluating extinction risks and possible cascade effects. Inspired in a recently introduced algorithm -similar in spirit to Google's PageRank but with a built-in non-linearity- here we propose a method which -by exploiting their nested architecture- allows us to derive a sound ranking of species importance in mutualistic networks. This method clearly outperforms other existing ranking schemes and can become very useful for ecosystem management and biodiversity preservation, where decisions on what aspects of ecosystems to explicitly protect need to be made.

  10. On the interconnection of stable protein complexes: inter-complex hubs and their conservation in Saccharomyces cerevisiae and Homo sapiens networks.

    Science.gov (United States)

    Guerra, Concettina

    2015-01-01

    Protein complexes are key molecular entities that perform a variety of essential cellular functions. The connectivity of proteins within a complex has been widely investigated with both experimental and computational techniques. We developed a computational approach to identify and characterise proteins that play a role in interconnecting complexes. We computed a measure of inter-complex centrality, the crossroad index, based on disjoint paths connecting proteins in distinct complexes and identified inter-complex hubs as proteins with a high value of the crossroad index. We applied the approach to a set of stable complexes in Saccharomyces cerevisiae and in Homo sapiens. Just as done for hubs, we evaluated the topological and biological properties of inter-complex hubs addressing the following questions. Do inter-complex hubs tend to be evolutionary conserved? What is the relation between crossroad index and essentiality? We found a good correlation between inter-complex hubs and both evolutionary conservation and essentiality.

  11. Nuclear import of chromatin remodeler Isw1 is mediated by atypical bipartite cNLS and classical import pathway.

    Science.gov (United States)

    Vasicova, Pavla; Stradalova, Vendula; Halada, Petr; Hasek, Jiri; Malcova, Ivana

    2013-02-01

    The protein Isw1 of Saccharomyces cerevisiae is an imitation-switch chromatin-remodeling factor. We studied the mechanisms of its nuclear import and found that the nuclear localization signal (NLS) mediating the transport of Isw1 into the nucleus is located at the end of the C-terminus of the protein (aa1079-1105). We show that it is an atypical bipartite signal with an unconventional linker of 19 aa (KRIR X(19) KKAK) and the only nuclear targeting signal within the Isw1 molecule. The efficiency of Isw1 nuclear import was found to be modulated by changes to the amino acid composition in the vicinity of the KRIR motif, but not by the linker length. Live-cell imaging of various karyopherin mutants and in vitro binding assays of Isw1NLS to importin-α revealed that the nuclear translocation of Isw1 is mediated by the classical import pathway. Analogous motifs to Isw1NLS are highly conserved in Isw1 homologues of other yeast species, and putative bipartite cNLS were identified in silico at the end of the C-termini of imitation switch (ISWI) proteins from higher eukaryotes. We suggest that the C-termini of the ISWI family proteins play an important role in their nuclear import. © 2012 John Wiley & Sons A/S.

  12. Maximal violation of a bipartite three-setting, two-outcome Bell inequality using infinite-dimensional quantum systems

    International Nuclear Information System (INIS)

    Pal, Karoly F.; Vertesi, Tamas

    2010-01-01

    The I 3322 inequality is the simplest bipartite two-outcome Bell inequality beyond the Clauser-Horne-Shimony-Holt (CHSH) inequality, consisting of three two-outcome measurements per party. In the case of the CHSH inequality the maximal quantum violation can already be attained with local two-dimensional quantum systems; however, there is no such evidence for the I 3322 inequality. In this paper a family of measurement operators and states is given which enables us to attain the maximum quantum value in an infinite-dimensional Hilbert space. Further, it is conjectured that our construction is optimal in the sense that measuring finite-dimensional quantum systems is not enough to achieve the true quantum maximum. We also describe an efficient iterative algorithm for computing quantum maximum of an arbitrary two-outcome Bell inequality in any given Hilbert space dimension. This algorithm played a key role in obtaining our results for the I 3322 inequality, and we also applied it to improve on our previous results concerning the maximum quantum violation of several bipartite two-outcome Bell inequalities with up to five settings per party.

  13. Controlling transfer of quantum correlations among bi-partitions of a composite quantum system by combining different noisy environments

    International Nuclear Information System (INIS)

    Zhang Xiu-Xing; Li Fu-Li

    2011-01-01

    The correlation dynamics are investigated for various bi-partitions of a composite quantum system consisting of two qubits and two independent and non-identical noisy environments. The two qubits have no direct interaction with each other and locally interact with their environments. Classical and quantum correlations including the entanglement are initially prepared only between the two qubits. We find that contrary to the identical noisy environment case, the quantum correlation transfer direction can be controlled by combining different noisy environments. The amplitude-damping environment determines whether there exists the entanglement transfer among bi-partitions of the system. When one qubit is coupled to an amplitude-damping environment and the other one to a bit-flip one, we find a very interesting result that all the quantum and the classical correlations, and even the entanglement, originally existing between the qubits, can be completely transferred without any loss to the qubit coupled to the bit-flit environment and the amplitude-damping environment. We also notice that it is possible to distinguish the quantum correlation from the classical correlation and the entanglement by combining different noisy environments. (general)

  14. Stable Isotope Data

    Data.gov (United States)

    National Oceanic and Atmospheric Administration, Department of Commerce — Tissue samples (skin, bone, blood, muscle) are analyzed for stable carbon, stable nitrogen, and stable sulfur analysis. Many samples are used in their entirety for...

  15. Topology of the Erasmus student mobility network

    Science.gov (United States)

    Derzsi, A.; Derzsy, N.; Káptalan, E.; Néda, Z.

    2011-07-01

    The collaboration network generated by the Erasmus student mobilities in the year 2003 is analyzed and modeled. Nodes of this bipartite network are European universities and links are the Erasmus mobilities between these universities. This network is a complex directed and weighted graph. The non-directed and non-weighted projection of this network does not exhibit a scale-free nature, but proves to be a small-word type random network with a giant component. The connectivity data indicates an exponential degree distribution, a relatively high clustering coefficient and a small radius. It can be easily modeled by using a simple configuration model and arguing the exponential degree distribution. The weighted and directed version of the network can also be described by means of simple random network models.

  16. Tibial Tubercle Fracture in a 14-Year-Old Athlete with Bilateral Lower Pole Bipartite Patella and Osgood-Schlatter Disease

    Directory of Open Access Journals (Sweden)

    Fabio Pascarella

    2015-01-01

    Full Text Available We present a case of tibial tubercle fracture in a young male athlete with both bilateral bipartite patella at the lower pole (Saupe type I and Osgood-Schlatter disease. Open reduction and internal fixation were performed to restore the extensor mechanism of the knee.

  17. Tibial tubercle fracture in a 14-year-old athlete with bilateral lower pole bipartite patella and osgood-schlatter disease.

    Science.gov (United States)

    Pascarella, Fabio; Ziranu, Antonio; Maccauro, Giulio

    2015-01-01

    We present a case of tibial tubercle fracture in a young male athlete with both bilateral bipartite patella at the lower pole (Saupe type I) and Osgood-Schlatter disease. Open reduction and internal fixation were performed to restore the extensor mechanism of the knee.

  18. Stable convergence and stable limit theorems

    CERN Document Server

    Häusler, Erich

    2015-01-01

    The authors present a concise but complete exposition of the mathematical theory of stable convergence and give various applications in different areas of probability theory and mathematical statistics to illustrate the usefulness of this concept. Stable convergence holds in many limit theorems of probability theory and statistics – such as the classical central limit theorem – which are usually formulated in terms of convergence in distribution. Originated by Alfred Rényi, the notion of stable convergence is stronger than the classical weak convergence of probability measures. A variety of methods is described which can be used to establish this stronger stable convergence in many limit theorems which were originally formulated only in terms of weak convergence. Naturally, these stronger limit theorems have new and stronger consequences which should not be missed by neglecting the notion of stable convergence. The presentation will be accessible to researchers and advanced students at the master's level...

  19. Effect of two-qutrit entanglement on quantum speed limit time of a bipartite V-type open system

    Energy Technology Data Exchange (ETDEWEB)

    Behzadi, N., E-mail: n.behzadi@tabrizu.ac.ir [Research Institute for Fundamental Sciences, University of Tabriz (Iran, Islamic Republic of); Ahansaz, B.; Ektesabi, A.; Faizi, E. [Physics Department, Azarbaijan Shahid Madani University, Tabriz (Iran, Islamic Republic of)

    2017-03-15

    In the present paper, quantum speed limit (QSL) time of a bipartite V-type three-level atomic system under the effect of two-qutrit entanglement is investigated. Each party interacts with own independent reservoir. By considering two local unitarily equivalent Werner states and the Horodecki PPT state, as initial states, the QSL time is evaluated for each of them in the respective entangled regions. It is counterintuitively observed that the effect of entanglement on the QSL time driven from each of the initial Werner states are completely different when the degree of non-Markovianity is considerable. In addition, it is interesting that the effect of entanglement of the non-equivalent Horodecki state on the calculated QSL time displays an intermediate behavior relative to the cases obtained for the Werner states.

  20. Effect of two-qutrit entanglement on quantum speed limit time of a bipartite V-type open system

    Science.gov (United States)

    Behzadi, N.; Ahansaz, B.; Ektesabi, A.; Faizi, E.

    2017-03-01

    In the present paper, quantum speed limit (QSL) time of a bipartite V-type three-level atomic system under the effect of two-qutrit entanglement is investigated. Each party interacts with own independent reservoir. By considering two local unitarily equivalent Werner states and the Horodecki PPT state, as initial states, the QSL time is evaluated for each of them in the respective entangled regions. It is counterintuitively observed that the effect of entanglement on the QSL time driven from each of the initial Werner states are completely different when the degree of non-Markovianity is considerable. In addition, it is interesting that the effect of entanglement of the non-equivalent Horodecki state on the calculated QSL time displays an intermediate behavior relative to the cases obtained for the Werner states.

  1. stableGP

    Data.gov (United States)

    National Aeronautics and Space Administration — The code in the stableGP package implements Gaussian process calculations using efficient and numerically stable algorithms. Description of the algorithms is in the...

  2. Dynamic motifs in socio-economic networks

    Science.gov (United States)

    Zhang, Xin; Shao, Shuai; Stanley, H. Eugene; Havlin, Shlomo

    2014-12-01

    Socio-economic networks are of central importance in economic life. We develop a method of identifying and studying motifs in socio-economic networks by focusing on “dynamic motifs,” i.e., evolutionary connection patterns that, because of “node acquaintances” in the network, occur much more frequently than random patterns. We examine two evolving bi-partite networks: i) the world-wide commercial ship chartering market and ii) the ship build-to-order market. We find similar dynamic motifs in both bipartite networks, even though they describe different economic activities. We also find that “influence” and “persistence” are strong factors in the interaction behavior of organizations. When two companies are doing business with the same customer, it is highly probable that another customer who currently only has business relationship with one of these two companies, will become customer of the second in the future. This is the effect of influence. Persistence means that companies with close business ties to customers tend to maintain their relationships over a long period of time.

  3. Stable chaos in fluctuation driven neural circuits

    International Nuclear Information System (INIS)

    Angulo-Garcia, David; Torcini, Alessandro

    2014-01-01

    Highlights: • Nonlinear instabilities in fluctuation driven (balanced) neural circuits are studied. • Balanced networks display chaos and stable phases at different post-synaptic widths. • Linear instabilities coexists with nonlinear ones in the chaotic regime. • Erratic motion appears also in linearly stable phase due to stable chaos. - Abstract: We study the dynamical stability of pulse coupled networks of leaky integrate-and-fire neurons against infinitesimal and finite perturbations. In particular, we compare mean versus fluctuations driven networks, the former (latter) is realized by considering purely excitatory (inhibitory) sparse neural circuits. In the excitatory case the instabilities of the system can be completely captured by an usual linear stability (Lyapunov) analysis, whereas the inhibitory networks can display the coexistence of linear and nonlinear instabilities. The nonlinear effects are associated to finite amplitude instabilities, which have been characterized in terms of suitable indicators. For inhibitory coupling one observes a transition from chaotic to non chaotic dynamics by decreasing the pulse-width. For sufficiently fast synapses the system, despite showing an erratic evolution, is linearly stable, thus representing a prototypical example of stable chaos

  4. Evidence for a bi-partition of the Younger Dryas Stadial in East Asia associated with inversed climate characteristics compared to Europe

    OpenAIRE

    Schlolaut Gordon; Brauer Achim; Nakagawa Takeshi; Lamb Henry F; Tyler Jonathan J; Staff Richard A; Marshall Michael H; Bronk Ramsey Christopher; Bryant Charlotte L; Tarasov Pavel E

    2017-01-01

    The Younger Dryas Stadial (YDS) was an episode of northern hemispheric cooling which occurred within the Last Glacial Interglacial Transition (LGIT). A major driver for the YDS climate was a weakening of the Atlantic Meridional Overturning Circulation (AMOC). It has been inferred that the AMOC began to strengthen mid-YDS, producing a bipartite structure of the YDS in records from continental Europe. These records imply that the polar front and westerlies shifted northward, producing a warmer ...

  5. Evidence for a bi-partition of the Younger Dryas Stadial in East Asia associated with inversed climate characteristics compared to Europe

    Science.gov (United States)

    Schlolaut, Gordon; Brauer, Achim; Nakagawa, Takeshi; Lamb, Henry F.; Tyler, Jonathan J.; Staff, Richard A.; Marshall, Michael H.; Bronk Ramsey, Christopher; Bryant, Charlotte L.; Tarasov, Pavel E.

    2017-01-01

    The Younger Dryas Stadial (YDS) was an episode of northern hemispheric cooling which occurred within the Last Glacial Interglacial Transition (LGIT). A major driver for the YDS climate was a weakening of the Atlantic Meridional Overturning Circulation (AMOC). It has been inferred that the AMOC began to strengthen mid-YDS, producing a bipartite structure of the YDS in records from continental Europe. These records imply that the polar front and westerlies shifted northward, producing a warmer second phase of the YDS in Europe. Here we present multi-proxy data from the sediments of Lake Suigetsu (Japan), as evidence that a related bi-partition of the YDS also occurred in East Asia. Besides showing for the first time that the bi-partition was not limited to the North Atlantic/European region, the data also imply a climatic dipole between Europe and East Asia since the cold-warm characteristics are reversed at Lake Suigetsu. We suggest that changes in eastward moisture transport from the North Atlantic are the primary mechanism by which the teleconnection can be explained. PMID:28361872

  6. Performance of ectomycorrhizal alders exposed to specific Canadian oil sands tailing stressors under in vivo bipartite symbiotic conditions.

    Science.gov (United States)

    Beaudoin-Nadeau, Martin; Gagné, André; Bissonnette, Cyntia; Bélanger, Pier-Anne; Fortin, J André; Roy, Sébastien; Greer, Charles W; Khasa, Damase P

    2016-07-01

    Canadian oil sands tailings are predominately sodic residues contaminated by hydrocarbons such as naphthenic acids. These conditions are harsh for plant development. In this study, we evaluated the effect of inoculating roots of Alnus viridis ssp. crispa and Alnus incana ssp. rugosa with ectomycorrhizal fungi in the presence of tailings compounds. Seedlings were inoculated with 7 different strains of Paxillus involutus and Alpova diplophloeus and were grown under different treatments of NaCl, Na2SO4, and naphthenic acids in a growth chamber. Afterwards, seedling survival, height, dry biomass, leaf necrosis, and root mycorrhization rate were measured. Paxillus involutus Mai was the most successful strain in enhancing alder survival, health, and growth. Seedlings inoculated with this strain displayed a 25% increase in survival rate, 2-fold greater biomass, and 2-fold less leaf necrosis compared with controls. Contrary to our expectations, A. diplophloeus was not as effective as P. involutus in improving seedling fitness, likely because it did not form ectomycorrhizae on roots of either alder species. High intraspecific variation characterized strains of P. involutus in their ability to stimulate alder height and growth and to minimize leaf necrosis. We conclude that in vivo selection under bipartite symbiotic conditions is essential to select effective strains that will be of use for the revegetation and reclamation of derelict lands.

  7. Political Obstacles to Regionalization of the SUS: perceptions of Municipal Health Secretaries with seat in the Bipartite Interagency Commissions.

    Science.gov (United States)

    Moreira, Marcelo Rasga; Ribeiro, José Mendes; Ouverney, Assis Mafort

    2017-04-01

    This paper aims to identify and analyze the political obstacles to the implementation of Organizational Contract of Public Action (COAP) based on the perceptions of municipal health secretaries of Bipartite Interagency Commissions (CIB). For this purpose, we interviewed 195 secretaries (92% of the total) from October 2015 to August 2016. Based on the approach of policy analysis, the main hurdles identified were, in short, a traditional obstacle (lack of resources), one that has been gaining strength in recent years (judicialization of politics) and another, perhaps unheard of: the party-political system and the State Executive Branch are the great absentees in the coalitions in support of SUS regionalization policies. We can conclude that such obstacles indicate an extremely negative setting for the implementation of the COAP and other SUS regionalization policies. Thus, it is incumbent upon those involved to reflect, negotiate and build consensus on improving the health of the population and overcome such obstacles if, of course, they embrace the authors' concept that regionalization is fundamental for the SUS.

  8. Stable isotopes labelled compounds

    International Nuclear Information System (INIS)

    1982-09-01

    The catalogue on stable isotopes labelled compounds offers deuterium, nitrogen-15, and multiply labelled compounds. It includes: (1) conditions of sale and delivery, (2) the application of stable isotopes, (3) technical information, (4) product specifications, and (5) the complete delivery programme

  9. Stable Boundary Layer Issues

    NARCIS (Netherlands)

    Steeneveld, G.J.

    2012-01-01

    Understanding and prediction of the stable atmospheric boundary layer is a challenging task. Many physical processes are relevant in the stable boundary layer, i.e. turbulence, radiation, land surface coupling, orographic turbulent and gravity wave drag, and land surface heterogeneity. The

  10. Evolutionary Stable Strategy

    Indian Academy of Sciences (India)

    IAS Admin

    After Maynard-Smith and Price [1] mathematically derived why a given behaviour or strategy was adopted by a certain proportion of the population at a given time, it was shown that a strategy which is currently stable in a population need not be stable in evolutionary time (across generations). Additionally it was sug-.

  11. Network nestedness as generalized core-periphery structures.

    Science.gov (United States)

    Lee, Sang Hoon

    2016-02-01

    The concept of nestedness, in particular for ecological and economical networks, has been introduced as a structural characteristic of real interacting systems. We suggest that the nestedness is in fact another way to express a mesoscale network property called the core-periphery structure. With real ecological mutualistic networks and synthetic model networks, we reveal the strong correlation between the nestedness and core-periphery-ness (likeness to the core-periphery structure), by defining the network-level measures for nestedness and core-periphery-ness in the case of weighted and bipartite networks. However, at the same time, via more sophisticated null-model analysis, we also discover that the degree (the number of connected neighbors of a node) distribution poses quite severe restrictions on the possible nestedness and core-periphery parameter space. Therefore, there must exist structurally interwoven properties in more fundamental levels of network formation, behind this seemingly obvious relation between nestedness and core-periphery structures.

  12. On the Control of Consensus Networks: Theory and Applications

    Science.gov (United States)

    Hudoba de Badyn, Mathias

    Signed networks allow the study of positive and negative interactions between agents. In this thesis, three papers are presented that address controllability of networked dynamics. First, controllability of signed consensus networks is approached from a symmetry perspective, for both linear and nonlinear consensus protocols. It is shown that the graph-theoretic property of signed networks known as structural balance renders the consensus protocol uncontrollable when coupled with a certain type of symmetry. Stabilizability and output controllability of signed linear consensus is also examined, as well as a data-driven approach to finding bipartite consensus stemming from structural balance for signed nonlinear consensus. Second, an algorithm is constructed that allows one to grow a network while preserving controllability, and some generalizations of this algorithm are presented. Submodular optimization is used to analyze a second algorithm that adds nodes to a network to maximize the network connectivity.

  13. Optimal path for a quantum teleportation protocol in entangled networks

    Science.gov (United States)

    di Franco, C.; Ballester, D.

    2012-01-01

    Bellman's optimality principle has been of enormous importance in the development of whole branches of applied mathematics, computer science, optimal control theory, economics, decision making, and classical physics. Examples are numerous: dynamic programming, Markov chains, stochastic dynamics, calculus of variations, and the brachistochrone problem. Here we show that Bellman's optimality principle is violated in a teleportation problem on a quantum network. This implies that finding the optimal fidelity route for teleporting a quantum state between two distant nodes on a quantum network with bipartite entanglement will be a tough problem and will require further investigation.

  14. A reconsideration of negative ratings for network-based recommendation

    Science.gov (United States)

    Hu, Liang; Ren, Liang; Lin, Wenbin

    2018-01-01

    Recommendation algorithms based on bipartite networks have become increasingly popular, thanks to their accuracy and flexibility. Currently, many of these methods ignore users' negative ratings. In this work, we propose a method to exploit negative ratings for the network-based inference algorithm. We find that negative ratings play a positive role regardless of sparsity of data sets. Furthermore, we improve the efficiency of our method and compare it with the state-of-the-art algorithms. Experimental results show that the present method outperforms the existing algorithms.

  15. Normal modified stable processes

    DEFF Research Database (Denmark)

    Barndorff-Nielsen, Ole Eiler; Shephard, N.

    2002-01-01

    This paper discusses two classes of distributions, and stochastic processes derived from them: modified stable (MS) laws and normal modified stable (NMS) laws. This extends corresponding results for the generalised inverse Gaussian (GIG) and generalised hyperbolic (GH) or normal generalised inverse...... Gaussian (NGIG) laws. The wider framework thus established provides, in particular, for added flexibility in the modelling of the dynamics of financial time series, of importance especially as regards OU based stochastic volatility models for equities. In the special case of the tempered stable OU process...

  16. Applications of stable isotopes

    International Nuclear Information System (INIS)

    Letolle, R.; Mariotti, A.; Bariac, T.

    1991-06-01

    This report reviews the historical background and the properties of stable isotopes, the methods used for their measurement (mass spectrometry and others), the present technics for isotope enrichment and separation, and at last the various present and foreseeable application (in nuclear energy, physical and chemical research, materials industry and research; tracing in industrial, medical and agronomical tests; the use of natural isotope variations for environmental studies, agronomy, natural resources appraising: water, minerals, energy). Some new possibilities in the use of stable isotope are offered. A last chapter gives the present state and forecast development of stable isotope uses in France and Europe

  17. Computationally Efficient Nonlinear Bell Inequalities for Quantum Networks

    Science.gov (United States)

    Luo, Ming-Xing

    2018-04-01

    The correlations in quantum networks have attracted strong interest with new types of violations of the locality. The standard Bell inequalities cannot characterize the multipartite correlations that are generated by multiple sources. The main problem is that no computationally efficient method is available for constructing useful Bell inequalities for general quantum networks. In this work, we show a significant improvement by presenting new, explicit Bell-type inequalities for general networks including cyclic networks. These nonlinear inequalities are related to the matching problem of an equivalent unweighted bipartite graph that allows constructing a polynomial-time algorithm. For the quantum resources consisting of bipartite entangled pure states and generalized Greenberger-Horne-Zeilinger (GHZ) states, we prove the generic nonmultilocality of quantum networks with multiple independent observers using new Bell inequalities. The violations are maximal with respect to the presented Tsirelson's bound for Einstein-Podolsky-Rosen states and GHZ states. Moreover, these violations hold for Werner states or some general noisy states. Our results suggest that the presented Bell inequalities can be used to characterize experimental quantum networks.

  18. Investigating Einstein-Podolsky-Rosen steering of continuous-variable bipartite states by non-Gaussian pseudospin measurements

    Science.gov (United States)

    Xiang, Yu; Xu, Buqing; Mišta, Ladislav; Tufarelli, Tommaso; He, Qiongyi; Adesso, Gerardo

    2017-10-01

    Einstein-Podolsky-Rosen (EPR) steering is an asymmetric form of correlations which is intermediate between quantum entanglement and Bell nonlocality, and can be exploited as a resource for quantum communication with one untrusted party. In particular, steering of continuous-variable Gaussian states has been extensively studied theoretically and experimentally, as a fundamental manifestation of the EPR paradox. While most of these studies focused on quadrature measurements for steering detection, two recent works revealed that there exist Gaussian states which are only steerable by suitable non-Gaussian measurements. In this paper we perform a systematic investigation of EPR steering of bipartite Gaussian states by pseudospin measurements, complementing and extending previous findings. We first derive the density-matrix elements of two-mode squeezed thermal Gaussian states in the Fock basis, which may be of independent interest. We then use such a representation to investigate steering of these states as detected by a simple nonlinear criterion, based on second moments of the correlation matrix constructed from pseudospin operators. This analysis reveals previously unexplored regimes where non-Gaussian measurements are shown to be more effective than Gaussian ones to witness steering of Gaussian states in the presence of local noise. We further consider an alternative set of pseudospin observables, whose expectation value can be expressed more compactly in terms of Wigner functions for all two-mode Gaussian states. However, according to the adopted criterion, these observables are found to be always less sensitive than conventional Gaussian observables for steering detection. Finally, we investigate continuous-variable Werner states, which are non-Gaussian mixtures of Gaussian states, and find that pseudospin measurements are always more effective than Gaussian ones to reveal their steerability. Our results provide useful insights on the role of non

  19. Analysing Stable Time Series

    National Research Council Canada - National Science Library

    Adler, Robert

    1997-01-01

    We describe how to take a stable, ARMA, time series through the various stages of model identification, parameter estimation, and diagnostic checking, and accompany the discussion with a goodly number...

  20. Complex systems and networks dynamics, controls and applications

    CERN Document Server

    Yu, Xinghuo; Chen, Guanrong; Yu, Wenwu

    2016-01-01

    This elementary book provides some state-of-the-art research results on broad disciplinary sciences on complex networks. It presents an in-depth study with detailed description of dynamics, controls and applications of complex networks. The contents of this book can be summarized as follows. First, the dynamics of complex networks, for example, the cluster dynamic analysis by using kernel spectral methods, community detection algorithms in bipartite networks, epidemiological modeling with demographics and epidemic spreading on multi-layer networks, are studied. Second, the controls of complex networks are investigated including topics like distributed finite-time cooperative control of multi-agent systems by applying homogenous-degree and Lyapunov methods, composite finite-time containment control for disturbed second-order multi-agent systems, fractional-order observer design of multi-agent systems, chaos control and anticontrol of complex systems via Parrondos game and many more. Third, the applications of ...

  1. Bipartite Topology of Treponema pallidum Repeat Proteins C/D and I: OUTER MEMBRANE INSERTION, TRIMERIZATION, AND PORIN FUNCTION REQUIRE A C-TERMINAL β-BARREL DOMAIN.

    Science.gov (United States)

    Anand, Arvind; LeDoyt, Morgan; Karanian, Carson; Luthra, Amit; Koszelak-Rosenblum, Mary; Malkowski, Michael G; Puthenveetil, Robbins; Vinogradova, Olga; Radolf, Justin D

    2015-05-08

    We previously identified Treponema pallidum repeat proteins TprC/D, TprF, and TprI as candidate outer membrane proteins (OMPs) and subsequently demonstrated that TprC is not only a rare OMP but also forms trimers and has porin activity. We also reported that TprC contains N- and C-terminal domains (TprC(N) and TprC(C)) orthologous to regions in the major outer sheath protein (MOSP(N) and MOSP(C)) of Treponema denticola and that TprC(C) is solely responsible for β-barrel formation, trimerization, and porin function by the full-length protein. Herein, we show that TprI also possesses bipartite architecture, trimeric structure, and porin function and that the MOSP(C)-like domains of native TprC and TprI are surface-exposed in T. pallidum, whereas their MOSP(N)-like domains are tethered within the periplasm. TprF, which does not contain a MOSP(C)-like domain, lacks amphiphilicity and porin activity, adopts an extended inflexible structure, and, in T. pallidum, is tightly bound to the protoplasmic cylinder. By thermal denaturation, the MOSP(N) and MOSP(C)-like domains of TprC and TprI are highly thermostable, endowing the full-length proteins with impressive conformational stability. When expressed in Escherichia coli with PelB signal sequences, TprC and TprI localize to the outer membrane, adopting bipartite topologies, whereas TprF is periplasmic. We propose that the MOSP(N)-like domains enhance the structural integrity of the cell envelope by anchoring the β-barrels within the periplasm. In addition to being bona fide T. pallidum rare outer membrane proteins, TprC/D and TprI represent a new class of dual function, bipartite bacterial OMP. © 2015 by The American Society for Biochemistry and Molecular Biology, Inc.

  2. Calcium stable isotope geochemistry

    Energy Technology Data Exchange (ETDEWEB)

    Gausonne, Nikolaus [Muenster Univ. (Germany). Inst. fuer Mineralogie; Schmitt, Anne-Desiree [Strasbourg Univ. (France). LHyGeS/EOST; Heuser, Alexander [Bonn Univ. (Germany). Steinmann-Inst. fuer Geologie, Mineralogie und Palaeontologie; Wombacher, Frank [Koeln Univ. (Germany). Inst. fuer Geologie und Mineralogie; Dietzel, Martin [Technische Univ. Graz (Austria). Inst. fuer Angewandte Geowissenschaften; Tipper, Edward [Cambridge Univ. (United Kingdom). Dept. of Earth Sciences; Schiller, Martin [Copenhagen Univ. (Denmark). Natural History Museum of Denmark

    2016-08-01

    This book provides an overview of the fundamentals and reference values for Ca stable isotope research, as well as current analytical methodologies including detailed instructions for sample preparation and isotope analysis. As such, it introduces readers to the different fields of application, including low-temperature mineral precipitation and biomineralisation, Earth surface processes and global cycling, high-temperature processes and cosmochemistry, and lastly human studies and biomedical applications. The current state of the art in these major areas is discussed, and open questions and possible future directions are identified. In terms of its depth and coverage, the current work extends and complements the previous reviews of Ca stable isotope geochemistry, addressing the needs of graduate students and advanced researchers who want to familiarize themselves with Ca stable isotope research.

  3. Symmetric extension of bipartite quantum states and its use in quantum key distribution with two-way postprocessing

    International Nuclear Information System (INIS)

    Myhr, Geir Ove

    2010-01-01

    Just like we can divide the set of bipartite quantum states into separable states and entangled states, we can divide it into states with and without a symmetric extension. The states with a symmetric extension - which includes all the separable states - behave classically in many ways, while the states without a symmetric extension - which are all entangled - have the potential to exhibit quantum effects. The set of states with a symmetric extension is closed under local quantum operations assisted by one-way classical communication (1-LOCC) just like the set of separable states is closed under local operations assisted by two-way classical communication (LOCC). Because of this, states with a symmetric extension often play the same role in a one-way communication setting as the separable states play in a two-way communication setting. We show that any state with a symmetric extension can be decomposed into a convex combination of states that have a pure symmetric extension. A necessary condition for a state to have a pure symmetric extension is that the spectra of the local and global density matrices are equal. This condition is also sufficient for two qubits, but not for any larger systems. We present a conjectured necessary and sufficient condition for two-qubit states with a symmetric extension. Proofs are provided for some classes of states: rank-two states, states on the symmetric subspace, Bell-diagonal states and states that are invariant under S x S, where S is a phase gate. We also show how the symmetric extension problem for multi-qubit Bell-diagonal states can be simplified and the simplified problem implemented as a semidefinite program. Quantum key distribution protocols such as the six-state protocol and the BB84 protocol effectively gives Alice and Bob Bell-diagonal states that they measure in the standard basis to obtain a raw key which they may then process further to obtain a secret error-free key. When the raw key has a high error rate, the

  4. Symmetric extension of bipartite quantum states and its use in quantum key distribution with two-way postprocessing

    Energy Technology Data Exchange (ETDEWEB)

    Myhr, Geir Ove

    2010-11-08

    Just like we can divide the set of bipartite quantum states into separable states and entangled states, we can divide it into states with and without a symmetric extension. The states with a symmetric extension - which includes all the separable states - behave classically in many ways, while the states without a symmetric extension - which are all entangled - have the potential to exhibit quantum effects. The set of states with a symmetric extension is closed under local quantum operations assisted by one-way classical communication (1-LOCC) just like the set of separable states is closed under local operations assisted by two-way classical communication (LOCC). Because of this, states with a symmetric extension often play the same role in a one-way communication setting as the separable states play in a two-way communication setting. We show that any state with a symmetric extension can be decomposed into a convex combination of states that have a pure symmetric extension. A necessary condition for a state to have a pure symmetric extension is that the spectra of the local and global density matrices are equal. This condition is also sufficient for two qubits, but not for any larger systems. We present a conjectured necessary and sufficient condition for two-qubit states with a symmetric extension. Proofs are provided for some classes of states: rank-two states, states on the symmetric subspace, Bell-diagonal states and states that are invariant under S x S, where S is a phase gate. We also show how the symmetric extension problem for multi-qubit Bell-diagonal states can be simplified and the simplified problem implemented as a semidefinite program. Quantum key distribution protocols such as the six-state protocol and the BB84 protocol effectively gives Alice and Bob Bell-diagonal states that they measure in the standard basis to obtain a raw key which they may then process further to obtain a secret error-free key. When the raw key has a high error rate, the

  5. Evolutionary Stable Strategy

    Indian Academy of Sciences (India)

    2016-08-26

    Aug 26, 2016 ... Home; Journals; Resonance – Journal of Science Education; Volume 21; Issue 9. Evolutionary Stable Strategy: Application of Nash Equilibrium in Biology. General ... Using some examples of classical games, we show how evolutionary game theory can help understand behavioural decisions of animals.

