WorldWideScience

Sample records for network fews net

  1. Famine Early Warning Systems Network (FEWS NET) Contributions to Strengthening Resilience and Sustainability for the East African Community

    Science.gov (United States)

    Budde, M. E.; Galu, G.; Funk, C. C.; Verdin, J. P.; Rowland, J.

    2014-12-01

    The Planning for Resilience in East Africa through Policy, Adaptation, Research, and Economic Development (PREPARED) is a multi-organizational project aimed at mainstreaming climate-resilient development planning and program implementation into the East African Community (EAC). The Famine Early Warning Systems Network (FEWS NET) has partnered with the PREPARED project to address three key development challenges for the EAC; 1) increasing resiliency to climate change, 2) managing trans-boundary freshwater biodiversity and conservation and 3) improving access to drinking water supply and sanitation services. USGS FEWS NET has been instrumental in the development of gridded climate data sets that are the fundamental building blocks for climate change adaptation studies in the region. Tools such as the Geospatial Climate Tool (GeoCLIM) have been developed to interpolate time-series grids of precipitation and temperature values from station observations and associated satellite imagery, elevation data, and other spatially continuous fields. The GeoCLIM tool also allows the identification of anomalies and assessments of both their frequency of occurrence and directional trends. A major effort has been put forth to build the capacities of local and regional institutions to use GeoCLIM to integrate their station data (which is not typically available to the public) into improved national and regional gridded climate data sets. In addition to the improvements and capacity building activities related to geospatial analysis tools, FEWS NET will assist in two other areas; 1) downscaling of climate change scenarios and 2) vulnerability impact assessments. FEWS NET will provide expertise in statistical downscaling of Global Climate Model output fields and work with regional institutions to assess results of other downscaling methods. Completion of a vulnerability impact assessment (VIA) involves the examination of sectoral consequences in identified climate "hot spots". FEWS NET

  2. Evaluation of Famine Early Warning Systems Network (FEWS NET) Land Data Assimilation System (FLDAS) and application in East Africa

    Science.gov (United States)

    Pervez, M. S.; McNally, A.; Shukla, S.

    2016-12-01

    Convergence of evidence from different sources of agro-hydrologic information is particularly important for drought monitoring in data sparse regions. In Africa a combination of remote sensing and land surface modeling experiments are used to evaluate past, present and future drought conditions. The Famine Early Warning Systems Network (FEWS NET) Land Data Assimilation System (FLDAS), which is a custom instance of the NASA Land Information System, routinely simulates daily soil moisture and other variables over East, West and Southern Africa using multiple models and inputs. We find that Noah 3.3 and Variable Infiltration Capacity (VIC) 4.1.2 land surface models based FLDAS simulations of monthly wetness percentile soil moisture maps captured concurrent drought and water surplus episodes effectively over East Africa. However, the results are sensitive to selection of land surface model and hydrometeorological forcings. This work seeks to identify sources of uncertainty (input, model, parameter) to eventually improve the accuracy of FLDAS outputs. In absence of in situ data previous work has used European Space Agency Climate Change Initiative Soil Moisture (CCI-SM) data measured from merged active-passive microwave remote sensing to evaluate FLDAS soil moisture calculations over East Africa based on Noah 3.3 and VIC 4.1.2, and found that during the high rainfall months of April-May and November-December pixel-wise correlations were relatively better between Noah soil moisture and CCI-SM over the greater horn. We have also found good correlations (r>0.6) for FLDAS Noah 3.3 evapotranspiration (ET) anomalies and Operational Simplified Surface Energy Balance (SSEBop) ET over East and Southern Africa. To further investigate the reasons for differences between models we evaluate FLDAS outputs with respect to Advanced Scatterometer and Soil Moisture Active Passive soil moisture, Moderate Resolution Imaging Spectroradiometer and Advanced Very High Resolution Radiometer

  3. FEWS NET Price Volatility Data 2002-2012

    Data.gov (United States)

    US Agency for International Development — This dataset from the Famine Early Warning System Network (FEWS NET) documents ten years, from 2002 to 2012, of cereal price fluctuations across twenty-five African...

  4. Earth Observations for Early Detection of Agricultural Drought in Countries at Risk: Contributions of the Famine Early Warning Systems Network (FEWS NET) (Invited)

    Science.gov (United States)

    Verdin, J. P.; Rowland, J.; Senay, G. B.; Funk, C. C.; Budde, M. E.; Husak, G. J.; Jayanthi, H.

    2013-12-01

    The Group on Earth Observations' Global Agricultural Monitoring (GEOGLAM) implementation plan emphasizes the information needs of countries at risk of food insecurity emergencies. Countries in this category are often vulnerable to disruption of agricultural production due to drought, while at the same time they lack well developed networks of in-situ observations to support early drought detection. Consequently, it is vital that Earth observations by satellites supplement those available from surface stations. The USGS, in its role as a FEWS NET implementing partner, has recently developed a number of new applications of satellite observations for this purpose. (1) In partnership with the University of California, Santa Barbara, a 30+ year time series of gridded precipitation estimates (CHIRPS) has been developed by blending NOAA GridSat B1 geostationary thermal infrared imagery with station observations using robust geostatistical methods. The core data set consists of pentadal (5-daily) accumulations from 1981-2013 at 0.05 degree spatial resolution between +/- 50 degrees latitude. Validation has been recently completed, and applications for gridded crop water balance calculations and mapping the Standardized Precipitation Index are in development. (2) Actual evapotranspiration (ETa) estimates using MODIS Land Surface Temperature (LST) data at 1-km have been successfully demonstrated using the operational Simplified Surface Energy Balance model with 8-day composites from the LPDAAC. A new, next-day latency implementation using daily LST swath data from the NASA LANCE server is in development for all the crop growing regions of the world. This ETa processing chain follows in the footsteps of (3) the expedited production of MODIS 250-meter NDVI images every five days at USGS EROS, likewise using LANCE daily swath data as input since 2010. Coverage includes Africa, Central Asia, the Middle East, Central America, and the Caribbean. (4) A surface water point monitoring

  5. Linking Research to Practice: FEWS NET and Its Use of Satellite Remote Sensing Data

    Science.gov (United States)

    Brown, Molly E.; Brickley, Elizabeth B.

    2011-01-01

    The purpose of the Famine Early Warning Systems Network (FEWS NET) is to collaborate with international, regional and national partners to provide timely and rigorous early warning and vulnerability information on emerging and evolving food security issues

  6. NetWorking News

    DEFF Research Database (Denmark)

    Fritsch, Jonas; Iversen, Ole Sejer; Dindler, Christian

    with adults or children. However there is a need for new methods to support communication and collaboration between designers and children. This article proposes a new method for understandings children’s appropriation of new technology in an interactive workshop setting. The method, which we call...... the Networking News workshop, offers an opportunity to make first hand studies of children’s IT supported social activities in an informal classroom setting....

  7. NetWorking News

    DEFF Research Database (Denmark)

    Fritsch, Jonas; Iversen, Ole Sejer; Dindler, Christian

    For many years cooperative design was primarily concerned with the development of IT supported systems for professional users. However, the cooperative design approach can embrace other social practices such as children’s everyday life. At a methodological level there is no difference in designin...... the Networking News workshop, offers an opportunity to make first hand studies of children’s IT supported social activities in an informal classroom setting....

  8. Impact of Social Networking Sites in Bangladesh: Few Possible Solutions

    OpenAIRE

    Md. Omar Faruq; Alim-Al-Reza; Md. Mahbubur Rahman; Mohammad Raisul Alam

    2017-01-01

    Bangladesh is a developing country. But in few recent years this country is going to be turned as digitalized. The first condition of being digitalization is the whole communication system of the country have to be developed tremendously. If we notice about the communication system, then Social Networking Sites can be a platform of revolution. This study is based on the perspective of Bangladesh on Social Networking Sites(SNS). In Bangladesh, Social Networking Sites ar...

  9. NetBench. Automated Network Performance Testing

    CERN Document Server

    Cadeddu, Mattia

    2016-01-01

    In order to evaluate the operation of high performance routers, CERN has developed the NetBench software to run benchmarking tests by injecting various traffic patterns and observing the network devices behaviour in real-time. The tool features a modular design with a Python based console used to inject traffic and collect the results in a database, and a web user

  10. Few-shot learning in deep networks through global prototyping.

    Science.gov (United States)

    Blaes, Sebastian; Burwick, Thomas

    2017-10-01

    Training a deep convolution neural network (CNN) to succeed in visual object classification usually requires a great number of examples. Here, starting from such a pre-learned CNN, we study the task of extending the network to classify additional categories on the basis of only few examples ("few-shot learning"). We find that a simple and fast prototype-based learning procedure in the global feature layers ("Global Prototype Learning", GPL) leads to some remarkably good classification results for a large portion of the new classes. It requires only up to ten examples for the new classes to reach a plateau in performance. To understand this few-shot learning performance resulting from GPL as well as the performance of the original network, we use the t-SNE method (Maaten and Hinton, 2008) to visualize clusters of object category examples. This reveals the strong connection between classification performance and data distribution and explains why some new categories only need few examples for learning while others resist good classification results even when trained with many more examples. Copyright © 2017 Elsevier Ltd. All rights reserved.

  11. SkyNet: A Modular Nuclear Reaction Network Library

    Science.gov (United States)

    Lippuner, Jonas; Roberts, Luke F.

    2017-12-01

    Almost all of the elements heavier than hydrogen that are present in our solar system were produced by nuclear burning processes either in the early universe or at some point in the life cycle of stars. In all of these environments, there are dozens to thousands of nuclear species that interact with each other to produce successively heavier elements. In this paper, we present SkyNet, a new general-purpose nuclear reaction network that evolves the abundances of nuclear species under the influence of nuclear reactions. SkyNet can be used to compute the nucleosynthesis evolution in all astrophysical scenarios where nucleosynthesis occurs. SkyNet is free and open source, and aims to be easy to use and flexible. Any list of isotopes can be evolved, and SkyNet supports different types of nuclear reactions. SkyNet is modular so that new or existing physics, like nuclear reactions or equations of state, can easily be added or modified. Here, we present in detail the physics implemented in SkyNet with a focus on a self-consistent transition to and from nuclear statistical equilibrium to non-equilibrium nuclear burning, our implementation of electron screening, and coupling of the network to an equation of state. We also present comprehensive code tests and comparisons with existing nuclear reaction networks. We find that SkyNet agrees with published results and other codes to an accuracy of a few percent. Discrepancies, where they exist, can be traced to differences in the physics implementations.

  12. Time-division-multiplexed few-mode passive optical network.

    Science.gov (United States)

    Xia, Cen; Chand, Naresh; Velázquez-Benítez, A M; Yang, Zhiqun; Liu, Xiang; Antonio-Lopez, Jose Enrique; Wen, He; Zhu, Benyuan; Zhao, Ningbo; Effenberger, Frank; Amezcua-Correa, Rodrigo; Li, Guifang

    2015-01-26

    We demonstrate the first few-mode-fiber based passive optical network, effectively utilizing mode multiplexing to eliminate combining loss for upstream traffic. Error-free performance has been achieved for 20-km low-crosstalk 3-mode transmission in a commercial GPON system carrying live Ethernet traffic. The alternative approach of low modal group delay is also analyzed with simulation results over 10 modes.

  13. Stochastic petri nets for wireless networks

    CERN Document Server

    Lei, Lei; Zhong, Zhangdui

    2015-01-01

    This SpringerBrief presents research in the application of Stochastic Petri Nets (SPN) to the performance evaluation of wireless networks under bursty traffic. It covers typical Quality-of-Service performance metrics such as mean throughput, average delay and packet dropping probability. Along with an introduction of SPN basics, the authors introduce the key motivation and challenges of using SPN to analyze the resource sharing performance in wireless networks. The authors explain two powerful modeling techniques that treat the well-known state space explosion problem: model decomposition and

  14. A programmable optical few wavelength source for flexgrid optical networks

    Science.gov (United States)

    Imran, M.; Fresi, F.; Meloni, G.; Bhowmik, B. B.; Sambo, N.; Potì, L.

    2016-07-01

    Multi-wavelength (MW) sources will probably replace discrete lasers or laser arrays in next generation multi-carrier transponders (e.g., 1 Tb/s), currently called multi-flow transponders or sliceable bandwidth variable transponders (SBVTs). We present design and experimental demonstration of a few wavelength (FW) source suitable for SBVTs in a flexgrid scenario. We refer to FW instead of MW since for an SBVT just few subcarriers are required (e.g., eight). The proposed FW source does not require optical filtering for subcarrier modulation. The design exploits frequency shifting in IQ modulators by using single side band suppressed carrier modulation. A reasonable number of lines can be provided depending on the chosen architecture, tunable in the whole C-band. The scheme is also capable of providing symmetric (equally spaced) and asymmetric subcarrier spacing arbitrarily tunable from 6.25 GHz to 37.5 GHz. The control on the number of subcarriers (increase/decrease depending on line rate) provides flexibility to the SBVT, being the spacing dependent on transmission parameters such as line rate or modulation format. Transmission performance has been tested and compared with an array of standard lasers considering a 480 Gb/s transmission for different carrier spacing. Additionally, an integrable solution based on complementary frequency shifter is also presented to improve scalability and costs. The impact on transceiver techno-economics and network performance is also discussed.

  15. SkyNet: Modular nuclear reaction network library

    Science.gov (United States)

    Lippuner, Jonas; Roberts, Luke F.

    2017-10-01

    The general-purpose nuclear reaction network SkyNet evolves the abundances of nuclear species under the influence of nuclear reactions. SkyNet can be used to compute the nucleosynthesis evolution in all astrophysical scenarios where nucleosynthesis occurs. Any list of isotopes can be evolved and SkyNet supports various different types of nuclear reactions. SkyNet is modular, permitting new or existing physics, such as nuclear reactions or equations of state, to be easily added or modified.

  16. Using NetMaster to manage IBM networks

    Science.gov (United States)

    Ginsburg, Guss

    1991-01-01

    After defining a network and conveying its importance to support the activities at the JSC, the need for network management based on the size and complexity of the IBM SNA network at JSC is demonstrated. Network Management consists of being aware of component status and the ability to control resources to meet the availability and service needs of users. The concerns of the user are addressed as well as those of the staff responsible for managing the network. It is explained how NetMaster (a network management system for managing SNA networks) is used to enhance reliability and maximize service to SNA network users through automated procedures. The following areas are discussed: customization, problem and configuration management, and system measurement applications of NetMaster. Also, several examples are given that demonstrate NetMaster's ability to manage and control the network, integrate various product functions, as well as provide useful management information.

  17. CifNet network multi-well data management system

    Science.gov (United States)

    Li, Ning; Wang, Mingchao; Cui, Jian; Wang, Jianqiang; Wang, Caizhi

    2004-10-01

    The CifNet network multi-well data management system is developed for 100MB or 1000MB local network environments which are used in Chinese oil industry. The kernel techniques of CifNet system include: 1, establishing a high efficient and low cost network multi-well data management architecture based on the General Logging Curve Theory and the Cif data format; 2, implementing efficient visit and transmission of multi-well data in C/S local network based on TCP/IP protocol; 3, ensuring the safety of multi-well data in store, visit and application based on Unix operating system security. By using CifNet system, the researcher in office or at home can visit curves of any borehole in any working area of any oilfield. The application foreground of CifNet system is also commented.

  18. The 2007 flood in the Sahel: causes, characteristics and its presentation in the media and FEWS NET

    Directory of Open Access Journals (Sweden)

    C. Samimi

    2012-02-01

    Full Text Available During the rainy season in 2007, reports about exceptional rains and floodings in the Sahel were published in the media, especially in August and September. Institutions and organizations like the World Food Programme (WFP and FEWS NET put the events on the agenda and released alerts and requested help. The partly controversial picture was that most of the Sahel faced a crisis caused by widespread floodings. Our study shows that the rainy season in 2007 was exceptional with regard to rainfall amount and return periods. In many areas the event had a return period between 1 and 50 yr with high spatial heterogeneity, with the exception of the Upper Volta basin, which yielded return periods of up to 1200 yr. Despite the strong rainfall, the interpretation of satellite images show that the floods were mainly confined to lakes and river beds. However, the study also proves the difficulties in assessing the meteorological processes and the demarcation of flooded areas in satellite images without ground truthing. These facts and the somewhat vague and controversial reports in the media and FEWS NET demonstrate that it is crucial to thoroughly analyze such events at a regional and local scale involving the local population.

  19. Reconstruction of LGT networks from tri-LGT-nets.

    Science.gov (United States)

    Cardona, Gabriel; Pons, Joan Carles

    2017-12-01

    Phylogenetic networks have gained attention from the scientific community due to the evidence of the existence of evolutionary events that cannot be represented using trees. A variant of phylogenetic networks, called LGT networks, models specifically lateral gene transfer events, which cannot be properly represented with generic phylogenetic networks. In this paper we treat the problem of the reconstruction of LGT networks from substructures induced by three leaves, which we call tri-LGT-nets. We first restrict ourselves to a class of LGT networks that are both mathematically treatable and biologically significant, called BAN-LGT networks. Then, we study the decomposition of such networks in subnetworks with three leaves and ask whether or not this decomposition determines the network. The answer to this question is negative, but if we further impose time-consistency (species involved in a later gene transfer must coexist) the answer is affirmative, up to some redundancy that can never be recovered but is fully characterized.

  20. Africa-wide monitoring of small surface water bodies using multisource satellite data: a monitoring system for FEWS NET: chapter 5

    Science.gov (United States)

    Velpuri, Naga Manohar; Senay, Gabriel B.; Rowland, James; Verdin, James P.; Alemu, Henok; Melesse, Assefa M.; Abtew, Wossenu; Setegn, Shimelis G.

    2014-01-01

    Continental Africa has the highest volume of water stored in wetlands, large lakes, reservoirs, and rivers, yet it suffers from problems such as water availability and access. With climate change intensifying the hydrologic cycle and altering the distribution and frequency of rainfall, the problem of water availability and access will increase further. Famine Early Warning Systems Network (FEWS NET) funded by the United States Agency for International Development (USAID) has initiated a large-scale project to monitor small to medium surface water points in Africa. Under this project, multisource satellite data and hydrologic modeling techniques are integrated to monitor several hundreds of small to medium surface water points in Africa. This approach has been already tested to operationally monitor 41 water points in East Africa. The validation of modeled scaled depths with field-installed gauge data demonstrated the ability of the model to capture both the spatial patterns and seasonal variations. Modeled scaled estimates captured up to 60 % of the observed gauge variability with a mean root-mean-square error (RMSE) of 22 %. The data on relative water level, precipitation, and evapotranspiration (ETo) for water points in East and West Africa were modeled since 1998 and current information is being made available in near-real time. This chapter presents the approach, results from the East African study, and the first phase of expansion activities in the West Africa region. The water point monitoring network will be further expanded to cover much of sub-Saharan Africa. The goal of this study is to provide timely information on the water availability that would support already established FEWS NET activities in Africa. This chapter also presents the potential improvements in modeling approach to be implemented during future expansion in Africa.

  1. VitisNet: "Omics" integration through grapevine molecular networks.

    Directory of Open Access Journals (Sweden)

    Jérôme Grimplet

    Full Text Available BACKGROUND: Genomic data release for the grapevine has increased exponentially in the last five years. The Vitis vinifera genome has been sequenced and Vitis EST, transcriptomic, proteomic, and metabolomic tools and data sets continue to be developed. The next critical challenge is to provide biological meaning to this tremendous amount of data by annotating genes and integrating them within their biological context. We have developed and validated a system of Grapevine Molecular Networks (VitisNet. METHODOLOGY/PRINCIPAL FINDINGS: The sequences from the Vitis vinifera (cv. Pinot Noir PN40024 genome sequencing project and ESTs from the Vitis genus have been paired and the 39,424 resulting unique sequences have been manually annotated. Among these, 13,145 genes have been assigned to 219 networks. The pathway sets include 88 "Metabolic", 15 "Genetic Information Processing", 12 "Environmental Information Processing", 3 "Cellular Processes", 21 "Transport", and 80 "Transcription Factors". The quantitative data is loaded onto molecular networks, allowing the simultaneous visualization of changes in the transcriptome, proteome, and metabolome for a given experiment. CONCLUSIONS/SIGNIFICANCE: VitisNet uses manually annotated networks in SBML or XML format, enabling the integration of large datasets, streamlining biological functional processing, and improving the understanding of dynamic processes in systems biology experiments. VitisNet is grounded in the Vitis vinifera genome (currently at 8x coverage and can be readily updated with subsequent updates of the genome or biochemical discoveries. The molecular network files can be dynamically searched by pathway name or individual genes, proteins, or metabolites through the MetNet Pathway database and web-portal at http://metnet3.vrac.iastate.edu/. All VitisNet files including the manual annotation of the grape genome encompassing pathway names, individual genes, their genome identifier, and chromosome

  2. Characterization of phylogenetic networks with NetTest

    Directory of Open Access Journals (Sweden)

    Valiente Gabriel

    2010-05-01

    Full Text Available Abstract Background Typical evolutionary events like recombination, hybridization or gene transfer make necessary the use of phylogenetic networks to properly depict the evolution of DNA and protein sequences. Although several theoretical classes have been proposed to characterize these networks, they make stringent assumptions that will likely not be met by the evolutionary process. We have recently shown that the complexity of simulated networks is a function of the population recombination rate, and that at moderate and large recombination rates the resulting networks cannot be categorized. However, we do not know whether these results extend to networks estimated from real data. Results We introduce a web server for the categorization of explicit phylogenetic networks, including the most relevant theoretical classes developed so far. Using this tool, we analyzed statistical parsimony phylogenetic networks estimated from ~5,000 DNA alignments, obtained from the NCBI PopSet and Polymorphix databases. The level of characterization was correlated to nucleotide diversity, and a high proportion of the networks derived from these data sets could be formally characterized. Conclusions We have developed a public web server, NetTest (freely available from the software section at http://darwin.uvigo.es, to formally characterize the complexity of phylogenetic networks. Using NetTest we found that most statistical parsimony networks estimated with the program TCS could be assigned to a known network class. The level of network characterization was correlated to nucleotide diversity and dependent upon the intra/interspecific levels, although no significant differences were detected among genes. More research on the properties of phylogenetic networks is clearly needed.

  3. An Intuitive Dominant Test Algorithm of CP-nets Applied on Wireless Sensor Network

    Directory of Open Access Journals (Sweden)

    Liu Zhaowei

    2014-07-01

    Full Text Available A wireless sensor network is of spatially distributed with autonomous sensors, just like a multi-Agent system with single Agent. Conditional Preference networks is a qualitative tool for representing ceteris paribus (all other things being equal preference statements, it has been a research hotspot in artificial intelligence recently. But the algorithm and complexity of strong dominant test with respect to binary-valued structure CP-nets have not been solved, and few researchers address the application to other domain. In this paper, strong dominant test and application of CP-nets are studied in detail. Firstly, by constructing induced graph of CP-nets and studying its properties, we make a conclusion that the problem of strong dominant test on binary-valued CP-nets is single source shortest path problem essentially, so strong dominant test problem can be solved by improved Dijkstra’s algorithm. Secondly, we apply the algorithm above mentioned to the completeness of wireless sensor network, and design a completeness judging algorithm based on strong dominant test. Thirdly, we apply the algorithm on wireless sensor network to solve routing problem. In the end, we point out some interesting work in the future.

  4. Mars MetNet Mission - Martian Atmospheric Observational Post Network

    Science.gov (United States)

    Hari, Ari-Matti; Haukka, Harri; Aleksashkin, Sergey; Arruego, Ignacio; Schmidt, Walter; Genzer, Maria; Vazquez, Luis; Siikonen, Timo; Palin, Matti

    2017-04-01

    A new kind of planetary exploration mission for Mars is under development in collaboration between the Finnish Meteorological Institute (FMI), Lavochkin Association (LA), Space Research Institute (IKI) and Institutio Nacional de Tecnica Aerospacial (INTA). The Mars MetNet mission is based on a new semi-hard landing vehicle called MetNet Lander (MNL). The scientific payload of the Mars MetNet Precursor [1] mission is divided into three categories: Atmospheric instruments, Optical devices and Composition and structure devices. Each of the payload instruments will provide significant insights in to the Martian atmospheric behavior. The key technologies of the MetNet Lander have been qualified and the electrical qualification model (EQM) of the payload bay has been built and successfully tested. 1. MetNet Lander The MetNet landing vehicles are using an inflatable entry and descent system instead of rigid heat shields and parachutes as earlier semi-hard landing devices have used. This way the ratio of the payload mass to the overall mass is optimized. The landing impact will burrow the payload container into the Martian soil providing a more favorable thermal environment for the electronics and a suitable orientation of the telescopic boom with external sensors and the radio link antenna. It is planned to deploy several tens of MNLs on the Martian surface operating at least partly at the same time to allow meteorological network science. 2. Strawman Scientific Payload The strawman payload of the two MNL precursor models includes the following instruments: Atmospheric instruments: - MetBaro Pressure device - MetHumi Humidity device - MetTemp Temperature sensors Optical devices: - PanCam Panoramic - MetSIS Solar irradiance sensor with OWLS optical wireless system for data transfer - DS Dust sensor Composition and Structure Devices: Tri-axial magnetometer MOURA Tri-axial System Accelerometer The descent processes dynamic properties are monitored by a special 3-axis

  5. ShakeNet: a portable wireless sensor network for instrumenting large civil structures

    Science.gov (United States)

    Kohler, Monica D.; Hao, Shuai; Mishra, Nilesh; Govindan, Ramesh; Nigbor, Robert

    2015-08-03

    We report our findings from a U.S. Geological Survey (USGS) National Earthquake Hazards Reduction Program-funded project to develop and test a wireless, portable, strong-motion network of up to 40 triaxial accelerometers for structural health monitoring. The overall goal of the project was to record ambient vibrations for several days from USGS-instrumented structures. Structural health monitoring has important applications in fields like civil engineering and the study of earthquakes. The emergence of wireless sensor networks provides a promising means to such applications. However, while most wireless sensor networks are still in the experimentation stage, very few take into consideration the realistic earthquake engineering application requirements. To collect comprehensive data for structural health monitoring for civil engineers, high-resolution vibration sensors and sufficient sampling rates should be adopted, which makes it challenging for current wireless sensor network technology in the following ways: processing capabilities, storage limit, and communication bandwidth. The wireless sensor network has to meet expectations set by wired sensor devices prevalent in the structural health monitoring community. For this project, we built and tested an application-realistic, commercially based, portable, wireless sensor network called ShakeNet for instrumentation of large civil structures, especially for buildings, bridges, or dams after earthquakes. Two to three people can deploy ShakeNet sensors within hours after an earthquake to measure the structural response of the building or bridge during aftershocks. ShakeNet involved the development of a new sensing platform (ShakeBox) running a software suite for networking, data collection, and monitoring. Deployments reported here on a tall building and a large dam were real-world tests of ShakeNet operation, and helped to refine both hardware and software. 

  6. BrainNetCNN: Convolutional neural networks for brain networks; towards predicting neurodevelopment.

    Science.gov (United States)

    Kawahara, Jeremy; Brown, Colin J; Miller, Steven P; Booth, Brian G; Chau, Vann; Grunau, Ruth E; Zwicker, Jill G; Hamarneh, Ghassan

    2017-02-01

    We propose BrainNetCNN, a convolutional neural network (CNN) framework to predict clinical neurodevelopmental outcomes from brain networks. In contrast to the spatially local convolutions done in traditional image-based CNNs, our BrainNetCNN is composed of novel edge-to-edge, edge-to-node and node-to-graph convolutional filters that leverage the topological locality of structural brain networks. We apply the BrainNetCNN framework to predict cognitive and motor developmental outcome scores from structural brain networks of infants born preterm. Diffusion tensor images (DTI) of preterm infants, acquired between 27 and 46 weeks gestational age, were used to construct a dataset of structural brain connectivity networks. We first demonstrate the predictive capabilities of BrainNetCNN on synthetic phantom networks with simulated injury patterns and added noise. BrainNetCNN outperforms a fully connected neural-network with the same number of model parameters on both phantoms with focal and diffuse injury patterns. We then apply our method to the task of joint prediction of Bayley-III cognitive and motor scores, assessed at 18 months of age, adjusted for prematurity. We show that our BrainNetCNN framework outperforms a variety of other methods on the same data. Furthermore, BrainNetCNN is able to identify an infant's postmenstrual age to within about 2 weeks. Finally, we explore the high-level features learned by BrainNetCNN by visualizing the importance of each connection in the brain with respect to predicting the outcome scores. These findings are then discussed in the context of the anatomy and function of the developing preterm infant brain. Copyright © 2016 Elsevier Inc. All rights reserved.

  7. Biochemical Network Stochastic Simulator (BioNetS: software for stochastic modeling of biochemical networks

    Directory of Open Access Journals (Sweden)

    Elston Timothy C

    2004-03-01

    Full Text Available Abstract Background Intrinsic fluctuations due to the stochastic nature of biochemical reactions can have large effects on the response of biochemical networks. This is particularly true for pathways that involve transcriptional regulation, where generally there are two copies of each gene and the number of messenger RNA (mRNA molecules can be small. Therefore, there is a need for computational tools for developing and investigating stochastic models of biochemical networks. Results We have developed the software package Biochemical Network Stochastic Simulator (BioNetS for efficientlyand accurately simulating stochastic models of biochemical networks. BioNetS has a graphical user interface that allows models to be entered in a straightforward manner, and allows the user to specify the type of random variable (discrete or continuous for each chemical species in the network. The discrete variables are simulated using an efficient implementation of the Gillespie algorithm. For the continuous random variables, BioNetS constructs and numerically solvesthe appropriate chemical Langevin equations. The software package has been developed to scale efficiently with network size, thereby allowing large systems to be studied. BioNetS runs as a BioSpice agent and can be downloaded from http://www.biospice.org. BioNetS also can be run as a stand alone package. All the required files are accessible from http://x.amath.unc.edu/BioNetS. Conclusions We have developed BioNetS to be a reliable tool for studying the stochastic dynamics of large biochemical networks. Important features of BioNetS are its ability to handle hybrid models that consist of both continuous and discrete random variables and its ability to model cell growth and division. We have verified the accuracy and efficiency of the numerical methods by considering several test systems.

  8. Emulating Opportunistic Networks with KauNet Triggers

    Directory of Open Access Journals (Sweden)

    Brunstrom Anna

    2011-01-01

    Full Text Available In opportunistic networks, the availability of an end-to-end path is no longer required. Instead opportunistic networks may take advantage of temporary connectivity opportunities. Opportunistic networks present a demanding environment for network emulation as the traditional emulation setup, where application/transport endpoints only send and receive packets from the network following a black box approach, is no longer applicable. Opportunistic networking protocols and applications additionally need to react to the dynamics of the underlying network beyond what is conveyed through the exchange of packets. In order to support IP-level emulation evaluations of applications and protocols that react to lower layer events, we have proposed the use of emulation triggers. Emulation triggers can emulate arbitrary cross-layer feedback and can be synchronized with other emulation effects. After introducing the design and implementation of triggers in the KauNet emulator, we describe the integration of triggers with the DTN2 reference implementation and illustrate how the functionality can be used to emulate a classical DTN data-mule scenario.

  9. CellNet: network biology applied to stem cell engineering.

    Science.gov (United States)

    Cahan, Patrick; Li, Hu; Morris, Samantha A; Lummertz da Rocha, Edroaldo; Daley, George Q; Collins, James J

    2014-08-14

    Somatic cell reprogramming, directed differentiation of pluripotent stem cells, and direct conversions between differentiated cell lineages represent powerful approaches to engineer cells for research and regenerative medicine. We have developed CellNet, a network biology platform that more accurately assesses the fidelity of cellular engineering than existing methodologies and generates hypotheses for improving cell derivations. Analyzing expression data from 56 published reports, we found that cells derived via directed differentiation more closely resemble their in vivo counterparts than products of direct conversion, as reflected by the establishment of target cell-type gene regulatory networks (GRNs). Furthermore, we discovered that directly converted cells fail to adequately silence expression programs of the starting population and that the establishment of unintended GRNs is common to virtually every cellular engineering paradigm. CellNet provides a platform for quantifying how closely engineered cell populations resemble their target cell type and a rational strategy to guide enhanced cellular engineering. Copyright © 2014 Elsevier Inc. All rights reserved.

  10. SoilNet - A Zigbee based soil moisture sensor network

    Science.gov (United States)

    Bogena, H. R.; Weuthen, A.; Rosenbaum, U.; Huisman, J. A.; Vereecken, H.

    2007-12-01

    Soil moisture plays a key role in partitioning water and energy fluxes, in providing moisture to the atmosphere for precipitation, and controlling the pattern of groundwater recharge. Large-scale soil moisture variability is driven by variation of precipitation and radiation in space and time. At local scales, land cover, soil conditions, and topography act to redistribute soil moisture. Despite the importance of soil moisture, it is not yet measured in an operational way, e.g. for a better prediction of hydrological and surface energy fluxes (e.g. runoff, latent heat) at larger scales and in the framework of the development of early warning systems (e.g. flood forecasting) and the management of irrigation systems. The SoilNet project aims to develop a sensor network for the near real-time monitoring of soil moisture changes at high spatial and temporal resolution on the basis of the new low-cost ZigBee radio network that operates on top of the IEEE 802.15.4 standard. The sensor network consists of soil moisture sensors attached to end devices by cables, router devices and a coordinator device. The end devices are buried in the soil and linked wirelessly with nearby aboveground router devices. This ZigBee wireless sensor network design considers channel errors, delays, packet losses, and power and topology constraints. In order to conserve battery power, a reactive routing protocol is used that determines a new route only when it is required. The sensor network is also able to react to external influences, e.g. such as rainfall occurrences. The SoilNet communicator, routing and end devices have been developed by the Forschungszentrum Juelich and will be marketed through external companies. We will present first results of experiments to verify network stability and the accuracy of the soil moisture sensors. Simultaneously, we have developed a data management and visualisation system. We tested the wireless network on a 100 by 100 meter forest plot equipped with 25

  11. 75 FR 65363 - Basic Behavioral and Social Science Opportunity Network (OppNet)

    Science.gov (United States)

    2010-10-22

    ... HUMAN SERVICES National Institutes of Health Basic Behavioral and Social Science Opportunity Network... promote and publicize the Basic Behavioral and Social Science Opportunity Network (OppNet) initiative... Behavioral and Social Science Opportunity Network (OppNet) is a trans-NIH initiative to expand the agency's...

  12. The Radiometric Calibration Network (RadCalNet): a Global Calibration and Validation Test Site Network

    Science.gov (United States)

    Czapla-Myers, J.; Bouvet, M.; Wenny, B. N.

    2016-12-01

    The Radiometric Calibration Network (RadCalNet) Working Group (WG) consists of national and academic groups from various countries who are involved in the radiometric calibration and validation of Earth-observing sensors. The current WG is composed of members from France, Italy, the Netherlands, the UK, the USA, and China. RadCalNet has been on the agenda of the Committee on Earth Observation Satellites (CEOS) Working Group on Calibration and Validation (WGCV) for years, and in 2014 it was formally assembled. The primary goal is to develop an SI-traceable standardized network of sites and processing protocols for the absolute radiometric calibration, Intercalibration, and validation of Earth-observing sensors. Currently, RadCalNet is composed of four instrumented test sites that are located in the USA, France, Namibia, and China. A two-year prototyping phase was used to define the architecture of RadCalNet, demonstrate the operational concept using current satellite sensors, and to provide recommendations to CEOS WGCV for the transition of RadCalNet to an operational status. The final product is planned to be a daily hyperspectral (400-2500 nm) top-of-atmosphere reflectance in 30-minute intervals for a nadir-viewing sensor at each of the four test sites. The current schedule has RadCalNet becoming operational in late 2016 or early 2017.

  13. W. C. U. MicroNet: A State Network Linking Secondary Science and Math Classrooms.

    Science.gov (United States)

    Perry, Linda J.

    1984-01-01

    Western Carolina University (W.C.U.) MicroNet is designed to improve mathematics and science teaching by forming a support network for teachers. Describes: (1) the W. C. U. MicroNet system; (2) advantages of the network for students, teachers, and the university; (3) successes and problems; and (4) future endeavors. (JN)

  14. Crosstalk-aware virtual network embedding over inter-datacenter optical networks with few-mode fibers

    Science.gov (United States)

    Huang, Haibin; Guo, Bingli; Li, Xin; Yin, Shan; Zhou, Yu; Huang, Shanguo

    2017-12-01

    Virtualization of datacenter (DC) infrastructures enables infrastructure providers (InPs) to provide novel services like virtual networks (VNs). Furthermore, optical networks have been employed to connect the metro-scale geographically distributed DCs. The synergistic virtualization of the DC infrastructures and optical networks enables the efficient VN service over inter-DC optical networks (inter-DCONs). While the capacity of the used standard single-mode fiber (SSMF) is limited by their nonlinear characteristics. Thus, mode-division multiplexing (MDM) technology based on few-mode fibers (FMFs) could be employed to increase the capacity of optical networks. Whereas, modal crosstalk (XT) introduced by optical fibers and components deployed in the MDM optical networks impacts the performance of VN embedding (VNE) over inter-DCONs with FMFs. In this paper, we propose a XT-aware VNE mechanism over inter-DCONs with FMFs. The impact of XT is considered throughout the VNE procedures. The simulation results show that the proposed XT-aware VNE can achieves better performances of blocking probability and spectrum utilization compared to conventional VNE mechanisms.

  15. Few-body systems capture many-body physics: Tensor network approach

    Science.gov (United States)

    Ran, Shi-Ju; Piga, Angelo; Peng, Cheng; Su, Gang; Lewenstein, Maciej

    2017-10-01

    Due to the presence of strong correlations, theoretical or experimental investigations of quantum many-body systems belong to the most challenging tasks in modern physics. Stimulated by tensor networks, we propose a scheme of constructing the few-body models that can be easily accessed by theoretical or experimental means, to accurately capture the ground-state properties of infinite many-body systems in higher dimensions. The general idea is to embed a small bulk of the infinite model in an "entanglement bath" so that the many-body effects can be faithfully mimicked. The approach we propose is efficient, simple, flexible, sign-problem free, and it directly accesses the thermodynamic limit. The numerical results of the spin models on honeycomb and simple cubic lattices show that the ground-state properties including quantum phase transitions and the critical behaviors are accurately captured by only O (10 ) physical and bath sites. Moreover, since the few-body Hamiltonian only contains local interactions among a handful of sites, our work provides different ways of studying the many-body phenomena in the infinite strongly correlated systems by mimicking them in the few-body experiments using cold atoms/ions, or developing quantum devices by utilizing the many-body features.

  16. An Efficient Translation of Timed-Arc Petri Nets to Networks of Timed Automata

    DEFF Research Database (Denmark)

    Byg, Joakim; Jørgensen, Kenneth Yrke; Srba, Jiri

    2009-01-01

    to enforce urgency and with transport arcs to generalise the read-arcs. We also describe a novel translation from the extended timed-arc Petri net model to networks of timed automata. The translation is implemented in the tool TAPAAL and it uses UPPAAL as the verification engine. Our experiments confirm......Bounded timed-arc Petri nets with read-arcs were recently proven equivalent to networks of timed automata, though the Petri net model cannot express urgent behaviour and the described mutual trans- lations are rather inefficient. We propose an extension of timed-arc Petri nets with invariants...

  17. Development of Network Interface Cards for TRIDAQ systems with the NaNet framework

    Science.gov (United States)

    Ammendola, R.; Biagioni, A.; Cretaro, P.; Di Lorenzo, S.; Fiorini, M.; Frezza, O.; Lamanna, G.; Lo Cicero, F.; Lonardo, A.; Martinelli, M.; Neri, I.; Paolucci, P. S.; Pastorelli, E.; Piandani, R.; Pontisso, L.; Rossetti, D.; Simula, F.; Sozzi, M.; Valente, P.; Vicini, P.

    2017-03-01

    NaNet is a framework for the development of FPGA-based PCI Express (PCIe) Network Interface Cards (NICs) with real-time data transport architecture that can be effectively employed in TRIDAQ systems. Key features of the architecture are the flexibility in the configuration of the number and kind of the I/O channels, the hardware offloading of the network protocol stack, the stream processing capability, and the zero-copy CPU and GPU Remote Direct Memory Access (RDMA). Three NIC designs have been developed with the NaNet framework: NaNet-1 and NaNet-10 for the CERN NA62 low level trigger and NaNet3 for the KM3NeT-IT underwater neutrino telescope DAQ system. We will focus our description on the NaNet-10 design, as it is the most complete of the three in terms of capabilities and integrated IPs of the framework.

  18. Mars MetNet Mission - Martian Atmospheric Observational Post Network

    Science.gov (United States)

    Harri, A.-M.; Haukka, H.; Aleksashkin, S.; Arruego, I.; Schmidt, W.; Genzer, M.; Vazquez, L.; Siikonen, T.; Palin, M.

    2017-09-01

    A new kind of planetary exploration mission for Mars is under development in collaboration between the Finnish Meteorological Institute (FMI), Lavochkin Association (LA), Space Research Institute (IKI) and Institutio Nacional de Tecnica Aerospacial (INTA). The Mars MetNet mission is based on a new semi-hard landing vehicle called MetNet Lander (MNL). The scientific payload of the Mars MetNet Precursor [1] mission is divided into three categories: Atmospheric instruments, Optical devices and Composition and structure devices. Each of the payload instruments will provide significant insights in to the Martian atmospheric behavior. The key technologies of the MetNet Lander have been qualified and the electrical qualification model (EQM) of the payload bay has been built and successfully tested.

  19. NET: a new framework for the vectorization and examination of network data.

    Science.gov (United States)

    Lasser, Jana; Katifori, Eleni

    2017-01-01

    The analysis of complex networks both in general and in particular as pertaining to real biological systems has been the focus of intense scientific attention in the past and present. In this paper we introduce two tools that provide fast and efficient means for the processing and quantification of biological networks like Drosophila tracheoles or leaf venation patterns: the Network Extraction Tool (NET) to extract data and the Graph-edit-GUI (GeGUI) to visualize and modify networks. NET is especially designed for high-throughput semi-automated analysis of biological datasets containing digital images of networks. The framework starts with the segmentation of the image and then proceeds to vectorization using methodologies from optical character recognition. After a series of steps to clean and improve the quality of the extracted data the framework produces a graph in which the network is represented only by its nodes and neighborhood-relations. The final output contains information about the adjacency matrix of the graph, the width of the edges and the positions of the nodes in space. NET also provides tools for statistical analysis of the network properties, such as the number of nodes or total network length. Other, more complex metrics can be calculated by importing the vectorized network to specialized network analysis packages. GeGUI is designed to facilitate manual correction of non-planar networks as these may contain artifacts or spurious junctions due to branches crossing each other. It is tailored for but not limited to the processing of networks from microscopy images of Drosophila tracheoles. The networks extracted by NET closely approximate the network depicted in the original image. NET is fast, yields reproducible results and is able to capture the full geometry of the network, including curved branches. Additionally GeGUI allows easy handling and visualization of the networks.

  20. Science and Development Network (SciDev.net) - Phase IV | IDRC ...

    International Development Research Centre (IDRC) Digital Library (Canada)

    ... regional network strengthening, audience development, and monitoring and evaluation. This grant will support the implementation of SciDev.net's 2008-2012 Strategic Plan. The plan calls for SciDev.net to enhance its website platform, strengthen its language (specifically French) and alternative media content, and build ...

  1. Nordic network of meteorological services engaged in nuclear preparedness - NKS-MetNet

    Energy Technology Data Exchange (ETDEWEB)

    Persson, C.; Kolax, M. [Swedish Meteorological and Hydrological Institute, SHMI (Sweden); Baklanov, A.; Soerensen, Jens H. [Danish Meteorological Institute, DMI (Denmark); Sofiev, M.; Valkama, I. [Finnish Meteorological Institute, FMI (Finland); Karlsdottier, S. [Icelandic Meteorological Office, IMO (Ireland); Bartnicki, J.; Saltbones, J. [Norwegian Meteorological Institute, met.no (Norway)

    2007-03-15

    The current NKS-MetNet project was initiated to strengthen the Nordic collaboration within the field of real-time atmospheric transport modelling for nuclear emergency preparedness and to improve its contacts to the Nordic radiation protection authorities. A backup facility for the network has been established regarding exchange of operational real-time long-range dispersion model calculations. The facility consists of national password protected Web sites, at which some few basic results (maps) of atmospheric dispersion model calculations (forecasts) in emergency situations (or exercises) can be made available to the network. Technical problems at one institute will not influence the calculations or presentations from the other participants, which makes the system robust. The project has fulfilled its main harmonization goal by bringing the Nordic emergency modelling towards more unified approaches of the presentations of results and introduced a voluntary unification of the model output formats. It was left optional to upload raw data in a format enabling import into one of the Decision Support System (DSS) ARGOS or RODOS. However, implementation of either of these formats is feasible only in case of availability and utilization of the systems by the end-users in the specific country. Within the Nordic countries to-date most but not all of the models are capable of producing the ARGOS-compatible results. Another format of the output data supported by almost all MetNet participants is ENSEMBLE a standard developed within the scope of the EC ENSEMBLE project that currently continues on a voluntary basis, regulated by a joint MoU, and covers nearly all European emergency-engaged services. It seems to be feasible to keep the Nordic network of MetNet Web sites also in a near future and continue its development regardless of presence of a third-party large-scale DSS, whether it is ARGOS, RODOS, ENSEMBLE or any other. Foreseen future close cooperation of the

  2. anNET: a tool for network-embedded thermodynamic analysis of quantitative metabolome data

    Directory of Open Access Journals (Sweden)

    Zamboni Nicola

    2008-04-01

    Full Text Available Abstract Background Compared to other omics techniques, quantitative metabolomics is still at its infancy. Complex sample preparation and analytical procedures render exact quantification extremely difficult. Furthermore, not only the actual measurement but also the subsequent interpretation of quantitative metabolome data to obtain mechanistic insights is still lacking behind the current expectations. Recently, the method of network-embedded thermodynamic (NET analysis was introduced to address some of these open issues. Building upon principles of thermodynamics, this method allows for a quality check of measured metabolite concentrations and enables to spot metabolic reactions where active regulation potentially controls metabolic flux. So far, however, widespread application of NET analysis in metabolomics labs was hindered by the absence of suitable software. Results We have developed in Matlab a generalized software called 'anNET' that affords a user-friendly implementation of the NET analysis algorithm. anNET supports the analysis of any metabolic network for which a stoichiometric model can be compiled. The model size can span from a single reaction to a complete genome-wide network reconstruction including compartments. anNET can (i test quantitative data sets for thermodynamic consistency, (ii predict metabolite concentrations beyond the actually measured data, (iii identify putative sites of active regulation in the metabolic reaction network, and (iv help in localizing errors in data sets that were found to be thermodynamically infeasible. We demonstrate the application of anNET with three published Escherichia coli metabolome data sets. Conclusion Our user-friendly and generalized implementation of the NET analysis method in the software anNET allows users to rapidly integrate quantitative metabolome data obtained from virtually any organism. We envision that use of anNET in labs working on quantitative metabolomics will provide the

  3. MetNetAPI: A flexible method to access and manipulate biological network data from MetNet.

    Science.gov (United States)

    Sucaet, Yves; Wurtele, Eve Syrkin

    2010-11-18

    Convenient programmatic access to different biological databases allows automated integration of scientific knowledge. Many databases support a function to download files or data snapshots, or a webservice that offers "live" data. However, the functionality that a database offers cannot be represented in a static data download file, and webservices may consume considerable computational resources from the host server. MetNetAPI is a versatile Application Programming Interface (API) to the MetNetDB database. It abstracts, captures and retains operations away from a biological network repository and website. A range of database functions, previously only available online, can be immediately (and independently from the website) applied to a dataset of interest. Data is available in four layers: molecular entities, localized entities (linked to a specific organelle), interactions, and pathways. Navigation between these layers is intuitive (e.g. one can request the molecular entities in a pathway, as well as request in what pathways a specific entity participates). Data retrieval can be customized: Network objects allow the construction of new and integration of existing pathways and interactions, which can be uploaded back to our server. In contrast to webservices, the computational demand on the host server is limited to processing data-related queries only. An API provides several advantages to a systems biology software platform. MetNetAPI illustrates an interface with a central repository of data that represents the complex interrelationships of a metabolic and regulatory network. As an alternative to data-dumps and webservices, it allows access to a current and "live" database and exposes analytical functions to application developers. Yet it only requires limited resources on the server-side (thin server/fat client setup). The API is available for Java, Microsoft.NET and R programming environments and offers flexible query and broad data- retrieval methods. Data

  4. MetNetAPI: A flexible method to access and manipulate biological network data from MetNet

    Directory of Open Access Journals (Sweden)

    Sucaet Yves

    2010-11-01

    Full Text Available Abstract Background Convenient programmatic access to different biological databases allows automated integration of scientific knowledge. Many databases support a function to download files or data snapshots, or a webservice that offers "live" data. However, the functionality that a database offers cannot be represented in a static data download file, and webservices may consume considerable computational resources from the host server. Results MetNetAPI is a versatile Application Programming Interface (API to the MetNetDB database. It abstracts, captures and retains operations away from a biological network repository and website. A range of database functions, previously only available online, can be immediately (and independently from the website applied to a dataset of interest. Data is available in four layers: molecular entities, localized entities (linked to a specific organelle, interactions, and pathways. Navigation between these layers is intuitive (e.g. one can request the molecular entities in a pathway, as well as request in what pathways a specific entity participates. Data retrieval can be customized: Network objects allow the construction of new and integration of existing pathways and interactions, which can be uploaded back to our server. In contrast to webservices, the computational demand on the host server is limited to processing data-related queries only. Conclusions An API provides several advantages to a systems biology software platform. MetNetAPI illustrates an interface with a central repository of data that represents the complex interrelationships of a metabolic and regulatory network. As an alternative to data-dumps and webservices, it allows access to a current and "live" database and exposes analytical functions to application developers. Yet it only requires limited resources on the server-side (thin server/fat client setup. The API is available for Java, Microsoft.NET and R programming environments and offers

  5. The Design of NetSecLab: A Small Competition-Based Network Security Lab

    Science.gov (United States)

    Lee, C. P.; Uluagac, A. S.; Fairbanks, K. D.; Copeland, J. A.

    2011-01-01

    This paper describes a competition-style of exercise to teach system and network security and to reinforce themes taught in class. The exercise, called NetSecLab, is conducted on a closed network with student-formed teams, each with their own Linux system to defend and from which to launch attacks. Students are expected to learn how to: 1) install…

  6. NetRaVE: constructing dependency networks using sparse linear regression

    DEFF Research Database (Denmark)

    Phatak, A.; Kiiveri, H.; Clemmensen, Line Katrine Harder

    2010-01-01

    NetRaVE is a small suite of R functions for generating dependency networks using sparse regression methods. Such networks provide an alternative to interpreting 'top n lists' of genes arising out of an analysis of microarray data, and they provide a means of organizing and visualizing the resulting...... information in a manner that may suggest relationships between genes....

  7. An Expanded Study of Net Generation Perceptions on Privacy and Security on Social Networking Sites (SNS)

    Science.gov (United States)

    Lawler, James P.; Molluzzo, John C.; Doshi, Vijal

    2012-01-01

    Social networking on the Internet continues to be a frequent avenue of communication, especially among Net Generation consumers, giving benefits both personal and professional. The benefits may be eventually hindered by issues in information gathering and sharing on social networking sites. This study evaluates the perceptions of students taking a…

  8. Report of the Third Workshop on the Usage of NetFlow/IPFIX in Network Management

    NARCIS (Netherlands)

    Drago, Idilio; Sadre, R.; Pras, Aiko

    2011-01-01

    The Network Management Research Group (NMRG) organized in 2010 the Third Workshop on the Usage of NetFlow/IPFIX in Network Management, as part of the 78th IETF Meeting in Maastricht. Yearly organized since 2007, the workshop is an opportunity for people from both academia and industry to discuss the

  9. WCU MicroNet: Putting Purpose into the Network.

    Science.gov (United States)

    Beam, Bonnie J.

    1996-01-01

    WCU Micronet is a telecommunications network outreach program of Western Carolina University. What started as an aid to local high school science teachers has become a statewide K-12 multidisciplinary computer network with Internet listserv and Web capabilities. WCU Micronet also provides printed support and workshops for inservice and preservice…

  10. ISTA-Net: Iterative Shrinkage-Thresholding Algorithm Inspired Deep Network for Image Compressive Sensing

    KAUST Repository

    Zhang, Jian

    2017-06-24

    Traditional methods for image compressive sensing (CS) reconstruction solve a well-defined inverse problem that is based on a predefined CS model, which defines the underlying structure of the problem and is generally solved by employing convergent iterative solvers. These optimization-based CS methods face the challenge of choosing optimal transforms and tuning parameters in their solvers, while also suffering from high computational complexity in most cases. Recently, some deep network based CS algorithms have been proposed to improve CS reconstruction performance, while dramatically reducing time complexity as compared to optimization-based methods. Despite their impressive results, the proposed networks (either with fully-connected or repetitive convolutional layers) lack any structural diversity and they are trained as a black box, void of any insights from the CS domain. In this paper, we combine the merits of both types of CS methods: the structure insights of optimization-based method and the performance/speed of network-based ones. We propose a novel structured deep network, dubbed ISTA-Net, which is inspired by the Iterative Shrinkage-Thresholding Algorithm (ISTA) for optimizing a general $l_1$ norm CS reconstruction model. ISTA-Net essentially implements a truncated form of ISTA, where all ISTA-Net parameters are learned end-to-end to minimize a reconstruction error in training. Borrowing more insights from the optimization realm, we propose an accelerated version of ISTA-Net, dubbed FISTA-Net, which is inspired by the fast iterative shrinkage-thresholding algorithm (FISTA). Interestingly, this acceleration naturally leads to skip connections in the underlying network design. Extensive CS experiments demonstrate that the proposed ISTA-Net and FISTA-Net outperform existing optimization-based and network-based CS methods by large margins, while maintaining a fast runtime.

  11. MetNetGE: interactive views of biological networks and ontologies

    Directory of Open Access Journals (Sweden)

    Jia Ming

    2010-09-01

    Full Text Available Abstract Background Linking high-throughput experimental data with biological networks is a key step for understanding complex biological systems. Currently, visualization tools for large metabolic networks often result in a dense web of connections that is difficult to interpret biologically. The MetNetGE application organizes and visualizes biological networks in a meaningful way to improve performance and biological interpretability. Results MetNetGE is an interactive visualization tool based on the Google Earth platform. MetNetGE features novel visualization techniques for pathway and ontology information display. Instead of simply showing hundreds of pathways in a complex graph, MetNetGE gives an overview of the network using the hierarchical pathway ontology using a novel layout, called the Enhanced Radial Space-Filling (ERSF approach that allows the network to be summarized compactly. The non-tree edges in the pathway or gene ontology, which represent pathways or genes that belong to multiple categories, are linked using orbital connections in a third dimension. Biologists can easily identify highly activated pathways or gene ontology categories by mapping of summary experiment statistics such as coefficient of variation and overrepresentation values onto the visualization. After identifying such pathways, biologists can focus on the corresponding region to explore detailed pathway structure and experimental data in an aligned 3D tiered layout. In this paper, the use of MetNetGE is illustrated with pathway diagrams and data from E. coli and Arabidopsis. Conclusions MetNetGE is a visualization tool that organizes biological networks according to a hierarchical ontology structure. The ERSF technique assigns attributes in 3D space, such as color, height, and transparency, to any ontological structure. For hierarchical data, the novel ERSF layout enables the user to identify pathways or categories that are differentially regulated in

  12. MotifNet: a web-server for network motif analysis.

    Science.gov (United States)

    Smoly, Ilan Y; Lerman, Eugene; Ziv-Ukelson, Michal; Yeger-Lotem, Esti

    2017-06-15

    Network motifs are small topological patterns that recur in a network significantly more often than expected by chance. Their identification emerged as a powerful approach for uncovering the design principles underlying complex networks. However, available tools for network motif analysis typically require download and execution of computationally intensive software on a local computer. We present MotifNet, the first open-access web-server for network motif analysis. MotifNet allows researchers to analyze integrated networks, where nodes and edges may be labeled, and to search for motifs of up to eight nodes. The output motifs are presented graphically and the user can interactively filter them by their significance, number of instances, node and edge labels, and node identities, and view their instances. MotifNet also allows the user to distinguish between motifs that are centered on specific nodes and motifs that recur in distinct parts of the network. MotifNet is freely available at http://netbio.bgu.ac.il/motifnet . The website was implemented using ReactJs and supports all major browsers. The server interface was implemented in Python with data stored on a MySQL database. estiyl@bgu.ac.il or michaluz@cs.bgu.ac.il. Supplementary data are available at Bioinformatics online.

  13. 4th workshop on complex networks CompleNet 2013

    CERN Document Server

    Poncela-Casasnovas, Julia; Tolksdorf, Robert; Complex networks IV

    2013-01-01

    A network is a mathematical object consisting of a set of points (called vertices or nodes) that are connected to each other in some fashion by lines (called edges). Turns out this simple description corresponds to a bewildering array of systems in the real world, ranging from technological ones such as the Internet and World Wide Web, biological networks such as that of connections of the nervous systems or blood vessels, food webs, protein interactions, infrastructural systems such as networks of roads, airports or the power-grid, to patterns of social acquaintance such as friendship, network of Hollywood actors, connections between business houses and many more. Recent years have witnessed a substantial amount of interest within the scientific community in the properties of these networks. The emergence of the internet in particular, coupled with the widespread availability of inexpensive computing resources has facilitated studies ranging from large scale empirical analysis of networks in t...

  14. NetWall distributed firewall in the use of campus network

    Science.gov (United States)

    He, Junhua; Zhang, Pengshuai

    2011-10-01

    Internet provides a modern means of education but also non-mainstream consciousness and poor dissemination of information opens the door, network and moral issues have become prominent, poor dissemination of information and network spread rumors and negative effects of new problems, ideological and political education in schools had a huge impact, poses a severe challenge. This paper presents a distributed firewall will NetWall deployed in a campus network solution. The characteristics of the campus network, using technology to filter out bad information on the means of control, of sensitive information related to the record, establish a complete information security management platform for the campus network.

  15. High-Throughput Network Communication with NetIO

    CERN Document Server

    Schumacher, J\\"orn; The ATLAS collaboration; Vandelli, Wainer

    2016-01-01

    HPC network technologies like Infiniband, TrueScale or OmniPath provide low-latency and high-throughput communication between hosts, which makes them attractive options for data-acquisition systems in large-scale high-energy physics experiments. Like HPC networks, DAQ networks are local and include a well specified number of systems. Unfortunately traditional network communication APIs for HPC clusters like MPI or PGAS target exclusively the HPC community and are not suited well for DAQ applications. It is possible to build distributed DAQ applications using low-level system APIs like Infiniband Verbs (and this has been done), but it requires a non negligible effort and expert knowledge. On the other hand, message services like 0MQ have gained popularity in the HEP community. Such APIs allow to build distributed applications with a high-level approach and provide good performance. Unfortunately their usage usually limits developers to TCP/IP-based networks. While it is possible to operate a TCP/IP stack on to...

  16. BicNET: Flexible module discovery in large-scale biological networks using biclustering.

    Science.gov (United States)

    Henriques, Rui; Madeira, Sara C

    2016-01-01

    Despite the recognized importance of module discovery in biological networks to enhance our understanding of complex biological systems, existing methods generally suffer from two major drawbacks. First, there is a focus on modules where biological entities are strongly connected, leading to the discovery of trivial/well-known modules and to the inaccurate exclusion of biological entities with subtler yet relevant roles. Second, there is a generalized intolerance towards different forms of noise, including uncertainty associated with less-studied biological entities (in the context of literature-driven networks) and experimental noise (in the context of data-driven networks). Although state-of-the-art biclustering algorithms are able to discover modules with varying coherency and robustness to noise, their application for the discovery of non-dense modules in biological networks has been poorly explored and it is further challenged by efficiency bottlenecks. This work proposes Biclustering NETworks (BicNET), a biclustering algorithm to discover non-trivial yet coherent modules in weighted biological networks with heightened efficiency. Three major contributions are provided. First, we motivate the relevance of discovering network modules given by constant, symmetric, plaid and order-preserving biclustering models. Second, we propose an algorithm to discover these modules and to robustly handle noisy and missing interactions. Finally, we provide new searches to tackle time and memory bottlenecks by effectively exploring the inherent structural sparsity of network data. Results in synthetic network data confirm the soundness, efficiency and superiority of BicNET. The application of BicNET on protein interaction and gene interaction networks from yeast, E. coli and Human reveals new modules with heightened biological significance. BicNET is, to our knowledge, the first method enabling the efficient unsupervised analysis of large-scale network data for the discovery of

  17. CoryneRegNet 4.0 – A reference database for corynebacterial gene regulatory networks

    Directory of Open Access Journals (Sweden)

    Baumbach Jan

    2007-11-01

    Full Text Available Abstract Background Detailed information on DNA-binding transcription factors (the key players in the regulation of gene expression and on transcriptional regulatory interactions of microorganisms deduced from literature-derived knowledge, computer predictions and global DNA microarray hybridization experiments, has opened the way for the genome-wide analysis of transcriptional regulatory networks. The large-scale reconstruction of these networks allows the in silico analysis of cell behavior in response to changing environmental conditions. We previously published CoryneRegNet, an ontology-based data warehouse of corynebacterial transcription factors and regulatory networks. Initially, it was designed to provide methods for the analysis and visualization of the gene regulatory network of Corynebacterium glutamicum. Results Now we introduce CoryneRegNet release 4.0, which integrates data on the gene regulatory networks of 4 corynebacteria, 2 mycobacteria and the model organism Escherichia coli K12. As the previous versions, CoryneRegNet provides a web-based user interface to access the database content, to allow various queries, and to support the reconstruction, analysis and visualization of regulatory networks at different hierarchical levels. In this article, we present the further improved database content of CoryneRegNet along with novel analysis features. The network visualization feature GraphVis now allows the inter-species comparisons of reconstructed gene regulatory networks and the projection of gene expression levels onto that networks. Therefore, we added stimulon data directly into the database, but also provide Web Service access to the DNA microarray analysis platform EMMA. Additionally, CoryneRegNet now provides a SOAP based Web Service server, which can easily be consumed by other bioinformatics software systems. Stimulons (imported from the database, or uploaded by the user can be analyzed in the context of known

  18. CoryneRegNet 4.0 - A reference database for corynebacterial gene regulatory networks.

    Science.gov (United States)

    Baumbach, Jan

    2007-11-06

    Detailed information on DNA-binding transcription factors (the key players in the regulation of gene expression) and on transcriptional regulatory interactions of microorganisms deduced from literature-derived knowledge, computer predictions and global DNA microarray hybridization experiments, has opened the way for the genome-wide analysis of transcriptional regulatory networks. The large-scale reconstruction of these networks allows the in silico analysis of cell behavior in response to changing environmental conditions. We previously published CoryneRegNet, an ontology-based data warehouse of corynebacterial transcription factors and regulatory networks. Initially, it was designed to provide methods for the analysis and visualization of the gene regulatory network of Corynebacterium glutamicum. Now we introduce CoryneRegNet release 4.0, which integrates data on the gene regulatory networks of 4 corynebacteria, 2 mycobacteria and the model organism Escherichia coli K12. As the previous versions, CoryneRegNet provides a web-based user interface to access the database content, to allow various queries, and to support the reconstruction, analysis and visualization of regulatory networks at different hierarchical levels. In this article, we present the further improved database content of CoryneRegNet along with novel analysis features. The network visualization feature GraphVis now allows the inter-species comparisons of reconstructed gene regulatory networks and the projection of gene expression levels onto that networks. Therefore, we added stimulon data directly into the database, but also provide Web Service access to the DNA microarray analysis platform EMMA. Additionally, CoryneRegNet now provides a SOAP based Web Service server, which can easily be consumed by other bioinformatics software systems. Stimulons (imported from the database, or uploaded by the user) can be analyzed in the context of known transcriptional regulatory networks to predict putative

  19. Network computing with Einstein@home and climateprediction.net

    CERN Multimedia

    CERN. Geneva; Christensen, Carl; Massey, Neil; Aina, Tolu; Marquina, Miguel Angel

    2005-01-01

    Einstein@Home is a project developed to search data from the Laser Interferometer Gravitational wave Observatory (LIGO) in the US and from the GEO 600 gravitational wave observatory in Germany for signals coming from extremely dense, rapidly rotating stars. Such sources are believed to be either quark stars or neutron stars, and a subclass of these are already observed by conventional means as pulsars or X-ray emitting celestial objects. Einstein@home is an official project of the Year of Physics. 2. climateprediction.net aims to investigate the approximations that have to be made in state-of-the-art climate models by running such models thousands of times under a range of approximations. This will help understand how sensitive different models are to small changes in, for example, the carbon dioxide and the sulphur cycle. This will contribute to exploring how climate may change in the next century under a wide range of different scenarios.

  20. CGBayesNets: conditional Gaussian Bayesian network learning and inference with mixed discrete and continuous data.

    Directory of Open Access Journals (Sweden)

    Michael J McGeachie

    2014-06-01

    Full Text Available Bayesian Networks (BN have been a popular predictive modeling formalism in bioinformatics, but their application in modern genomics has been slowed by an inability to cleanly handle domains with mixed discrete and continuous variables. Existing free BN software packages either discretize continuous variables, which can lead to information loss, or do not include inference routines, which makes prediction with the BN impossible. We present CGBayesNets, a BN package focused around prediction of a clinical phenotype from mixed discrete and continuous variables, which fills these gaps. CGBayesNets implements Bayesian likelihood and inference algorithms for the conditional Gaussian Bayesian network (CGBNs formalism, one appropriate for predicting an outcome of interest from, e.g., multimodal genomic data. We provide four different network learning algorithms, each making a different tradeoff between computational cost and network likelihood. CGBayesNets provides a full suite of functions for model exploration and verification, including cross validation, bootstrapping, and AUC manipulation. We highlight several results obtained previously with CGBayesNets, including predictive models of wood properties from tree genomics, leukemia subtype classification from mixed genomic data, and robust prediction of intensive care unit mortality outcomes from metabolomic profiles. We also provide detailed example analysis on public metabolomic and gene expression datasets. CGBayesNets is implemented in MATLAB and available as MATLAB source code, under an Open Source license and anonymous download at http://www.cgbayesnets.com.

  1. Network topology reveals high connectance levels and few key microbial genera within soils

    NARCIS (Netherlands)

    Lupatini, M.; Suleiman, A.; Jacques, R.; Antoniolli, Z.; de Siqueira Ferreira, A.; Kuramae, E.E.; Roesch, L.

    2014-01-01

    Microbes have a central role in soil global biogeochemical process, yet specific microbe–microbe relationships are largely unknown. Analytical approaches as network analysis may shed new lights in understanding of microbial ecology and environmental microbiology. We investigated the soil bacterial

  2. SeaDataNet network services monitoring: Definition and Implementation of Service availability index

    Science.gov (United States)

    Lykiardopoulos, Angelos; Mpalopoulou, Stavroula; Vavilis, Panagiotis; Pantazi, Maria; Iona, Sissy

    2014-05-01

    SeaDataNet (SDN) is a standardized system for managing large and diverse data sets collected by the oceanographic fleets and the automatic observation systems. The SeaDataNet network is constituted of national oceanographic data centres of 35 countries, active in data collection. SeaDataNetII project's objective is to upgrade the present SeaDataNet infrastructure into an operationally robust and state-of-the-art infrastructure; therefore Network Monitoring is a step to this direction. The term Network Monitoring describes the use of system that constantly monitors a computer network for slow or failing components and that notifies the network administrator in case of outages. Network monitoring is crucial when implementing widely distributed systems over the Internet and in real-time systems as it detects malfunctions that may occur and notifies the system administrator who can immediately respond and correct the problem. In the framework of SeaDataNet II project a monitoring system was developed in order to monitor the SeaDataNet components. The core system is based on Nagios software. Some plug-ins were developed to support SeaDataNet modules. On the top of Nagios Engine a web portal was developed in order to give access to local administrators of SeaDataNet components, to view detailed logs of their own service(s). Currently the system monitors 35 SeaDataNet Download Managers, 9 SeaDataNet Services, 25 GeoSeas Download Managers and 23 UBSS Download Managers . Taking advantage of the continuous monitoring of SeaDataNet system components a total availability index will be implemented. The term availability can be defined as the ability of a functional unit to be in a state to perform a required function under given conditions at a given instant of time or over a given time interval, assuming that the required external resources are provided. Availability measures can be considered as a are very important benefit becauseT - The availability trends that can be

  3. WaterNet: The NASA water cycle solutions network - Danubian regional applications

    Science.gov (United States)

    Matthews, Dave; Brilly, Mitja; Kobold, Mira; Zagar, Mark; Houser, Paul

    2008-11-01

    WaterNet is a new international network of researchers, stakeholders, and end-users of remote sensing tools that will benefit the water resources management community. This paper provides an overview and it discusses the concept of solutions networks focusing on the WaterNet. It invites Danubian research and applications teams to join our WaterNet network. The NASA Water cycle Solutions Network's goal is to improve and optimize the sustained ability of water cycle researchers, stakeholders, organizations and networks to interact, identify, harness, and extend NASA research results to augment decision support tools and meet national needs. Our team will develop WaterNet by engaging relevant NASA water cycle research resources and community-of-practice organizations, to develop what we term an "actionable database" that can be used to communicate and connect NASA Water cycle research Results (NWRs) towards the improvement of water-related Decision Support Tools (DSTs). Recognizing that the European Commission and European Space Agency have also developed many related Water Research products (EWRs), we seek to learn about these and network with the EU teams to include their information in the WaterNet actionable data base and Community of Practice. WaterNet will then develop strategies to connect researchers and decision-makers via innovative communication strategies, improved user access to NASA and EU - Danubian resources, improved water cycle research community appreciation for user requirements, improved policymaker, management and stakeholder knowledge of research and application products, and improved identification of pathways for progress. Finally, WaterNet will develop relevant benchmarking and metrics, to understand the network's characteristics, to optimize its performance, and to establish sustainability. This paper provides examples of several NASA products based on remote sensing and land data assimilation systems that integrate remotely sensed and in

  4. WaterNet: The NASA water cycle solutions network - Danubian regional applications

    Energy Technology Data Exchange (ETDEWEB)

    Matthews, Dave [Hydromet DSS, LLC, Silverthorne, CO 80498-1848 (United States); Brilly, Mitja [FGG University of Ljubljana (Slovenia); Kobold, Mira; Zagar, Mark [Environmental Agency of the Republic of Slovenia, Ljubljana (Slovenia); Houser, Paul [Center for Research on Environment and Water and George Mason University, Calverton, MD 20705 (United States)], E-mail: hydrometdss@comcast.net

    2008-11-01

    WaterNet is a new international network of researchers, stakeholders, and end-users of remote sensing tools that will benefit the water resources management community. This paper provides an overview and it discusses the concept of solutions networks focusing on the WaterNet. It invites Danubian research and applications teams to join our WaterNet network. The NASA Water cycle Solutions Network's goal is to improve and optimize the sustained ability of water cycle researchers, stakeholders, organizations and networks to interact, identify, harness, and extend NASA research results to augment decision support tools and meet national needs. Our team will develop WaterNet by engaging relevant NASA water cycle research resources and community-of-practice organizations, to develop what we term an 'actionable database' that can be used to communicate and connect NASA Water cycle research Results (NWRs) towards the improvement of water-related Decision Support Tools (DSTs). Recognizing that the European Commission and European Space Agency have also developed many related Water Research products (EWRs), we seek to learn about these and network with the EU teams to include their information in the WaterNet actionable data base and Community of Practice. WaterNet will then develop strategies to connect researchers and decision-makers via innovative communication strategies, improved user access to NASA and EU - Danubian resources, improved water cycle research community appreciation for user requirements, improved policymaker, management and stakeholder knowledge of research and application products, and improved identification of pathways for progress. Finally, WaterNet will develop relevant benchmarking and metrics, to understand the network's characteristics, to optimize its performance, and to establish sustainability. This paper provides examples of several NASA products based on remote sensing and land data assimilation systems that integrate

  5. Effect of network topology on the evolutionary ultimatum game based on the net-profit decision

    Science.gov (United States)

    Ye, Shun-Qiang; Wang, Lu; Jones, Michael C.; Ye, Ye; Wang, Meng; Xie, Neng-Gang

    2016-04-01

    The ubiquity of altruist behavior amongst humans has long been a significant puzzle in the social sciences. Ultimatum game has proved to be a useful tool for explaining altruistic behavior among selfish individuals. In an ultimatum game where alternating roles exist, we suppose that players make their decisions based on the net profit of their own. In this paper, we specify a player's strategy with two parameters: offer level α ∈ [ 0,1) and net profit acceptance level β ∈ [ - 1,1). By Monte Carlo simulation, we analyze separately the effect of the size of the neighborhood, the small-world property and the heterogeneity of the degree distributions of the networks. Results show that compared with results observed for homogeneous networks, heterogeneous networks lead to more rational outcomes. Moreover, network structure has no effect on the evolution of kindness level, so moderate kindness is adaptable to any social groups and organizations.

  6. xiNET: Cross-link Network Maps With Residue Resolution*

    Science.gov (United States)

    Combe, Colin W.; Fischer, Lutz; Rappsilber, Juri

    2015-01-01

    xiNET is a visualization tool for exploring cross-linking/mass spectrometry results. The interactive maps of the cross-link network that it generates are a type of node-link diagram. In these maps xiNET displays: (1) residue resolution positional information including linkage sites and linked peptides; (2) all types of cross-linking reaction product; (3) ambiguous results; and, (4) additional sequence information such as domains. xiNET runs in a browser and exports vector graphics which can be edited in common drawing packages to create publication quality figures. Availability: xiNET is open source, released under the Apache version 2 license. Results can be viewed by uploading data to http://crosslinkviewer.org/ or by downloading the software from http://github.com/colin-combe/crosslink-viewer and running it locally. PMID:25648531

  7. xiNET: cross-link network maps with residue resolution.

    Science.gov (United States)

    Combe, Colin W; Fischer, Lutz; Rappsilber, Juri

    2015-04-01

    xiNET is a visualization tool for exploring cross-linking/mass spectrometry results. The interactive maps of the cross-link network that it generates are a type of node-link diagram. In these maps xiNET displays: (1) residue resolution positional information including linkage sites and linked peptides; (2) all types of cross-linking reaction product; (3) ambiguous results; and, (4) additional sequence information such as domains. xiNET runs in a browser and exports vector graphics which can be edited in common drawing packages to create publication quality figures. xiNET is open source, released under the Apache version 2 license. Results can be viewed by uploading data to http://crosslinkviewer.org/ or by downloading the software from http://github.com/colin-combe/crosslink-viewer and running it locally. © 2015 by The American Society for Biochemistry and Molecular Biology, Inc.

  8. NIRFaceNet: A Convolutional Neural Network for Near-Infrared Face Identification

    Directory of Open Access Journals (Sweden)

    Min Peng

    2016-10-01

    Full Text Available Near-infrared (NIR face recognition has attracted increasing attention because of its advantage of illumination invariance. However, traditional face recognition methods based on NIR are designed for and tested in cooperative-user applications. In this paper, we present a convolutional neural network (CNN for NIR face recognition (specifically face identification in non-cooperative-user applications. The proposed NIRFaceNet is modified from GoogLeNet, but has a more compact structure designed specifically for the Chinese Academy of Sciences Institute of Automation (CASIA NIR database and can achieve higher identification rates with less training time and less processing time. The experimental results demonstrate that NIRFaceNet has an overall advantage compared to other methods in the NIR face recognition domain when image blur and noise are present. The performance suggests that the proposed NIRFaceNet method may be more suitable for non-cooperative-user applications.

  9. ChromNet: Learning the human chromatin network from all ENCODE ChIP-seq data.

    Science.gov (United States)

    Lundberg, Scott M; Tu, William B; Raught, Brian; Penn, Linda Z; Hoffman, Michael M; Lee, Su-In

    2016-04-30

    A cell's epigenome arises from interactions among regulatory factors-transcription factors and histone modifications-co-localized at particular genomic regions. We developed a novel statistical method, ChromNet, to infer a network of these interactions, the chromatin network, by inferring conditional-dependence relationships among a large number of ChIP-seq data sets. We applied ChromNet to all available 1451 ChIP-seq data sets from the ENCODE Project, and showed that ChromNet revealed previously known physical interactions better than alternative approaches. We experimentally validated one of the previously unreported interactions, MYC-HCFC1. An interactive visualization tool is available at http://chromnet.cs.washington.edu.

  10. The 11th Annual Mediterranean Ad Hoc Networking Workshop (Med-Hoc-Net 2012 )

    NARCIS (Netherlands)

    Pitsillides, A.; Douligeris, C.; Vassiliou, V.; Heijenk, Geert; Cavalcante de Oliveira, J.

    Message from the General Chairs Welcome to the 2012 Mediterranean Ad Hoc Networking Workshop in Ayia Napa, Cyprus. We are excited to host Med-Hoc-Net. As a major annual international workshop, following recent successful workshops in Sicily (2006), Corfu (2007), Palma de Mallorca (2008), Haifa

  11. Integration of Systems Network (SysNet) tools for regional land use scenario analysis in Asia

    NARCIS (Netherlands)

    Roetter, R.P.; Hoanh, C.T.; Laborte, A.G.; Keulen, van H.; Ittersum, van M.K.; Dreiser, C.; Diepen, van C.A.; Ridder, de N.; Laar, van H.H.

    2005-01-01

    This paper introduces the approach of the Systems research Network (SysNet) for land use planning in tropical Asia with a focus on its main scientific-technical output: the development of the land use planning and analysis system (LUPAS) and its component models. These include crop simulation

  12. ChemNet: A Transferable and Generalizable Deep Neural Network for Small-Molecule Property Prediction

    Energy Technology Data Exchange (ETDEWEB)

    Goh, Garrett B.; Siegel, Charles M.; Vishnu, Abhinav; Hodas, Nathan O.

    2017-12-08

    With access to large datasets, deep neural networks through representation learning have been able to identify patterns from raw data, achieving human-level accuracy in image and speech recognition tasks. However, in chemistry, availability of large standardized and labelled datasets is scarce, and with a multitude of chemical properties of interest, chemical data is inherently small and fragmented. In this work, we explore transfer learning techniques in conjunction with the existing Chemception CNN model, to create a transferable and generalizable deep neural network for small-molecule property prediction. Our latest model, ChemNet learns in a semi-supervised manner from inexpensive labels computed from the ChEMBL database. When fine-tuned to the Tox21, HIV and FreeSolv dataset, which are 3 separate chemical tasks that ChemNet was not originally trained on, we demonstrate that ChemNet exceeds the performance of existing Chemception models, contemporary MLP models that trains on molecular fingerprints, and it matches the performance of the ConvGraph algorithm, the current state-of-the-art. Furthermore, as ChemNet has been pre-trained on a large diverse chemical database, it can be used as a universal “plug-and-play” deep neural network, which accelerates the deployment of deep neural networks for the prediction of novel small-molecule chemical properties.

  13. The 11th Annual Mediterranean Ad Hoc Networking Workshop (Med-Hoc-Net 2012)

    NARCIS (Netherlands)

    Pitsillides, A.; Douligeris, C.; Vassiliou, V.; Heijenk, Geert; Cavalcante de Oliveira, J.

    Message from the General Chairs Welcome to the 2012 Mediterranean Ad Hoc Networking Workshop in Ayia Napa, Cyprus. We are excited to host Med-Hoc-Net. As a major annual international workshop, following recent successful workshops in Sicily (2006), Corfu (2007), Palma de Mallorca (2008), Haifa

  14. Threshold based AntNet algorithm for dynamic traffic routing of road networks

    Directory of Open Access Journals (Sweden)

    Ayman M. Ghazy

    2012-07-01

    Full Text Available Dynamic routing algorithms play an important role in road traffic routing to avoid congestion and to direct vehicles to better routes. AntNet routing algorithms have been applied, extensively and successfully, in data communication network. However, its application for dynamic routing on road networks is still considerably limited. This paper presents a modified version of the AntNet routing algorithm, called “Threshold based AntNet”, that has the ability to efficiently utilize a priori information of dynamic traffic routing, especially, for road networks. The modification exploits the practical and pre-known information for most road traffic networks, namely, the good travel times between sources and destinations. The values of those good travel times are manipulated as threshold values. This approach has proven to conserve tracking of good routes. According to the dynamic nature of the problem, the presented approach guards the agility of rediscovering a good route. Attaining the thresholds (good reported travel times, of a given source to destination route, permits for a better utilization of the computational resources, that, leads to better accommodation for the network changes. The presented algorithm introduces a new type of ants called “check ants”. It assists in preserving good routes and, better yet, exposes and discards the degraded ones. The threshold AntNet algorithm presents a new strategy for updating the routing information, supported by the backward ants.

  15. RhizoRegNet--a database of rhizobial transcription factors and regulatory networks.

    Science.gov (United States)

    Krol, Elizaveta; Blom, Jochen; Winnebald, Jörn; Berhörster, Alexander; Barnett, Melanie J; Goesmann, Alexander; Baumbach, Jan; Becker, Anke

    2011-08-20

    Sinorhizobium meliloti is a symbiotic soil bacterium that forms nitrogen-fixing nodules on roots of leguminous plants, including Medicago truncatula (barrel medic), and M. sativa (alfalfa). The Sinorhizobium-Medicago symbiosis is an important symbiosis model system. Knowledge gained from this system can be extended to other agriculturally important "rhizobial" symbioses. Since the publication of the S. meliloti genome in 2001, many new genetic, biochemical and physiological data have been generated. Effective methods to organize, store, and mine this postgenome data are crucial for continued success of the S. meliloti model system. In 2009, we introduced a portal for rhizobial genomes, RhizoGATE (Becker et al., J. Biotechnol. 140, 45-50). The RhizoGATE portal combines continuously updated S. meliloti genome annotation with postgenome data resources. Here we report integration of a new component, RhizoRegNet, to RhizoGATE. RhizoRegNet combines transcriptome data and operon predictions with published data on regulatory interactions. By allowing searching and visualisation of complex transcriptional regulatory networks, RhizoRegNet advances our understanding of transcriptional regulation in S. meliloti. The current version of RhizoRegNet is divided into 13 functional modules containing information for 114 regulators, 475 regulated genes, and 178 transcription factor binding motifs. In this report, we provide an example of how RhizoRegNet facilitates visualisation and analysis of the regulatory network for exopolysaccharide biosynthesis and motility. Presently, RhizoRegNet contains regulatory network information for S. meliloti and the closely related bacterium, S. medicae, but can be expanded to include other rhizobial species. Copyright © 2010 Elsevier B.V. All rights reserved.

  16. E3Net: a system for exploring E3-mediated regulatory networks of cellular functions.

    Science.gov (United States)

    Han, Youngwoong; Lee, Hodong; Park, Jong C; Yi, Gwan-Su

    2012-04-01

    Ubiquitin-protein ligase (E3) is a key enzyme targeting specific substrates in diverse cellular processes for ubiquitination and degradation. The existing findings of substrate specificity of E3 are, however, scattered over a number of resources, making it difficult to study them together with an integrative view. Here we present E3Net, a web-based system that provides a comprehensive collection of available E3-substrate specificities and a systematic framework for the analysis of E3-mediated regulatory networks of diverse cellular functions. Currently, E3Net contains 2201 E3s and 4896 substrates in 427 organisms and 1671 E3-substrate specific relations between 493 E3s and 1277 substrates in 42 organisms, extracted mainly from MEDLINE abstracts and UniProt comments with an automatic text mining method and additional manual inspection and partly from high throughput experiment data and public ubiquitination databases. The significant functions and pathways of the extracted E3-specific substrate groups were identified from a functional enrichment analysis with 12 functional category resources for molecular functions, protein families, protein complexes, pathways, cellular processes, cellular localization, and diseases. E3Net includes interactive analysis and navigation tools that make it possible to build an integrative view of E3-substrate networks and their correlated functions with graphical illustrations and summarized descriptions. As a result, E3Net provides a comprehensive resource of E3s, substrates, and their functional implications summarized from the regulatory network structures of E3-specific substrate groups and their correlated functions. This resource will facilitate further in-depth investigation of ubiquitination-dependent regulatory mechanisms. E3Net is freely available online at http://pnet.kaist.ac.kr/e3net.

  17. E3Net: A System for Exploring E3-mediated Regulatory Networks of Cellular Functions*

    Science.gov (United States)

    Han, Youngwoong; Lee, Hodong; Park, Jong C.; Yi, Gwan-Su

    2012-01-01

    Ubiquitin-protein ligase (E3) is a key enzyme targeting specific substrates in diverse cellular processes for ubiquitination and degradation. The existing findings of substrate specificity of E3 are, however, scattered over a number of resources, making it difficult to study them together with an integrative view. Here we present E3Net, a web-based system that provides a comprehensive collection of available E3-substrate specificities and a systematic framework for the analysis of E3-mediated regulatory networks of diverse cellular functions. Currently, E3Net contains 2201 E3s and 4896 substrates in 427 organisms and 1671 E3-substrate specific relations between 493 E3s and 1277 substrates in 42 organisms, extracted mainly from MEDLINE abstracts and UniProt comments with an automatic text mining method and additional manual inspection and partly from high throughput experiment data and public ubiquitination databases. The significant functions and pathways of the extracted E3-specific substrate groups were identified from a functional enrichment analysis with 12 functional category resources for molecular functions, protein families, protein complexes, pathways, cellular processes, cellular localization, and diseases. E3Net includes interactive analysis and navigation tools that make it possible to build an integrative view of E3-substrate networks and their correlated functions with graphical illustrations and summarized descriptions. As a result, E3Net provides a comprehensive resource of E3s, substrates, and their functional implications summarized from the regulatory network structures of E3-specific substrate groups and their correlated functions. This resource will facilitate further in-depth investigation of ubiquitination-dependent regulatory mechanisms. E3Net is freely available online at http://pnet.kaist.ac.kr/e3net. PMID:22199232

  18. ezBioNet: A modeling and simulation system for analyzing biological reaction networks

    Science.gov (United States)

    Yu, Seok Jong; Tung, Thai Quang; Park, Junho; Lim, Jongtae; Yoo, Jaesoo

    2012-10-01

    To achieve robustness against living environments, a living organism is composed of complicated regulatory mechanisms ranging from gene regulations to signal transduction. If such life phenomena are to be understand, an integrated analysis tool that should have modeling and simulation functions for biological reactions, as well as new experimental methods for measuring biological phenomena, is fundamentally required. We have designed and implemented modeling and simulation software (ezBioNet) for analyzing biological reaction networks. The software can simultaneously perform an integrated modeling of various responses occurring in cells, ranging from gene expressions to signaling processes. To support massive analysis of biological networks, we have constructed a server-side simulation system (VCellSim) that can perform ordinary differential equations (ODE) analysis, sensitivity analysis, and parameter estimates. ezBioNet integrates the BioModel database by connecting the european bioinformatics institute (EBI) servers through Web services APIs and supports the handling of systems biology markup language (SBML) files. In addition, we employed eclipse RCP (rich client platform) which is a powerful modularity framework allowing various functional expansions. ezBioNet is intended to be an easy-to-use modeling tool, as well as a simulation system, to understand the control mechanism by monitoring the change of each component in a biological network. A researcher may perform the kinetic modeling and execute the simulation. The simulation result can be managed and visualized on ezBioNet, which is freely available at http://ezbionet.cbnu.ac.kr.

  19. PollyNET: a global network of automated Raman-polarization lidars for continuous aerosol profiling

    Science.gov (United States)

    Baars, H.; Kanitz, T.; Engelmann, R.; Althausen, D.; Heese, B.; Komppula, M.; Preißler, J.; Tesche, M.; Ansmann, A.; Wandinger, U.; Lim, J.-H.; Ahn, J. Y.; Stachlewska, I. S.; Amiridis, V.; Marinou, E.; Seifert, P.; Hofer, J.; Skupin, A.; Schneider, F.; Bohlmann, S.; Foth, A.; Bley, S.; Pfüller, A.; Giannakaki, E.; Lihavainen, H.; Viisanen, Y.; Hooda, R. K.; Pereira, S.; Bortoli, D.; Wagner, F.; Mattis, I.; Janicka, L.; Markowicz, K. M.; Achtert, P.; Artaxo, P.; Pauliquevis, T.; Souza, R. A. F.; Sharma, V. P.; van Zyl, P. G.; Beukes, J. P.; Sun, J. Y.; Rohwer, E. G.; Deng, R.; Mamouri, R. E.; Zamorano, F.

    2015-10-01

    A global vertically resolved aerosol data set covering more than 10 years of observations at more than 20 measurement sites distributed from 63° N to 52° S and 72° W to 124° E has been achieved within the Raman and polarization lidar network PollyNET. This network consists of portable, remote-controlled multiwavelength-polarization-Raman lidars (Polly) for automated and continuous 24/7 observations of clouds and aerosols. PollyNET is an independent, voluntary, and scientific network. All Polly lidars feature a standardized instrument design and apply unified calibration, quality control, and data analysis. The observations are processed in near-real time without manual intervention, and are presented online at http://polly.tropos.de. The paper gives an overview of the observations on four continents and two research vessels obtained with eight Polly systems. The specific aerosol types at these locations (mineral dust, smoke, dust-smoke and other dusty mixtures, urban haze, and volcanic ash) are identified by their Ångström exponent, lidar ratio, and depolarization ratio. The vertical aerosol distribution at the PollyNET locations is discussed on the basis of more than 55 000 automatically retrieved 30 min particle backscatter coefficient profiles at 532 nm. A seasonal analysis of measurements at selected sites revealed typical and extraordinary aerosol conditions as well as seasonal differences. These studies show the potential of PollyNET to support the establishment of a global aerosol climatology that covers the entire troposphere.

  20. VoxResNet: Deep voxelwise residual networks for brain segmentation from 3D MR images.

    Science.gov (United States)

    Chen, Hao; Dou, Qi; Yu, Lequan; Qin, Jing; Heng, Pheng-Ann

    2017-04-23

    Segmentation of key brain tissues from 3D medical images is of great significance for brain disease diagnosis, progression assessment and monitoring of neurologic conditions. While manual segmentation is time-consuming, laborious, and subjective, automated segmentation is quite challenging due to the complicated anatomical environment of brain and the large variations of brain tissues. We propose a novel voxelwise residual network (VoxResNet) with a set of effective training schemes to cope with this challenging problem. The main merit of residual learning is that it can alleviate the degradation problem when training a deep network so that the performance gains achieved by increasing the network depth can be fully leveraged. With this technique, our VoxResNet is built with 25 layers, and hence can generate more representative features to deal with the large variations of brain tissues than its rivals using hand-crafted features or shallower networks. In order to effectively train such a deep network with limited training data for brain segmentation, we seamlessly integrate multi-modality and multi-level contextual information into our network, so that the complementary information of different modalities can be harnessed and features of different scales can be exploited. Furthermore, an auto-context version of the VoxResNet is proposed by combining the low-level image appearance features, implicit shape information, and high-level context together for further improving the segmentation performance. Extensive experiments on the well-known benchmark (i.e., MRBrainS) of brain segmentation from 3D magnetic resonance (MR) images corroborated the efficacy of the proposed VoxResNet. Our method achieved the first place in the challenge out of 37 competitors including several state-of-the-art brain segmentation methods. Our method is inherently general and can be readily applied as a powerful tool to many brain-related studies, where accurate segmentation of brain

  1. High-Throughput and Low-Latency Network Communication with NetIO

    Science.gov (United States)

    Schumacher, Jörn; Plessl, Christian; Vandelli, Wainer

    2017-10-01

    HPC network technologies like Infiniband, TrueScale or OmniPath provide low- latency and high-throughput communication between hosts, which makes them attractive options for data-acquisition systems in large-scale high-energy physics experiments. Like HPC networks, DAQ networks are local and include a well specified number of systems. Unfortunately traditional network communication APIs for HPC clusters like MPI or PGAS exclusively target the HPC community and are not suited well for DAQ applications. It is possible to build distributed DAQ applications using low-level system APIs like Infiniband Verbs, but it requires a non-negligible effort and expert knowledge. At the same time, message services like ZeroMQ have gained popularity in the HEP community. They make it possible to build distributed applications with a high-level approach and provide good performance. Unfortunately, their usage usually limits developers to TCP/IP- based networks. While it is possible to operate a TCP/IP stack on top of Infiniband and OmniPath, this approach may not be very efficient compared to a direct use of native APIs. NetIO is a simple, novel asynchronous message service that can operate on Ethernet, Infiniband and similar network fabrics. In this paper the design and implementation of NetIO is presented and described, and its use is evaluated in comparison to other approaches. NetIO supports different high-level programming models and typical workloads of HEP applications. The ATLAS FELIX project [1] successfully uses NetIO as its central communication platform. The architecture of NetIO is described in this paper, including the user-level API and the internal data-flow design. The paper includes a performance evaluation of NetIO including throughput and latency measurements. The performance is compared against the state-of-the- art ZeroMQ message service. Performance measurements are performed in a lab environment with Ethernet and FDR Infiniband networks.

  2. The 11th Annual Mediterranean Ad Hoc Networking Workshop (Med-Hoc-Net 2012 )

    OpenAIRE

    Pitsillides, A.; Douligeris, C.; Vassiliou, V; Heijenk, Geert; Cavalcante de Oliveira, J.

    2012-01-01

    Message from the General Chairs Welcome to the 2012 Mediterranean Ad Hoc Networking Workshop in Ayia Napa, Cyprus. We are excited to host Med-Hoc-Net. As a major annual international workshop, following recent successful workshops in Sicily (2006), Corfu (2007), Palma de Mallorca (2008), Haifa (2009), Juan-les-pins (2010), and Favignana Island (2011), the 11th Med-Hoc-Net (2012) aims to serve as a platform for researchers and visionaries from the academia, the research laboratories, and the i...

  3. Community of Practice Applications from WaterNet: The NASA Water Cycle Solutions Network

    Science.gov (United States)

    Matthews, D.; Brilly, M.; Gregoric, G.; Polajnar, J.; Houser, P.; Rodell, M.; Lehning, M.

    2009-04-01

    WaterNet is a new international network of researchers, stakeholders, and end-users of remote sensing tools that will benefit the water resources management community. It addresses a means for enhancing the social and economic developments of nations by increased use of practical research products from the terrestrial water cycle for making informed decisions. This paper provides a summary of the Water Cycle Community of Practice (CoP) plans and examples of Land Surface Model (LSM) applications for extreme events - floods, droughts, and heavy snowstorms in Europe. It discusses the concept of NASA's solutions networks focusing on the WaterNet. It invites EGU teams to join our WaterNet network. The NASA Water cycle Solutions Network's goal is to improve and optimize the sustained ability of water cycle researchers, stakeholders, organizations and networks to interact, identify, harness, and extend NASA research results to augment decision support tools and meet national needs. Our team is developing WaterNet by engaging relevant NASA water cycle research and community-of-practice organizations, to develop what we term an "actionable database" that can be used to communicate and connect NASA Water cycle research Results (NWRs) towards the improvement of water-related Decision Support Tools (DSTs). Recognizing that the European Commission and European Space Agency have also developed many related research products (EWRs), we seek to learn about these and network with the EU teams to include their information in the WaterNet actionable data base. Recognizing the many existing highly valuable water-related science and application networks in the US and EU, we focus the balance of our efforts on enabling their interoperability - facilitating access and communications among decision-makers and scientists. We present results of our initial focus on identification, collection, and analysis of the two end points, these being the NWRs and EWRs and water related DSTs. We

  4. The G protein-coupled receptor heterodimer network (GPCR-HetNet) and its hub components.

    Science.gov (United States)

    Borroto-Escuela, Dasiel O; Brito, Ismel; Romero-Fernandez, Wilber; Di Palma, Michael; Oflijan, Julia; Skieterska, Kamila; Duchou, Jolien; Van Craenenbroeck, Kathleen; Suárez-Boomgaard, Diana; Rivera, Alicia; Guidolin, Diego; Agnati, Luigi F; Fuxe, Kjell

    2014-05-14

    G protein-coupled receptors (GPCRs) oligomerization has emerged as a vital characteristic of receptor structure. Substantial experimental evidence supports the existence of GPCR-GPCR interactions in a coordinated and cooperative manner. However, despite the current development of experimental techniques for large-scale detection of GPCR heteromers, in order to understand their connectivity it is necessary to develop novel tools to study the global heteroreceptor networks. To provide insight into the overall topology of the GPCR heteromers and identify key players, a collective interaction network was constructed. Experimental interaction data for each of the individual human GPCR protomers was obtained manually from the STRING and SCOPUS databases. The interaction data were used to build and analyze the network using Cytoscape software. The network was treated as undirected throughout the study. It is comprised of 156 nodes, 260 edges and has a scale-free topology. Connectivity analysis reveals a significant dominance of intrafamily versus interfamily connections. Most of the receptors within the network are linked to each other by a small number of edges. DRD2, OPRM, ADRB2, AA2AR, AA1R, OPRK, OPRD and GHSR are identified as hubs. In a network representation 10 modules/clusters also appear as a highly interconnected group of nodes. Information on this GPCR network can improve our understanding of molecular integration. GPCR-HetNet has been implemented in Java and is freely available at http://www.iiia.csic.es/~ismel/GPCR-Nets/index.html.

  5. EgoNet: identification of human disease ego-network modules

    Science.gov (United States)

    2014-01-01

    Background Mining novel biomarkers from gene expression profiles for accurate disease classification is challenging due to small sample size and high noise in gene expression measurements. Several studies have proposed integrated analyses of microarray data and protein-protein interaction (PPI) networks to find diagnostic subnetwork markers. However, the neighborhood relationship among network member genes has not been fully considered by those methods, leaving many potential gene markers unidentified. The main idea of this study is to take full advantage of the biological observation that genes associated with the same or similar diseases commonly reside in the same neighborhood of molecular networks. Results We present EgoNet, a novel method based on egocentric network-analysis techniques, to exhaustively search and prioritize disease subnetworks and gene markers from a large-scale biological network. When applied to a triple-negative breast cancer (TNBC) microarray dataset, the top selected modules contain both known gene markers in TNBC and novel candidates, such as RAD51 and DOK1, which play a central role in their respective ego-networks by connecting many differentially expressed genes. Conclusions Our results suggest that EgoNet, which is based on the ego network concept, allows the identification of novel biomarkers and provides a deeper understanding of their roles in complex diseases. PMID:24773628

  6. DyCoNet: a Gephi plugin for community detection in dynamic complex networks.

    Science.gov (United States)

    Kauffman, Julie; Kittas, Aristotelis; Bennett, Laura; Tsoka, Sophia

    2014-01-01

    Community structure detection has proven to be important in revealing the underlying organisation of complex networks. While most current analyses focus on static networks, the detection of communities in dynamic data is both challenging and timely. An analysis and visualisation procedure for dynamic networks is presented here, which identifies communities and sub-communities that persist across multiple network snapshots. An existing method for community detection in dynamic networks is adapted, extended, and implemented. We demonstrate the applicability of this method to detect communities in networks where individuals tend not to change their community affiliation very frequently. When stability of communities cannot be assumed, we show that the sub-community model may be a better alternative. This is illustrated through test cases of social and biological networks. A plugin for Gephi, an open-source software program used for graph visualisation and manipulation, named "DyCoNet", was created to execute the algorithm and is freely available from https://github.com/juliemkauffman/DyCoNet.

  7. The G Protein-Coupled Receptor Heterodimer Network (GPCR-HetNet and Its Hub Components

    Directory of Open Access Journals (Sweden)

    Dasiel O. Borroto-Escuela

    2014-05-01

    Full Text Available G protein-coupled receptors (GPCRs oligomerization has emerged as a vital characteristic of receptor structure. Substantial experimental evidence supports the existence of GPCR-GPCR interactions in a coordinated and cooperative manner. However, despite the current development of experimental techniques for large-scale detection of GPCR heteromers, in order to understand their connectivity it is necessary to develop novel tools to study the global heteroreceptor networks. To provide insight into the overall topology of the GPCR heteromers and identify key players, a collective interaction network was constructed. Experimental interaction data for each of the individual human GPCR protomers was obtained manually from the STRING and SCOPUS databases. The interaction data were used to build and analyze the network using Cytoscape software. The network was treated as undirected throughout the study. It is comprised of 156 nodes, 260 edges and has a scale-free topology. Connectivity analysis reveals a significant dominance of intrafamily versus interfamily connections. Most of the receptors within the network are linked to each other by a small number of edges. DRD2, OPRM, ADRB2, AA2AR, AA1R, OPRK, OPRD and GHSR are identified as hubs. In a network representation 10 modules/clusters also appear as a highly interconnected group of nodes. Information on this GPCR network can improve our understanding of molecular integration. GPCR-HetNet has been implemented in Java and is freely available at http://www.iiia.csic.es/~ismel/GPCR-Nets/index.html.

  8. DyCoNet: a Gephi plugin for community detection in dynamic complex networks.

    Directory of Open Access Journals (Sweden)

    Julie Kauffman

    Full Text Available Community structure detection has proven to be important in revealing the underlying organisation of complex networks. While most current analyses focus on static networks, the detection of communities in dynamic data is both challenging and timely. An analysis and visualisation procedure for dynamic networks is presented here, which identifies communities and sub-communities that persist across multiple network snapshots. An existing method for community detection in dynamic networks is adapted, extended, and implemented. We demonstrate the applicability of this method to detect communities in networks where individuals tend not to change their community affiliation very frequently. When stability of communities cannot be assumed, we show that the sub-community model may be a better alternative. This is illustrated through test cases of social and biological networks. A plugin for Gephi, an open-source software program used for graph visualisation and manipulation, named "DyCoNet", was created to execute the algorithm and is freely available from https://github.com/juliemkauffman/DyCoNet.

  9. Few Ant Species Play a Central Role Linking Different Plant Resources in a Network in Rupestrian Grasslands.

    Directory of Open Access Journals (Sweden)

    Fernanda V Costa

    Full Text Available Ant-plant associations are an outstanding model to study the entangled ecological interactions that structure communities. However, most studies of plant-animal networks focus on only one type of resource that mediates these interactions (e.g, nectar or fruits, leading to a biased understanding of community structure. New approaches, however, have made possible to study several interaction types simultaneously through multilayer networks models. Here, we use this approach to ask whether the structural patterns described to date for ant-plant networks hold when multiple interactions with plant-derived food rewards are considered. We tested whether networks characterized by different resource types differ in specialization and resource partitioning among ants, and whether the identity of the core ant species is similar among resource types. We monitored ant interactions with extrafloral nectaries, flowers, and fruits, as well as trophobiont hemipterans feeding on plants, for one year, in seven rupestrian grassland (campo rupestre sites in southeastern Brazil. We found a highly tangled ant-plant network in which plants offering different resource types are connected by a few central ant species. The multilayer network had low modularity and specialization, but ant specialization and niche overlap differed according to the type of resource used. Beyond detecting structural differences across networks, our study demonstrates empirically that the core of most central ant species is similar across them. We suggest that foraging strategies of ant species, such as massive recruitment, may determine specialization and resource partitioning in ant-plant interactions. As this core of ant species is involved in multiple ecosystem functions, it may drive the diversity and evolution of the entire campo rupestre community.

  10. Few Ant Species Play a Central Role Linking Different Plant Resources in a Network in Rupestrian Grasslands.

    Science.gov (United States)

    Costa, Fernanda V; Mello, Marco A R; Bronstein, Judith L; Guerra, Tadeu J; Muylaert, Renata L; Leite, Alice C; Neves, Frederico S

    2016-01-01

    Ant-plant associations are an outstanding model to study the entangled ecological interactions that structure communities. However, most studies of plant-animal networks focus on only one type of resource that mediates these interactions (e.g, nectar or fruits), leading to a biased understanding of community structure. New approaches, however, have made possible to study several interaction types simultaneously through multilayer networks models. Here, we use this approach to ask whether the structural patterns described to date for ant-plant networks hold when multiple interactions with plant-derived food rewards are considered. We tested whether networks characterized by different resource types differ in specialization and resource partitioning among ants, and whether the identity of the core ant species is similar among resource types. We monitored ant interactions with extrafloral nectaries, flowers, and fruits, as well as trophobiont hemipterans feeding on plants, for one year, in seven rupestrian grassland (campo rupestre) sites in southeastern Brazil. We found a highly tangled ant-plant network in which plants offering different resource types are connected by a few central ant species. The multilayer network had low modularity and specialization, but ant specialization and niche overlap differed according to the type of resource used. Beyond detecting structural differences across networks, our study demonstrates empirically that the core of most central ant species is similar across them. We suggest that foraging strategies of ant species, such as massive recruitment, may determine specialization and resource partitioning in ant-plant interactions. As this core of ant species is involved in multiple ecosystem functions, it may drive the diversity and evolution of the entire campo rupestre community.

  11. Differential C3NET reveals disease networks of direct physical interactions

    Directory of Open Access Journals (Sweden)

    Markowetz Florian

    2011-07-01

    Full Text Available Abstract Background Genes might have different gene interactions in different cell conditions, which might be mapped into different networks. Differential analysis of gene networks allows spotting condition-specific interactions that, for instance, form disease networks if the conditions are a disease, such as cancer, and normal. This could potentially allow developing better and subtly targeted drugs to cure cancer. Differential network analysis with direct physical gene interactions needs to be explored in this endeavour. Results C3NET is a recently introduced information theory based gene network inference algorithm that infers direct physical gene interactions from expression data, which was shown to give consistently higher inference performances over various networks than its competitors. In this paper, we present, DC3net, an approach to employ C3NET in inferring disease networks. We apply DC3net on a synthetic and real prostate cancer datasets, which show promising results. With loose cutoffs, we predicted 18583 interactions from tumor and normal samples in total. Although there are no reference interactions databases for the specific conditions of our samples in the literature, we found verifications for 54 of our predicted direct physical interactions from only four of the biological interaction databases. As an example, we predicted that RAD50 with TRF2 have prostate cancer specific interaction that turned out to be having validation from the literature. It is known that RAD50 complex associates with TRF2 in the S phase of cell cycle, which suggests that this predicted interaction may promote telomere maintenance in tumor cells in order to allow tumor cells to divide indefinitely. Our enrichment analysis suggests that the identified tumor specific gene interactions may be potentially important in driving the growth in prostate cancer. Additionally, we found that the highest connected subnetwork of our predicted tumor specific network

  12. The Asian Dust and Aerosol Lidar Observation Network (AD-NET: Strategy and Progress

    Directory of Open Access Journals (Sweden)

    Nishizawa Tomoaki

    2016-01-01

    Full Text Available We have operated a ground-based lidar network AD-Net using dual wavelength (532, 1064nm depolarization Mie lidar continuously and observed movement of Asian dust and air pollution aerosols in East Asia since 2001. This lidar network observation contributed to understanding of the occurrence and transport mechanisms of Asian dust, validation of chemical transport models, data assimilation and epidemiologic studies. To better understand the optical and microphysical properties, externally and internally mixing states, and the movements of Asian dust and airpollution aerosols, we go forward with introducing a multi-wavelength Raman lidar to the AD-Net and developing a multi-wavelength technique of HSRL in order to evaluate optical concentrations of more aerosol components. We will use this evolving AD-Net for validation of Earth-CARE satellite observation and data assimilation to evaluate emissions of air pollution and dust aerosols in East Asia. We go forward with deploying an in-situ instrument polarization optical particle counter (POPC, which can measure size distributions and non-sphericity of aerosols, to several main AD-Net sites and conducting simultaneous observation of POPC and lidar to clarify internally mixed state of Asian dust and air pollution aerosols transported from the Asian continent to Japan.