  6. The Stable Concordance Genus

    OpenAIRE

    Kearney, M. Kate

    2013-01-01

    The concordance genus of a knot is the least genus of any knot in its concordance class. Although difficult to compute, it is a useful invariant that highlights the distinction between the three-genus and four-genus. In this paper we define and discuss the stable concordance genus of a knot, which describes the behavior of the concordance genus under connected sum.

  7. Manifolds admitting stable forms

    Czech Academy of Sciences Publication Activity Database

    Le, Hong-Van; Panák, Martin; Vanžura, Jiří

    2008-01-01

    Roč. 49, č. 1 (2008), s. 101-11 ISSN 0010-2628 R&D Projects: GA ČR(CZ) GP201/05/P088 Institutional research plan: CEZ:AV0Z10190503 Keywords : stable forms * automorphism groups Subject RIV: BA - General Mathematics

  8. Stable isotope studies

    International Nuclear Information System (INIS)

    Ishida, T.

    1992-01-01

    The research has been in four general areas: (1) correlation of isotope effects with molecular forces and molecular structures, (2) correlation of zero-point energy and its isotope effects with molecular structure and molecular forces, (3) vapor pressure isotope effects, and (4) fractionation of stable isotopes. 73 refs, 38 figs, 29 tabs

  9. Interactive Stable Ray Tracing

    DEFF Research Database (Denmark)

    Dal Corso, Alessandro; Salvi, Marco; Kolb, Craig

    2017-01-01

    Interactive ray tracing applications running on commodity hardware can suffer from objectionable temporal artifacts due to a low sample count. We introduce stable ray tracing, a technique that improves temporal stability without the over-blurring and ghosting artifacts typical of temporal post-pr...

  10. The stable subgroup graph

    Directory of Open Access Journals (Sweden)

    Behnaz Tolue

    2018-07-01

    Full Text Available In this paper we introduce stable subgroup graph associated to the group $G$. It is a graph with vertex set all subgroups of $G$ and two distinct subgroups $H_1$ and $H_2$ are adjacent if $St_{G}(H_1\\cap H_2\

  11. Case report of right hamate hook fracture in a patient with previous fracture history of left hamate hook: is it hamate bipartite?

    Directory of Open Access Journals (Sweden)

    Norton Sandra

    2006-10-01

    Full Text Available Abstract Background Hamate hook fracture is a common fracture in golfers and others who play sports that involve rackets or sticks such as tennis or hockey. This patient had a previous hamate fracture in the opposing wrist along with potential features of hamate bipartite. Case presentation A 19 year old male presented with a complaint of right wrist pain on the ulnar side of the wrist with no apparent mechanism of injury. The pain came on gradually one week before being seen in the office and he reported no prior care for the complaint. His history includes traumatic left hamate hook fracture with surgical excision. Conclusion The patient was found to have marked tenderness over the hamate and with a prior fracture to the other wrist, computed tomography of the wrist was ordered revealing a fracture to the hamate hook in the right wrist. He was referred for surgical evaluation and the hook of the hamate was excised. Post-surgically, the patient was able to return to normal activity within eight weeks. This case is indicative of fracture rather than hamate bipartite. This fracture should be considered in a case of ulnar sided wrist pain where marked tenderness is noted over the hamate, especially after participation in club or racket sports.

  12. Demonstration of a quantum teleportation network for continuous variables

    Science.gov (United States)

    Yonezawa, Hidehiro; Aoki, Takao; Furusawa, Akira

    2004-09-01

    Quantum teleportation involves the transportation of an unknown quantum state from one location to another, without physical transfer of the information carrier. Although quantum teleportation is a naturally bipartite process, it can be extended to a multipartite protocol known as a quantum teleportation network. In such a network, entanglement is shared between three or more parties. For the case of three parties (a tripartite network), teleportation of a quantum state can occur between any pair, but only with the assistance of the third party. Multipartite quantum protocols are expected to form fundamental components for larger-scale quantum communication and computation. Here we report the experimental realization of a tripartite quantum teleportation network for quantum states of continuous variables (electromagnetic field modes). We demonstrate teleportation of a coherent state between three different pairs in the network, unambiguously demonstrating its tripartite character.

  13. Measuring Asymmetry in Insect-Plant Networks

    Energy Technology Data Exchange (ETDEWEB)

    Cruz, Claudia P T [Programa de Pos-Graduacao em Fisica, Universidade Federal do Rio Grande do Norte, UFRN - Campus Universitario, Lagoa Nova, CEP 59078 972, Natal, RN (Brazil); De Almeida, Adriana M [Departamento de Botanica, Ecologia e Zoologia, Centro de Biociencias, Universidade Federal do Rio Grande do Norte, UFRN - Campus Universitario, Lagoa Nova, CEP 59078 972, Natal, RN (Brazil); Corso, Gilberto, E-mail: claudia@dfte.ufrn.br, E-mail: adrianam@ufrn.br, E-mail: corso@cb.ufrn.br [Departamento de Biofisica e Farmacologia, Centro de Biociencias, Universidade Federal do Rio Grande do Norte, UFRN - Campus Universitario, Lagoa Nova, CEP 59078 972, Natal, RN (Brazil)

    2011-03-01

    In this work we focus on interaction networks between insects and plants and in the characterization of insect plant asymmetry, an important issue in coevolution and evolutionary biology. We analyze in particular the asymmetry in the interaction matrix of animals (herbivorous insects) and plants (food resource for the insects). Instead of driving our attention to the interaction matrix itself we derive two networks associated to the bipartite network: the animal network, D{sub 1}, and the plant network, D{sub 2}. These networks are constructed according to the following recipe: two animal species are linked once if they interact with the same plant. In a similar way, in the plant network, two plants are linked if they interact with the same animal. To explore the asymmetry between D{sub 2} and D{sub 1} we test for a set of 23 networks from the ecologic literature networks: the difference in size, {Delta}L, clustering coefficient difference, {Delta}C, and mean connectivity difference, {Delta}. We used a nonparametric statistical test to check the differences in {Delta}L, {Delta}C and {Delta}. Our results indicate that {Delta}L and {Delta} show a significative asymmetry.

  14. Stable isotope analysis

    International Nuclear Information System (INIS)

    Tibari, Elghali; Taous, Fouad; Marah, Hamid

    2014-01-01

    This report presents results related to stable isotopes analysis carried out at the CNESTEN DASTE in Rabat (Morocco), on behalf of Senegal. These analyzes cover 127 samples. These results demonstrate that Oxygen-18 and Deuterium in water analysis were performed by infrared Laser spectroscopy using a LGR / DLT-100 with Autosampler. Also, the results are expressed in δ values (‰) relative to V-SMOW to ± 0.3 ‰ for oxygen-18 and ± 1 ‰ for deuterium.

  15. Forensic Stable Isotope Biogeochemistry

    Science.gov (United States)

    Cerling, Thure E.; Barnette, Janet E.; Bowen, Gabriel J.; Chesson, Lesley A.; Ehleringer, James R.; Remien, Christopher H.; Shea, Patrick; Tipple, Brett J.; West, Jason B.

    2016-06-01

    Stable isotopes are being used for forensic science studies, with applications to both natural and manufactured products. In this review we discuss how scientific evidence can be used in the legal context and where the scientific progress of hypothesis revisions can be in tension with the legal expectations of widely used methods for measurements. Although this review is written in the context of US law, many of the considerations of scientific reproducibility and acceptance of relevant scientific data span other legal systems that might apply different legal principles and therefore reach different conclusions. Stable isotopes are used in legal situations for comparing samples for authenticity or evidentiary considerations, in understanding trade patterns of illegal materials, and in understanding the origins of unknown decedents. Isotope evidence is particularly useful when considered in the broad framework of physiochemical processes and in recognizing regional to global patterns found in many materials, including foods and food products, drugs, and humans. Stable isotopes considered in the larger spatial context add an important dimension to forensic science.

  16. Stability from Structure : Metabolic Networks Are Unlike Other Biological Networks

    NARCIS (Netherlands)

    Van Nes, P.; Bellomo, D.; Reinders, M.J.T.; De Ridder, D.

    2009-01-01

    In recent work, attempts have been made to link the structure of biochemical networks to their complex dynamics. It was shown that structurally stable network motifs are enriched in such networks. In this work, we investigate to what extent these findings apply to metabolic networks. To this end, we

  17. Unraveling protein networks with power graph analysis.

    Directory of Open Access Journals (Sweden)

    Loïc Royer

    Full Text Available Networks play a crucial role in computational biology, yet their analysis and representation is still an open problem. Power Graph Analysis is a lossless transformation of biological networks into a compact, less redundant representation, exploiting the abundance of cliques and bicliques as elementary topological motifs. We demonstrate with five examples the advantages of Power Graph Analysis. Investigating protein-protein interaction networks, we show how the catalytic subunits of the casein kinase II complex are distinguishable from the regulatory subunits, how interaction profiles and sequence phylogeny of SH3 domains correlate, and how false positive interactions among high-throughput interactions are spotted. Additionally, we demonstrate the generality of Power Graph Analysis by applying it to two other types of networks. We show how power graphs induce a clustering of both transcription factors and target genes in bipartite transcription networks, and how the erosion of a phosphatase domain in type 22 non-receptor tyrosine phosphatases is detected. We apply Power Graph Analysis to high-throughput protein interaction networks and show that up to 85% (56% on average of the information is redundant. Experimental networks are more compressible than rewired ones of same degree distribution, indicating that experimental networks are rich in cliques and bicliques. Power Graphs are a novel representation of networks, which reduces network complexity by explicitly representing re-occurring network motifs. Power Graphs compress up to 85% of the edges in protein interaction networks and are applicable to all types of networks such as protein interactions, regulatory networks, or homology networks.

  18. Generalised power graph compression reveals dominant relationship patterns in complex networks.

    Science.gov (United States)

    Ahnert, Sebastian E

    2014-03-25

    We introduce a framework for the discovery of dominant relationship patterns in complex networks, by compressing the networks into power graphs with overlapping power nodes. When paired with enrichment analysis of node classification terms, the most compressible sets of edges provide a highly informative sketch of the dominant relationship patterns that define the network. In addition, this procedure also gives rise to a novel, link-based definition of overlapping node communities in which nodes are defined by their relationships with sets of other nodes, rather than through connections within the community. We show that this completely general approach can be applied to undirected, directed, and bipartite networks, yielding valuable insights into the large-scale structure of real-world networks, including social networks and food webs. Our approach therefore provides a novel way in which network architecture can be studied, defined and classified.

  19. The mathematics of non-linear metrics for nested networks

    Science.gov (United States)

    Wu, Rui-Jie; Shi, Gui-Yuan; Zhang, Yi-Cheng; Mariani, Manuel Sebastian

    2016-10-01

    Numerical analysis of data from international trade and ecological networks has shown that the non-linear fitness-complexity metric is the best candidate to rank nodes by importance in bipartite networks that exhibit a nested structure. Despite its relevance for real networks, the mathematical properties of the metric and its variants remain largely unexplored. Here, we perform an analytic and numeric study of the fitness-complexity metric and a new variant, called minimal extremal metric. We rigorously derive exact expressions for node scores for perfectly nested networks and show that these expressions explain the non-trivial convergence properties of the metrics. A comparison between the fitness-complexity metric and the minimal extremal metric on real data reveals that the latter can produce improved rankings if the input data are reliable.

  20. The challenges of using high-throughput sequencing to track multiple bipartite mycoviruses of wild orchid-fungus partnerships over consecutive years.

    Science.gov (United States)

    Ong, Jamie W L; Li, Hua; Sivasithamparam, Krishnapillai; Dixon, Kingsley W; Jones, Michael G K; Wylie, Stephen J

    2017-10-01

    The bipartite alpha- and betapartitiviruses are recorded from a wide range of fungi and plants. Using a combination of dsRNA-enrichment, high-throughput shotgun sequencing and informatics, we report the occurrence of multiple new partitiviruses associated with mycorrhizal Ceratobasidium fungi, themselves symbiotically associated with a small wild population of Pterostylis sanguinea orchids in Australia, over two consecutive years. Twenty-one partial or near-complete sequences representing 16 definitive alpha- and betapartitivirus species, and further possible species, were detected from two fungal isolates. The majority of partitiviruses occurred in fungal isolates from both years. Two of the partitiviruses represent phylogenetically divergent forms of Alphapartitivirus, suggesting that they may have evolved under long geographical isolation there. We address the challenge of pairing the two genomic segments of partitiviruses to identify species when multiple partitiviruses co-infect a single host. Copyright © 2017 Elsevier Inc. All rights reserved.

  1. Bipartite life cycle of coral reef fishes promotes increasing shape disparity of the head skeleton during ontogeny: an example from damselfishes (Pomacentridae

    Directory of Open Access Journals (Sweden)

    Vandewalle Pierre

    2011-03-01

    Full Text Available Abstract Background Quantitative studies of the variation of disparity during ontogeny exhibited by the radiation of coral reef fishes are lacking. Such studies dealing with the variation of disparity, i.e. the diversity of organic form, over ontogeny could be a first step in detecting evolutionary mechanisms in these fishes. The damselfishes (Pomacentridae have a bipartite life-cycle, as do the majority of demersal coral reef fishes. During their pelagic dispersion phase, all larvae feed on planktonic prey. On the other hand, juveniles and adults associated with the coral reef environment show a higher diversity of diets. Using geometric morphometrics, we study the ontogenetic dynamic of shape disparity of different head skeletal units (neurocranium, suspensorium and opercle, mandible and premaxilla in this fish family. We expected that larvae of different species might be relatively similar in shapes. Alternatively, specialization may become notable even in the juvenile and adult phase. Results The disparity levels increase significantly throughout ontogeny for each skeletal unit. At settlement, all larval shapes are already species-specific. Damselfishes show high levels of ontogenetic allometry during their post-settlement growth. The divergence of allometric patterns largely explains the changes in patterns and levels of shape disparity over ontogeny. The rate of shape change and the length of ontogenetic trajectories seem to be less variable among species. We also show that the high levels of shape disparity at the adult stage are correlated to a higher level of ecological and functional diversity in this stage. Conclusion Diversification throughout ontogeny of damselfishes results from the interaction among several developmental novelties enhancing disparity. The bipartite life-cycle of damselfishes exemplifies a case where the variation of environmental factors, i.e. the transition from the more homogeneous oceanic environment to the

  2. Bipartite life cycle of coral reef fishes promotes increasing shape disparity of the head skeleton during ontogeny: an example from damselfishes (Pomacentridae).

    Science.gov (United States)

    Frédérich, Bruno; Vandewalle, Pierre

    2011-03-30

    Quantitative studies of the variation of disparity during ontogeny exhibited by the radiation of coral reef fishes are lacking. Such studies dealing with the variation of disparity, i.e. the diversity of organic form, over ontogeny could be a first step in detecting evolutionary mechanisms in these fishes. The damselfishes (Pomacentridae) have a bipartite life-cycle, as do the majority of demersal coral reef fishes. During their pelagic dispersion phase, all larvae feed on planktonic prey. On the other hand, juveniles and adults associated with the coral reef environment show a higher diversity of diets. Using geometric morphometrics, we study the ontogenetic dynamic of shape disparity of different head skeletal units (neurocranium, suspensorium and opercle, mandible and premaxilla) in this fish family. We expected that larvae of different species might be relatively similar in shapes. Alternatively, specialization may become notable even in the juvenile and adult phase. The disparity levels increase significantly throughout ontogeny for each skeletal unit. At settlement, all larval shapes are already species-specific. Damselfishes show high levels of ontogenetic allometry during their post-settlement growth. The divergence of allometric patterns largely explains the changes in patterns and levels of shape disparity over ontogeny. The rate of shape change and the length of ontogenetic trajectories seem to be less variable among species. We also show that the high levels of shape disparity at the adult stage are correlated to a higher level of ecological and functional diversity in this stage. Diversification throughout ontogeny of damselfishes results from the interaction among several developmental novelties enhancing disparity. The bipartite life-cycle of damselfishes exemplifies a case where the variation of environmental factors, i.e. the transition from the more homogeneous oceanic environment to the coral reef offering a wide range of feeding habits, promotes

  3. Marginally Stable Nuclear Burning

    Science.gov (United States)

    Strohmayer, Tod E.; Altamirano, D.

    2012-01-01

    Thermonuclear X-ray bursts result from unstable nuclear burning of the material accreted on neutron stars in some low mass X-ray binaries (LMXBs). Theory predicts that close to the boundary of stability oscillatory burning can occur. This marginally stable regime has so far been identified in only a small number of sources. We present Rossi X-ray Timing Explorer (RXTE) observations of the bursting, high- inclination LMXB 4U 1323-619 that reveal for the first time in this source the signature of marginally stable burning. The source was observed during two successive RXTE orbits for approximately 5 ksec beginning at 10:14:01 UTC on March 28, 2011. Significant mHz quasi- periodic oscillations (QPO) at a frequency of 8.1 mHz are detected for approximately 1600 s from the beginning of the observation until the occurrence of a thermonuclear X-ray burst at 10:42:22 UTC. The mHz oscillations are not detected following the X-ray burst. The average fractional rms amplitude of the mHz QPOs is 6.4% (3 - 20 keV), and the amplitude increases to about 8% below 10 keV.This phenomenology is strikingly similar to that seen in the LMXB 4U 1636-53. Indeed, the frequency of the mHz QPOs in 4U 1323-619 prior to the X-ray burst is very similar to the transition frequency between mHz QPO and bursts found in 4U 1636-53 by Altamirano et al. (2008). These results strongly suggest that the observed QPOs in 4U 1323-619 are, like those in 4U 1636-53, due to marginally stable nuclear burning. We also explore the dependence of the energy spectrum on the oscillation phase, and we place the present observations within the context of the spectral evolution of the accretion-powered flux from the source.

  4. Relative impacts of environmental variation and evolutionary history on the nestedness and modularity of tree-herbivore networks.

    Science.gov (United States)

    Robinson, Kathryn M; Hauzy, Céline; Loeuille, Nicolas; Albrectsen, Benedicte R

    2015-07-01

    Nestedness and modularity are measures of ecological networks whose causative effects are little understood. We analyzed antagonistic plant-herbivore bipartite networks using common gardens in two contrasting environments comprised of aspen trees with differing evolutionary histories of defence against herbivores. These networks were tightly connected owing to a high level of specialization of arthropod herbivores that spend a large proportion of the life cycle on aspen. The gardens were separated by ten degrees of latitude with resultant differences in abiotic conditions. We evaluated network metrics and reported similar connectance between gardens but greater numbers of links per species in the northern common garden. Interaction matrices revealed clear nestedness, indicating subsetting of the bipartite interactions into specialist divisions, in both the environmental and evolutionary aspen groups, although nestedness values were only significant in the northern garden. Variation in plant vulnerability, measured as the frequency of herbivore specialization in the aspen population, was significantly partitioned by environment (common garden) but not by evolutionary origin of the aspens. Significant values of modularity were observed in all network matrices. Trait-matching indicated that growth traits, leaf morphology, and phenolic metabolites affected modular structure in both the garden and evolutionary groups, whereas extra-floral nectaries had little influence. Further examination of module configuration revealed that plant vulnerability explained considerable variance in web structure. The contrasting conditions between the two gardens resulted in bottom-up effects of the environment, which most strongly influenced the overall network architecture, however, the aspen groups with dissimilar evolutionary history also showed contrasting degrees of nestedness and modularity. Our research therefore shows that, while evolution does affect the structure of aspen

  5. Relative impacts of environmental variation and evolutionary history on the nestedness and modularity of tree–herbivore networks

    Science.gov (United States)

    Robinson, Kathryn M; Hauzy, Céline; Loeuille, Nicolas; Albrectsen, Benedicte R

    2015-01-01

    Nestedness and modularity are measures of ecological networks whose causative effects are little understood. We analyzed antagonistic plant–herbivore bipartite networks using common gardens in two contrasting environments comprised of aspen trees with differing evolutionary histories of defence against herbivores. These networks were tightly connected owing to a high level of specialization of arthropod herbivores that spend a large proportion of the life cycle on aspen. The gardens were separated by ten degrees of latitude with resultant differences in abiotic conditions. We evaluated network metrics and reported similar connectance between gardens but greater numbers of links per species in the northern common garden. Interaction matrices revealed clear nestedness, indicating subsetting of the bipartite interactions into specialist divisions, in both the environmental and evolutionary aspen groups, although nestedness values were only significant in the northern garden. Variation in plant vulnerability, measured as the frequency of herbivore specialization in the aspen population, was significantly partitioned by environment (common garden) but not by evolutionary origin of the aspens. Significant values of modularity were observed in all network matrices. Trait-matching indicated that growth traits, leaf morphology, and phenolic metabolites affected modular structure in both the garden and evolutionary groups, whereas extra-floral nectaries had little influence. Further examination of module configuration revealed that plant vulnerability explained considerable variance in web structure. The contrasting conditions between the two gardens resulted in bottom-up effects of the environment, which most strongly influenced the overall network architecture, however, the aspen groups with dissimilar evolutionary history also showed contrasting degrees of nestedness and modularity. Our research therefore shows that, while evolution does affect the structure of aspen

  6. Uncertain links in host-parasite networks: lessons for parasite transmission in a multi-host system.

    Science.gov (United States)

    Walker, Josephine G; Plein, Michaela; Morgan, Eric R; Vesk, Peter A

    2017-05-05

    For many parasites, the full set of hosts that are susceptible to infection is not known, and this could lead to a bias in estimates of transmission. We used counts of individual adult parasites from historical parasitology studies in southern Africa to map a bipartite network of the nematode parasites of herbivore hosts that occur in Botswana. Bipartite networks are used in community ecology to represent interactions across trophic levels. We used a Bayesian hierarchical model to predict the full set of host-parasite interactions from existing data on parasitic gastrointestinal nematodes of wild and domestic ungulates given assumptions about the distribution of parasite counts within hosts, while accounting for the relative uncertainty of less sampled species. We used network metrics to assess the difference between the observed and predicted networks, and to explore the connections between hosts via their shared parasites using a host-host unipartite network projected from the bipartite network. The model predicts a large number of missing links and identifies red hartebeest, giraffe and steenbok as the hosts that have the most uncertainty in parasite diversity. Further, the unipartite network reveals clusters of herbivores that have a high degree of parasite sharing, and these clusters correspond closely with phylogenetic distance rather than with the wild/domestic boundary. These results provide a basis for predicting the risk of cross-species transmission of nematode parasites in areas where livestock and wildlife share grazing land.This article is part of the themed issue 'Opening the black box: re-examining the ecology and evolution of parasite transmission'. © 2017 The Authors.

  7. Uncertain links in host–parasite networks: lessons for parasite transmission in a multi-host system

    Science.gov (United States)

    2017-01-01

    For many parasites, the full set of hosts that are susceptible to infection is not known, and this could lead to a bias in estimates of transmission. We used counts of individual adult parasites from historical parasitology studies in southern Africa to map a bipartite network of the nematode parasites of herbivore hosts that occur in Botswana. Bipartite networks are used in community ecology to represent interactions across trophic levels. We used a Bayesian hierarchical model to predict the full set of host–parasite interactions from existing data on parasitic gastrointestinal nematodes of wild and domestic ungulates given assumptions about the distribution of parasite counts within hosts, while accounting for the relative uncertainty of less sampled species. We used network metrics to assess the difference between the observed and predicted networks, and to explore the connections between hosts via their shared parasites using a host–host unipartite network projected from the bipartite network. The model predicts a large number of missing links and identifies red hartebeest, giraffe and steenbok as the hosts that have the most uncertainty in parasite diversity. Further, the unipartite network reveals clusters of herbivores that have a high degree of parasite sharing, and these clusters correspond closely with phylogenetic distance rather than with the wild/domestic boundary. These results provide a basis for predicting the risk of cross-species transmission of nematode parasites in areas where livestock and wildlife share grazing land. This article is part of the themed issue ‘Opening the black box: re-examining the ecology and evolution of parasite transmission’. PMID:28289262

  8. On Consensus of Star-Composed Networks with an Application of Laplacian Spectrum

    Directory of Open Access Journals (Sweden)

    Da Huang

    2017-01-01

    Full Text Available In this paper, we mainly study the performance of star-composed networks which can achieve consensus. Specifically, we investigate the convergence speed and robustness of the consensus of the networks, which can be measured by the smallest nonzero eigenvalue λ2 of the Laplacian matrix and the H2 norm of the graph, respectively. In particular, we introduce the notion of the corona of two graphs to construct star-composed networks and apply the Laplacian spectrum to discuss the convergence speed and robustness for the communication network. Finally, the performances of the star-composed networks have been compared, and we find that the network in which the centers construct a balanced complete bipartite graph has the most advantages of performance. Our research would provide a new insight into the combination between the field of consensus study and the theory of graph spectra.

  9. Multidimensional scaling of ideological landscape on social network sites

    Science.gov (United States)

    Lee, Deokjae; Hahn, Kyu S.; Park, Juyong

    2012-02-01

    Social network sites (SNSs) are valuable source of information on various subjects in network science. Recently, political activity of SNSs users has increasing attention and is an interesting interdisciplinary subject of physical and social science. In this work, we measure ideological positions of the legislators of U.S. and South Korea (S.K.) evaluated by Twitter users, using the information employed in the bipartite network structure of the legislators and their Twitter followers. We compare the result with ideological positions constructed from roll call record of the legislators. This shows there is a discrepancy between the ideological positions evaluated by Twitter users and actual positions estimated from roll call votes in S.K. We also asses the ideological positions of the Twitter users themselves and analyze the distribution of the positions.

  10. Understanding the Scalability of Bayesian Network Inference Using Clique Tree Growth Curves

    Science.gov (United States)

    Mengshoel, Ole J.

    2010-01-01

    One of the main approaches to performing computation in Bayesian networks (BNs) is clique tree clustering and propagation. The clique tree approach consists of propagation in a clique tree compiled from a Bayesian network, and while it was introduced in the 1980s, there is still a lack of understanding of how clique tree computation time depends on variations in BN size and structure. In this article, we improve this understanding by developing an approach to characterizing clique tree growth as a function of parameters that can be computed in polynomial time from BNs, specifically: (i) the ratio of the number of a BN s non-root nodes to the number of root nodes, and (ii) the expected number of moral edges in their moral graphs. Analytically, we partition the set of cliques in a clique tree into different sets, and introduce a growth curve for the total size of each set. For the special case of bipartite BNs, there are two sets and two growth curves, a mixed clique growth curve and a root clique growth curve. In experiments, where random bipartite BNs generated using the BPART algorithm are studied, we systematically increase the out-degree of the root nodes in bipartite Bayesian networks, by increasing the number of leaf nodes. Surprisingly, root clique growth is well-approximated by Gompertz growth curves, an S-shaped family of curves that has previously been used to describe growth processes in biology, medicine, and neuroscience. We believe that this research improves the understanding of the scaling behavior of clique tree clustering for a certain class of Bayesian networks; presents an aid for trade-off studies of clique tree clustering using growth curves; and ultimately provides a foundation for benchmarking and developing improved BN inference and machine learning algorithms.

  11. Affinity driven social networks

    Science.gov (United States)

    Ruyú, B.; Kuperman, M. N.

    2007-04-01

    In this work we present a model for evolving networks, where the driven force is related to the social affinity between individuals of a population. In the model, a set of individuals initially arranged on a regular ordered network and thus linked with their closest neighbors are allowed to rearrange their connections according to a dynamics closely related to that of the stable marriage problem. We show that the behavior of some topological properties of the resulting networks follows a non trivial pattern.

  12. Dynamical attraction to stable processes

    OpenAIRE

    Fisher, Albert M.; Talet, Marina

    2012-01-01

    We apply dynamical ideas within probability theory, proving an almost-sure invariance principle in log density for stable processes. The familiar scaling property (self-similarity) of the stable process has a stronger expression, that the scaling flow on Skorokhod path space is a Bernoulli flow. We prove that typical paths of a random walk with i.i.d. increments in the domain of attraction of a stable law can be paired with paths of a stable process so that, after applying a non-random regula...

  13. One- and two-cluster synchronized dynamics of non-diffusively coupled Tchebycheff map networks

    International Nuclear Information System (INIS)

    Schäfer, Mirko; Greiner, Martin

    2012-01-01

    We use the master stability formalism to discuss one- and two-cluster synchronization of coupled Tchebycheff map networks. For diffusively coupled map systems, the one-cluster synchronized dynamics is given by the behaviour of the individual maps, and the coupling only determines the stability of the coherent state. For the case of non-diffusive coupling and for two-cluster synchronization, the synchronized dynamics on networks is different from the behaviour of the single individual map. Depending on the coupling, we study numerically the characteristics of various forms of the resulting synchronized dynamics. The stability properties of the respective one-cluster synchronized states are discussed for arbitrary network structures. For the case of two-cluster synchronization on bipartite networks we also present analytical expressions for fixed points and zig-zag patterns, and explicitly determine the linear stability of these orbits for the special case of ring-networks.

  14. Fisher metric, geometric entanglement, and spin networks

    Science.gov (United States)

    Chirco, Goffredo; Mele, Fabio M.; Oriti, Daniele; Vitale, Patrizia

    2018-02-01

    Starting from recent results on the geometric formulation of quantum mechanics, we propose a new information geometric characterization of entanglement for spin network states in the context of quantum gravity. For the simple case of a single-link fixed graph (Wilson line), we detail the construction of a Riemannian Fisher metric tensor and a symplectic structure on the graph Hilbert space, showing how these encode the whole information about separability and entanglement. In particular, the Fisher metric defines an entanglement monotone which provides a notion of distance among states in the Hilbert space. In the maximally entangled gauge-invariant case, the entanglement monotone is proportional to a power of the area of the surface dual to the link thus supporting a connection between entanglement and the (simplicial) geometric properties of spin network states. We further extend such analysis to the study of nonlocal correlations between two nonadjacent regions of a generic spin network graph characterized by the bipartite unfolding of an intertwiner state. Our analysis confirms the interpretation of spin network bonds as a result of entanglement and to regard the same spin network graph as an information graph, whose connectivity encodes, both at the local and nonlocal level, the quantum correlations among its parts. This gives a further connection between entanglement and geometry.