  13. BrainNet Viewer: a network visualization tool for human brain connectomics.

    Science.gov (United States)

    Xia, Mingrui; Wang, Jinhui; He, Yong

    2013-01-01

    The human brain is a complex system whose topological organization can be represented using connectomics. Recent studies have shown that human connectomes can be constructed using various neuroimaging technologies and further characterized using sophisticated analytic strategies, such as graph theory. These methods reveal the intriguing topological architectures of human brain networks in healthy populations and explore the changes throughout normal development and aging and under various pathological conditions. However, given the huge complexity of this methodology, toolboxes for graph-based network visualization are still lacking. Here, using MATLAB with a graphical user interface (GUI), we developed a graph-theoretical network visualization toolbox, called BrainNet Viewer, to illustrate human connectomes as ball-and-stick models. Within this toolbox, several combinations of defined files with connectome information can be loaded to display different combinations of brain surface, nodes and edges. In addition, display properties, such as the color and size of network elements or the layout of the figure, can be adjusted within a comprehensive but easy-to-use settings panel. Moreover, BrainNet Viewer draws the brain surface, nodes and edges in sequence and displays brain networks in multiple views, as required by the user. The figure can be manipulated with certain interaction functions to display more detailed information. Furthermore, the figures can be exported as commonly used image file formats or demonstration video for further use. BrainNet Viewer helps researchers to visualize brain networks in an easy, flexible and quick manner, and this software is freely available on the NITRC website (www.nitrc.org/projects/bnv/).

  14. BrainNet Viewer: a network visualization tool for human brain connectomics.

    Directory of Open Access Journals (Sweden)

    Mingrui Xia

    Full Text Available The human brain is a complex system whose topological organization can be represented using connectomics. Recent studies have shown that human connectomes can be constructed using various neuroimaging technologies and further characterized using sophisticated analytic strategies, such as graph theory. These methods reveal the intriguing topological architectures of human brain networks in healthy populations and explore the changes throughout normal development and aging and under various pathological conditions. However, given the huge complexity of this methodology, toolboxes for graph-based network visualization are still lacking. Here, using MATLAB with a graphical user interface (GUI, we developed a graph-theoretical network visualization toolbox, called BrainNet Viewer, to illustrate human connectomes as ball-and-stick models. Within this toolbox, several combinations of defined files with connectome information can be loaded to display different combinations of brain surface, nodes and edges. In addition, display properties, such as the color and size of network elements or the layout of the figure, can be adjusted within a comprehensive but easy-to-use settings panel. Moreover, BrainNet Viewer draws the brain surface, nodes and edges in sequence and displays brain networks in multiple views, as required by the user. The figure can be manipulated with certain interaction functions to display more detailed information. Furthermore, the figures can be exported as commonly used image file formats or demonstration video for further use. BrainNet Viewer helps researchers to visualize brain networks in an easy, flexible and quick manner, and this software is freely available on the NITRC website (www.nitrc.org/projects/bnv/.

  15. MetaNET--a web-accessible interactive platform for biological metabolic network analysis.

    Science.gov (United States)

    Narang, Pankaj; Khan, Shawez; Hemrom, Anmol Jaywant; Lynn, Andrew Michael

    2014-01-01

    Metabolic reactions have been extensively studied and compiled over the last century. These have provided a theoretical base to implement models, simulations of which are used to identify drug targets and optimize metabolic throughput at a systemic level. While tools for the perturbation of metabolic networks are available, their applications are limited and restricted as they require varied dependencies and often a commercial platform for full functionality. We have developed MetaNET, an open source user-friendly platform-independent and web-accessible resource consisting of several pre-defined workflows for metabolic network analysis. MetaNET is a web-accessible platform that incorporates a range of functions which can be combined to produce different simulations related to metabolic networks. These include (i) optimization of an objective function for wild type strain, gene/catalyst/reaction knock-out/knock-down analysis using flux balance analysis. (ii) flux variability analysis (iii) chemical species participation (iv) cycles and extreme paths identification and (v) choke point reaction analysis to facilitate identification of potential drug targets. The platform is built using custom scripts along with the open-source Galaxy workflow and Systems Biology Research Tool as components. Pre-defined workflows are available for common processes, and an exhaustive list of over 50 functions are provided for user defined workflows. MetaNET, available at http://metanet.osdd.net , provides a user-friendly rich interface allowing the analysis of genome-scale metabolic networks under various genetic and environmental conditions. The framework permits the storage of previous results, the ability to repeat analysis and share results with other users over the internet as well as run different tools simultaneously using pre-defined workflows, and user-created custom workflows.

  16. The FLaReNet Thematic Network: a Global Forum for Cooperation

    OpenAIRE

    Calzolari, Nicoletta; Soria, Claudia

    2009-01-01

    The aim of this short paper is to present the FLaReNet Thematic Network for Language Resources and Language Technologies to the Asian Language Resources Community. Creation of a wide and committed community and of a shared policy in the field of Language Resources is essential in order to foster a substantial advancement of the field. This paper presents the background, overall objectives and methodology of work of the project, as well as a set of preliminary results.

  17. NET.EXCEL thematic network: networking for research on radioactive waste geological disposal

    Energy Technology Data Exchange (ETDEWEB)

    Svemar, Christer [Svensk Karnbranslemantering AB, SKB, Aspo Hard Rock Laboratory, PL 300, S-57295 Figeholm (Sweden); Vira, Juhani [Posiva Oy, FIN-27160 Olkiluoto (Finland); Astudillo, Julio [Empresa Nacional de Residuos Radioactivos SA, ENRESA, Emilio Vargas 7, E-Madrid (Spain)] [and others

    2004-07-01

    The NET.EXCEL project concerns the forming of a network of European end users for analysing the present status and future needs in Research, Technical development and Demonstration (RTD) for the disposal of highly radioactive waste in the three classical rock media: salt, clay/clay sediments and crystalline rock. The aim is to generate value additional to that gained by the individual participants: Svensk Kaernbraenslehantering AB (Sweden), Posiva Oy (Finland), Empresa Nacional de Residuos Radioactivos SA (Spain), Gesellschaft fuer Anlagen- und Reaktorsicherheit mbH (Germany), Agence nationale pour la gestion des dechets radioactifs (France), Nationale Genossenschaft fuer die Lagerung radioaktiver Abfaelle (Switzerland), Organisme National des Dechets Radioactifs et des Matieres Fissiles Enrichies (Belgium) and United Kingdom Nirex Limited (UK). The work performed in various research institutes as well as in large-scale underground rock laboratories in European countries to develop techniques for the safe handling and disposal of highly radioactive waste has led to a substantial build-up of experience. The experience covers both the practical areas of repository design and construction, waste encapsulation/conditioning (as over-packing) and disposal, as well as the theoretical evaluation of long term safety. In general, there are differences in the type of high level and long lived radioactive waste (for instance, either spent fuel or vitrified waste if the reprocessing option is considered by utilities) that the participating organisations have responsibilities for, and the time-schedules for their work. The national regulatory framework may also induce some differences. One of the initial issues in the project is to shed light on the rationale for these observed differences. In contrast, the practical way to carry out the needed RTD-activities and the principles behind the process to establish priorities for the necessary RTD-work is quite similar. Common ground

  18. CellNetVis: a web tool for visualization of biological networks using force-directed layout constrained by cellular components.

    Science.gov (United States)

    Heberle, Henry; Carazzolle, Marcelo Falsarella; Telles, Guilherme P; Meirelles, Gabriela Vaz; Minghim, Rosane

    2017-09-13

    The advent of "omics" science has brought new perspectives in contemporary biology through the high-throughput analyses of molecular interactions, providing new clues in protein/gene function and in the organization of biological pathways. Biomolecular interaction networks, or graphs, are simple abstract representations where the components of a cell (e.g. proteins, metabolites etc.) are represented by nodes and their interactions are represented by edges. An appropriate visualization of data is crucial for understanding such networks, since pathways are related to functions that occur in specific regions of the cell. The force-directed layout is an important and widely used technique to draw networks according to their topologies. Placing the networks into cellular compartments helps to quickly identify where network elements are located and, more specifically, concentrated. Currently, only a few tools provide the capability of visually organizing networks by cellular compartments. Most of them cannot handle large and dense networks. Even for small networks with hundreds of nodes the available tools are not able to reposition the network while the user is interacting, limiting the visual exploration capability. Here we propose CellNetVis, a web tool to easily display biological networks in a cell diagram employing a constrained force-directed layout algorithm. The tool is freely available and open-source. It was originally designed for networks generated by the Integrated Interactome System and can be used with networks from others databases, like InnateDB. CellNetVis has demonstrated to be applicable for dynamic investigation of complex networks over a consistent representation of a cell on the Web, with capabilities not matched elsewhere.

  19. NetMatchStar: an enhanced Cytoscape network querying app [version 1; referees: 2 approved

    Directory of Open Access Journals (Sweden)

    Fabio Rinnone

    2015-08-01

    Full Text Available We present NetMatchStar, a Cytoscape app to find all the occurrences of a query graph in a network and check for its significance as a motif with respect to seven different random models. The query can be uploaded or built from scratch using Cytoscape facilities. The app significantly enhances the previous NetMatch in style, performance and functionality. Notably NetMatchStar allows queries with wildcards.

  20. Lewis Carroll's Doublets net of English words: network heterogeneity in a complex system.

    Directory of Open Access Journals (Sweden)

    Hsieh Fushing

    Full Text Available Lewis Carroll's English word game Doublets is represented as a system of networks with each node being an English word and each connectivity edge confirming that its two ending words are equal in letter length, but different by exactly one letter. We show that this system, which we call the Doublets net, constitutes a complex body of linguistic knowledge concerning English word structure that has computable multiscale features. Distributed morphological, phonological and orthographic constraints and the language's local redundancy are seen at the node level. Phonological communities are seen at the network level. And a balancing act between the language's global efficiency and redundancy is seen at the system level. We develop a new measure of intrinsic node-to-node distance and a computational algorithm, called community geometry, which reveal the implicit multiscale structure within binary networks. Because the Doublets net is a modular complex cognitive system, the community geometry and computable multi-scale structural information may provide a foundation for understanding computational learning in many systems whose network structure has yet to be fully analyzed.

  1. Revenue-Maximizing Radio Access Technology Selection with Net Neutrality Compliance in Heterogeneous Wireless Networks

    Directory of Open Access Journals (Sweden)

    Elissar Khloussy

    2018-01-01

    Full Text Available The net neutrality principle states that users should have equal access to all Internet content and that Internet Service Providers (ISPs should not practice differentiated treatment on any of the Internet traffic. While net neutrality aims to restrain any kind of discrimination, it also grants exemption to a certain category of traffic known as specialized services (SS, by allowing the ISP to dedicate part of the resources for the latter. In this work, we consider a heterogeneous LTE/WiFi wireless network and we investigate revenue-maximizing Radio Access Technology (RAT selection strategies that are net neutrality-compliant, with exemption granted to SS traffic. Our objective is to find out how the bandwidth reservation for SS traffic would be made in a way that allows maximizing the revenue while being in compliance with net neutrality and how the choice of the ratio of reserved bandwidth would affect the revenue. The results show that reserving bandwidth for SS traffic in one RAT (LTE can achieve higher revenue. On the other hand, when the capacity is reserved across both LTE and WiFi, higher social benefit in terms of number of admitted users can be realized, as well as lower blocking probability for the Internet access traffic.

  2. A WiMAX Networked UAV Telemetry System for Net-Centric Remote Sensing and Range Surveillance Project

    Data.gov (United States)

    National Aeronautics and Space Administration — A WiMAX networked UAV Telemetry System (WNUTS) is designed for net-centric remote sensing and launch range surveillance applications. WNUTS integrates a MIMO powered...

  3. Modeling and predicting the Spanish Bachillerato academic results over the next few years using a random network model

    Science.gov (United States)

    Cortés, J.-C.; Colmenar, J.-M.; Hidalgo, J.-I.; Sánchez-Sánchez, A.; Santonja, F.-J.; Villanueva, R.-J.

    2016-01-01

    Academic performance is a concern of paramount importance in Spain, where around of 30 % of the students in the last two courses in high school, before to access to the labor market or to the university, do not achieve the minimum knowledge required according to the Spanish educational law in force. In order to analyze this problem, we propose a random network model to study the dynamics of the academic performance in Spain. Our approach is based on the idea that both, good and bad study habits, are a mixture of personal decisions and influence of classmates. Moreover, in order to consider the uncertainty in the estimation of model parameters, we perform a lot of simulations taking as the model parameters the ones that best fit data returned by the Differential Evolution algorithm. This technique permits to forecast model trends in the next few years using confidence intervals.

  4. PyBoolNet: a python package for the generation, analysis and visualization of boolean networks.

    Science.gov (United States)

    Klarner, Hannes; Streck, Adam; Siebert, Heike

    2017-03-01

    The goal of this project is to provide a simple interface to working with Boolean networks. Emphasis is put on easy access to a large number of common tasks including the generation and manipulation of networks, attractor and basin computation, model checking and trap space computation, execution of established graph algorithms as well as graph drawing and layouts. P y B ool N et is a Python package for working with Boolean networks that supports simple access to model checking via N u SMV, standard graph algorithms via N etwork X and visualization via dot . In addition, state of the art attractor computation exploiting P otassco ASP is implemented. The package is function-based and uses only native Python and N etwork X data types. https://github.com/hklarner/PyBoolNet. hannes.klarner@fu-berlin.de.

  5. Tutorials on Agent-based Modelling with NetLogo and Network Analysis with Pajek

    Science.gov (United States)

    Berryman, Matthew J.; Angus, Simon D.

    Complex adaptive systems typically contain multiple, heterogeneous agents, with non-trivial interactions. They tend to produce emergent (larger-scale) phenomena. Agent-based modelling allows one to readily capture the behaviour of a group of heterogeneous agents (such as people, animals, et cetera), with diverse behaviour and important interactions, so it is a natural fit to modelling complex systems. Many complex systems (and agent-based models thereof) can be thought of as containing networks, either explicitly or implicitly. Therefore for complex systems research it is important to have a good understanding of network analysis techniques. This chapter is aimed at beginners to complex systems modelling and network analysis, using NetLogo (Section 10.1) and Pajek (Section 10.2) respectively. It is also aimed at more advanced complex systems modellers who want an introduction to these platforms.

  6. SuperWiseNet - a unique network platform to leverage student entrepreneurship projects

    DEFF Research Database (Denmark)

    Gertsen, Frank; Høgsaa, Asger; Tollestrup, Christian H. T.

    2016-01-01

    and an experience-enriched forum consisting of teachers, industry experts, entrepreneurs and specialty consultants. The interaction unfolds as a series of workshops facilitating the progression of the student teams’ four months project work. The students of concern are enrolled in the international Entrepreneurial...... Engineering Master’s Program [1] at Aalborg University, Denmark (120 ECTS credits). The paper will describe and elaborate on the functioning of SuperWiseNet including a discussion of advantages for students, faculty, and industry/externals as well as some challenges with the concept.......The area of interests is the development of a potentially new complementary industry-university component, which has been labelled ‘SuperWiseNet’ for the context of academic entrepreneurial programs. The SuperWiseNet is a network-based platform for interaction between students of entrepreneurship...

  7. Assessing computational genomics skills: Our experience in the H3ABioNet African bioinformatics network.

    Directory of Open Access Journals (Sweden)

    C Victor Jongeneel

    2017-06-01

    Full Text Available The H3ABioNet pan-African bioinformatics network, which is funded to support the Human Heredity and Health in Africa (H3Africa program, has developed node-assessment exercises to gauge the ability of its participating research and service groups to analyze typical genome-wide datasets being generated by H3Africa research groups. We describe a framework for the assessment of computational genomics analysis skills, which includes standard operating procedures, training and test datasets, and a process for administering the exercise. We present the experiences of 3 research groups that have taken the exercise and the impact on their ability to manage complex projects. Finally, we discuss the reasons why many H3ABioNet nodes have declined so far to participate and potential strategies to encourage them to do so.

  8. RulNet: A Web-Oriented Platform for Regulatory Network Inference, Application to Wheat -Omics Data.

    Science.gov (United States)

    Vincent, Jonathan; Martre, Pierre; Gouriou, Benjamin; Ravel, Catherine; Dai, Zhanwu; Petit, Jean-Marc; Pailloux, Marie

    2015-01-01

    With the increasing amount of -omics data available, a particular effort has to be made to provide suitable analysis tools. A major challenge is that of unraveling the molecular regulatory networks from massive and heterogeneous datasets. Here we describe RulNet, a web-oriented platform dedicated to the inference and analysis of regulatory networks from qualitative and quantitative -omics data by means of rule discovery. Queries for rule discovery can be written in an extended form of the RQL query language, which has a syntax similar to SQL. RulNet also offers users interactive features that progressively adjust and refine the inferred networks. In this paper, we present a functional characterization of RulNet and compare inferred networks with correlation-based approaches. The performance of RulNet has been evaluated using the three benchmark datasets used for the transcriptional network inference challenge DREAM5. Overall, RulNet performed as well as the best methods that participated in this challenge and it was shown to behave more consistently when compared across the three datasets. Finally, we assessed the suitability of RulNet to analyze experimental -omics data and to infer regulatory networks involved in the response to nitrogen and sulfur supply in wheat (Triticum aestivum L.) grains. The results highlight putative actors governing the response to nitrogen and sulfur supply in wheat grains. We evaluate the main characteristics and features of RulNet as an all-in-one solution for RN inference, visualization and editing. Using simple yet powerful RulNet queries allowed RNs involved in the adaptation of wheat grain to N and S supply to be discovered. We demonstrate the effectiveness and suitability of RulNet as a platform for the analysis of RNs involving different types of -omics data. The results are promising since they are consistent with what was previously established by the scientific community.

  9. [Improving Health Care for Patients with Somatoform and Functional Disorders: A Collaborative Stepped Care Network (Sofu-Net)].

    Science.gov (United States)

    Shedden-Mora, Meike; Lau, Katharina; Kuby, Amina; Groß, Beatrice; Gladigau, Maria; Fabisch, Alexandra; Löwe, Bernd

    2015-07-01

    The management of somatoform disorders in primary care is often limited due to low diagnostic accuracy, delayed referral to psychotherapy and overuse of health care. To address these difficulties, this study aimed to establish a collaborative stepped health care network (Sofu-Net). Sofu-Net was established among 41 primary care physicians, 35 psychotherapists and 8 mental health clinics. Baseline assessment in primary care showed elevated psychopathology and deficits in health care among patients with somatoform symptoms. Network partners provided positive evaluations of Sofu-Net. © Georg Thieme Verlag KG Stuttgart · New York.

  10. Networked collaborative pseudo-dynamic testing of a multi-span bridge based on NetSLab

    Science.gov (United States)

    Cai, Xinjiang; Tian, Shizhu; Wang, Dapeng; Xiao, Yan

    2009-09-01

    Modern dynamic tests such as networked collaborative pseudo-dynamic testing (PDT) provide new tools to study the dynamic performance of large and complex structures. In this paper, several networked collaborative PDT systems established in China and abroad are introduced, including a detailed description of the first networked collaborative platform that involved the construction of a standardized demonstration procedure for networked collaborative PDT. The example is a multi-span bridge with RC piers retrofitted by FRP, and a networked structural laboratory (NetSLab) platform is used to link distributed laboratories located at several universities together. Substructure technology is also used in the testing. The characteristics, resource sharing and collaborative work of NetSLab are described, and the results illustrate that use of the NetSLab is feasible for studying the dynamic performance of multi-span bridge structures.

  11. Modularization of biochemical networks based on classification of Petri net t-invariants

    Directory of Open Access Journals (Sweden)

    Grunwald Stefanie

    2008-02-01

    Full Text Available Abstract Background Structural analysis of biochemical networks is a growing field in bioinformatics and systems biology. The availability of an increasing amount of biological data from molecular biological networks promises a deeper understanding but confronts researchers with the problem of combinatorial explosion. The amount of qualitative network data is growing much faster than the amount of quantitative data, such as enzyme kinetics. In many cases it is even impossible to measure quantitative data because of limitations of experimental methods, or for ethical reasons. Thus, a huge amount of qualitative data, such as interaction data, is available, but it was not sufficiently used for modeling purposes, until now. New approaches have been developed, but the complexity of data often limits the application of many of the methods. Biochemical Petri nets make it possible to explore static and dynamic qualitative system properties. One Petri net approach is model validation based on the computation of the system's invariant properties, focusing on t-invariants. T-invariants correspond to subnetworks, which describe the basic system behavior. With increasing system complexity, the basic behavior can only be expressed by a huge number of t-invariants. According to our validation criteria for biochemical Petri nets, the necessary verification of the biological meaning, by interpreting each subnetwork (t-invariant manually, is not possible anymore. Thus, an automated, biologically meaningful classification would be helpful in analyzing t-invariants, and supporting the understanding of the basic behavior of the considered biological system. Methods Here, we introduce a new approach to automatically classify t-invariants to cope with network complexity. We apply clustering techniques such as UPGMA, Complete Linkage, Single Linkage, and Neighbor Joining in combination with different distance measures to get biologically meaningful clusters (t

  12. k-Same-Net: k-Anonymity with Generative Deep Neural Networks for Face Deidentification

    Directory of Open Access Journals (Sweden)

    Blaž Meden

    2018-01-01

    Full Text Available Image and video data are today being shared between government entities and other relevant stakeholders on a regular basis and require careful handling of the personal information contained therein. A popular approach to ensure privacy protection in such data is the use of deidentification techniques, which aim at concealing the identity of individuals in the imagery while still preserving certain aspects of the data after deidentification. In this work, we propose a novel approach towards face deidentification, called k-Same-Net, which combines recent Generative Neural Networks (GNNs with the well-known k-Anonymitymechanism and provides formal guarantees regarding privacy protection on a closed set of identities. Our GNN is able to generate synthetic surrogate face images for deidentification by seamlessly combining features of identities used to train the GNN model. Furthermore, it allows us to control the image-generation process with a small set of appearance-related parameters that can be used to alter specific aspects (e.g., facial expressions, age, gender of the synthesized surrogate images. We demonstrate the feasibility of k-Same-Net in comprehensive experiments on the XM2VTS and CK+ datasets. We evaluate the efficacy of the proposed approach through reidentification experiments with recent recognition models and compare our results with competing deidentification techniques from the literature. We also present facial expression recognition experiments to demonstrate the utility-preservation capabilities of k-Same-Net. Our experimental results suggest that k-Same-Net is a viable option for facial deidentification that exhibits several desirable characteristics when compared to existing solutions in this area.

  13. Drainage network extraction from a high-resolution DEM using parallel programming in the .NET Framework

    Science.gov (United States)

    Du, Chao; Ye, Aizhong; Gan, Yanjun; You, Jinjun; Duan, Qinyun; Ma, Feng; Hou, Jingwen

    2017-12-01

    High-resolution Digital Elevation Models (DEMs) can be used to extract high-accuracy prerequisite drainage networks. A higher resolution represents a larger number of grids. With an increase in the number of grids, the flow direction determination will require substantial computer resources and computing time. Parallel computing is a feasible method with which to resolve this problem. In this paper, we proposed a parallel programming method within the .NET Framework with a C# Compiler in a Windows environment. The basin is divided into sub-basins, and subsequently the different sub-basins operate on multiple threads concurrently to calculate flow directions. The method was applied to calculate the flow direction of the Yellow River basin from 3 arc-second resolution SRTM DEM. Drainage networks were extracted and compared with HydroSHEDS river network to assess their accuracy. The results demonstrate that this method can calculate the flow direction from high-resolution DEMs efficiently and extract high-precision continuous drainage networks.

  14. TasselNet: counting maize tassels in the wild via local counts regression network.

    Science.gov (United States)

    Lu, Hao; Cao, Zhiguo; Xiao, Yang; Zhuang, Bohan; Shen, Chunhua

    2017-01-01

    Accurately counting maize tassels is important for monitoring the growth status of maize plants. This tedious task, however, is still mainly done by manual efforts. In the context of modern plant phenotyping, automating this task is required to meet the need of large-scale analysis of genotype and phenotype. In recent years, computer vision technologies have experienced a significant breakthrough due to the emergence of large-scale datasets and increased computational resources. Naturally image-based approaches have also received much attention in plant-related studies. Yet a fact is that most image-based systems for plant phenotyping are deployed under controlled laboratory environment. When transferring the application scenario to unconstrained in-field conditions, intrinsic and extrinsic variations in the wild pose great challenges for accurate counting of maize tassels, which goes beyond the ability of conventional image processing techniques. This calls for further robust computer vision approaches to address in-field variations. This paper studies the in-field counting problem of maize tassels. To our knowledge, this is the first time that a plant-related counting problem is considered using computer vision technologies under unconstrained field-based environment. With 361 field images collected in four experimental fields across China between 2010 and 2015 and corresponding manually-labelled dotted annotations, a novel Maize Tassels Counting (MTC) dataset is created and will be released with this paper. To alleviate the in-field challenges, a deep convolutional neural network-based approach termed TasselNet is proposed. TasselNet can achieve good adaptability to in-field variations via modelling the local visual characteristics of field images and regressing the local counts of maize tassels. Extensive results on the MTC dataset demonstrate that TasselNet outperforms other state-of-the-art approaches by large margins and achieves the overall best counting

  15. MLS-Net and SecureParser®: A New Method for Securing and Segregating Network Data

    Directory of Open Access Journals (Sweden)

    Robert A. Johnson

    2008-10-01

    Full Text Available A new method of network security and virtualization is presented which allows the consolidation of multiple network infrastructures dedicated to single security levels or communities of interest onto a single, virtualized network. An overview of the state of the art of network security protocols is presented, including the use of SSL, IPSec, and HAIPE IS, followed by a discussion of the SecureParser® technology and MLS-Net architecture, which in combination allow the virtualization of local network enclaves.

  16. MyProteinNet: build up-to-date protein interaction networks for organisms, tissues and user-defined contexts.

    Science.gov (United States)

    Basha, Omer; Flom, Dvir; Barshir, Ruth; Smoly, Ilan; Tirman, Shoval; Yeger-Lotem, Esti

    2015-07-01

    The identification of the molecular pathways active in specific contexts, such as disease states or drug responses, often requires an extensive view of the potential interactions between a subset of proteins. This view is not easily obtained: it requires the integration of context-specific protein list or expression data with up-to-date data of protein interactions that are typically spread across multiple databases. The MyProteinNet web server allows users to easily create such context-sensitive protein interaction networks. Users can automatically gather and consolidate data from up to 11 different databases to create a generic protein interaction network (interactome). They can score the interactions based on reliability and filter them by user-defined contexts including molecular expression and protein annotation. The output of MyProteinNet includes the generic and filtered interactome files, together with a summary of their network attributes. MyProteinNet is particularly geared toward building human tissue interactomes, by maintaining tissue expression profiles from multiple resources. The ability of MyProteinNet to facilitate the construction of up-to-date, context-specific interactomes and its applicability to 11 different organisms and to tens of human tissues, make it a powerful tool in meaningful analysis of protein networks. MyProteinNet is available at http://netbio.bgu.ac.il/myproteinnet. © The Author(s) 2015. Published by Oxford University Press on behalf of Nucleic Acids Research.

  17. Reconstruction of extended Petri nets from time series data and its application to signal transduction and to gene regulatory networks

    Directory of Open Access Journals (Sweden)

    Marwan Wolfgang

    2011-07-01

    Full Text Available Abstract Background Network inference methods reconstruct mathematical models of molecular or genetic networks directly from experimental data sets. We have previously reported a mathematical method which is exclusively data-driven, does not involve any heuristic decisions within the reconstruction process, and deliveres all possible alternative minimal networks in terms of simple place/transition Petri nets that are consistent with a given discrete time series data set. Results We fundamentally extended the previously published algorithm to consider catalysis and inhibition of the reactions that occur in the underlying network. The results of the reconstruction algorithm are encoded in the form of an extended Petri net involving control arcs. This allows the consideration of processes involving mass flow and/or regulatory interactions. As a non-trivial test case, the phosphate regulatory network of enterobacteria was reconstructed using in silico-generated time-series data sets on wild-type and in silico mutants. Conclusions The new exact algorithm reconstructs extended Petri nets from time series data sets by finding all alternative minimal networks that are consistent with the data. It suggested alternative molecular mechanisms for certain reactions in the network. The algorithm is useful to combine data from wild-type and mutant cells and may potentially integrate physiological, biochemical, pharmacological, and genetic data in the form of a single model.

  18. Validation and correction of rainfall data from the WegenerNet high density network in southeast Austria

    Science.gov (United States)

    O, Sungmin; Foelsche, U.; Kirchengast, G.; Fuchsberger, J.

    2018-01-01

    Eight years of daily rainfall data from WegenerNet were analyzed by comparison with data from Austrian national weather stations. WegenerNet includes 153 ground level weather stations in an area of about 15 km × 20 km in the Feldbach region in southeast Austria. Rainfall has been measured by tipping bucket gauges at 150 stations of the network since the beginning of 2007. Since rain gauge measurements are considered close to true rainfall, there are increasing needs for WegenerNet data for the validation of rainfall data products such as remote sensing based estimates or model outputs. Serving these needs, this paper aims at providing a clearer interpretation on WegenerNet rainfall data for users in hydro-meteorological communities. Five clusters - a cluster consists of one national weather station and its four closest WegenerNet stations - allowed us close comparison of datasets between the stations. Linear regression analysis and error estimation with statistical indices were conducted to quantitatively evaluate the WegenerNet daily rainfall data. It was found that rainfall data between the stations show good linear relationships with an average correlation coefficient (r) of 0.97 , while WegenerNet sensors tend to underestimate rainfall according to the regression slope (0.87). For the five clusters investigated, the bias and relative bias were - 0.97 mm d-1 and - 11.5 % on average (except data from new sensors). The average of bias and relative bias, however, could be reduced by about 80 % through a simple linear regression-slope correction, with the assumption that the underestimation in WegenerNet data was caused by systematic errors. The results from the study have been employed to improve WegenerNet data for user applications so that a new version of the data (v5) is now available at the WegenerNet data portal (www.wegenernet.org).

  19. NIRExpNet: Three-Stream 3D Convolutional Neural Network for Near Infrared Facial Expression Recognition

    Directory of Open Access Journals (Sweden)

    Zhan Wu

    2017-11-01

    Full Text Available Facial expression recognition (FER under active near-infrared (NIR illumination has the advantages of illumination invariance. In this paper, we propose a three-stream 3D convolutional neural network, named as NIRExpNet for NIR FER. The 3D structure of NIRExpNet makes it possible to extract automatically, not just spatial features, but also, temporal features. The design of multiple streams of the NIRExpNet enables it to fuse local and global facial expression features. To avoid over-fitting, the NIRExpNet has a moderate size to suit the Oulu-CASIA NIR facial expression database that is a medium-size database. Experimental results show that the proposed NIRExpNet outperforms some previous state-of-art methods, such as Histogram of Oriented Gradient to 3D (HOG 3D, Local binary patterns from three orthogonal planes (LBP-TOP, deep temporal appearance-geometry network (DTAGN, and adapt 3D Convolutional Neural Networks (3D CNN DAP.

  20. lpNet: a linear programming approach to reconstruct signal transduction networks.

    Science.gov (United States)

    Matos, Marta R A; Knapp, Bettina; Kaderali, Lars

    2015-10-01

    With the widespread availability of high-throughput experimental technologies it has become possible to study hundreds to thousands of cellular factors simultaneously, such as coding- or non-coding mRNA or protein concentrations. Still, extracting information about the underlying regulatory or signaling interactions from these data remains a difficult challenge. We present a flexible approach towards network inference based on linear programming. Our method reconstructs the interactions of factors from a combination of perturbation/non-perturbation and steady-state/time-series data. We show both on simulated and real data that our methods are able to reconstruct the underlying networks fast and efficiently, thus shedding new light on biological processes and, in particular, into disease's mechanisms of action. We have implemented the approach as an R package available through bioconductor. This R package is freely available under the Gnu Public License (GPL-3) from bioconductor.org (http://bioconductor.org/packages/release/bioc/html/lpNet.html) and is compatible with most operating systems (Windows, Linux, Mac OS) and hardware architectures. bettina.knapp@helmholtz-muenchen.de Supplementary data are available at Bioinformatics online. © The Author 2015. Published by Oxford University Press. All rights reserved. For Permissions, please e-mail: journals.permissions@oup.com.

  1. Photonics-oriented data transmission network for the KM3NeT prototype detector

    Energy Technology Data Exchange (ETDEWEB)

    Hoek, M. van der; Mos, S.; Schmelling, J.W.; Hogenbirk, J.; Heine, E.; Jansweijer, P.; Kieft, G.; Peek, H.; Timmer, P. [Nikhef, Science Park 105, 1098 XG Amsterdam (Netherlands); Wolf, E. de, E-mail: e.dewolf@nikhef.nl [Nikhef, Science Park 105, 1098 XG Amsterdam (Netherlands); University of Amsterdam, Science Park 904, 1098 XH Amsterdam (Netherlands); Zwart, A. [Nikhef, Science Park 105, 1098 XG Amsterdam (Netherlands)

    2013-10-11

    The design of the readout and data acquisition system of the future KM3NeT neutrino telescope employs 10 Gbps photonic technologies for data transmission to shore. The photonic architecture can handle standard transmission protocols. The generic scheme is based on DWDM technology using lasers on shore and optical modulators in each of the 12,800 Digital Optical Modules arranged on several hundred vertical detection units anchored to the seabed. Each module will house 31 photomultipliers together with auxiliary instrumentation and readout electronics. A 100 km electro-optical fibre cable will connect the optical modules to the store. The readout system will guarantee an individual optical connection between each optical module and the shore. A small-scale prototype of a detection unit with four optical modules is in a realization phase and will allow for in situ testing of the data transmission network. We will present results of laboratory tests of the photonics-oriented transmission layer of the network that have been realized for the prototype detection unit.

  2. International Network of Chronic Kidney Disease cohort studies (iNET-CKD): a global network of chronic kidney disease cohorts.

    Science.gov (United States)

    Dienemann, Thomas; Fujii, Naohiko; Orlandi, Paula; Nessel, Lisa; Furth, Susan L; Hoy, Wendy E; Matsuo, Seiichi; Mayer, Gert; Methven, Shona; Schaefer, Franz; Schaeffner, Elke S; Solá, Laura; Stengel, Bénédicte; Wanner, Christoph; Zhang, Luxia; Levin, Adeera; Eckardt, Kai-Uwe; Feldman, Harold I

    2016-09-02

    Chronic kidney disease (CKD) is a global health burden, yet it is still underrepresented within public health agendas in many countries. Studies focusing on the natural history of CKD are challenging to design and conduct, because of the long time-course of disease progression, a wide variation in etiologies, and a large amount of clinical variability among individuals with CKD. With the difference in health-related behaviors, healthcare delivery, genetics, and environmental exposures, this variability is greater across countries than within one locale and may not be captured effectively in a single study. Studies were invited to join the network. Prerequisites for membership included: 1) observational designs with a priori hypotheses and defined study objectives, patient-level information, prospective data acquisition and collection of bio-samples, all focused on predialysis CKD patients; 2) target sample sizes of 1,000 patients for adult cohorts and 300 for pediatric cohorts; and 3) minimum follow-up of three years. Participating studies were surveyed regarding design, data, and biosample resources. Twelve prospective cohort studies and two registries covering 21 countries were included. Participants age ranges from >2 to >70 years at inclusion, CKD severity ranges from stage 2 to stage 5. Patient data and biosamples (not available in the registry studies) are measured yearly or biennially. Many studies included multiple ethnicities; cohort size ranges from 400 to more than 13,000 participants. Studies' areas of emphasis all include but are not limited to renal outcomes, such as progression to ESRD and death. iNET-CKD (International Network of CKD cohort studies) was established, to promote collaborative research, foster exchange of expertise, and create opportunities for research training. Participating studies have many commonalities that will facilitate comparative research; however, we also observed substantial differences. The diversity we observed across

  3. ONLINE SOCIAL NETWORKS AS A TOOL FOR THE PROMOTION OF PHYSICAL ACTIVITY AND HEALTH: A RESOURCE SCIENTIFICALLY FEW EXPLORED

    Directory of Open Access Journals (Sweden)

    Arían Ramón Aladro Gonzalvo

    2015-06-01

    Full Text Available Due to the great impact  that are exerting the networks in society, it is crucial to know the features that distinguish online social networks bringing together users interested in receiving information and resources to improve or maintain the body in shape. This article aims to comment on the limited research interested in studying the features and particularities of online communities that provide information, advice and support in the execution, performance and promotion of the health and fitness activities. Particularly, it underline about the necessity to know of networks structure, user profiles and peer-to-peer interaction, sort of membership, mechanisms of communication, representation of the body image and patterns of association. Likewise, the size of the support networks, telepresence, technology acceptance and perceived risk on the network. Besides, we recommend exploring two Fitness-related online social networks. Finally, it makes known the recurring problems in the analysis in order to characterize psychosocial and communicative aspects of users in the virtual environment.

  4. S-net project: Construction of large scale seafloor observatory network for tsunamis and earthquakes in Japan

    Science.gov (United States)

    Mochizuki, M.; Kanazawa, T.; Uehira, K.; Shimbo, T.; Shiomi, K.; Kunugi, T.; Aoi, S.; Matsumoto, T.; Sekiguchi, S.; Yamamoto, N.; Takahashi, N.; Shinohara, M.; Yamada, T.

    2016-12-01

    National Research Institute for Earth Science and Disaster Resilience ( NIED ) has launched the project of constructing an observatory network for tsunamis and earthquakes on the seafloor. The observatory network was named "S-net, Seafloor Observation Network for Earthquakes and Tsunamis along the Japan Trench". The S-net consists of 150 seafloor observatories which are connected in line with submarine optical cables. The total length of submarine optical cable is about 5,700 km. The S-net system extends along Kuril and Japan trenches around Japan islands from north to south covering the area between southeast off island of Hokkaido and off the Boso Peninsula, Chiba Prefecture. The project has been financially supported by MEXT Japan. An observatory package is 34cm in diameter and 226cm long. Each observatory equips two units of a high sensitive water-depth sensor as a tsunami meter and four sets of three-component seismometers. The water-depth sensor has measurement resolution of sub-centimeter level. Combination of multiple seismometers secures wide dynamic range and robustness of the observation that are needed for early earthquake warning. The S-net is composed of six segment networks that consists of about 25 observatories and 800-1,600km length submarine optical cable. Five of six segment networks except the one covering the outer rise area of the Japan Trench has been already installed. The data from the observatories on those five segment networks are being transferred to the data center at NIED on a real-time basis, and then verification of data integrity are being carried out at the present moment. Installation of the last segment network of the S-net, that is, the outer rise one is scheduled to be finished within FY2016. Full-scale operation of the S-net will start at FY2017. We will report construction and operation of the S-net submarine cable system as well as the outline of the obtained data in this presentation.

  5. Modeling the Metabolism of Arabidopsis thaliana: Application of Network Decomposition and Network Reduction in the Context of Petri Nets.

    Science.gov (United States)

    Koch, Ina; Nöthen, Joachim; Schleiff, Enrico

    2017-01-01

    Motivation:Arabidopsis thaliana is a well-established model system for the analysis of the basic physiological and metabolic pathways of plants. Nevertheless, the system is not yet fully understood, although many mechanisms are described, and information for many processes exists. However, the combination and interpretation of the large amount of biological data remain a big challenge, not only because data sets for metabolic paths are still incomplete. Moreover, they are often inconsistent, because they are coming from different experiments of various scales, regarding, for example, accuracy and/or significance. Here, theoretical modeling is powerful to formulate hypotheses for pathways and the dynamics of the metabolism, even if the biological data are incomplete. To develop reliable mathematical models they have to be proven for consistency. This is still a challenging task because many verification techniques fail already for middle-sized models. Consequently, new methods, like decomposition methods or reduction approaches, are developed to circumvent this problem. Methods: We present a new semi-quantitative mathematical model of the metabolism of Arabidopsis thaliana. We used the Petri net formalism to express the complex reaction system in a mathematically unique manner. To verify the model for correctness and consistency we applied concepts of network decomposition and network reduction such as transition invariants, common transition pairs, and invariant transition pairs. Results: We formulated the core metabolism of Arabidopsis thaliana based on recent knowledge from literature, including the Calvin cycle, glycolysis and citric acid cycle, glyoxylate cycle, urea cycle, sucrose synthesis, and the starch metabolism. By applying network decomposition and reduction techniques at steady-state conditions, we suggest a straightforward mathematical modeling process. We demonstrate that potential steady-state pathways exist, which provide the fixed carbon to nearly

  6. Modeling the Metabolism of Arabidopsis thaliana: Application of Network Decomposition and Network Reduction in the Context of Petri Nets

    Directory of Open Access Journals (Sweden)

    Ina Koch

    2017-06-01

    Full Text Available Motivation:Arabidopsis thaliana is a well-established model system for the analysis of the basic physiological and metabolic pathways of plants. Nevertheless, the system is not yet fully understood, although many mechanisms are described, and information for many processes exists. However, the combination and interpretation of the large amount of biological data remain a big challenge, not only because data sets for metabolic paths are still incomplete. Moreover, they are often inconsistent, because they are coming from different experiments of various scales, regarding, for example, accuracy and/or significance. Here, theoretical modeling is powerful to formulate hypotheses for pathways and the dynamics of the metabolism, even if the biological data are incomplete. To develop reliable mathematical models they have to be proven for consistency. This is still a challenging task because many verification techniques fail already for middle-sized models. Consequently, new methods, like decomposition methods or reduction approaches, are developed to circumvent this problem.Methods: We present a new semi-quantitative mathematical model of the metabolism of Arabidopsis thaliana. We used the Petri net formalism to express the complex reaction system in a mathematically unique manner. To verify the model for correctness and consistency we applied concepts of network decomposition and network reduction such as transition invariants, common transition pairs, and invariant transition pairs.Results: We formulated the core metabolism of Arabidopsis thaliana based on recent knowledge from literature, including the Calvin cycle, glycolysis and citric acid cycle, glyoxylate cycle, urea cycle, sucrose synthesis, and the starch metabolism. By applying network decomposition and reduction techniques at steady-state conditions, we suggest a straightforward mathematical modeling process. We demonstrate that potential steady-state pathways exist, which provide the

  7. NetSeed: a network-based reverse-ecology tool for calculating the metabolic interface of an organism with its environment.

    Science.gov (United States)

    Carr, Rogan; Borenstein, Elhanan

    2012-03-01

    NetSeed is a web tool and Perl module for analyzing the topology of metabolic networks and calculating the set of exogenously acquired compounds. NetSeed is based on the seed detection algorithm, developed and validated in previous studies. The NetSeed web-based tool, open-source Perl module, examples and documentation are freely available online at: http://depts.washington.edu/elbogs/NetSeed.

  8. ENERGY-NET (Energy, Environment and Society Learning Network): Enhancing opportunities for learning using an Earth systems science framework

    Science.gov (United States)

    Elliott, E. M.; Bain, D. J.; Divers, M. T.; Crowley, K. J.; Povis, K.; Scardina, A.; Steiner, M.

    2012-12-01

    We describe a newly funded collaborative NSF initiative, ENERGY-NET (Energy, Environment and Society Learning Network), that brings together the Carnegie Museum of Natural History (CMNH) with the Learning Science and Geoscience research strengths at the University of Pittsburgh. ENERGY-NET aims to create rich opportunities for participatory learning and public education in the arena of energy, the environment, and society using an Earth systems science framework. We build upon a long-established teen docent program at CMNH and to form Geoscience Squads comprised of underserved teens. Together, the ENERGY-NET team, including museum staff, experts in informal learning sciences, and geoscientists spanning career stage (undergraduates, graduate students, faculty) provides inquiry-based learning experiences guided by Earth systems science principles. Together, the team works with Geoscience Squads to design "Exploration Stations" for use with CMNH visitors that employ an Earth systems science framework to explore the intersecting lenses of energy, the environment, and society. The goals of ENERGY-NET are to: 1) Develop a rich set of experiential learning activities to enhance public knowledge about the complex dynamics between Energy, Environment, and Society for demonstration at CMNH; 2) Expand diversity in the geosciences workforce by mentoring underrepresented teens, providing authentic learning experiences in earth systems science and life skills, and providing networking opportunities with geoscientists; and 3) Institutionalize ENERGY-NET collaborations among geosciences expert, learning researchers, and museum staff to yield long-term improvements in public geoscience education and geoscience workforce recruiting.

  9. Analysis of Few-Mode Multi-Core Fiber Splice Behavior Using an Optical Vector Network Analyzer

    DEFF Research Database (Denmark)

    Rommel, Simon; Mendinueta, Jose Manuel Delgado; Klaus, Werner

    2017-01-01

    The behavior of splices in a 3-mode 36-core fiber is analyzed using optical vector network analysis. Time-domain response analysis confirms splices may cause significant mode-mixing, while frequency-domain analysis shows splices may affect system level mode-dependent loss both positively...

  10. Green Networking in Cellular HetNets: A Unified Radio Resource Management Framework with Base Station ON/OFF Switching

    KAUST Repository

    Ghazzai, Hakim

    2016-12-07

    In this paper, the problem of energy efficiency in cellular heterogeneous networks (HetNets) is investigated using radio resource and power management combined with the base station (BS) ON/OFF switching. The objective is to minimize the total power consumption of the network while satisfying the quality of service (QoS) requirements of each connected user. We consider the case of co-existing macrocell BS, small cell BSs, and private femtocell access points (FAPs). Three different network scenarios are investigated, depending on the status of the FAPs, i.e., HetNets without FAPs, HetNets with closed FAPs, and HetNets with semi-closed FAPs. A unified framework is proposed to simultaneously allocate spectrum resources to users in an energy efficient manner and switch off redundant small cell BSs. The high complexity dual decomposition technique is employed to achieve optimal solutions for the problem. A low complexity iterative algorithm is also proposed and its performances are compared to those of the optimal technique. The particularly interesting case of semi-closed FAPs, in which the FAPs accept to serve external users, achieves the highest energy efficiency due to increased degrees of freedom. In this paper, a cooperation scheme between FAPs and mobile operator is also investigated. The incentives for FAPs, e.g., renewable energy sharing and roaming prices, enabling cooperation are discussed to be considered as a useful guideline for inter-operator agreements.

  11. Windows .NET Network Distributed Basic Local Alignment Search Toolkit (W.ND-BLAST)

    Science.gov (United States)

    Dowd, Scot E; Zaragoza, Joaquin; Rodriguez, Javier R; Oliver, Melvin J; Payton, Paxton R

    2005-01-01

    Background BLAST is one of the most common and useful tools for Genetic Research. This paper describes a software application we have termed Windows .NET Distributed Basic Local Alignment Search Toolkit (W.ND-BLAST), which enhances the BLAST utility by improving usability, fault recovery, and scalability in a Windows desktop environment. Our goal was to develop an easy to use, fault tolerant, high-throughput BLAST solution that incorporates a comprehensive BLAST result viewer with curation and annotation functionality. Results W.ND-BLAST is a comprehensive Windows-based software toolkit that targets researchers, including those with minimal computer skills, and provides the ability increase the performance of BLAST by distributing BLAST queries to any number of Windows based machines across local area networks (LAN). W.ND-BLAST provides intuitive Graphic User Interfaces (GUI) for BLAST database creation, BLAST execution, BLAST output evaluation and BLAST result exportation. This software also provides several layers of fault tolerance and fault recovery to prevent loss of data if nodes or master machines fail. This paper lays out the functionality of W.ND-BLAST. W.ND-BLAST displays close to 100% performance efficiency when distributing tasks to 12 remote computers of the same performance class. A high throughput BLAST job which took 662.68 minutes (11 hours) on one average machine was completed in 44.97 minutes when distributed to 17 nodes, which included lower performance class machines. Finally, there is a comprehensive high-throughput BLAST Output Viewer (BOV) and Annotation Engine components, which provides comprehensive exportation of BLAST hits to text files, annotated fasta files, tables, or association files. Conclusion W.ND-BLAST provides an interactive tool that allows scientists to easily utilizing their available computing resources for high throughput and comprehensive sequence analyses. The install package for W.ND-BLAST is freely downloadable from

  12. From social network to safety net: Dementia-friendly communities in rural northern Ontario.

    Science.gov (United States)

    Wiersma, Elaine C; Denton, Alison

    2016-01-01

    Dementia-friendly communities, as communities that enable people with dementia to remain involved and active and have control over their lives for as long as possible, centrally involve social support and social networks for people living with dementia. The purpose of this research was to explore and understand the context of dementia in rural northern communities in Ontario with an emphasis on understanding how dementia friendly the communities were. Using qualitative methods, interviews were conducted with a total of 71 participants, including 37 health service providers, 15 care partners, 2 people living with dementia and 17 other community members such as local business owners, volunteers, local leaders, friends and neighbours. The strong social networks and informal social support that were available to people living with dementia, and the strong commitment by community members, families and health care providers to support people with dementia, were considered a significant asset to the community. A culture of care and looking out for each other contributed to the social support provided. In particular, the familiarity with others provided a supportive community environment. People with dementia were looked out for by community members, and continued to remain connected in their communities. The social support provided in these communities demonstrated that although fragile, this type of support offered somewhat of a safety net for individuals living with dementia. This work provides important insights into the landscape of dementia in rural northern Ontario communities, and the strong social supports that sustain people with dementia remaining in the communities. © The Author(s) 2013.

  13. Auto-context Convolutional Neural Network (Auto-Net) for Brain Extraction in Magnetic Resonance Imaging.

    Science.gov (United States)

    Salehi, Seyed Sadegh Mohseni; Erdogmus, Deniz; Gholipour, Ali

    2017-06-28

    Brain extraction or whole brain segmentation is an important first step in many of the neuroimage analysis pipelines. The accuracy and robustness of brain extraction, therefore, is crucial for the accuracy of the entire brain analysis process. State-of-the-art brain extraction techniques rely heavily on the accuracy of alignment or registration between brain atlases and query brain anatomy, and/or make assumptions about the image geometry; therefore have limited success when these assumptions do not hold or image registration fails. With the aim of designing an accurate, learning-based, geometry-independent and registration-free brain extraction tool in this study, we present a technique based on an auto-context convolutional neural network (CNN), in which intrinsic local and global image features are learned through 2D patches of different window sizes. We consider two different architectures: 1) a voxelwise approach based on three parallel 2D convolutional pathways for three different directions (axial, coronal, and sagittal) that implicitly learn 3D image information without the need for computationally expensive 3D convolutions, and 2) a fully convolutional network based on the U-net architecture. Posterior probability maps generated by the networks are used iteratively as context information along with the original image patches to learn the local shape and connectedness of the brain to extract it from non-brain tissue. The brain extraction results we have obtained from our CNNs are superior to the recently reported results in the literature on two publicly available benchmark datasets, namely LPBA40 and OASIS, in which we obtained Dice overlap coefficients of 97.73% and 97.62%, respectively. Significant improvement was achieved via our auto-context algorithm. Furthermore, we evaluated the performance of our algorithm in the challenging problem of extracting arbitrarily-oriented fetal brains in reconstructed fetal brain magnetic resonance imaging (MRI

  14. MercNet: A national monitoring network to assess responses to changing mercury emissions in the United States

    Science.gov (United States)

    Schmeltz, D.; Evers, D.C.; Driscoll, C.T.; Artz, R.; Cohen, M.; Gay, D.; Haeuber, R.; Krabbenhoft, D.P.; Mason, R.; Morris, K.; Wiener, J.G.

    2011-01-01

    A partnership of federal and state agencies, tribes, industry, and scientists from academic research and environmental organizations is establishing a national, policy-relevant mercury monitoring network, called MercNet, to address key questions concerning changes in anthropogenic mercury emissions and deposition, associated linkages to ecosystem effects, and recovery from mercury contamination. This network would quantify mercury in the atmosphere, land, water, and biota in terrestrial, freshwater, and coastal ecosystems to provide a national scientific capability for evaluating the benefits and effectiveness of emission controls. Program development began with two workshops, convened to establish network goals, to select key indicators for monitoring, to propose a geographic network of monitoring sites, and to design a monitoring plan. MercNet relies strongly on multi-institutional partnerships to secure the capabilities and comprehensive data that are needed to develop, calibrate, and refine predictive mercury models and to guide effective management. Ongoing collaborative efforts include the: (1) development of regional multi-media databases on mercury in the Laurentian Great Lakes, northeastern United States, and eastern Canada; (2) syntheses and reporting of these data for the scientific and policy communities; and (3) evaluation of potential monitoring sites. The MercNet approach could be applied to the development of other monitoring programs, such as emerging efforts to monitor and assess global mercury emission controls. ?? 2011 Springer Science+Business Media, LLC (outside the USA).