  15. Linking biodiversity to mutualistic networks – woody species and ectomycorrhizal fungi

    Directory of Open Access Journals (Sweden)

    Ecaterina Fodor

    2013-05-01

    Full Text Available Mutualistic interactions are currently mapped by bipartite networkswith particular architecture and properties. The mycorrhizae connectthe trees and permit them to share resources, therefore relaxing thecompetition. Ectomycorrhizal macrofungi associated with woody species(Quercus robur, Q. cerris, Q. petraea, Tilia tomentosa, Carpinus betulus, Corylus avellana, and Q. pubescens growing in a temperate, broadleaved mixed forest, from a hilly area near the city of Cluj–Napoca, central Romania were included in a bipartite mutualistic network. Community structure was investigated using several network metrics, modularity and nestedness algorithms in conjunction with C-score index cluster analysis and nonmetric multidimensional scaling (the Kulczynski similarity was index used as most appropriate metric selected by minimal stress criterion. The results indicate that the network presents high asymmetry (hosts are outnumbered by mycobionts at a great extent, high connectance, low modularity, andhigh nestedness, competition playing a secondary role in community assemblage (non significant difference between simulated and observed Cscore.The nestedness pattern is non-random and is comparable to previouslypublished results for other similar interactions containing plants. Inthe proposed network, woody species function exclusively as generalists. Modularity analysis is a finer tool were identifying species roles than centrality measures, however, the two types of algorithms permit the separation of species according to their roles as for example connectors (generalist species and ultraperipheral species (specialists. Supergeneralist woody species function as hubs for the diverse ectomycorrhizal community while supergeneralistectomycorrhizal fungi glue the hubs into a coherent aggregate.

  16. Hydrothermally stable molecular separation membranes from organically linked silica

    NARCIS (Netherlands)

    Castricum, H.L.; Ashima sah, A.S.; Kreiter, Robert; Blank, David H.A.; Vente, Jaap F.; ten Elshof, Johan E.

    2008-01-01

    A highly hydrothermally stable microporous network material has been developed that can be applied in energy-efficient molecular sieving. The material was synthesized by employing organically bridged monomers in acid-catalysed sol–gel hydrolysis and condensation, and is composed of covalently bonded

  17. Hydrothermally stable molecular separation membranes from organically linked silica

    NARCIS (Netherlands)

    Castricum, H.L.; Sah, A.; Kreiter, R.; Blank, D.H.A.; Vente, J.F.; ten Elshof, J.E.

    2008-01-01

    A highly hydrothermally stable microporous network material has been developed that can be applied in energy-efficient molecular sieving. The material was synthesized by employing organically bridged monomers in acid-catalysed sol-gel hydrolysis and condensation, and is composed of covalently bonded

  18. A construção da memória organizacional utilizando o gerenciamento de processo nas pactuações da comissão intergestores bipartite do Sistema Único de SaúdeThe construction of the organizacional memory using the management of process in the agreements in the intermanagers' bipartite Commission in the SUS

    Directory of Open Access Journals (Sweden)

    Lourdes de Costa Remor

    2009-01-01

    Full Text Available O artigo aborda o gerenciamento de processo e a sua implicação na construção da memória organizacional. Apresenta a relevância do conhecimento em uma organização e os danos causados quando eles não são incorporados à memória da organização. O gerenciamento de processo por organizar e sistematizar os trabalhos parece permitir a disseminação do conhecimento dentro da organização, tanto para os indivíduos quanto para os repositórios. E por fim, apresenta o processo da pactuação na Comissão Intergestores Bipartite, Fórum de negociação e tomada de decisão entre os Gestores: Municipais e Estadual do SUS.The article approaches the management process and the implication in the construction of the organization’s memory. It presents the relevance of the knowledge in an organization and the mischief caused when they are not incorporated to the memory of the organization. The management of the process by organizing and systematizing the works, and for that, it permits the dissemination of the knowledge inside the organization, so much for the individuals or for the repositories. And finally, it presents the process of the agreement in the Intergestores Bipartite Commission, Forum of negotiation and decision-making between the State and Municipal Agents of the SUS.

  19. Scaling down from species to individuals: a flower-visitation network between individual honeybees and thistle plants

    DEFF Research Database (Denmark)

    Dupont, Yoko; Nielsen, Kristian T.; Olesen, Jens Mogens

    2011-01-01

    Studies of ecological networks usually focus upon interaction patterns among species. However, linkage among species is mediated by their constituting individuals. Thus, every linked species pair in a network encapsulates a new network of interacting individuals. Very few studies outside......, and interactions were asymmetrical. Unipartite networks of either plants or bees had exceedingly short average path length and high clustering. Linkage level of plants increased with their number of flower heads and height of inflorescence (floral display parameters). Overall, the individual network of honeybees...... stems and monitored all floral visits. The constructed bipartite network of individual plants and bees had a high connectance and low nestedness, but it was not significantly modular. Frequency distributions of number of links per species (i.e. linkage level) had their best fit to a truncated power law...

  20. Quantification of stable isotope label in metabolites via mass spectrometry.

    Science.gov (United States)

    Huege, Jan; Goetze, Jan; Dethloff, Frederik; Junker, Bjoern; Kopka, Joachim

    2014-01-01

    Isotope labelling experiments with stable or radioactive isotopes have long been an integral part of biological and medical research. Labelling experiments led to the discovery of new metabolic pathways and made it possible to calculate the fluxes responsible for a metabolic phenotype, i.e., the qualitative and quantitative composition of metabolites in a biological system. Prerequisite for efficient isotope labelling experiments is a reliable and precise method to analyze the redistribution of isotope label in a metabolic network. Here we describe the use of the CORRECTOR program, which utilizes matrix calculations to correct mass spectral data from stable isotope labelling experiments for the distorting effect of naturally occurring stable isotopes (NOIs). CORRECTOR facilitates and speeds up the routine quantification of experimentally introduced isotope label from multiple mass spectral readouts, which are generated by routine metabolite profiling when combined with stable isotope labelling experiments.

  1. Stable isotope views on ecosystem function: challenging or challenged?

    Science.gov (United States)

    Resco, Víctor; Querejeta, José I.; Ogle, Kiona; Voltas, Jordi; Sebastià, Maria-Teresa; Serrano-Ortiz, Penélope; Linares, Juan C.; Moreno-Gutiérrez, Cristina; Herrero, Asier; Carreira, José A.; Torres-Cañabate, Patricia; Valladares, Fernando

    2010-01-01

    Stable isotopes and their potential for detecting various and complex ecosystem processes are attracting an increasing number of scientists. Progress is challenging, particularly under global change scenarios, but some established views have been challenged. The IX meeting of the Spanish Association of Terrestrial Ecology (AAET, Úbeda, 18–22 October 2009) hosted a symposium on the ecology of stable isotopes where the linear mixing model approach of partitioning sinks and sources of carbon and water fluxes within an ecosystem was challenged, and new applications of stable isotopes for the study of plant interactions were evaluated. Discussion was also centred on the need for networks that monitor ecological processes using stable isotopes and key ideas for fostering future research with isotopes. PMID:20015858

  2. Shelf-Stable Food Safety

    Science.gov (United States)

    ... is an MRE? Is an MRE shelf stable? What foods are packaged in retort packages? What is aseptic ... type of package is used for aseptic processing? What foods are packaged in aseptic packages? Can I microwave ...

  3. Pharmaceuticals labelled with stable isotopes

    International Nuclear Information System (INIS)

    Krumbiegel, P.

    1986-11-01

    The relatively new field of pharmaceuticals labelled with stable isotopes is reviewed. Scientific, juridical, and ethical questions are discussed concerning the application of these pharmaceuticals in human medicine. 13 C, 15 N, and 2 H are the stable isotopes mainly utilized in metabolic function tests. Methodical contributions are given to the application of 2 H, 13 C, and 15 N pharmaceuticals showing new aspects and different states of development in the field under discussion. (author)

  4. Stable isotope research pool inventory

    International Nuclear Information System (INIS)

    1984-03-01

    This report contains a listing of electromagnetically separated stable isotopes which are available at the Oak Ridge National Laboratory for distribution for nondestructive research use on a loan basis. This inventory includes all samples of stable isotopes in the Research Materials Collection and does not designate whether a sample is out on loan or is in reprocessing. For some of the high abundance naturally occurring isotopes, larger amounts can be made available; for example, Ca-40 and Fe-56

  5. Complex network study of Brazilian soccer players

    Science.gov (United States)

    Onody, Roberto N.; de Castro, Paulo A.

    2004-09-01

    Although being a very popular sport in many countries, soccer has not received much attention from the scientific community. In this paper, we study soccer from a complex network point of view. First, we consider a bipartite network with two kinds of vertices or nodes: the soccer players and the clubs. Real data were gathered from the 32 editions of the Brazilian soccer championship, in a total of 13411 soccer players and 127 clubs. We find a lot of interesting and perhaps unsuspected results. The probability that a Brazilian soccer player has worked at N clubs or played M games shows an exponential decay while the probability that he has scored G goals is power law. Now, if two soccer players who have worked at the same club at the same time are connected by an edge, then a new type of network arises (composed exclusively by soccer player nodes). Our analysis shows that for this network the degree distribution decays exponentially. We determine the exact values of the clustering coefficient, the assortativity coefficient and the average shortest path length and compare them with those of the Erdös-Rényi and configuration model. The time evolution of these quantities are calculated and the corresponding results discussed.

  6. Spectra of Adjacency Matrices in Networks with Extreme Introverts and Extroverts

    Science.gov (United States)

    Bassler, Kevin E.; Zia, Royce K. P.

    In recent studies of networks with preferred degrees (suitable for describing social networks in which individuals tend to prefer a certain number of contacts), the XIE model of extreme introverts and extroverts was found to display remarkable collective behavior and to raise interesting theoretical issues. Though this system is defined through its dynamics, i.e., introverts/extroverts always cut/add links, the steady state turns out to be a Boltzmann-like distribution. While the intra-group links are static, the cross-links are dynamic and lead to an ensemble of bipartite graphs, with extraordinary long-ranged correlations between elements of the incidence matrix (details in JSTAT P07013, 2015). Here, we report simulation studies of a different perspective of networks, namely, the spectra associated with this ensemble of adjacency matrices. As a baseline, we first consider the spectra associated with (the adjacency matrices of) a simple random (Erdôs-Rènyi) ensemble of bipartite graphs, where simulation results can be understood analytically. Work supported by the NSF through Grants DMR-1206839 and DMR-1507371.

  7. TprC/D (Tp0117/131), a Trimeric, Pore-Forming Rare Outer Membrane Protein of Treponema pallidum, Has a Bipartite Domain Structure

    Science.gov (United States)

    Anand, Arvind; Luthra, Amit; Dunham-Ems, Star; Caimano, Melissa J.; Karanian, Carson; LeDoyt, Morgan; Cruz, Adriana R.; Salazar, Juan C.

    2012-01-01

    Identification of Treponema pallidum rare outer membrane proteins (OMPs) has been a longstanding objective of syphilis researchers. We recently developed a consensus computational framework that employs a battery of cellular localization and topological prediction tools to generate ranked clusters of candidate rare OMPs (D. L. Cox et al., Infect. Immun. 78:5178–5194, 2010). TP0117/TP0131 (TprC/D), a member of the T. pallidum repeat (Tpr) family, was a highly ranked candidate. Circular dichroism, heat modifiability by SDS-PAGE, Triton X-114 phase partitioning, and liposome incorporation confirmed that full-length, recombinant TprC (TprCFl) forms a β-barrel capable of integrating into lipid bilayers. Moreover, TprCFl increased efflux of terbium-dipicolinic acid complex from large unilamellar vesicles and migrated as a trimer by blue-native PAGE. We found that in T. pallidum, TprC is heat modifiable, trimeric, expressed in low abundance, and, based on proteinase K accessibility and opsonophagocytosis assays, surface exposed. From these collective data, we conclude that TprC is a bona fide rare OMP as well as a functional ortholog of Escherichia coli OmpF. We also discovered that TprC has a bipartite architecture consisting of a soluble N-terminal portion (TprCN), presumably periplasmic and bound directly or indirectly to peptidoglycan, and a C-terminal β-barrel (TprCC). Syphilitic rabbits generate antibodies exclusively against TprCC, while secondary syphilis patients fail to mount a detectable antibody response against either domain. The syphilis spirochete appears to have resolved a fundamental dilemma arising from its extracellular lifestyle, namely, how to enhance OM permeability without increasing its vulnerability to the antibody-mediated defenses of its natural human host. PMID:22389487

  8. Stable Boundary Layer Education (STABLE) Final Campaign Summary

    Energy Technology Data Exchange (ETDEWEB)

    Turner, David D. [Pacific Northwest National Lab. (PNNL), Richland, WA (United States)

    2016-03-01

    The properties of, and the processes that occur in, the nocturnal stable boundary layer are not well understood, making it difficult to represent adequately in numerical models. The nocturnal boundary layer often is characterized by a temperature inversion and, in the Southern Great Plains region, a low-level jet. To advance our understanding of the nocturnal stable boundary layer, high temporal and vertical resolution data on the temperature and wind properties are needed, along with both large-eddy simulation and cloud-resolving modeling.

  9. Exploring cancer metabolism using stable isotope-resolved metabolomics (SIRM).

    Science.gov (United States)

    Bruntz, Ronald C; Lane, Andrew N; Higashi, Richard M; Fan, Teresa W-M

    2017-07-14

    Metabolic reprogramming is a hallmark of cancer. The changes in metabolism are adaptive to permit proliferation, survival, and eventually metastasis in a harsh environment. Stable isotope-resolved metabolomics (SIRM) is an approach that uses advanced approaches of NMR and mass spectrometry to analyze the fate of individual atoms from stable isotope-enriched precursors to products to deduce metabolic pathways and networks. The approach can be applied to a wide range of biological systems, including human subjects. This review focuses on the applications of SIRM to cancer metabolism and its use in understanding drug actions. © 2017 by The American Society for Biochemistry and Molecular Biology, Inc.

  10. Social cognitive radio networks

    CERN Document Server

    Chen, Xu

    2015-01-01

    This brief presents research results on social cognitive radio networks, a transformational and innovative networking paradigm that promotes the nexus between social interactions and cognitive radio networks. Along with a review of the research literature, the text examines the key motivation and challenges of social cognitive radio network design. Three socially inspired distributed spectrum sharing mechanisms are introduced: adaptive channel recommendation mechanism, imitation-based social spectrum sharing mechanism, and evolutionarily stable spectrum access mechanism. The brief concludes with a discussion of future research directions which ascertains that exploiting social interactions for distributed spectrum sharing will advance the state-of-the-art of cognitive radio network design, spur a new line of thinking for future wireless networks, and enable novel wireless service and applications.

  11. Radiation-stable polyolefin compositions

    International Nuclear Information System (INIS)

    Rekers, J.W.

    1986-01-01

    This invention relates to compositions of olefinic polymers suitable for high energy radiation treatment. In particular, the invention relates to olefinic polymer compositions that are stable to sterilizing dosages of high energy radiation such as a gamma radiation. Stabilizers are described that include benzhydrol and benzhydrol derivatives; these stabilizers may be used alone or in combination with secondary antioxidants or synergists

  12. Monitoring of stable glaucoma patients

    NARCIS (Netherlands)

    K.M. Holtzer-Goor (Kim); N.S. Klazinga (Niek); M.A. Koopmanschap (Marc); H.G. Lemij (Hans); T. Plochg; E. van Sprundel (Esther)

    2010-01-01

    textabstractA high workload for ophthalmologists and long waiting lists for patients challenge the organization of ophthalmic care. Tasks that require less specialized skills, like the monitoring of stable (well controlled) glaucoma patients could be substituted from ophthalmologists to other

  13. Measuring structural similarity in large online networks.

    Science.gov (United States)

    Shi, Yongren; Macy, Michael

    2016-09-01

    Structural similarity based on bipartite graphs can be used to detect meaningful communities, but the networks have been tiny compared to massive online networks. Scalability is important in applications involving tens of millions of individuals with highly skewed degree distributions. Simulation analysis holding underlying similarity constant shows that two widely used measures - Jaccard index and cosine similarity - are biased by the distribution of out-degree in web-scale networks. However, an alternative measure, the Standardized Co-incident Ratio (SCR), is unbiased. We apply SCR to members of Congress, musical artists, and professional sports teams to show how massive co-following on Twitter can be used to map meaningful affiliations among cultural entities, even in the absence of direct connections to one another. Our results show how structural similarity can be used to map cultural alignments and demonstrate the potential usefulness of social media data in the study of culture, politics, and organizations across the social and behavioral sciences. Copyright © 2016 Elsevier Inc. All rights reserved.

  14. Optimization of Pipe Networks

    DEFF Research Database (Denmark)

    Hansen, C. T.; Madsen, Kaj; Nielsen, Hans Bruun

    1991-01-01

    algorithm using successive linear programming is presented. The performance of the algorithm is illustrated by optimizing a network with 201 pipes and 172 nodes. It is concluded that the new algorithm seems to be very efficient and stable, and that it always finds a solution with a cost near the best...

  15. Network structure and institutional complexity in an ecology of water management games

    Directory of Open Access Journals (Sweden)

    Mark Lubell

    2014-12-01

    Full Text Available Social-ecological systems are governed by a complex of ecology of games featuring multiple actors, policy institutions, and issues, and not just single institutions operating in isolation. We update Long's (1958 ecology of games to analyze the coordinating roles of actors and institutions in the context of the ecology of water management games in San Francisco Bay, California. The ecology of games is operationalized as a bipartite network with actors participating in institutions, and exponential random graph models are used to test hypotheses about the structural features of the network. We found that policy coordination is facilitated mostly by federal and state agencies and collaborative institutions that span geographic boundaries. Network configurations associated with closure show the most significant departures from the predicted model values, consistent with the Berardo and Scholz (2010 "risk hypothesis" that closure is important for solving cooperation problems.

  16. Spectra of Adjacency Matrices in Networks of Extreme Introverts and Extroverts

    Science.gov (United States)

    Bassler, Kevin E.; Ezzatabadipour, Mohammadmehdi; Zia, R. K. P.

    Many interesting properties were discovered in recent studies of preferred degree networks, suitable for describing social behavior of individuals who tend to prefer a certain number of contacts. In an extreme version (coined the XIE model), introverts always cut links while extroverts always add them. While the intra-group links are static, the cross-links are dynamic and lead to an ensemble of bipartite graphs, with extraordinary correlations between elements of the incidence matrix: nij In the steady state, this system can be regarded as one in thermal equilibrium with long-ranged interactions between the nij's, and displays an extreme Thouless effect. Here, we report simulation studies of a different perspective of networks, namely, the spectra associated with this ensemble of adjacency matrices {aij } . As a baseline, we first consider the spectra associated with a simple random (Erdős-Rényi) ensemble of bipartite graphs, where simulation results can be understood analytically. Work supported by the NSF through Grant DMR-1507371.

  17. East African cassava mosaic-like viruses from Africa to Indian ocean islands: molecular diversity, evolutionary history and geographical dissemination of a bipartite begomovirus

    Directory of Open Access Journals (Sweden)

    De Bruyn Alexandre

    2012-11-01

    Full Text Available Abstract Background Cassava (Manihot esculenta is a major food source for over 200 million sub-Saharan Africans. Unfortunately, its cultivation is severely hampered by cassava mosaic disease (CMD. Caused by a complex of bipartite cassava mosaic geminiviruses (CMG species (Family: Geminivirideae; Genus: Begomovirus CMD has been widely described throughout Africa and it is apparent that CMG's are expanding their geographical distribution. Determining where and when CMG movements have occurred could help curtail its spread and reveal the ecological and anthropic factors associated with similar viral invasions. We applied Bayesian phylogeographic inference and recombination analyses to available and newly described CMG sequences to reconstruct a plausible history of CMG diversification and migration between Africa and South West Indian Ocean (SWIO islands. Results The isolation and analysis of 114 DNA-A and 41 DNA-B sequences demonstrated the presence of three CMG species circulating in the Comoros and Seychelles archipelagos (East African cassava mosaic virus, EACMV; East African cassava mosaic Kenya virus, EACMKV; and East African cassava mosaic Cameroon virus, EACMCV. Phylogeographic analyses suggest that CMG’s presence on these SWIO islands is probably the result of at least four independent introduction events from mainland Africa occurring between 1988 and 2009. Amongst the islands of the Comoros archipelago, two major migration pathways were inferred: One from Grande Comore to Mohéli and the second from Mayotte to Anjouan. While only two recombination events characteristic of SWIO islands isolates were identified, numerous re-assortments events were detected between EACMV and EACMKV, which seem to almost freely interchange their genome components. Conclusions Rapid and extensive virus spread within the SWIO islands was demonstrated for three CMG complex species. Strong evolutionary or ecological interaction between CMG species may explain

  18. Learning Networks, Networked Learning

    NARCIS (Netherlands)

    Sloep, Peter; Berlanga, Adriana

    2010-01-01

    Sloep, P. B., & Berlanga, A. J. (2011). Learning Networks, Networked Learning [Redes de Aprendizaje, Aprendizaje en Red]. Comunicar, XIX(37), 55-63. Retrieved from http://dx.doi.org/10.3916/C37-2011-02-05

  19. Toward Practical Secure Stable Matching

    Directory of Open Access Journals (Sweden)

    Riazi M. Sadegh

    2017-01-01

    Full Text Available The Stable Matching (SM algorithm has been deployed in many real-world scenarios including the National Residency Matching Program (NRMP and financial applications such as matching of suppliers and consumers in capital markets. Since these applications typically involve highly sensitive information such as the underlying preference lists, their current implementations rely on trusted third parties. This paper introduces the first provably secure and scalable implementation of SM based on Yao’s garbled circuit protocol and Oblivious RAM (ORAM. Our scheme can securely compute a stable match for 8k pairs four orders of magnitude faster than the previously best known method. We achieve this by introducing a compact and efficient sub-linear size circuit. We even further decrease the computation cost by three orders of magnitude by proposing a novel technique to avoid unnecessary iterations in the SM algorithm. We evaluate our implementation for several problem sizes and plan to publish it as open-source.

  20. Use of Spacecraft Data to Drive Regions on Mars where Liquid Water would be Stable

    Science.gov (United States)

    Lobitz, Brad; Wood, Byron L.; Averner, Maurice M.; McKay, Christopher P.; MacElroy, Robert D.

    2001-01-01

    Combining Viking pressure and temperature data with Mars Orbital Laser Altimeter (MOLA) topography data we have computed the fraction of the martian year during which pressure and temperature allow for liquid water to be stable on the martian surface. We find that liquid water would be stable within the Hellas and Argyre basin and over the northern lowlands equatorward of about 40 degrees. The location with the maximum period of stable conditions for liquid water is in the southeastern portion of Utopia Planitia where 34% of the year liquid water would be stable if it was present. Locations of stability appear to correlate with the distribution of valley networks.

  1. Towards stable acceleration in LINACS

    CERN Document Server

    Dubrovskiy, A D

    2014-01-01

    Ultra-stable and -reproducible high-energy particle beams with short bunches are needed in novel linear accelerators and, in particular, in the Compact Linear Collider CLIC. A passive beam phase stabilization system based on a bunch compression with a negative transfer matrix element R56 and acceleration at a positive off-crest phase is proposed. The motivation and expected advantages of the proposed scheme are outlined.

  2. From network structure to network reorganization: implications for adult neurogenesis

    Science.gov (United States)

    Schneider-Mizell, Casey M.; Parent, Jack M.; Ben-Jacob, Eshel; Zochowski, Michal R.; Sander, Leonard M.

    2010-12-01

    Networks can be dynamical systems that undergo functional and structural reorganization. One example of such a process is adult hippocampal neurogenesis, in which new cells are continuously born and incorporate into the existing network of the dentate gyrus region of the hippocampus. Many of these introduced cells mature and become indistinguishable from established neurons, joining the existing network. Activity in the network environment is known to promote birth, survival and incorporation of new cells. However, after epileptogenic injury, changes to the connectivity structure around the neurogenic niche are known to correlate with aberrant neurogenesis. The possible role of network-level changes in the development of epilepsy is not well understood. In this paper, we use a computational model to investigate how the structural and functional outcomes of network reorganization, driven by addition of new cells during neurogenesis, depend on the original network structure. We find that there is a stable network topology that allows the network to incorporate new neurons in a manner that enhances activity of the persistently active region, but maintains global network properties. In networks having other connectivity structures, new cells can greatly alter the distribution of firing activity and destroy the initial activity patterns. We thus find that new cells are able to provide focused enhancement of network only for small-world networks with sufficient inhibition. Network-level deviations from this topology, such as those caused by epileptogenic injury, can set the network down a path that develops toward pathological dynamics and aberrant structural integration of new cells.

  3. From network structure to network reorganization: implications for adult neurogenesis

    International Nuclear Information System (INIS)

    Schneider-Mizell, Casey M; Zochowski, Michal R; Sander, Leonard M; Parent, Jack M; Ben-Jacob, Eshel

    2010-01-01

    Networks can be dynamical systems that undergo functional and structural reorganization. One example of such a process is adult hippocampal neurogenesis, in which new cells are continuously born and incorporate into the existing network of the dentate gyrus region of the hippocampus. Many of these introduced cells mature and become indistinguishable from established neurons, joining the existing network. Activity in the network environment is known to promote birth, survival and incorporation of new cells. However, after epileptogenic injury, changes to the connectivity structure around the neurogenic niche are known to correlate with aberrant neurogenesis. The possible role of network-level changes in the development of epilepsy is not well understood. In this paper, we use a computational model to investigate how the structural and functional outcomes of network reorganization, driven by addition of new cells during neurogenesis, depend on the original network structure. We find that there is a stable network topology that allows the network to incorporate new neurons in a manner that enhances activity of the persistently active region, but maintains global network properties. In networks having other connectivity structures, new cells can greatly alter the distribution of firing activity and destroy the initial activity patterns. We thus find that new cells are able to provide focused enhancement of network only for small-world networks with sufficient inhibition. Network-level deviations from this topology, such as those caused by epileptogenic injury, can set the network down a path that develops toward pathological dynamics and aberrant structural integration of new cells

  4. The influence of tie strength on evolutionary games on networks: An empirical investigation

    Science.gov (United States)

    Buesser, Pierre; Peña, Jorge; Pestelacci, Enea; Tomassini, Marco

    2011-11-01

    Extending previous work on unweighted networks, we present here a systematic numerical investigation of standard evolutionary games on weighted networks. In the absence of any reliable model for generating weighted social networks, we attribute weights to links in a few ways supported by empirical data ranging from totally uncorrelated to weighted bipartite networks. The results of the extensive simulation work on standard complex network models show that, except in a case that does not seem to be common in social networks, taking the tie strength into account does not change in a radical manner the long-run steady-state behavior of the studied games. Besides model networks, we also included a real-life case drawn from a coauthorship network. In this case also, taking the weights into account only changes the results slightly with respect to the raw unweighted graph, although to draw more reliable conclusions on real social networks many more cases should be studied as these weighted networks become available.

  5. Influence of the bipartite scrotum on the testicular and scrotal temperatures in goats Influência do escroto bipartido sobre as temperaturas dos testículos e escroto em caprinos

    Directory of Open Access Journals (Sweden)

    Antonio A.N. Machado Júnior

    2009-10-01

    Full Text Available The influence of the scrotal bipartition and of the year period on the scrotal-testicular thermal regulation was evaluated in male goats raised in Piaui State, Brazil. Eighteen male goats at mating age were accomplished in this study and arranged into three Groups (6 animals each obeying the classification as goats presenting no scrotal bipartition (Group I, goats showing scrotal bipartition at 50% of the testicular length (Group II, and goats with more than 50% of scrotal bipartition (Group III. The scrotal, testicular and spermatic funiculi temperatures were evaluated invasively with the aid of a digital thermometer and non-invasive with a pyrometer in the proximal, medial and distal portion. The data were acquired during the dry (October-November and rainy (February-March period of the year, measured in two shifts: morning (6h00-7h00 and afternoon (14h00-15h00. The results were submitted to variance analysis (ANOVA following the SNK test for average comparison (p50%. It is possible to conclude that with the experimental conditions applied on this study, the level of scrotal bipartition and the climatic conditions interfere with the scrotal-testicular thermal regulation in goats.O objetivo deste trabalho foi avaliar a influência do grau de bipartição escrotal e do período do ano sobre a termorregulação escroto-testicular em caprinos criados no Estado do Piauí. Foram utilizados 18 reprodutores caprinos machos, divididos em três grupos de seis animais: O Grupo I contendo caprinos com escroto simples, o Grupo II, caprinos com escroto bipartido até 50% do comprimento testicular e o Grupo III, caprinos com bipartição superior a 50% do comprimento testicular. Os parâmetros avaliados foram as temperaturas do escroto, testículo e funículo espermático, obtidas de forma invasiva, com um termômetro digital termoacoplável, e não invasiva, com um pirômetro, nos terços proximal, médio e distal. Os dados foram coletados nos per

  6. Entanglement transfer between bipartite systems

    International Nuclear Information System (INIS)

    Bougouffa, Smail; Ficek, Zbigniew

    2012-01-01

    The problem of a controlled transfer of an entanglement initially encoded into two two-level atoms that are successively sent through two single-mode cavities is investigated. The atoms and the cavity modes form a four-qubit system and we demonstrate the conditions under which the initial entanglement encoded into the atoms can be completely transferred to other pairs of qubits. We find that in the case of non-zero detuning between the atomic transition frequencies and the cavity mode frequencies, no complete transfer of the initial entanglement is possible to any of the other pairs of qubits. In the case of exact resonance and equal coupling strengths of the atoms to the cavity modes, an initial maximally entangled state of the atoms can be completely transferred to the cavity modes. Complete transfer of the entanglement is restricted to the cavity modes, with transfer to the other pairs being limited to 50%. We find that complete transfer of an initial entanglement to other pairs of qubits may take place if the initial state is not the maximally entangled state and the atoms couple to the cavity modes with unequal strengths. Depending on the ratio between the coupling strengths, optimal entanglement can be created between the atoms and one of the cavity modes.

  7. A network of networks.

    Science.gov (United States)

    Iedema, Rick; Verma, Raj; Wutzke, Sonia; Lyons, Nigel; McCaughan, Brian

    2017-04-10

    Purpose To further our insight into the role of networks in health system reform, the purpose of this paper is to investigate how one agency, the NSW Agency for Clinical Innovation (ACI), and the multiple networks and enabling resources that it encompasses, govern, manage and extend the potential of networks for healthcare practice improvement. Design/methodology/approach This is a case study investigation which took place over ten months through the first author's participation in network activities and discussions with the agency's staff about their main objectives, challenges and achievements, and with selected services around the state of New South Wales to understand the agency's implementation and large system transformation activities. Findings The paper demonstrates that ACI accommodates multiple networks whose oversight structures, self-organisation and systems change approaches combined in dynamic ways, effectively yield a diversity of network governances. Further, ACI bears out a paradox of "centralised decentralisation", co-locating agents of innovation with networks of implementation and evaluation expertise. This arrangement strengthens and legitimates the role of the strategic hybrid - the healthcare professional in pursuit of change and improvement, and enhances their influence and impact on the wider system. Research limitations/implications While focussing the case study on one agency only, this study is unique as it highlights inter-network connections. Contributing to the literature on network governance, this paper identifies ACI as a "network of networks" through which resources, expectations and stakeholder dynamics are dynamically and flexibly mediated and enhanced. Practical implications The co-location of and dynamic interaction among clinical networks may create synergies among networks, nurture "strategic hybrids", and enhance the impact of network activities on health system reform. Social implications Network governance requires more

  8. Non-essential genes form the hubs of genome scale protein function and environmental gene expression networks in Salmonella enterica serovar Typhimurium

    DEFF Research Database (Denmark)

    Rosenkrantz, Jesper T.; Aarts, Henk; Abee, Tjakko

    2013-01-01

    Background: Salmonella Typhimurium is an important pathogen of human and animals. It shows a broad growth range and survives in harsh conditions. The aim of this study was to analyze transcriptional responses to a number of growth and stress conditions as well as the relationship of metabolic...... genes under a number of growth and stress conditions were used to construct a bipartite network connecting culture conditions and significantly regulated genes (transcriptional network). Also, a genome scale network was constructed for strain LT2. The latter connected genes with metabolic pathways...... pathways and/or cell functions at the genome-scale-level by network analysis, and further to explore whether highly connected genes ( hubs) in these networks were essential for growth, stress adaptation and virulence. Results: De novo generated as well as published transcriptional data for 425 selected...