  15. Prediction of Disease Causing Non-Synonymous SNPs by the Artificial Neural Network Predictor NetDiseaseSNP

    DEFF Research Database (Denmark)

    Johansen, Morten Bo; Gonzalez-Izarzugaza, Jose Maria; Brunak, Søren

    2013-01-01

    We have developed a sequence conservation-based artificial neural network predictor called NetDiseaseSNP which classifies nsSNPs as disease-causing or neutral. Our method uses the excellent alignment generation algorithm of SIFT to identify related sequences and a combination of 31 features...... assessing sequence conservation and the predicted surface accessibility to produce a single score which can be used to rank nsSNPs based on their potential to cause disease. NetDiseaseSNP classifies successfully disease-causing and neutral mutations. In addition, we show that NetDiseaseSNP discriminates...... cancer driver and passenger mutations satisfactorily. Our method outperforms other state-of-the-art methods on several disease/neutral datasets as well as on cancer driver/passenger mutation datasets and can thus be used to pinpoint and prioritize plausible disease candidates among nsSNPs for further...

  16. Local Area Network: Community Involvement, Social Capital, and Glocalization at NetU

    Science.gov (United States)

    Trevett-Smith, Matthew D.

    2010-01-01

    Ethnographic and interview data from a long-term study of "NetU," a wired community and college, are used to investigate the effects of computer-mediated communication on social relationships. During the course of this research "LAN" residents of NetU are compared with a similar group of non-LAN residents who lived in the same neighborhood, but…

  17. Windows .NET Network Distributed Basic Local Alignment Search Toolkit (W.ND-BLAST

    Directory of Open Access Journals (Sweden)

    Oliver Melvin J

    2005-04-01

    Full Text Available Abstract Background BLAST is one of the most common and useful tools for Genetic Research. This paper describes a software application we have termed Windows .NET Distributed Basic Local Alignment Search Toolkit (W.ND-BLAST, which enhances the BLAST utility by improving usability, fault recovery, and scalability in a Windows desktop environment. Our goal was to develop an easy to use, fault tolerant, high-throughput BLAST solution that incorporates a comprehensive BLAST result viewer with curation and annotation functionality. Results W.ND-BLAST is a comprehensive Windows-based software toolkit that targets researchers, including those with minimal computer skills, and provides the ability increase the performance of BLAST by distributing BLAST queries to any number of Windows based machines across local area networks (LAN. W.ND-BLAST provides intuitive Graphic User Interfaces (GUI for BLAST database creation, BLAST execution, BLAST output evaluation and BLAST result exportation. This software also provides several layers of fault tolerance and fault recovery to prevent loss of data if nodes or master machines fail. This paper lays out the functionality of W.ND-BLAST. W.ND-BLAST displays close to 100% performance efficiency when distributing tasks to 12 remote computers of the same performance class. A high throughput BLAST job which took 662.68 minutes (11 hours on one average machine was completed in 44.97 minutes when distributed to 17 nodes, which included lower performance class machines. Finally, there is a comprehensive high-throughput BLAST Output Viewer (BOV and Annotation Engine components, which provides comprehensive exportation of BLAST hits to text files, annotated fasta files, tables, or association files. Conclusion W.ND-BLAST provides an interactive tool that allows scientists to easily utilizing their available computing resources for high throughput and comprehensive sequence analyses. The install package for W.ND-BLAST is

  18. A reliable energy-efficient multi-level routing algorithm for wireless sensor networks using fuzzy Petri nets.

    Science.gov (United States)

    Yu, Zhenhua; Fu, Xiao; Cai, Yuanli; Vuran, Mehmet C

    2011-01-01

    A reliable energy-efficient multi-level routing algorithm in wireless sensor networks is proposed. The proposed algorithm considers the residual energy, number of the neighbors and centrality of each node for cluster formation, which is critical for well-balanced energy dissipation of the network. In the algorithm, a knowledge-based inference approach using fuzzy Petri nets is employed to select cluster heads, and then the fuzzy reasoning mechanism is used to compute the degree of reliability in the route sprouting tree from cluster heads to the base station. Finally, the most reliable route among the cluster heads can be constructed. The algorithm not only balances the energy load of each node but also provides global reliability for the whole network. Simulation results demonstrate that the proposed algorithm effectively prolongs the network lifetime and reduces the energy consumption.

  19. Excellence networks in science: A web-based application (www.excellence-networks.net) for the identification of institutions collaborating successfully

    CERN Document Server

    Bornmann, Lutz; Anegon, Felix de Moya; Mutz, Ruediger

    2015-01-01

    Network techniques have been used to visualize bibliometric data for many years. In this study we present an application which can be accessed via www.excellence-networks.net and which represents networks of scientific institutions worldwide. The application is based on papers (articles, reviews and conference papers) published between 2007 and 2011. It uses the same data on which the SCImago Institutions Ranking is based (Scopus data from Elsevier). Using this data, institutional networks have been estimated with statistical models (Bayesian multilevel logistic regression) for a number of Scopus subject areas. Within single subject areas, we have investigated and visualized how successfully overall an institution (reference institution) has collaborated (compared to all the other institutions in a subject area), and with which other institutions (network institutions) an institution (reference institution) has collaborated particularly successfully. The "best paper rate" (statistically estimated) was used as...

  20. Revenue-Maximizing Radio Access Technology Selection with Net Neutrality Compliance in Heterogeneous Wireless Networks

    OpenAIRE

    Khloussy, Elissar; Jiang, Yuming

    2018-01-01

    The net neutrality principle states that users should have equal access to all Internet content and that Internet Service Providers (ISPs) should not practice differentiated treatment on any of the Internet traffic. While net neutrality aims to restrain any kind of discrimination, it also grants exemption to a certain category of traffic known as specialized services (SS), by allowing the ISP to dedicate part of the resources for the latter. In this work, we consider a heterogeneous LTE/WiFi ...

  1. The PluriNetWork: an electronic representation of the network underlying pluripotency in mouse, and its applications.

    Science.gov (United States)

    Som, Anup; Harder, Clemens; Greber, Boris; Siatkowski, Marcin; Paudel, Yogesh; Warsow, Gregor; Cap, Clemens; Schöler, Hans; Fuellen, Georg

    2010-12-10

    Analysis of the mechanisms underlying pluripotency and reprogramming would benefit substantially from easy access to an electronic network of genes, proteins and mechanisms. Moreover, interpreting gene expression data needs to move beyond just the identification of the up-/downregulation of key genes and of overrepresented processes and pathways, towards clarifying the essential effects of the experiment in molecular terms. We have assembled a network of 574 molecular interactions, stimulations and inhibitions, based on a collection of research data from 177 publications until June 2010, involving 274 mouse genes/proteins, all in a standard electronic format, enabling analyses by readily available software such as Cytoscape and its plugins. The network includes the core circuit of Oct4 (Pou5f1), Sox2 and Nanog, its periphery (such as Stat3, Klf4, Esrrb, and c-Myc), connections to upstream signaling pathways (such as Activin, WNT, FGF, BMP, Insulin, Notch and LIF), and epigenetic regulators as well as some other relevant genes/proteins, such as proteins involved in nuclear import/export. We describe the general properties of the network, as well as a Gene Ontology analysis of the genes included. We use several expression data sets to condense the network to a set of network links that are affected in the course of an experiment, yielding hypotheses about the underlying mechanisms. We have initiated an electronic data repository that will be useful to understand pluripotency and to facilitate the interpretation of high-throughput data. To keep up with the growth of knowledge on the fundamental processes of pluripotency and reprogramming, we suggest to combine Wiki and social networking software towards a community curation system that is easy to use and flexible, and tailored to provide a benefit for the scientist, and to improve communication and exchange of research results. A PluriNetWork tutorial is available at http://www.ibima.med.uni-rostock.de/IBIMA/PluriNetWork/.

  2. Improving 1D Site Specific Velocity Profiles for the Kik-Net Network

    Science.gov (United States)

    Holt, James; Edwards, Benjamin; Pilz, Marco; Fäh, Donat; Rietbrock, Andreas

    2017-04-01

    recorded data from the Kik-Net network. First, using a reliable subset of sites, the empirical surface to borehole (S/B) ratio is calculated in the frequency domain using all events recorded at that site. In a subsequent step, we use numerical simulation to produce 1D SH transfer function curves using a suite of stochastic velocity models. Comparing the resulting amplification with the empirical S/B ratio we find optimal 1D velocity models and their uncertainty. The method will be tested to determine the level of initial information required to obtain a reliable Vs profile (e.g., starting Vs model, only Vs30, site-class, H/V ratio etc.) and then applied and tested against data from other regions using site-to-reference or empirical spectral model amplification.

  3. ImpNet: Programming Software-Defied Networks Using Imperative Techniques

    OpenAIRE

    El-Zawawy, Mohamed A.; AlSalem, Adel I.

    2014-01-01

    Software and hardware components are basic parts of modern networks. However the software compo- nent is typical sealed and function-oriented. Therefore it is very difficult to modify these components. This badly affected networking innovations. Moreover, this resulted in network policies having complex interfaces that are not user-friendly and hence resulted in huge and complicated flow tables on physical switches of networks. This greatly degrades the network performance in many cases. Soft...

  4. Net benefits: assessing the effectiveness of clinical networks in Australia through qualitative methods

    Science.gov (United States)

    2012-01-01

    Background In the 21st century, government and industry are supplementing hierarchical, bureaucratic forms of organization with network forms, compatible with principles of devolved governance and decentralization of services. Clinical networks are employed as a key health policy approach to engage clinicians in improving patient care in Australia. With significant investment in such networks in Australia and internationally, it is important to assess their effectiveness and sustainability as implementation mechanisms. Methods In two purposively selected, musculoskeletal clinical networks, members and stakeholders were interviewed to ascertain their perceptions regarding key factors relating to network effectiveness and sustainability. We adopted a three-level approach to evaluating network effectiveness: at the community, network, and member levels, across the network lifecycle. Results Both networks studied are advisory networks displaying characteristics of the ‘enclave’ type of non-hierarchical network. They are hybrids of the mandated and natural network forms. In the short term, at member level, both networks were striving to create connectivity and collaboration of members. Over the short to medium term, at network level, both networks applied multi-disciplinary engagement in successfully developing models of care as key outputs, and disseminating information to stakeholders. In the long term, at both community and network levels, stakeholders would measure effectiveness by the broader statewide influence of the network in changing and improving practice. At community level, in the long term, stakeholders acknowledged both networks had raised the profile, and provided a ‘voice’ for musculoskeletal conditions, evidencing some progress with implementation of the network mission while pursuing additional implementation strategies. Conclusions This research sheds light on stakeholders’ perceptions of assessing clinical network effectiveness at

  5. Net benefits: assessing the effectiveness of clinical networks in Australia through qualitative methods

    Directory of Open Access Journals (Sweden)

    Cunningham Frances C

    2012-11-01

    Full Text Available Abstract Background In the 21st century, government and industry are supplementing hierarchical, bureaucratic forms of organization with network forms, compatible with principles of devolved governance and decentralization of services. Clinical networks are employed as a key health policy approach to engage clinicians in improving patient care in Australia. With significant investment in such networks in Australia and internationally, it is important to assess their effectiveness and sustainability as implementation mechanisms. Methods In two purposively selected, musculoskeletal clinical networks, members and stakeholders were interviewed to ascertain their perceptions regarding key factors relating to network effectiveness and sustainability. We adopted a three-level approach to evaluating network effectiveness: at the community, network, and member levels, across the network lifecycle. Results Both networks studied are advisory networks displaying characteristics of the ‘enclave’ type of non-hierarchical network. They are hybrids of the mandated and natural network forms. In the short term, at member level, both networks were striving to create connectivity and collaboration of members. Over the short to medium term, at network level, both networks applied multi-disciplinary engagement in successfully developing models of care as key outputs, and disseminating information to stakeholders. In the long term, at both community and network levels, stakeholders would measure effectiveness by the broader statewide influence of the network in changing and improving practice. At community level, in the long term, stakeholders acknowledged both networks had raised the profile, and provided a ‘voice’ for musculoskeletal conditions, evidencing some progress with implementation of the network mission while pursuing additional implementation strategies. Conclusions This research sheds light on stakeholders’ perceptions of assessing clinical

  6. Self-Management of Hybrid Networks: Can We Trust NetFlow Data?

    NARCIS (Netherlands)

    Fioreze, Tiago; Granville, Lisandro Zambenedetti; Granville, L.; Pras, Aiko; Sperotto, Anna; Sadre, R.

    2009-01-01

    Network measurement provides vital information on the health of managed networks. The collection of network information can be used for several reasons (e.g., accounting or security) depending on the purpose the collected data will be used for. At the University of Twente (UT), an automatic decision

  7. TopologyNet: Topology based deep convolutional and multi-task neural networks for biomolecular property predictions.

    Directory of Open Access Journals (Sweden)

    Zixuan Cang

    2017-07-01

    Full Text Available Although deep learning approaches have had tremendous success in image, video and audio processing, computer vision, and speech recognition, their applications to three-dimensional (3D biomolecular structural data sets have been hindered by the geometric and biological complexity. To address this problem we introduce the element-specific persistent homology (ESPH method. ESPH represents 3D complex geometry by one-dimensional (1D topological invariants and retains important biological information via a multichannel image-like representation. This representation reveals hidden structure-function relationships in biomolecules. We further integrate ESPH and deep convolutional neural networks to construct a multichannel topological neural network (TopologyNet for the predictions of protein-ligand binding affinities and protein stability changes upon mutation. To overcome the deep learning limitations from small and noisy training sets, we propose a multi-task multichannel topological convolutional neural network (MM-TCNN. We demonstrate that TopologyNet outperforms the latest methods in the prediction of protein-ligand binding affinities, mutation induced globular protein folding free energy changes, and mutation induced membrane protein folding free energy changes.weilab.math.msu.edu/TDL/.

  8. TopologyNet: Topology based deep convolutional and multi-task neural networks for biomolecular property predictions

    Science.gov (United States)

    2017-01-01

    Although deep learning approaches have had tremendous success in image, video and audio processing, computer vision, and speech recognition, their applications to three-dimensional (3D) biomolecular structural data sets have been hindered by the geometric and biological complexity. To address this problem we introduce the element-specific persistent homology (ESPH) method. ESPH represents 3D complex geometry by one-dimensional (1D) topological invariants and retains important biological information via a multichannel image-like representation. This representation reveals hidden structure-function relationships in biomolecules. We further integrate ESPH and deep convolutional neural networks to construct a multichannel topological neural network (TopologyNet) for the predictions of protein-ligand binding affinities and protein stability changes upon mutation. To overcome the deep learning limitations from small and noisy training sets, we propose a multi-task multichannel topological convolutional neural network (MM-TCNN). We demonstrate that TopologyNet outperforms the latest methods in the prediction of protein-ligand binding affinities, mutation induced globular protein folding free energy changes, and mutation induced membrane protein folding free energy changes. Availability: weilab.math.msu.edu/TDL/ PMID:28749969

  9. Photonics-oriented data transmission network for the KM3NeT prototype detector

    NARCIS (Netherlands)

    van der Hoek, M.M.; Mos, S.; Schmelling, J.W.; Hogenbirk, J.; Heine, E.; Jansweijer, P.; Kieft, G.; Peek, H.; Timmer, P.; de Wolf, E.

    2013-01-01

    The design of the readout and data acquisition system of the future KM3NeT neutrino telescope employs 10 Gbps photonic technologies for data transmission to shore. The photonic architecture can handle standard transmission protocols. The generic scheme is based on DWDM technology using lasers on

  10. A Net of Friends: Investigating Friendship by Integrating Attachment Theory and Social Network Analysis.

    Science.gov (United States)

    Gillath, Omri; Karantzas, Gery C; Selcuk, Emre

    2017-11-01

    The current article focuses on attachment style-an individual difference widely studied in the field of close relationships-and its application to the study of social networks. Specifically, we investigated whether attachment style predicts perception and management of social networks. In Study 1, we examined the associations of attachment style with perceptions of network tie strength and multiplexity. In Studies 2a and 2b, we investigated the association between attachment style and network management skills (initiating, maintaining, and dissolving ties) and whether network management skills mediated the associations of attachment style with network tie strength and multiplexity. In Study 3, experimentally enhancing attachment security made people more likely to initiate and less likely to dissolve social ties (for the latter, especially among those high on avoidance or anxiety). As for maintenance, security priming also increased maintenance; however, mainly among people high on attachment anxiety or low on attachment avoidance.

  11. H3ABioNet, a sustainable pan-African bioinformatics network for human heredity and health in Africa

    Science.gov (United States)

    Mulder, Nicola J.; Adebiyi, Ezekiel; Alami, Raouf; Benkahla, Alia; Brandful, James; Doumbia, Seydou; Everett, Dean; Fadlelmola, Faisal M.; Gaboun, Fatima; Gaseitsiwe, Simani; Ghazal, Hassan; Hazelhurst, Scott; Hide, Winston; Ibrahimi, Azeddine; Jaufeerally Fakim, Yasmina; Jongeneel, C. Victor; Joubert, Fourie; Kassim, Samar; Kayondo, Jonathan; Kumuthini, Judit; Lyantagaye, Sylvester; Makani, Julie; Mansour Alzohairy, Ahmed; Masiga, Daniel; Moussa, Ahmed; Nash, Oyekanmi; Ouwe Missi Oukem-Boyer, Odile; Owusu-Dabo, Ellis; Panji, Sumir; Patterton, Hugh; Radouani, Fouzia; Sadki, Khalid; Seghrouchni, Fouad; Tastan Bishop, Özlem; Tiffin, Nicki; Ulenga, Nzovu

    2016-01-01

    The application of genomics technologies to medicine and biomedical research is increasing in popularity, made possible by new high-throughput genotyping and sequencing technologies and improved data analysis capabilities. Some of the greatest genetic diversity among humans, animals, plants, and microbiota occurs in Africa, yet genomic research outputs from the continent are limited. The Human Heredity and Health in Africa (H3Africa) initiative was established to drive the development of genomic research for human health in Africa, and through recognition of the critical role of bioinformatics in this process, spurred the establishment of H3ABioNet, a pan-African bioinformatics network for H3Africa. The limitations in bioinformatics capacity on the continent have been a major contributory factor to the lack of notable outputs in high-throughput biology research. Although pockets of high-quality bioinformatics teams have existed previously, the majority of research institutions lack experienced faculty who can train and supervise bioinformatics students. H3ABioNet aims to address this dire need, specifically in the area of human genetics and genomics, but knock-on effects are ensuring this extends to other areas of bioinformatics. Here, we describe the emergence of genomics research and the development of bioinformatics in Africa through H3ABioNet. PMID:26627985

  12. Citizen Management of Technology: A Science and Technology Studies approach to wireless networks and urban governance trough guifi.net

    Directory of Open Access Journals (Sweden)

    Yann Bona Beauvois

    2011-03-01

    Full Text Available Thesis presented at the Departament de Psicologia Social de la UAB by Yann Bona on December, 2010. Directed by Dr. Joan Pujol Tarrés.This dissertation explores the many ways in which citizens aiming to manage technologies in urban scape relate to public administrations. To accomplish it's task, it brings forward certain STS notions such as cosmopolitics, hybrid composition or technical democracy. On a general level, this thesis seeks an answer to Bruno Latour concern with what does it mean to conceive the technical as political?. We offer a set of conclusions based on what we choose to name a Sociotechnique of Public Policy .Our work relies on a case study focused on a free and open wireless network (located in Catalunya for the most part and called guifi.net that emerged from the desire and will of Civil Society wich, up to date, turns out to be the world's biggest free wireless network.

  13. Subsidizing Creativity through Network Design: Zero-Pricing and Net Neutrality

    OpenAIRE

    Robin S. Lee; Tim Wu

    2009-01-01

    This paper focuses on the pricing aspect of the "net neutrality" debate -- in particular, the de facto ban on fees levied by Internet service providers on content providers to reach users. This "zero-price" rule may prove desirable for several reasons. Using a two-sided market analysis, we suggest that it subsidizes creativity and innovation in new content creation -- goals shared by copyright and patent laws. The rule also helps to solve a coordination problem: since Internet service provide...

  14. Implementing Network Common Data Form (netCDF) for the 3DWF Model

    Science.gov (United States)

    2016-02-01

    executable code file in MATLAB is listed in Appendix A-2. From the menu page of the 3DWF GUI currently being redesigned, as shown in Fig. 3, the...WRF result” from the top portion of the 3DWF GUI menu page The “WRF result” option will activate and run the MATLAB executable file named...initialization will also be documented. 15. SUBJECT TERMS 3DWF, netCDF, GUI , WFR 16. SECURITY CLASSIFICATION OF: 17. LIMITATION OF

  15. Robust Detection of Impaired Resting State Functional Connectivity Networks in Alzheimer's Disease Using Elastic Net Regularized Regression

    Science.gov (United States)

    Teipel, Stefan J.; Grothe, Michel J.; Metzger, Coraline D.; Grimmer, Timo; Sorg, Christian; Ewers, Michael; Franzmeier, Nicolai; Meisenzahl, Eva; Klöppel, Stefan; Borchardt, Viola; Walter, Martin; Dyrba, Martin

    2017-01-01

    The large number of multicollinear regional features that are provided by resting state (rs) fMRI data requires robust feature selection to uncover consistent networks of functional disconnection in Alzheimer's disease (AD). Here, we compared elastic net regularized and classical stepwise logistic regression in respect to consistency of feature selection and diagnostic accuracy using rs-fMRI data from four centers of the “German resting-state initiative for diagnostic biomarkers” (psymri.org), comprising 53 AD patients and 118 age and sex matched healthy controls. Using all possible pairs of correlations between the time series of rs-fMRI signal from 84 functionally defined brain regions as the initial set of predictor variables, we calculated accuracy of group discrimination and consistency of feature selection with bootstrap cross-validation. Mean areas under the receiver operating characteristic curves as measure of diagnostic accuracy were 0.70 in unregularized and 0.80 in regularized regression. Elastic net regression was insensitive to scanner effects and recovered a consistent network of functional connectivity decline in AD that encompassed parts of the dorsal default mode as well as brain regions involved in attention, executive control, and language processing. Stepwise logistic regression found no consistent network of AD related functional connectivity decline. Regularized regression has high potential to increase diagnostic accuracy and consistency of feature selection from multicollinear functional neuroimaging data in AD. Our findings suggest an extended network of functional alterations in AD, but the diagnostic accuracy of rs-fMRI in this multicenter setting did not reach the benchmark defined for a useful biomarker of AD. PMID:28101051

  16. Caught in the Net: The Network-Entrepreneurship Connection in Public Schools

    Science.gov (United States)

    Eyal, Ori

    2008-01-01

    Purpose: The purpose of this paper is to explore the association between public schools' networks and strategies of entrepreneurship. Design/methodology/approach: The Public School Entrepreneurship Inventory (PSEI) and a questionnaire on schools' networks were administered to a stratified, random sample of teachers and principals from 140 Israeli…

  17. Regional Characterization of Tokyo Metropolitan area using a highly-dense seismic network (MeSO-net)

    Science.gov (United States)

    Hirata, Naoshi; Nakagawa, Shigeki; Sakai, Shin'ichi; Panayotopoulos, Yannis; Ishikawa, Masahiro; Ishibe, Takeo; Kimura, Hisanori; Honda, Ryou

    2015-04-01

    We have developed a dense seismic network, MeSO-net (Metropolitan Seismic Observation network), which consists of about 300 seismic stations, since 2007 in the greater Tokyo urban region(Hirata et al., 2009). Using MeSO-net data, we obtain P- and S- wave velocity tomograms (Nakagawa et al., 2010) and Qp, Qs tomograms (Panayotopoulos et al., 2014) which show a clear image of Philippine Sea Plate (PSP) and PAcific Plate (PAP). A depth to the top of PSP, 20 to 30 km beneath northern part of Tokyo bay, is about 10 km shallower than previous estimates based on the hypocenter distribution (Ishida, 1992). Based on elastic wave velocities of rocks and minerals, we constructed a petrologic model. The Vp steps in subducting Izu forearc crust occurs at a depth of 30km (blueschist or greenschist to garnet amphibolite transformation) and a depth of 50km (garnet amphibolite to eclogite transformation). Both temperatures are estimated to be 500 and 600 degree C, respectively. The high Vp/Vs anomaly (>1.9) implies large amounts of fluid H2O released by garnet amphibolite to eclogite dehydration reactions. This study is supported by MEXT Japan under the Special Project for Reducing Vulnerability for Urban Mega Earthquake Disasters.

  18. Present and Future of Metropolitan Seismic Observation network (MeSO-net) in Japan

    Science.gov (United States)

    Hirata, N.; Nakagawa, S.; Sakai, S.; Honda, R.; Kimura, H.; Panayotopoulos, Y.; Kano, M.

    2015-12-01

    Tokyo and its vicinity are most seismically risky areas in the world. To prepare for the seismic disaster we have started a series of integrated Tokyo Metropolitan projects for disaster mitigation since 2002.The current Tokyo Metropolitan Project (Phase III) has started in 2012 with a new project name as "Special Project for Reducing Vulnerability for Urban Mega-earthquake Disasters" to use MeSO-net data for constructing 3-D velocity and Q structure beneath the greater Tokyo. We aim to collect data for regional characterization to access seismic hazard produced by subduction of Philippine Sea and Pacific plates. The data from MeSO-net are continuously collected at the data management center in the Earthquake Research Institute (ERI), the University of Tokyo, with a sampling rate of 200 Hz. The data are 3-componnent accelerogram with a full scale of +/- 1,500 gal for horizontal and +/-500 gal for vertical component and the effective dynamic range is 135dB at 40Hz. Available frequency range is from 0.05 to 85 Hz, which is good for travel time analysis of body waves to ambient noise analysis for surface waves. We have successfully operated MeSO-net for about 7 years without serious malfunction. We collect more than 150 TB continuous ground motion data with more than 100K earthquakes including the 2011 Tohoku-oki earthquake and all its aftershocks. The data are used many studies (e.g., Nakagawa et al., 2010,2015; Ishibe et al., 2015; Denolle et al., 2014) and currently prepared for disclosing both in continues and event-by-event format. We are developing a fully automatic earthquake detection/location system for local earthquakes beneath MeSO-net. A numerical system to estimate ground motions at an arbitrary location without MeSO-net station is under developing (Kano et al., 2015).We also install a sensor system in a building for monitoring motion and damages by a large earthquake (Nakashima et al., 2015). Those studies are eventually integrated to develop an advanced

  19. The PluriNetWork: an electronic representation of the network underlying pluripotency in mouse, and its applications.

    Directory of Open Access Journals (Sweden)

    Anup Som

    Full Text Available BACKGROUND: Analysis of the mechanisms underlying pluripotency and reprogramming would benefit substantially from easy access to an electronic network of genes, proteins and mechanisms. Moreover, interpreting gene expression data needs to move beyond just the identification of the up-/downregulation of key genes and of overrepresented processes and pathways, towards clarifying the essential effects of the experiment in molecular terms. METHODOLOGY/PRINCIPAL FINDINGS: We have assembled a network of 574 molecular interactions, stimulations and inhibitions, based on a collection of research data from 177 publications until June 2010, involving 274 mouse genes/proteins, all in a standard electronic format, enabling analyses by readily available software such as Cytoscape and its plugins. The network includes the core circuit of Oct4 (Pou5f1, Sox2 and Nanog, its periphery (such as Stat3, Klf4, Esrrb, and c-Myc, connections to upstream signaling pathways (such as Activin, WNT, FGF, BMP, Insulin, Notch and LIF, and epigenetic regulators as well as some other relevant genes/proteins, such as proteins involved in nuclear import/export. We describe the general properties of the network, as well as a Gene Ontology analysis of the genes included. We use several expression data sets to condense the network to a set of network links that are affected in the course of an experiment, yielding hypotheses about the underlying mechanisms. CONCLUSIONS/SIGNIFICANCE: We have initiated an electronic data repository that will be useful to understand pluripotency and to facilitate the interpretation of high-throughput data. To keep up with the growth of knowledge on the fundamental processes of pluripotency and reprogramming, we suggest to combine Wiki and social networking software towards a community curation system that is easy to use and flexible, and tailored to provide a benefit for the scientist, and to improve communication and exchange of research results. A

  20. NetDiff - Bayesian model selection for differential gene regulatory network inference.

    Science.gov (United States)

    Thorne, Thomas

    2016-12-16

    Differential networks allow us to better understand the changes in cellular processes that are exhibited in conditions of interest, identifying variations in gene regulation or protein interaction between, for example, cases and controls, or in response to external stimuli. Here we present a novel methodology for the inference of differential gene regulatory networks from gene expression microarray data. Specifically we apply a Bayesian model selection approach to compare models of conserved and varying network structure, and use Gaussian graphical models to represent the network structures. We apply a variational inference approach to the learning of Gaussian graphical models of gene regulatory networks, that enables us to perform Bayesian model selection that is significantly more computationally efficient than Markov Chain Monte Carlo approaches. Our method is demonstrated to be more robust than independent analysis of data from multiple conditions when applied to synthetic network data, generating fewer false positive predictions of differential edges. We demonstrate the utility of our approach on real world gene expression microarray data by applying it to existing data from amyotrophic lateral sclerosis cases with and without mutations in C9orf72, and controls, where we are able to identify differential network interactions for further investigation.

  1. NetMets: software for quantifying and visualizing errors in biological network segmentation.

    Science.gov (United States)

    Mayerich, David; Bjornsson, Chris; Taylor, Jonathan; Roysam, Badrinath

    2012-01-01

    One of the major goals in biomedical image processing is accurate segmentation of networks embedded in volumetric data sets. Biological networks are composed of a meshwork of thin filaments that span large volumes of tissue. Examples of these structures include neurons and microvasculature, which can take the form of both hierarchical trees and fully connected networks, depending on the imaging modality and resolution. Network function depends on both the geometric structure and connectivity. Therefore, there is considerable demand for algorithms that segment biological networks embedded in three-dimensional data. While a large number of tracking and segmentation algorithms have been published, most of these do not generalize well across data sets. One of the major reasons for the lack of general-purpose algorithms is the limited availability of metrics that can be used to quantitatively compare their effectiveness against a pre-constructed ground-truth. In this paper, we propose a robust metric for measuring and visualizing the differences between network models. Our algorithm takes into account both geometry and connectivity to measure network similarity. These metrics are then mapped back onto an explicit model for visualization.

  2. A Microsoft-Excel-based tool for running and critically appraising network meta-analyses--an overview and application of NetMetaXL.

    Science.gov (United States)

    Brown, Stephen; Hutton, Brian; Clifford, Tammy; Coyle, Doug; Grima, Daniel; Wells, George; Cameron, Chris

    2014-09-29

    The use of network meta-analysis has increased dramatically in recent years. WinBUGS, a freely available Bayesian software package, has been the most widely used software package to conduct network meta-analyses. However, the learning curve for WinBUGS can be daunting, especially for new users. Furthermore, critical appraisal of network meta-analyses conducted in WinBUGS can be challenging given its limited data manipulation capabilities and the fact that generation of graphical output from network meta-analyses often relies on different software packages than the analyses themselves. We developed a freely available Microsoft-Excel-based tool called NetMetaXL, programmed in Visual Basic for Applications, which provides an interface for conducting a Bayesian network meta-analysis using WinBUGS from within Microsoft Excel. . This tool allows the user to easily prepare and enter data, set model assumptions, and run the network meta-analysis, with results being automatically displayed in an Excel spreadsheet. It also contains macros that use NetMetaXL's interface to generate evidence network diagrams, forest plots, league tables of pairwise comparisons, probability plots (rankograms), and inconsistency plots within Microsoft Excel. All figures generated are publication quality, thereby increasing the efficiency of knowledge transfer and manuscript preparation. We demonstrate the application of NetMetaXL using data from a network meta-analysis published previously which compares combined resynchronization and implantable defibrillator therapy in left ventricular dysfunction. We replicate results from the previous publication while demonstrating result summaries generated by the software. Use of the freely available NetMetaXL successfully demonstrated its ability to make running network meta-analyses more accessible to novice WinBUGS users by allowing analyses to be conducted entirely within Microsoft Excel. NetMetaXL also allows for more efficient and transparent

  3. DexterNet: An Open Platform for Heterogeneous Body Sensor Networks and Its Applications

    Science.gov (United States)

    2008-12-19

    body motions and the other measuring the ECG and respiratory patterns. At the second layer, called the personal network layer ( PNL ), the wireless body...sensors on a single subject communicate with a mobile base station, which supports Linux OS and the IEEE 802.15.4 protocol. The BSL and PNL functions...scalable, and can be reconfigured on-the-fly via SPINE. At the third layer, called the global network layer (GNL), multiple PNLs communicate with a remote

  4. JiffyNet: a web-based instant protein network modeler for newly sequenced species

    OpenAIRE

    Kim, Eiru; Kim, Hanhae; Lee, Insuk

    2013-01-01

    Revolutionary DNA sequencing technology has enabled affordable genome sequencing for numerous species. Thousands of species already have completely decoded genomes, and tens of thousands more are in progress. Naturally, parallel expansion of the functional parts list library is anticipated, yet genome-level understanding of function also requires maps of functional relationships, such as functional protein networks. Such networks have been constructed for many sequenced species including comm...

  5. Foodborne disease in Australia: incidence, notifications and outbreaks. Annual report of the OzFoodNet network, 2002.

    Science.gov (United States)

    2003-01-01

    In 2002, OzFoodNet continued to enhance surveillance of foodborne diseases across Australia. The OzFoodNet network expanded to cover all Australian states and territories in 2002. The National Centre for Epidemiology and Population Health together with OzFoodNet concluded a national survey of gastroenteritis, which found that there were 17.2 (95% C.I. 14.5-19.9) million cases of gastroenteritis each year in Australia. The credible range of gastroenteritis that may be due to food each year is between 4.0-6.9 million cases with a mid-point of 5.4 million. During 2002, there were 23,434 notifications of eight bacterial diseases that may have been foodborne, which was a 7.7 per cent increase over the mean of the previous four years. There were 14,716 cases of campylobacteriosis, 7,917 cases of salmonellosis, 505 cases of shigellosis, 99 cases of yersiniosis, 64 cases of typhoid, 62 cases of listeriosis, 58 cases of shiga toxin producing E. coli and 13 cases of haemolytic uraemic syndrome. OzFoodNet sites reported 92 foodborne disease outbreaks affecting 1,819 persons, of whom 5.6 per cent (103/1,819) were hospitalised and two people died. There was a wide range of foods implicated in these outbreaks and the most common agent was Salmonella Typhimurium. Sites reported two outbreaks with potential for international spread involving contaminated tahini from Egypt resulting in an outbreak of Salmonella Montevideo infection and an outbreak of suspected norovirus infection associated with imported Japanese oysters. In addition, there were three outbreaks associated with animal petting zoos or poultry hatching programs and 318 outbreaks of suspected person-to-person transmission. Sites conducted 100 investigations into clusters of gastrointestinal illness where a source could not be identified, including three multi-state outbreaks of salmonellosis. OzFoodNet identified important risk factors for foodborne disease infection, including: Salmonella infections due to chicken and

  6. SolNet

    DEFF Research Database (Denmark)

    Jordan, Ulrike; Vajen, Klaus; Bales, Chris

    2014-01-01

    SolNet, founded in 2006, is the first coordinated International PhD education program on Solar Thermal Engineering. The SolNet network is coordinated by the Institute of Thermal Engineering at Kassel University, Germany. The network offers PhD courses on solar heating and cooling, conference...

  7. High-throughput and low-latency network communication with NetIO

    CERN Document Server

    AUTHOR|(CDS)2088631; The ATLAS collaboration

    2017-01-01

    HPC network technologies like Infiniband, TrueScale or OmniPath provide low-latency and high-throughput communication between hosts, which makes them attractive options for data-acquisition systems in large-scale high-energy physics experiments. Like HPC networks, DAQ networks are local and include a well specified number of systems. Unfortunately traditional network communication APIs for HPC clusters like MPI or PGAS target exclusively the HPC community and are not suited well for DAQ applications. It is possible to build distributed DAQ applications using low-level system APIs like Infiniband Verbs, but it requires a non-negligible effort and expert knowledge. At the same time, message services like ZeroMQ have gained popularity in the HEP community. They allow building distributed applications with a high-level approach and provide good performance. Unfortunately their usage usually limits developers to TCP/IP-based networks. While it is possible to operate a TCP/IP stack on top of Infiniband and OmniPath...

  8. iRegNet3D: three-dimensional integrated regulatory network for the genomic analysis of coding and non-coding disease mutations.

    Science.gov (United States)

    Liang, Siqi; Tippens, Nathaniel D; Zhou, Yaoda; Mort, Matthew; Stenson, Peter D; Cooper, David N; Yu, Haiyuan

    2017-01-18

    The mechanistic details of most disease-causing mutations remain poorly explored within the context of regulatory networks. We present a high-resolution three-dimensional integrated regulatory network (iRegNet3D) in the form of a web tool, where we resolve the interfaces of all known transcription factor (TF)-TF, TF-DNA and chromatin-chromatin interactions for the analysis of both coding and non-coding disease-associated mutations to obtain mechanistic insights into their functional impact. Using iRegNet3D, we find that disease-associated mutations may perturb the regulatory network through diverse mechanisms including chromatin looping. iRegNet3D promises to be an indispensable tool in large-scale sequencing and disease association studies.

  9. An international network (PlaNet) to evaluate a human placental testing platform for chemicals safety testing in pregnancy.

    Science.gov (United States)

    Brownbill, Paul; Chernyavsky, Igor; Bottalico, Barbara; Desoye, Gernot; Hansson, Stefan; Kenna, Gerry; Knudsen, Lisbeth E; Markert, Udo R; Powles-Glover, Nicola; Schneider, Henning; Leach, Lopa

    2016-09-01

    The human placenta is a critical life-support system that nourishes and protects a rapidly growing fetus; a unique organ, species specific in structure and function. We consider the pressing challenge of providing additional advice on the safety of prescription medicines and environmental exposures in pregnancy and how ex vivo and in vitro human placental models might be advanced to reproducible human placental test systems (HPTSs), refining a weight of evidence to the guidance given around compound risk assessment during pregnancy. The placental pharmacokinetics of xenobiotic transfer, dysregulated placental function in pregnancy-related pathologies and influx/efflux transporter polymorphisms are a few caveats that could be addressed by HPTSs, not the specific focus of current mammalian reproductive toxicology systems. An international consortium, "PlaNet", will bridge academia, industry and regulators to consider screen ability and standardisation issues surrounding these models, with proven reproducibility for introduction into industrial and clinical practice. Copyright © 2016 Elsevier Inc. All rights reserved.

  10. Enviro-Net: From Networks of Ground-Based Sensor Systems to a Web Platform for Sensor Data Management

    Directory of Open Access Journals (Sweden)

    Mario A. Nascimento

    2011-06-01

    Full Text Available Ecosystems monitoring is essential to properly understand their development and the effects of events, both climatological and anthropological in nature. The amount of data used in these assessments is increasing at very high rates. This is due to increasing availability of sensing systems and the development of new techniques to analyze sensor data. The Enviro-Net Project encompasses several of such sensor system deployments across five countries in the Americas. These deployments use a few different ground-based sensor systems, installed at different heights monitoring the conditions in tropical dry forests over long periods of time. This paper presents our experience in deploying and maintaining these systems, retrieving and pre-processing the data, and describes the Web portal developed to help with data management, visualization and analysis.

  11. TownshipNet: A localized hybrid TVWS-WiFi and cloud services network

    CSIR Research Space (South Africa)

    Hadzic, S

    2016-10-01

    Full Text Available This paper describes a network architecture to provide low cost last mile access and cloud services for local content sharing in a poorly resourced township environment. We describe how ICT solutions are developed in close partnership with the local...

  12. European EADV network on assessment of severity and burden of Pruritus (PruNet): first meeting on outcome tools.

    Science.gov (United States)

    Ständer, S; Zeidler, C; Riepe, C; Steinke, S; Fritz, F; Bruland, P; Soto-Rey, I; Storck, M; Agner, T; Augustin, M; Blome, C; Dalgard, F; Evers, A W M; Garcovich, S; Gonçalo, M; Lambert, J; Legat, F J; Leslie, T; Misery, L; Raap, U; Reich, A; Şavk, E; Streit, M; Serra-Baldrich, E; Szepietowski, J; Wallengren, J; Weisshaar, E; Dugas, M

    2016-07-01

    Chronic pruritus is a frequently occurring symptom of various dermatoses that causes a high burden and impaired quality of life. An effective anti pruritic therapy is important for the patient, but its effectiveness is difficult to evaluate. Diverse methods and interpretations of pruritic metrics are utilized in clinical trials and the daily clinical practice in different countries, resulting in difficulties comparing collected data. We founded a European Network on Assessment of Severity and Burden of Pruritus (PruNet) that is supported by the EADV. PruNet consists of 28 experts from 15 EU countries (21 dermatologists, 5 medical informaticists, 2 psychologists) and aims to unify the assessment of itch in routine dermatological care. Following a preliminary survey, a consensus conference was held in order to agree upon the prioritization of patient-reported outcome tools. Through utilizing the Delphi method, it was agreed that tools for measuring itch intensity (ex. the visual analogue scale) and quality of life (ex. ItchyQoL) are of primary importance and should urgently be foremost validated. The validation and harmonization of standards are needed for the improvement of quality care for patients suffering from pruritic dermatoses. This summer, the first validation studies in several EADV member countries already began. © 2015 European Academy of Dermatology and Venereology.

  13. Foodborne disease investigation across Australia: annual report of the OzFoodNet network, 2003.

    Science.gov (United States)

    2004-01-01

    In 2003, OzFoodNet conducted enhanced surveillance of foodborne diseases across Australia, which covered all states and territories. During 2003, there were 23,250 notifications of eight potentially foodborne diseases, of which 67 per cent and 30 per cent were due to Campylobacter and Salmonella infections respectively. The most common Salmonella serotype was Typhimurium, as in previous years. Most S. Enteritidis were acquired overseas, except for Queensland where 52 per cent of infections were acquired locally. Locally acquired S. Enteritidis infections in Australia were predominantly due to phage type 26. The most common serotype of Shiga toxin producing E. coli was O157, although for 49 per cent of notified infections serotype was unknown due to the use of polymerase chain reaction based screening tests. There were 12 materno-foetal listeriosis infections in 2003, which was an increase compared to recent years. During 2003, there were 444 outbreaks of gastroenteritis and foodborne disease recorded. Ninety-nine of these were of foodborne origin affecting 1,686 persons, hospitalising 105 and causing six deaths. A wide range of agents and foods caused these outbreaks, with Salmonella Typhimurium being the most common pathogen. Outbreaks associated with fish and seafood dishes, poultry meat, and Asian style and imported foods were common. Four outbreaks with international implications were reported: an outbreak of Salmonella in Montevideo involving contaminated tahini from the Middle East and three outbreaks of norovirus infection associated with imported Japanese oysters. Outbreak data indicated a need to monitor food safety in aged care settings, restaurants and catering. Eighty-nine investigations into clusters of gastrointestinal illness where a source could not be identified were conducted, including multi-state outbreaks of salmonellosis. One multistate investigation of antibiotic resistant Salmonella Paratyphi b Java identified 18 cases who had recent

  14. International network for comparison of HIV neutralization assays: the NeutNet report.

    Directory of Open Access Journals (Sweden)

    Eva Maria Fenyö

    Full Text Available BACKGROUND: Neutralizing antibody assessments play a central role in human immunodeficiency virus type-1 (HIV-1 vaccine development but it is unclear which assay, or combination of assays, will provide reliable measures of correlates of protection. To address this, an international collaboration (NeutNet involving 18 independent participants was organized to compare different assays. METHODS: Each laboratory evaluated four neutralizing reagents (TriMab, 447-52D, 4E10, sCD4 at a given range of concentrations against a panel of 11 viruses representing a wide range of genetic subtypes and phenotypes. A total of 16 different assays were compared. The assays utilized either uncloned virus produced in peripheral blood mononuclear cells (PBMCs (virus infectivity assays, VI assays, or their Env-pseudotyped (gp160 derivatives produced in 293T cells (PSV assays from molecular clones or uncloned virus. Target cells included PBMC and genetically-engineered cell lines in either a single- or multiple-cycle infection format. Infection was quantified by using a range of assay read-outs that included extracellular or intracellular p24 antigen detection, RNA quantification and luciferase and beta-galactosidase reporter gene expression. FINDINGS: PSV assays were generally more sensitive than VI assays, but there were important differences according to the virus and inhibitor used. For example, for TriMab, the mean IC50 was always lower in PSV than in VI assays. However, with 4E10 or sCD4 some viruses were neutralized with a lower IC50 in VI assays than in the PSV assays. Inter-laboratory concordance was slightly better for PSV than for VI assays with some viruses, but for other viruses agreement between laboratories was limited and depended on both the virus and the neutralizing reagent. CONCLUSIONS: The NeutNet project demonstrated clear differences in assay sensitivity that were dependent on both the neutralizing reagent and the virus. No single assay was

  15. NetWorking News - A Method for Engaging Children Actively In Design

    DEFF Research Database (Denmark)

    Nørregaard, Peter; Dindler, Christian; Fritsch, Jonas

    2003-01-01

    For many years cooperative design was primarily concerned with the development of IT supported systems for professional users. However, the cooperative design approach can embrace other social practices such as children’s everyday life. At a methodological level there is no difference in designin...... the Networking News workshop, offers an opportunity to make first hand studies of children’s IT supported social activities in an informal classroom setting....

  16. Energy Consumption Evaluation for Wireless Sensor Network Nodes Based on Queuing Petri Net

    OpenAIRE

    Li, J.; Zhou, H. Y.; D. C. Zuo; Hou, K. M.; Xie, H. P.; Zhou, P.

    2014-01-01

    Due to the large scale of wireless sensor networks (WSN) and the huge density of WSN nodes, classical performance evaluation techniques face new challenges in view of the complexity and diversity in WSN applications. This paper presents a “state-event-transition” formal description for WSN nodes and proposes an event-driven QPN-based modeling technique to simulate the energy behaviors of nodes. Besides, the framework architecture of a dedicated energy evaluation platform has been introduced, ...

  17. Outcomes of polio eradication activities in Uttar Pradesh, India: the Social Mobilization Network (SM Net and Core Group Polio Project (CGPP

    Directory of Open Access Journals (Sweden)

    Singh Vibha

    2011-05-01

    Full Text Available Abstract Background The primary strategy to interrupt transmission of wild poliovirus in India is to improve supplemental immunization activities and routine immunization coverage in priority districts with a focus on 107 high-risk blocks of western Uttar Pradesh and central Bihar. Villages or urban areas with a history of wild poliovirus transmission, or hard-to-reach or resistant populations are categorized as high-risk areas within blocks. The Social Mobilization Network (SM Net was formed in Uttar Pradesh in 2003 to support polio eradication efforts through improved planning, implementation and monitoring of social mobilization activities in those high-risk areas. In this paper, we examine the vaccination outcomes in districts of SM Net where the CORE Group works. Methods We carried out a secondary data analysis of routine monitoring information collected by the SM Net and the Government of India. These data include information about vaccination outcomes in SM Net areas and non-SM Net areas within the districts where the CORE Group operates. Statistical analysis was used to compare, between SM Net and non-SM Net areas, vaccination outcomes considered sensitive to social mobilization efforts of the SM Net. We employed Generalized Estimating Equations (GEE statistical method to account for Intra-cluster Correlation (ICC, and used 'Quasi-likelihood under the independence model criterion (QIC' as the model selection method. Results Vaccination outcomes in SM Net areas were as high as or higher than in non-SM Net areas. There was considerable variation in vaccination outcomes between districts. Conclusions While not conclusive, the results suggest that the social mobilization efforts of the SM Net and the CORE Group are helping to increase vaccination levels in high-risk areas of Uttar Pradesh. Vaccination outcomes in CORE Group areas were equal or higher than in non-CORE, non-SM Net areas. This occurred even though SM Net areas are those with

  18. Temporal Dynamics of Sensorimotor Networks in Effort-Based Cost-Benefit Valuation: Early Emergence and Late Net Value Integration.

    Science.gov (United States)

    Harris, Alison; Lim, Seung-Lark

    2016-07-06

    Although physical effort can impose significant costs on decision-making, when and how effort cost information is incorporated into choice remains contested, reflecting a larger debate over the role of sensorimotor networks in specifying behavior. Serial information processing models, in which motor circuits simply implement the output of cognitive systems, hypothesize that effort cost factors into decisions relatively late, via integration with stimulus values into net (combined) value signals in dorsomedial frontal cortex (dmFC). In contrast, ethology-inspired approaches suggest a more active role for the dorsal sensorimotor stream, with effort cost signals emerging rapidly after stimulus onset. Here we investigated the time course of effort cost integration using event-related potentials in hungry human subjects while they made decisions about expending physical effort for appetitive foods. Consistent with the ethological perspective, we found that effort cost was represented from as early as 100-250 ms after stimulus onset, localized to dorsal sensorimotor regions including middle cingulate, somatosensory, and motor/premotor cortices. However, examining the same data time-locked to motor output revealed net value signals combining stimulus value and effort cost approximately -400 ms before response, originating from sensorimotor areas including dmFC, precuneus, and posterior parietal cortex. Granger causal connectivity analysis of the motor effector signal in the time leading to response showed interactions between these sensorimotor regions and ventrolateral prefrontal cortex, a structure associated with adjusting behavior-response mappings. These results suggest that rapid activation of sensorimotor regions interacts with cognitive valuation systems, producing a net value signal reflecting both physical effort and reward contingencies. Although physical effort imposes a cost on choice, when and how effort cost influences neural correlates of decision

  19. Evaluation of Internet Social Networks using Net scoring Tool: A Case Study in Adverse Drug Reaction Mining.

    Science.gov (United States)

    Katsahian, Sandrine; Simond Moreau, Erica; Leprovost, Damien; Lardon, Jeremy; Bousquet, Cedric; Kerdelhué, Gaétan; Abdellaoui, Redhouane; Texier, Nathalie; Burgun, Anita; Boussadi, Abdelali; Faviez, Carole

    2015-01-01

    Suspected adverse drug reactions (ADR) reported by patients through social media can be a complementary tool to already existing ADRs signal detection processes. However, several studies have shown that the quality of medical information published online varies drastically whatever the health topic addressed. The aim of this study is to use an existing rating tool on a set of social network web sites in order to assess the capabilities of these tools to guide experts for selecting the most adapted social network web site to mine ADRs. First, we reviewed and rated 132 Internet forums and social networks according to three major criteria: the number of visits, the notoriety of the forum and the number of messages posted in relation with health and drug therapy. Second, the pharmacist reviewed the topic-oriented message boards with a small number of drug names to ensure that they were not off topic. Six experts have been chosen to assess the selected internet forums using a French scoring tool: Net scoring. Three different scores and the agreement between experts according to each set of scores using weighted kappa pooled using mean have been computed. Three internet forums were chosen at the end of the selection step. Some criteria get high score (scores 3-4) no matter the website evaluated like accessibility (45-46) or design (34-36), at the opposite some criteria always have bad scores like quantitative (40-42) and ethical aspect (43-44), hyperlinks actualization (30-33). Kappa were positives but very small which corresponds to a weak agreement between experts. The personal opinion of the expert seems to have a major impact, undermining the relevance of the criterion. Our future work is to collect results given by this evaluation grid and proposes a new scoring tool for Internet social networks assessment.

  20. Preliminary findings on the use of osteopathic manipulative treatment: outcomes during the formation of the practice-based research network, DO-Touch.NET.

    Science.gov (United States)

    Degenhardt, Brian F; Johnson, Jane C; Gross, Shanin R; Hagan, Celia; Lund, Gregg; Curry, William J

    2014-03-01

    Few studies have assessed the use of osteopathic manipulative treatment (OMT) and subsequent patient-reported outcomes. To assess the current use of OMT and associated patient-reported outcomes. A retrospective medical record review and a prospective observational study. Two university-based sites and their clinics associated with the practice-based research network DO-Touch.NET. Patients aged 18 years or older who received OMT. Medical records from 2007 were retrospectively reviewed to identify conditions being managed with OMT. From 2008 to 2010, patients were recruited before seeing their physicians. Questionnaires were distributed to patients and physicians, and information including demographics, chief complaints, symptom severity, current and past treatments, interference of symptoms with quality of life, physical examination findings, diagnoses, OMT performed, and immediate patient response to OMT was collected. A subset of patients provided data on symptom severity and frequency and other treatments daily for the 7 days after OMT. On day 7, symptom interference with quality of life was reassessed. Retrospective data were collected from 2569 office visits, and prospective data were collected from 299 office visits (patient age range, 18-93 years). In the medical record review, 17 of the top 25 diagnoses (68%) were related to musculoskeletal conditions. In the prospective study, 18 of the top 24 medical diagnoses (75%) were related to musculoskeletal conditions. Immediately after OMT, patients at 271 of 296 office visits (92%) felt better or much better; those at 5 (osteopathic research and define evidence-based standards for OMT practice and training.

  1. Growing a professional network to over 3000 members in less than 4 years: evaluation of InspireNet, British Columbia's virtual nursing health services research network.

    Science.gov (United States)

    Frisch, Noreen; Atherton, Pat; Borycki, Elizabeth; Mickelson, Grace; Cordeiro, Jennifer; Novak Lauscher, Helen; Black, Agnes

    2014-02-21

    Use of Web 2.0 and social media technologies has become a new area of research among health professionals. Much of this work has focused on the use of technologies for health self-management and the ways technologies support communication between care providers and consumers. This paper addresses a new use of technology in providing a platform for health professionals to support professional development, increase knowledge utilization, and promote formal/informal professional communication. Specifically, we report on factors necessary to attract and sustain health professionals' use of a network designed to increase nurses' interest in and use of health services research and to support knowledge utilization activities in British Columbia, Canada. "InspireNet", a virtual professional network for health professionals, is a living laboratory permitting documentation of when and how professionals take up Web 2.0 and social media. Ongoing evaluation documents our experiences in establishing, operating, and evaluating this network. Overall evaluation methods included (1) tracking website use, (2) conducting two member surveys, and (3) soliciting member feedback through focus groups and interviews with those who participated in electronic communities of practice (eCoPs) and other stakeholders. These data have been used to learn about the types of support that seem relevant to network growth. Network growth exceeded all expectations. Members engaged with varying aspects of the network's virtual technologies, such as teams of professionals sharing a common interest, research teams conducting their work, and instructional webinars open to network members. Members used wikis, blogs, and discussion groups to support professional work, as well as a members' database with contact information and areas of interest. The database is accessed approximately 10 times per day. InspireNet public blog posts are accessed roughly 500 times each. At the time of writing, 21 research teams

  2. International network for comparison of HIV neutralization assays: the NeutNet report II.

    Directory of Open Access Journals (Sweden)

    Leo Heyndrickx

    Full Text Available BACKGROUND: Neutralizing antibodies provide markers for vaccine-induced protective immunity in many viral infections. By analogy, HIV-1 neutralizing antibodies induced by immunization may well predict vaccine effectiveness. Assessment of neutralizing antibodies is therefore of primary importance, but is hampered by the fact that we do not know which assay(s can provide measures of protective immunity. An international collaboration (NeutNet involving 18 different laboratories previously compared different assays using monoclonal antibodies (mAbs and soluble CD4 (Phase I study. METHODS: In the present study (Phase II, polyclonal reagents were evaluated by 13 laboratories. Each laboratory evaluated nine plasmas against an 8 virus panel representing different genetic subtypes and phenotypes. TriMab, a mixture of three mAbs, was used as a positive control allowing comparison of the results with Phase I in a total of nine different assays. The assays used either uncloned virus produced in peripheral blood mononuclear cells (PBMCs (Virus Infectivity Assays, VIA, or Env (gp160-pseudotyped viruses (pseudoviruses, PSV produced in HEK293T cells from molecular clones or from uncloned virus. Target cells included PBMC and genetically engineered cell lines in either single- or multiple-cycle infection format. Infection was quantified by using a range of assay read-outs including extra- or intra-cellular p24 antigen detection, luciferase, beta-galactosidase or green fluorescent protein (GFP reporter gene expression. FINDINGS: Using TriMab, results of Phase I and Phase II were generally in agreement for six of the eight viruses tested and confirmed that the PSV assay is more sensitive than PBMC (p = 0.014. Comparisons with the polyclonal reagents showed that sensitivities were dependent on both virus and plasma. CONCLUSIONS: Here we further demonstrate clear differences in assay sensitivities that were dependent on both the neutralizing reagent and the virus

  3. URBAN-NET: A Network-based Infrastructure Monitoring and Analysis System for Emergency Management and Public Safety

    Energy Technology Data Exchange (ETDEWEB)

    Lee, Sangkeun (Matt) [ORNL; Chen, Liangzhe [ORNL; Duan, Sisi [ORNL; Chinthavali, Supriya [ORNL; Shankar, Mallikarjun (Arjun) [ORNL; Prakash, B. Aditya [Virginia Tech, Blacksburg, VA

    2016-01-01

    Abstract Critical Infrastructures (CIs) such as energy, water, and transportation are complex networks that are crucial for sustaining day-to-day commodity flows vital to national security, economic stability, and public safety. The nature of these CIs is such that failures caused by an extreme weather event or a man-made incident can trigger widespread cascading failures, sending ripple effects at regional or even national scales. To minimize such effects, it is critical for emergency responders to identify existing or potential vulnerabilities within CIs during such stressor events in a systematic and quantifiable manner and take appropriate mitigating actions. We present here a novel critical infrastructure monitoring and analysis system named URBAN-NET. The system includes a software stack and tools for monitoring CIs, pre-processing data, interconnecting multiple CI datasets as a heterogeneous network, identifying vulnerabilities through graph-based topological analysis, and predicting consequences based on what-if simulations along with visualization. As a proof-of-concept, we present several case studies to show the capabilities of our system. We also discuss remaining challenges and future work.

  4. Finding meaning in social media: content-based social network analysis of QuitNet to identify new opportunities for health promotion.

    Science.gov (United States)

    Myneni, Sahiti; Cobb, Nathan K; Cohen, Trevor

    2013-01-01

    Unhealthy behaviors increase individual health risks and are a socioeconomic burden. Harnessing social influence is perceived as fundamental for interventions to influence health-related behaviors. However, the mechanisms through which social influence occurs are poorly understood. Online social networks provide the opportunity to understand these mechanisms as they digitally archive communication between members. In this paper, we present a methodology for content-based social network analysis, combining qualitative coding, automated text analysis, and formal network analysis such that network structure is determined by the content of messages exchanged between members. We apply this approach to characterize the communication between members of QuitNet, an online social network for smoking cessation. Results indicate that the method identifies meaningful theme-based social sub-networks. Modeling social network data using this method can provide us with theme-specific insights such as the identities of opinion leaders and sub-community clusters. Implications for design of targeted social interventions are discussed.

  5. State of the (net)work address Developing criteria for applying social networking to the work environment.

    Science.gov (United States)

    Valdez, André Calero; Schaar, Anne Kathrin; Ziefle, Martina

    2012-01-01

    In an increasingly faster paced innovative world, maintaining the ability to innovate in spite of an aging work force will become every company's strongest leverage for success. Tapping the latent knowledge resources and creativity of overlooked employees and persisting crucial information for business conduct are promising results for social networking sites (SNS) in a working context. Usability and usefulness are exponential factors in creating a successful SNS. In order to make a SNS usable for a heterogeneous user group, analyses of user diversity in regard to social media need to be done. Furthermore differences in communication medium and frequency in regard to age, content, hierarchy position, departmental thresholds and company size need to be analyzed. For analysis purposes both qualitative and quantitative research methods were applied. Strong effects of age and communication content were found in survey with 194 participants.

  6. BrainSegNet: a convolutional neural network architecture for automated segmentation of human brain structures.

    Science.gov (United States)

    Mehta, Raghav; Majumdar, Aabhas; Sivaswamy, Jayanthi

    2017-04-01

    Automated segmentation of cortical and noncortical human brain structures has been hitherto approached using nonrigid registration followed by label fusion. We propose an alternative approach for this using a convolutional neural network (CNN) which classifies a voxel into one of many structures. Four different kinds of two-dimensional and three-dimensional intensity patches are extracted for each voxel, providing local and global (context) information to the CNN. The proposed approach is evaluated on five different publicly available datasets which differ in the number of labels per volume. The obtained mean Dice coefficient varied according to the number of labels, for example, it is [Formula: see text] and [Formula: see text] for datasets with the least (32) and the most (134) number of labels, respectively. These figures are marginally better or on par with those obtained with the current state-of-the-art methods on nearly all datasets, at a reduced computational time. The consistently good performance of the proposed method across datasets and no requirement for registration make it attractive for many applications where reduced computational time is necessary.

  7. A Microsoft-Excel-based tool for running and critically appraising network meta-analyses—an overview and application of NetMetaXL

    Science.gov (United States)

    2014-01-01

    Background The use of network meta-analysis has increased dramatically in recent years. WinBUGS, a freely available Bayesian software package, has been the most widely used software package to conduct network meta-analyses. However, the learning curve for WinBUGS can be daunting, especially for new users. Furthermore, critical appraisal of network meta-analyses conducted in WinBUGS can be challenging given its limited data manipulation capabilities and the fact that generation of graphical output from network meta-analyses often relies on different software packages than the analyses themselves. Methods We developed a freely available Microsoft-Excel-based tool called NetMetaXL, programmed in Visual Basic for Applications, which provides an interface for conducting a Bayesian network meta-analysis using WinBUGS from within Microsoft Excel. . This tool allows the user to easily prepare and enter data, set model assumptions, and run the network meta-analysis, with results being automatically displayed in an Excel spreadsheet. It also contains macros that use NetMetaXL’s interface to generate evidence network diagrams, forest plots, league tables of pairwise comparisons, probability plots (rankograms), and inconsistency plots within Microsoft Excel. All figures generated are publication quality, thereby increasing the efficiency of knowledge transfer and manuscript preparation. Results We demonstrate the application of NetMetaXL using data from a network meta-analysis published previously which compares combined resynchronization and implantable defibrillator therapy in left ventricular dysfunction. We replicate results from the previous publication while demonstrating result summaries generated by the software. Conclusions Use of the freely available NetMetaXL successfully demonstrated its ability to make running network meta-analyses more accessible to novice WinBUGS users by allowing analyses to be conducted entirely within Microsoft Excel. NetMetaXL also allows

  8. Growing a Professional Network to Over 3000 Members in Less Than 4 Years: Evaluation of InspireNet, British Columbia’s Virtual Nursing Health Services Research Network

    Science.gov (United States)

    Atherton, Pat; Borycki, Elizabeth; Mickelson, Grace; Cordeiro, Jennifer; Novak Lauscher, Helen; Black, Agnes

    2014-01-01

    Background Use of Web 2.0 and social media technologies has become a new area of research among health professionals. Much of this work has focused on the use of technologies for health self-management and the ways technologies support communication between care providers and consumers. This paper addresses a new use of technology in providing a platform for health professionals to support professional development, increase knowledge utilization, and promote formal/informal professional communication. Specifically, we report on factors necessary to attract and sustain health professionals’ use of a network designed to increase nurses’ interest in and use of health services research and to support knowledge utilization activities in British Columbia, Canada. Objective “InspireNet”, a virtual professional network for health professionals, is a living laboratory permitting documentation of when and how professionals take up Web 2.0 and social media. Ongoing evaluation documents our experiences in establishing, operating, and evaluating this network. Methods Overall evaluation methods included (1) tracking website use, (2) conducting two member surveys, and (3) soliciting member feedback through focus groups and interviews with those who participated in electronic communities of practice (eCoPs) and other stakeholders. These data have been used to learn about the types of support that seem relevant to network growth. Results Network growth exceeded all expectations. Members engaged with varying aspects of the network’s virtual technologies, such as teams of professionals sharing a common interest, research teams conducting their work, and instructional webinars open to network members. Members used wikis, blogs, and discussion groups to support professional work, as well as a members’ database with contact information and areas of interest. The database is accessed approximately 10 times per day. InspireNet public blog posts are accessed roughly 500 times

  9. CoryneRegNet 3.0--an interactive systems biology platform for the analysis of gene regulatory networks in corynebacteria and Escherichia coli.

    Science.gov (United States)

    Baumbach, Jan; Wittkop, Tobias; Rademacher, Katrin; Rahmann, Sven; Brinkrolf, Karina; Tauch, Andreas

    2007-04-30

    CoryneRegNet is an ontology-based data warehouse for the reconstruction and visualization of transcriptional regulatory interactions in prokaryotes. To extend the biological content of CoryneRegNet, we added comprehensive data on transcriptional regulations in the model organism Escherichia coli K-12, originally deposited in the international reference database RegulonDB. The enhanced web interface of CoryneRegNet offers several types of search options. The results of a search are displayed in a table-based style and include a visualization of the genetic organization of the respective gene region. Information on DNA binding sites of transcriptional regulators is depicted by sequence logos. The results can also be displayed by several layouters implemented in the graphical user interface GraphVis, allowing, for instance, the visualization of genome-wide network reconstructions and the homology-based inter-species comparison of reconstructed gene regulatory networks. In an application example, we compare the composition of the gene regulatory networks involved in the SOS response of E. coli and Corynebacterium glutamicum. CoryneRegNet is available at the following URL: http://www.cebitec.uni-bielefeld.de/groups/gi/software/coryneregnet/.

  10. Advancing medical device innovation through collaboration and coordination of structured data capture pilots: Report from the Medical Device Epidemiology Network (MDEpiNet) Specific, Measurable, Achievable, Results-Oriented, Time Bound (SMART) Think Tank.

    Science.gov (United States)

    Reed, Terrie L; Drozda, Joseph P; Baskin, Kevin M; Tcheng, James; Conway, Karen; Wilson, Natalia; Marinac-Dabic, Danica; Heise, Theodore; Krucoff, Mitchell W

    2017-12-01

    The Medical Device Epidemiology Network (MDEpiNet) is a public private partnership (PPP) that provides a platform for collaboration on medical device evaluation and depth of expertise for supporting pilots to capture, exchange and use device information for improving device safety and protecting public health. The MDEpiNet SMART Think Tank, held in February, 2013, sought to engage expert stakeholders who were committed to improving the capture of device data, including Unique Device Identification (UDI), in key electronic health information. Prior to the Think Tank there was limited collaboration among stakeholders beyond a few single health care organizations engaged in electronic capture and exchange of device data. The Think Tank resulted in what has become two sustainable multi-stakeholder device data capture initiatives, BUILD and VANGUARD. These initiatives continue to mature within the MDEpiNet PPP structure and are well aligned with the goals outlined in recent FDA-initiated National Medical Device Planning Board and Medical Device Registry Task Force white papers as well as the vision for the National Evaluation System for health Technology.%. Published by Elsevier Inc.

  11. Applying Artificial Neural Networks to Estimate Net Radiation at Surface Using the Synergy between GERB-SEVIRI and Ground Data

    Science.gov (United States)

    Geraldo Ferreira, A.; Soria, Emilio; Lopez-Baeza, Ernesto; Vila, Joan; Serrano, Antonio J.; Martinez, Marcelino; Velazquez Blazquez, Almudena; Clerbaux, Nicolas

    This paper describes the results obtained using Artificial Neural Networks (AAN) models to estimate the diurnal cycle of net radiation (Rn) at surface. The data used as input parameter in the AAN model were that measured by Geostationary Earth Radiation Budget (GERB-1) instrument, on board Meteosat 9 satellite. The data concerning Rn at the surface were collected at the Valencia Anchor Station (VAS), a ground reference meteorological station for the validation of low spatial resolution sensors situated near de city of Valencia, Spain. This data refers to the periods July 31st -August 6th 2006 and June 19th -August 18th 2007. Both, GERB-1 and VAS data are used to train and validate the AAN model. The same data set is also used to develop and validate a Multivariate Linear Regression (MLR) model. A comparison between the estimates provided by the AAN and the MLR models has been carried out; the results obtained with the neural model outperform the linear model. Moreover, the low values of the error indexes show that neural models can be used as an alternative methodology to make atmospheric corrections.

  12. NET.EXCEL - a European thematic network for suggesting and prioritising future joint R and D projects

    Energy Technology Data Exchange (ETDEWEB)

    Svemar, C. [Svensk Kaernbraenslehantering AB (Sweden); Brewitz, W. [Gesellschaft fuer Anlagen- und Reaktorsicherheit (GRS) mbH (Germany)

    2004-07-01

    The NET.EXCEL project concerns the forming of a network of European end users for analysing the present status and future needs in research, technical development and demonstration (RTD) for the disposal of highly radioactive waste in the three classical rock media: salt, clay/clay sediments and crystalline rock. The aim is to generate values additional to that gained by the individual participants: Svensk Kaernbraenslehantering AB (Sweden), Posiva Oy (Finland), Empresa Nacional de Residuos Radioactivos SA (Spain), Gesellschaft fuer Anlagen- und Reaktorsicherheit mbH (Germany), Agence nationale pour la gestion des dechets radioactifs (France), Nationale Genossenschaft fuer die Lagerung radioaktiver Abfaelle (Swizerland), Organisme National des Dechets Radioactifs et des Matieres Fissiles Enrichies (Belgium) and United Kingdom Nirex Limited (UK). The practical way to carry out the needed RTD-activities and the principles behind the process to establish priorities for the necessary RTD-work is quite similar among the participants. Common ground has been analysed for the role/responsibilities of the participating organisations, for the establishment of priorities for the RTD work and for the modus operandi of the organisations to carry out the RTD. The issue of prioritising the potential RTD activities and the factors taken into account by the participating organisations have been summarised and analysed with respect to the common denominator in the project. (orig.)

  13. A 3D Active Learning Application for NeMO-Net, the NASA Neural Multi-Modal Observation and Training Network for Global Coral Reef Assessment

    Science.gov (United States)

    van den Bergh, Jarrett; Schutz, Joey; Li, Alan; Chirayath, Ved

    2017-01-01

    NeMO-Net, the NASA neural multi-modal observation and training network for global coral reef assessment, is an open-source deep convolutional neural network and interactive active learning training software aiming to accurately assess the present and past dynamics of coral reef ecosystems through determination of percent living cover and morphology as well as mapping of spatial distribution. We present an interactive video game prototype for tablet and mobile devices where users interactively label morphology classifications over mm-scale 3D coral reef imagery captured using fluid lensing to create a dataset that will be used to train NeMO-Nets convolutional neural network. The application currently allows for users to classify preselected regions of coral in the Pacific and will be expanded to include additional regions captured using our NASA FluidCam instrument, presently the highest-resolution remote sensing benthic imaging technology capable of removing ocean wave distortion, as well as lower-resolution airborne remote sensing data from the ongoing NASA CORAL campaign. Active learning applications present a novel methodology for efficiently training large-scale Neural Networks wherein variances in identification can be rapidly mitigated against control data. NeMO-Net periodically checks users input against pre-classified coral imagery to gauge their accuracy and utilize in-game mechanics to provide classification training. Users actively communicate with a server and are requested to classify areas of coral for which other users had conflicting classifications and contribute their input to a larger database for ranking. In partnering with Mission Blue and IUCN, NeMO-Net leverages an international consortium of subject matter experts to classify areas of confusion identified by NeMO-Net and generate additional labels crucial for identifying decision boundary locations in coral reef assessment.

  14. NeMO-Net: The Neural Multi-Modal Observation and Training Network for Global Coral Reef Assessment

    Science.gov (United States)

    Chirayath, Ved

    2017-01-01

    In the past decade, coral reefs worldwide have experienced unprecedented stresses due to climate change, ocean acidification, and anthropomorphic pressures, instigating massive bleaching and die-off of these fragile and diverse ecosystems. Furthermore, remote sensing of these shallow marine habitats is hindered by ocean wave distortion, refraction and optical attenuation, leading invariably to data products that are often of low resolution and signal-to-noise (SNR) ratio. However, recent advances in UAV and Fluid Lensing technology have allowed us to capture multispectral 3D imagery of these systems at sub-cm scales from above the water surface, giving us an unprecedented view of their growth and decay. Exploiting the fine-scaled features of these datasets, machine learning methods such as MAP, PCA, and SVM can not only accurately classify the living cover and morphology of these reef systems (below 8 percent error), but are also able to map the spectral space between airborne and satellite imagery, augmenting and improving the classification accuracy of previously low-resolution datasets. We are currently implementing NeMO-Net, the first open-source deep convolutional neural network (CNN) and interactive active learning and training software to accurately assess the present and past dynamics of coral reef ecosystems through determination of percent living cover and morphology. NeMO-Net will be built upon the QGIS platform to ingest UAV, airborne and satellite datasets from various sources and sensor capabilities, and through data-fusion determine the coral reef ecosystem makeup globally at unprecedented spatial and temporal scales. To achieve this, we will exploit virtual data augmentation, the use of semi-supervised learning, and active learning through a tablet platform allowing for users to manually train uncertain or difficult to classify datasets. The project will make use of Pythons extensive libraries for machine learning, as well as extending integration

  15. Behind the data: Establishing the Network for Surveillance for Pneumococcal Diseases in the East African Region, netSPEAR

    Science.gov (United States)

    Amos, Ben; Kisakye, Annet; Makewa, Douglas; Mudhune, Sandra; Mwamtemi, Hadija; Nansera, Dennis; Ngwiri, Thomas; Wamae, Maranga; English, Mike

    2009-01-01

    In a region with high rates of mortality among children aged <5 years, the underfunded health care systems of sub-Saharan Africa have few resources available to perform surveillance activities that can help determine the causes of morbidity and mortality in the region. At present, there are few examples of attempts to promote public health care surveillance that might inform current debates about how to expand and improve surveillance, particularly for bacterial diseases. Driven by this gap in knowledge, we attempted to explore the successes and failures of the Network for Surveillance of Pneumococcal Disease in the East African Region and to share the experiences of what are essentially non research public-sector hospitals in East Africa, with the hopes that surveillance systems for other diseases, especially those that require complex diagnostic support, may be informed by these experiences. The state of services essential for surveillance and the measures taken to overcome any shortcomings are described, as is the progress made in improving clinical diagnosis, laboratory processing, and data management. For surveillance to play a role in public health care, ministries of health and associated institutions must own and push forward the surveillance agenda, with support from global partners, and take advantage of the developments that have been achieved within the institutions. PMID:19191612

  16. The new WegenerNet climate station network web portal - A gateway to over 10 years of high-resolution precipitation data

    Science.gov (United States)

    Fuchsberger, Jürgen; Kirchengast, Gottfried; Bichler, Christoph; Kabas, Thomas; Lenz, Gunther; Leuprecht, Armin

    2017-04-01

    The Feldbach region in southeast Austria, characteristic for experiencing a rich variety of weather and climate patterns, has been selected as the focus area for a pioneering weather and climate observation network at very high resolution: The WegenerNet comprises 153 meteorological stations measuring temperature, humidity, precipitation, and other parameters, in a tightly spaced grid within an area of about 20 km × 15 km centered near the city of Feldbach (46.93°N, 15.90°E). With its stations about every 2 km2, each with 5-min time sampling, the network provides regular measurements since January 2007. Detailed information is available in the recent description by Kirchengast et al. (2014) and via www.wegcenter.at/wegenernet. As a smaller "sister network" of the WegenerNet Feldbach region, the WegenerNet Johnsbachtal consists of eleven meteorological stations (complemented by one hydrographic station at the Johnsbach creek), measuring temperature, humidity, precipitation, radiation, wind, and other parameters in an alpine setting at altitudes ranging from below 700 m to over 2100 m. Data are available partly since 2007, partly since more recent dates and have a temporal resolution of 10 minutes. The networks are set to serve as a long-term monitoring and validation facility for weather and climate research and applications. Uses include validation of nonhydrostatic models operated at 1-km-scale resolution and of statistical downscaling techniques (in particular for precipitation), validation of radar and satellite data, study of orography-climate relationships, and many others. Quality-controlled station time series and gridded field data (spacing 200 m × 200 m) are available in near-real time (data latency less than 1-2 h) for visualization and download via a data portal (www.wegenernet.org). This data portal has been undergoing a complete renewal over the last year, and now serves as a modern gateway to the WegenerNet's more than 10 years of high

  17. An overview of the first decade of PollyNET: an emerging network of automated Raman-polarization lidars for continuous aerosol profiling

    Directory of Open Access Journals (Sweden)

    H. Baars

    2016-04-01

    Full Text Available A global vertically resolved aerosol data set covering more than 10 years of observations at more than 20 measurement sites distributed from 63° N to 52° S and 72° W to 124° E has been achieved within the Raman and polarization lidar network PollyNET. This network consists of portable, remote-controlled multiwavelength-polarization-Raman lidars (Polly for automated and continuous 24/7 observations of clouds and aerosols. PollyNET is an independent, voluntary, and scientific network. All Polly lidars feature a standardized instrument design with different capabilities ranging from single wavelength to multiwavelength systems, and now apply unified calibration, quality control, and data analysis. The observations are processed in near-real time without manual intervention, and are presented online at http://polly.tropos.de/. The paper gives an overview of the observations on four continents and two research vessels obtained with eight Polly systems. The specific aerosol types at these locations (mineral dust, smoke, dust-smoke and other dusty mixtures, urban haze, and volcanic ash are identified by their Ångström exponent, lidar ratio, and depolarization ratio. The vertical aerosol distribution at the PollyNET locations is discussed on the basis of more than 55 000 automatically retrieved 30 min particle backscatter coefficient profiles at 532 nm as this operating wavelength is available for all Polly lidar systems. A seasonal analysis of measurements at selected sites revealed typical and extraordinary aerosol conditions as well as seasonal differences. These studies show the potential of PollyNET to support the establishment of a global aerosol climatology that covers the entire troposphere.

  18. NetView: a high-definition network-visualization approach to detect fine-scale population structures from genome-wide patterns of variation.

    Science.gov (United States)

    Neuditschko, Markus; Khatkar, Mehar S; Raadsma, Herman W

    2012-01-01

    High-throughput sequencing and single nucleotide polymorphism (SNP) genotyping can be used to infer complex population structures. Fine-scale population structure analysis tracing individual ancestry remains one of the major challenges. Based on network theory and recent advances in SNP chip technology, we investigated an unsupervised network clustering method called Super Paramagnetic Clustering (Spc). When applied to whole-genome marker data it identifies the natural divisions of groups of individuals into population clusters without use of prior ancestry information. Furthermore, we optimised an analysis pipeline called NetView, a high-definition network visualization, starting with computation of genetic distance, followed clustering using Spc and finally visualization of clusters with Cytoscape. We compared NetView against commonly used methodologies including Principal Component Analyses (PCA) and a model-based algorithm, Admixture, on whole-genome-wide SNP data derived from three previously described data sets: simulated (2.5 million SNPs, 5 populations), human (1.4 million SNPs, 11 populations) and cattle (32,653 SNPs, 19 populations). We demonstrate that individuals can be effectively allocated to their correct population whilst simultaneously revealing fine-scale structure within the populations. Analyzing the human HapMap populations, we identified unexpected genetic relatedness among individuals, and population stratification within the Indian, African and Mexican samples. In the cattle data set, we correctly assigned all individuals to their respective breeds and detected fine-scale population sub-structures reflecting different sample origins and phenotypes. The NetView pipeline is computationally extremely efficient and can be easily applied on large-scale genome-wide data sets to assign individuals to particular populations and to reproduce fine-scale population structures without prior knowledge of individual ancestry. NetView can be used on any

  19. An overview of the first decade of PollyNET: an emerging network of automated Raman-polarization lidars for continuous aerosol profiling

    Science.gov (United States)

    Baars, Holger; Kanitz, Thomas; Engelmann, Ronny; Althausen, Dietrich; Heese, Birgit; Komppula, Mika; Preißler, Jana; Tesche, Matthias; Ansmann, Albert; Wandinger, Ulla; Lim, Jae-Hyun; Ahn, Joon Young; Stachlewska, Iwona S.; Amiridis, Vassilis; Marinou, Eleni; Seifert, Patric; Hofer, Julian; Skupin, Annett; Schneider, Florian; Bohlmann, Stephanie; Foth, Andreas; Bley, Sebastian; Pfüller, Anne; Giannakaki, Eleni; Lihavainen, Heikki; Viisanen, Yrjö; Hooda, Rakesh Kumar; Nepomuceno Pereira, Sérgio; Bortoli, Daniele; Wagner, Frank; Mattis, Ina; Janicka, Lucja; Markowicz, Krzysztof M.; Achtert, Peggy; Artaxo, Paulo; Pauliquevis, Theotonio; Souza, Rodrigo A. F.; Prakesh Sharma, Ved; Gideon van Zyl, Pieter; Beukes, Johan Paul; Sun, Junying; Rohwer, Erich G.; Deng, Ruru; Mamouri, Rodanthi-Elisavet; Zamorano, Felix

    2016-04-01

    A global vertically resolved aerosol data set covering more than 10 years of observations at more than 20 measurement sites distributed from 63° N to 52° S and 72° W to 124° E has been achieved within the Raman and polarization lidar network PollyNET. This network consists of portable, remote-controlled multiwavelength-polarization-Raman lidars (Polly) for automated and continuous 24/7 observations of clouds and aerosols. PollyNET is an independent, voluntary, and scientific network. All Polly lidars feature a standardized instrument design with different capabilities ranging from single wavelength to multiwavelength systems, and now apply unified calibration, quality control, and data analysis. The observations are processed in near-real time without manual intervention, and are presented online at http://polly.tropos.de/. The paper gives an overview of the observations on four continents and two research vessels obtained with eight Polly systems. The specific aerosol types at these locations (mineral dust, smoke, dust-smoke and other dusty mixtures, urban haze, and volcanic ash) are identified by their Ångström exponent, lidar ratio, and depolarization ratio. The vertical aerosol distribution at the PollyNET locations is discussed on the basis of more than 55 000 automatically retrieved 30 min particle backscatter coefficient profiles at 532 nm as this operating wavelength is available for all Polly lidar systems. A seasonal analysis of measurements at selected sites revealed typical and extraordinary aerosol conditions as well as seasonal differences. These studies show the potential of PollyNET to support the establishment of a global aerosol climatology that covers the entire troposphere.

  20. LOGO-Net: Large-scale Deep Logo Detection and Brand Recognition with Deep Region-based Convolutional Networks

    OpenAIRE

    Hoi, Steven C. H.; Wu, Xiongwei; Liu, Hantang; Wu, Yue; Wang, Huiqiong; Xue, Hui; Wu, Qiang

    2015-01-01

    Logo detection from images has many applications, particularly for brand recognition and intellectual property protection. Most existing studies for logo recognition and detection are based on small-scale datasets which are not comprehensive enough when exploring emerging deep learning techniques. In this paper, we introduce "LOGO-Net", a large-scale logo image database for logo detection and brand recognition from real-world product images. To facilitate research, LOGO-Net has two datasets: ...

  1. Program NetMoment; Simultaneous Calculation of Moment, Source Corner Frequency, and Site Specific t* from Network Recordings

    Energy Technology Data Exchange (ETDEWEB)

    Hutchings, L

    2001-12-12

    The purpose of computer program NetMoment (Appendix I) is to utilize fundamental knowledge of earthquake sources, propagation attenuation, and site response in a simultaneous inversion of network data to determine the moment and source corner frequency of earthquakes, and site specific t*. The source parameters are especially difficult to determine for small earthquakes. A fundamental problem in determining the source corner frequencies of small earthquakes is that site response can result in spectral corner frequencies in the range that may be expected from the earthquakes themselves. Several authors have identified this as fmax (Hanks, 1982), a constant corner frequency for small events so that below threshold moment (about 1.0 x 10{sup 21} dyne-cm) the corner frequency remains constant the size of events diminishes. Hutchings and Wu (1990) found that for the southern California region, events with moment less than about 1.5 x 10{sup 21} dyne-cm (about magnitude 3.4) show no source effect in their spectra. Hanks (1982) found the threshold to be about 1.0 x l0{sup 21} dyne-cm for other southern California sites. Baise et al. (2002) found borehole recordings on Yerba Buena Island, in San Francisco Bay, to have corner frequencies limited to about 3-5 Hz for M < 4.0 earthquakes in the region. Some authors have attributed this to a minimum source dimension for earthquakes, which results in a decrease in stress drop for smaller events (Archuleta et al., 1982; Papageorgiou and Aki, 1983). alternative explanation is that the constant corner frequencies result from whole path or near site attenuation and/or amplifications due to soil response. This is supported by a wide body of literature (Anderson and Hough, 1984, Hutchings and Wu, 1990, Blakeslee and Malin, 1991; Aster and Shearer, 1991; Abercrombie, 1995). Abercrombie, for example, estimated source corner frequencies from events recorded in granite at a depth of 2.5 Km in the Cajon Pass scientific drill hole and

  2. Few-Nucleon Systems

    Science.gov (United States)

    Viviani, Michele

    The recent theoretical advances in the study of the statical and dynamical properties of few-nucleon systems are here reported, with particular attention to the research activities performed under the Italian MURST-PRIN project FISICA DEL NUCLEO E DEI SISTEMI A PIÙ CORPI. The latter studies also include the development of methods for dealing with pionic degrees of freedom, the determination of static properties of light nuclei, and the computation of few-nucleon reaction observables, including electroweak processes.

  3. Eddy covariance flux measurements of net ecosystem carbon dioxide exchange from a lowland peatland flux tower network in England and Wales

    Science.gov (United States)

    Morrison, Ross; Balzter, Heiko; Burden, Annette; Callaghan, Nathan; Cumming, Alenander; Dixon, Simon; Evans, Jonathan; Kaduk, Joerg; Page, Susan; Pan, Gong; Rayment, Mark; Ridley, Luke; Rylett, Daniel; Worrall, Fred; Evans, Christopher

    2016-04-01

    Peatlands store disproportionately large amounts of soil carbon relative to other terrestrial ecosystems. Over recent decades, the large amount of carbon stored as peat has proved vulnerable to a range of land use pressures as well as the increasing impacts of climate change. In temperate Europe and elsewhere, large tracts of lowland peatland have been drained and converted to agricultural land use. Such changes have resulted in widespread losses of lowland peatland habitat, land subsidence across extensive areas and the transfer of historically accumulated soil carbon to the atmosphere as carbon dioxide (CO2). More recently, there has been growth in activities aiming to reduce these impacts through improved land management and peatland restoration. Despite a long history of productive land use and management, the magnitude and controls on greenhouse gas emissions from lowland peatland environments remain poorly quantified. Here, results of surface-atmosphere measurements of net ecosystem CO2 exchange (NEE) from a network of seven eddy covariance (EC) flux towers located at a range of lowland peatland ecosystems across the United Kingdom (UK) are presented. This spatially-dense peatland flux tower network forms part of a wider observation programme aiming to quantify carbon, water and greenhouse gas balances for lowland peatlands across the UK. EC measurements totalling over seventeen site years were obtained at sites exhibiting large differences in vegetation cover, hydrological functioning and land management. The sites in the network show remarkable spatial and temporal variability in NEE. Across sites, annual NEE ranged from a net sink of -194 ±38 g CO2-C m-2 yr-1 to a net source of 784±70 g CO2-C m-2 yr-1. The results suggest that semi-natural sites remain net sinks for atmospheric CO2. Sites that are drained for intensive agricultural production range from a small net sink to the largest observed source for atmospheric CO2 within the flux tower network

  4. NetSig

    DEFF Research Database (Denmark)

    Horn, Heiko; Lawrence, Michael S; Chouinard, Candace R

    2018-01-01

    Methods that integrate molecular network information and tumor genome data could complement gene-based statistical tests to identify likely new cancer genes; but such approaches are challenging to validate at scale, and their predictive value remains unclear. We developed a robust statistic (Net......Sig) that integrates protein interaction networks with data from 4,742 tumor exomes. NetSig can accurately classify known driver genes in 60% of tested tumor types and predicts 62 new driver candidates. Using a quantitative experimental framework to determine in vivo tumorigenic potential in mice, we found that Net......Sig candidates induce tumors at rates that are comparable to those of known oncogenes and are ten-fold higher than those of random genes. By reanalyzing nine tumor-inducing NetSig candidates in 242 patients with oncogene-negative lung adenocarcinomas, we find that two (AKT2 and TFDP2) are significantly amplified...

  5. Ensuring Patient Safety by using Colored Petri Net Simulation in the Design of Heterogeneous, Multi-Vendor, Integrated, Life-Critical Wireless (802.x) Patient Care Device Networks.

    Science.gov (United States)

    Sloane, Elliot; Gehlot, Vijay

    2005-01-01

    Hospitals and manufacturers are designing and deploying the IEEE 802.x wireless technologies in medical devices to promote patient mobility and flexible facility use. There is little information, however, on the reliability or ultimate safety of connecting multiple wireless life-critical medical devices from multiple vendors using commercial 802.11a, 802.11b, 802.11g or pre-802.11n devices. It is believed that 802.11-type devices can introduce unintended life-threatening risks unless delivery of critical patient alarms to central monitoring systems and/or clinical personnel is assured by proper use of 802.11e Quality of Service (QoS) methods. Petri net tools can be used to simulate all possible states and transitions between devices and/or systems in a wireless device network, and can identify failure modes in advance. Colored Petri Net (CPN) tools are ideal, in fact, as they allow tracking and controlling each message in a network based on pre-selected criteria. This paper describes a research project using CPN to simulate and validate alarm integrity in a small multi-modality wireless patient monitoring system. A 20-monitor wireless patient monitoring network is created in two versions: one with non-prioritized 802.x CSM protocols and the second with simulated Quality of Service (QoS) capabilities similar to 802.11e (i.e., the second network allows message priority management.) In the standard 802.x network, dangerous heart arrhythmia and pulse oximetry alarms could not be reliably and rapidly communicated, but the second network's QoS priority management reduced that risk significantly.

  6. Few-Nucleon Systems

    Science.gov (United States)

    Kievsky, A.

    2005-04-01

    Recent advances in the theoretical description of few-nucleon systems are reported. This research activity has been performed under the Italian project FISICA TEORICA DEL NUCLEO E DEI SISTEMI A MOLTI CORPI. Bound and scattering states as well as specific reactions are analyzed in connection with the current experimental activity.

  7. International Clean Energy System Using Hydrogen Conversion (WE-NET). subtask 3. Study on the global network; Suiso riyo kokusai clean energy system gijutsu (WE-NET). subtask 3. Global network kenkyu

    Energy Technology Data Exchange (ETDEWEB)

    NONE

    1997-03-01

    As a part of the WE-NET project, the introduction condition of hydrogen as substituting energy and CO2 reduction effect were analyzed using a global energy model. The WE-NET project aims at global-wide introduction of clean energy by converting abundant renewable clean energy into hydrogen transportable to distant consumers all over the world. The study result in fiscal 1996 is as follows. Undeveloped hydroelectric resources in the world are estimated to be 12 trillion kWh/y equivalent to the existing developed one in the world. Since the cost of the hydroelectric power generation projects over 1000MW in the planning stage is estimated to be 0.02-0.05$/kWh lower than that of other renewable energies, such projects are expected as energy source in the initial stage of the practical WE-NET project. The GREEN model was modified by adding a hydrogen analysis function, and extending an analysis period. The modified model allowed evaluation of the long-term important role of hydrogen energy, in particular, the capability of CO2 gas reduction all over the world. 28 refs., 92 figs., 56 tabs.

  8. Physics in few dimensions

    Energy Technology Data Exchange (ETDEWEB)

    Emery, V.J.

    1981-03-01

    This article is a qualitative account of some aspects of physics in few dimensions, and its relationship to nonlinear field theories. After a survey of materials and some of the models that have been used to describe them, the various methods of solution are compared and contrasted. The roles of exact results, operator representations and the renormalization group transformation are described, and a uniform picture of the behavior of low-dimensional systems is presented.

  9. Few-body physics

    Energy Technology Data Exchange (ETDEWEB)

    Briceno, Raul [Thomas Jefferson National Accelerator Facility (TJNAF), Newport News, VA (United States)

    2015-05-01

    Few-body hadronic observables play an essential role in a wide number of processes relevant for both particle and nuclear physics. In order for Lattice QCD to offer insight into the interpretation of few-body states, a theoretical infrastructure must be developed to map Euclidean-time correlation functions to the desired Minkowski-time few-body observables. In this talk, I will first review the formal challenges associated with the studies of such systems via Lattice QCD, as first introduced by Maiani and Testa, and then review methodology to circumvent said limitations. The first main example of the latter is the formalism of Luscher to analyze elastic scattering and a second is the method of Lellouch & Luscher to analyze weak decays. I will then proceed to discus recent theoretical generalizations of these frameworks that allow for the determination of scattering amplitudes, resonances, transition and elastic form factors. Finally, I will outline outstanding problems, including those that are now beginning to be addressed.

  10. GEM2Net: from gene expression modeling to -omics networks, a new CATdb module to investigate Arabidopsis thaliana genes involved in stress response.

    Science.gov (United States)

    Zaag, Rim; Tamby, Jean Philippe; Guichard, Cécile; Tariq, Zakia; Rigaill, Guillem; Delannoy, Etienne; Renou, Jean-Pierre; Balzergue, Sandrine; Mary-Huard, Tristan; Aubourg, Sébastien; Martin-Magniette, Marie-Laure; Brunaud, Véronique

    2015-01-01

    CATdb (http://urgv.evry.inra.fr/CATdb) is a database providing a public access to a large collection of transcriptomic data, mainly for Arabidopsis but also for other plants. This resource has the rare advantage to contain several thousands of microarray experiments obtained with the same technical protocol and analyzed by the same statistical pipelines. In this paper, we present GEM2Net, a new module of CATdb that takes advantage of this homogeneous dataset to mine co-expression units and decipher Arabidopsis gene functions. GEM2Net explores 387 stress conditions organized into 18 biotic and abiotic stress categories. For each one, a model-based clustering is applied on expression differences to identify clusters of co-expressed genes. To characterize functions associated with these clusters, various resources are analyzed and integrated: Gene Ontology, subcellular localization of proteins, Hormone Families, Transcription Factor Families and a refined stress-related gene list associated to publications. Exploiting protein-protein interactions and transcription factors-targets interactions enables to display gene networks. GEM2Net presents the analysis of the 18 stress categories, in which 17,264 genes are involved and organized within 681 co-expression clusters. The meta-data analyses were stored and organized to compose a dynamic Web resource. © The Author(s) 2014. Published by Oxford University Press on behalf of Nucleic Acids Research.

  11. Net Locality

    DEFF Research Database (Denmark)

    de Souza e Silva, Adriana Araujo; Gordon, Eric

    Provides an introduction to the new theory of Net Locality and the profound effect on individuals and societies when everything is located or locatable. Describes net locality as an emerging form of location awareness central to all aspects of digital media, from mobile phones, to Google Maps...... of emerging technologies, from GeoCities to GPS, Wi-Fi, Wiki Me, and Google Android....

  12. Net Neutrality

    DEFF Research Database (Denmark)

    Savin, Andrej

    2017-01-01

    Repealing “net neutrality” in the US will have no bearing on Internet freedom or security there or anywhere else.......Repealing “net neutrality” in the US will have no bearing on Internet freedom or security there or anywhere else....

  13. NetTurnP--neural network prediction of beta-turns by use of evolutionary information and predicted protein sequence features.

    Directory of Open Access Journals (Sweden)

    Bent Petersen

    Full Text Available UNLABELLED: β-turns are the most common type of non-repetitive structures, and constitute on average 25% of the amino acids in proteins. The formation of β-turns plays an important role in protein folding, protein stability and molecular recognition processes. In this work we present the neural network method NetTurnP, for prediction of two-class β-turns and prediction of the individual β-turn types, by use of evolutionary information and predicted protein sequence features. It has been evaluated against a commonly used dataset BT426, and achieves a Matthews correlation coefficient of 0.50, which is the highest reported performance on a two-class prediction of β-turn and not-β-turn. Furthermore NetTurnP shows improved performance on some of the specific β-turn types. In the present work, neural network methods have been trained to predict β-turn or not and individual β-turn types from the primary amino acid sequence. The individual β-turn types I, I', II, II', VIII, VIa1, VIa2, VIba and IV have been predicted based on classifications by PROMOTIF, and the two-class prediction of β-turn or not is a superset comprised of all β-turn types. The performance is evaluated using a golden set of non-homologous sequences known as BT426. Our two-class prediction method achieves a performance of: MCC=0.50, Qtotal=82.1%, sensitivity=75.6%, PPV=68.8% and AUC=0.864. We have compared our performance to eleven other prediction methods that obtain Matthews correlation coefficients in the range of 0.17-0.47. For the type specific β-turn predictions, only type I and II can be predicted with reasonable Matthews correlation coefficients, where we obtain performance values of 0.36 and 0.31, respectively. CONCLUSION: The NetTurnP method has been implemented as a webserver, which is freely available at http://www.cbs.dtu.dk/services/NetTurnP/. NetTurnP is the only available webserver that allows submission of multiple sequences.

  14. NetMap - Creating a Map of Application Layer QoS Metrics of Mobile Networks Using Crowd Sourcing

    DEFF Research Database (Denmark)

    Mikkelsen, Lars Møller; Thomsen, Steffen Riber; Pedersen, Michael Sølvkjær

    2014-01-01

    on crowd sourcing, that utilizes end user smart devices in automatically measuring and gathering network performance metrics on mobile networks. Metrics measured include throughput, round trip times, connectivity, and signal strength, and are accompanied by a wide range of context information about...

  15. GeoSteamNet: A computer code to simulate geothermal steam flow in a pipeline network; GeoSteamNet: Programa de computo para simular el flujo de vapor geotermico de una red de vaporductos

    Energy Technology Data Exchange (ETDEWEB)

    Verma P., Mahendra; Aragon A., Alfonso [Instituto de Investigaciones Electricas, Cuernavaca, Morelos (Mexico)]. E-mail: mahendra@iie.org.mx; Ruiz L., Alejando; Mendoza C., Alfredo [Comision Federal de Electricidad, Campo Geotermico Los Azufres, Campamento Agua Fria, Michoacan (Mexico)

    2011-07-15

    A computer package, GeoSteamNet, was developed to simulate steam transport in a pipeline network of a geothermal field. The fluid motion is governed by the following basic principles: conservation of mass, linear momentum principle (Newton's second law or the Navier Stokes equations), and the first and second laws of thermodynamics. The second law of thermodynamics defines the direction of a spontaneous process, which is indirectly validated in the algorithm as vapor flows from high-to-low pressure, and heat flows from high-to-low temperatures. The nonlinear equations are solved with the Newton-Raphson method. Using the ActiveX component OrificeMeter, the steam-flow balance was calculated for power plants U-15 and U-16 in Los Azufres Geothermal Field, Mich., in February 2009. U-15 was fed by the production wells AZ-04, AZ-28, AZ-30, AZ-65D, and AZ-66, whereas wells AZ-28A, AZ-45, AZ-56, AZ-67, AZ-69D were connected to U-16. The analytical error is within {+-}4%, which is acceptable for practical purposes for steam-supply management, considering the uncertainties in parameters, such as pressure, temperature, pressure fluctuation at the wellhead, etc. The steam simulation results by GeoSteamNet for a hypothetical-pipeline network in a geothermal system with two production wells and a power plant illustrate its functionality. Several points need to be emphasized. For a specific geometry-pipeline network, there is only a certain amount of mass (vapor) that can be transported at a given pressure at the wellheads and the power plant. The construction and modification of a pipeline network is very expensive and the production of geothermal wells depends on many natural factors; therefore, there is need to conduct a tolerance study for each component of the network. A simulation study of the virtual-pipeline network for the design of a geothermal power plant can save money, effort, and time. [Spanish] Se desarrollo un paquete de computo, GeoSteamNet, para simular el

  16. A Novel Petri Nets-Based Modeling Method for the Interaction between the Sensor and the Geographic Environment in Emerging Sensor Networks

    Science.gov (United States)

    Zhang, Feng; Xu, Yuetong; Chou, Jarong

    2016-01-01

    The service of sensor device in Emerging Sensor Networks (ESNs) is the extension of traditional Web services. Through the sensor network, the service of sensor device can communicate directly with the entity in the geographic environment, and even impact the geographic entity directly. The interaction between the sensor device in ESNs and geographic environment is very complex, and the interaction modeling is a challenging problem. This paper proposed a novel Petri Nets-based modeling method for the interaction between the sensor device and the geographic environment. The feature of the sensor device service in ESNs is more easily affected by the geographic environment than the traditional Web service. Therefore, the response time, the fault-tolerant ability and the resource consumption become important factors in the performance of the whole sensor application system. Thus, this paper classified IoT services as Sensing services and Controlling services according to the interaction between IoT service and geographic entity, and classified GIS services as data services and processing services. Then, this paper designed and analyzed service algebra and Colored Petri Nets model to modeling the geo-feature, IoT service, GIS service and the interaction process between the sensor and the geographic enviroment. At last, the modeling process is discussed by examples. PMID:27681730

  17. A Novel Petri Nets-Based Modeling Method for the Interaction between the Sensor and the Geographic Environment in Emerging Sensor Networks.

    Science.gov (United States)

    Zhang, Feng; Xu, Yuetong; Chou, Jarong

    2016-09-25

    The service of sensor device in Emerging Sensor Networks (ESNs) is the extension of traditional Web services. Through the sensor network, the service of sensor device can communicate directly with the entity in the geographic environment, and even impact the geographic entity directly. The interaction between the sensor device in ESNs and geographic environment is very complex, and the interaction modeling is a challenging problem. This paper proposed a novel Petri Nets-based modeling method for the interaction between the sensor device and the geographic environment. The feature of the sensor device service in ESNs is more easily affected by the geographic environment than the traditional Web service. Therefore, the response time, the fault-tolerant ability and the resource consumption become important factors in the performance of the whole sensor application system. Thus, this paper classified IoT services as Sensing services and Controlling services according to the interaction between IoT service and geographic entity, and classified GIS services as data services and processing services. Then, this paper designed and analyzed service algebra and Colored Petri Nets model to modeling the geo-feature, IoT service, GIS service and the interaction process between the sensor and the geographic enviroment. At last, the modeling process is discussed by examples.

  18. Net analyte signal-based simultaneous determination of antazoline and naphazoline using wavelength region selection by experimental design-neural networks.

    Science.gov (United States)

    Hemmateenejad, Bahram; Ghavami, Raoof; Miri, Ramin; Shamsipur, Majtaba

    2006-02-15

    Net analyte signal (NAS)-based multivariate calibration methods were employed for simultaneous determination of anthazoline and naphazoline. The NAS vectors calculated from the absorbance data of the drugs mixture were used as input for classical least squares (CLS), principal component and partial least squares regression PCR and PLS methods. A wavelength selection strategy was used to find the best wavelength region for each drug separately. As a new procedure, we proposed an experimental design-neural network strategy for wavelength region optimization. By use of a full factorial design method, some different wavelength regions were selected by taking into account different spectral parameters including the starting wavelength, the ending wavelength and the wavelength interval. The performance of all the multivariate calibration methods, in all selected wavelength regions for both drugs, was evaluated by calculating a fitness function based on the root mean square error of calibration and validation. A three-layered feed-forward artificial neural network (ANN) model with back-propagation learning algorithm was employed to model the nonlinear relationship between the spectral parameters and fitness of each regression method. From the resulted ANN models, the spectral regions in which lowest fitness could be obtained were chosen. Comparison of the results revealed that the net NAS-PLS resulted in lower prediction error than the other models. The proposed NAS-based calibration method was successfully applied to the simultaneous analyses of anthazoline and naphazoline in a commercial eye drop sample.

  19. A Novel Petri Nets-Based Modeling Method for the Interaction between the Sensor and the Geographic Environment in Emerging Sensor Networks

    Directory of Open Access Journals (Sweden)

    Feng Zhang

    2016-09-01

    Full Text Available The service of sensor device in Emerging Sensor Networks (ESNs is the extension of traditional Web services. Through the sensor network, the service of sensor device can communicate directly with the entity in the geographic environment, and even impact the geographic entity directly. The interaction between the sensor device in ESNs and geographic environment is very complex, and the interaction modeling is a challenging problem. This paper proposed a novel Petri Nets-based modeling method for the interaction between the sensor device and the geographic environment. The feature of the sensor device service in ESNs is more easily affected by the geographic environment than the traditional Web service. Therefore, the response time, the fault-tolerant ability and the resource consumption become important factors in the performance of the whole sensor application system. Thus, this paper classified IoT services as Sensing services and Controlling services according to the interaction between IoT service and geographic entity, and classified GIS services as data services and processing services. Then, this paper designed and analyzed service algebra and Colored Petri Nets model to modeling the geo-feature, IoT service, GIS service and the interaction process between the sensor and the geographic enviroment. At last, the modeling process is discussed by examples.

  20. NetTurnP – Neural Network Prediction of Beta-turns by Use of Evolutionary Information and Predicted Protein Sequence Features

    DEFF Research Database (Denmark)

    Petersen, Bent; Lundegaard, Claus; Petersen, Thomas Nordahl

    2010-01-01

    is the highest reported performance on a two-class prediction of β-turn and not-β-turn. Furthermore NetTurnP shows improved performance on some of the specific β-turn types. In the present work, neural network methods have been trained to predict β-turn or not and individual β-turn types from the primary amino......β-turns are the most common type of non-repetitive structures, and constitute on average 25% of the amino acids in proteins. The formation of β-turns plays an important role in protein folding, protein stability and molecular recognition processes. In this work we present the neural network method...... NetTurnP, for prediction of two-class β-turns and prediction of the individual β-turn types, by use of evolutionary information and predicted protein sequence features. It has been evaluated against a commonly used dataset BT426, and achieves a Matthews correlation coefficient of 0.50, which...

  1. Superusers in social networks for smoking cessation: analysis of demographic characteristics and posting behavior from the Canadian Cancer Society's smokers' helpline online and StopSmokingCenter.net.

    Science.gov (United States)

    van Mierlo, Trevor; Voci, Sabrina; Lee, Sharon; Fournier, Rachel; Selby, Peter

    2012-06-26

    Online social networks are popular components of behavior-change websites. Research has identified the participation of certain network members who assume leadership roles by providing support, advice, and direction to other members. In the literature, these individuals have been variously defined as key players, posters, active users, or caretakers. Despite their identification, very little research has been conducted on the contributions or demographic characteristics of this population. For this study, we collectively categorized key players, posters, active users, and caretakers as superusers. To analyze data from two large but distinct Web-assisted tobacco interventions (WATI) to help gain insight into superuser demographic characteristics and how they use social networks. We extracted cross-sectional data sets containing posting behaviors and demographic characteristics from a free, publicly funded program (the Canadian Cancer Society's Smokers' Helpline Online: SHO), and a free, privately run program (StopSmokingCenter.net: SSC). Within the reporting period (SHO: June 26, 2008 to October 12, 2010; SSC: May 17, 2007 to October 12, 2010), 21,128 individuals registered for the SHO and 11,418 registered for the SSC. Within the same period, 1670 (7.90%) registrants made at least one post in the SHO social network, and 1627 (14.25%) registrants made at least one post in the SSC social network. SHO and SSC superusers accounted for 0.4% (n = 95) and 1.1% (n = 124) of all registrants, and 5.7% (95/1670) and 7.62% (124/1627) of all social network participants, and contributed to 34.78% (29,422/84,599) and 46.22% (61,820/133,753) of social network content, respectively. Despite vast differences in promotion and group management rules, and contrary to the beliefs of group moderators, there were no statistically significant differences in demographic characteristics between the two superuser groups. To our knowledge, this is the first study that compared demographic

  2. Net Neutrality: Background and Issues

    National Research Council Canada - National Science Library

    Gilroy, Angele A

    2006-01-01

    .... The move to place restrictions on the owners of the networks that compose and provide access to the Internet, to ensure equal access and nondiscriminatory treatment, is referred to as "net neutrality...