  9. A network flow algorithm to position tiles for LAMOST

    International Nuclear Information System (INIS)

    Li Guangwei; Zhao Gang

    2009-01-01

    We introduce the network flow algorithm used by the Sloan Digital Sky Survey (SDSS) into the sky survey of the Large sky Area Multi-Object fiber Spectroscopic Telescope (LAMOST) to position tiles. Because fibers in LAMOST's focal plane are distributed uniformly, we cannot use SDSS' method directly. To solve this problem, firstly we divide the sky into many small blocks, and we also assume that all the targets that are in the same block have the same position, which is the center of the block. Secondly, we give a value to limit the number of the targets that the LAMOST focal plane can collect in one square degree so that it cannot collect too many targets in one small block. Thirdly, because the network flow algorithm used in this paper is a bipartite network, we do not use the general solution algorithm that was used by SDSS. Instead, we give our new faster solution method for this special network. Compared with the Convergent Mean Shift Algorithm, the network flow algorithm can decrease observation times with improved mean imaging quality. This algorithm also has a very fast running speed. It can distribute millions of targets in a few minutes using a common personal computer.

  10. Computing Tutte polynomials of contact networks in classrooms

    Science.gov (United States)

    Hincapié, Doracelly; Ospina, Juan

    2013-05-01

    Objective: The topological complexity of contact networks in classrooms and the potential transmission of an infectious disease were analyzed by sex and age. Methods: The Tutte polynomials, some topological properties and the number of spanning trees were used to algebraically compute the topological complexity. Computations were made with the Maple package GraphTheory. Published data of mutually reported social contacts within a classroom taken from primary school, consisting of children in the age ranges of 4-5, 7-8 and 10-11, were used. Results: The algebraic complexity of the Tutte polynomial and the probability of disease transmission increases with age. The contact networks are not bipartite graphs, gender segregation was observed especially in younger children. Conclusion: Tutte polynomials are tools to understand the topology of the contact networks and to derive numerical indexes of such topologies. It is possible to establish relationships between the Tutte polynomial of a given contact network and the potential transmission of an infectious disease within such network

  11. Stable Hemiaminals: 2-Aminopyrimidine Derivatives

    Directory of Open Access Journals (Sweden)

    Anna Kwiecień

    2015-08-01

    Full Text Available Stable hemiaminals can be obtained in the one-pot reaction between 2-aminopyrimidine and nitrobenzaldehyde derivatives. Ten new hemiaminals have been obtained, six of them in crystal state. The molecular stability of these intermediates results from the presence of both electron-withdrawing nitro groups as substituents on the phenyl ring and pyrimidine ring, so no further stabilisation by intramolecular interaction is required. Hemiaminal molecules possess a tetrahedral carbon atom constituting a stereogenic centre. As the result of crystallisation in centrosymmetric space groups both enantiomers are present in the crystal structure.

  12. Organic synthesis with stable isotopes

    International Nuclear Information System (INIS)

    Daub, G.H.; Kerr, V.N.; Williams, D.L.; Whaley, T.W.

    1978-01-01

    Some general considerations concerning organic synthesis with stable isotopes are presented. Illustrative examples are described and discussed. The examples include DL-2-amino-3-methyl- 13 C-butanoic-3,4- 13 C 2 acid (DL-valine- 13 C 3 ); methyl oleate-1- 13 C; thymine-2,6- 13 C 2 ; 2-aminoethanesulfonic- 13 C acid (taurine- 13 C); D-glucose-6- 13 C; DL-2-amino-3-methylpentanoic-3,4- 13 C 2 acid (DL-isoleucine- 13 C 2 ); benzidine- 15 N 2 ; and 4-ethylsulfonyl-1-naphthalene-sulfonamide- 15 N

  13. Stable agents for imaging investigations

    International Nuclear Information System (INIS)

    Tofe, A.J.

    1976-01-01

    This invention concerns highly stable compounds useful in preparing technetium 99m based scintiscanning exploration agents. The compounds of this invention include a pertechnetate reducing agent or a solution of oxidized pertechnetate and an efficient proportion, sufficient to stabilize the compounds in the presence of oxygen and of radiolysis products, of ascorbic acid or a pharmaceutically acceptable salt or ester of this acid. The invention also concerns a perfected process for preparing a technetium based exploration agent, consisting in codissolving the ascorbic acid or a pharmaceutically acceptable salt or ester of such an acid and a pertechnetate reducing agent in a solution of oxidized pertechnetate [fr

  14. Popularity and Novelty Dynamics in Evolving Networks.

    Science.gov (United States)

    Abbas, Khushnood; Shang, Mingsheng; Abbasi, Alireza; Luo, Xin; Xu, Jian Jun; Zhang, Yu-Xia

    2018-04-20

    Network science plays a big role in the representation of real-world phenomena such as user-item bipartite networks presented in e-commerce or social media platforms. It provides researchers with tools and techniques to solve complex real-world problems. Identifying and predicting future popularity and importance of items in e-commerce or social media platform is a challenging task. Some items gain popularity repeatedly over time while some become popular and novel only once. This work aims to identify the key-factors: popularity and novelty. To do so, we consider two types of novelty predictions: items appearing in the popular ranking list for the first time; and items which were not in the popular list in the past time window, but might have been popular before the recent past time window. In order to identify the popular items, a careful consideration of macro-level analysis is needed. In this work we propose a model, which exploits item level information over a span of time to rank the importance of the item. We considered ageing or decay effect along with the recent link-gain of the items. We test our proposed model on four various real-world datasets using four information retrieval based metrics.

  15. Dynamic Modeling of Systemic Risk in Financial Networks

    Science.gov (United States)

    Avakian, Adam

    Modern financial networks are complicated structures that can contain multiple types of nodes and connections between those nodes. Banks, governments and even individual people weave into an intricate network of debt, risk correlations and many other forms of interconnectedness. We explore multiple types of financial network models with a focus on understanding the dynamics and causes of cascading failures in such systems. In particular, we apply real-world data from multiple sources to these models to better understand real-world financial networks. We use the results of the Federal Reserve "Banking Organization Systemic Risk Report" (FR Y-15), which surveys the largest US banks on their level of interconnectedness, to find relationships between various measures of network connectivity and systemic risk in the US financial sector. This network model is then stress-tested under a number of scenarios to determine systemic risks inherent in the various network structures. We also use detailed historical balance sheet data from the Venezuelan banking system to build a bipartite network model and find relationships between the changing network structure over time and the response of the system to various shocks. We find that the relationship between interconnectedness and systemic risk is highly dependent on the system and model but that it is always a significant one. These models are useful tools that add value to regulators in creating new measurements of systemic risk in financial networks. These models could be used as macroprudential tools for monitoring the health of the entire banking system as a whole rather than only of individual banks.

  16. Linking biodiversity to mutualistic networks – woody species and ectomycorrhizal fungi

    Directory of Open Access Journals (Sweden)

    Ecaterina Fodor

    2013-07-01

    Full Text Available Mutualistic interactions are currently mapped by bipartite networks with particular architecture and properties. The mycorrhizae connect the trees and permit them to share resources, therefore relaxing the competition. Ectomycorrhizal macrofungi associated with woody species (Quercus robur, Q. cerris, Q. petraea, Tilia tomentosa, Carpinus betulus, Corylus avellana, and Q. pubescens growing in a temperate, broadleaved mixed forest, from a hilly area near the city of Cluj–Napoca, central Romania were included in a bipartite mutualistic network. Community structure was investigated using several network metrics, modularity and nestedness algorithms in conjunction with C-score index cluster analysis and nonmetric multidimensional scaling (the Kulczynski similarity was index used as most appropriate metric selected by minimal stress criterion. The results indicate that the network presents high asymmetry (hosts are outnumbered by mycobionts at a great extent, high connectance, low modularity, and high nestedness, competition playing a secondary role in community assemblage (non significant difference between simulated and observed C-score. The nestedness pattern is non-random and is comparable to previously published results for other similar interactions containing plants. In the proposed network, woody species function exclusively as generalists. Modularity analysis is a finer tool were identifying species roles than centrality measures, however, the two types of algorithms permit the separation of species according to their roles as for example connectors (generalist species and ultraperipheral species (specialists. Supergeneralist woody species function as hubs for the diverse ectomycorrhizal community while supergeneralist ectomycorrhizal fungi glue the hubs into a coherent aggregate. 

  17. What do interaction network metrics tell us about specialization and biological traits?

    Science.gov (United States)

    Blüthgen, Nico; Fründ, Jochen; Vázquez, Diego P; Menzel, Florian

    2008-12-01

    The structure of ecological interaction networks is often interpreted as a product of meaningful ecological and evolutionary mechanisms that shape the degree of specialization in community associations. However, here we show that both unweighted network metrics (connectance, nestedness, and degree distribution) and weighted network metrics (interaction evenness, interaction strength asymmetry) are strongly constrained and biased by the number of observations. Rarely observed species are inevitably regarded as "specialists," irrespective of their actual associations, leading to biased estimates of specialization. Consequently, a skewed distribution of species observation records (such as the lognormal), combined with a relatively low sampling density typical for ecological data, already generates a "nested" and poorly "connected" network with "asymmetric interaction strengths" when interactions are neutral. This is confirmed by null model simulations of bipartite networks, assuming that partners associate randomly in the absence of any specialization and any variation in the correspondence of biological traits between associated species (trait matching). Variation in the skewness of the frequency distribution fundamentally changes the outcome of network metrics. Therefore, interpretation of network metrics in terms of fundamental specialization and trait matching requires an appropriate control for such severe constraints imposed by information deficits. When using an alternative approach that controls for these effects, most natural networks of mutualistic or antagonistic systems show a significantly higher degree of reciprocal specialization (exclusiveness) than expected under neutral conditions. A higher exclusiveness is coherent with a tighter coevolution and suggests a lower ecological redundancy than implied by nested networks.

  18. Stable cosmology in chameleon bigravity

    Science.gov (United States)

    De Felice, Antonio; Mukohyama, Shinji; Oliosi, Michele; Watanabe, Yota

    2018-02-01

    The recently proposed chameleonic extension of bigravity theory, by including a scalar field dependence in the graviton potential, avoids several fine-tunings found to be necessary in usual massive bigravity. In particular it ensures that the Higuchi bound is satisfied at all scales, that no Vainshtein mechanism is needed to satisfy Solar System experiments, and that the strong coupling scale is always above the scale of cosmological interest all the way up to the early Universe. This paper extends the previous work by presenting a stable example of cosmology in the chameleon bigravity model. We find a set of initial conditions and parameters such that the derived stability conditions on general flat Friedmann background are satisfied at all times. The evolution goes through radiation-dominated, matter-dominated, and de Sitter eras. We argue that the parameter space allowing for such a stable evolution may be large enough to encompass an observationally viable evolution. We also argue that our model satisfies all known constraints due to gravitational wave observations so far and thus can be considered as a unique testing ground of gravitational wave phenomenologies in bimetric theories of gravity.

  19. Innovation networking between stability and political dynamics

    DEFF Research Database (Denmark)

    Koch, Christian

    2004-01-01

    This contribution views innovation as a social activity of building networks, using software product development in multicompany alliances and networks as example. Innovation networks are frequently understood as quite stable arrangements characterised by high trust among the participants. The aim...... of the contribution is to challenge and transcend these notions and develop an understanding of innovation networks as an interplay between stable and dynamic elements, where political processes in innovation are much more than a disruptive and even a counterproductive feature. It reviews the growing number...... is a segment-collaboration between a few manufacturing companies and a software house, the other a complex and extensive innovation network. These studies show how negotiations, shifting positions of players, mobilising stable elements of the network, when developing new ones, and interplays between internal...

  20. Stable isotope mass spectrometry in petroleum exploration

    International Nuclear Information System (INIS)

    Mathur, Manju

    1997-01-01

    The stable isotope mass spectrometry plays an important role to evaluate the stable isotopic composition of hydrocarbons. The isotopic ratios of certain elements in petroleum samples reflect certain characteristics which are useful for petroleum exploration

  1. Stable rotating dipole solitons in nonlocal media

    DEFF Research Database (Denmark)

    Lopez-Aguayo, Servando; Skupin, Stefan; Desyatnikov, Anton S.

    2006-01-01

    We present the first example of stable rotating two-soliton bound states in nonlinear optical media with nonlocal response. We show that, in contrast to media with local response, nonlocality opens possibilities to generate stable azimuthons.......We present the first example of stable rotating two-soliton bound states in nonlinear optical media with nonlocal response. We show that, in contrast to media with local response, nonlocality opens possibilities to generate stable azimuthons....

  2. Food Web Designer: a flexible tool to visualize interaction networks.

    Science.gov (United States)

    Sint, Daniela; Traugott, Michael

    Species are embedded in complex networks of ecological interactions and assessing these networks provides a powerful approach to understand what the consequences of these interactions are for ecosystem functioning and services. This is mandatory to develop and evaluate strategies for the management and control of pests. Graphical representations of networks can help recognize patterns that might be overlooked otherwise. However, there is a lack of software which allows visualizing these complex interaction networks. Food Web Designer is a stand-alone, highly flexible and user friendly software tool to quantitatively visualize trophic and other types of bipartite and tripartite interaction networks. It is offered free of charge for use on Microsoft Windows platforms. Food Web Designer is easy to use without the need to learn a specific syntax due to its graphical user interface. Up to three (trophic) levels can be connected using links cascading from or pointing towards the taxa within each level to illustrate top-down and bottom-up connections. Link width/strength and abundance of taxa can be quantified, allowing generating fully quantitative networks. Network datasets can be imported, saved for later adjustment and the interaction webs can be exported as pictures for graphical display in different file formats. We show how Food Web Designer can be used to draw predator-prey and host-parasitoid food webs, demonstrating that this software is a simple and straightforward tool to graphically display interaction networks for assessing pest control or any other type of interaction in both managed and natural ecosystems from an ecological network perspective.

  3. Uses of stable isotopes in fish ecology

    Science.gov (United States)

    Analyses of fish tissues (other than otoliths) for stable isotope ratios can provide substantial information on fish ecology, including physiological ecology. Stable isotopes of nitrogen and carbon frequently are used to determine the mix of diet sources for consumers. Stable i...

  4. Periodicity of the stable isotopes

    CERN Document Server

    Boeyens, J C A

    2003-01-01

    It is demonstrated that all stable (non-radioactive) isotopes are formally interrelated as the products of systematically adding alpha particles to four elementary units. The region of stability against radioactive decay is shown to obey a general trend based on number theory and contains the periodic law of the elements as a special case. This general law restricts the number of what may be considered as natural elements to 100 and is based on a proton:neutron ratio that matches the golden ratio, characteristic of biological and crystal growth structures. Different forms of the periodic table inferred at other proton:neutron ratios indicate that the electronic configuration of atoms is variable and may be a function of environmental pressure. Cosmic consequences of this postulate are examined. (author)

  5. Stable States of Biological Organisms

    Science.gov (United States)

    Yukalov, V. I.; Sornette, D.; Yukalova, E. P.; Henry, J.-Y.; Cobb, J. P.

    2009-04-01

    A novel model of biological organisms is advanced, treating an organism as a self-consistent system subject to a pathogen flux. The principal novelty of the model is that it describes not some parts, but a biological organism as a whole. The organism is modeled by a five-dimensional dynamical system. The organism homeostasis is described by the evolution equations for five interacting components: healthy cells, ill cells, innate immune cells, specific immune cells, and pathogens. The stability analysis demonstrates that, in a wide domain of the parameter space, the system exhibits robust structural stability. There always exist four stable stationary solutions characterizing four qualitatively differing states of the organism: alive state, boundary state, critical state, and dead state.

  6. Theory of stable allocations II

    Directory of Open Access Journals (Sweden)

    Pantelić Svetlana

    2015-01-01

    Full Text Available The Swedish Royal Academy awarded the 2012 Nobel Prize in Economics to Lloyd Shapley and Alvin Roth, for the theory of stable allocations and the practice of market design. These two American researchers worked independently from each other, combining basic theory and empirical investigations. Through their experiments and practical design they generated a flourishing field of research and improved the performance of many markets. Shapley provided the fundamental theoretical contribution to this field of research, whereas Roth, a professor at the Harvard University in Boston, developed and upgraded these theoretical investigations by applying them to the American market of medical doctors. Namely, their research helps explain the market processes at work, for instance, when doctors are assigned to hospitals, students to schools and human organs for transplant to recipients.

  7. Stable massive particles at colliders

    Energy Technology Data Exchange (ETDEWEB)

    Fairbairn, M.; /Stockholm U.; Kraan, A.C.; /Pennsylvania U.; Milstead, D.A.; /Stockholm U.; Sjostrand, T.; /Lund U.; Skands, P.; /Fermilab; Sloan, T.; /Lancaster U.

    2006-11-01

    We review the theoretical motivations and experimental status of searches for stable massive particles (SMPs) which could be sufficiently long-lived as to be directly detected at collider experiments. The discovery of such particles would address a number of important questions in modern physics including the origin and composition of dark matter in the universe and the unification of the fundamental forces. This review describes the techniques used in SMP-searches at collider experiments and the limits so far obtained on the production of SMPs which possess various colour, electric and magnetic charge quantum numbers. We also describe theoretical scenarios which predict SMPs, the phenomenology needed to model their production at colliders and interactions with matter. In addition, the interplay between collider searches and open questions in cosmology such as dark matter composition are addressed.

  8. Invariant scattering convolution networks.

    Science.gov (United States)

    Bruna, Joan; Mallat, Stéphane

    2013-08-01

    A wavelet scattering network computes a translation invariant image representation which is stable to deformations and preserves high-frequency information for classification. It cascades wavelet transform convolutions with nonlinear modulus and averaging operators. The first network layer outputs SIFT-type descriptors, whereas the next layers provide complementary invariant information that improves classification. The mathematical analysis of wavelet scattering networks explains important properties of deep convolution networks for classification. A scattering representation of stationary processes incorporates higher order moments and can thus discriminate textures having the same Fourier power spectrum. State-of-the-art classification results are obtained for handwritten digits and texture discrimination, with a Gaussian kernel SVM and a generative PCA classifier.

  9. Stable Treemaps via Local Moves.

    Science.gov (United States)

    Sondag, Max; Speckmann, Bettina; Verbeek, Kevin

    2018-01-01

    Treemaps are a popular tool to visualize hierarchical data: items are represented by nested rectangles and the area of each rectangle corresponds to the data being visualized for this item. The visual quality of a treemap is commonly measured via the aspect ratio of the rectangles. If the data changes, then a second important quality criterion is the stability of the treemap: how much does the treemap change as the data changes. We present a novel stable treemapping algorithm that has very high visual quality. Whereas existing treemapping algorithms generally recompute the treemap every time the input changes, our algorithm changes the layout of the treemap using only local modifications. This approach not only gives us direct control over stability, but it also allows us to use a larger set of possible layouts, thus provably resulting in treemaps of higher visual quality compared to existing algorithms. We further prove that we can reach all possible treemap layouts using only our local modifications. Furthermore, we introduce a new measure for stability that better captures the relative positions of rectangles. We finally show via experiments on real-world data that our algorithm outperforms existing treemapping algorithms also in practice on either visual quality and/or stability. Our algorithm scores high on stability regardless of whether we use an existing stability measure or our new measure.

  10. Declarative Networking

    CERN Document Server

    Loo, Boon Thau

    2012-01-01

    Declarative Networking is a programming methodology that enables developers to concisely specify network protocols and services, which are directly compiled to a dataflow framework that executes the specifications. Declarative networking proposes the use of a declarative query language for specifying and implementing network protocols, and employs a dataflow framework at runtime for communication and maintenance of network state. The primary goal of declarative networking is to greatly simplify the process of specifying, implementing, deploying and evolving a network design. In addition, decla

  11. Contagion on complex networks with persuasion

    Science.gov (United States)

    Huang, Wei-Min; Zhang, Li-Jie; Xu, Xin-Jian; Fu, Xinchu

    2016-03-01

    The threshold model has been widely adopted as a classic model for studying contagion processes on social networks. We consider asymmetric individual interactions in social networks and introduce a persuasion mechanism into the threshold model. Specifically, we study a combination of adoption and persuasion in cascading processes on complex networks. It is found that with the introduction of the persuasion mechanism, the system may become more vulnerable to global cascades, and the effects of persuasion tend to be more significant in heterogeneous networks than those in homogeneous networks: a comparison between heterogeneous and homogeneous networks shows that under weak persuasion, heterogeneous networks tend to be more robust against random shocks than homogeneous networks; whereas under strong persuasion, homogeneous networks are more stable. Finally, we study the effects of adoption and persuasion threshold heterogeneity on systemic stability. Though both heterogeneities give rise to global cascades, the adoption heterogeneity has an overwhelmingly stronger impact than the persuasion heterogeneity when the network connectivity is sufficiently dense.

  12. How structurally stable are global socioeconomic systems?

    Science.gov (United States)

    Saavedra, Serguei; Rohr, Rudolf P; Gilarranz, Luis J; Bascompte, Jordi

    2014-11-06

    The stability analysis of socioeconomic systems has been centred on answering whether small perturbations when a system is in a given quantitative state will push the system permanently to a different quantitative state. However, typically the quantitative state of socioeconomic systems is subject to constant change. Therefore, a key stability question that has been under-investigated is how strongly the conditions of a system itself can change before the system moves to a qualitatively different behaviour, i.e. how structurally stable the systems is. Here, we introduce a framework to investigate the structural stability of socioeconomic systems formed by a network of interactions among agents competing for resources. We measure the structural stability of the system as the range of conditions in the distribution and availability of resources compatible with the qualitative behaviour in which all the constituent agents can be self-sustained across time. To illustrate our framework, we study an empirical representation of the global socioeconomic system formed by countries sharing and competing for multinational companies used as proxy for resources. We demonstrate that the structural stability of the system is inversely associated with the level of competition and the level of heterogeneity in the distribution of resources. Importantly, we show that the qualitative behaviour of the observed global socioeconomic system is highly sensitive to changes in the distribution of resources. We believe that this work provides a methodological basis to develop sustainable strategies for socioeconomic systems subject to constantly changing conditions. © 2014 The Author(s) Published by the Royal Society. All rights reserved.

  13. Network class superposition analyses.

    Directory of Open Access Journals (Sweden)

    Carl A B Pearson

    Full Text Available Networks are often used to understand a whole system by modeling the interactions among its pieces. Examples include biomolecules in a cell interacting to provide some primary function, or species in an environment forming a stable community. However, these interactions are often unknown; instead, the pieces' dynamic states are known, and network structure must be inferred. Because observed function may be explained by many different networks (e.g., ≈ 10(30 for the yeast cell cycle process, considering dynamics beyond this primary function means picking a single network or suitable sample: measuring over all networks exhibiting the primary function is computationally infeasible. We circumvent that obstacle by calculating the network class ensemble. We represent the ensemble by a stochastic matrix T, which is a transition-by-transition superposition of the system dynamics for each member of the class. We present concrete results for T derived from boolean time series dynamics on networks obeying the Strong Inhibition rule, by applying T to several traditional questions about network dynamics. We show that the distribution of the number of point attractors can be accurately estimated with T. We show how to generate Derrida plots based on T. We show that T-based Shannon entropy outperforms other methods at selecting experiments to further narrow the network structure. We also outline an experimental test of predictions based on T. We motivate all of these results in terms of a popular molecular biology boolean network model for the yeast cell cycle, but the methods and analyses we introduce are general. We conclude with open questions for T, for example, application to other models, computational considerations when scaling up to larger systems, and other potential analyses.

  14. Advanced thermally stable jet fuels

    Energy Technology Data Exchange (ETDEWEB)

    Schobert, H.H.

    1999-01-31

    The Pennsylvania State University program in advanced thermally stable coal-based jet fuels has five broad objectives: (1) Development of mechanisms of degradation and solids formation; (2) Quantitative measurement of growth of sub-micrometer and micrometer-sized particles suspended in fuels during thermal stressing; (3) Characterization of carbonaceous deposits by various instrumental and microscopic methods; (4) Elucidation of the role of additives in retarding the formation of carbonaceous solids; (5) Assessment of the potential of production of high yields of cycloalkanes by direct liquefaction of coal. Future high-Mach aircraft will place severe thermal demands on jet fuels, requiring the development of novel, hybrid fuel mixtures capable of withstanding temperatures in the range of 400--500 C. In the new aircraft, jet fuel will serve as both an energy source and a heat sink for cooling the airframe, engine, and system components. The ultimate development of such advanced fuels requires a thorough understanding of the thermal decomposition behavior of jet fuels under supercritical conditions. Considering that jet fuels consist of hundreds of compounds, this task must begin with a study of the thermal degradation behavior of select model compounds under supercritical conditions. The research performed by The Pennsylvania State University was focused on five major tasks that reflect the objectives stated above: Task 1: Investigation of the Quantitative Degradation of Fuels; Task 2: Investigation of Incipient Deposition; Task 3: Characterization of Solid Gums, Sediments, and Carbonaceous Deposits; Task 4: Coal-Based Fuel Stabilization Studies; and Task 5: Exploratory Studies on the Direct Conversion of Coal to High Quality Jet Fuels. The major findings of each of these tasks are presented in this executive summary. A description of the sub-tasks performed under each of these tasks and the findings of those studies are provided in the remainder of this volume

  15. Population Games, Stable Games, and Passivity

    Directory of Open Access Journals (Sweden)

    Michael J. Fox

    2013-10-01

    Full Text Available The class of “stable games”, introduced by Hofbauer and Sandholm in 2009, has the attractive property of admitting global convergence to equilibria under many evolutionary dynamics. We show that stable games can be identified as a special case of the feedback-system-theoretic notion of a “passive” dynamical system. Motivated by this observation, we develop a notion of passivity for evolutionary dynamics that complements the definition of the class of stable games. Since interconnections of passive dynamical systems exhibit stable behavior, we can make conclusions about passive evolutionary dynamics coupled with stable games. We show how established evolutionary dynamics qualify as passive dynamical systems. Moreover, we exploit the flexibility of the definition of passive dynamical systems to analyze generalizations of stable games and evolutionary dynamics that include forecasting heuristics as well as certain games with memory.

  16. On Identities in Modern Networks

    Directory of Open Access Journals (Sweden)

    Libor Polcak

    2014-09-01

    Full Text Available Communicating parties inside computer networks use different kind of identifiers. Some of these identifiers are stable, e.g., logins used to access a specific service, some are only temporary, e.g., dynamically assigned IP addresses. This paper tackles several challenges of lawful interception that emerged in modern networks. The main contribution is the graph model that links identities learnt from various sources distributed in a network. The inferred identities result into an interception of more detailed data in conformance with the issued court order. The approach deals with network address translation, short-lived identifiers and simultaneous usage of different identities. The approach was evaluated to be viable during real network testing based on various means to learn identities of users connected to a network.

  17. International research networks in pharmaceuticals

    DEFF Research Database (Denmark)

    Cantner, Uwe; Rake, Bastian

    2014-01-01

    of scientific publications related to pharmaceutical research and applying social network analysis, we find that both the number of countries and their connectivity increase in almost all disease group specific networks. The cores of the networks consist of high income OECD countries and remain rather stable......Knowledge production and scientific research have become increasingly more collaborative and international, particularly in pharmaceuticals. We analyze this tendency in general and tie formation in international research networks on the country level in particular. Based on a unique dataset...... over time. Using network regression techniques to analyze the network dynamics our results indicate that accumulative advantages based on connectedness and multi-connectivity are positively related to changes in the countries' collaboration intensity whereas various indicators on similarity between...

  18. The Formation of a Core Periphery Structure in Heterogeneous Financial Networks

    OpenAIRE

    Marco van der Leij; Daan in 't Veld; Cars Hommes

    2014-01-01

    Recent empirical evidence suggests that financial networks exhibit a core periphery network structure. This paper aims at giving an economic explanation for the emergence of such a structure using network formation theory. Focusing on intermediation benefits, we find that a core periphery network cannot be unilaterally stable when agents are homogeneous. The best-response dynamics converge to a unique unilaterally stable outcome ranging from an empty to denser networks as the costs of linking...

  19. Network cohesion

    OpenAIRE

    Cavalcanti, Tiago Vanderlei; Giannitsarou, Chrysi; Johnson, CR

    2017-01-01

    We define a measure of network cohesion and show how it arises naturally in a broad class of dynamic models of endogenous perpetual growth with network externalities. Via a standard growth model, we show why network cohesion is crucial for conditional convergence and explain that as cohesion increases, convergence is faster. We prove properties of network cohesion and define a network aggregator that preserves network cohesion.

  20. Yeast aminopeptidase I is post-translationally sorted from the cytosol to the vacuole by a mechanism mediated by its bipartite N-terminal extension.

    OpenAIRE

    Seguí-Real, B; Martinez, M; Sandoval, I V

    1995-01-01

    Transport of aminopeptidase I (API) to the vacuole appears to be insensitive to blockage of the secretory pathway. Here we show that the N-terminal extension of the 61 kDa precursor of API (pAPI) is proteolytically processed in two sequential steps. The first step involves proteinase A (PrA) and produces a 55 kDa unstable intermediate (iAPI). The second step involves proteinase B (PrB) and converts iAPI into the 50 kDa stable, mature enzyme (mAPI). Reversion of the cup1 growth phenotype by a ...

  1. Neural Network to Solve Concave Games

    OpenAIRE

    Liu, Zixin; Wang, Nengfa

    2014-01-01

    The issue on neural network method to solve concave games is concerned. Combined with variational inequality, Ky Fan inequality, and projection equation, concave games are transformed into a neural network model. On the basis of the Lyapunov stable theory, some stability results are also given. Finally, two classic games’ simulation results are given to illustrate the theoretical results.

  2. Gas phase thermal diffusion of stable isotopes

    International Nuclear Information System (INIS)

    Eck, C.F.

    1979-01-01

    The separation of stable isotopes at Mound Facility is reviewed from a historical perspective. The historical development of thermal diffusion from a laboratory process to a separation facility that handles all the noble gases is described. In addition, elementary thermal diffusion theory and elementary cascade theory are presented along with a brief review of the uses of stable isotopes

  3. physico-chemical and stable isotopes

    African Journals Online (AJOL)

    This paper details the mineralogical, chemical and stable isotope abundances of calcrete in the Letlhakeng fossil valley. The stable isotope abundances (O and C) of calcretes yielded some values which were tested against the nature of the calcretes – pedogenic or groundwater type. The Kgalagadi (Kalahari) is a vast ...

  4. Modelling stable atmospheric boundary layers over snow

    NARCIS (Netherlands)

    Sterk, H.A.M.

    2015-01-01

    Thesis entitled:

    Modelling Stable Atmospheric Boundary Layers over Snow

    H.A.M. Sterk

    Wageningen, 29th of April, 2015

    Summary

    The emphasis of this thesis is on the understanding and forecasting of the Stable Boundary Layer (SBL) over snow-covered surfaces. SBLs

  5. Modelling stable atmospheric boundary layers over snow

    NARCIS (Netherlands)

    Sterk, H.A.M.

    2015-01-01

    Thesis entitled: Modelling Stable Atmospheric Boundary Layers over Snow H.A.M. Sterk Wageningen, 29th of April, 2015 Summary The emphasis of this thesis is on the understanding and forecasting of the Stable Boundary Layer (SBL) over snow-covered surfaces. SBLs typically form at night and in polar

  6. Stable isotopes and biomarkers in microbial ecology

    NARCIS (Netherlands)

    Boschker, H.T.S.; Middelburg, J.J.

    2002-01-01

    The use of biomarkers in combination with stable isotope analysis is a new approach in microbial ecology and a number of papers on a variety of subjects have appeared. We will first discuss the techniques for analysing stable isotopes in biomarkers, primarily gas chromatography-combustion-isotope

  7. Stable Agrobacterium -mediated transformation of the halophytic ...

    African Journals Online (AJOL)

    Stable Agrobacterium-mediated transformation of the halophytic Leymus chinensis (Trin.) Yan-Lin Sun, Soon-Kwan Hong. Abstract. In this study, an efficient procedure for stable Agrobacterium-mediated transformation of Leymus chinensis (Trin.) was established. Agrobacterium tumefaciens strain EHA105, harboring a ...