  3. Generating Southern Africa Precipitation Forecast Using the FEWS Engine, a New Application for the Google Earth Engine

    Science.gov (United States)

    Landsfeld, M. F.; Hegewisch, K.; Daudert, B.; Morton, C.; Husak, G. J.; Friedrichs, M.; Funk, C. C.; Huntington, J. L.; Abatzoglou, J. T.; Verdin, J. P.

    2016-12-01

    The Famine Early Warning Systems Network (FEWS NET) focuses on food insecurity in developing nations and provides objective, evidence-based analysis to help government decision-makers and relief agencies plan for and respond to humanitarian emergencies. The network of FEWS NET analysts and scientists require flexible, interactive tools to aid in their monitoring and research efforts. Because they often work in bandwidth-limited regions, lightweight Internet tools and services that bypass the need for downloading massive datasets are preferred for their work. To support food security analysis FEWS NET developed a custom interface for the Google Earth Engine (GEE). GEE is a platform developed by Google to support scientific analysis of environmental data in their cloud computing environment. This platform allows scientists and independent researchers to mine massive collections of environmental data, leveraging Google's vast computational resources for purposes of detecting changes and monitoring the Earth's surface and climate. GEE hosts an enormous amount of satellite imagery and climate archives, one of which is the Climate Hazards Group Infrared Precipitation with Stations dataset (CHIRPS). CHIRPS precipitation dataset is a key input for FEWS NET monitoring and forecasting efforts. In this talk we introduce the FEWS Engine interface. We present an application that highlights the utility of FEWS Engine for forecasting the upcoming seasonal precipitation of southern Africa. Specifically, the current state of ENSO is assessed and used to identify similar historical seasons. The FEWS Engine compositing tool is used to examine rainfall and other environmental data for these analog seasons. The application illustrates the unique benefits of using FEWS Engine for on-the-fly food security scenario development.

  4. The Impact of an Authentic Science Experience on STEM Identity: A Preliminary Analysis of YouthAstroNet and MicroObservatory Telescope Network Participant Data

    Science.gov (United States)

    Dussault, Mary E.; Wright, Erika A.; Sadler, Philip; Sonnert, Gerhard; ITEAMS II Team

    2018-01-01

    Encouraging students to pursue careers in science, technology, engineering, and mathematics (STEM) is a high priority for national K-12 education improvement initiatives in the United States. Many educators have claimed that a promising strategy for nurturing early student interest in STEM is to engage them in authentic inquiry experiences. “Authentic” refers to investigations in which the questions are of genuine interest and importance to students, and the inquiry more closely resembles the way real science is done. Science education researchers and practitioners at the Harvard-Smithsonian Center for Astrophysics have put this theory into action with the development of YouthAstroNet, a nationwide online learning community of middle-school aged students, educators, and STEM professionals that features the MicroObservatory Robotic Telescope Network, professional image analysis software, and complementary curricula for use in a variety of learning settings. This preliminary study examines factors that influence YouthAstroNet participants' Science Affinity, STEM Identity, and STEM Career Interest, using the matched pre/post survey results of 261 participants as the data source. The pre/post surveys included some 40 items measuring affinity, identity, knowledge, and career interest. In addition, the post intervention instrument included a number of items in which students reported the instructional strategies they experienced as part of the program. A simple analysis of pre-post changes in affinity and interest revealed very little significant change, and for those items where a small pre-post effect was observed, the average change was most often negative. However, after accounting for students' different program treatment experiences and for their prior attitudes and interests, a predictor of significant student gains in Affinity, STEM Identity, Computer/Math Identity, and STEM Career Interest could be identified. This was the degree to which students reported

  5. The Community Health Applied Research Network (CHARN) Data Warehouse: a Resource for Patient-Centered Outcomes Research and Quality Improvement in Underserved, Safety Net Populations.

    Science.gov (United States)

    Laws, Reesa; Gillespie, Suzanne; Puro, Jon; Van Rompaey, Stephan; Quach, Thu; Carroll, Joseph; Weir, Rosy Chang; Crawford, Phil; Grasso, Chris; Kaleba, Erin; McBurnie, Mary Ann

    2014-01-01

    The Community Health Applied Research Network, funded by the Health Resources and Services Administration, is a research network comprising 18 Community Health Centers organized into four Research Nodes (each including an academic partner) and a data coordinating center. The network represents more than 500,000 diverse safety net patients across 11 states. The primary objective of this paper is to describe the development and implementation process of the CHARN data warehouse. The methods involved regulatory and governance development and approval, development of content and structure of the warehouse and processes for extracting the data locally, performing validation, and finally submitting data to the data coordinating center. Version 1 of the warehouse has been developed. Tables have been added, the population and the years of electronic health records (EHR) have been expanded for Version 2. It is feasible to create a national, centralized data warehouse with multiple Community Health Center partners using different EHR systems. It is essential to allow sufficient time: (1) to develop collaborative, trusting relationships among new partners with varied technology, backgrounds, expertise, and interests; (2) to complete institutional, business, and regulatory review processes; (3) to identify and address technical challenges associated with diverse data environments, practices, and resources; and (4) to provide continuing data quality assessments to ensure data accuracy.

  6. Biological Petri Nets

    CERN Document Server

    Wingender, E

    2011-01-01

    It was suggested some years ago that Petri nets might be well suited to modeling metabolic networks, overcoming some of the limitations encountered by the use of systems employing ODEs (ordinary differential equations). Much work has been done since then which confirms this and demonstrates the usefulness of this concept for systems biology. Petri net technology is not only intuitively understood by scientists trained in the life sciences, it also has a robust mathematical foundation and provides the required degree of flexibility. As a result it appears to be a very promising approach to mode

  7. WegenerNet climate station network region Feldbach/Austria: From local measurements to weather and climate data products at 1 km-scale resolution

    Science.gov (United States)

    Kabas, T.; Leuprecht, A.; Bichler, C.; Kirchengast, G.

    2010-12-01

    South-eastern Austria is characteristic for experiencing a rich variety of weather and climate patterns. For this reason, the county of Feldbach was selected by the Wegener Center as a focus area for a pioneering observation experiment at very high resolution: The WegenerNet climate station network (in brief WegenerNet) comprises 151 meteorological stations within an area of about 20 km × 15 km (~ 1.4 km × 1.4 km station grid). All stations measure the main parameters temperature, humidity and precipitation with 5 minute sampling. Selected further stations include measurements of wind speed and direction completed by soil parameters as well as air pressure and net radiation. The collected data is integrated in an automatic processing system including data transfer, quality control, product generation, and visualization. Each station is equipped with an internet-attached data logger and the measurements are transferred as binary files via GPRS to the WegenerNet server in 1 hour intervals. The incoming raw data files of measured parameters as well as several operating values of the data logger are stored in a relational database (PostgreSQL). Next, the raw data pass the Quality Control System (QCS) in which the data are checked for its technical and physical plausibility (e.g., sensor specifications, temporal and spatial variability). In consideration of the data quality (quality flag), the Data Product Generator (DPG) results in weather and climate data products on various temporal scales (from 5 min to annual) for single stations and regular grids. Gridded data are derived by vertical scaling and squared inverse distance interpolation (1 km × 1 km and 0.01° × 0.01° grids). Both subsystems (QCS and DPG) are realized by the programming language Python. For application purposes the resulting data products are available via the bi-lingual (dt, en) WegenerNet data portal (www.wegenernet.org). At this time, the main interface is still online in a system in which

  8. Derivation of Surface Net Radiation at the Valencia Anchor Station from Top of the Atmosphere Gerb Fluxes by Means of Linear Models and Neural Networks

    Science.gov (United States)

    Geraldo Ferreira, A.; Lopez-Baeza, Ernesto; Velazquez Blazquez, Almudena; Soria-Olivas, Emilio; Serrano Lopez, Antonio J.; Gomez Chova, Juan

    2012-07-01

    In this work, Linear Models (LM) and Artificial Neural Networks (ANN) have been developed to estimate net radiation (RN) at the surface. The models have been developed and evaluated by using the synergy between Geostationary Earth Radiation Budget (GERB-1) and Spinning Enhanced Visible and Infrared Imager (SEVIRI) data, both instruments onboard METEOSAT-9, and ``in situ'' measurements. The data used in this work, corresponding to August 2006 and June to August 2007, proceed from Top of the Atmosphere (TOA) broadband fluxes from GERB-1, every 15 min, and from net radiation at the surface measured, every 10 min, at the Valencia Anchor Station (VAS) area, having measured independently the shortwave and the longwave radiation components (downwelling and upwelling) for different land uses and land cover. The adjustment of both temporal resolutions for the satellite and in situ data was achieved by linear interpolation that showed less standard deviation than the cubic one. The LMs were developed and validated by using satellite TOA RN and ground station surface RN measurements, only considering cloudy free days selected from the ground data. The ANN model was developed both for cloudy and cloudy-free conditions using seven input variables selected for the training/validation sets, namely, hour, day, month, surface RN, solar zenith angle and TOA shortwave and longwave fluxes. Both, LMs and ANNs show remarkably good agreement when compared to surface RN measurements. Therefore, this methodology can be successfully applied to estimate RN at surface from GERB/SEVIRI data.

  9. RESTful NET

    CERN Document Server

    Flanders, Jon

    2008-01-01

    RESTful .NET is the first book that teaches Windows developers to build RESTful web services using the latest Microsoft tools. Written by Windows Communication Foundation (WFC) expert Jon Flanders, this hands-on tutorial demonstrates how you can use WCF and other components of the .NET 3.5 Framework to build, deploy and use REST-based web services in a variety of application scenarios. RESTful architecture offers a simpler approach to building web services than SOAP, SOA, and the cumbersome WS- stack. And WCF has proven to be a flexible technology for building distributed systems not necessa

  10. GXNOR-Net: Training deep neural networks with ternary weights and activations without full-precision memory under a unified discretization framework.

    Science.gov (United States)

    Deng, Lei; Jiao, Peng; Pei, Jing; Wu, Zhenzhi; Li, Guoqi

    2018-02-02

    Although deep neural networks (DNNs) are being a revolutionary power to open up the AI era, the notoriously huge hardware overhead has challenged their applications. Recently, several binary and ternary networks, in which the costly multiply-accumulate operations can be replaced by accumulations or even binary logic operations, make the on-chip training of DNNs quite promising. Therefore there is a pressing need to build an architecture that could subsume these networks under a unified framework that achieves both higher performance and less overhead. To this end, two fundamental issues are yet to be addressed. The first one is how to implement the back propagation when neuronal activations are discrete. The second one is how to remove the full-precision hidden weights in the training phase to break the bottlenecks of memory/computation consumption. To address the first issue, we present a multi-step neuronal activation discretization method and a derivative approximation technique that enable the implementing the back propagation algorithm on discrete DNNs. While for the second issue, we propose a discrete state transition (DST) methodology to constrain the weights in a discrete space without saving the hidden weights. Through this way, we build a unified framework that subsumes the binary or ternary networks as its special cases, and under which a heuristic algorithm is provided at the website https://github.com/AcrossV/Gated-XNOR. More particularly, we find that when both the weights and activations become ternary values, the DNNs can be reduced to sparse binary networks, termed as gated XNOR networks (GXNOR-Nets) since only the event of non-zero weight and non-zero activation enables the control gate to start the XNOR logic operations in the original binary networks. This promises the event-driven hardware design for efficient mobile intelligence. We achieve advanced performance compared with state-of-the-art algorithms. Furthermore, the computational sparsity

  11. Petri Nets

    Indian Academy of Sciences (India)

    Associate Professor of. Computer Science and. Automation at the Indian. Institute of Science,. Bangalore. His research interests are broadly in the areas of stochastic modeling and scheduling methodologies for future factories; and object oriented modeling. GENERAL I ARTICLE. Petri Nets. 1. Overview and Foundations.

  12. Petri Nets

    Indian Academy of Sciences (India)

    Home; Journals; Resonance – Journal of Science Education; Volume 4; Issue 8. Petri Nets - Overview and Foundations. Y Narahari. General Article Volume 4 Issue 8 August 1999 pp ... Author Affiliations. Y Narahari1. Department ot Computer Science and Automation, Indian Institute of Science, Bangalore 560 012, India.

  13. An international network (PlaNet) to evaluate a human placental testing platform for chemicals safety testing in pregnancy

    DEFF Research Database (Denmark)

    Brownbill, Paul; Chernyavsky, Igor; Bottalico, Barbara

    2016-01-01

    in pregnancy and how ex vivo and in vitro human placental models might be advanced to reproducible human placental test systems (HPTSs), refining a weight of evidence to the guidance given around compound risk assessment during pregnancy. The placental pharmacokinetics of xenobiotic transfer, dysregulated...... placental function in pregnancy-related pathologies and influx/efflux transporter polymorphisms are a few caveats that could be addressed by HPTSs, not the specific focus of current mammalian reproductive toxicology systems. An international consortium, “PlaNet”, will bridge academia, industry...

  14. Ground Monitoring Neotropical Dry Forests: A Sensor Network for Forest and Microclimate Dynamics in Semi-Arid Environments (Enviro-Net°)

    Science.gov (United States)

    Rankine, C. J.; Sánchez-Azofeifa, G.

    2011-12-01

    In the face of unprecedented global change driven by anthropogenic pressure on natural systems it has become imperative to monitor and better understand potential shifts in ecosystem functioning and services from local to global scales. The utilization of automated sensors technologies offers numerous advantages over traditional on-site ecosystem surveying techniques and, as a result, sensor networks are becoming a powerful tool in environmental monitoring programs. Tropical forests, renowned for their biodiversity, are important regulators of land-atmosphere fluxes yet the seasonally dry tropical forests, which account for 40% of forested ecosystems in the American tropics, have been severely degraded over the past several decades and not much is known of their capacity to recover. With less than 1% of these forests protected, our ability to monitor the dynamics and quantify changes in the remaining primary and recovering secondary tropical dry forests is vital to understanding mechanisms of ecosystem stress responses and climate feedback with respect to annual productivity and desertification processes in the tropics. The remote sensing component of the Tropi-Dry: Human and Biophysical Dimensions of Tropical Dry Forests in the Americas research network supports a network of long-term tropical ecosystem monitoring platforms which focus on the dynamics of seasonally dry tropical forests in the Americas. With over 25 sensor station deployments operating across a latitudinal gradient in Mexico, Costa Rica, Brazil, and Argentina continuously collecting hyper-temporal sensory input based on standardized deployment parameters, this monitoring system is unique among tropical environments. Technologies used in the network include optical canopy phenology towers, understory wireless sensing networks, above and below ground microclimate stations, and digital cameras. Sensory data streams are uploaded to a cyber-infrastructure initiative, denominated Enviro-Net°, for data

  15. NetNorM: Capturing cancer-relevant information in somatic exome mutation data with gene networks for cancer stratification and prognosis.

    Science.gov (United States)

    Le Morvan, Marine; Zinovyev, Andrei; Vert, Jean-Philippe

    2017-06-01

    Genome-wide somatic mutation profiles of tumours can now be assessed efficiently and promise to move precision medicine forward. Statistical analysis of mutation profiles is however challenging due to the low frequency of most mutations, the varying mutation rates across tumours, and the presence of a majority of passenger events that hide the contribution of driver events. Here we propose a method, NetNorM, to represent whole-exome somatic mutation data in a form that enhances cancer-relevant information using a gene network as background knowledge. We evaluate its relevance for two tasks: survival prediction and unsupervised patient stratification. Using data from 8 cancer types from The Cancer Genome Atlas (TCGA), we show that it improves over the raw binary mutation data and network diffusion for these two tasks. In doing so, we also provide a thorough assessment of somatic mutations prognostic power which has been overlooked by previous studies because of the sparse and binary nature of mutations.

  16. NetNorM: Capturing cancer-relevant information in somatic exome mutation data with gene networks for cancer stratification and prognosis.

    Directory of Open Access Journals (Sweden)

    Marine Le Morvan

    2017-06-01

    Full Text Available Genome-wide somatic mutation profiles of tumours can now be assessed efficiently and promise to move precision medicine forward. Statistical analysis of mutation profiles is however challenging due to the low frequency of most mutations, the varying mutation rates across tumours, and the presence of a majority of passenger events that hide the contribution of driver events. Here we propose a method, NetNorM, to represent whole-exome somatic mutation data in a form that enhances cancer-relevant information using a gene network as background knowledge. We evaluate its relevance for two tasks: survival prediction and unsupervised patient stratification. Using data from 8 cancer types from The Cancer Genome Atlas (TCGA, we show that it improves over the raw binary mutation data and network diffusion for these two tasks. In doing so, we also provide a thorough assessment of somatic mutations prognostic power which has been overlooked by previous studies because of the sparse and binary nature of mutations.

  17. NetNorM: Capturing cancer-relevant information in somatic exome mutation data with gene networks for cancer stratification and prognosis

    Science.gov (United States)

    2017-01-01

    Genome-wide somatic mutation profiles of tumours can now be assessed efficiently and promise to move precision medicine forward. Statistical analysis of mutation profiles is however challenging due to the low frequency of most mutations, the varying mutation rates across tumours, and the presence of a majority of passenger events that hide the contribution of driver events. Here we propose a method, NetNorM, to represent whole-exome somatic mutation data in a form that enhances cancer-relevant information using a gene network as background knowledge. We evaluate its relevance for two tasks: survival prediction and unsupervised patient stratification. Using data from 8 cancer types from The Cancer Genome Atlas (TCGA), we show that it improves over the raw binary mutation data and network diffusion for these two tasks. In doing so, we also provide a thorough assessment of somatic mutations prognostic power which has been overlooked by previous studies because of the sparse and binary nature of mutations. PMID:28650955

  18. RadNet Air Quality (Fixed Station) Data

    Data.gov (United States)

    U.S. Environmental Protection Agency — RadNet is a national network of monitoring stations that regularly collect air for analysis of radioactivity. The RadNet network, which has stations in each State,...

  19. Art/Net/Work

    DEFF Research Database (Denmark)

    Andersen, Christian Ulrik; Lindstrøm, Hanne

    2006-01-01

    The seminar Art|Net|Work deals with two important changes in our culture. On one side, the network has become essential in the latest technological development. The Internet has entered a new phase, Web 2.0, including the occurrence of as ‘Wiki’s’, ‘Peer-2-Peer’ distribution, user controlled...... the praxis of the artist. We see different kinds of interventions and activism (including ‘hacktivism’) using the network as a way of questioning the invisible rules that govern public and semi-public spaces. Who ‘owns’ them? What kind of social relationships do they generate? On what principle...

  20. FPGA shore station demonstrator for KM3NeT

    Energy Technology Data Exchange (ETDEWEB)

    Anassontzis, E.G. [Physics Department, University of Athens (Greece); Belias, A.; Koutsoukos, S.; Koutsoumpos, V. [NESTOR Institute for Astroparticle Physics, National Observatory of Athens, 24001 Pylos (Greece); Manolopoulos, K., E-mail: kmanolo@phys.uoa.gr [NESTOR Institute for Astroparticle Physics, National Observatory of Athens, 24001 Pylos (Greece); Resvanis, L.K. [Physics Department, University of Athens (Greece); NESTOR Institute for Astroparticle Physics, National Observatory of Athens, 24001 Pylos (Greece)

    2013-10-11

    The KM3NeT readout concept is based on a point-to-point optical network connecting the 10,000 optical modules in the deep-sea neutrino telescope with the shore station. The numerous fiber optic channels arriving at the shore station will be concentrated on the shore electronics systems, which will receive, merge and time order the data, and send them to the DAQ system. Although the network functionality is bi-directional, the physical channel allocation is asymmetric; most channels are assigned to the data reception and only a few channels are used for control with data transport from shore to the telescope. We will discuss the FPGA based platform systems for the shore station and the appropriate firmware implementation for the data gathering and broadcast demands of a neutrino telescope. We will present our experiences based on FPGA evaluation platforms suitable to build a demonstrator of the KM3NeT shore station.

  1. Laser engineered net shaping of quasi-continuous network microstructural TiB reinforced titanium matrix bulk composites: Microstructure and wear performance

    Science.gov (United States)

    Hu, Yingbin; Ning, Fuda; Wang, Hui; Cong, Weilong; Zhao, Bo

    2018-02-01

    Titanium (Ti) and its alloys have been successfully applied to the aeronautical and biomedical industries. However, their poor tribological properties restrict their fields of applications under severe wear conditions. Facing to these challenges, this study investigated TiB reinforced Ti matrix composites (TiB-TMCs), fabricated by in-situ laser engineered net shaping (LENS) process, through analyzing parts quality, microstructure formation mechanisms, microstructure characterizations, and workpiece wear performance. At high B content areas (original B particle locations), reaction between Ti and B particles took place, generating flower-like microstructure. At low B content areas, eutectic TiB nanofibers contacted with each other with the formation of crosslinking microstructure. The crosslinking microstructural TiB aggregated and connected at the boundaries of Ti grains, forming a three-dimensional quasi-continuous network microstructure. The results show that compared with commercially pure Ti bulk parts, the TiB-TMCs exhibited superior wear performance (i.e. indentation wear resistance and friction wear resistance) due to the present of TiB reinforcement and the innovative microstructures formed inside TiB-TMCs. In addition, the qualities of the fabricated parts were improved with fewer interior defects by optimizing laser power, thus rendering better wear performance.

  2. Implementing NetScaler VPX

    CERN Document Server

    Sandbu, Marius

    2014-01-01

    An easy-to-follow guide with detailed step-by step-instructions on how to implement the different key components in NetScaler, with real-world examples and sample scenarios.If you are a Citrix or network administrator who needs to implement NetScaler in your virtual environment to gain an insight on its functionality, this book is ideal for you. A basic understanding of networking and familiarity with some of the different Citrix products such as XenApp or XenDesktop is a prerequisite.

  3. Semantic Networks and Neural Nets.

    Science.gov (United States)

    1984-06-01

    TRAGEDIES . If John likes SCIENCE-FICTION more than SHAKESPEAREAN - TRAGEDIES then it is easy to see how SCIENCE-FICTION will be chosen as the answer...manner it is easy to see how in subsequent steps the fod may converge to [LITERARY-KIND ’AI with the choices being SCIENCE-FICTION and SHAKESPEAREAN

  4. Source Localization in Networks: Trees and Beyond

    OpenAIRE

    Zhu, Kai; Ying, Lei

    2015-01-01

    Information diffusion in networks can be used to model many real-world phenomena, including rumor spreading on online social networks, epidemics in human beings, and malware on the Internet. Informally speaking, the source localization problem is to identify a node in the network that provides the best explanation of the observed diffusion. Despite significant efforts and successes over last few years, theoretical guarantees of source localization algorithms were established only for tree net...

  5. RadNet Air Data From Little Rock, AR

    Science.gov (United States)

    This page presents radiation air monitoring and air filter analysis data for Little Rock, AR from EPA's RadNet system. RadNet is a nationwide network of monitoring stations that measure radiation in air, drinking water and precipitation.

  6. RadNet Air Data From Pittsburgh, PA

    Science.gov (United States)

    This page presents radiation air monitoring and air filter analysis data for Pittsburgh, PA from EPA's RadNet system. RadNet is a nationwide network of monitoring stations that measure radiation in air, drinking water and precipitation.

  7. RadNet Air Data From Montgomery, AL

    Science.gov (United States)

    This page presents radiation air monitoring and air filter analysis data for Montgomery, AL from EPA's RadNet system. RadNet is a nationwide network of monitoring stations that measure radiation in air, drinking water and precipitation.

  8. RadNet Air Data From Toledo, OH

    Science.gov (United States)

    This page presents radiation air monitoring and air filter analysis data for Toledo, OH from EPA's RadNet system. RadNet is a nationwide network of monitoring stations that measure radiation in air, drinking water and precipitation.

  9. RadNet Air Data From Honolulu, HI

    Science.gov (United States)

    This page presents radiation air monitoring and air filter analysis data for Honolulu, HI from EPA's RadNet system. RadNet is a nationwide network of monitoring stations that measure radiation in air, drinking water and precipitation.

  10. Are You Neutral About Net Neutrality

    Science.gov (United States)

    2007-06-20

    Information Resources Management College National Defense University Are You Neutral About Net Neutrality ? A presentation for Systems & Software...author uses Verizon FiOS for phone, TV, and internet service 3 Agenda Net Neutrality —Through 2 Lenses Who Are the Players & What Are They Saying...Medical Treatment Mini-Case Studies Updates Closing Thoughts 4 Working Definitions of Net Neutrality "Network Neutrality" is the concept that

  11. Neural network-based estimates of Southern Ocean net community production from in situ O2 / Ar and satellite observation: a methodological study

    Science.gov (United States)

    Chang, C.-H.; Johnson, N. C.; Cassar, N.

    2014-06-01

    Southern Ocean organic carbon export plays an important role in the global carbon cycle, yet its basin-scale climatology and variability are uncertain due to limited coverage of in situ observations. In this study, a neural network approach based on the self-organizing map (SOM) is adopted to construct weekly gridded (1° × 1°) maps of organic carbon export for the Southern Ocean from 1998 to 2009. The SOM is trained with in situ measurements of O2 / Ar-derived net community production (NCP) that are tightly linked to the carbon export in the mixed layer on timescales of one to two weeks and with six potential NCP predictors: photosynthetically available radiation (PAR), particulate organic carbon (POC), chlorophyll (Chl), sea surface temperature (SST), sea surface height (SSH), and mixed layer depth (MLD). This nonparametric approach is based entirely on the observed statistical relationships between NCP and the predictors and, therefore, is strongly constrained by observations. A thorough cross-validation yields three retained NCP predictors, Chl, PAR, and MLD. Our constructed NCP is further validated by good agreement with previously published, independent in situ derived NCP of weekly or longer temporal resolution through real-time and climatological comparisons at various sampling sites. The resulting November-March NCP climatology reveals a pronounced zonal band of high NCP roughly following the Subtropical Front in the Atlantic, Indian, and western Pacific sectors, and turns southeastward shortly after the dateline. Other regions of elevated NCP include the upwelling zones off Chile and Namibia, the Patagonian Shelf, the Antarctic coast, and areas surrounding the Islands of Kerguelen, South Georgia, and Crozet. This basin-scale NCP climatology closely resembles that of the satellite POC field and observed air-sea CO2 flux. The long-term mean area-integrated NCP south of 50° S from our dataset, 17.9 mmol C m-2 d-1, falls within the range of 8.3 to 24 mmol

  12. Neural network-based estimates of Southern Ocean net community production from in-situ O2 / Ar and satellite observation: a methodological study

    Science.gov (United States)

    Chang, C.-H.; Johnson, N. C.; Cassar, N.

    2013-10-01

    Southern Ocean organic carbon export plays an important role in the global carbon cycle, yet its basin-scale climatology and variability are uncertain due to limited coverage of in situ observations. In this study, a neural network approach based on the self-organizing map (SOM) is adopted to construct weekly gridded (1° × 1°) maps of organic carbon export for the Southern Ocean from 1998 to 2009. The SOM is trained with in situ measurements of O2 / Ar-derived net community production (NCP) that are tightly linked to the carbon export in the mixed layer on timescales of 1-2 weeks, and six potential NCP predictors: photosynthetically available radiation (PAR), particulate organic carbon (POC), chlorophyll (Chl), sea surface temperature (SST), sea surface height (SSH), and mixed layer depth (MLD). This non-parametric approach is based entirely on the observed statistical relationships between NCP and the predictors, and therefore is strongly constrained by observations. A thorough cross-validation yields three retained NCP predictors, Chl, PAR, and MLD. Our constructed NCP is further validated by good agreement with previously published independent in situ derived NCP of weekly or longer temporal resolution through real-time and climatological comparisons at various sampling sites. The resulting November-March NCP climatology reveals a pronounced zonal band of high NCP roughly following the subtropical front in the Atlantic, Indian and western Pacific sectors, and turns southeastward shortly after the dateline. Other regions of elevated NCP include the upwelling zones off Chile and Namibia, Patagonian Shelf, Antarctic coast, and areas surrounding the Islands of Kerguelen, South Georgia, and Crozet. This basin-scale NCP climatology closely resembles that of the satellite POC field and observed air-sea CO2 flux. The long-term mean area-integrated NCP south of 50° S from our dataset, 14 mmol C m-2 d-1, falls within the range of 8.3-24 mmol C m-2 d-1 from other model

  13. The Net Neutrality Debate: The Basics

    Science.gov (United States)

    Greenfield, Rich

    2006-01-01

    Rich Greenfield examines the basics of today's net neutrality debate that is likely to be an ongoing issue for society. Greenfield states the problems inherent in the definition of "net neutrality" used by Common Cause: "Network neutrality is the principle that Internet users should be able to access any web content they choose and…

  14. FY 1998 annual summary report on International Clean Energy Network Using Hydrogen Conversion (WE-NET) system technology. Subtask 2. Examination and promotion of measures to obtain international understanding and cooperation; 1998 nendo seika hokokusho. Suiso riyo kokusai clean energy system gijutsu (WE-NET) subtask 2 (kokusai kyoryoku shuishin no tame no chosa kento)

    Energy Technology Data Exchange (ETDEWEB)

    NONE

    1999-03-01

    Described herein are the results of examination and promotion of measures to obtain international understanding and cooperation, and examination and development of measures to promote international exchange of technical information, conducted in the FY 1998 continuously from the previous year, with the object to realize the International Clean Energy Network Using Hydrogen Conversion (WE-NET) project. In the FY 1998, the English version of the 1997 annual summary report was distributed to a total of about 150 overseas organizations. The WE-NET project activities were presented to the 12th World Hydrogen Energy Conference, International Joint Power Generation Conference held in 1998 by American Society of Mechanical Engineers, and 2nd International Symposium on Advanced Energy Conversion Systems and Related Technologies. For the examination and development of measures to promote international exchange of technical information, the contracting party of Japan for the Hydrogen Implementation Agreement with IEA has been shifted from the government of Japan to NEDO. NEDO has been representing Japan for various workshops on the tasks. The hydrogen projects conducted by Germany and USA were also surveyed. The WE-NET project homepage was opened in June, 1998. (NEDO)

  15. Neural-net based real-time economic dispatch for thermal power plants

    Energy Technology Data Exchange (ETDEWEB)

    Djukanovic, M.; Milosevic, B. [Inst. Nikola Tesla, Belgrade (Yugoslavia). Dept. of Power Systems; Calovic, M. [Univ. of Belgrade (Yugoslavia). Dept. of Electrical Engineering; Sobajic, D.J. [Electric Power Research Inst., Palo Alto, CA (United States)

    1996-12-01

    This paper proposes the application of artificial neural networks to real-time optimal generation dispatch of thermal units. The approach can take into account the operational requirements and network losses. The proposed economic dispatch uses an artificial neural network (ANN) for generation of penalty factors, depending on the input generator powers and identified system load change. Then, a few additional iterations are performed within an iterative computation procedure for the solution of coordination equations, by using reference-bus penalty-factors derived from the Newton-Raphson load flow. A coordination technique for environmental and economic dispatch of pure thermal systems, based on the neural-net theory for simplified solution algorithms and improved man-machine interface is introduced. Numerical results on two test examples show that the proposed algorithm can efficiently and accurately develop optimal and feasible generator output trajectories, by applying neural-net forecasts of system load patterns.

  16. Evaluation of DementiaNet, a network-based primary care innovation for community-dwelling patients with dementia: protocol for a longitudinal mixed methods multiple case study

    NARCIS (Netherlands)

    Richters, A.; Nieuwboer, M.S.; Perry, M.; Olde Rikkert, M.G.M.; Melis, R.J.F.; Marck, M.A. van der

    2017-01-01

    INTRODUCTION: Primary healthcare professionals will increasingly be required to manage and optimise their treatment for patients with dementia. With DementiaNet, we aim to reduce the burden of dementia on healthcare services and society through implementation and facilitation of integrated

  17. The Tragedy of the Few

    DEFF Research Database (Denmark)

    Scavenius, Theresa

    2016-01-01

    that the tragedy of the commons as a story of climate change is inadequate. The second is positive: to suggest a more satisfactory framework, which I call thetragedy of the few. In this view, climate politics is neither primarily mitigation nor economic incentive politics, but one of distributing rights to access...... of the tragedy of the commons and demonstrate its inadequacy. I then provide an account of the rights-based view of climate change that consists of two arguments. First, I demonstrate the normative side of the argument by highlighting the importance of environmental rights, and second, I outline the empirical...

  18. Few-photon optical diode

    OpenAIRE

    Roy, Dibyendu

    2010-01-01

    We propose a novel scheme of realizing an optical diode at the few-photon level. The system consists of a one-dimensional waveguide coupled asymmetrically to a two-level system. The two or multi-photon transport in this system is strongly correlated. We derive exactly the single and two-photon current and show that the two-photon current is asymmetric for the asymmetric coupling. Thus the system serves as an optical diode which allows transmission of photons in one direction much more efficie...

  19. NA-NET numerical analysis net

    Energy Technology Data Exchange (ETDEWEB)

    Dongarra, J. [Tennessee Univ., Knoxville, TN (United States). Dept. of Computer Science]|[Oak Ridge National Lab., TN (United States); Rosener, B. [Tennessee Univ., Knoxville, TN (United States). Dept. of Computer Science

    1991-12-01

    This report describes a facility called NA-NET created to allow numerical analysts (na) an easy method of communicating with one another. The main advantage of the NA-NET is uniformity of addressing. All mail is addressed to the Internet host ``na-net.ornl.gov`` at Oak Ridge National Laboratory. Hence, members of the NA-NET do not need to remember complicated addresses or even where a member is currently located. As long as moving members change their e-mail address in the NA-NET everything works smoothly. The NA-NET system is currently located at Oak Ridge National Laboratory. It is running on the same machine that serves netlib. Netlib is a separate facility that distributes mathematical software via electronic mail. For more information on netlib consult, or send the one-line message ``send index`` to netlib{at}ornl.gov. The following report describes the current NA-NET system from both a user`s perspective and from an implementation perspective. Currently, there are over 2100 members in the NA-NET. An average of 110 mail messages pass through this facility daily.

  20. NA-NET numerical analysis net

    Energy Technology Data Exchange (ETDEWEB)

    Dongarra, J. (Tennessee Univ., Knoxville, TN (United States). Dept. of Computer Science Oak Ridge National Lab., TN (United States)); Rosener, B. (Tennessee Univ., Knoxville, TN (United States). Dept. of Computer Science)

    1991-12-01

    This report describes a facility called NA-NET created to allow numerical analysts (na) an easy method of communicating with one another. The main advantage of the NA-NET is uniformity of addressing. All mail is addressed to the Internet host na-net.ornl.gov'' at Oak Ridge National Laboratory. Hence, members of the NA-NET do not need to remember complicated addresses or even where a member is currently located. As long as moving members change their e-mail address in the NA-NET everything works smoothly. The NA-NET system is currently located at Oak Ridge National Laboratory. It is running on the same machine that serves netlib. Netlib is a separate facility that distributes mathematical software via electronic mail. For more information on netlib consult, or send the one-line message send index'' to netlib{at}ornl.gov. The following report describes the current NA-NET system from both a user's perspective and from an implementation perspective. Currently, there are over 2100 members in the NA-NET. An average of 110 mail messages pass through this facility daily.

  1. Generation of high-resolution wind fields from the dense meteorological station network WegenerNet in South-Eastern Austria

    Science.gov (United States)

    Schlager, Christoph; Kirchengast, Gottfried; Fuchsberger, Jürgen

    2016-04-01

    To investigate weather and climate on a local scale as well as for evaluating regional climate models (RCMs) the Wegener Center at the University of Graz established the long-term field experiment WegenerNet Feldbach region, a dense grid of 153 meteorological stations. The observations of these stations are managed by an automatic WegenerNet Processing system. This system includes a quality check of collected observations and a Data Product Generator (DPG), among other subsystems. Products already implemented in the DPG are gridded weather and climate products, generated from the main parameters temperature, precipitation and relative humidity (Kirchengast et. al., Bull. Amer. Meteor. Soc., 95, 227-242, 2014). Missing elements are gridded wind fields from wind observations. Wind is considered as one of the most difficult meteorological variables to model and depends on many different parameters such as topography and surface roughness. Therefore a simple interpolation can only be performed in case of uniform characteristics of landscape. The presentation introduces our method of generation of wind fields from near real-time observations of the WegenerNet. Purpose of this work is to provide a database with 3D wind fields in a high spatial and time resolution as addition to the existing products, for evaluating convection permitting climate models as well as investigating weather and climate on a local scale. Core of the application is the diagnostic California Meteorological Model (CALMET). This model computes 3D wind fields based on meteorological observational data, a digital elevation model and land use categories. The application generates the required input files from meteorological stations of the WegenerNet Feldbach region and triggers the start of the CALMET model with these input files. In a next step the modeled wind fields are stored automatically every 30 minutes with a spatial resolution of 100 x 100 m in the WegenerNet database. To verify the

  2. Few body physics with CLAS

    Energy Technology Data Exchange (ETDEWEB)

    G.P. Gilfoyle for the CLAS Collaboration

    2011-02-01

    The study of few-body, nuclear systems with electromagnetic probes is an essential piece of the scientific program at Jefferson Lab. Reactions using real photons and electrons (up to energies of 6 GeV) are measured using the CEBAF large acceptance spectrometer (CLAS) detector in Hall B, a nearly 4π magnetic spectrometer. We focus here on three areas. (1) Short-range correlations (SRCs) probe the high-momentum components of the nuclear wave function. Recent CLAS experiments map out their isospin character and reveal the importance of the tensor part of the nuclear force. (2) Three-body forces are an essential feature of nuclei. We will show results using real photons and 3He and 4He targets that remain largely unexplained. (3) Evidence for the transition to a quark-gluon description of nuclei has been observed with photon beams in CLAS on deuterium and 3-He targets. Alternative explanations reveal the geography of the transition is complex.

  3. Net Ecosystem Carbon Flux

    Data.gov (United States)

    U.S. Geological Survey, Department of the Interior — Net Ecosystem Carbon Flux is defined as the year-over-year change in Total Ecosystem Carbon Stock, or the net rate of carbon exchange between an ecosystem and the...

  4. FY 1998 annual summary report on International Clean Energy Network Using Hydrogen Conversion (WE-NET) system technology. Subtask 9. Research and evaluation of innovative and leading technologies; 1998 nendo seika hokokusho. Suiso riyo kokusai clean energy system gijutsu (WE-NET) subtask 9 (kakushinteki, sendoteki gijutsu ni kansuru chosa kenkyu)

    Energy Technology Data Exchange (ETDEWEB)

    NONE

    1999-03-01

    In order to make useful suggestions and proposals for the International Clean Energy Network Using Hydrogen Conversion (WE-NET) project and thereby to promote the research and development activities, the innovative and leading technologies have been studied, investigated and evaluated. In FY 1998, a total of 6 proposals were collected, and evaluated to prioritize for the conceptual studies. These are related to methanol-fueled power generation turbine system, conceptual design of high-efficiency production system for high-efficiency solar cell by the 10 GW/y scale production process, investigation of potential of wind power, CO2 recycling methanol fuel cell, investigation of catalysis materials for hydrogen combustion and catalytic combustion systems, development of reversible high-temperature steam electrolysis cell/solid oxide fuel cell by the synthesis from aqueous solutions, and mobile heat recovery hydrogen production system. Promising technologies to be reflected on the WE-NET project were examined, based on the new technologies acquired from the research and investigation so far. As a result, two candidates were selected; hydrogen liquefaction by magnetic refrigeration technology, and catalytic combustion gas turbine. (NEDO)

  5. Professional Enterprise NET

    CERN Document Server

    Arking, Jon

    2010-01-01

    Comprehensive coverage to help experienced .NET developers create flexible, extensible enterprise application code If you're an experienced Microsoft .NET developer, you'll find in this book a road map to the latest enterprise development methodologies. It covers the tools you will use in addition to Visual Studio, including Spring.NET and nUnit, and applies to development with ASP.NET, C#, VB, Office (VBA), and database. You will find comprehensive coverage of the tools and practices that professional .NET developers need to master in order to build enterprise more flexible, testable, and ext

  6. A Lightweight TwiddleNet Portal

    Science.gov (United States)

    2008-03-01

    designed to exploit the multiple networking modalities available in the current generation of smartphones . TwiddleNet enables well-organized and well...of Sonopia and will have a comprehensive review of the service in the coming weeks [12]. Twango, which was acquired by Nokia in July 2007, is an...EXPERIMENTATION As already mentioned the main purpose of this thesis is the development of a TwiddleNet portal running on a smartphone or a PDA, which can allow

  7. The net neutrality debate on Twitter

    Directory of Open Access Journals (Sweden)

    Wolf J. Schünemann

    2015-12-01

    Full Text Available The internet has been seen as a medium that empowers individual political actors in relation to established political elites and media gatekeepers. The present article discusses this “net empowerment hypothesis” and tests it empirically by analysing Twitter communication on the regulation of net neutrality. We extracted 503.839 tweets containing #NetNeutrality posted between January and March 2015 and analysed central developments and the network structure of the debate. The empirical results show that traditional actors from media and politics still maintain a central role.

  8. BioNet Digital Communications Framework

    Science.gov (United States)

    Gifford, Kevin; Kuzminsky, Sebastian; Williams, Shea

    2010-01-01

    BioNet v2 is a peer-to-peer middleware that enables digital communication devices to talk to each other. It provides a software development framework, standardized application, network-transparent device integration services, a flexible messaging model, and network communications for distributed applications. BioNet is an implementation of the Constellation Program Command, Control, Communications and Information (C3I) Interoperability specification, given in CxP 70022-01. The system architecture provides the necessary infrastructure for the integration of heterogeneous wired and wireless sensing and control devices into a unified data system with a standardized application interface, providing plug-and-play operation for hardware and software systems. BioNet v2 features a naming schema for mobility and coarse-grained localization information, data normalization within a network-transparent device driver framework, enabling of network communications to non-IP devices, and fine-grained application control of data subscription band width usage. BioNet directly integrates Disruption Tolerant Networking (DTN) as a communications technology, enabling networked communications with assets that are only intermittently connected including orbiting relay satellites and planetary rover vehicles.

  9. Towards a New Generation of Passive Optical Net-works Hacia una Nueva Generación de Redes Ópticas Pasivas

    Directory of Open Access Journals (Sweden)

    Elkin Fabián Aguas Martinez

    2016-01-01

    Conclusions: The behavior of the variables analyzed in the results shows that when dimensioning a channel wavelength, which is required to determine the amount of resources needed to meet the bandwidth demand of the users, the proposed model positively influences the network behavior.

  10. Tracking and Treating Mobile Populations. The TB Net System. Migrant Clinicians Network Monograph Series. = El Sistema de Red para la TB.

    Science.gov (United States)

    Migrant Clinicians Network, Inc., Austin, TX.

    A comprehensive tracking and referral network that helps provide continuity of care for mobile populations with active tuberculosis (TB) or TB infection is considered essential for effective treatment of TB. However, the interstate referral system that exists between state health departments has been highly inefficient for serving migrant…

  11. MetNetMaker: a free and open-source tool for the creation of novel metabolic networks in SBML format.

    Science.gov (United States)

    Forth, Thomas; McConkey, Glenn A; Westhead, David R

    2010-09-15

    An application has been developed to help with the creation and editing of Systems Biology Markup Language (SBML) format metabolic networks up to the organism scale. Networks are defined as a collection of Kyoto Encyclopedia of Genes and Genomes (KEGG) LIGAND reactions with an optional associated Enzyme Classification (EC) number for each reaction. Additional custom reactions can be defined by the user. Reactions within the network can be assigned flux constraints and compartmentalization is supported for each reaction in addition to the support for reactions that occur across compartment boundaries. Exported networks are fully SBML L2V4 compatible with an optional L2V1 export for compatibility with old versions of the COBRA toolbox. The software runs in the free Microsoft Access 2007 Runtime (Microsoft Inc.), which is included with the installer and works on Windows XP SP2 or better. Full source code is viewable in the full version of Access 2007 or 2010. Users must have a license to use the KEGG LIGAND database (free academic licensing is available). Please go to www.bioinformatics.leeds.ac.uk/~pytf/metnetmaker for software download, help and tutorials.

  12. WaveNet

    Science.gov (United States)

    2015-10-30

    Coastal Inlets Research Program WaveNet WaveNet is a web-based, Graphical-User-Interface ( GUI ) data management tool developed for Corps coastal...generates tabular and graphical information for project planning and design documents. The WaveNet is a web-based GUI designed to provide users with a...data from different sources, and employs a combination of Fortran, Python and Matlab codes to process and analyze data for USACE applications

  13. Coloured Petri Nets

    DEFF Research Database (Denmark)

    Jensen, Kurt

    1991-01-01

    This paper describes how Coloured Petri Nets (CP-nets) have been developed — from being a promising theoretical model to being a full-fledged language for the design, specification, simulation, validation and implementation of large software systems (and other systems in which human beings and...... use of CP-nets — because it means that the function representation and the translations (which are a bit mathematically complex) no longer are parts of the basic definition of CP-nets. Instead they are parts of the invariant method (which anyway demands considerable mathematical skills...

  14. Game Coloured Petri Nets

    DEFF Research Database (Denmark)

    Westergaard, Michael

    2006-01-01

    This paper introduces the notion of game coloured Petri nets. This allows the modeler to explicitly model what parts of the model comprise the modeled system and what parts are the environment of the modeled system. We give the formal definition of game coloured Petri nets, a means of reachability...... analysis of this net class, and an application of game coloured Petri nets to automatically generate easy-to-understand visualizations of the model by exploiting the knowledge that some parts of the model are not interesting from a visualization perspective (i.e. they are part of the environment...

  15. Programming NET Web Services

    CERN Document Server

    Ferrara, Alex

    2007-01-01

    Web services are poised to become a key technology for a wide range of Internet-enabled applications, spanning everything from straight B2B systems to mobile devices and proprietary in-house software. While there are several tools and platforms that can be used for building web services, developers are finding a powerful tool in Microsoft's .NET Framework and Visual Studio .NET. Designed from scratch to support the development of web services, the .NET Framework simplifies the process--programmers find that tasks that took an hour using the SOAP Toolkit take just minutes. Programming .NET

  16. Annotating Coloured Petri Nets

    DEFF Research Database (Denmark)

    Lindstrøm, Bo; Wells, Lisa Marie

    2002-01-01

    -net. An example of such auxiliary information is a counter which is associated with a token to be able to do performance analysis. Modifying colour sets and arc inscriptions in a CP-net to support a specific use may lead to creation of several slightly different CP-nets – only to support the different uses...... a method which makes it possible to associate auxiliary information, called annotations, with tokens without modifying the colour sets of the CP-net. Annotations are pieces of information that are not essential for determining the behaviour of the system being modelled, but are rather added to support...

  17. Examining the value of global seasonal reference evapotranspiration forecasts to support FEWS NET’s food insecurity outlooks

    Science.gov (United States)

    Shukla, Shraddhanand; McEvoy, Daniel; Hobbins, Michael; Husak, Gregory; Huntington, Justin; Funk, Chris; Macharia, Denis; Verdin, James P.

    2017-01-01

    The Famine Early Warning Systems Network (FEWS NET) team provides food insecurity outlooks for several developing countries in Africa, Central Asia, and Central America. This study describes development of a new global reference evapotranspiration (ETo) seasonal reforecast and skill evaluation with a particular emphasis on the potential use of this dataset by the FEWS NET to support food insecurity early warning. The ETo reforecasts span the 1982-2009 period and are calculated following ASCE’s formulation of Penman-Monteith method driven by seasonal climate forecasts of monthly mean temperature, humidity, wind speed, and solar radiation from NCEP’s CFSv2 and NASA’s GEOS-5 models. The skill evaluation using deterministic and probabilistic scores, focuses on the December-February (DJF), March-May (MAM), June-August (JJA) and September-November (SON) seasons. The results indicate that ETo forecasts are a promising tool for early warning of drought and food insecurity. Globally, the regions where forecasts are most skillful (correlation >0.35 at lead-2) include Western U.S., northern parts of South America, parts of Sahel region and Southern Africa. The FEWS NET regions where forecasts are most skillful (correlation >0.35 at lead-3) include Northern Sub-Saharan Africa (DJF, dry season), Central America (DJF, dry season), parts of East Africa (JJA, wet Season), Southern Africa (JJA, dry season), and Central Asia (MAM, wet season). A case study over parts of East Africa for the JJA season shows that ETo forecasts in combination with the precipitation forecasts could have provided early warning of recent severe drought events (e.g., 2002, 2004, 2009) that contributed to substantial food insecurity in the region.

  18. An assessment of the microseismic activity and focal mechanisms of the Izmir (Smyrna) area from a new local network (IzmirNET)

    Science.gov (United States)

    Gok, Elcin; Polat, Orhan

    2014-11-01

    Izmir metropolitan area is one of the biggest cities of Turkey in terms of population and industrial density. Amount of recordings and quality of located events increased since the new local seismic array, IzmirNET, was installed in 2008. Present study addresses to elucidate seismotectonics of Izmir vicinity by a new data set and reveal first results of seismological analysis obtained for 4.5 years. 930 small earthquakes are well located within less than 1.0 km horizontal error (RMS ≤ 0.15 s) over a total of 1421 recorded events. Data were processed by using SEISAN Earthquake Analysis Software implemented at SeismoLab of Dokuz Eylul University. The Orhanli-Tuzla Fault Zone and Izmir faults are capable of producing a destructive earthquake. Events show clear clusters around the Outer Bay of Izmir Gulf and Sigacik Bay. We also detected some dense clusters Sigacik Bay to the South, and in the outer bay of Izmir Gulf along NW-SE direction. We investigated kinematics of active faults around the Izmir and Foca areas by using 41 focal mechanism solutions from different algorithms. Foca is located 60 km in the NW direction of Izmir. Mechanisms generally resulted in pure normal or dominant normal faulting with minor strike-slip components in agreement with the kinematics of the other fault zones in Western Turkey. A stress tensor study using selected fault plane solution indicates that the study area is under extension regime in an N-S direction with 71° plunge for maximum compressive principal stress axis (S1), and closer to horizontals for intermediate (S2) and minimum compressive principal stress axis (S3).

  19. StreamNet; Northwest Aquatic Resource Information Network - Status of Salmon and Steelhead in the Columbia River Basin, 1995 Final Report.

    Energy Technology Data Exchange (ETDEWEB)

    Anderson, Duane A.; Beamesderfer, Raymond C. [Oregon Dept. of Fish and Wildlife, Enterprise, OR (United States); Woodard, Bob [Washington Dept. of Fish and Wildlife, Olympia, WA (United States)

    1996-04-01

    Information on fish populations, fisheries, and fish habitat is crucial to the success of ongoing program to protect, recover, enhance, and manage fish resources in the Columbia River Basin. However, pertinent data are often difficult to locate because it is scattered among many agencies and is often unpublished. The goal of this annual report is to bring many diverse data types and sources into a single comprehensive report on the status of anadromous fish runs in the Columbia River Basin and the environmental conditions that may affect that status. Brief summaries are provided to identify the type and scope of available information. This synopsis is intended to complement other more detailed reports to which readers are referred for comprehensive treatment of specific subjects. This first report focuses mainly on anadromous salmon and steelhead (primarily through 1994) but the authors intend to expand the scope of future issues to include resident species. This is the first of what the authors intend to be an annual report. They welcome constructive suggestions for improvements. This report is a product of the StreamNet (formerly Coordinated Information System and Northwest Environmental Data Base) project which is a part of the Bonneville Power Administration`s program to protect, mitigate, and enhance fish and wildlife affected by the development and operation of hydroelectric facilities on the Columbia River and its tributaries. The project is called for in the Fish and Wildlife Program of the Northwest Power Planning Council. The project`s objective is to promote exchange and dissemination of information in a standardized electronic format throughout the basin. This project is administered by the Pacific States Marine Fisheries Commission with active participation by tribal, state, and federal fish and wildlife agencies.

  20. Net zero water

    CSIR Research Space (South Africa)

    Lindeque, M

    2013-01-01

    Full Text Available Is it possible to develop a building that uses a net zero amount of water? In recent years it has become evident that it is possible to have buildings that use a net zero amount of electricity. This is possible when the building is taken off...

  1. Kunstige neurale net

    DEFF Research Database (Denmark)

    Hørning, Annette

    1994-01-01

    Artiklen beskæftiger sig med muligheden for at anvende kunstige neurale net i forbindelse med datamatisk procession af naturligt sprog, specielt automatisk talegenkendelse.......Artiklen beskæftiger sig med muligheden for at anvende kunstige neurale net i forbindelse med datamatisk procession af naturligt sprog, specielt automatisk talegenkendelse....

  2. Gestión Ciudadana de la Tecnología: Una aproximación desde los Science and Technology Studies a las redes wifi y la governance urbana a través de guifi.net Citizen Management of Technology: A Science and Technology Studies approach to wireless networks and urban governance trough guifi.net

    Directory of Open Access Journals (Sweden)

    Yann Bona Beauvois

    2011-03-01

    Full Text Available

    Tesis doctoral a cargo de Yann Bona presentada en el Departamento de Psicología Social de la Univesriddad Autónoma de Barcelona (UAB en diciembre del 2010. Dirigida por el Dr. Joan Pujol Tarrés.

    La tesis trata de ahondar en las formas en las que iniciativas ciudadanas que tienen por objeto la gestión de la tecnología en el espacio urbano se relacionan con las administraciones públicas. Lo hace a partir de nociones y conceptos de los STS tales como cosmopolítica, composición híbrida o democracia técnica. En síntesis, podemos decir que la tesis responde a la pregunta formulada por Bruno Latour de ¿qué significa hacer pasar la política del lado lo de la técnica?. Nosotros ofrecemos una propuesta centrada en lo que denominamos una sociotécnica de las políticas públicas.

    La tesis se basa en un estudio de caso centrado una red sin hilos libre y abierta (ubicada principalmente en Cataluña y llamada guifi.net surgida del deseo e iniciativa de la sociedad civil y que, hasta la fecha, es la más grande del mundo.

    Thesis presented at the Departament de Psicologia Social de la UAB by Yann Bona on December, 2010. Directed by Dr. Joan Pujol Tarrés.

    This dissertation explores the many ways in which citizens aiming to manage technologies in urban scape relate to public administrations. To accomplish it's task, it brings forward certain STS notions such as cosmopolitics, hybrid composition or technical democracy. On a general level, this thesis seeks an answer to Bruno Latour concern with what does it mean to conceive the technical as political?. We offer a set of conclusions based on what we choose to name a Sociotechnique of Public Policy .

    Our work relies on a case study focused on a free and open wireless network (located in Catalunya for the most part and called guifi.net that emerged from the desire and will of Civil Society wich, up to date, turns out to be the world's biggest free

  3. OK-Net Arable online knowledge platform

    DEFF Research Database (Denmark)

    Rasmussen, Ilse Ankjær; Jensen, Allan Leck; Jørgensen, Margit Styrbæk

    2017-01-01

    The complexity of organic farming requires farmers to have a very high level of knowledge and skills, but exchange on organic farming techniques remains limited. In order to increase productivity and quality in organic arable cropping in Europe, the thematic network OK-Net Arable under Horizon 20...

  4. Pro NET Best Practices

    CERN Document Server

    Ritchie, Stephen D

    2011-01-01

    Pro .NET Best Practices is a practical reference to the best practices that you can apply to your .NET projects today. You will learn standards, techniques, and conventions that are sharply focused, realistic and helpful for achieving results, steering clear of unproven, idealistic, and impractical recommendations. Pro .NET Best Practices covers a broad range of practices and principles that development experts agree are the right ways to develop software, which includes continuous integration, automated testing, automated deployment, and code analysis. Whether the solution is from a free and

  5. Getting to Net Zero

    Energy Technology Data Exchange (ETDEWEB)

    2016-09-01

    The technology necessary to build net zero energy buildings (NZEBs) is ready and available today, however, building to net zero energy performance levels can be challenging. Energy efficiency measures, onsite energy generation resources, load matching and grid interaction, climatic factors, and local policies vary from location to location and require unique methods of constructing NZEBs. It is recommended that Components start looking into how to construct and operate NZEBs now as there is a learning curve to net zero construction and FY 2020 is just around the corner.

  6. Instant Lucene.NET

    CERN Document Server

    Heydt, Michael

    2013-01-01

    Filled with practical, step-by-step instructions and clear explanations for the most important and useful tasks. A step-by-step guide that helps you to index, search, and retrieve unstructured data with the help of Lucene.NET.Instant Lucene.NET How-to is essential for developers new to Lucene and Lucene.NET who are looking to get an immediate foundational understanding of how to use the library in their application. It's assumed you have programming experience in C# already, but not that you have experience with search techniques such as information retrieval theory (although there will be a l

  7. Approximation methods for stochastic petri nets

    Science.gov (United States)

    Jungnitz, Hauke Joerg

    1992-01-01

    Stochastic Marked Graphs are a concurrent decision free formalism provided with a powerful synchronization mechanism generalizing conventional Fork Join Queueing Networks. In some particular cases the analysis of the throughput can be done analytically. Otherwise the analysis suffers from the classical state explosion problem. Embedded in the divide and conquer paradigm, approximation techniques are introduced for the analysis of stochastic marked graphs and Macroplace/Macrotransition-nets (MPMT-nets), a new subclass introduced herein. MPMT-nets are a subclass of Petri nets that allow limited choice, concurrency and sharing of resources. The modeling power of MPMT is much larger than that of marked graphs, e.g., MPMT-nets can model manufacturing flow lines with unreliable machines and dataflow graphs where choice and synchronization occur. The basic idea leads to the notion of a cut to split the original net system into two subnets. The cuts lead to two aggregated net systems where one of the subnets is reduced to a single transition. A further reduction leads to a basic skeleton. The generalization of the idea leads to multiple cuts, where single cuts can be applied recursively leading to a hierarchical decomposition. Based on the decomposition, a response time approximation technique for the performance analysis is introduced. Also, delay equivalence, which has previously been introduced in the context of marked graphs by Woodside et al., Marie's method and flow equivalent aggregation are applied to the aggregated net systems. The experimental results show that response time approximation converges quickly and shows reasonable accuracy in most cases. The convergence of Marie's method and flow equivalent aggregation are applied to the aggregated net systems. The experimental results show that response time approximation converges quickly and shows reasonable accuracy in most cases. The convergence of Marie's is slower, but the accuracy is generally better. Delay

  8. Net Zero Energy Buildings

    DEFF Research Database (Denmark)

    Marszal, Anna Joanna; Bourrelle, Julien S.; Musall, Eike

    2010-01-01

    and identify possible renewable energy supply options which may be considered in calculations. Finally, the gap between the methodology proposed by each organisation and their respective national building code is assessed; providing an overview of the possible changes building codes will need to undergo......The international cooperation project IEA SHC Task 40 / ECBCS Annex 52 “Towards Net Zero Energy Solar Buildings”, attempts to develop a common understanding and to set up the basis for an international definition framework of Net Zero Energy Buildings (Net ZEBs). The understanding of such buildings...... parameters used in the calculations are discussed and the various renewable supply options considered in the methodologies are summarised graphically. Thus, the paper helps to understand different existing approaches to calculate energy balance in Net ZEBs, highlights the importance of variables selection...

  9. PhysioNet

    Data.gov (United States)

    U.S. Department of Health & Human Services — The PhysioNet Resource is intended to stimulate current research and new investigations in the study of complex biomedical and physiologic signals. It offers free...

  10. TideNet

    Science.gov (United States)

    2015-10-30

    query tide data sources in a desired geographic region of USA and its territories (Figure 1). Users can select a tide data source through the Google Map ...select data sources according to the desired geographic region. It uses the Google Map interface to display data from different sources. Recent...Coastal Inlets Research Program TideNet The TideNet is a web-based Graphical User Interface (GUI) that provides users with GIS mapping tools to

  11. Building Neural Net Software

    OpenAIRE

    Neto, João Pedro; Costa, José Félix

    1999-01-01

    In a recent paper [Neto et al. 97] we showed that programming languages can be translated on recurrent (analog, rational weighted) neural nets. The goal was not efficiency but simplicity. Indeed we used a number-theoretic approach to machine programming, where (integer) numbers were coded in a unary fashion, introducing a exponential slow down in the computations, with respect to a two-symbol tape Turing machine. Implementation of programming languages in neural nets turns to be not only theo...

  12. Interaction Nets in Russian

    OpenAIRE

    Salikhmetov, Anton

    2013-01-01

    Draft translation to Russian of Chapter 7, Interaction-Based Models of Computation, from Models of Computation: An Introduction to Computability Theory by Maribel Fernandez. "In this chapter, we study interaction nets, a model of computation that can be seen as a representative of a class of models based on the notion of 'computation as interaction'. Interaction nets are a graphical model of computation devised by Yves Lafont in 1990 as a generalisation of the proof structures of linear logic...

  13. Programming NET 35

    CERN Document Server

    Liberty, Jesse

    2009-01-01

    Bestselling author Jesse Liberty and industry expert Alex Horovitz uncover the common threads that unite the .NET 3.5 technologies, so you can benefit from the best practices and architectural patterns baked into the new Microsoft frameworks. The book offers a Grand Tour" of .NET 3.5 that describes how the principal technologies can be used together, with Ajax, to build modern n-tier and service-oriented applications. "

  14. Assembling traces, or the conservation of net art

    NARCIS (Netherlands)

    Dekker, A.

    2014-01-01

    Net art is built and distributed through a complex, intricate, and interrelated system of networks that presents an assemblage of art, technology, politics, and social relations ‐ all merged and related to form a variable entity. In the last decade a discussion on how to conserve net art emerged in

  15. RadNet Air Data From Salt Lake City, UT

    Science.gov (United States)

    This page presents radiation air monitoring and air filter analysis data for Salt Lake City, UT from EPA's RadNet system. RadNet is a nationwide network of monitoring stations that measure radiation in air, drinking water and precipitation.

  16. KariaNet: Insights on knowledge sharing | IDRC - International ...

    International Development Research Centre (IDRC) Digital Library (Canada)

    2016-06-03

    Jun 3, 2016 ... KariaNet is a regional network improving knowledge-sharing on agriculture and rural development, to help the rural poor in the Middle East overcome poverty. KariaNet drew practitioners and farmers together in 10 countries in the region, equipping participants with new techniques to improve agricultural ...

  17. The NeuroDevNet vision.

    Science.gov (United States)

    Goldowitz, Dan; McArthur, Dawn

    2011-03-01

    The NeuroDevNet Network of Centres of Excellence has created the first trans-Canada effort devoted to the study of brain development from basic to clinical to societal perspectives. NeuroDevNet's vision is to accelerate efforts to (i) understand normal brain development; (ii) enhance our ability to make diagnoses of when normal development goes awry; and (iii) develop interventions to improve or prevent neurodevelopmental disorders. An early diagnosis coupled with the right therapies, The NeuroDevNet Network of Centres of Excellence has created the first trans-Canada effort devoted to the study of brain development from basic to clinical to societal perspectives. NeuroDevNet's vision is to accelerate efforts to (i) understand normal brain development; (ii) enhance our ability to make diagnoses of when normal development goes awry; and (iii) develop interventions to improve or prevent neurodevelopmental disorders. An early diagnosis coupled with the right therapies, Demonstration Projects. Funds were also allocated for an Opportunities Initiative. There is a wide of expertise amongst NeuroDevNet members. Researchers are supported by the management centre, three Platforms (Imaging; Genetics/ Epigenetics; Animal Models) and three Cores (Neuroethics; Neuroinformatics; Knowledge Translation). We emphasize multidisciplinary training of young researchers to advance the understanding of brain disorders that affect children. Copyright © 2011 Elsevier Inc. All rights reserved.

  18. RadNet (Environmental Radiation Ambient Monitoring System)

    Data.gov (United States)

    U.S. Environmental Protection Agency — RadNet, formerly Environmental Radiation Ambient Monitoring System (ERAMS), is a national network of monitoring stations that regularly collect air, precipitation,...

  19. RadNet-Air Near Real Time Data

    Data.gov (United States)

    U.S. Environmental Protection Agency — RadNet-Air is a national network of air monitoring stations that regularly collect air samples for near real time analysis of radioactivity. The data is transmitted...

  20. Lexikální síť DeriNet: elektronický zdroj pro výzkum derivace v češtině : The Derinet Lexical Network: a Language Data Resource for Research into Derivation in Czech

    Directory of Open Access Journals (Sweden)

    Magda Ševčíková

    2016-03-01

    Full Text Available The paper introduces the DeriNet lexical database, which includes more than 969,000 Czech words interconnected by 718,000 links corresponding to derivational relations (relations between a base word and a word derived from it. Derivational relations were identified by semi-automatic procedures and manual annotation. As the DeriNet network is fully compatible with a large inflectional dictionary of Czech (MorfFlex CZ, it can be used as a resource for an integrating approach to derivational and inflectional morphology of Czech both in linguistic research and in natural language processing.

  1. EnviroNET: Space environment for Strategic Defense Initiative experiments

    Science.gov (United States)

    Lauriente, Michael

    1989-01-01

    EnviroNET is an operational system available to the Strategic Defense Initiative (SDI) experimenters who have access to a terminal or dial-up port. It is a tail node on Space Physics Analysis Network (SPAN) accessible directly or through the national networks via NPSS. Some of the benefits to using EnviroNET include: validated NASA environmental information and interactive space models; facilitating the payload integration process; easy access to expert assistance; and potential for time and cost savings.

  2. NetMOD Version 2.0 Mathematical Framework

    Energy Technology Data Exchange (ETDEWEB)

    Merchant, Bion J. [Sandia National Lab. (SNL-NM), Albuquerque, NM (United States); Young, Christopher J. [Sandia National Lab. (SNL-NM), Albuquerque, NM (United States); Chael, Eric P. [Sandia National Lab. (SNL-NM), Albuquerque, NM (United States)

    2015-08-01

    NetMOD ( Net work M onitoring for O ptimal D etection) is a Java-based software package for conducting simulation of seismic, hydroacoustic and infrasonic networks. Network simulations have long been used to study network resilience to station outages and to determine where additional stations are needed to reduce monitoring thresholds. NetMOD makes use of geophysical models to determine the source characteristics, signal attenuation along the path between the source and station, and the performance and noise properties of the station. These geophysical models are combined to simulate the relative amplitudes of signal and noise that are observed at each of the stations. From these signal-to-noise ratios (SNR), the probabilities of signal detection at each station and event detection across the network of stations can be computed given a detection threshold. The purpose of this document is to clearly and comprehensively present the mathematical framework used by NetMOD, the software package developed by Sandia National Laboratories to assess the monitoring capability of ground-based sensor networks. Many of the NetMOD equations used for simulations are inherited from the NetSim network capability assessment package developed in the late 1980s by SAIC (Sereno et al., 1990).

  3. 8th Conference on Complex Networks

    CERN Document Server

    Menezes, Ronaldo; Sinatra, Roberta; Zlatic, Vinko

    2017-01-01

    This book collects the works presented at the 8th International Conference on Complex Networks (CompleNet) 2017 in Dubrovnik, Croatia, on March 21-24, 2017. CompleNet aims at bringing together researchers and practitioners working in areas related to complex networks. The past two decades has witnessed an exponential increase in the number of publications within this field. From biological systems to computer science, from economic to social systems, complex networks are becoming pervasive in many fields of science. It is this interdisciplinary nature of complex networks that CompleNet aims at addressing. The last decades have seen the emergence of complex networks as the language with which a wide range of complex phenomena in fields as diverse as physics, computer science, and medicine (to name a few) can be properly described and understood. This book provides a view of the state-of-the-art in this dynamic field and covers topics such as network controllability, social structure, online behavior, recommend...

  4. La plataforma .NET

    OpenAIRE

    Fornas Estrada, Miquel

    2008-01-01

    L'aparició de la plataforma .NET Framework ha suposat un canvi molt important en la forma de crear i distribuir aplicacions, degut a que incorpora una sèrie d'innovacions tècniques i productives que simplifiquen molt les tasques necessàries per desenvolupar un projecte. La aparición de la plataforma. NET Framework ha supuesto un cambio muy importante en la forma de crear y distribuir aplicaciones, debido a que incorpora una serie de innovaciones técnicas y productivas que simplifican mucho...

  5. NETS - Danish participation. Final report

    Energy Technology Data Exchange (ETDEWEB)

    Alsen, S. (Grontmij - Carl Bro, Glostrup (Denmark)); Theel, C. (Baltic Sea Solutions, Holeby (Denmark))

    2008-12-15

    Within the NICe-funded project 'Nordic Environmental Technology Solutions (NETS)' a new type of networking at the Nordic level was organized in order to jointly exploit the rapidly growing market potential in the environmental technology sector. The project aimed at increased and professionalized commercialization of Nordic Cleantech in energy and water business segments through 1) closer cooperation and joint marketing activities, 2) a website, 3) cleantech product information via brochures and publications 4) and participating in relevant trade fairs and other industry events. Facilitating business-to-business activities was another core task for the NETS project partners from Norway, Sweden, Finland and Denmark with the aim to encourage total solutions for combined Cleantech system offers. The project has achieved to establish a Cleantech register of 600 Nordic Cleantech companies, a network of 86 member enterprises, produced several publications and brochures for direct technology promotion and a website for direct access to company profiles and contact data. The project partners have attended 14 relevant international Cleantech trade fairs and conferences and facilitated business-to-business contacts added by capacity building offers through two company workshops. The future challenge for the project partners and Nordic Cleantech will be to coordinate the numerous efforts within the Nordic countries in order to reach concerted action and binding of member companies for reliable services, an improved visibility and knowledge exchange. With Cleantech's growing market influence and public awareness, the need to develop total solutions is increasing likewise. Marketing efforts should be encouraged cross-sectional and cross-border among the various levels of involved actors from both the public and the private sector. (au)

  6. Petri Nets-Applications

    Indian Academy of Sciences (India)

    Home; Journals; Resonance – Journal of Science Education; Volume 4; Issue 9. Petri Nets - Applications. Y Narahari. General Article Volume 4 Issue 9 September 1999 pp 44-52. Fulltext. Click here to view fulltext PDF. Permanent link: http://www.ias.ac.in/article/fulltext/reso/004/09/0044-0052. Author Affiliations. Y Narahari ...

  7. Safety nets or straitjackets?

    DEFF Research Database (Denmark)

    Ilsøe, Anna

    2012-01-01

    Does regulation of working hours at national and sector level impose straitjackets, or offer safety nets to employees seeking working time flexibility? This article compares legislation and collective agreements in the metal industries of Denmark, Germany and the USA. The industry has historically...

  8. Coloured Petri Nets

    CERN Document Server

    Jensen, Kurt

    2009-01-01

    Coloured Petri Nets (CPN) is a graphical language for modelling and validating concurrent and distributed systems, and other systems in which concurrency plays a major role. This book introduces the constructs of the CPN modelling language and presents the related analysis methods. It provides a comprehensive road map for the practical use of CPN.

  9. Boom Booom Net Radio

    DEFF Research Database (Denmark)

    Grimshaw, Mark Nicholas; Yong, Louisa; Dobie, Ian

    1999-01-01

    of an existing Internet radio station; Boom Booom Net Radio. Whilst necessity dictates some use of technology-related terminology, wherever possible we have endeavoured to keep such jargon to a minimum and to either explain it in the text or to provide further explanation in the appended glossary....

  10. Game Theory .net.

    Science.gov (United States)

    Shor, Mikhael

    2003-01-01

    States making game theory relevant and accessible to students is challenging. Describes the primary goal of GameTheory.net is to provide interactive teaching tools. Indicates the site strives to unite educators from economics, political and computer science, and ecology by providing a repository of lecture notes and tests for courses using…

  11. Coloured Petri Nets

    DEFF Research Database (Denmark)

    Jensen, Kurt; Kristensen, Lars Michael

    Coloured Petri Nets (CPN) is a graphical language for modelling and validating concurrent and distributed systems, and other systems in which concurrency plays a major role. The development of such systems is particularly challenging because of inherent intricacies like possible nondeterminism...

  12. EUExNet - A European Explosives Network

    Science.gov (United States)

    2010-07-01

    Tallinn Technical University (EE) • University of Latvia (LV) • Sprengschule Dresden (DE) • LEDAP (PT) • Irish Industrial Explosives (IR) • EFEE (EU...Univ. Latvia WP2 DISSEMINATION Chair KCEM WP3 QC and QA Chair KAU WP4 National nodes Chair IExpE WP5 Certification Chair LEDAP WP6 European

  13. A European consensus report on blood cell identification: terminology utilized and morphological diagnosis concordance among 28 experts from 17 countries within the European LeukemiaNet network WP10, on behalf of the ELN Morphology Faculty

    DEFF Research Database (Denmark)

    Zini, Gina; Bain, Barbara; Bettelheim, Peter

    2010-01-01

    This paper describes the methodology used to develop a consensual glossary for haematopoietic cells within Diagnostics-WP10 of European-LeukemiaNet EU-project. This highly interactive work was made possible through the use of the net, requiring only a single two-day meeting of actual confrontatio...

  14. NetMOD Version 2.0 Parameters

    Energy Technology Data Exchange (ETDEWEB)

    Merchant, Bion J. [Sandia National Lab. (SNL-NM), Albuquerque, NM (United States)

    2015-08-01

    NetMOD ( Net work M onitoring for O ptimal D etection) is a Java-based software package for conducting simulation of seismic, hydroacoustic and infrasonic networks. Network simulations have long been used to study network resilience to station outages and to determine where additional stations are needed to reduce monitoring thresholds. NetMOD makes use of geophysical models to determine the source characteristics, signal attenuation along the path between the source and station, and the performance and noise properties of the station. These geophysical models are combined to simulate the relative amplitudes of signal and noise that are observed at each of the stations. From these signal-to-noise ratios (SNR), the probability of detection can be computed given a detection threshold. This document describes the parameters that are used to configure the NetMOD tool and the input and output parameters that make up the simulation definitions.

  15. Markets, voucher subsidies and free nets combine to achieve high bed net coverage in rural Tanzania

    Directory of Open Access Journals (Sweden)

    Gerrets Rene PM

    2008-06-01

    Full Text Available Abstract Background Tanzania has a well-developed network of commercial ITN retailers. In 2004, the government introduced a voucher subsidy for pregnant women and, in mid 2005, helped distribute free nets to under-fives in small number of districts, including Rufiji on the southern coast, during a child health campaign. Contributions of these multiple insecticide-treated net delivery strategies existing at the same time and place to coverage in a poor rural community were assessed. Methods Cross-sectional household survey in 6,331 members of randomly selected 1,752 households of 31 rural villages of Demographic Surveillance System in Rufiji district, Southern Tanzania was conducted in 2006. A questionnaire was administered to every consenting respondent about net use, treatment status and delivery mechanism. Findings Net use was 62.7% overall, 87.2% amongst infants (0 to1 year, 81.8% amongst young children (>1 to 5 years, 54.5% amongst older children (6 to 15 years and 59.6% amongst adults (>15 years. 30.2% of all nets had been treated six months prior to interview. The biggest source of nets used by infants was purchase from the private sector with a voucher subsidy (41.8%. Half of nets used by young children (50.0% and over a third of those used by older children (37.2% were obtained free of charge through the vaccination campaign. The largest source of nets amongst the population overall was commercial purchase (45.1% use and was the primary means for protecting adults (60.2% use. All delivery mechanisms, especially sale of nets at full market price, under-served the poorest but no difference in equity was observed between voucher-subsidized and freely distributed nets. Conclusion All three delivery strategies enabled a poor rural community to achieve net coverage high enough to yield both personal and community level protection for the entire population. Each of them reached their relevant target group and free nets only temporarily

  16. AstroNet-II International Final Conference

    CERN Document Server

    Masdemont, Josep

    2016-01-01

    These are the proceedings of the "AstroNet-II International Final Conference". This conference was one of the last milestones of the Marie-Curie Research Training Network on Astrodynamics "AstroNet-II", that has been funded by the European Commission under the Seventh Framework Programme. The aim of the conference, and thus this book, is to communicate work on astrodynamics problems to an international and specialised audience. The results are presented by both members of the network and invited specialists. The topics include: trajectory design and control, attitude control, structural flexibility of spacecraft and formation flying. The book addresses a readership across the traditional boundaries between mathematics, engineering and industry by offering an interdisciplinary and multisectorial overview of the field.

  17. The Evolution of the Actin Binding NET Superfamily

    Directory of Open Access Journals (Sweden)

    Tim eHawkins

    2014-06-01

    Full Text Available The arabidopsis Networked protein superfamily are plant-specific actin binding proteins which specifically label different membrane compartments and identify specialized sites of interaction between actin and membranes unique to plants. There are 13 members of the superfamily in arabidopsis which group into 4 distinct clades or subfamilies. NET homologues are absent from the genomes of metazoa and fungi, furthermore in Plantae NET sequences are also absent from the genome of mosses and more ancient extant plant clades. A single subfamily of the NET proteins are found encoded in the club moss genome; an extant species of the earliest vascular plants. Gymnosperms have examples from subfamilies 4 and 3 with a hybrid form of NET1 and 2 which shows characteristics of both NET1 and NET2. In addition to NET3 and 4 subfamilies, the NET1 and pollen-expressed NET2 subfamilies are only found as independent sequences in angiosperms. This is consistent with the divergence of reproductive actin. The four subfamilies are conserved across monocots and eudicots with the numbers of members of each clade expanding at this point due in part to regions of genome duplication. Since the emergence of the NET superfamily at the dawn of vascular plants they have continued to develop and diversify in a manner which has mirrored the divergence and complexity of plant species through evolution in the ‘March of Progress’.

  18. A Petri Nets Model for Blockchain Analysis

    OpenAIRE

    Pinna, Andrea; Tonelli, Roberto; Orrú, Matteo; Marchesi, Michele

    2017-01-01

    A Blockchain is a global shared infrastructure where cryptocurrency transactions among addresses are recorded, validated and made publicly available in a peer- to-peer network. To date the best known and important cryptocurrency is the bitcoin. In this paper we focus on this cryptocurrency and in particular on the modeling of the Bitcoin Blockchain by using the Petri Nets formalism. The proposed model allows us to quickly collect information about identities owning Bitcoin addresses and to re...

  19. NetWeaver for EMDS user guide (version 1.1): a knowledge base development system.

    Science.gov (United States)

    Keith M. Reynolds

    1999-01-01

    The guide describes use of the NetWeaver knowledge base development system. Knowledge representation in NetWeaver is based on object-oriented fuzzy-logic networks that offer several significant advantages over the more traditional rulebased representation. Compared to rule-based knowledge bases, NetWeaver knowledge bases are easier to build, test, and maintain because...

  20. 3rd International Winter School and Conference on Network Science

    CERN Document Server

    Barzel, Baruch; Puzis, Rami

    2017-01-01

    This book contains original research chapters related to the interdisciplinary field of complex networks spanning biological and environmental networks, social, technological, and economic networks. Many natural phenomena can be modeled as networks where nodes are the primitive compounds and links represent their interactions, similarities, or distances of sorts. Complex networks have an enormous impact on research in various fields like biology, social sciences, engineering, and cyber-security to name a few. The topology of a network often encompasses important information on the functionality and dynamics of the system or the phenomenon it represents. Network science is an emerging interdisciplinary discipline that provides tools and insights to researchers in a variety of domains. NetSci-X is the central winter conference within the field and brings together leading researchers and innovators to connect, meet, and establish interdisciplinary channels for collaboration. It is the largest and best known even...

  1. Food Safety Nets:

    OpenAIRE

    Haggblade, Steven; Diallo, Boubacar; Staatz, John; Theriault, Veronique; Traoré, Abdramane

    2013-01-01

    Food and social safety nets have a history as long as human civilization. In hunter gatherer societies, food sharing is pervasive. Group members who prove unlucky in the short run, hunting or foraging, receive food from other households in anticipation of reciprocal consideration at a later time (Smith 1988). With the emergence of the first large sedentary civilizations in the Middle East, administrative systems developed specifically around food storage and distribution. The ancient Egyptian...

  2. Net technical assessment

    OpenAIRE

    Wegmann, David G.

    1989-01-01

    Approved for public release; distribution is unlimited. The present and near term military balance of power between the U.S. and the Soviet Union can be expressed in a variety of net assessments. One can examine the strategic nuclear balance, the conventional balance in Europe, the maritime balance, and many others. Such assessments are essential not only for policy making but for arms control purposes and future force structure planning. However, to project the future military balance, on...

  3. UbuntuNet Alliance : Consolidating Research and Education ...

    International Development Research Centre (IDRC) Digital Library (Canada)

    The first phase of this project (104584) allowed UbuntuNet Alliance to develop a master plan and organizational structure to act as a regional network for Eastern and Southern African research and education networks. The second phase will enable the Alliance to implement that master plan. Specific activities will include ...

  4. Using WordNet for Building WordNets

    CERN Document Server

    Farreres, X; Farreres, Xavier; Rodriguez, Horacio; Rigau, German

    1998-01-01

    This paper summarises a set of methodologies and techniques for the fast construction of multilingual WordNets. The English WordNet is used in this approach as a backbone for Catalan and Spanish WordNets and as a lexical knowledge resource for several subtasks.

  5. Sol-Rad Net Flux (L 1.0, 1.5, 2.0)

    Data.gov (United States)

    National Aeronautics and Space Administration — SolRad-Net (Solar Radiation Network) is an established network of ground-based sensors providing high-frequency solar flux measurements in quasi-realtime to the...

  6. Few-body physics: Then and now

    Energy Technology Data Exchange (ETDEWEB)

    Friar, J.L.

    1994-07-01

    This review describes past progress in selected topics of few-body nuclear physics, as well as calculations and experiments that the author believes necessary for further orderly progress. Review also gives specific data on binding energies and nuclear radii. 36 references.

  7. Optical analysis for few TMDC materials

    Indian Academy of Sciences (India)

    Home; Journals; Bulletin of Materials Science; Volume 38; Issue 7. Optical analysis for few ... The direct and indirect energy gaps and phonon energies for all crystals have been estimated. The results obtained are ... Mehul Dave1. Natubhai V. Patel College of Pure and Applied Sciences, Vallabh Vidyanagar 388 120, India ...

  8. Casting a larger net

    DEFF Research Database (Denmark)

    Hansen, Morten Balle; Villadsen, Anders Ryom

    2013-01-01

    Managerial networking is an important part of public management. Research has forcefully demonstrated how this aspect of management directly and indirectly is related to organizational outcomes. Much less is known, however, about the determinants of managerial networking. This is especially true......-tier managers in Danish municipalities. Results suggest that managers engage in two different types of external networking, and that the amount of networking behavior is determined in a complex interplay of the three sets of explanatory factors. Contributions to existing research are discussed....... with regards to individual-level explanations. This paper addresses this important gap and proposes a composite model of managerial networking as formed by three sets of factors: personal, job-related, and organizational. On this background a set of hypotheses are developed and tested in a study of top...

  9. Relativistic Few-Body Hadronic Physics Calculations

    Energy Technology Data Exchange (ETDEWEB)

    Polyzou, Wayne [Univ. of Iowa, Iowa City, IA (United States)

    2016-06-20

    The goal of this research proposal was to use ``few-body'' methods to understand the structure and reactions of systems of interacting hadrons (neutrons, protons, mesons, quarks) over a broad range of energy scales. Realistic mathematical models of few-hadron systems have the advantage that they are sufficiently simple that they can be solved with mathematically controlled errors. These systems are also simple enough that it is possible to perform complete accurate experimental measurements on these systems. Comparison between theory and experiment puts strong constraints on the structure of the models. Even though these systems are ``simple'', both the experiments and computations push the limits of technology. The important property of ``few-body'' systems is that the ``cluster property'' implies that the interactions that appear in few-body systems are identical to the interactions that appear in complicated many-body systems. Of particular interest are models that correctly describe physics at distance scales that are sensitive to the internal structure of the individual nucleons. The Heisenberg uncertainty principle implies that in order to be sensitive to physics on distance scales that are a fraction of the proton or neutron radius, a relativistic treatment of quantum mechanics is necessary. The research supported by this grant involved 30 years of effort devoted to studying all aspects of interacting two and three-body systems. Realistic interactions were used to compute bound states of two- and three-nucleon, and two- and three-quark systems. Scattering observables for these systems were computed for a broad range of energies - from zero energy scattering to few GeV scattering, where experimental evidence of sub-nucleon degrees of freedom is beginning to appear. Benchmark calculations were produced, which when compared with calculations of other groups provided an essential check on these complicated calculations. In

  10. Proof nets for lingusitic analysis

    NARCIS (Netherlands)

    Moot, R.C.A.

    2002-01-01

    This book investigates the possible linguistic applications of proof nets, redundancy free representations of proofs, which were introduced by Girard for linear logic. We will adapt the notion of proof net to allow the formulation of a proof net calculus which is soundand complete for the

  11. Teaching Tennis for Net Success.

    Science.gov (United States)

    Young, Bryce

    1989-01-01

    A program for teaching tennis to beginners, NET (Net Easy Teaching) is described. The program addresses three common needs shared by tennis students: active involvement in hitting the ball, clearing the net, and positive reinforcement. A sample lesson plan is included. (IAH)

  12. Net4Care Ecosystem Website

    DEFF Research Database (Denmark)

    Christensen, Henrik Bærbak; Hansen, Klaus Marius; Rasmussen, Morten

    2012-01-01

    is a tele-monitoring scenario in which Net4Care clients are deployed in a gateway in private homes. Medical devices then connect to these gateways and transmit their observations to a Net4Care server. In turn the Net4Care server creates valid clinical HL7 documents, stores them in a national XDS repository...

  13. ExplaNet: A Collaborative Learning Tool and Hybrid Recommender System for Student-Authored Explanations

    Science.gov (United States)

    Masters, Jessica; Madhyastha, Tara; Shakouri, Ali

    2008-01-01

    ExplaNet is a web-based, anonymous, asynchronous explanation-sharing network. Instructors post questions to the network and students submit explanatory answers. Students then view and rank the explanations submitted by their peers before optionally resubmitting a final and revised answer. Three classroom evaluations of ExplaNet showed that by…

  14. Master Robotic Net

    Directory of Open Access Journals (Sweden)

    Vladimir Lipunov

    2010-01-01

    Full Text Available The main goal of the MASTER-Net project is to produce a unique fast sky survey with all sky observed over a single night down to a limiting magnitude of 19-20. Such a survey will make it possible to address a number of fundamental problems: search for dark energy via the discovery and photometry of supernovae (including SNIa, search for exoplanets, microlensing effects, discovery of minor bodies in the Solar System, and space-junk monitoring. All MASTER telescopes can be guided by alerts, and we plan to observe prompt optical emission from gamma-ray bursts synchronously in several filters and in several polarization planes.

  15. Helminth.net: expansions to Nematode.net and an introduction to Trematode.net

    Science.gov (United States)

    Martin, John; Rosa, Bruce A.; Ozersky, Philip; Hallsworth-Pepin, Kymberlie; Zhang, Xu; Bhonagiri-Palsikar, Veena; Tyagi, Rahul; Wang, Qi; Choi, Young-Jun; Gao, Xin; McNulty, Samantha N.; Brindley, Paul J.; Mitreva, Makedonka

    2015-01-01

    Helminth.net (http://www.helminth.net) is the new moniker for a collection of databases: Nematode.net and Trematode.net. Within this collection we provide services and resources for parasitic roundworms (nematodes) and flatworms (trematodes), collectively known as helminths. For over a decade we have provided resources for studying nematodes via our veteran site Nematode.net (http://nematode.net). In this article, (i) we provide an update on the expansions of Nematode.net that hosts omics data from 84 species and provides advanced search tools to the broad scientific community so that data can be mined in a useful and user-friendly manner and (ii) we introduce Trematode.net, a site dedicated to the dissemination of data from flukes, flatworm parasites of the class Trematoda, phylum Platyhelminthes. Trematode.net is an independent component of Helminth.net and currently hosts data from 16 species, with information ranging from genomic, functional genomic data, enzymatic pathway utilization to microbiome changes associated with helminth infections. The databases’ interface, with a sophisticated query engine as a backbone, is intended to allow users to search for multi-factorial combinations of species’ omics properties. This report describes updates to Nematode.net since its last description in NAR, 2012, and also introduces and presents its new sibling site, Trematode.net. PMID:25392426

  16. Mars MetNet Mission Status

    Science.gov (United States)

    Harri, Ari-Matti; Aleksashkin, Sergei; Arruego, Ignacio; Schmidt, Walter; Genzer, Maria; Vazquez, Luis; Haukka, Harri

    2015-04-01

    New kind of planetary exploration mission for Mars is under development in collaboration between the Finnish Meteorological Institute (FMI), Lavochkin Association (LA), Space Research Institute (IKI) and Institutio Nacional de Tecnica Aerospacial (INTA). The Mars MetNet mission is based on a new semi-hard landing vehicle called MetNet Lander (MNL). The scientific payload of the Mars MetNet Precursor [1] mission is divided into three categories: Atmospheric instruments, Optical devices and Composition and structure devices. Each of the payload instruments will provide significant insights in to the Martian atmospheric behavior. The key technologies of the MetNet Lander have been qualified and the electrical qualification model (EQM) of the payload bay has been built and successfully tested. 1. MetNet Lander The MetNet landing vehicles are using an inflatable entry and descent system instead of rigid heat shields and parachutes as earlier semi-hard landing devices have used. This way the ratio of the payload mass to the overall mass is optimized. The landing impact will burrow the payload container into the Martian soil providing a more favorable thermal environment for the electronics and a suitable orientation of the telescopic boom with external sensors and the radio link antenna. It is planned to deploy several tens of MNLs on the Martian surface operating at least partly at the same time to allow meteorological network science. 2. Scientific Payload The payload of the two MNL precursor models includes the following instruments: Atmospheric instruments: 1. MetBaro Pressure device 2. MetHumi Humidity device 3. MetTemp Temperature sensors Optical devices: 1. PanCam Panoramic 2. MetSIS Solar irradiance sensor with OWLS optical wireless system for data transfer 3. DS Dust sensor The descent processes dynamic properties are monitored by a special 3-axis accelerometer combined with a 3-axis gyrometer. The data will be sent via auxiliary beacon antenna throughout the

  17. Conversion of Continuous-Valued Deep Networks to Efficient Event-Driven Networks for Image Classification

    Directory of Open Access Journals (Sweden)

    Bodo Rueckauer

    2017-12-01

    Full Text Available Spiking neural networks (SNNs can potentially offer an efficient way of doing inference because the neurons in the networks are sparsely activated and computations are event-driven. Previous work showed that simple continuous-valued deep Convolutional Neural Networks (CNNs can be converted into accurate spiking equivalents. These networks did not include certain common operations such as max-pooling, softmax, batch-normalization and Inception-modules. This paper presents spiking equivalents of these operations therefore allowing conversion of nearly arbitrary CNN architectures. We show conversion of popular CNN architectures, including VGG-16 and Inception-v3, into SNNs that produce the best results reported to date on MNIST, CIFAR-10 and the challenging ImageNet dataset. SNNs can trade off classification error rate against the number of available operations whereas deep continuous-valued neural networks require a fixed number of operations to achieve their classification error rate. From the examples of LeNet for MNIST and BinaryNet for CIFAR-10, we show that with an increase in error rate of a few percentage points, the SNNs can achieve more than 2x reductions in operations compared to the original CNNs. This highlights the potential of SNNs in particular when deployed on power-efficient neuromorphic spiking neuron chips, for use in embedded applications.

  18. NETS FOR PEACH PROTECTED CULTIVATION

    Directory of Open Access Journals (Sweden)

    Evelia Schettini

    2012-06-01

    Full Text Available The aim of this paper was to investigate the radiometric properties of coloured nets used to protect a peach cultivation. The modifications of the solar spectral distribution, mainly in the R and FR wavelength band, influence plant photomorphogenesis by means of the phytochrome and cryptochrome. The phytochrome response is characterized in terms of radiation rate in the red wavelengths (R, 600-700 nm to that in the farred radiation (FR, 700-800 nm, i.e. the R/FR ratio. The effects of the blue radiation (B, 400-500 nm is investigated by the ratio between the blue radiation and the far-red radiation, i.e. the B/FR ratio. A BLUE net, a RED net, a YELLOW net, a PEARL net, a GREY net and a NEUTRAL net were tested in Bari (Italy, latitude 41° 05’ N. Peach trees were located in pots inside the greenhouses and in open field. The growth of the trees cultivated in open field was lower in comparison to the growth of the trees grown under the nets. The RED, PEARL, YELLOW and GREY nets increased the growth of the trees more than the other nets. The nets positively influenced the fruit characteristics, such as fruit weight and flesh firmness.

  19. Network switching strategy for energy conservation in heterogeneous networks.

    Science.gov (United States)

    Song, Yujae; Choi, Wooyeol; Baek, Seungjae

    2017-01-01

    In heterogeneous networks (HetNets), the large-scale deployment of small base stations (BSs) together with traditional macro BSs is an economical and efficient solution that is employed to address the exponential growth in mobile data traffic. In dense HetNets, network switching, i.e., handovers, plays a critical role in connecting a mobile terminal (MT) to the best of all accessible networks. In the existing literature, a handover decision is made using various handover metrics such as the signal-to-noise ratio, data rate, and movement speed. However, there are few studies on handovers that focus on energy efficiency in HetNets. In this paper, we propose a handover strategy that helps to minimize energy consumption at BSs in HetNets without compromising the quality of service (QoS) of each MT. The proposed handover strategy aims to capture the effect of the stochastic behavior of handover parameters and the expected energy consumption due to handover execution when making a handover decision. To identify the validity of the proposed handover strategy, we formulate a handover problem as a constrained Markov decision process (CMDP), by which the effects of the stochastic behaviors of handover parameters and consequential handover energy consumption can be accurately reflected when making a handover decision. In the CMDP, the aim is to minimize the energy consumption to service an MT over the lifetime of its connection, and the constraint is to guarantee the QoS requirements of the MT given in terms of the transmission delay and call-dropping probability. We find an optimal policy for the CMDP using a combination of the Lagrangian method and value iteration. Simulation results verify the validity of the proposed handover strategy.

  20. Network switching strategy for energy conservation in heterogeneous networks.

    Directory of Open Access Journals (Sweden)

    Yujae Song

    Full Text Available In heterogeneous networks (HetNets, the large-scale deployment of small base stations (BSs together with traditional macro BSs is an economical and efficient solution that is employed to address the exponential growth in mobile data traffic. In dense HetNets, network switching, i.e., handovers, plays a critical role in connecting a mobile terminal (MT to the best of all accessible networks. In the existing literature, a handover decision is made using various handover metrics such as the signal-to-noise ratio, data rate, and movement speed. However, there are few studies on handovers that focus on energy efficiency in HetNets. In this paper, we propose a handover strategy that helps to minimize energy consumption at BSs in HetNets without compromising the quality of service (QoS of each MT. The proposed handover strategy aims to capture the effect of the stochastic behavior of handover parameters and the expected energy consumption due to handover execution when making a handover decision. To identify the validity of the proposed handover strategy, we formulate a handover problem as a constrained Markov decision process (CMDP, by which the effects of the stochastic behaviors of handover parameters and consequential handover energy consumption can be accurately reflected when making a handover decision. In the CMDP, the aim is to minimize the energy consumption to service an MT over the lifetime of its connection, and the constraint is to guarantee the QoS requirements of the MT given in terms of the transmission delay and call-dropping probability. We find an optimal policy for the CMDP using a combination of the Lagrangian method and value iteration. Simulation results verify the validity of the proposed handover strategy.

  1. The equivalency between logic Petri workflow nets and workflow nets.

    Science.gov (United States)

    Wang, Jing; Yu, ShuXia; Du, YuYue

    2015-01-01

    Logic Petri nets (LPNs) can describe and analyze batch processing functions and passing value indeterminacy in cooperative systems. Logic Petri workflow nets (LPWNs) are proposed based on LPNs in this paper. Process mining is regarded as an important bridge between modeling and analysis of data mining and business process. Workflow nets (WF-nets) are the extension to Petri nets (PNs), and have successfully been used to process mining. Some shortcomings cannot be avoided in process mining, such as duplicate tasks, invisible tasks, and the noise of logs. The online shop in electronic commerce in this paper is modeled to prove the equivalence between LPWNs and WF-nets, and advantages of LPWNs are presented.

  2. Modeling Clustered Data with Very Few Clusters.

    Science.gov (United States)

    McNeish, Daniel; Stapleton, Laura M

    2016-01-01

    Small-sample inference with clustered data has received increased attention recently in the methodological literature, with several simulation studies being presented on the small-sample behavior of many methods. However, nearly all previous studies focus on a single class of methods (e.g., only multilevel models, only corrections to sandwich estimators), and the differential performance of various methods that can be implemented to accommodate clustered data with very few clusters is largely unknown, potentially due to the rigid disciplinary preferences. Furthermore, a majority of these studies focus on scenarios with 15 or more clusters and feature unrealistically simple data-generation models with very few predictors. This article, motivated by an applied educational psychology cluster randomized trial, presents a simulation study that simultaneously addresses the extreme small sample and differential performance (estimation bias, Type I error rates, and relative power) of 12 methods to account for clustered data with a model that features a more realistic number of predictors. The motivating data are then modeled with each method, and results are compared. Results show that generalized estimating equations perform poorly; the choice of Bayesian prior distributions affects performance; and fixed effect models perform quite well. Limitations and implications for applications are also discussed.

  3. Selectivity of penaeid trap nets used in south eastern Australia

    Directory of Open Access Journals (Sweden)

    Matt K. Broadhurst

    2004-09-01

    Full Text Available Two experiments were done to estimate the selectivity of commercial and modified trap-net configurations in New South Wales (NSW, southeastern Australia. In the first experiment, a commercial trap net made entirely from 25 mm mesh and designed for use in shallow water was alternatively fished with a fine-meshed (9.5 mm netting trap net (used as a control. In the second experiment, two trap-net configurations designed for use in deeper water and comprising the same anterior section (made from 25 mm mesh, but with different bunts made from (i the conventional 25 mm mesh and (ii 31 mm mesh were alternately fished against the control. Both of the conventional trap nets (comprising 25 mm mesh throughout had low amounts of bycatch and similarly selected eastern king Penaeus plebejus, greasyback Metapenaeus bennettae and school prawns Metapenaeus macleayi across narrow selection ranges (< 3.4 mm and at 50% retention lengths (between 18.53 and 21.50 mm that were larger than the average commercially-accepted sizes (15-17 mm CL. Analyses of the selectivities and relative efficiencies of the trap-net configurations comprising the 25 and 31 mm bunts showed no benefit, in terms of maintaining prawn catches and reducing unwanted bycatch, associated with increasing mesh size in these gears. The utility of trap nets for selectively harvesting penaeids is discussed. We conclude that this type of fishing gear appears to have few deleterious impacts.

  4. Netted LPI RADARs

    Science.gov (United States)

    2011-09-01

    that range bin masking should also be quite effective. They argue that if a section of the radar waveform recorded by DRFM or repeater...effective. A Digital RF Memory ( DRFM ) can be used to focus the available power of the jammer and inject Doppler noise only a few KHz wide, matching to the

  5. Coloured Petri Nets

    DEFF Research Database (Denmark)

    Jensen, Kurt; Kristensen, Lars Michael

    studies that illustrate the practical use of CPN modelling and validation for design, specification, simulation, verification and implementation in various application domains. Their presentation primarily aims at readers interested in the practical use of CPN. Thus all concepts and constructs are first......Coloured Petri Nets (CPN) is a graphical language for modelling and validating concurrent and distributed systems, and other systems in which concurrency plays a major role. The development of such systems is particularly challenging because of inherent intricacies like possible nondeterminism...... and the immense number of possible execution sequences. In this textbook, Jensen and Kristensen introduce the constructs of the CPN modelling language and present the related analysis methods in detail. They also provide a comprehensive road map for the practical use of CPN by showcasing selected industrial case...

  6. 7th Workshop on Complex Networks

    CERN Document Server

    Gonçalves, Bruno; Menezes, Ronaldo; Sinatra, Roberta

    2016-01-01

    The last decades have seen the emergence of Complex Networks as the language with which a wide range of complex phenomena in fields as diverse as Physics, Computer Science, and Medicine (to name just a few) can be properly described and understood. This book provides a view of the state of the art in this dynamic field and covers topics ranging from network controllability, social structure, online behavior, recommendation systems, and network structure. This book includes the peer-reviewed list of works presented at the 7th Workshop on Complex Networks CompleNet 2016 which was hosted by the Université de Bourgogne, France, from March 23-25, 2016. The 28 carefully reviewed and selected contributions in this book address many topics related to complex networks and have been organized in seven major groups: (1) Theory of Complex Networks, (2) Multilayer networks, (3) Controllability of networks, (4) Algorithms for networks, (5) Community detection, (6) Dynamics and spreading phenomena on networks, (7) Applicat...

  7. Few-body models for nuclear astrophysics

    Directory of Open Access Journals (Sweden)

    P. Descouvemont

    2014-02-01

    Full Text Available We present applications of microscopic models to nuclear reactions of astrophysical interest, and we essentially focus on few-body systems. The calculation of radiative-capture and transfer cross sections is outlined, and we discuss the corresponding reaction rates. Microscopic theories are briefly presented, and we emphasize on the matrix elements of four-body systems. The microscopic extension of the R-matrix theory to nuclear reactions is described. Applications to the 2H(d, γ4He, 2H(d, p3H and 2H(d, n3He reactions are presented. We show the importance of the tensor force to reproduce the low-energy behaviour of the cross sections.

  8. Laws of biology: why so few?

    Science.gov (United States)

    Dhar, Pawan K; Giuliani, Alessandro

    2010-03-01

    Finding fundamental organizing principles is the current intellectual front end of systems biology. From a hydrogen atom to the whole cell level, organisms manage massively parallel and massively interactive processes over several orders of magnitude of size. To manage this scale of informational complexity it is natural to expect organizing principles that determine higher order behavior. Currently, there are only hints of such organizing principles but no absolute evidences. Here, we present an approach as old as Mendel that could help uncover fundamental organizing principles in biology. Our approach essentially consists of identifying constants at various levels and weaving them into a hierarchical chassis. As we identify and organize constants, from pair-wise interactions to networks, our understanding of the fundamental principles in biology will improve, leading to a theory in biology.

  9. Few quantum particles on one dimensional lattices

    Energy Technology Data Exchange (ETDEWEB)

    Valiente Cifuentes, Manuel

    2010-06-18

    There is currently a great interest in the physics of degenerate quantum gases and low-energy few-body scattering due to the recent experimental advances in manipulation of ultracold atoms by light. In particular, almost perfect periodic potentials, called optical lattices, can be generated. The lattice spacing is fixed by the wavelength of the laser field employed and the angle betwen the pair of laser beams; the lattice depth, defining the magnitude of the different band gaps, is tunable within a large interval of values. This flexibility permits the exploration of different regimes, ranging from the ''free-electron'' picture, modified by the effective mass for shallow optical lattices, to the tight-binding regime of a very deep periodic potential. In the latter case, effective single-band theories, widely used in condensed matter physics, can be implemented with unprecedent accuracy. The tunability of the lattice depth is nowadays complemented by the use of magnetic Feshbach resonances which, at very low temperatures, can vary the relevant atom-atom scattering properties at will. Moreover, optical lattices loaded with gases of effectively reduced dimensionality are experimentally accessible. This is especially important for one spatial dimension, since most of the exactly solvable models in many-body quantum mechanics deal with particles on a line; therefore, experiments with one-dimensional gases serve as a testing ground for many old and new theories which were regarded as purely academic not so long ago. The physics of few quantum particles on a one-dimensional lattice is the topic of this thesis. Most of the results are obtained in the tight-binding approximation, which is amenable to exact numerical or analytical treatment. For the two-body problem, theoretical methods for calculating the stationary scattering and bound states are developed. These are used to obtain, in closed form, the two-particle solutions of both the Hubbard and

  10. Linear Logic on Petri Nets

    DEFF Research Database (Denmark)

    Engberg, Uffe Henrik; Winskel, Glynn

    This article shows how individual Petri nets form models of Girard's intuitionistic linear logic. It explores questions of expressiveness and completeness of linear logic with respect to this interpretation. An aim is to use Petri nets to give an understanding of linear logic and give some apprai...

  11. Reference Guide Microsoft.NET

    NARCIS (Netherlands)

    Zee M van der; Verspaij GJ; Rosbergen S; IMP; NMD

    2003-01-01

    Developers, administrators and managers can get more understanding of the .NET technology with this report. They can also make better choices how to use this technology. The report describes the results and conclusions of a study of the usability for the RIVM of this new generation .NET development

  12. Net neutrality and audiovisual services

    NARCIS (Netherlands)

    van Eijk, N.; Nikoltchev, S.

    2011-01-01

    Net neutrality is high on the European agenda. New regulations for the communication sector provide a legal framework for net neutrality and need to be implemented on both a European and a national level. The key element is not just about blocking or slowing down traffic across communication

  13. System and Network Security Acronyms and Abbreviations

    Science.gov (United States)

    2009-09-01

    Systems Agency DLL dynamic link library DMA direct memory access DMZ demilitarized zone DN distinguished name DN domain name DNP Distributed...NetBIOS Network Basic Input/Output System NetBT NetBIOS over TCP/IP NFAT network forensic analysis tool NFC near field communication NFS network file...Software Reference Library NSS Network Security Services NSTB National SCADA Test Bed NSTISSC National Security Telecommunications and Information

  14. A Small Universal Petri Net

    Directory of Open Access Journals (Sweden)

    Dmitry A. Zaitsev

    2013-09-01

    Full Text Available A universal deterministic inhibitor Petri net with 14 places, 29 transitions and 138 arcs was constructed via simulation of Neary and Woods' weakly universal Turing machine with 2 states and 4 symbols; the total time complexity is exponential in the running time of their weak machine. To simulate the blank words of the weakly universal Turing machine, a couple of dedicated transitions insert their codes when reaching edges of the working zone. To complete a chain of a given Petri net encoding to be executed by the universal Petri net, a translation of a bi-tag system into a Turing machine was constructed. The constructed Petri net is universal in the standard sense; a weaker form of universality for Petri nets was not introduced in this work.