  8. Network cosmology.

    Science.gov (United States)

    Krioukov, Dmitri; Kitsak, Maksim; Sinkovits, Robert S; Rideout, David; Meyer, David; Boguñá, Marián

    2012-01-01

    Prediction and control of the dynamics of complex networks is a central problem in network science. Structural and dynamical similarities of different real networks suggest that some universal laws might accurately describe the dynamics of these networks, albeit the nature and common origin of such laws remain elusive. Here we show that the causal network representing the large-scale structure of spacetime in our accelerating universe is a power-law graph with strong clustering, similar to many complex networks such as the Internet, social, or biological networks. We prove that this structural similarity is a consequence of the asymptotic equivalence between the large-scale growth dynamics of complex networks and causal networks. This equivalence suggests that unexpectedly similar laws govern the dynamics of complex networks and spacetime in the universe, with implications to network science and cosmology.

  9. Structure of acid-stable carmine.

    Science.gov (United States)

    Sugimoto, Naoki; Kawasaki, Yoko; Sato, Kyoko; Aoki, Hiromitsu; Ichi, Takahito; Koda, Takatoshi; Yamazaki, Takeshi; Maitani, Tamio

    2002-02-01

    Acid-stable carmine has recently been distributed in the U.S. market because of its good acid stability, but it is not permitted in Japan. We analyzed and determined the structure of the major pigment in acid-stable carmine, in order to establish an analytical method for it. Carminic acid was transformed into a different type of pigment, named acid-stable carmine, through amination when heated in ammonia solution. The features of the structure were clarified using a model compound, purpurin, in which the orientation of hydroxyl groups on the A ring of the anthraquinone skeleton is the same as that of carminic acid. By spectroscopic means and the synthesis of acid-stable carmine and purpurin derivatives, the structure of the major pigment in acid-stable carmine was established as 4-aminocarminic acid, a novel compound.

  10. Stable Fly, (L., Dispersal and Governing Factors

    Directory of Open Access Journals (Sweden)

    Allan T. Showler

    2015-01-01

    Full Text Available Although the movement of stable fly, Stomoxys calcitrans (L., has been studied, its extent and significance has been uncertain. On a local scale (13 km is mainly wind-driven by weather fronts that carry stable flies from inland farm areas for up to 225 km to beaches of northwestern Florida and Lake Superior. Stable flies can reproduce for a short time each year in washed-up sea grass, but the beaches are not conducive to establishment. Such movement is passive and does not appear to be advantageous to stable fly's survival. On a regional scale, stable flies exhibit little genetic differentiation, and on the global scale, while there might be more than one “lineage”, the species is nevertheless considered to be panmictic. Population expansion across much of the globe likely occurred from the late Pleistocene to the early Holocene in association with the spread of domesticated nomad livestock and particularly with more sedentary, penned livestock.

  11. What's Next in Complex Networks? Capturing the Concept of Attacking Play in Invasive Team Sports.

    Science.gov (United States)

    Ramos, João; Lopes, Rui J; Araújo, Duarte

    2018-01-01

    The evolution of performance analysis within sports sciences is tied to technology development and practitioner demands. However, how individual and collective patterns self-organize and interact in invasive team sports remains elusive. Social network analysis has been recently proposed to resolve some aspects of this problem, and has proven successful in capturing collective features resulting from the interactions between team members as well as a powerful communication tool. Despite these advances, some fundamental team sports concepts such as an attacking play have not been properly captured by the more common applications of social network analysis to team sports performance. In this article, we propose a novel approach to team sports performance centered on sport concepts, namely that of an attacking play. Network theory and tools including temporal and bipartite or multilayered networks were used to capture this concept. We put forward eight questions directly related to team performance to discuss how common pitfalls in the use of network tools for capturing sports concepts can be avoided. Some answers are advanced in an attempt to be more precise in the description of team dynamics and to uncover other metrics directly applied to sport concepts, such as the structure and dynamics of attacking plays. Finally, we propose that, at this stage of knowledge, it may be advantageous to build up from fundamental sport concepts toward complex network theory and tools, and not the other way around.

  12. Stable isotope-resolved metabolomics and applications for drug development

    Science.gov (United States)

    Fan, Teresa W-M.; Lorkiewicz, Pawel; Sellers, Katherine; Moseley, Hunter N.B.; Higashi, Richard M.; Lane, Andrew N.

    2012-01-01

    Advances in analytical methodologies, principally nuclear magnetic resonance spectroscopy (NMR) and mass spectrometry (MS), during the last decade have made large-scale analysis of the human metabolome a reality. This is leading to the reawakening of the importance of metabolism in human diseases, particularly cancer. The metabolome is the functional readout of the genome, functional genome, and proteome; it is also an integral partner in molecular regulations for homeostasis. The interrogation of the metabolome, or metabolomics, is now being applied to numerous diseases, largely by metabolite profiling for biomarker discovery, but also in pharmacology and therapeutics. Recent advances in stable isotope tracer-based metabolomic approaches enable unambiguous tracking of individual atoms through compartmentalized metabolic networks directly in human subjects, which promises to decipher the complexity of the human metabolome at an unprecedented pace. This knowledge will revolutionize our understanding of complex human diseases, clinical diagnostics, as well as individualized therapeutics and drug response. In this review, we focus on the use of stable isotope tracers with metabolomics technologies for understanding metabolic network dynamics in both model systems and in clinical applications. Atom-resolved isotope tracing via the two major analytical platforms, NMR and MS, has the power to determine novel metabolic reprogramming in diseases, discover new drug targets, and facilitates ADME studies. We also illustrate new metabolic tracer-based imaging technologies, which enable direct visualization of metabolic processes in vivo. We further outline current practices and future requirements for biochemoinformatics development, which is an integral part of translating stable isotope-resolved metabolomics into clinical reality. PMID:22212615

  13. The network researchers' network

    DEFF Research Database (Denmark)

    Henneberg, Stephan C.; Jiang, Zhizhong; Naudé, Peter

    2009-01-01

    The Industrial Marketing and Purchasing (IMP) Group is a network of academic researchers working in the area of business-to-business marketing. The group meets every year to discuss and exchange ideas, with a conference having been held every year since 1984 (there was no meeting in 1987). In thi...

  14. An order parameter for networks of automata

    International Nuclear Information System (INIS)

    Flyvbjerg, H.

    1988-05-01

    An exact polynomial equation is given for the size of the stable core of networks of automata with random connections. When the connectivity K of a network equals 1, 2, 3, 4, or 5 this equation is exactly solvable. It is found that the size of the stable core is an order parameter for a phase transition well known from Kauffman's model. A new derivation of critical parameter values follows. The phase structure is found to be independent of the updating scheme used in the dynamical law for the network. (orig.)

  15. The testis-specific VAD1.3/AEP1 interacts with {beta}-actin and syntaxin 1 and directs peri-nuclear/Golgi expression with bipartite nucleus localization (BNL) sequence

    Energy Technology Data Exchange (ETDEWEB)

    Zuo, Yan; Gao, Jing [Department of Obstetrics and Gynaecology, The University of Hong Kong, Pokfulam (Hong Kong); Yeung, William S.B. [Department of Obstetrics and Gynaecology, The University of Hong Kong, Pokfulam (Hong Kong); Centre for Reproduction, Development and Growth, Hong Kong Jockey Club Clinical Research Centre, Li Ka Shing Faculty of Medicine, The University of Hong Kong, Pokfulam (Hong Kong); Lee, Kai-Fai, E-mail: ckflee@hkucc.hku.hk [Department of Obstetrics and Gynaecology, The University of Hong Kong, Pokfulam (Hong Kong); Centre for Reproduction, Development and Growth, Hong Kong Jockey Club Clinical Research Centre, Li Ka Shing Faculty of Medicine, The University of Hong Kong, Pokfulam (Hong Kong)

    2010-10-15

    Research highlights: {yields} VAD1.3 interacts {beta}-actin and syntaxin 1. {yields} VAD1.3 colocalizes {beta}-actin in spermatids. {yields} The bipartite nucleus localization (BNL) signal is important for peri-nuclear/Golgi expression in transfected cells. {yields} The C-terminal region of VAD1.3 direct nuclei localization. -- Abstract: VAD1.3 (AEP1), a novel testis-specific gene, was first isolated from the testis of a retinol-treated vitamin-A-deficient (VAD) rat model. It is expressed at the acrosomal region of spermatids from postnatal day 25. VAD1.3 immunoreactivity is present in rat, human, monkey and porcine spermatids and spermatozoa, suggesting that VAD1.3 may play a role in acrosome formation. However, direct evidence on the detailed sub-cellular localization of the VAD1.3 protein in the acrosome and how VAD1.3 is involved in acrosome formation remains largely unknown. Here, we isolated and identified VAD1.3 interacting proteins by immunoprecipitation followed by mass spectrometry, and determined the functional motifs of VAD1.3 that were important for its specific sub-cellular location in vitro. We found that VAD1.3 bound to syntaxin 1 and {beta}-actin proteins in vitro. Immunogold electron microscopic study localized VAD1.3 immunoreactivity to the acrosome membranes and matrix, and colocalized it with the {beta}-actin protein. The full-length GFP-VAD (1-3601) and GFP-VAD (1-730) fusion proteins that contain the bipartite nucleus localization (BNL) signal were located in the peri-nucleus/Golgi of the transfected cells. In addition, the GFP signal colocalized with the endoplasmic reticulum marker and the syntaxin 1 protein in the transfected HeLa and GC-2spd cells. The C-terminal GFP-VAD (1770-3601) was expressed in the nucleus. Taken together, VAD1.3 interacts with {beta}-actin and syntaxin 1 in vitro. The BNL signal may mediate the peri-nuclei localization of the protein that may interact with syntaxin 1 and {beta}-actin for acrosome formation in

  16. Memory pattern analysis of cellular neural networks

    International Nuclear Information System (INIS)

    Zeng Zhigang; Huang Deshuang; Wang Zengfu

    2005-01-01

    In this Letter, we have shown that the n-dimensional cellular neural network and delay cellular neural network can have not more than 3 n memory patterns, can have 2 n memory patterns which are locally exponentially stable. And we have obtained the estimates of attractive domain of such 2 n locally exponentially stable memory patterns. In addition, we have derived the conditions that the equilibrium point is locally exponentially stable when the equilibrium point locate the designated position. Some sufficient conditions have been obtained to guarantee the global exponential stability for the cellular neural networks. Those conditions can be directly derived from the parameters of the neural networks, are very easy to verified. The results presented in this Letter are the improvement and extension of the existed ones. Finally, the validity and performance of the results are illustrated by two simulation results

  17. Untangling above- and belowground mycorrhizal fungal networks in tropical orchids.

    Science.gov (United States)

    Leake, J R; Cameron, D D

    2012-10-01

    Orchids typically depend on fungi for establishment from seeds, forming mycorrhizal associations with basidiomycete fungal partners in the polyphyletic group rhizoctonia from early stages of germination, sometimes with very high specificity. This has raised important questions about the roles of plant and fungal phylogenetics, and their habitat preferences, in controlling which fungi associate with which plants. In this issue of Molecular Ecology, Martos et al. (2012) report the largest network analysis to date for orchids and their mycorrhizal fungi, sampling a total of over 450 plants from nearly half the 150 tropical orchid species on Reunion Island, encompassing its main terrestrial and epiphytic orchid genera. The authors found a total of 95 operational taxonomic units of mycorrhizal fungi and investigated the architecture and nestedness of their bipartite networks with 73 orchid species. The most striking finding was a major ecological barrier between above- and belowground mycorrhizal fungal networks, despite both epiphytic and terrestrial orchids often associating with closely related taxa across all three major lineages of rhizoctonia fungi. The fungal partnerships of the epiphytes and terrestrial species involved a diversity of fungal taxa in a modular network architecture, with only about one in ten mycorrhizal fungi partnering orchids in both groups. In contrast, plant and fungal phylogenetics had weak or no effects on the network. This highlights the power of recently developed ecological network analyses to give new insights into controls on plant-fungal symbioses and raises exciting new hypotheses about the differences in properties and functioning of mycorrhiza in epiphytic and terrestrial orchids. © 2012 Blackwell Publishing Ltd.

  18. Telecommunication networks

    CERN Document Server

    Iannone, Eugenio

    2011-01-01

    Many argue that telecommunications network infrastructure is the most impressive and important technology ever developed. Analyzing the telecom market's constantly evolving trends, research directions, infrastructure, and vital needs, Telecommunication Networks responds with revolutionized engineering strategies to optimize network construction. Omnipresent in society, telecom networks integrate a wide range of technologies. These include quantum field theory for the study of optical amplifiers, software architectures for network control, abstract algebra required to design error correction co

  19. Stable Organic Neutral Diradical via Reversible Coordination.

    Science.gov (United States)

    Lu, Zhenpin; Quanz, Henrik; Burghaus, Olaf; Hofmann, Jonas; Logemann, Christian; Beeck, Sebastian; Schreiner, Peter R; Wegner, Hermann A

    2017-12-27

    We report the formation of a stable neutral diboron diradical simply by coordination of an aromatic dinitrogen compound to an ortho-phenyldiborane. This process is reversible upon addition of pyridine. The diradical species is stable above 200 °C. Computations are consistent with an open-shell triplet diradical with a very small open-shell singlet-triplet energy gap that is indicative of the electronic disjointness of the two radical sites. This opens a new way of generating stable radicals with fascinating electronic properties useful for a large variety of applications.

  20. Stable Isotope Group 1983 progress report

    International Nuclear Information System (INIS)

    Stewart, M.K.

    1984-06-01

    The work of the Stable Isotope Group of the Institute of Nuclear Sciences in the fields of isotope geology, isotope hydrology, geochronology, isotope biology and related fields, and mass spectrometer instrumentation, during 1983, is described

  1. Stable Isotope Group 1982 progress report

    International Nuclear Information System (INIS)

    Stewart, M.K.

    1983-06-01

    The work of the Stable Isotope Group of the Institute of Nuclear Sciences during 1982, in the fields of isotope geology, isotope hydrology, geochronology, isotope biology and mass spectrometer instrumentation, is described

  2. Bartolome Island, Galapagos Stable Oxygen Calibration Data

    Data.gov (United States)

    National Oceanic and Atmospheric Administration, Department of Commerce — Galapagos Coral Stable Oxygen Calibration Data. Sites: Bartolome Island: 0 deg, 17'S, 90 deg 33' W. Champion Island: 1 deg, 15'S, 90 deg, 05' W. Urvina Bay (Isabela...

  3. Allan Hills Stable Water Isotopes, Version 1

    Data.gov (United States)

    National Aeronautics and Space Administration — This data set includes stable water isotope values at 10 m resolution along an approximately 5 km transect through the main icefield of the Allan Hills Blue Ice...

  4. Applications of stable isotopes in clinical pharmacology

    Science.gov (United States)

    Schellekens, Reinout C A; Stellaard, Frans; Woerdenbag, Herman J; Frijlink, Henderik W; Kosterink, Jos G W

    2011-01-01

    This review aims to present an overview of the application of stable isotope technology in clinical pharmacology. Three main categories of stable isotope technology can be distinguished in clinical pharmacology. Firstly, it is applied in the assessment of drug pharmacology to determine the pharmacokinetic profile or mode of action of a drug substance. Secondly, stable isotopes may be used for the assessment of drug products or drug delivery systems by determination of parameters such as the bioavailability or the release profile. Thirdly, patients may be assessed in relation to patient-specific drug treatment; this concept is often called personalized medicine. In this article, the application of stable isotope technology in the aforementioned three areas is reviewed, with emphasis on developments over the past 25 years. The applications are illustrated with examples from clinical studies in humans. PMID:21801197

  5. Tannaka duality and stable infinity-categories

    OpenAIRE

    Iwanari, Isamu

    2014-01-01

    We introduce the notion of fine tannakian infinity-categories and prove Tannaka duality results for symmetric monoidal stable infinity-categories over a field of characteristic zero. We also discuss several examples.

  6. On Stable Marriages and Greedy Matchings

    Energy Technology Data Exchange (ETDEWEB)

    Manne, Fredrik; Naim, Md; Lerring, Hakon; Halappanavar, Mahantesh

    2016-12-11

    Research on stable marriage problems has a long and mathematically rigorous history, while that of exploiting greedy matchings in combinatorial scientific computing is a younger and less developed research field. In this paper we consider the relationships between these two areas. In particular we show that several problems related to computing greedy matchings can be formulated as stable marriage problems and as a consequence several recently proposed algorithms for computing greedy matchings are in fact special cases of well known algorithms for the stable marriage problem. However, in terms of implementations and practical scalable solutions on modern hardware, the greedy matching community has made considerable progress. We show that due to the strong relationship between these two fields many of these results are also applicable for solving stable marriage problems.

  7. A comparison of Agrobacterium-mediated transformation and protoplast-mediated transformation with CRISPR-Cas9 and bipartite gene targeting substrates, as effective gene targeting tools for Aspergillus carbonarius.

    Science.gov (United States)

    Weyda, István; Yang, Lei; Vang, Jesper; Ahring, Birgitte K; Lübeck, Mette; Lübeck, Peter S

    2017-04-01

    In recent years, versatile genetic tools have been developed and applied to a number of filamentous fungi of industrial importance. However, the existing techniques have limitations when it comes to achieve the desired genetic modifications, especially for efficient gene targeting. In this study, we used Aspergillus carbonarius as a host strain due to its potential as a cell factory, and compared three gene targeting techniques by disrupting the ayg1 gene involved in the biosynthesis of conidial pigment in A. carbonarius. The absence of the ayg1 gene leads to phenotypic change in conidia color, which facilitated the analysis on the gene targeting frequency. The examined transformation techniques included Agrobacterium-mediated transformation (AMT) and protoplast-mediated transformation (PMT). Furthermore, the PMT for the disruption of the ayg1 gene was carried out with bipartite gene targeting fragments and the recently adapted CRISPR-Cas9 system. All three techniques were successful in generating Δayg1 mutants, but showed different efficiencies. The most efficient method for gene targeting was AMT, but further it was shown to be dependent on the choice of Agrobacterium strain. However, there are different advantages and disadvantages of all three gene targeting methods which are discussed, in order to facilitate future approaches for fungal strain improvements. Copyright © 2017 Elsevier B.V. All rights reserved.

  8. Interconnected networks

    CERN Document Server

    2016-01-01

    This volume provides an introduction to and overview of the emerging field of interconnected networks which include multi layer or multiplex networks, as well as networks of networks. Such networks present structural and dynamical features quite different from those observed in isolated networks. The presence of links between different networks or layers of a network typically alters the way such interconnected networks behave – understanding the role of interconnecting links is therefore a crucial step towards a more accurate description of real-world systems. While examples of such dissimilar properties are becoming more abundant – for example regarding diffusion, robustness and competition – the root of such differences remains to be elucidated. Each chapter in this topical collection is self-contained and can be read on its own, thus making it also suitable as reference for experienced researchers wishing to focus on a particular topic.

  9. The Reactivity of Stable Metallacyclobutenes and Vinylcarbenes

    OpenAIRE

    Holland, Ryan Lynn

    2016-01-01

    Chapter 1. Historical Development of Stable Metallacyclobutenes Fred Tebbe and co-workers synthesized the first stable metallacyclobutene complexes in the late 1970’s by treatment of an intermediate titanium methylene species – later popularized as the “Tebbe reagent” – with acetylenes. Robert Grubbs at Caltech further studied this system, using it to detail a degenerate metathesis reaction and to isolate a metallacyclobutane complex – which was implicated in the emerging field of alkene meta...

  10. Stable atomic hydrogen: Polarized atomic beam source

    International Nuclear Information System (INIS)

    Niinikoski, T.O.; Penttilae, S.; Rieubland, J.M.; Rijllart, A.

    1984-01-01

    We have carried out experiments with stable atomic hydrogen with a view to possible applications in polarized targets or polarized atomic beam sources. Recent results from the stabilization apparatus are described. The first stable atomic hydrogen beam source based on the microwave extraction method (which is being tested ) is presented. The effect of the stabilized hydrogen gas density on the properties of the source is discussed. (orig.)

  11. General asymmetric neutral networks and structure design by genetic algorithms: A learning rule for temporal patterns

    Energy Technology Data Exchange (ETDEWEB)

    Bornholdt, S. [Heidelberg Univ., (Germany). Inst., fuer Theoretische Physik; Graudenz, D. [Lawrence Berkeley Lab., CA (United States)

    1993-07-01

    A learning algorithm based on genetic algorithms for asymmetric neural networks with an arbitrary structure is presented. It is suited for the learning of temporal patterns and leads to stable neural networks with feedback.

  12. General asymmetric neutral networks and structure design by genetic algorithms: A learning rule for temporal patterns

    International Nuclear Information System (INIS)

    Bornholdt, S.

    1993-07-01

    A learning algorithm based on genetic algorithms for asymmetric neural networks with an arbitrary structure is presented. It is suited for the learning of temporal patterns and leads to stable neural networks with feedback

  13. Prediction of drug-target interaction networks from the integration of chemical and genomic spaces.

    Science.gov (United States)

    Yamanishi, Yoshihiro; Araki, Michihiro; Gutteridge, Alex; Honda, Wataru; Kanehisa, Minoru

    2008-07-01

    The identification of interactions between drugs and target proteins is a key area in genomic drug discovery. Therefore, there is a strong incentive to develop new methods capable of detecting these potential drug-target interactions efficiently. In this article, we characterize four classes of drug-target interaction networks in humans involving enzymes, ion channels, G-protein-coupled receptors (GPCRs) and nuclear receptors, and reveal significant correlations between drug structure similarity, target sequence similarity and the drug-target interaction network topology. We then develop new statistical methods to predict unknown drug-target interaction networks from chemical structure and genomic sequence information simultaneously on a large scale. The originality of the proposed method lies in the formalization of the drug-target interaction inference as a supervised learning problem for a bipartite graph, the lack of need for 3D structure information of the target proteins, and in the integration of chemical and genomic spaces into a unified space that we call 'pharmacological space'. In the results, we demonstrate the usefulness of our proposed method for the prediction of the four classes of drug-target interaction networks. Our comprehensively predicted drug-target interaction networks enable us to suggest many potential drug-target interactions and to increase research productivity toward genomic drug discovery. Softwares are available upon request. Datasets and all prediction results are available at http://web.kuicr.kyoto-u.ac.jp/supp/yoshi/drugtarget/.

  14. Community Structure of a Bank-Firm Credit Network in Japan

    Science.gov (United States)

    Iyetomi, Hiroshi; Matsuura, Yuki

    2014-03-01

    We study temporal change of community structure in a Japanese credit network formed by banks and listed firms through their financial relations over the last 30 years. The credit connectedness is regarded as a potenital source of systemic risk. Our network is a bipartite graph consisting of two species of nodes connected with bidirectional links. The direction of links is identified with that of risk flows and their weights are relative credit/loan with respect to the targets. In a partial credit network obtained only with the links pointing from firms toward banks, the city banks forms one major community in most of the time period to share risk when firms go wrong. On the other hand, a partial network only with the links from banks toward firms is decomposed into communities of similar size each of which has its own city bank, reflecting the main-bank system in Japan. Finally we take overlapping parts of the two community sets to find cores of the risk concentration in the credit network. This work was supported by JSPS KAKENHI Grant Number 22300080.

  15. Expected Transmission Energy Route Metric for Wireless Mesh Senor Networks

    Directory of Open Access Journals (Sweden)

    YanLiang Jin

    2011-01-01

    Full Text Available Mesh is a network topology that achieves high throughput and stable intercommunication. With great potential, it is expected to be the key architecture of future networks. Wireless sensor networks are an active research area with numerous workshops and conferences arranged each year. The overall performance of a WSN highly depends on the energy consumption of the network. This paper designs a new routing metric for wireless mesh sensor networks. Results from simulation experiments reveal that the new metric algorithm improves the energy balance of the whole network and extends the lifetime of wireless mesh sensor networks (WMSNs.

  16. Network maintenance

    CERN Multimedia

    GS Department

    2009-01-01

    A site-wide network maintenance operation has been scheduled for Saturday 28 February. Most of the network devices of the general purpose network will be upgraded to a newer software version, in order to improve our network monitoring capabilities. This will result in a series of short (2-5 minutes) random interruptions everywhere on the CERN sites throughout the day. This upgrade will not affect the Computer Centre itself, Building 613, the Technical Network and the LHC experiments, dedicated networks at the pits. For further details of this intervention, please contact Netops by phone 74927 or e-mail mailto:Netops@cern.ch. IT/CS Group

  17. Network maintenance

    CERN Multimedia

    IT Department

    2009-01-01

    A site wide network maintenance has been scheduled for Saturday 28 February. Most of the network devices of the General Purpose network will be upgraded to a newer software version, in order to improve our network monitoring capabilities. This will result in a series of short (2-5 minutes) random interruptions everywhere on the CERN sites along this day. This upgrade will not affect: the Computer centre itself, building 613, the Technical Network and the LHC experiments dedicated networks at the pits. Should you need more details on this intervention, please contact Netops by phone 74927 or email mailto:Netops@cern.ch. IT/CS Group

  18. Community structure of non-coding RNA interaction network

    Directory of Open Access Journals (Sweden)

    Nacher Jose C.

    2013-06-01

    Full Text Available Rapid technological advances have shown that the ratio of non-protein coding genes rises to 98.5% in humans, suggesting that current knowledge on genetic information processing might be largely incomplete. It implies that protein-coding sequences only represent a small fraction of cellular transcriptional information. Here, we examine the community structure of the network defined by functional interactions between noncoding RNAs (ncRNAs and proteins related bio-macrolecules (PRMs using a two-fold approach: modularity in bipartite network and k-clique community detection. First, the high modularity scores as well as the distribution of community sizes showing a scaling-law revealed manifestly non-random features. Second, the k-clique sub-graphs and overlaps show that the identified communities of the ncRNA molecules of H. sapiens can potentially be associated with certain functions. These findings highlight the complex modular structure of ncRNA interactions and its possible regulatory roles in the cell.

  19. Network Ambivalence

    Directory of Open Access Journals (Sweden)

    Patrick Jagoda

    2015-08-01

    Full Text Available The language of networks now describes everything from the Internet to the economy to terrorist organizations. In distinction to a common view of networks as a universal, originary, or necessary form that promises to explain everything from neural structures to online traffic, this essay emphasizes the contingency of the network imaginary. Network form, in its role as our current cultural dominant, makes scarcely imaginable the possibility of an alternative or an outside uninflected by networks. If so many things and relationships are figured as networks, however, then what is not a network? If a network points towards particular logics and qualities of relation in our historical present, what others might we envision in the future? In  many ways, these questions are unanswerable from within the contemporary moment. Instead of seeking an avant-garde approach (to move beyond networks or opting out of networks (in some cases, to recover elements of pre-networked existence, this essay proposes a third orientation: one of ambivalence that operates as a mode of extreme presence. I propose the concept of "network aesthetics," which can be tracked across artistic media and cultural forms, as a model, style, and pedagogy for approaching interconnection in the twenty-first century. The following essay is excerpted from Network Ambivalence (Forthcoming from University of Chicago Press. 

  20. Local Search Approaches in Stable Matching Problems

    Directory of Open Access Journals (Sweden)

    Toby Walsh

    2013-10-01

    Full Text Available The stable marriage (SM problem has a wide variety of practical applications, ranging from matching resident doctors to hospitals, to matching students to schools or, more generally, to any two-sided market. In the classical formulation, n men and n women express their preferences (via a strict total order over the members of the other sex. Solving an SM problem means finding a stable marriage where stability is an envy-free notion: no man and woman who are not married to each other would both prefer each other to their partners or to being single. We consider both the classical stable marriage problem and one of its useful variations (denoted SMTI (Stable Marriage with Ties and Incomplete lists where the men and women express their preferences in the form of an incomplete preference list with ties over a subset of the members of the other sex. Matchings are permitted only with people who appear in these preference lists, and we try to find a stable matching that marries as many people as possible. Whilst the SM problem is polynomial to solve, the SMTI problem is NP-hard. We propose to tackle both problems via a local search approach, which exploits properties of the problems to reduce the size of the neighborhood and to make local moves efficiently. We empirically evaluate our algorithm for SM problems by measuring its runtime behavior and its ability to sample the lattice of all possible stable marriages. We evaluate our algorithm for SMTI problems in terms of both its runtime behavior and its ability to find a maximum cardinality stable marriage. Experimental results suggest that for SM problems, the number of steps of our algorithm grows only as O(n log(n, and that it samples very well the set of all stable marriages. It is thus a fair and efficient approach to generate stable marriages. Furthermore, our approach for SMTI problems is able to solve large problems, quickly returning stable matchings of large and often optimal size, despite the

  1. Network neuroscience.

    Science.gov (United States)

    Bassett, Danielle S; Sporns, Olaf

    2017-02-23

    Despite substantial recent progress, our understanding of the principles and mechanisms underlying complex brain function and cognition remains incomplete. Network neuroscience proposes to tackle these enduring challenges. Approaching brain structure and function from an explicitly integrative perspective, network neuroscience pursues new ways to map, record, analyze and model the elements and interactions of neurobiological systems. Two parallel trends drive the approach: the availability of new empirical tools to create comprehensive maps and record dynamic patterns among molecules, neurons, brain areas and social systems; and the theoretical framework and computational tools of modern network science. The convergence of empirical and computational advances opens new frontiers of scientific inquiry, including network dynamics, manipulation and control of brain networks, and integration of network processes across spatiotemporal domains. We review emerging trends in network neuroscience and attempt to chart a path toward a better understanding of the brain as a multiscale networked system.

  2. Network Science

    National Research Council Canada - National Science Library

    Leland, Will

    2006-01-01

    OVERVIEW: (1) A committee of technical experts, military officers and R&D managers was assembled by the National Research Council to reach consensus on the nature of networks and network research. (2...

  3. Software-defined network abstractions and configuration interfaces for building programmable quantum networks

    Energy Technology Data Exchange (ETDEWEB)

    Dasari, Venkat [U.S. Army Research Laboratory, Aberdeen Proving Ground, MD; Sadlier, Ronald J [ORNL; Geerhart, Mr. Billy [U.S. Army Research Laboratory, Aberdeen Proving Ground, MD; Snow, Nikolai [U.S. Army Research Laboratory, Aberdeen Proving Ground, MD; Williams, Brian P [ORNL; Humble, Travis S [ORNL

    2017-01-01

    Well-defined and stable quantum networks are essential to realize functional quantum applications. Quantum networks are complex and must use both quantum and classical channels to support quantum applications like QKD, teleportation, and superdense coding. In particular, the no-cloning theorem prevents the reliable copying of quantum signals such that the quantum and classical channels must be highly coordinated using robust and extensible methods. We develop new network abstractions and interfaces for building programmable quantum networks. Our approach leverages new OpenFlow data structures and table type patterns to build programmable quantum networks and to support quantum applications.

  4. Alliance networks

    OpenAIRE

    Sroka, Władzimierz

    2015-01-01

    The article deals with the problems of cooperation in network organizations. The structure of the text is divided into a couple of parts. Firstly, the increasing importance of alliance networks is described. Secondly, the concept of alliance networks as well as the essence of multinational corporations are presented. Beside theoretical deliberations, two practical cases are presented in the text too. First case relates to the Toyota keiretsu and the second one describes the network organizati...

  5. Network Simulation

    CERN Document Server

    Fujimoto, Richard

    2006-01-01

    "Network Simulation" presents a detailed introduction to the design, implementation, and use of network simulation tools. Discussion topics include the requirements and issues faced for simulator design and use in wired networks, wireless networks, distributed simulation environments, and fluid model abstractions. Several existing simulations are given as examples, with details regarding design decisions and why those decisions were made. Issues regarding performance and scalability are discussed in detail, describing how one can utilize distributed simulation methods to increase the

  6. Functional dissection of the bipartite active site of the class I coenzyme A (CoA)-transferase succinyl-CoA:acetate CoA-transferase

    Science.gov (United States)

    Murphy, Jesse; Mullins, Elwood; Kappock, T.

    2016-05-01

    Coenzyme A (CoA)-transferases catalyze the reversible transfer of CoA from acyl-CoA thioesters to free carboxylates. Class I CoA-transferases produce acylglutamyl anhydride intermediates that undergo attack by CoA thiolate on either the internal or external carbonyl carbon atoms, forming distinct tetrahedral intermediates less than 3 Å apart. In this study, crystal structures of succinyl-CoA:acetate CoA-transferase (AarC) from Acetobacter aceti are used to examine how the Asn347 carboxamide stabilizes the internal oxyanion intermediate. A structure of the active mutant AarC-N347A bound to CoA revealed both solvent replacement of the missing contact and displacement of the adjacent Glu294, indicating that Asn347 both polarizes and orients the essential glutamate. AarC was crystallized with the nonhydrolyzable acetyl-CoA (AcCoA) analogue dethiaacetyl-CoA (1a) in an attempt to trap a closed enzyme complex containing a stable analogue of the external oxyanion intermediate. One active site contained an acetylglutamyl anhydride adduct and truncated 1a, an unexpected result hinting at an unprecedented cleavage of the ketone moiety in 1a. Solution studies confirmed that 1a decomposition is accompanied by production of near-stoichiometric acetate, in a process that seems to depend on microbial contamination but not AarC. A crystal structure of AarC bound to the postulated 1a truncation product (2a) showed complete closure of one active site per dimer but no acetylglutamyl anhydride, even with acetate added. These findings suggest that an activated acetyl donor forms during 1a decomposition; a working hypothesis involving ketone oxidation is offered. The ability of 2a to induce full active site closure furthermore suggests that it subverts a system used to impede inappropriate active site closure on unacylated CoA.

  7. Functional dissection of the bipartite active site of the class I coenzyme A (CoA-transferase succinyl-CoA:acetate CoA-transferase

    Directory of Open Access Journals (Sweden)

    Jesse Ray Murphy

    2016-05-01

    Full Text Available Coenzyme A (CoA-transferases catalyze the reversible transfer of CoA from acyl-CoA thioesters to free carboxylates. Class I CoA-transferases produce acylglutamyl anhydride intermediates that undergo attack by CoA thiolate on either the internal or external carbonyl carbon atoms, forming distinct tetrahedral intermediates less than 3 Å apart. In this study, crystal structures of succinyl-CoA:acetate CoA-transferase (AarC from Acetobacter aceti are used to examine how the Asn347 carboxamide stabilizes the internal oxyanion intermediate. A structure of the active mutant AarC-N347A bound to CoA revealed both solvent replacement of the missing contact and displacement of the adjacent Glu294, indicating that Asn347 both polarizes and orients the essential glutamate. AarC was crystallized with the nonhydrolyzable acetyl-CoA (AcCoA analogue dethiaacetyl-CoA (1a in an attempt to trap a closed enzyme complex containing a stable analogue of the external oxyanion intermediate. One active site contained an acetylglutamyl anhydride adduct and truncated 1a, an unexpected result hinting at an unprecedented cleavage of the ketone moiety in 1a. Solution studies confirmed that 1a decomposition is accompanied by production of near-stoichiometric acetate, in a process that seems to depend on microbial contamination but not AarC. A crystal structure of AarC bound to the postulated 1a truncation product (2a showed complete closure of one active site per dimer but no acetylglutamyl anhydride, even with acetate added. These findings suggest that an activated acetyl donor forms during 1a decomposition; a working hypothesis involving ketone oxidation is offered. The ability of 2a to induce full active site closure furthermore suggests that it subverts a system used to impede inappropriate active site closure on unacylated CoA.

  8. Reference Gene Selection for qPCR Analysis in Tomato-Bipartite Begomovirus Interaction and Validation in Additional Tomato-Virus Pathosystems.

    Directory of Open Access Journals (Sweden)

    Ana L M Lacerda

    Full Text Available Quantitative Polymerase Chain Reaction (qPCR is currently the most sensitive technique used for absolute and relative quantification of a target gene transcript, requiring the use of appropriated reference genes for data normalization. To accurately estimate the relative expression of target tomato (Solanum lycopersicum L. genes responsive to several virus species in reverse transcription qPCR analysis, the identification of reliable reference genes is mandatory. In the present study, ten reference genes were analyzed across a set of eight samples: two tomato contrasting genotypes ('Santa Clara', susceptible, and its near-isogenic line 'LAM 157', resistant; subjected to two treatments (inoculation with Tomato chlorotic mottle virus (ToCMoV and its mock-inoculated control and in two distinct times after inoculation (early and late. Reference genes stability was estimated by three statistical programs (geNorm, NormFinder and BestKeeper. To validate the results over broader experimental conditions, a set of ten samples, corresponding to additional three tomato-virus pathosystems that included tospovirus, crinivirus and tymovirus + tobamovirus, was analyzed together with the tomato-ToCMoV pathosystem dataset, using the same algorithms. Taking into account the combined analyses of the ranking order outputs from the three algorithms, TIP41 and EF1 were identified as the most stable genes for tomato-ToCMoV pathosystem, and TIP41 and EXP for the four pathosystems together, and selected to be used as reference in the forthcoming expression qPCR analysis of target genes in experimental conditions involving the aforementioned tomato-virus pathosystems.

  9. Dopant designing for thermally stable graded index plastic optical fiber

    Science.gov (United States)

    Yamaki, Y.; Kondo, A.; Koike, Y.

    2009-02-01

    The graded index polymer optical fiber (GI POF) has been proposed as a media for very short reach network because of its high flexibility, low laying cost and excellent transmission characteristics. However, the plasticization efficiency which causes by the high refractive dopant decreases the glass transition temperature (Tg) in the center of the core and deteriorates thermal stability of fibers. In this paper, thermally stable PMMA based GI POF was successfully fabricated for the first time by designing dopant molecule which has little plasticizer effect. Tg at the core region was improved to 104 °C while that of conventional GI POF is 86 °C. Stability of attenuation at 85 °C/dry and 75 °C/85 %RH were clarified to be as high as that of non-doped step index POF.

  10. Network Coding

    Indian Academy of Sciences (India)

    message symbols downstream, network coding achieves vast performance gains by permitting intermediate nodes to carry out algebraic oper- ations on the incoming data. In this article we present a tutorial introduction to network coding as well as an application to the e±cient operation of distributed data-storage networks.

  11. Network Coding

    Indian Academy of Sciences (India)

    Network coding is a technique to increase the amount of information °ow in a network by mak- ing the key observation that information °ow is fundamentally different from commodity °ow. Whereas, under traditional methods of opera- tion of data networks, intermediate nodes are restricted to simply forwarding their incoming.

  12. Metabolic studies in man using stable isotopes

    International Nuclear Information System (INIS)

    Faust, H.; Jung, K.; Krumbiegel, P.

    1993-01-01

    In this project, stable isotope compounds and stable isotope pharmaceuticals were used (with emphasis on the application of 15 N) to study several aspects of nitrogen metabolism in man. Of the many methods available, the 15 N stable isotope tracer technique holds a special position because the methodology for application and nitrogen isotope analysis is proven and reliable. Valid routine methods using 15 N analysis by emission spectrometry have been demonstrated. Several methods for the preparation of biological material were developed during our participation in the Coordinated Research Programme. In these studies, direct procedures (i.e. use of diluted urine as a samples without chemical preparation) or rapid isolation methods were favoured. Within the scope of the Analytical Quality Control Service (AQCS) enriched stable isotope reference materials for medical and biological studies were prepared and are now available through the International Atomic Energy Agency. The materials are of special importance as the increasing application of stable isotopes as tracers in medical, biological and agricultural studies has focused interest on reliable measurements of biological material of different origin. 24 refs

  13. Electric Field Generation and Control of Bipartite Quantum Entanglement between Electronic Spins in Mixed Valence Polyoxovanadate [GeV14O40]8.

    Science.gov (United States)

    Palii, Andrew; Aldoshin, Sergey; Tsukerblat, Boris; Borràs-Almenar, Juan José; Clemente-Juan, Juan Modesto; Cardona-Serra, Salvador; Coronado, Eugenio

    2017-08-21

    As part of the search for systems in which control of quantum entanglement can be achieved, here we consider the paramagnetic mixed valence polyoxometalate K 2 Na 6 [GeV 14 O 40 ]·10H 2 O in which two electrons are delocalized over the 14 vanadium ions. Applying a homogeneous electric field can induce an antiferromagnetic coupling between the two delocalized electronic spins that behave independently in the absence of the field. On the basis of the proposed theoretical model, we show that the external field can be used to generate controllable quantum entanglement between the two electronic spins traveling over a vanadium network of mixed valence polyoxoanion [GeV 14 O 40 ] 8- . Within a simplified two-level picture of the energy pattern of the electronic pair based on the previous ab initio analysis, we evaluate the temperature and field dependencies of concurrence and thus indicate that the entanglement can be controlled via the temperature, magnitude, and orientation of the electric field with respect to molecular axes of [GeV 14 O 40 ] 8- .

  14. New Frontiers in Networking with Emphasis on Defense Applications

    Science.gov (United States)

    2016-06-01

    Unlimited. 2 3. METHODS, ASSUMPTIONS, AND PROCEDURES The approach used to identify new techniques was to invite US network experts to participate in...such as 60GHz where the coherence time is so short that the notion of a stable network topology no longer makes sense. One key question to address is...what is the right concept and theory for these networks to replace conventional network quasi-static topology design and routing? c. Due to the

  15. Technical Network

    CERN Multimedia

    2007-01-01

    In order to optimise the management of the Technical Network (TN), to facilitate understanding of the purpose of devices connected to the TN and to improve security incident handling, the Technical Network Administrators and the CNIC WG have asked IT/CS to verify the "description" and "tag" fields of devices connected to the TN. Therefore, persons responsible for systems connected to the TN will receive e-mails from IT/CS asking them to add the corresponding information in the network database at "network-cern-ch". Thank you very much for your cooperation. The Technical Network Administrators & the CNIC WG

  16. Network workshop

    DEFF Research Database (Denmark)

    Bruun, Jesper; Evans, Robert Harry

    2014-01-01

    This paper describes the background for, realisation of and author reflections on a network workshop held at ESERA2013. As a new research area in science education, networks offer a unique opportunity to visualise and find patterns and relationships in complicated social or academic network data...... research community. With this workshop, participants were offered a way into network science based on authentic educational research data. The workshop was constructed as an inquiry lesson with emphasis on user autonomy. Learning activities had participants choose to work with one of two cases of networks...

  17. Splitting Strategy for Simulating Genetic Regulatory Networks

    Directory of Open Access Journals (Sweden)

    Xiong You

    2014-01-01

    Full Text Available The splitting approach is developed for the numerical simulation of genetic regulatory networks with a stable steady-state structure. The numerical results of the simulation of a one-gene network, a two-gene network, and a p53-mdm2 network show that the new splitting methods constructed in this paper are remarkably more effective and more suitable for long-term computation with large steps than the traditional general-purpose Runge-Kutta methods. The new methods have no restriction on the choice of stepsize due to their infinitely large stability regions.

  18. Temperature and Humidity Control in Livestock Stables

    DEFF Research Database (Denmark)

    Hansen, Michael; Andersen, Palle; Nielsen, Kirsten M.

    2010-01-01

    The paper describes temperature and humidity control of a livestock stable. It is important to have a correct air flow pattern in the livestock stable in order to achieve proper temperature and humidity control as well as to avoid draught. In the investigated livestock stable the air flow...... is controlled using wall mounted ventilation flaps. In the paper an algorithm for air flow control is presented meeting the needs for temperature and humidity while taking the air flow pattern in consideration. To obtain simple and realisable controllers a model based control design method is applied....... In the design dynamic models for temperature and humidity are very important elements and effort is put into deriving and testing the models. It turns out that non-linearities are dominating in both models making feedback linearization the natural design method. The air controller as well as the temperature...

  19. On some topological properties of stable measures

    DEFF Research Database (Denmark)

    Nielsen, Carsten Krabbe

    1996-01-01

    Summary The paper shows that the set of stable probability measures and the set of Rational Beliefs relative to a given stationary measure are closed in the strong topology, but not closed in the topology of weak convergence. However, subsets of the set of stable probability measures which...... are characterized by uniformity of convergence of the empirical distribution are closed in the topology of weak convergence. It is demonstrated that such subsets exist. In particular, there is an increasing sequence of sets of SIDS measures who's union is the set of all SIDS measures generated by a particular...... system and such that each subset consists of stable measures. The uniformity requirement has a natural interpretation in terms of plausibility of Rational Beliefs...

  20. Concentration of stable elements in food products

    Energy Technology Data Exchange (ETDEWEB)

    Montford, M.A.; Shank, K.E.; Hendricks, C.; Oakes, T.W.

    1980-01-01

    Food samples were taken from commercial markets and analyzed for stable element content. The concentrations of most stable elements (Ag, Al, As, Au, Ba, Br, Ca, Ce, Cl, Co, Cr, Cs, Cu, Fe, Hf, I, K, La, Mg, Mn, Mo, Na, Rb, Sb, Sc, Se, Sr, Ta, Th, Ti, V, Zn, Zr) were determined using multiple-element neutron activation analysis, while the concentrations of other elements (Cd, Hg, Ni, Pb) were determined using atomic absorption. The relevance of the concentrations found are noted in relation to other literature values. An earlier study was extended to include the determination of the concentration of stable elements in home-grown products in the vicinity of the Oak Ridge National Laboratory. Comparisons between the commercial and local food-stuff values are discussed.

  1. Network science

    CERN Document Server

    Barabasi, Albert-Laszlo

    2016-01-01

    Networks are everywhere, from the Internet, to social networks, and the genetic networks that determine our biological existence. Illustrated throughout in full colour, this pioneering textbook, spanning a wide range of topics from physics to computer science, engineering, economics and the social sciences, introduces network science to an interdisciplinary audience. From the origins of the six degrees of separation to explaining why networks are robust to random failures, the author explores how viruses like Ebola and H1N1 spread, and why it is that our friends have more friends than we do. Using numerous real-world examples, this innovatively designed text includes clear delineation between undergraduate and graduate level material. The mathematical formulas and derivations are included within Advanced Topics sections, enabling use at a range of levels. Extensive online resources, including films and software for network analysis, make this a multifaceted companion for anyone with an interest in network sci...

  2. Vulnerability of network of networks

    Science.gov (United States)

    Havlin, S.; Kenett, D. Y.; Bashan, A.; Gao, J.; Stanley, H. E.

    2014-10-01

    Our dependence on networks - be they infrastructure, economic, social or others - leaves us prone to crises caused by the vulnerabilities of these networks. There is a great need to develop new methods to protect infrastructure networks and prevent cascade of failures (especially in cases of coupled networks). Terrorist attacks on transportation networks have traumatized modern societies. With a single blast, it has become possible to paralyze airline traffic, electric power supply, ground transportation or Internet communication. How, and at which cost can one restructure the network such that it will become more robust against malicious attacks? The gradual increase in attacks on the networks society depends on - Internet, mobile phone, transportation, air travel, banking, etc. - emphasize the need to develop new strategies to protect and defend these crucial networks of communication and infrastructure networks. One example is the threat of liquid explosives a few years ago, which completely shut down air travel for days, and has created extreme changes in regulations. Such threats and dangers warrant the need for new tools and strategies to defend critical infrastructure. In this paper we review recent advances in the theoretical understanding of the vulnerabilities of interdependent networks with and without spatial embedding, attack strategies and their affect on such networks of networks as well as recently developed strategies to optimize and repair failures caused by such attacks.

  3. Faster and Simpler Approximation of Stable Matchings

    Directory of Open Access Journals (Sweden)

    Katarzyna Paluch

    2014-04-01

    Full Text Available We give a 3 2 -approximation algorithm for finding stable matchings that runs in O(m time. The previous most well-known algorithm, by McDermid, has the same approximation ratio but runs in O(n3/2m time, where n denotes the number of people andm is the total length of the preference lists in a given instance. In addition, the algorithm and the analysis are much simpler. We also give the extension of the algorithm for computing stable many-to-many matchings.

  4. Stable isotopes in Lithuanian bioarcheological material

    Science.gov (United States)

    Skipityte, Raminta; Jankauskas, Rimantas; Remeikis, Vidmantas

    2015-04-01

    Investigation of bioarcheological material of ancient human populations allows us to understand the subsistence behavior associated with various adaptations to the environment. Feeding habits are essential to the survival and growth of ancient populations. Stable isotope analysis is accepted tool in paleodiet (Schutkowski et al, 1999) and paleoenvironmental (Zernitskaya et al, 2014) studies. However, stable isotopes can be useful not only in investigating human feeding habits but also in describing social and cultural structure of the past populations (Le Huray and Schutkowski, 2005). Only few stable isotope investigations have been performed before in Lithuanian region suggesting a quite uniform diet between males and females and protein intake from freshwater fish and animal protein. Previously, stable isotope analysis has only been used to study a Stone Age population however, more recently studies have been conducted on Iron Age and Late medieval samples (Jacobs et al, 2009). Anyway, there was a need for more precise examination. Stable isotope analysis were performed on human bone collagen and apatite samples in this study. Data represented various ages (from 5-7th cent. to 18th cent.). Stable carbon and nitrogen isotope analysis on medieval populations indicated that individuals in studied sites in Lithuania were almost exclusively consuming C3 plants, C3 fed terrestrial animals, and some freshwater resources. Current investigation demonstrated social differences between elites and country people and is promising in paleodietary and daily life reconstruction. Acknowledgement I thank prof. dr. G. Grupe, Director of the Anthropological and Palaeoanatomical State Collection in Munich for providing the opportunity to work in her laboratory. The part of this work was funded by DAAD. Antanaitis-Jacobs, Indre, et al. "Diet in early Lithuanian prehistory and the new stable isotope evidence." Archaeologia Baltica 12 (2009): 12-30. Le Huray, Jonathan D., and Holger

  5. Bordism, stable homotopy and adams spectral sequences

    CERN Document Server

    Kochman, Stanley O

    1996-01-01

    This book is a compilation of lecture notes that were prepared for the graduate course "Adams Spectral Sequences and Stable Homotopy Theory" given at The Fields Institute during the fall of 1995. The aim of this volume is to prepare students with a knowledge of elementary algebraic topology to study recent developments in stable homotopy theory, such as the nilpotence and periodicity theorems. Suitable as a text for an intermediate course in algebraic topology, this book provides a direct exposition of the basic concepts of bordism, characteristic classes, Adams spectral sequences, Brown-Peter

  6. Modelling stable water isotopes: Status and perspectives

    Directory of Open Access Journals (Sweden)

    Werner M.

    2010-12-01

    Full Text Available Modelling of stable water isotopes H2 18O and HDO within various parts of the Earth’s hydrological cycle has clearly improved our understanding of the interplay between climatic variations and related isotope fractionation processes. In this article key principles and major research results of stable water isotope modelling studies are described. Emphasis is put on research work using explicit isotope diagnostics within general circulation models as this highly complex model setup bears many resemblances with studies using simpler isotope modelling approaches.

  7. The Situation Awareness Weighted Network (SAWN) model and method: Theory and application.

    Science.gov (United States)

    Kalloniatis, Alexander; Ali, Irena; Neville, Timothy; La, Phuong; Macleod, Iain; Zuparic, Mathew; Kohn, Elizabeth

    2017-05-01

    We introduce a novel model and associated data collection method to examine how a distributed organisation of military staff who feed a Common Operating Picture (COP) generates Situation Awareness (SA), a critical component in organisational performance. The proposed empirically derived Situation Awareness Weighted Network (SAWN) model draws on two scientific models of SA, by Endsley involving perception, comprehension and projection, and by Stanton et al. positing that SA exists across a social and semantic network of people and information objects in activities connected across a set of tasks. The output of SAWN is a representation as a weighted semi-bipartite network of the interaction between people ('human nodes') and information artefacts such as documents and system displays ('product nodes'); link weights represent the Endsley levels of SA that individuals acquire from or provide to information objects and other individuals. The SAWN method is illustrated with aggregated empirical data from a case study of Australian military staff undertaking their work during two very different scenarios, during steady-state operations and in a crisis threat context. A key outcome of analysis of the weighted networks is that we are able to quantify flow of SA through an organisation as staff seek to "value-add" in the conduct of their work. Crown Copyright © 2017. Published by Elsevier Ltd. All rights reserved.

  8. Obstáculos políticos à regionalização do SUS: percepções dos secretários municipais de Saúde com assento nas Comissões Intergestores Bipartites

    Directory of Open Access Journals (Sweden)

    Marcelo Rasga Moreira

    Full Text Available Resumo O artigo tem como objetivo identificar e analisar os obstáculos políticos à implementação do Contrato Organizativo da Ação Pública (COAP a partir das percepções dos secretários municipais de saúde das Comissões Intergestores Bipartites (CIB. Para isso, foram entrevistados, de outubro de 2015 a agosto de 2016, 195 secretários (92% do total. A partir da abordagem da ‘análise de políticas’, os principais obstáculos identificados foram, em síntese: um obstáculo tradicional (a falta de recursos, um que vem ganhando força nos últimos anos (a judicialização da política e outro, talvez inédito: o sistema político-partidário e o Poder Executivo Estadual são os grandes ausentes nas coalizões de apoio às políticas de regionalização do Sistema Único de Saúde (SUS. Conclui-se que tais obstáculos indicam um cenário extremamente negativo para a implementação do COAP e de outras políticas que busquem a regionalização do SUS. Diante disto, cabe aos envolvidos refletir, negociar, construir consenso em torno da melhoria da saúde da população e superar tais obstáculos caso, logicamente, desposem da concepção dos autores de que a regionalização é fundamental para o SUS.

  9. A stable isotope approach for the quantification of sewer infiltration.

    Science.gov (United States)

    Kracht, Oliver; Gresch, Markus; Gujert, Willi

    2007-08-15

    Extraneous flows in wastewater collection systems are conventionally evaluated solely on the consideration of discharge hydrographs, which often involves a great degree of subjectivity and oversimplification. To obtain reliable information on the material fluxes within the urban environment, the use of intrinsic tracers can be the optimal choice. We demonstrate the successful use of naturally occurring stable isotopes of water (18O/16O and D/H) to accurately quantify extraneous discharge of groundwater in a combined sewer network. Fresh water supply from a distant hydrological regime provided usable isotopic separations between drinking water (proxy for real foul sewage) and local groundwater (proxy for sewer infiltration) of 1.8 per thousand in delta18O and 11.7 per thousand in 62H. Diurnal variation of wastewater isotopic composition reflected both the varying rates of foul sewage production and irregular dispersion effects in the pipe network. The latter suggest the existence of larger cumulative backwater zone volumes, which have not been attended to yet. Infiltrating groundwater contributed 39% (95% confidence interval = +/- 2.5%) of the total daily dry weather wastewater discharge. This paper discusses all relevant aspects for practical application of the method. It presents a comprehensive framework for uncertainty analysis and details on the detection and discrimination of possibly interfering effects.

  10. Transcriptional delay stabilizes bistable gene networks.

    Science.gov (United States)

    Gupta, Chinmaya; López, José Manuel; Ott, William; Josić, Krešimir; Bennett, Matthew R

    2013-08-02

    Transcriptional delay can significantly impact the dynamics of gene networks. Here we examine how such delay affects bistable systems. We investigate several stochastic models of bistable gene networks and find that increasing delay dramatically increases the mean residence times near stable states. To explain this, we introduce a non-Markovian, analytically tractable reduced model. The model shows that stabilization is the consequence of an increased number of failed transitions between stable states. Each of the bistable systems that we simulate behaves in this manner.

  11. Recent results for random networks of automata

    International Nuclear Information System (INIS)

    Flyvbjerg, H.

    1987-05-01

    After a very brief historical and contextual introduction to random networks of automata we review recent numerical and analytical results. Open questions and unsolved problems are pointed out and discussed. One such question is also answered: it is shown that the size of the stable core can be used as order parameter for a transition between phases of frozen and chaotic network behavior. A mean-field-like but exact selfconsistency equation for the size of the stable core is given. A new derivation of critical parameter values follows from it. (orig.)

  12. Network Coded Software Defined Networking

    DEFF Research Database (Denmark)

    Krigslund, Jeppe; Hansen, Jonas; Roetter, Daniel Enrique Lucani

    2015-01-01

    incorporate content caching and storage, all of which are key challenges of the future Internet and the upcoming 5G networks. This paper proposes some of the keys behind this intersection and supports it with use cases as well as a an implementation that integrated the Kodo library (NC) into OpenFlow (SDN......Software Defined Networking (SDN) and Network Coding (NC) are two key concepts in networking that have garnered a large attention in recent years. On the one hand, SDN's potential to virtualize services in the Internet allows a large flexibility not only for routing data, but also to manage...... buffering, scheduling, and processing over the network. On the other hand, NC has shown great potential for increasing robustness and performance when deployed on intermediate nodes in the network. This new paradigm changes the dynamics of network protocols, requiring new designs that exploit its potential...

  13. Network Coded Software Defined Networking

    DEFF Research Database (Denmark)

    Hansen, Jonas; Roetter, Daniel Enrique Lucani; Krigslund, Jeppe

    2015-01-01

    Software defined networking has garnered large attention due to its potential to virtualize services in the Internet, introducing flexibility in the buffering, scheduling, processing, and routing of data in network routers. SDN breaks the deadlock that has kept Internet network protocols stagnant...... for decades, while applications and physical links have evolved. This article advocates for the use of SDN to bring about 5G network services by incorporating network coding (NC) functionalities. The latter constitutes a major leap forward compared to the state-of-the- art store and forward Internet paradigm....... The inherent flexibility of both SDN and NC provides fertile ground to envision more efficient, robust, and secure networking designs, which may also incorporate content caching and storage, all of which are key challenges of the upcoming 5G networks. This article not only proposes the fundamentals...

  14. Stable isotope analysis of dynamic lipidomics.

    Science.gov (United States)

    Brandsma, Joost; Bailey, Andrew P; Koster, Grielof; Gould, Alex P; Postle, Anthony D

    2017-08-01

    Metabolic pathway flux is a fundamental element of biological activity, which can be quantified using a variety of mass spectrometric techniques to monitor incorporation of stable isotope-labelled substrates into metabolic products. This article contrasts developments in electrospray ionisation mass spectrometry (ESI-MS) for the measurement of lipid metabolism with more established gas chromatography mass spectrometry and isotope ratio mass spectrometry methodologies. ESI-MS combined with diagnostic tandem MS/MS scans permits the sensitive and specific analysis of stable isotope-labelled substrates into intact lipid molecular species without the requirement for lipid hydrolysis and derivatisation. Such dynamic lipidomic methodologies using non-toxic stable isotopes can be readily applied to quantify lipid metabolic fluxes in clinical and metabolic studies in vivo. However, a significant current limitation is the absence of appropriate software to generate kinetic models of substrate incorporation into multiple products in the time domain. Finally, we discuss the future potential of stable isotope-mass spectrometry imaging to quantify the location as well as the extent of lipid synthesis. This article is part of a Special Issue entitled: BBALIP_Lipidomics Opinion Articles edited by Sepp Kohlwein. Copyright © 2017 Elsevier B.V. All rights reserved.

  15. Petrography, compositional characteristics and stable isotope ...

    African Journals Online (AJOL)

    Petrography, compositional characteristics and stable isotope geochemistry of the Ewekoro formation from Ibese Corehole, eastern Dahomey basin, southwestern Nigeria. ME Nton, MO ... Preserved pore types such as; intercrystaline, moldic and vuggy pores were observed as predominant conduits for fluids. The major ...

  16. petrography, compositional characteristics and stable isotope ...

    African Journals Online (AJOL)

    PROF EKWUEME

    Subsurface samples of the predominantly carbonate Ewekoro Formation, obtained from Ibese core hole within the Dahomey basin were used in this study. Investigations entail petrographic, elemental composition as well as stable isotopes (carbon and oxygen) geochemistry in order to deduce the different microfacies and ...

  17. Substitution of stable isotopes in Chlorella

    Science.gov (United States)

    Flaumenhaft, E.; Katz, J. J.; Uphaus, R. A.

    1969-01-01

    Replacement of biologically important isotopes in the alga Chlorella by corresponding heavier stable isotopes produces increasingly greater deviations from the normal cell size and changes the quality and distribution of certain cellular components. The usefulness of isotopically altered organisms increases interest in the study of such permuted organisms.

  18. Champion Island, Galapagos Stable Oxygen Calibration Data

    Data.gov (United States)

    National Oceanic and Atmospheric Administration, Department of Commerce — Galapagos Coral Stable Oxygen Calibration Data. Sites: Bartolome Island: 0 deg, 17 min S, 90 deg 33 min W. Champion Island: 1 deg, 15 min S, 90 deg, 05 min W. Urvina...

  19. Stable propagation of 'selfish'genetic elements

    Indian Academy of Sciences (India)

    Unknown

    viruses such as the Epstein-Barr virus (Harris et al 1985;. Kanda et al 2001) and bovine papilloma virus (Lehman and Botchan 1998; Ilves et al 1999), which exist pre- dominantly as extrachromosomal episomes, have been shown to utilize chromosome tethering as a means for stable segregation. The tethering mechanism ...

  20. Unconditionally stable perfectly matched layer boundary conditions

    NARCIS (Netherlands)

    De Raedt, H.; Michielsen, K.

    2007-01-01

    A brief review is given of a systematic, product-formula based approach to construct unconditionally stable algorithms for solving the time-dependent Maxwell equations. The fundamental difficulties that arise when we want to incorporate uniaxial perfectly matched layer boundary conditions into this

  1. Facies, dissolution seams and stable isotope compositions

    Indian Academy of Sciences (India)

    Stable isotope analysis of the limestone shows that 13C and 18O values are compatible with the early Mesoproterozoic open seawater composition. The ribbon limestone facies in the Rohtas Limestone is characterized by micritic beds, each decoupled in a lower band enriched and an upper band depleted in dissolution ...

  2. Connected domination stable graphs upon edge addition ...

    African Journals Online (AJOL)

    A set S of vertices in a graph G is a connected dominating set of G if S dominates G and the subgraph induced by S is connected. We study the graphs for which adding any edge does not change the connected domination number. Keywords: Connected domination, connected domination stable, edge addition ...

  3. Stable magnetic remanence in antiferromagnetic goethite.

    Science.gov (United States)

    Strangway, D W; McMahon, B E; Honea, R M

    1967-11-10

    Goethite, known to be antiferromagnetic, acquires thermoremanent magnetization at its Neel temperature of 120 degrees C. This remanence, extremely stable, is due to the presence of unbalanced spins in the antiferromagnetic structure; the spins may result from grain size, imperfections, or impurities.

  4. Stable Neural Control of Uncertain Multivariable Systems

    National Research Council Canada - National Science Library

    Mears, Mark

    2001-01-01

    ... that the trajectories remain bonded. Lyapunov analysis is used to derive equations for the sliding mode control, neural network training, and to show uniform ultimate boundedness of the closed loop systems...

  5. Strontium stable isotope behaviour accompanying basalt weathering

    Science.gov (United States)

    Burton, K. W.; Parkinson, I. J.; Gíslason, S. G. R.

    2016-12-01

    The strontium (Sr) stable isotope composition of rivers is strongly controlled by the balance of carbonate to silicate weathering (Krabbenhöft et al. 2010; Pearce et al. 2015). However, rivers draining silicate catchments possess distinctly heavier Sr stable isotope values than their bedrock compositions, pointing to significant fractionation during weathering. Some have argued for preferential release of heavy Sr from primary phases during chemical weathering, others for the formation of secondary weathering minerals that incorporate light isotopes. This study presents high-precision double-spike Sr stable isotope data for soils, rivers, ground waters and estuarine waters from Iceland, reflecting both natural weathering and societal impacts on those environments. The bedrock in Iceland is dominantly basaltic, d88/86Sr ≈ +0.27, extending to lighter values for rhyolites. Geothermal waters range from basaltic Sr stable compositions to those akin to seawater. Soil pore waters reflect a balance of input from primary mineral weathering, precipitation and litter recycling and removal into secondary phases and vegetation. Rivers and ground waters possess a wide range of d88/86Sr compositions from +0.101 to +0.858. Elemental and isotope data indicate that this fractionation primarily results from the formation or dissolution of secondary zeolite (d88/86Sr ≈ +0.10), but also carbonate (d88/86Sr ≈ +0.22) and sometimes anhydrite (d88/86Sr ≈ -0.73), driving the residual waters to heavier or lighter values, respectively. Estuarine waters largely reflect mixing with seawater, but are also be affected by adsorption onto particulates, again driving water to heavy values. Overall, these data indicate that the stability and nature of secondary weathering phases, exerts a strong control on the Sr stable isotope composition of silicate rivers. [1] Krabbenhöft et al. (2010) Geochim. Cosmochim. Acta 74, 4097-4109. [2] Pearce et al. (2015) Geochim. Cosmochim. Acta 157, 125-146.

  6. Development of a Safety Management Web Tool for Horse Stables.

    Science.gov (United States)

    Leppälä, Jarkko; Kolstrup, Christina Lunner; Pinzke, Stefan; Rautiainen, Risto; Saastamoinen, Markku; Särkijärvi, Susanna

    2015-11-12

    Managing a horse stable involves risks, which can have serious consequences for the stable, employees, clients, visitors and horses. Existing industrial or farm production risk management tools are not directly applicable to horse stables and they need to be adapted for use by managers of different types of stables. As a part of the InnoEquine project, an innovative web tool, InnoHorse, was developed to support horse stable managers in business, safety, pasture and manure management. A literature review, empirical horse stable case studies, expert panel workshops and stakeholder interviews were carried out to support the design. The InnoHorse web tool includes a safety section containing a horse stable safety map, stable safety checklists, and examples of good practices in stable safety, horse handling and rescue planning. This new horse stable safety management tool can also help in organizing work processes in horse stables in general.

  7. Innovation networks

    OpenAIRE

    Ahrweiler, Petra; Keane, Mark T.

    2013-01-01

    This paper advances a framework for modeling the component interactions between cognitive and social aspects of scientific creativity and technological innovation. Specifically, it aims to characterize Innovation Networks; those networks that involve the interplay of people, ideas and organizations to create new, technologically feasible, commercially-realizable products, processes and organizational structures. The tri-partite framework captures networks of ideas (Concept Level), people (Ind...

  8. Overlay Network

    OpenAIRE

    Kronstrand, Alexander; Holmqvist, Andreas

    2015-01-01

    Nowadays, optical fiber is widely used in several areas, especially in communication networking. The main reason is that optical fiber has low attenuation and high bandwidth. However, the switching functionality is performed in the electrical domain (inside the router), thus we have transmission delays in the network lanes. In this study we explore the possibility of developing a hardware “plug-in” that can be connected in parallel with routers of the network enabling the router with “plug-in...

  9. Innovation networking between stability and political dynamics

    DEFF Research Database (Denmark)

    Koch, Christian

    2004-01-01

    of the contribution is to challenge and transcend these notions and develop an understanding of innovation networks as an interplay between stable and dynamic elements, where political processes in innovation are much more than a disruptive and even a counterproductive feature. It reviews the growing number......This contribution views innovation as a social activity of building networks, using software product development in multicompany alliances and networks as example. Innovation networks are frequently understood as quite stable arrangements characterised by high trust among the participants. The aim...... of studies that highlight the political aspect of innovation. The paper reports on a study of innovation processes conducted within the EU—TSER-programme and a study made under the banner of management of technology. Intensive field studies in two constellations of enterprises were carried out. One...

  10. Technical Network

    CERN Multimedia

    2007-01-01

    In order to optimize the management of the Technical Network (TN), to ease the understanding and purpose of devices connected to the TN, and to improve security incident handling, the Technical Network Administrators and the CNIC WG have asked IT/CS to verify the "description" and "tag" fields of devices connected to the TN. Therefore, persons responsible for systems connected to the TN will receive email notifications from IT/CS asking them to add the corresponding information in the network database. Thank you very much for your cooperation. The Technical Network Administrators & the CNIC WG

  11. Network security

    CERN Document Server

    Perez, André

    2014-01-01

    This book introduces the security mechanisms deployed in Ethernet, Wireless-Fidelity (Wi-Fi), Internet Protocol (IP) and MultiProtocol Label Switching (MPLS) networks. These mechanisms are grouped throughout the book according to the following four functions: data protection, access control, network isolation, and data monitoring. Data protection is supplied by data confidentiality and integrity control services. Access control is provided by a third-party authentication service. Network isolation is supplied by the Virtual Private Network (VPN) service. Data monitoring consists of applying

  12. Network cohesion

    OpenAIRE

    Cavalcanti, Tiago V. V.; Giannitsarou, Chryssi; Johnson, Charles R.

    2016-01-01

    This is the final version of the article. It first appeared from Springer via http://dx.doi.org/10.1007/s00199-016-0992-1 We define a measure of network cohesion and show how it arises naturally in a broad class of dynamic models of endogenous perpetual growth with network externalities. Via a standard growth model, we show why network cohesion is crucial for conditional convergence and explain that as cohesion increases, convergence is faster. We prove properties of network cohesion and d...

  13. Socially Aware Heterogeneous Wireless Networks.

    Science.gov (United States)

    Kosmides, Pavlos; Adamopoulou, Evgenia; Demestichas, Konstantinos; Theologou, Michael; Anagnostou, Miltiades; Rouskas, Angelos

    2015-06-11

    The development of smart cities has been the epicentre of many researchers' efforts during the past decade. One of the key requirements for smart city networks is mobility and this is the reason stable, reliable and high-quality wireless communications are needed in order to connect people and devices. Most research efforts so far, have used different kinds of wireless and sensor networks, making interoperability rather difficult to accomplish in smart cities. One common solution proposed in the recent literature is the use of software defined networks (SDNs), in order to enhance interoperability among the various heterogeneous wireless networks. In addition, SDNs can take advantage of the data retrieved from available sensors and use them as part of the intelligent decision making process contacted during the resource allocation procedure. In this paper, we propose an architecture combining heterogeneous wireless networks with social networks using SDNs. Specifically, we exploit the information retrieved from location based social networks regarding users' locations and we attempt to predict areas that will be crowded by using specially-designed machine learning techniques. By recognizing possible crowded areas, we can provide mobile operators with recommendations about areas requiring datacell activation or deactivation.

  14. Revascularisation versus medical treatment in patients with stable coronary artery disease

    DEFF Research Database (Denmark)

    Windecker, Stephan; Stortecky, Stefan; Stefanini, Giulio G

    2014-01-01

    OBJECTIVE: To investigate whether revascularisation improves prognosis compared with medical treatment among patients with stable coronary artery disease. DESIGN: Bayesian network meta-analyses to combine direct within trial comparisons between treatments with indirect evidence from other trials...... while maintaining randomisation. ELIGIBILITY CRITERIA FOR SELECTING STUDIES: A strategy of initial medical treatment compared with revascularisation by coronary artery bypass grafting or Food and Drug Administration approved techniques for percutaneous revascularization: balloon angioplasty, bare metal...

  15. Auto-associative nanoelectronic neural network

    Energy Technology Data Exchange (ETDEWEB)

    Nogueira, C. P. S. M.; Guimarães, J. G. [Departamento de Engenharia Elétrica - Laboratório de Dispositivos e Circuito Integrado, Universidade de Brasília, CP 4386, CEP 70904-970 Brasília DF (Brazil)

    2014-05-15

    In this paper, an auto-associative neural network using single-electron tunneling (SET) devices is proposed and simulated at low temperature. The nanoelectronic auto-associative network is able to converge to a stable state, previously stored during training. The recognition of the pattern involves decreasing the energy of the input state until it achieves a point of local minimum energy, which corresponds to one of the stored patterns.

  16. Auto-associative nanoelectronic neural network

    International Nuclear Information System (INIS)

    Nogueira, C. P. S. M.; Guimarães, J. G.

    2014-01-01

    In this paper, an auto-associative neural network using single-electron tunneling (SET) devices is proposed and simulated at low temperature. The nanoelectronic auto-associative network is able to converge to a stable state, previously stored during training. The recognition of the pattern involves decreasing the energy of the input state until it achieves a point of local minimum energy, which corresponds to one of the stored patterns

  17. Cooperation in Peer-to-Peer Networks

    International Nuclear Information System (INIS)

    Gradowski, T.; Mrowinski, M.J.; Kosinski, R.A.

    2010-01-01

    This paper presents results of a research conducted on a simple model of a peer-to-peer network (a network in which users exchange files directly, without any central server involved). The conditions necessary for the file exchange process to be efficient and stable are investigated through numerical simulations and analytical calculations based on the master equation. Ways of preventing free-riding (selfish behavior, when users download files without sharing them) are also discussed.(author)

  18. Uncovering packaging features of co-regulated modules based on human protein interaction and transcriptional regulatory networks

    Directory of Open Access Journals (Sweden)

    He Weiming

    2010-07-01

    Full Text Available Abstract Background Network co-regulated modules are believed to have the functionality of packaging multiple biological entities, and can thus be assumed to coordinate many biological functions in their network neighbouring regions. Results Here, we weighted edges of a human protein interaction network and a transcriptional regulatory network to construct an integrated network, and introduce a probabilistic model and a bipartite graph framework to exploit human co-regulated modules and uncover their specific features in packaging different biological entities (genes, protein complexes or metabolic pathways. Finally, we identified 96 human co-regulated modules based on this method, and evaluate its effectiveness by comparing it with four other methods. Conclusions Dysfunctions in co-regulated interactions often occur in the development of cancer. Therefore, we focussed on an example co-regulated module and found that it could integrate a number of cancer-related genes. This was extended to causal dysfunctions of some complexes maintained by several physically interacting proteins, thus coordinating several metabolic pathways that directly underlie cancer.

  19. Robustness Analysis of Hybrid Stochastic Neural Networks with Neutral Terms and Time-Varying Delays

    Directory of Open Access Journals (Sweden)

    Chunmei Wu

    2015-01-01

    Full Text Available We analyze the robustness of global exponential stability of hybrid stochastic neural networks subject to neutral terms and time-varying delays simultaneously. Given globally exponentially stable hybrid stochastic neural networks, we characterize the upper bounds of contraction coefficients of neutral terms and time-varying delays by using the transcendental equation. Moreover, we prove theoretically that, for any globally exponentially stable hybrid stochastic neural networks, if additive neutral terms and time-varying delays are smaller than the upper bounds arrived, then the perturbed neural networks are guaranteed to also be globally exponentially stable. Finally, a numerical simulation example is given to illustrate the presented criteria.

  20. Stable isotopes for improving human nutrition

    International Nuclear Information System (INIS)

    Uauy, Ricardo

    2001-01-01

    recent FAO review of nutrition programs in 19 Latin American countries found that over 20 percent of the population - approximately 83 million people out of an estimated 414 million in the study countries - receives some level of benefits in nutrition-related programs. The allocation of limited national and international assistance resources for these activities in the region is on the order of several billion dollars annually. Undoubtedly these programs are influencing child growth. Significant reductions in underweight and wasting have occurred; but stunting has been more resistant to change. In this setting providing food supplements may be beneficial for some while it may be detrimental for others. The definition of who should benefit from the programs and what is the right combination of nutrients/foods, education, and lifestyle interventions that is required to optimise nutrition and health at each stage of the life cycle is a truly complex problem. This demands the use of the best scientific tools to define who should benefit, what should done and measured as an outcome, how programs should be evaluated, when programs should be expanded, and when they should be stopped. Isotopic and nuclear techniques are tools, not solutions. This presentation will serve to demonstrate how isotopes can contribute to refining nutrition interventions and their impact on public health. Isotopic methods can shorten the time needed to evaluate impact, because they provide sensitive measurements of biological effects. They are faster than traditional methods such as anthropometry for detecting changes in growth and body composition. Micronutrient malnutrition, and especially the bioavailability of vitamins and minerals from traditional foods, are not well evaluated using routine biochemical methods. Radioisotopes have been used successfully in the past. But recent developments in stable isotope techniques offer unique advantages for the design and evaluation of programmes that address

  1. On The Roman Domination Stable Graphs

    Directory of Open Access Journals (Sweden)

    Hajian Majid

    2017-11-01

    Full Text Available A Roman dominating function (or just RDF on a graph G = (V,E is a function f : V → {0, 1, 2} satisfying the condition that every vertex u for which f(u = 0 is adjacent to at least one vertex v for which f(v = 2. The weight of an RDF f is the value f(V (G = Pu2V (G f(u. The Roman domination number of a graph G, denoted by R(G, is the minimum weight of a Roman dominating function on G. A graph G is Roman domination stable if the Roman domination number of G remains unchanged under removal of any vertex. In this paper we present upper bounds for the Roman domination number in the class of Roman domination stable graphs, improving bounds posed in [V. Samodivkin, Roman domination in graphs: the class RUV R, Discrete Math. Algorithms Appl. 8 (2016 1650049].

  2. Design of optically stable image reflector system.

    Science.gov (United States)

    Tsai, Chung-Yu

    2013-08-01

    The design of a partially optically stable (POS) reflector system, in which the exit ray direction and image pose are unchanged as the reflector system rotates about a specific directional vector, was presented in an earlier study by the current group [Appl. Phys. B100, 883-890 (2010)]. The present study further proposes an optically stable image (OSI) reflector system, in which not only is the optical stability property of the POS system retained, but the image position and total ray path length are also fixed. An analytical method is proposed for the design of OSI reflector systems comprising multiple reflectors. The validity of the proposed approach is demonstrated by means of two illustrative examples.

  3. Stable microfluidic flow focusing using hydrostatics.

    Science.gov (United States)

    Gnyawali, Vaskar; Saremi, Mohammadali; Kolios, Michael C; Tsai, Scott S H

    2017-05-01

    We present a simple technique to generate stable hydrodynamically focused flows by driving the flow with hydrostatic pressure from liquid columns connected to the inlets of a microfluidic device. Importantly, we compare the focused flows generated by hydrostatic pressure and classical syringe pump driven flows and find that the stability of the hydrostatic pressure driven technique is significantly better than the stability achieved via syringe pumps, providing fluctuation-free focused flows that are suitable for sensitive microfluidic flow cytometry applications. We show that the degree of flow focusing with the hydrostatic method can be accurately controlled by the simple tuning of the liquid column heights. We anticipate that this approach to stable flow focusing will find many applications in microfluidic cytometry technologies.

  4. Utilization of stable isotopes in medicine

    International Nuclear Information System (INIS)

    1980-11-01

    The ten lectures given at this round table are presented together with a discussion. Five lectures, relating to studies in which deuterium oxide was employed as a tracer of body water, dealt with pulmonary water measurements in man and animals, the total water pool in adipose subjects, and liquid compartments in children undergoing hemodyalisis. The heavy water is analysed by infrared spectrometry and a new double spectrodoser is described. Two studies using 13 C as tracer, described the diagnosis of liver troubles and diabetes respectively. A general review of the perspectives of the application of stable isotopes in clinical medicine is followed by a comparison of the use of stable and radioactive isotopes in France [fr

  5. Overlay networks toward information networking

    CERN Document Server

    Tarkoma, Sasu

    2010-01-01

    With their ability to solve problems in massive information distribution and processing, while keeping scaling costs low, overlay systems represent a rapidly growing area of R&D with important implications for the evolution of Internet architecture. Inspired by the author's articles on content based routing, Overlay Networks: Toward Information Networking provides a complete introduction to overlay networks. Examining what they are and what kind of structures they require, the text covers the key structures, protocols, and algorithms used in overlay networks. It reviews the current state of th

  6. Tensor network models of unitary black hole evaporation

    Science.gov (United States)

    Leutheusser, Samuel; Van Raamsdonk, Mark

    2017-08-01

    We introduce a general class of toy models to study the quantum information-theoretic properties of black hole radiation. The models are governed by a set of isometries that specify how microstates of the black hole at a given energy evolve to entangled states of a tensor product black-hole/radiation Hilbert space. The final state of the black hole radiation is conveniently summarized by a tensor network built from these isometries. We introduce a set of quantities generalizing the Renyi entropies that provide a complete set of bipartite/multipartite entanglement measures, and give a general formula for the average of these over initial black hole states in terms of the isometries defining the model. For models where the dimension of the final tensor product radiation Hilbert space is the same as that of the space of initial black hole microstates, the entanglement structure is universal, independent of the choice of isometries. In the more general case, we find that models which best capture the "information-free" property of black hole horizons are those whose isometries are tensors corresponding to states of tripartite systems with maximally mixed subsystems.

  7. Network Protocols

    NARCIS (Netherlands)

    Tanenbaum, A.S.

    1981-01-01

    Dunng the last ten years, many computer networks have been designed, implemented, and put into service in the United States, Canada, Europe, Japan, and elsewhere. From the experience obtamed with these networks, certain key design principles have begun to emerge, principles that can be used to

  8. Organizational Networks

    DEFF Research Database (Denmark)

    Sørensen, Ole Henning; Grande, Bård

    1996-01-01

    The paper focuses on the concept of organizational networks. Four different uses of the concept are identified and critically discussed.......The paper focuses on the concept of organizational networks. Four different uses of the concept are identified and critically discussed....

  9. Probabilistic Networks

    DEFF Research Database (Denmark)

    Jensen, Finn Verner; Lauritzen, Steffen Lilholt

    2001-01-01

    This article describes the basic ideas and algorithms behind specification and inference in probabilistic networks based on directed acyclic graphs, undirected graphs, and chain graphs.......This article describes the basic ideas and algorithms behind specification and inference in probabilistic networks based on directed acyclic graphs, undirected graphs, and chain graphs....

  10. Networked Identities

    DEFF Research Database (Denmark)

    Ryberg, Thomas; Larsen, Malene Charlotte

    2008-01-01

    In this article we take up a critique of the concept of Communities of Practice (CoP) voiced by several authors, who suggest that networks may provide a better metaphor to understand social forms of organisation and learning. Through a discussion of the notion of networked learning and the critique...

  11. Thermally Stable, Latent Olefin Metathesis Catalysts

    OpenAIRE

    Thomas, Renee M.; Fedorov, Alexey; Keitz, Benjamin K.; Grubbs, Robert H.

    2011-01-01

    Highly thermally stable N-aryl,N-alkyl N-heterocyclic carbene (NHC) ruthenium catalysts were designed and synthesized for latent olefin metathesis. These catalysts showed excellent latent behavior toward metathesis reactions, whereby the complexes were inactive at ambient temperature and initiated at elevated temperatures, a challenging property to achieve with second generation catalysts. A sterically hindered N-tert-butyl substituent on the NHC ligand of the ruthenium complex was found to i...

  12. The nature of stable insomnia phenotypes.

    Science.gov (United States)

    Pillai, Vivek; Roth, Thomas; Drake, Christopher L

    2015-01-01

    We examined the 1-y stability of four insomnia symptom profiles: sleep onset insomnia; sleep maintenance insomnia; combined onset and maintenance insomnia; and neither criterion (i.e., insomnia cases that do not meet quantitative thresholds for onset or maintenance problems). Insomnia cases that exhibited the same symptom profile over a 1-y period were considered to be phenotypes, and were compared in terms of clinical and demographic characteristics. Longitudinal. Urban, community-based. Nine hundred fifty-four adults with Diagnostic and Statistical Manual of Mental Disorders, Fifth Edition based current insomnia (46.6 ± 12.6 y; 69.4% female). None. At baseline, participants were divided into four symptom profile groups based on quantitative criteria. Follow-up assessment 1 y later revealed that approximately 60% of participants retained the same symptom profile, and were hence judged to be phenotypes. Stability varied significantly by phenotype, such that sleep onset insomnia (SOI) was the least stable (42%), whereas combined insomnia (CI) was the most stable (69%). Baseline symptom groups (cross-sectionally defined) differed significantly across various clinical indices, including daytime impairment, depression, and anxiety. Importantly, however, a comparison of stable phenotypes (longitudinally defined) did not reveal any differences in impairment or comorbid psychopathology. Another interesting finding was that whereas all other insomnia phenotypes showed evidence of an elevated wake drive both at night and during the day, the 'neither criterion' phenotype did not; this latter phenotype exhibited significantly higher daytime sleepiness despite subthreshold onset and maintenance difficulties. By adopting a stringent, stability-based definition, this study offers timely and important data on the longitudinal trajectory of specific insomnia phenotypes. With the exception of daytime sleepiness, few clinical differences are apparent across stable phenotypes.

  13. A belief-based evolutionarily stable strategy

    OpenAIRE

    Deng, Xinyang; Wang, Zhen; Liu, Qi; Deng, Yong; Mahadevan, Sankaran

    2014-01-01

    As an equilibrium refinement of the Nash equilibrium, evolutionarily stable strategy (ESS) is a key concept in evolutionary game theory and has attracted growing interest. An ESS can be either a pure strategy or a mixed strategy. Even though the randomness is allowed in mixed strategy, the selection probability of pure strategy in a mixed strategy may fluctuate due to the impact of many factors. The fluctuation can lead to more uncertainty. In this paper, such uncertainty involved in mixed st...

  14. Stable iodine prophylaxis. Recommendations of the 2nd UK Working Group on Stable Iodine Prophylaxis

    Energy Technology Data Exchange (ETDEWEB)

    NONE

    2001-07-01

    The Working Group reviewed the revised Who guidance and the information published since 1991 on the risks of thyroid cancer in children from radioiodine and the risks of side effects from stable iodine. In particular, it reviewed data compiled on the incidence of thyroid cancers in children following the accident at the Chernobyl nuclear power plant in 1986. It considered whether the NRPB Earls were still appropriate, in the light of the new data. It also reviewed a range of other recommendations given by the 1st Working Group, concerning the chemical form of stable iodine tablets and practical issues concerning implementation of stable iodine prophylaxis. Finally, it reviewed the Patient Information Leaflet that is required, by law, to be included in each box of tablets and provided suggestions for information to be included in a separate information leaflet to be handed out to the public when stable iodine tablets are distributed.

  15. Network Affordances

    DEFF Research Database (Denmark)

    Samson, Audrey; Soon, Winnie

    2015-01-01

    This paper examines the notion of network affordance within the context of network art. Building on Gibson's theory (Gibson, 1979) we understand affordance as the perceived and actual parameters of a thing. We expand on Gaver's affordance of predictability (Gaver, 1996) to include ecological...... and computational parameters of unpredictability. We illustrate the notion of unpredictability by considering four specific works that were included in a network art exhibiton, SPEED SHOW [2.0] Hong Kong. The paper discusses how the artworks are contingent upon the parameteric relations (Parisi, 2013......), of the network. We introduce network affordance as a dynamic framework that could articulate the experienced tension arising from the (visible) symbolic representation of computational processes and its hidden occurrences. We base our proposal on the experience of both organising the SPEED SHOW and participating...

  16. Managing Networks

    DEFF Research Database (Denmark)

    Jørgensen, Heidi; Vintergaard, Christian

    Logically it seems that companies pursuing different business strategies wouldalso manage their relationships with other firms accordingly. Nevertheless, due tothe lack of research in the field of network strategies, this link still remainsinadequately examined. Based on the well-known framework...... of organisationalbehaviour developed by Miles and Snow (1978), this paper argues that thepatterns of network behaviour practiced by firms greatly depend on the businesstypology of the company. That is, a company's business typology will to a certaindegree dictate the network identity of the company. In this paper evidence...... elementsdistinguishing the types of network behaviour in relation to the business typology.The paper thus strives to argue how different business typologies develop anetwork identity on the basis of their network behaviour. Due to the correlationbetween a company's strategy, structure and processes and its pattern...

  17. Detonation of Meta-stable Clusters

    Energy Technology Data Exchange (ETDEWEB)

    Kuhl, Allen; Kuhl, Allen L.; Fried, Laurence E.; Howard, W. Michael; Seizew, Michael R.; Bell, John B.; Beckner, Vincent; Grcar, Joseph F.

    2008-05-31

    We consider the energy accumulation in meta-stable clusters. This energy can be much larger than the typical chemical bond energy (~;;1 ev/atom). For example, polymeric nitrogen can accumulate 4 ev/atom in the N8 (fcc) structure, while helium can accumulate 9 ev/atom in the excited triplet state He2* . They release their energy by cluster fission: N8 -> 4N2 and He2* -> 2He. We study the locus of states in thermodynamic state space for the detonation of such meta-stable clusters. In particular, the equilibrium isentrope, starting at the Chapman-Jouguet state, and expanding down to 1 atmosphere was calculated with the Cheetah code. Large detonation pressures (3 and 16 Mbar), temperatures (12 and 34 kilo-K) and velocities (20 and 43 km/s) are a consequence of the large heats of detonation (6.6 and 50 kilo-cal/g) for nitrogen and helium clusters respectively. If such meta-stable clusters could be synthesized, they offer the potential for large increases in the energy density of materials.

  18. Absolute exponential stability of recurrent neural networks with Lipschitz-continuous activation functions and time delays.

    Science.gov (United States)

    Cao, Jinde; Wang, Jun

    2004-04-01

    This paper investigates the absolute exponential stability of a general class of delayed neural networks, which require the activation functions to be partially Lipschitz continuous and monotone nondecreasing only, but not necessarily differentiable or bounded. Three new sufficient conditions are derived to ascertain whether or not the equilibrium points of the delayed neural networks with additively diagonally stable interconnection matrices are absolutely exponentially stable by using delay Halanay-type inequality and Lyapunov function. The stability criteria are also suitable for delayed optimization neural networks and delayed cellular neural networks whose activation functions are often nondifferentiable or unbounded. The results herein answer a question: if a neural network without any delay is absolutely exponentially stable, then under what additional conditions, the neural networks with delay is also absolutely exponentially stable.

  19. Phylogenetic trait-based analyses of ecological networks.

    Science.gov (United States)

    Rafferty, Nicole E; Ives, Anthony R

    2013-10-01

    Ecological networks of two interacting guilds of species, such as flowering plants and pollinators, are common in nature, and studying their structure can yield insights into their resilience to environmental disturbances. Here we develop analytical methods for exploring the strengths of interactions within bipartite networks consisting of two guilds of phylogenetically related species. We then apply these methods to investigate the resilience of a plant-pollinator community to anticipated climate change. The methods allow the statistical assessment of, for example, whether closely related pollinators are more likely to visit plants with similar relative frequencies, and whether closely related pollinators tend to visit closely related plants. The methods can also incorporate trait information, allowing us to identify which plant traits are likely responsible for attracting different pollinators. These questions are important for our study of 14 prairie plants and their 22 insect pollinators. Over the last 70 years, six of the plants have advanced their flowering, while eight have not. When we experimentally forced earlier flowering times, five of the six advanced-flowering species experienced higher pollinator visitation rates, whereas only one of the eight other species had more visits; this network thus appears resilient to climate change, because those species with advanced flowering have ample pollinators earlier in the season. Using the methods developed here, we show that advanced-flowering plants did not have a distinct pollinator community from the other eight species. Furthermore, pollinator phylogeny did not explain pollinator community composition; closely related pollinators were not more likely to visit the same plant species. However, differences among pollinator communities visiting different plants were explained by plant height, floral color, and symmetry. As a result, closely related plants attracted similar numbers of pollinators. By parsing out

  20. Two stable steady states in the Hodgkin-Huxley axons

    OpenAIRE

    Aihara, K.; Matsumoto, G.

    1983-01-01

    Two stable steady states were found in the numerical solution of the Hodgkin-Huxley equations for the intact squid axon bathed in potassium-rich sea water with an externally applied inward current. Under the conditions the two stable steady-states exist, the Hodgkin-Huxley equations have a complex bifurcation structure including, in addition to the two stable steady-states, a stable limit cycle, two unstable equilibrium points, and one asymptotically stable equilibrium point. It was also conc...

  1. Inferring new indications for approved drugs via random walk on drug-disease heterogenous networks.

    Science.gov (United States)

    Liu, Hui; Song, Yinglong; Guan, Jihong; Luo, Libo; Zhuang, Ziheng

    2016-12-23

    Since traditional drug research and development is often time-consuming and high-risk, there is an increasing interest in establishing new medical indications for approved drugs, referred to as drug repositioning, which provides a relatively low-cost and high-efficiency approach for drug discovery. With the explosive growth of large-scale biochemical and phenotypic data, drug repositioning holds great potential for precision medicine in the post-genomic era. It is urgent to develop rational and systematic approaches to predict new indications for approved drugs on a large scale. In this paper, we propose the two-pass random walks with restart on a heterogenous network, TP-NRWRH for short, to predict new indications for approved drugs. Rather than random walk on bipartite network, we integrated the drug-drug similarity network, disease-disease similarity network and known drug-disease association network into one heterogenous network, on which the two-pass random walks with restart is implemented. We have conducted performance evaluation on two datasets of drug-disease associations, and the results show that our method has higher performance than six existing methods. A case study on the Alzheimer's disease showed that nine of top 10 predicted drugs have been approved or investigational for neurodegenerative diseases. The experimental results show that our method achieves state-of-the-art performance in predicting new indications for approved drugs. We proposed a two-pass random walk with restart on the drug-disease heterogeneous network, referred to as TP-NRWRH, to predict new indications for approved drugs. Performance evaluation on two independent datasets showed that TP-NRWRH achieved higher performance than six existing methods on 10-fold cross validations. The case study on the Alzheimer's disease showed that nine of top 10 predicted drugs have been approved or are investigational for neurodegenerative diseases. The results show that our method achieves state

  2. Deep mining heterogeneous networks of biomedical linked data to predict novel drug-target associations.

    Science.gov (United States)

    Zong, Nansu; Kim, Hyeoneui; Ngo, Victoria; Harismendy, Olivier

    2017-08-01

    A heterogeneous network topology possessing abundant interactions between biomedical entities has yet to be utilized in similarity-based methods for predicting drug-target associations based on the array of varying features of drugs and their targets. Deep learning reveals features of vertices of a large network that can be adapted in accommodating the similarity-based solutions to provide a flexible method of drug-target prediction. We propose a similarity-based drug-target prediction method that enhances existing association discovery methods by using a topology-based similarity measure. DeepWalk, a deep learning method, is adopted in this study to calculate the similarities within Linked Tripartite Network (LTN), a heterogeneous network generated from biomedical linked datasets. This proposed method shows promising results for drug-target association prediction: 98.96% AUC ROC score with a 10-fold cross-validation and 99.25% AUC ROC score with a Monte Carlo cross-validation with LTN. By utilizing DeepWalk, we demonstrate that: (i) this method outperforms other existing topology-based similarity computation methods, (ii) the performance is better for tripartite than with bipartite networks and (iii) the measure of similarity using network topology outperforms the ones derived from chemical structure (drugs) or genomic sequence (targets). Our proposed methodology proves to be capable of providing a promising solution for drug-target prediction based on topological similarity with a heterogeneous network, and may be readily re-purposed and adapted in the existing of similarity-based methodologies. The proposed method has been developed in JAVA and it is available, along with the data at the following URL: https://github.com/zongnansu1982/drug-target-prediction . nazong@ucsd.edu. Supplementary data are available at Bioinformatics online. © The Author (2017). Published by Oxford University Press. All rights reserved. For Permissions, please email: journals.permissions@oup.com

  3. Social network analysis and dual rover communications

    Science.gov (United States)

    Litaker, Harry L.; Howard, Robert L.

    2013-10-01

    Social network analysis (SNA) refers to the collection of techniques, tools, and methods used in sociometry aiming at the analysis of social networks to investigate decision making, group communication, and the distribution of information. Human factors engineers at the National Aeronautics and Space Administration (NASA) conducted a social network analysis on communication data collected during a 14-day field study operating a dual rover exploration mission to better understand the relationships between certain network groups such as ground control, flight teams, and planetary science. The analysis identified two communication network structures for the continuous communication and Twice-a-Day Communication scenarios as a split network and negotiated network respectfully. The major nodes or groups for the networks' architecture, transmittal status, and information were identified using graphical network mapping, quantitative analysis of subjective impressions, and quantified statistical analysis using Sociometric Statue and Centrality. Post-questionnaire analysis along with interviews revealed advantages and disadvantages of each network structure with team members identifying the need for a more stable continuous communication network, improved robustness of voice loops, and better systems training/capabilities for scientific imagery data and operational data during Twice-a-Day Communications.

  4. Network structure exploration via Bayesian nonparametric models

    International Nuclear Information System (INIS)

    Chen, Y; Wang, X L; Xiang, X; Tang, B Z; Bu, J Z

    2015-01-01

    Complex networks provide a powerful mathematical representation of complex systems in nature and society. To understand complex networks, it is crucial to explore their internal structures, also called structural regularities. The task of network structure exploration is to determine how many groups there are in a complex network and how to group the nodes of the network. Most existing structure exploration methods need to specify either a group number or a certain type of structure when they are applied to a network. In the real world, however, the group number and also the certain type of structure that a network has are usually unknown in advance. To explore structural regularities in complex networks automatically, without any prior knowledge of the group number or the certain type of structure, we extend a probabilistic mixture model that can handle networks with any type of structure but needs to specify a group number using Bayesian nonparametric theory. We also propose a novel Bayesian nonparametric model, called the Bayesian nonparametric mixture (BNPM) model. Experiments conducted on a large number of networks with different structures show that the BNPM model is able to explore structural regularities in networks automatically with a stable, state-of-the-art performance. (paper)

  5. Technological Networks

    Science.gov (United States)

    Mitra, Bivas

    The study of networks in the form of mathematical graph theory is one of the fundamental pillars of discrete mathematics. However, recent years have witnessed a substantial new movement in network research. The focus of the research is shifting away from the analysis of small graphs and the properties of individual vertices or edges to consideration of statistical properties of large scale networks. This new approach has been driven largely by the availability of technological networks like the Internet [12], World Wide Web network [2], etc. that allow us to gather and analyze data on a scale far larger than previously possible. At the same time, technological networks have evolved as a socio-technological system, as the concepts of social systems that are based on self-organization theory have become unified in technological networks [13]. In today’s society, we have a simple and universal access to great amounts of information and services. These information services are based upon the infrastructure of the Internet and the World Wide Web. The Internet is the system composed of ‘computers’ connected by cables or some other form of physical connections. Over this physical network, it is possible to exchange e-mails, transfer files, etc. On the other hand, the World Wide Web (commonly shortened to the Web) is a system of interlinked hypertext documents accessed via the Internet where nodes represent web pages and links represent hyperlinks between the pages. Peer-to-peer (P2P) networks [26] also have recently become a popular medium through which huge amounts of data can be shared. P2P file sharing systems, where files are searched and downloaded among peers without the help of central servers, have emerged as a major component of Internet traffic. An important advantage in P2P networks is that all clients provide resources, including bandwidth, storage space, and computing power. In this chapter, we discuss these technological networks in detail. The review

  6. Resource Allocation for Downlink Multi-Cell OFDMA Cognitive Radio Network Using Hungarian Method

    Directory of Open Access Journals (Sweden)

    N. Forouzan

    2013-12-01

    Full Text Available This paper considers the problem of resource allocation for downlink part of an OFDM-based multi-cell cognitive radio network which consists of multiple secondary transmitters and receivers communicating simultaneously in the presence of multiple primary users. We present a new framework to maximize the total data throughput of secondary users by means of subchannel assignment, while ensuring interference leakage to PUs is below a threshold. In this framework, we first formulate the resource allocation problem as a nonlinear and non-convex optimization problem. Then we represent the problem as a maximum weighted matching in a bipartite graph and propose an iterative algorithm based on Hungarian method to solve it. The present contribution develops an efficient subchannel allocation algorithm that assigns subchannels to the secondary users without the perfect knowledge of fading channel gain between cognitive radio transmitter and primary receivers. The performance of the proposed subcarrier allocation algorithm is compared with a blind subchannel allocation as well as another scheme with the perfect knowledge of channel-state information. Simulation results reveal that a significant performance advantage can still be realized, even if the optimization at the secondary network is based on imperfect network information.

  7. Accelerating networks

    International Nuclear Information System (INIS)

    Smith, David M D; Onnela, Jukka-Pekka; Johnson, Neil F

    2007-01-01

    Evolving out-of-equilibrium networks have been under intense scrutiny recently. In many real-world settings the number of links added per new node is not constant but depends on the time at which the node is introduced in the system. This simple idea gives rise to the concept of accelerating networks, for which we review an existing definition and-after finding it somewhat constrictive-offer a new definition. The new definition provided here views network acceleration as a time dependent property of a given system as opposed to being a property of the specific algorithm applied to grow the network. The definition also covers both unweighted and weighted networks. As time-stamped network data becomes increasingly available, the proposed measures may be easily applied to such empirical datasets. As a simple case study we apply the concepts to study the evolution of three different instances of Wikipedia, namely, those in English, German, and Japanese, and find that the networks undergo different acceleration regimes in their evolution

  8. A Stable-Matching-Based User Linking Method with User Preference Order

    Directory of Open Access Journals (Sweden)

    Xuzhong Wang

    2017-01-01

    Full Text Available With the development of social networks, more and more users choose to use multiple accounts from different networks to meet their needs. Linking a particular user’s multiple accounts not only can improve user’s experience of the net-services such as recommender system, but also plays a significant role in network security. However, multiple accounts of the same user are often not directly linked to each other, and further, the privacy policy provided by the service provider makes it harder to find accounts for a particular user. In this paper, we propose a stable-matching-based method with user preference order for the problem of low accuracy of user linking in cross-media sparse data. Different from the traditional way which just calculates the similarity of accounts, we take full account of the mutual influence among multiple accounts by regarding different networks as bilateral (multilateral market and user linking as a stable matching problem in such a market. Based on the combination of Game-Theoretic Machine Learning and Pairwise, a novel user linking method has been proposed. The experiment shows that our method has a 21.6% improvement in accuracy compared with the traditional linking method and a further increase of about 7.8% after adding the prior knowledge.

  9. Multivariate Stable Isotope Analysis to Determine Linkages between Benzocaine Seizures

    Science.gov (United States)

    Kemp, H. F.; Meier-Augenstein, W.; Collins, M.; Salouros, H.; Cunningham, A.; Harrison, M.

    2012-04-01

    distribution network. More than 40 Benzocaine samples comprising both seized and control samples were analysed by two stable isotope forensic laboratories in two different countries (Australia and Scotland) to assess intra-lab reproducibility as well as inter-lab repeatability of measured stable isotope abundance values.

  10. Social networks

    CERN Document Server

    Etaner-Uyar, A Sima

    2014-01-01

    The present volume provides a comprehensive resource for practitioners and researchers alike-both those new to the field as well as those who already have some experience. The work covers Social Network Analysis theory and methods with a focus on current applications and case studies applied in various domains such as mobile networks, security, machine learning and health. With the increasing popularity of Web 2.0, social media has become a widely used communication platform. Parallel to this development, Social Network Analysis gained in importance as a research field, while opening up many

  11. Network Warrior

    CERN Document Server

    Donahue, Gary

    2011-01-01

    Pick up where certification exams leave off. With this practical, in-depth guide to the entire network infrastructure, you'll learn how to deal with real Cisco networks, rather than the hypothetical situations presented on exams like the CCNA. Network Warrior takes you step by step through the world of routers, switches, firewalls, and other technologies based on the author's extensive field experience. You'll find new content for MPLS, IPv6, VoIP, and wireless in this completely revised second edition, along with examples of Cisco Nexus 5000 and 7000 switches throughout. Topics include: An

  12. Group Centric Networking: Addressing Information Sharing Requirements at the Tactical Edge

    Science.gov (United States)

    2016-04-10

    tion well with fixed infrastructure and stable links where routes are maintained to enable all-to-all unicast connections. While cellular networks...each collaborative group can tune the network for its tolerances. C. Dynamic Network Adaptation In traditional IP networks, routing parameters such as...enables dynamic network adaptation on a per-group basis, giving greater fidelity in tactical mission planning. D. Group ID Mapping In GCN, interest

  13. Towards more stable operation of the Tokyo Tier2 center

    Science.gov (United States)

    Nakamura, T.; Mashimo, T.; Matsui, N.; Sakamoto, H.; Ueda, I.

    2014-06-01

    (Tokyo to New York and Tokyo to Los Angeles). The new line will be connected to LHCONE for the more improvement of the connectivity. In this circumstance, we are working for the further stable operation. For instance, we have newly introduced GPFS (IBM) for the non-grid disk storage, while Disk Pool Manager (DPM) are continued to be used as Tier2 disk storage from the previous system. Since the number of files stored in a DPM pool will be increased with increasing the total amount of data, the development of stable database configuration is one of the crucial issues as well as scalability. We have started some studies on the performance of asynchronous database replication so that we can take daily full backup. In this report, we would like to introduce several improvements in terms of the performances and stability of our new system and possibility of the further improvement of local I/O performance in the multi-core worker node. We also present the status of the wide area network connectivity from Japan to US and/or EU with LHCONE.

  14. Network Communication for Low Level RF Control

    International Nuclear Information System (INIS)

    Liu Weiqing; Yin Chengke; Zhang Tongxuan; Fu Zechuan; Liu Jianfei

    2009-01-01

    Low Level RF (LLRF) control system for storage ring of Shanghai Synchrotron Radiation Facility (SSRF) has been built by digital technology. The settings of parameters and the feedback loop status are carried out through the network communication interface, and the local oscillation and clock, which is the important component of the digital LLRF control system, are also configured through network communication. NIOS II processor was employed as a core to build the embedded system with a real-time operating system MicroC/OS-II, finally Lightweight TCP/IP (LwIP) was used to achieve the communication interface. The communication network is stable after a long-term operation. (authors)

  15. A Social Network Analysis of Occupational Segregation

    DEFF Research Database (Denmark)

    Buhai, Ioan Sebastian; van der Leij, Marco

    We develop a social network model of occupational segregation between different social groups, generated by the existence of positive inbreeding bias among individuals from the same group. If network referrals are important for job search, then expected homophily in the contact network structure...... induces different career choices for individuals from different social groups. This further translates into stable occupational segregation equilibria in the labor market. We derive the conditions for wage and unemployment inequality in the segregation equilibria and characterize first and second best...... social welfare optima. Surprisingly, we find that socially optimal policies involve segregation....

  16. LONG CHAINS OR STABLE COMMUNITIES? THE ROLE OF EMOTIONAL STABILITY IN TWITTER CONVERSATIONS

    DEFF Research Database (Denmark)

    Celli, Fabio; Rossi, Luca

    2014-01-01

    In this article, we address the issue of how emotional stability affects social relationships in Twitter. In particular, we focus our study on users’ communicative interactions, identified by the symbol “@.” We collected a corpus of about 200,000 Twitter posts, and we annotated it with our...... for the analysis of Twitter data. Social network analysis shows that, whereas secure users have more mutual connections, neurotic users post more than secure ones and have the tendency to build longer chains of interacting users. Clustering coefficient analysis reveals that, whereas secure users tend to build...... stronger networks, neurotic users have difficulty in belonging to a stable community; hence, they seek for new contacts in online social networks....

  17. Microbiological characterization of stable resuspended dust

    Directory of Open Access Journals (Sweden)

    Nora Kováts

    2016-06-01

    Full Text Available Objectives: Air quality in the stables is characterized by elevated level of dust and aeroallergens which are supposed to directly cause or exacerbate several respiratory disorders. The most often recognized problem is recurrent airway obstruction (RAO, previously known as chronic obstructive pulmonary disease (COPD. There is some indication that aeroallergens (among them endotoxins may also cause inflammation in human airways and may exceed safe levels in stables. Monitoring studies have covered mainly the determination of the concentration of respirable particles and of culturable fungi and their toxins. However, these particles do not only directly affect the respiratory system, but might act as a carrier conveying toxic contaminants and biological agents such as bacteria. In a typical, 20-horse Hungarian stable, microbial community of respirable fraction of resuspended dust has been characterized to reveal if these particles convey hazardous pathogenic bacteria, posing risk to either horses or staff. Material and Methods: Resuspended dust was sampled using a mobile instrument. The instrument contains a PARTISOL-FRM model 2000 sampler that was operated at a flow rate of 16.7 l/min and a cyclone separator which collected the particulate matter with an aerodynamic size between 1 μm and 10 μm (PM1–10 fraction. Microbial taxa were identified by culture-independent next generation sequencing (NGS of variable 16S ribosomal ribonucleic acid (rRNA gene regions. Results: In total, 1491 different taxa were identified, of them 384 were identified to species level, 961 to genus level. The sample was dominated by common ubiquitous soil and organic material-dwelling taxa. Conclusions: Pathogens occurred at low abundance, and were represented by mostly facultative human pathogens, with the prevalence of Staphylococcus species.

  18. Stable channel of reclaimed tidal lowland

    Science.gov (United States)

    Syarifudin, Achmad; Imanuddin, Momon S.; Moerwanto, Arie S.; Suryadi, F. X.

    2017-11-01

    This study aimed to develop models of the Operation and Maintenance in the reclaimed tidal marsh area to get a stable channel. The research location is reclaimed tidal delta area Telang I Primary 8 representing land typology A/B and a survey conducted in 13 South Secondary Schemes following existing tertiary Telang I. MIKE - 11 computer models used used to analyze the movement of sediment in the channel in both the Primary channel 8, SPD, SDU and tertiary channels in block 13 South. Calibration model with multiple channels in the field of physical parameters has been performed to obtain results close to the results of measurement modeling sediment movement in the channel. The integration models of MIKE - 11 models with various scenarios are used to model the operation and maintenance of the channel in the tidal marsh area to get a stable channel. According to the scheme P8 - 13S, OM models obtained 75 percent, in which the secondary channel (SPD/SDU) and built flap gate in tertiary channel, get a well prototype model of the stable channel (equilibriums), where the average erosion on P8 at a distance of 3,200 m in the amount of 4,472,049 m3 and the mean sedimentation in the SPD of 963,836 m3 and mean of sedimentation in the tertiary channel of 3,508,213 m3. Similarly, on average erosion P8 by 4,135,649 m3 and the mean sedimentation in the SDU of 681,304 m3 and the mean sedimentation in the tertiary channel of 3,454,345 m3.

  19. Aggressive Fibromatosis: Evidence for a Stable Phase

    Directory of Open Access Journals (Sweden)

    Gillian Mitchell

    1998-01-01

    Full Text Available Purpose. Aggressive fibromatosis (AF is an uncommon locally infiltrating benign disease of soft tissue for which treatment comprises complete surgical resection. Radiotherapy can be given postoperatively if the margin is incompletely resected. If the tumour is inoperable radiotherapy provides an alternative treatment. Hormone therapy and cytotoxic chemotherapy have also been used for unresectable or recurrent disease. All treatment modalities carry an associated morbidity. We believe that the natural history of aggressive fibromatosis may include a period of stable disease without progression, during which time, treatment is not always necessary.

  20. Stable isogeometric analysis of trimmed geometries

    Science.gov (United States)

    Marussig, Benjamin; Zechner, Jürgen; Beer, Gernot; Fries, Thomas-Peter

    2017-04-01

    We explore extended B-splines as a stable basis for isogeometric analysis with trimmed parameter spaces. The stabilization is accomplished by an appropriate substitution of B-splines that may lead to ill-conditioned system matrices. The construction for non-uniform knot vectors is presented. The properties of extended B-splines are examined in the context of interpolation, potential, and linear elasticity problems and excellent results are attained. The analysis is performed by an isogeometric boundary element formulation using collocation. It is argued that extended B-splines provide a flexible and simple stabilization scheme which ideally suits the isogeometric paradigm.

  1. computer networks

    Directory of Open Access Journals (Sweden)

    N. U. Ahmed

    2002-01-01

    Full Text Available In this paper, we construct a new dynamic model for the Token Bucket (TB algorithm used in computer networks and use systems approach for its analysis. This model is then augmented by adding a dynamic model for a multiplexor at an access node where the TB exercises a policing function. In the model, traffic policing, multiplexing and network utilization are formally defined. Based on the model, we study such issues as (quality of service QoS, traffic sizing and network dimensioning. Also we propose an algorithm using feedback control to improve QoS and network utilization. Applying MPEG video traces as the input traffic to the model, we verify the usefulness and effectiveness of our model.

  2. Heterodox networks

    DEFF Research Database (Denmark)

    Lala, Purnima; Kumar, Ambuj

    2016-01-01

    -Configurable Intelligent Distributed Antenna System (SCIDAS)’ that overlays intelligence over the conventional DAS architecture and latter is in the form of a swarm of intelligent hovering base stations working in a team to cooperatively resolve the PTC congestion at the Area of Event (AoE). A suitable network......It is imperative for the service providers to bring innovation in the network design to meet the exponential growth of mobile subscribers for multi-technology future wireless networks. As a matter of research, studies on providing services to moving subscriber groups aka ‘Place Time Capacity (PTC...... architecture of ‘Hovering Ad-hoc Network (HANET)’ for the latter will be deployed to assist and manage the overloaded primary base stations enhancing the on-demand coverage and capacity of the entire system. Proposed modes can either operate independently or as a cascaded architecture to form a Heterodox...

  3. Organizational Networks

    DEFF Research Database (Denmark)

    Grande, Bård; Sørensen, Ole Henning

    1998-01-01

    The paper focuses on the concept of organizational networks. Four different uses of the concept of organizational network are identified and critically discussed. Special focus is placed on how information and communication technologies as communication mediators and cognitive pictures influence...... the organizational forms discussed in the paper. It is asserted that the underlying organizational phenomena are not changing but that the manifestations and representations are shifting due to technological developments....

  4. Pintadas network

    OpenAIRE

    Cruz, Maria do Carmo Meirelles T.

    2006-01-01

    The Pintadas Network has been organized in Pintadas, a small municipality (11.254 inhabitants) in Bahia, located in the semi-arid region. It has been composed by civil society organizacions (social, productive, cultural and religious organizations and a credit cooperative), with support from the local town hall and from national and international institutions. The Network is a space for articulation, which intends to formulate, execute, follow-up, inspect and evaluate the municipal public pol...

  5. Neural networks

    International Nuclear Information System (INIS)

    Denby, Bruce; Lindsey, Clark; Lyons, Louis

    1992-01-01

    The 1980s saw a tremendous renewal of interest in 'neural' information processing systems, or 'artificial neural networks', among computer scientists and computational biologists studying cognition. Since then, the growth of interest in neural networks in high energy physics, fueled by the need for new information processing technologies for the next generation of high energy proton colliders, can only be described as explosive

  6. Network Flows

    Science.gov (United States)

    1988-12-01

    n Vlog n ), which is a linear time algorithm for all but the sparsest classes of shortest path problems. 3.4. Label Correcting Algorithms Label...11962] (Programming , Games and Transportation Networks), Iri (1969] (Network Flows, Transportation and Scheduling), Hu [1969] (Integer Programming and...though the improvements are not as dramatic as they have been for E>inic’s and the FIFO preflow push algorithms. For example, the 0(nm + n^ Vlog U

  7. Remarks on stable and quasi-stable k-strings at large N

    International Nuclear Information System (INIS)

    Armoni, A.; Shifman, M.

    2003-01-01

    We discuss k-strings in the large-N Yang-Mills theory and its supersymmetric extension. Whereas the tension of the bona fide (stable) QCD string is expected to depend only on the N-ality of the representation, tensions that depend on specific representation R are often reported in the lattice literature. In particular, adjoint strings are discussed and found in certain simulations. We clarify this issue by systematically exploiting the notion of the quasi-stable strings which becomes well-defined at large N. The quasi-stable strings with representation-dependent tensions decay, but the decay rate (per unit length per unit time) is suppressed as Λ 2 F(N) where F(N) falls off as a function of N. It can be determined on the case-by-case basis. The quasi-stable strings eventually decay into stable strings whose tension indeed depends only on the N-ality. We also briefly review large-N arguments showing why the Casimir formula for the string tension cannot be correct, and present additional arguments in favor of the sine formula. Finally, we comment on the relevance of our estimates to Euclidean lattice measurements

  8. Sentient networks

    Energy Technology Data Exchange (ETDEWEB)

    Chapline, G.

    1998-03-01

    The engineering problems of constructing autonomous networks of sensors and data processors that can provide alerts for dangerous situations provide a new context for debating the question whether man-made systems can emulate the cognitive capabilities of the mammalian brain. In this paper we consider the question whether a distributed network of sensors and data processors can form ``perceptions`` based on sensory data. Because sensory data can have exponentially many explanations, the use of a central data processor to analyze the outputs from a large ensemble of sensors will in general introduce unacceptable latencies for responding to dangerous situations. A better idea is to use a distributed ``Helmholtz machine`` architecture in which the sensors are connected to a network of simple processors, and the collective state of the network as a whole provides an explanation for the sensory data. In general communication within such a network will require time division multiplexing, which opens the door to the possibility that with certain refinements to the Helmholtz machine architecture it may be possible to build sensor networks that exhibit a form of artificial consciousness.

  9. Complex Networks

    CERN Document Server

    Evsukoff, Alexandre; González, Marta

    2013-01-01

    In the last decade we have seen the emergence of a new inter-disciplinary field focusing on the understanding of networks which are dynamic, large, open, and have a structure sometimes called random-biased. The field of Complex Networks is helping us better understand many complex phenomena such as the spread of  deseases, protein interactions, social relationships, to name but a few. Studies in Complex Networks are gaining attention due to some major scientific breakthroughs proposed by network scientists helping us understand and model interactions contained in large datasets. In fact, if we could point to one event leading to the widespread use of complex network analysis is the availability of online databases. Theories of Random Graphs from Erdös and Rényi from the late 1950s led us to believe that most networks had random characteristics. The work on large online datasets told us otherwise. Starting with the work of Barabási and Albert as well as Watts and Strogatz in the late 1990s, we now know th...

  10. Topological and functional properties of the small GTPases protein interaction network.

    Directory of Open Access Journals (Sweden)

    Anna Delprato

    Full Text Available Small GTP binding proteins of the Ras superfamily (Ras, Rho, Rab, Arf, and Ran regulate key cellular processes such as signal transduction, cell proliferation, cell motility, and vesicle transport. A great deal of experimental evidence supports the existence of signaling cascades and feedback loops within and among the small GTPase subfamilies suggesting that these proteins function in a coordinated and cooperative manner. The interplay occurs largely through association with bi-partite regulatory and effector proteins but can also occur through the active form of the small GTPases themselves. In order to understand the connectivity of the small GTPases signaling routes, a systems-level approach that analyzes data describing direct and indirect interactions was used to construct the small GTPases protein interaction network. The data were curated from the Search Tool for the Retrieval of Interacting Genes (STRING database and include only experimentally validated interactions. The network method enables the conceptualization of the overall structure as well as the underlying organization of the protein-protein interactions. The interaction network described here is comprised of 778 nodes and 1943 edges and has a scale-free topology. Rac1, Cdc42, RhoA, and HRas are identified as the hubs. Ten sub-network motifs are also identified in this study with themes in apoptosis, cell growth/proliferation, vesicle traffic, cell adhesion/junction dynamics, the nicotinamide adenine dinucleotide phosphate (NADPH oxidase response, transcription regulation, receptor-mediated endocytosis, gene silencing, and growth factor signaling. Bottleneck proteins that bridge signaling paths and proteins that overlap in multiple small GTPase networks are described along with the functional annotation of all proteins in the network.

  11. Community Core Evolution in Mobile Social Networks

    Directory of Open Access Journals (Sweden)

    Hao Xu

    2013-01-01

    Full Text Available Community detection in social networks attracts a lot of attention in the recent years. Existing methods always depict the relationship of two nodes using the temporary connection. However, these temporary connections cannot be fully recognized as the real relationships when the history connections among nodes are considered. For example, a casual visit in Facebook cannot be seen as an establishment of friendship. Hence, our question is the following: how to cluster the real friends in mobile social networks? In this paper, we study the problem of detecting the stable community core in mobile social networks. The cumulative stable contact is proposed to depict the relationship among nodes. The whole process is divided into timestamps. Nodes and their connections can be added or removed at each timestamp, and historical contacts are considered when detecting the community core. Also, community cores can be tracked through the incremental computing, which can help to recognize the evolving of community structure. Empirical studies on real-world social networks demonstrate that our proposed method can effectively detect stable community cores in mobile social networks.

  12. Multivariate Max-Stable Spatial Processes

    KAUST Repository

    Genton, Marc G.

    2014-01-06

    Analysis of spatial extremes is currently based on univariate processes. Max-stable processes allow the spatial dependence of extremes to be modelled and explicitly quantified, they are therefore widely adopted in applications. For a better understanding of extreme events of real processes, such as environmental phenomena, it may be useful to study several spatial variables simultaneously. To this end, we extend some theoretical results and applications of max-stable processes to the multivariate setting to analyze extreme events of several variables observed across space. In particular, we study the maxima of independent replicates of multivariate processes, both in the Gaussian and Student-t cases. Then, we define a Poisson process construction in the multivariate setting and introduce multivariate versions of the Smith Gaussian extremevalue, the Schlather extremal-Gaussian and extremal-t, and the BrownResnick models. Inferential aspects of those models based on composite likelihoods are developed. We present results of various Monte Carlo simulations and of an application to a dataset of summer daily temperature maxima and minima in Oklahoma, U.S.A., highlighting the utility of working with multivariate models in contrast to the univariate case. Based on joint work with Simone Padoan and Huiyan Sang.

  13. Application of stable isotope to breath test

    International Nuclear Information System (INIS)

    Sasaki, Yasuto

    1988-01-01

    Needles to say, radioisotopes have good characteristics as a tracer for examining biological functions. In fact, scyntigraphy is widely used over Japan. It is true, however, that there are some difficulties in applying radioisotopes to humans. Thus, greater attention began to be attracted to stable isotopes in the late 1960s, because these substances can be used for infants and pregnant women. They can be stored for a long period of time since they do not suffer damping as in the case of radioisotopes. In addition to serving as a tracer, stable isotopes can provide structural-chemical information including the position of isotope labels, and the mass and atomic composition of fragment ions. Such techniques as NMR spectroscopy is employed for this purpose. The method is currently used to perform examinations of congenital metabolic disorders. The carbon isotopes of 13 C and 14 C are used for breath test. Compounds labeled with these isotopes are administered and their ratio to the total CO 2 in breath is measured to diagnose diseases. In the early 1970s, 13 C has come into use for breath test. Similar breath test is applied to diagnosis of the bacterial overgrowth syndrome and ileal dysfunction syndrome. (Nogami, K.)

  14. Stable states in a strong IR field

    Science.gov (United States)

    Zhong, Changchun; Robicheaux, Francis

    2015-05-01

    It is found that 10% of atoms stay in the quasi-stable states after being exposed to intense laser or microwave (MW) pulses, even though the pulses' intensity is much stronger than that needed for static fields ionization. The reason why atoms survive those strong pulses has attracted growing attentions. A. Arakelyan et al. have observed the optical spectra of the surviving Lithium atoms after interaction with intense 38-GHz MW fields for more than 1000 cycles, and the spectra exhibit a periodic train of peaks 38 GHz apart. It suggests that those weakly bound Rydberg electrons seldom go back to the ionic core, where the cycle average energy exchange happens. In this study, we are interested in the electron behavior in the presence of intense infrared fields with a much shorter wavelength (1000 nm). By solving the full 3D time dependent Schrodinger equation, we calculate the spectra of the surviving atoms under intense IR fields. Our numerical calculations show atoms survive the intense field in quasi-stable states for a long time, and the optical spectra are obviously modulated by the IR frequency. Through tuning the ponderomotive energy, we see how field parameters affect the behavior of electrons. Different atoms, such as Hydrogen, Helium, Lithium, and Sodium, are tested to see how atom's energy structures influence the results.

  15. Color stable manganese-doped phosphors

    Science.gov (United States)

    Lyons, Robert Joseph [Burnt Hills, NY; Setlur, Anant Achyut [Niskayuna, NY; Deshpande, Anirudha Rajendra [Twinsburg, OH; Grigorov, Ljudmil Slavchev [Sofia, BG

    2012-08-28

    A process for preparing color stable Mn.sup.+4 doped phosphors includes providing a phosphor of formula I; A.sub.x[MF.sub.y]:Mn.sup.+4 I and contacting the phosphor in particulate form with a saturated solution of a composition of formula II in aqueous hydrofluoric acid; A.sub.x[MF.sub.y]; II wherein A is Li, Na, K, Rb, Cs, NR.sub.4 or a combination thereof; M is Si, Ge, Sn, Ti, Zr, Al, Ga, In, Sc, Y, La, Nb, Ta, Bi, Gd, or a combination thereof; R is H, lower alkyl, or a combination thereof; x is the absolute value of the charge of the [MF.sub.y] ion; and y is 5, 6 or 7. In particular embodiments, M is Si, Ge, Sn, Ti, Zr, or a combination thereof. A lighting apparatus capable of emitting white light includes a semiconductor light source; and a phosphor composition radiationally coupled to the light source, and which includes a color stable Mn.sup.+4 doped phosphor.

  16. Relativistic quantum correlations in bipartite fermionic states

    Indian Academy of Sciences (India)

    2016-09-21

    Sep 21, 2016 ... 1Department of Physics, COMSATS Institute of Information Technology, Park Road, Tarlai Kalan 45550,. Islamabad, Pakistan. 2CFP and Departamento de Física, Faculdade de Ciências, Universidade do Porto, 4169-007 Porto, Portugal. ∗. Corresponding author. E-mail: sksafi@comsats.edu.pk; ...

  17. Relativistic quantum correlations in bipartite fermionic states

    Indian Academy of Sciences (India)

    Author Affiliations. S KHAN1 N A KHAN2. Department of Physics, COMSATS Institute of Information Technology, Park Road, Tarlai Kalan 45550, Islamabad, Pakistan; CFP and Departamento de Física, Faculdade de Ciências, Universidade do Porto, 4169-007 Porto, Portugal ...

  18. Neural Networks

    International Nuclear Information System (INIS)

    Smith, Patrick I.

    2003-01-01

    Physicists use large detectors to measure particles created in high-energy collisions at particle accelerators. These detectors typically produce signals indicating either where ionization occurs along the path of the particle, or where energy is deposited by the particle. The data produced by these signals is fed into pattern recognition programs to try to identify what particles were produced, and to measure the energy and direction of these particles. Ideally, there are many techniques used in this pattern recognition software. One technique, neural networks, is particularly suitable for identifying what type of particle caused by a set of energy deposits. Neural networks can derive meaning from complicated or imprecise data, extract patterns, and detect trends that are too complex to be noticed by either humans or other computer related processes. To assist in the advancement of this technology, Physicists use a tool kit to experiment with several neural network techniques. The goal of this research is interface a neural network tool kit into Java Analysis Studio (JAS3), an application that allows data to be analyzed from any experiment. As the final result, a physicist will have the ability to train, test, and implement a neural network with the desired output while using JAS3 to analyze the results or output. Before an implementation of a neural network can take place, a firm understanding of what a neural network is and how it works is beneficial. A neural network is an artificial representation of the human brain that tries to simulate the learning process [5]. It is also important to think of the word artificial in that definition as computer programs that use calculations during the learning process. In short, a neural network learns by representative examples. Perhaps the easiest way to describe the way neural networks learn is to explain how the human brain functions. The human brain contains billions of neural cells that are responsible for processing

  19. Take it of leave it : Mechanisms underlying bacterial bistable regulatory networks

    NARCIS (Netherlands)

    Siebring, Jeroen; Sorg, Robin; Herber, Martijn; Kuipers, Oscar; Filloux, Alain A.M.

    2012-01-01

    Bistable switches occur in regulatory networks that can exist in two distinct stable states. Such networks allow distinct switching of individual cells. In bacteria these switches coexist with regulatory networks that respond gradually to environmental input. Bistable switches play key roles in high

  20. Estimation of Time-Varying Autoregressive Symmetric Alpha Stable

    Data.gov (United States)

    National Aeronautics and Space Administration — In the last decade alpha-stable distributions have become a standard model for impulsive data. Especially the linear symmetric alpha-stable processes have found...