  15. Knotting the Net

    DEFF Research Database (Denmark)

    Revellino, Silvana; Mouritsen, Jan

    2017-01-01

    Research on megaprojects points out the crucial role of politics in managing major infrastructure projects. Politics is often here presented as misrepresentation by the project maker who manipulates everyone else. This is where power is concentrated in the hands of the few. However, this approach...... may overlook another lateral version of politics by which power is plural and ubiquitous, and which, through Latour's notion of Dingpolitics, combines the questions ‘who has to be taken into account’ and ‘what has to be taken into account’. This brings the analysis further than stakeholder theory...... with its focus on abstract structural interests, towards articulated concerns about the objects that matter to people. Through analysis of the Italian system for stakeholder management—the so-called Conferenza di Servizi, which was organised according to stakeholder theory with an emphasis...

  16. Neural network technologies

    Science.gov (United States)

    Villarreal, James A.

    1991-01-01

    A whole new arena of computer technologies is now beginning to form. Still in its infancy, neural network technology is a biologically inspired methodology which draws on nature's own cognitive processes. The Software Technology Branch has provided a software tool, Neural Execution and Training System (NETS), to industry, government, and academia to facilitate and expedite the use of this technology. NETS is written in the C programming language and can be executed on a variety of machines. Once a network has been debugged, NETS can produce a C source code which implements the network. This code can then be incorporated into other software systems. Described here are various software projects currently under development with NETS and the anticipated future enhancements to NETS and the technology.

  17. High-level Petri Nets

    DEFF Research Database (Denmark)

    High-level Petri nets are now widely used in both theoretical analysis and practical modelling of concurrent systems. The main reason for the success of this class of net models is that they make it possible to obtain much more succinct and manageable descriptions than can be obtained by means...... of low-level Petri nets - while, on the other hand, they still offer a wide range of analysis methods and tools. The step from low-level nets to high-level nets can be compared to the step from assembly languages to modern programming languages with an elaborated type concept. In low-level nets...... there is only one kind of token and this means that the state of a place is described by an integer (and in many cases even by a boolean). In high-level nets each token can carry a complex information/data - which, e.g., may describe the entire state of a process or a data base. Today most practical...

  18. UbuntuNet Alliance : Consolidating Research and Education ...

    International Development Research Centre (IDRC) Digital Library (Canada)

    13 août 2009 ... UbuntuNet Alliance : Consolidating Research and Education Networking - Phase II. African universities and research institutions are predominantly consumers of intellectual outputs from other regions. The continent remains marginal when it comes to the production and dissemination of knowledge.

  19. Transactions on Petri Nets and Other Models of Concurrency VI

    DEFF Research Database (Denmark)

    The sixth volume of ToPNoC includes revised versions of selected papers from workshops and tutorials held at the 32nd International Conference on Application and Theory of Petri Nets and Concurrency. It also contains a special section on Networks, Protocols, and Services, as well as a contributed...

  20. Implementation architecture and multithreaded runtime system of S-Net

    NARCIS (Netherlands)

    Grelck, C.; Penczek, F.; Scholz, S.-B.; Chitil, O.

    2011-01-01

    S-Net is a declarative coordination language and component technology aimed at modern multi-core/many-core architectures and systems-on-chip. It builds on the concept of stream processing to structure networks of communicating asynchronous components, which can be implemented using a conventional

  1. Casting CurriculumNet wider | IDRC - International Development ...

    International Development Research Centre (IDRC) Digital Library (Canada)

    2011-02-02

    Feb 2, 2011 ... The project expanded through a pilot computer network to six rural schools in districts surrounding the hub at NCDC in Kampala. Eventually CurriculumNet will achieve wider use throughout Uganda. As part of the project, representatives from Ugandan educational bodies did participatory assessments to ...

  2. Net neutrality and the value chain for video

    NARCIS (Netherlands)

    Nooren, P.A.; Leurdijk, A.; Eijk, N. van

    2012-01-01

    Purpose: Video distribution over the internet leads to heated net-neutrality related debates between network operators and over-the-top application providers. The purpose of this paper is to analyze this debate from a new perspective that takes into account all of the assets that companies try to

  3. Classification of handwritten digits using a RAM neural net architecture

    DEFF Research Database (Denmark)

    Jørgensen, T.M.

    1997-01-01

    Results are reported on the task of recognizing handwritten digits without any advanced pre-processing. The result are obtained using a RAM-based neural network, making use of small receptive fields. Furthermore, a technique that introduces negative weights into the RAM net is reported. The results...

  4. Translating feedforward neural nets to SOM-like maps

    NARCIS (Netherlands)

    van der Zwaag, B.J.; Spaanenburg, Lambert; Slump, Cornelis H.

    A major disadvantage of feedforward neural networks is still the difficulty to gain insight into their internal functionality. This is much less the case for, e.g., nets that are trained unsupervised, such as Kohonen’s self-organizing feature maps (SOMs). These offer a direct view into the stored

  5. Network Effects Versus Strategic Discounting

    DEFF Research Database (Denmark)

    Zucchini, Leon; Claussen, Jörg; Trüg, Moritiz

    Mobile telecommunication operators routinely charge subscribers lower prices for calls on their own network than for calls to other networks (on-net discounts). Studies on tariff-mediated network effects suggest this is due to large operators using on-net discounts to damage smaller rivals....... Alternatively, research on strategic discounting suggests small operators use on-net discounts to advertise with low on-net prices. We test the relative strength of these effects using data on tariff setting in German mobile telecommunications between 2001 and 2009. We find that large operators are more likely...... to offer tariffs with on-net discounts but there is no consistently significant difference in the magnitude of discounts. Our results suggest that tariff-mediated network effects are the main cause of on-net discounts....

  6. Pro asynchronous programming with .NET

    CERN Document Server

    Blewett, Richard; Ltd, Rock Solid Knowledge

    2014-01-01

    Pro Asynchronous Programming with .NET teaches the essential skill of asynchronous programming in .NET. It answers critical questions in .NET application development, such as: how do I keep my program responding at all times to keep my users happy how do I make the most of the available hardware how can I improve performanceIn the modern world, users expect more and more from their applications and devices, and multi-core hardware has the potential to provide it. But it takes carefully crafted code to turn that potential into responsive, scalable applications.With Pro Asynchronous Programming

  7. Conformal Nets II: Conformal Blocks

    Science.gov (United States)

    Bartels, Arthur; Douglas, Christopher L.; Henriques, André

    2017-08-01

    Conformal nets provide a mathematical formalism for conformal field theory. Associated to a conformal net with finite index, we give a construction of the `bundle of conformal blocks', a representation of the mapping class groupoid of closed topological surfaces into the category of finite-dimensional projective Hilbert spaces. We also construct infinite-dimensional spaces of conformal blocks for topological surfaces with smooth boundary. We prove that the conformal blocks satisfy a factorization formula for gluing surfaces along circles, and an analogous formula for gluing surfaces along intervals. We use this interval factorization property to give a new proof of the modularity of the category of representations of a conformal net.

  8. Hyporheic network (Hyporheisches Netzwerk)

    Science.gov (United States)

    Lewandowski, J.; Fleckenstein, J.; Hoehn, E.; Nützmann, G.; Radke, M.; Saenger, N.; Schmidt, C.

    2009-04-01

    The transition zone between surface waters like streams and rivers and the adjacent aquifers is a zone of paramount ecological importance. Due to the complexity of exchange processes, their temporal variability, and the spatial heterogeneity of the ecotone, the understanding and ability to modell the hydrodynamic, hydrochemical, and (micro-)biological processes is still limited. Therefore, a network of scientists and practitioners involved in research and management of hyporheic zones in German-speaking countries (Germany, Switzerland, Austria) is propsed in analogy to the hyporheic network (www.hyporheic.net) in the UK. The initiators of the network anticipate that an intense scientific exchange of knowledge and methods will improve our understanding of hyporheic processes and in turn our ability to manage them. The network will facilitate the formation of research groups to identify and understand key processes and their interactions. Research will be focused at a few major study sites, to bring together different expertise to allow more detailed, interdisciplinary investigations. Those sites can serve as crystallisation points for new research projects. Exchange within the network will be organized via an internet platform (www.hyporheisches-netzwerk.de), regular workshops, and several working groups dealing with different topics. A fast knowledge transfer is a further aim of the collaboration in order to shorten the time-lag between scientific findings and their implementation into management practice. Water resources management authorities should also be involved in the network to address urgent problems and direct some capacities to answer those questions. For instance, changes in geomorphology, water and temperature regimes as well as other anthropogenic impacts might increase the need for cold water refugia and altered flow regimes to maintain biodiversity. Additional qualitative improvements are required by the EU water framework directive.

  9. Fiscal 1998 research report on International Clean Energy Network using Hydrogen Conversion (WE-NET). Subtask 2. Research on promotion of international cooperation (research on standardization of hydrogen energy technologies); 1998 nendo suiso riyo kokusai clean energy system gijutsu (WE-NET) sub task. 2. Kokusai kyoryoku suishin no tame no chosa kento (suiso energy gijutsu hyojunka ni kansuru chosa kento)

    Energy Technology Data Exchange (ETDEWEB)

    NONE

    1999-03-01

    This report summarizes the fiscal 1998 research result on the basic research on standardization of hydrogen energy technologies, and ISO/TC197. As for the standardization, in relation to the hydrogen station in the WE-NET second phase research, the laws related to handling of gaseous hydrogen, and the basic issues on facility and safe handling were studied. As for ISO/TC197, the following draft standards were examined: Fuel supply system interface for liquid hydrogen vehicles, fuel tank for liquid hydrogen vehicles, container for liquid hydrogen transport, specification of hydrogen fuel, hydrogen fuel supply facility for air ports, gaseous hydrogen and hydrogen mixture fuel system for vehicles, gaseous hydrogen fuel connector for vehicles, gaseous hydrogen fuel tank for vehicles, and basic items for hydrogen system safety. Final examination of the fuel supply system interface for liquid hydrogen vehicles, and the specification of hydrogen fuel was finished, and these are scheduled to be registered for ISO. (NEDO)

  10. The beach-seine and gill-net fisheries are South Africa's oldest ...

    African Journals Online (AJOL)

    spamer

    Portuguese fishermen during the 1860s (Thompson. 1913, Thom 1952). There were few management measures for the seine and gill-net fisheries until the latter half of this century. Then, as now, they were mostly implemented in an attempt to minimize conflict between net fishermen and other fishing sectors (De.

  11. Impact of protective shark nets on sea turtles in KwaZulu-Natal ...

    African Journals Online (AJOL)

    Few hawksbills Eretmochelys imbricata and olive ridleys Lepidochelys olivacea were caught in the shark nets. Fewer sea turtles are caught by shark nets than by longlines and because the nesting populations of loggerheads, green turtles and leatherbacks are either stable or increasing in the South-West Indian Ocean, ...

  12. Coloured Petri Nets: Basic Concepts, Analysis Methods and Practical Use. Vol. 3, Practical Use

    DEFF Research Database (Denmark)

    Jensen, Kurt

    system and related work. I have edited the material provided by the original authors. I have modified some of the CP-nets, e.g., to improve the layout and use more mnemonic names. In some cases, I have also changed a few net components, e.g., merged two transitions or introduced a Standard ML function...

  13. The proof of the pudding is in the eating: Net neutrality in practice, the Dutch example

    NARCIS (Netherlands)

    van Eijk, N.

    2014-01-01

    The Netherlands is among the few countries that have put specific net neutrality standards in place. It was the first country to do so in the European Union. Contrary to the original European Union approach, which lacks a material implementation of net neutrality principles, the Dutch parliament

  14. Grey Communities : A Scientometric Approach to Grey Literature, In and Outside of GreyNet

    OpenAIRE

    Prost, Hélène; Schöpfel, Joachim

    2014-01-01

    International audience; The paper explores grey communities outside the Grey Literature Network Service (GreyNet) and identifies potential members for GreyNet. GreyNet can be compared to a Learned Society or a special interest group specialised in grey literature as a particular field of library and information sciences (LIS). Its relevance is related to its capacity to enforce the terminology and definition of grey literature in LIS research and publications, and its impact and outreach can ...

  15. Petri Net Tool Overview 1986

    DEFF Research Database (Denmark)

    Jensen, Kurt; Feldbrugge, Frits

    1987-01-01

    This paper provides an overview of the characteristics of all currently available net based tools. It is a compilation of information provided by tool authors or contact persons. A concise one page overview is provided as well....

  16. Understanding Net Zero Energy Buildings

    DEFF Research Database (Denmark)

    Salom, Jaume; Widén, Joakim; Candanedo, José

    2011-01-01

    Although several alternative definitions exist, a Net-Zero Energy Building (Net ZEB) can be succinctly described as a grid-connected building that generates as much energy as it uses over a year. The “net-zero” balance is attained by applying energy conservation and efficiency measures...... and by incorporating renewable energy systems. While based on annual balances, a complete description of a Net ZEB requires examining the system at smaller time-scales. This assessment should address: (a) the relationship between power generation and building loads and (b) the resulting interaction with the power grid....... This paper presents and categorizes quantitative indicators suitable to describe both aspects of the building’s performance. These indicators, named LMGI - Load Matching and Grid Interaction indicators, are easily quantifiable and could complement the output variables of existing building simulation tools...

  17. PolicyNet Publication System

    Data.gov (United States)

    Social Security Administration — The PolicyNet Publication System project will merge the Oracle-based Policy Repository (POMS) and the SQL-Server CAMP system (MSOM) into a new system with an Oracle...

  18. KM3NeT

    CERN Multimedia

    KM3NeT is a large scale next-generation neutrino telescope located in the deep waters of the Mediterranean Sea, optimized for the discovery of galactic neutrino sources emitting in the TeV energy region.

  19. CERN on the net

    CERN Multimedia

    2008-01-01

    As all eyes turn to the LHC in the run-up to the big switch-on, online media are providing a keyhole into the deepest corners of CERN. From YouTube to blogs, communicating ideas has never before had the capacity to reach so many people. A wide range of websites comment on CERN.Blogs, YouTube, social networking, podcasting, Twitter, SecondLife, Flickr…. it’s easy to get lost in the ever expanding world of Web 2.0. But it’s also hard to ignore the fact that these web facilities are becoming a central part of everyday life, whether it’s for finding information, sharing interests with friends, keeping up to date with news, or simply for entertainment. CERN’s profile on these sites is also increasing, but as with everything on the Internet there is a huge range in the quality of information available, stretching from officially endorsed sites all the way to the plain ridiculous! This is our guide to some of the best CERN conte...

  20. Petri Nets in Cryptographic Protocols

    DEFF Research Database (Denmark)

    Crazzolara, Federico; Winskel, Glynn

    2001-01-01

    A process language for security protocols is presented together with a semantics in terms of sets of events. The denotation of process is a set of events, and as each event specifies a set of pre and postconditions, this denotation can be viewed as a Petri net. By means of an example we illustrate...... how the Petri-net semantics can be used to prove security properties....

  1. The Economics of Net Neutrality

    OpenAIRE

    Hahn, Robert W.; Wallsten, Scott

    2006-01-01

    This essay examines the economics of "net neutrality" and broadband Internet access. We argue that mandating net neutrality would be likely to reduce economic welfare. Instead, the government should focus on creating competition in the broadband market by liberalizing more spectrum and reducing entry barriers created by certain local regulations. In cases where a broadband provider can exercise market power the government should use its antitrust enforcement authority to police anticompetitiv...

  2. NetOglyc: prediction of mucin type O-glycosylation sites based on sequence context and surface accessibility

    DEFF Research Database (Denmark)

    Hansen, Jan Erik; Lund, Ole; Tolstrup, Niels

    1998-01-01

    . A jury of artifical neural networks was trained to recognize the sequence context and surface accessibility of 299 known and verified mucin type O-glycosylation sites extracted from O-GLYCBASE. The cross-validated NetOglyc network system correctly found 83% of the glycosylated and 90% of the non...... on the amino acid sequence. The server addresses are http://www.cbs.dtu.dk/services/NetOGlyc/ and netOglyc@cbs.dtu.dk...

  3. LTE HetNet Mobility Performance Through Emulation with Commercial Smartphones

    DEFF Research Database (Denmark)

    Jensen, Anders Riis; Pedersen, Klaus I.; Lauridsen, Mads

    2014-01-01

    In this paper we introduce a laboratory emulation setup for evaluation of Long Term Evolution (LTE) mobility performance in a co-channel heterogeneous network (HetNet). The setup consists of two eNodeB emulators, signal faders and release 9 LTE User Equipment (UE). It is shown how the LTE HetNet ...

  4. TAPAAL: Editor, Simulator and Verifier of Timed-Arc Petri Nets

    DEFF Research Database (Denmark)

    Byg, Joakim; Jørgensen, Kenneth Yrke; Srba, Jiri

    2009-01-01

    TAPAAL is a new platform independent tool for modelling, simulation and verification of timed-arc Petri nets. TAPAAL provides a stand-alone editor and simulator, while the verification module translates timed-arc Petri net models into networks of timed automata and uses the UPPAAL engine...

  5. Striving for Sustainable Development in Higher Education: ProSPER.Net Members Meet in Shanghai

    Science.gov (United States)

    Tabucanon, Mario T.; Tanaka, Aurea Christine; Aipanjiguly, Sampreethi

    2011-01-01

    To celebrate the two-year anniversary of the founding of ProSPER.Net--the Promotion of Sustainability in Postgraduate Education and Research Network--members convened on 5-9 July 2010 in Shanghai, China, at a meeting hosted by Tongji University, a founding member. ProSPER.Net is an alliance of 21 higher education institutions in the Asia-Pacific…

  6. The geographic diversity of nontuberculous mycobacteria isolated from pulmonary samples: an NTM-NET collaborative study

    NARCIS (Netherlands)

    Hoefsloot, W.; Ingen, J. van; Andrejak, C.; Angeby, K.; Bauriaud, R.; Bemer, P.; Beylis, N.; Boeree, M.J.; Cacho, J.; Chihota, V.; Chimara, E.; Churchyard, G.; Cias, R.; Daza, R.; Daley, C.L.; Dekhuijzen, P.N.R.; Domingo, D.; Drobniewski, F.; Esteban, J. De; Fauville-Dufaux, M.; Folkvardsen, D.B.; Gibbons, N.; Gomez-Mampaso, E.; Gonzalez, R.; Hoffmann, H.; Hsueh, P.R.; Indra, A.; Jagielski, T.; Jamieson, F.; Jankovic, M.; Jong, Eefje de; Keane, J.; Koh, W.J.; Lange, B. de; Leao, S.; Macedo, R.; Mannsaker, T.; Marras, T.K.; Maugein, J.; Milburn, H.J.; Mlinko, T.; Morcillo, N.; Morimoto, K.; Papaventsis, D.; Palenque, E.; Paez-Pena, M.; Piersimoni, C.; Polanova, M.; Rastogi, N.; Richter, E.; Ruiz-Serrano, M.J.; Silva, A.; Silva, M.P. da; Simsek, H.; Soolingen, D. van; Szabo, N.; Thomson, R.; Fernandez, T. Tortola; Tortoli, E.; Totten, S.E.; Tyrrell, G.; Vasankari, T.; Villar, M.; Walkiewicz, R.; Winthrop, K.L.; Wagner, D.; Trials, G. Nontuberculous

    2013-01-01

    A significant knowledge gap exists concerning the geographical distribution of nontuberculous mycobacteria (NTM) isolation worldwide. To provide a snapshot of NTM species distribution, global partners in the NTM-Network European Trials Group (NET) framework (www.ntm-net.org), a branch of the

  7. A Forward Reachability Algorithm for Bounded Timed-Arc Petri Nets

    DEFF Research Database (Denmark)

    David, Alexandre; Jacobsen, Lasse; Jacobsen, Morten

    2012-01-01

    Timed-arc Petri nets (TAPN) are a well-known time extension of thePetri net model and several translations to networks of timedautomata have been proposed for this model.We present a direct, DBM-basedalgorithm for forward reachability analysis of bounded TAPNs extended with transport arcs...

  8. 26 CFR 1.904(f)-3 - Allocation of net operating losses and net capital losses.

    Science.gov (United States)

    2010-04-01

    ... 26 Internal Revenue 9 2010-04-01 2010-04-01 false Allocation of net operating losses and net....904(f)-3 Allocation of net operating losses and net capital losses. For rules relating to the allocation of net operating losses and net capital losses, see § 1.904(g)-3T. ...

  9. 29 CFR 4204.13 - Net income and net tangible assets tests.

    Science.gov (United States)

    2010-07-01

    ... 29 Labor 9 2010-07-01 2010-07-01 false Net income and net tangible assets tests. 4204.13 Section....13 Net income and net tangible assets tests. (a) General. The criteria under this section are that either— (1) Net income test. The purchaser's average net income after taxes for its three most recent...

  10. Agent-based Social Simulation tools: Brahms and NetLogo

    OpenAIRE

    Sie, Rory

    2010-01-01

    Sie, R. L. L. (2010, 21 September). Agent-based Social Simulation tools: Brahms and NetLogo. Presentation at the Learning Networks Plenary, Heerlen, The Netherlands: Open University of the Netherlands.

  11. Constant-effort mist netting on the Lee Metcalf National Wildlife refuge, Montana 1993-1998

    Data.gov (United States)

    US Fish and Wildlife Service, Department of the Interior — In 1993, a constant-effort mist netting station (CEMN) was established on the Lee Metcalf National Wildlife Refuge as part of a network of monitoring stations for...

  12. RadNet Map Interface for Near-Real-Time Radiation Monitoring Data

    Data.gov (United States)

    U.S. Environmental Protection Agency — RadNet is a national network of monitoring stations that regularly collect air, precipitation, drinking water, and milk samples for analysis of radioactivity. The...

  13. Research and realization of info-net security controlling system

    Science.gov (United States)

    Xu, Tao; Zhang, Wei; Li, Xuhong; Wang, Xia; Pan, Wenwen

    2017-03-01

    The thesis introduces some relative concepts about Network Cybernetics, and we design and realize a new info-net security controlling system based on Network Cybernetics. The system can control the endpoints, safely save files, encrypt communication, supervise actions of users and show security conditions, in order to realize full-scale security management. At last, we simulate the functions of the system. The results show, the system can ensure the controllability of users and devices, and supervise them real-time. The system can maximize the security of the network and users.

  14. NetMOD Version 2.0 User?s Manual.

    Energy Technology Data Exchange (ETDEWEB)

    Merchant, Bion J. [Sandia National Lab. (SNL-NM), Albuquerque, NM (United States)

    2015-10-01

    NetMOD ( Net work M onitoring for O ptimal D etection) is a Java-based software package for conducting simulation of seismic, hydracoustic, and infrasonic networks. Specifically, NetMOD simulates the detection capabilities of monitoring networks. Network simulations have long been used to study network resilience to station outages and to determine where additional stations are needed to reduce monitoring thresholds. NetMOD makes use of geophysical models to determine the source characteristics, signal attenuation along the path between the source and station, and the performance and noise properties of the station. These geophysical models are combined to simulate the relative amplitudes of signal and noise that are observed at each of the stations. From these signal-to-noise ratios (SNR), the probability of detection can be computed given a detection threshold. This manual describes how to configure and operate NetMOD to perform detection simulations. In addition, NetMOD is distributed with simulation datasets for the Comprehensive Nuclear-Test-Ban Treaty Organization (CTBTO) International Monitoring System (IMS) seismic, hydroacoustic, and infrasonic networks for the purpose of demonstrating NetMOD's capabilities and providing user training. The tutorial sections of this manual use this dataset when describing how to perform the steps involved when running a simulation. ACKNOWLEDGEMENTS We would like to thank the reviewers of this document for their contributions.

  15. Continuous-time symmetric Hopfield nets are computationally universal.

    Science.gov (United States)

    Síma, Jirí; Orponen, Pekka

    2003-03-01

    We establish a fundamental result in the theory of computation by continuous-time dynamical systems by showing that systems corresponding to so-called continuous-time symmetric Hopfield nets are capable of general computation. As is well known, such networks have very constrained Lyapunov-function controlled dynamics. Nevertheless, we show that they are universal and efficient computational devices, in the sense that any convergent synchronous fully parallel computation by a recurrent network of n discrete-time binary neurons, with in general asymmetric coupling weights, can be simulated by a symmetric continuous-time Hopfield net containing only 18n + 7 units employing the saturated-linear activation function. Moreover, if the asymmetric network has maximum integer weight size w(max) and converges in discrete time t*, then the corresponding Hopfield net can be designed to operate in continuous time Theta(t*/epsilon) for any epsilon > 0 such that w(max)2(12n) computation models, our result implies that any polynomially space-bounded Turing machine can be simulated by a family of polynomial-size continuous-time symmetric Hopfield nets.

  16. Squaroglitter: A 3,4-Connected Carbon Net

    KAUST Repository

    Prasad, Dasari L. V. K.

    2013-08-13

    Theoretical calculations are presented on a new hypothetical 3,4-connected carbon net (called squaroglitter) incorporating 1,4 cyclohexadiene units. The structure has tetragonal space group P4/mmm (No. 123) symmetry. The optimized geometry shows normal distances, except for some elongated bonds in the cyclobutane ring substructures in the network. Squaroglitter has an indirect bandgap of about 1.0 eV. The hypothetical lattice, whose density is close to graphite, is more stable than other 3,4-connected carbon nets. A relationship to a (4,4)nanotube is explored, as is a potential threading of the lattice with metal needles. © 2013 American Chemical Society.

  17. Agent-based computational economics using NetLogo

    CERN Document Server

    Damaceanu, Romulus-Catalin

    2013-01-01

    Agent-based Computational Economics using NetLogo explores how researchers can create, use and implement multi-agent computational models in Economics by using NetLogo software platform. Problems of economic science can be solved using multi-agent modelling (MAM). This technique uses a computer model to simulate the actions and interactions of autonomous entities in a network, in order to analyze the effects on the entire economic system. MAM combines elements of game theory, complex systems, emergence and evolutionary programming. The Monte Carlo method is also used in this e-book to introduc

  18. The Formal Semantics of Core ABS and ABS-NET

    OpenAIRE

    Palmskog, Karl

    2013-01-01

    ABS is a language and framework for modelling distributed object-oriented systems, developed in the EU FP7 HATS project. Core ABS formalizes the key parts of ABS, including the syntax, type system, and an operational semantics in the style of rewriting logic. ABS-NET is a novel operational semantics for Core ABS programs, developed as a part of work on decentralized runtime adaptation of distributed objects. ABS-NET describes program execution on top of a network of nodes connected point-to-p...

  19. SpectralNET – an application for spectral graph analysis and visualization

    Directory of Open Access Journals (Sweden)

    Schreiber Stuart L

    2005-10-01

    Full Text Available Abstract Background Graph theory provides a computational framework for modeling a variety of datasets including those emerging from genomics, proteomics, and chemical genetics. Networks of genes, proteins, small molecules, or other objects of study can be represented as graphs of nodes (vertices and interactions (edges that can carry different weights. SpectralNET is a flexible application for analyzing and visualizing these biological and chemical networks. Results Available both as a standalone .NET executable and as an ASP.NET web application, SpectralNET was designed specifically with the analysis of graph-theoretic metrics in mind, a computational task not easily accessible using currently available applications. Users can choose either to upload a network for analysis using a variety of input formats, or to have SpectralNET generate an idealized random network for comparison to a real-world dataset. Whichever graph-generation method is used, SpectralNET displays detailed information about each connected component of the graph, including graphs of degree distribution, clustering coefficient by degree, and average distance by degree. In addition, extensive information about the selected vertex is shown, including degree, clustering coefficient, various distance metrics, and the corresponding components of the adjacency, Laplacian, and normalized Laplacian eigenvectors. SpectralNET also displays several graph visualizations, including a linear dimensionality reduction for uploaded datasets (Principal Components Analysis and a non-linear dimensionality reduction that provides an elegant view of global graph structure (Laplacian eigenvectors. Conclusion SpectralNET provides an easily accessible means of analyzing graph-theoretic metrics for data modeling and dimensionality reduction. SpectralNET is publicly available as both a .NET application and an ASP.NET web application from http://chembank.broad.harvard.edu/resources/. Source code is

  20. SpectralNET--an application for spectral graph analysis and visualization.

    Science.gov (United States)

    Forman, Joshua J; Clemons, Paul A; Schreiber, Stuart L; Haggarty, Stephen J

    2005-10-19

    Graph theory provides a computational framework for modeling a variety of datasets including those emerging from genomics, proteomics, and chemical genetics. Networks of genes, proteins, small molecules, or other objects of study can be represented as graphs of nodes (vertices) and interactions (edges) that can carry different weights. SpectralNET is a flexible application for analyzing and visualizing these biological and chemical networks. Available both as a standalone .NET executable and as an ASP.NET web application, SpectralNET was designed specifically with the analysis of graph-theoretic metrics in mind, a computational task not easily accessible using currently available applications. Users can choose either to upload a network for analysis using a variety of input formats, or to have SpectralNET generate an idealized random network for comparison to a real-world dataset. Whichever graph-generation method is used, SpectralNET displays detailed information about each connected component of the graph, including graphs of degree distribution, clustering coefficient by degree, and average distance by degree. In addition, extensive information about the selected vertex is shown, including degree, clustering coefficient, various distance metrics, and the corresponding components of the adjacency, Laplacian, and normalized Laplacian eigenvectors. SpectralNET also displays several graph visualizations, including a linear dimensionality reduction for uploaded datasets (Principal Components Analysis) and a non-linear dimensionality reduction that provides an elegant view of global graph structure (Laplacian eigenvectors). SpectralNET provides an easily accessible means of analyzing graph-theoretic metrics for data modeling and dimensionality reduction. SpectralNET is publicly available as both a .NET application and an ASP.NET web application from http://chembank.broad.harvard.edu/resources/. Source code is available upon request.

  1. Enterpreneurial network

    OpenAIRE

    Thoma, Antonela; Nguyen, Lien; Kupsyte, Valdone

    2014-01-01

    Network has become more and more indispensable in the entrepreneurial world. Especially in startup businesses, network is crucial for new entrepreneurs. This project looks at how entrepreneurs in different sectors use network to become successful. We chose to work with three entrepreneurs from three companies that have been operational for a few years and conducted face to face interviews with them. Through the data from the interviews, we analyzed firstly what type of entrepreneurs they are,...

  2. NetMOD version 1.0 user's manual

    Energy Technology Data Exchange (ETDEWEB)

    Merchant, Bion John [Sandia National Lab. (SNL-NM), Albuquerque, NM (United States)

    2014-01-01

    NetMOD (Network Monitoring for Optimal Detection) is a Java-based software package for conducting simulation of seismic networks. Specifically, NetMOD simulates the detection capabilities of seismic monitoring networks. Network simulations have long been used to study network resilience to station outages and to determine where additional stations are needed to reduce monitoring thresholds. NetMOD makes use of geophysical models to determine the source characteristics, signal attenuation along the path between the source and station, and the performance and noise properties of the station. These geophysical models are combined to simulate the relative amplitudes of signal and noise that are observed at each of the stations. From these signal-to-noise ratios (SNR), the probability of detection can be computed given a detection threshold. This manual describes how to configure and operate NetMOD to perform seismic detection simulations. In addition, NetMOD is distributed with a simulation dataset for the Comprehensive Nuclear-Test-Ban Treaty Organization (CTBTO) International Monitoring System (IMS) seismic network for the purpose of demonstrating NetMOD's capabilities and providing user training. The tutorial sections of this manual use this dataset when describing how to perform the steps involved when running a simulation.

  3. Career planning and mentorship: a few key considerations for trainees

    Directory of Open Access Journals (Sweden)

    Badawy SM

    2017-10-01

    Full Text Available Sherif M Badawy1–3 1Division of Hematology, Oncology and Stem Cell Transplant, Ann & Robert H. Lurie Children’s Hospital of Chicago, Chicago, IL, USA; 2Department of Pediatrics, Northwestern University Feinberg School of Medicine, Chicago, IL, USA; 3Department of Pediatrics, Division of Hematology and Oncology, Zagazig University Faculty of Medicine, Zagazig, Egypt Abstract: Publishing and securing funding are considered our “academic currency”, and therefore, both should be emphasized during training, both residency and fellowship. Trainees should make an effort to find funding opportunities at or outside of their institutions and try to identify their short- and long-term goals. Establishing a track record of publications can help trainees get hired, funded, and promoted as junior faculty, and effective networking and mentorship are critical determinants of academic success. Given the positive effects of mentorship, trainees should understand what comprises a good mentor–mentee relationship and how to optimize the mentoring process. The objective of this article is to discuss few key considerations for trainees in residency or fellowship regarding mentorship and career planning in academic medicine. Keywords: career planning, career development, mentorship, training, fellowship, residency 

  4. TimeNET Optimization Environment

    Directory of Open Access Journals (Sweden)

    Christoph Bodenstein

    2015-12-01

    Full Text Available In this paper a novel tool for simulation-based optimization and design-space exploration of Stochastic Colored Petri nets (SCPN is introduced. The working title of this tool is TimeNET Optimization Environment (TOE. Targeted users of this tool are people modeling complex systems with SCPNs in TimeNET who want to find parameter sets that are optimal for a certain performance measure (fitness function. It allows users to create and simulate sets of SCPNs and to run different optimization algorithms based on parameter variation. The development of this tool was motivated by the need to automate and speed up tests of heuristic optimization algorithms to be applied for SCPN optimization. A result caching mechanism is used to avoid recalculations.

  5. NetPhosBac - A predictor for Ser/Thr phosphorylation sites in bacterial proteins

    DEFF Research Database (Denmark)

    Miller, Martin Lee; Soufi, Boumediene; Jers, Carsten

    2009-01-01

    predictors on bacterial systems. We used these large bacterial datasets and neural network algorithms to create the first bacteria-specific protein phosphorylation predictor: NetPhosBac. With respect to predicting bacterial phosphorylation sites, NetPhosBac significantly outperformed all benchmark predictors....... Moreover, NetPhosBac predictions of phosphorylation sites in E. coli proteins were experimentally verified on protein and site-specific levels. In conclusion, NetPhosBac clearly illustrates the advantage of taxa-specific predictors and we hope it will provide a useful asset to the microbiological community....

  6. Net Neutrality in Canada and what it means for libraries

    Directory of Open Access Journals (Sweden)

    Alex Guindon

    2010-06-01

    Full Text Available Net Neutrality, the idea that the Internet should be provided to all without discrimination based on content or applications, has been an important policy issue in the last few years. A lack of net neutrality could negatively impact libraries, intellectual freedom, cultural diversity, and the right to privacy. This paper looks at the issues that underline the net neutrality debate and describes how they are shaped by the different actors that are concerned with the future of the Internet. Technological issues, such as traffic shaping by Internet Service Providers, and legal issues in the context of Canada’s Telecommunications Act, are also addressed. Finally, the paper reviews the recent CRTC policy on Internet Traffic Management Practices.

  7. Net4Care PHMR Library

    DEFF Research Database (Denmark)

    2014-01-01

    The Net4Care PHMR library contains a) A GreenCDA approach for constructing a data object representing a PHMR document: SimpleClinicalDocument, and b) A Builder which can produce a XML document representing a valid Danish PHMR (following the MedCom profile) document from the SimpleClinicalDocument......The Net4Care PHMR library contains a) A GreenCDA approach for constructing a data object representing a PHMR document: SimpleClinicalDocument, and b) A Builder which can produce a XML document representing a valid Danish PHMR (following the MedCom profile) document from the Simple...

  8. Pro DLR in NET 4

    CERN Document Server

    Wu, Chaur

    2011-01-01

    Microsoft's Dynamic Language Runtime (DLR) is a platform for running dynamic languages such as Ruby and Python on an equal footing with compiled languages such as C#. Furthermore, the runtime is the foundation for many useful software design and architecture techniques you can apply as you develop your .NET applications. Pro DLR in .NET 4 introduces you to the DLR, showing how you can use it to write software that combines dynamic and static languages, letting you choose the right tool for the job. You will learn the core DLR components such as LINQ expressions, call sites, binders, and dynami

  9. Hierarchies in Coloured Petri Nets

    DEFF Research Database (Denmark)

    Huber, Peter; Jensen, Kurt; Shapiro, Robert M.

    1991-01-01

    The paper shows how to extend Coloured Petri Nets with a hierarchy concept. The paper proposes five different hierarchy constructs, which allow the analyst to structure large CP-nets as a set of interrelated subnets (called pages). The paper discusses the properties of the proposed hierarchy...... constructs, and it illustrates them by means of two examples. The hierarchy constructs can be used for theoretical considerations, but their main use is to describe and analyse large real-world systems. All of the hierarchy constructs are supported by the editing and analysis facilities in the CPN Palette...

  10. OK-Net Arable online knowledge platform

    DEFF Research Database (Denmark)

    Rasmussen, Ilse Ankjær; Jensen, Allan Leck; Jørgensen, Margit Styrbæk

    2017-01-01

    The complexity of organic farming requires farmers to have a very high level of knowledge and skills, but exchange on organic farming management techniques remains limited. The thematic network OK-Net Arable under Horizon 2020 has the aim to improve the exchange of innovative and traditional...... knowledge among farmers, farm advisers and scientists to increase productivity and quality in organic arable cropping in Europe. An online platform for knowledge exchange has been created, offering innovative education and end-user material as well as communication opportunities between actors. A number...... of specific tools – providing information about how to put existing knowledge from research and practice into use – have been chosen. They are presented on the platform with the possibility to find solutions, evaluate them, comment and discuss them or ask questions about them and to suggest new tools...

  11. Beyond Pattern Recognition With Neural Nets

    Science.gov (United States)

    Arsenault, Henri H.; Macukow, Bohdan

    1989-02-01

    Neural networks are finding many areas of application. Although they are particularly well-suited for applications related to associative recall such as content-addressable memories, neural nets can perform many other applications ranging from logic operations to the solution of optimization problems. The training of a recently introduced model to perform boolean logical operations such as XOR is described. Such simple systems can be combined to perform any complex boolean operation. Any complex task consisting of parallel and serial operations including fuzzy logic that can be described in terms of input-output relations can be accomplished by combining modules such as the ones described here. The fact that some modules can carry out their functions even when their inputs contain erroneous data, and the fact that each module can carry out its functions in parallel with itself and other modules promises some interesting applications.

  12. Net smart how to thrive online

    CERN Document Server

    Rheingold, Howard

    2014-01-01

    Like it or not, knowing how to make use of online tools without being overloaded with too much information is an essential ingredient to personal success in the twenty-first century. But how can we use digital media so that they make us empowered participants rather than passive receivers, grounded, well-rounded people rather than multitasking basket cases? In Net Smart, cyberculture expert Howard Rheingold shows us how to use social media intelligently, humanely, and, above all, mindfully. Mindful use of digital media means thinking about what we are doing, cultivating an ongoing inner inquiry into how we want to spend our time. Rheingold outlines five fundamental digital literacies, online skills that will help us do this: attention, participation, collaboration, critical consumption of information (or "crap detection"), and network smarts. He explains how attention works, and how we can use our attention to focus on the tiny relevant portion of the incoming tsunami of information. He describes the quality...

  13. Detekce provozu Skype pomocí dat NetFlow

    OpenAIRE

    Šebeň, Patrik

    2012-01-01

    NetFlow je sieťový protokol bežne používaný k zberu informácií o IP tokoch. Avšak existuje možnosť, ako použiť tieto zachytené dáta k identifikácií klientov v Skype komunikácií. Táto práca pojednáva o identifikácií určitých vzorov v Skype protokole a ich detekcií v NetFlow dátach. Týmto spôsobom sme schopný identifikovať nódy a supernódy v sieti Skype. NetFlow is a network protocol commonly used for collectiong IP traffic information. But there is a way to use this collected data for inden...

  14. AGU Joins MentorNet to Support Young Geoscientists

    Science.gov (United States)

    Cifuentes, Inés

    2009-11-01

    AGU has joined MentorNet as a partner in a mentoring network that encourages diversity in the engineering and science professions. MentorNet matches protégés and mentors and provides mentoring advice, suggestions, and gentle reminders to keep the exchange going. This partnership makes it possible for AGU to connect student members who would like a mentor in the geosciences with members who want to mentor. Mentoring is key to encouraging young people—particularly women, Latinos, and African Americans—to become involved and stay involved with the sciences. MentorNet partners with institutions of higher education, industry, government, and professional societies to provide online programs to serve science professionals and students.

  15. Mobile Opportunistic Services for Experience Sharing : Via a NetInf Android Application

    OpenAIRE

    Moradinia, Pourya; Sakhi, Imal

    2014-01-01

    Information-Centric Networking (ICN) is a new research area concerning creating a new network architecture that would be more suitable for both current and the future's network. The MOSES (Mobile Opportunistic Services for Experience Sharing) project is part of this development. The project works with the development and demonstration of the Network of Information (NetInf) protocol, which is an implementation of the ICN concept. This Master’s thesis project is part of the MOSES project and ai...

  16. D.NET case study

    International Development Research Centre (IDRC) Digital Library (Canada)

    lremy

    developing products, marketing tools and building capacity of the grass root telecentre workers. D.Net recognized that it had several ideas worth developing into small interventions that would make big differences, but resource constraints were a barrier for scaling-up these initiatives. More demands, limited resources.

  17. Surgery for GEP-NETs

    DEFF Research Database (Denmark)

    Knigge, Ulrich; Hansen, Carsten Palnæs

    2012-01-01

    Surgery is the only treatment that may cure the patient with gastroentero-pancreatic (GEP) neuroendocrine tumours (NET) and neuroendocrine carcinomas (NEC) and should always be considered as first line treatment if R0/R1 resection can be achieved. The surgical and interventional procedures for GEP...

  18. Net Neutrality in the Netherlands

    NARCIS (Netherlands)

    van Eijk, N.

    2014-01-01

    The Netherlands is among the first countries that have put specific net neutrality standards in place. The decision to implement specific regulation was influenced by at least three factors. The first was the prevailing social and academic debate, partly due to developments in the United States. The

  19. Complexity Metrics for Workflow Nets

    DEFF Research Database (Denmark)

    Lassen, Kristian Bisgaard; van der Aalst, Wil M.P.

    2009-01-01

    Process modeling languages such as EPCs, BPMN, flow charts, UML activity diagrams, Petri nets, etc.\\ are used to model business processes and to configure process-aware information systems. It is known that users have problems understanding these diagrams. In fact, even process engineers and system...

  20. Substance Abuse Treatment Stage and Personal Networks of Women in Substance Abuse Treatment

    Science.gov (United States)

    Tracy, Elizabeth M.; Kim, HyunSoo; Brown, Suzanne; Min, Meeyoung O.; Jun, Min Kyoung; McCarty, Christopher

    2012-01-01

    This study examines the relationship among 4 treatment stages (i.e., engagement, persuasion, active treatment, relapse prevention) and the composition, social support, and structural characteristics of personal networks. The study sample includes 242 women diagnosed with substance dependence who were interviewed within their first month of intensive outpatient treatment. Using EgoNet software, the women reported on their 25 alter personal networks and the characteristics of each alter. With one exception, few differences were found in the network compositions at different stages of substance abuse treatment. The exception was the network composition of women in the active treatment stage, which included more network members from treatment programs or 12-Step meetings. Although neither the type nor amount of social support differed across treatment stages, reciprocity differed between women in active treatment and those in the engagement stage. Networks of women in active treatment were less connected, as indicated by a higher number of components, whereas networks of women in the persuasion stage had a higher degree of centralization, as indicated by networks dominated by people with the most ties. Overall, we find social network structural variables to relate to the stage of treatment, whereas network composition, type of social support, and sociodemographic variables (with a few exceptions) do not relate to treatment stage. Results suggest that social context, particularly how social contacts are arranged around clients, should be incorporated into treatment programs, regardless of demographic background. PMID:22639705

  1. On the reliability of the nervous (Nv) nets

    Energy Technology Data Exchange (ETDEWEB)

    Beiu, V.; Frigo, J.R.; Moore, K.R.

    1998-12-31

    This paper investigates the reliability of a particular class of neural networks, the Nervous Nets (Nv). This is the class of nonsymmetric ring oscillator networks of inverters coupled through variable delays. They have been successfully applied to controlling walking robots, while many other applications will shortly be mentioned. The authors will then explain the robustness of Nv nets in the sense of their highly reliable functioning--which has been observed through many experiments. For doing that the authors will show that although the Nv net has an exponential number of periodic points, only a small (still exponential) part are stable, while all the others are saddle points. The ratio between the number of stable and periodic points quickly vanishes to zero as the number of nodes is increased, as opposed to classical finite state machines--where this ratio is relatively constant. These show that the Nv net will always converge quickly to a stable oscillatory state--a fact not true in general for finite state machines.

  2. SkyGlowNet as a Vehicle for STEM Education

    Science.gov (United States)

    Flurchick, K. M.; Craine, E. R.; Culver, R. B.; Deal, S.; Foster, C.

    2013-06-01

    SkyGlowNet is an emerging network of internet-enabled sky brightness meters (iSBM) that continuously record and log sky brightness at the zenith of each network node site. Also logged are time and weather information. These data are polled at a user-defined frequency, typically about every 45 seconds. The data are uploaded to the SkyGlowNet website, initially to a proprietary area where the data for each institution are embargoed for one or two semesters as students conduct research projects with their data. When released from embargo, the data are moved to another area where they can be accessed by all SkyGlowNet participants. Some of the data are periodically released to a public area on the website. In this presentation we describe the data formats and provide examples of both data content and the structure of the website. Early data from two nodes in the SkyGlowNet have been characterized, both quantitatively and qualitatively, by undergraduate students at NCAT. A summary of their work is presented here. These analyses are of utility in helping those new to looking at these data to understand how to interpret them. In particular, we demonstrate differences between effects on light at night and sky brightness due to astronomical cycles, atmospheric phenomena, and artificial lighting. Quantitative characterization of the data includes statistical analyses of parsed segments of the temporal data stream. An attempt is made to relate statistical metrics to specific types of phenomena.

  3. Caught in the Net: Perineuronal Nets and Addiction

    Directory of Open Access Journals (Sweden)

    Megan Slaker

    2016-01-01

    Full Text Available Exposure to drugs of abuse induces plasticity in the brain and creates persistent drug-related memories. These changes in plasticity and persistent drug memories are believed to produce aberrant motivation and reinforcement contributing to addiction. Most studies have explored the effect drugs of abuse have on pre- and postsynaptic cells and astrocytes; however, more recently, attention has shifted to explore the effect these drugs have on the extracellular matrix (ECM. Within the ECM are unique structures arranged in a net-like manner, surrounding a subset of neurons called perineuronal nets (PNNs. This review focuses on drug-induced changes in PNNs, the molecules that regulate PNNs, and the expression of PNNs within brain circuitry mediating motivation, reward, and reinforcement as it pertains to addiction.

  4. Army Net Zero Prove Out. Army Net Zero Training Report

    Science.gov (United States)

    2014-11-20

    sensors were strategically placed throughout the installation by magnetically attaching them to water main valve stems. The sensors check sound...Recycle Wrap  Substitutes for Packaging Materials  Re-Use of Textiles and Linens  Setting Printers to Double-Sided Printing Net Zero Waste...can effectively achieve source reduction. Clean and Re-Use Shop Rags - Shop rags represent a large textile waste stream at many installations. As a

  5. Army Net Zero Prove Out. Net Zero Waste Best Practices

    Science.gov (United States)

    2014-11-20

    Anaerobic Digesters – Although anaerobic digestion is not a new technology and has been used on a large-scale basis in wastewater treatment , the...technology and has been used on a large-scale basis in wastewater treatment , the use of the technology should be demonstrated with other...approaches can be used for cardboard and cellulose -based packaging materials. This approach is in line with the Net Zero Waste hierarchy in terms of

  6. Particle Tracking and Simulation on the .NET Framework

    Energy Technology Data Exchange (ETDEWEB)

    Nishimura, Hiroshi; Scarvie, Tom

    2006-06-19

    Particle tracking and simulation studies are becoming increasingly complex. In addition to the use of more sophisticated graphics, interactive scripting is becoming popular. Compatibility with different control systems requires network and database capabilities. It is not a trivial task to fulfill all the various requirements without sacrificing runtime performance. We evaluated the effectiveness of the .NET framework by converting a C++ simulation code to C. The portability to other platforms is mentioned in terms of Mono.

  7. Optical neural net for classifying imaging spectrometer data

    Science.gov (United States)

    Barnard, Etienne; Casasent, David P.

    1989-01-01

    The problem of determining the composition of an unknown input mixture from its measured spectrum, given the spectra of a number of elements, is studied. The Hopfield minimization procedure was used to express the determination of the compositions as a problem suitable for solution by neural nets. A mathematical description of the problem was developed and used as a basis for a neural network solution and an optical implementation.

  8. HANPP Collection: Human Appropriation of Net Primary Productivity as a Percentage of Net Primary Productivity

    Data.gov (United States)

    National Aeronautics and Space Administration — The Human Appropriation of Net Primary Productivity (HANPP) as a Percentage of Net Primary Productivity (NPP) portion of the Human Appropriation of Net Primary...

  9. Hydrodynamic characteristics of plane netting used for aquaculture net cages in uniform current

    National Research Council Canada - National Science Library

    DONG, SHUCHUANG; HU, FUXIANG; KUMAZAWA, TAISEI; SIODE, DAISUKE; TOKAI, TADASHI

    2016-01-01

      The hydrodynamic characteristics of polyethylene (PE) netting and chain link wire netting with different types of twine diameter and mesh size for aquaculture net cages were examined by experiments in a flume tank...

  10. Isolated unit tests in .Net

    OpenAIRE

    Haukilehto, Tero

    2013-01-01

    In this thesis isolation in unit testing is studied to get a precise picture of the isolation frameworks available for .Net environment. At the beginning testing is discussed in theory with the benefits and the problems it may have been linked with. The theory includes software development in general in connection with testing. Theory of isolation is also described before the actual isolation frameworks are represented. Common frameworks are described in more detail and comparable informa...

  11. METHOD OF DISPLAYING AN EXECUTABLE BUSINESS PROCESS MODELS INTO PETRI NETS

    Directory of Open Access Journals (Sweden)

    Igor G. Fedorov

    2013-01-01

    Full Text Available Executable business process models, as well as programs, require evidence of a defect-free finish. The methods based on the formalism of Petri nets are widely used. A business process is a network of dishes, and its properties are set by the analysis of the properties of the network. The aim is to study the methods of displaying an executable business process model in a Petri net. Analysis of the properties of the resulting model allows us to prove a number of important properties: it is a network of free choice and clean without looping.

  12. Vulnerability of network of networks

    Science.gov (United States)

    Havlin, S.; Kenett, D. Y.; Bashan, A.; Gao, J.; Stanley, H. E.

    2014-10-01

    Our dependence on networks - be they infrastructure, economic, social or others - leaves us prone to crises caused by the vulnerabilities of these networks. There is a great need to develop new methods to protect infrastructure networks and prevent cascade of failures (especially in cases of coupled networks). Terrorist attacks on transportation networks have traumatized modern societies. With a single blast, it has become possible to paralyze airline traffic, electric power supply, ground transportation or Internet communication. How, and at which cost can one restructure the network such that it will become more robust against malicious attacks? The gradual increase in attacks on the networks society depends on - Internet, mobile phone, transportation, air travel, banking, etc. - emphasize the need to develop new strategies to protect and defend these crucial networks of communication and infrastructure networks. One example is the threat of liquid explosives a few years ago, which completely shut down air travel for days, and has created extreme changes in regulations. Such threats and dangers warrant the need for new tools and strategies to defend critical infrastructure. In this paper we review recent advances in the theoretical understanding of the vulnerabilities of interdependent networks with and without spatial embedding, attack strategies and their affect on such networks of networks as well as recently developed strategies to optimize and repair failures caused by such attacks.

  13. Event hierarchies in DanNet

    DEFF Research Database (Denmark)

    Pedersen, Bolette Sandford; Nimb, Sanni

    2008-01-01

    Artiklen omhandler udarbejdelsen af et verbumshierarki i det leksikalsk-semantiske ordnet, DanNet.......Artiklen omhandler udarbejdelsen af et verbumshierarki i det leksikalsk-semantiske ordnet, DanNet....

  14. The Uniframe .Net Web Service Discovery Service

    National Research Council Canada - National Science Library

    Berbeco, Robert W

    2003-01-01

    Microsoft .NET allows the creation of distributed systems in a seamless manner Within NET small, discrete applications, referred to as Web services, are utilized to connect to each other or larger applications...

  15. Long Term RadNet Quality Data

    Data.gov (United States)

    U.S. Environmental Protection Agency — This RadNet Quality Data Asset includes all data since initiation and when ERAMS was expanded to become RadNet, name changed to reflect new mission. This includes...

  16. Accelerated augmented Lagrangian method for few-view CT reconstruction

    Science.gov (United States)

    Wu, Junfeng; Mou, Xuanqin

    2012-03-01

    Recently iterative reconstruction algorithms with total variation (TV) regularization have shown its tremendous power in image reconstruction from few-view projection data, but it is much more demanding in computation. In this paper, we propose an accelerated augmented Lagrangian method (ALM) for few-view CT reconstruction with total variation regularization. Experimental phantom results demonstrate that the proposed method not only reconstruct high quality image from few-view projection data but also converge fast to the optimal solution.

  17. PsychoNet: a psycholinguistc commonsense ontology

    OpenAIRE

    Mohtasseb, Haytham; Ahmed, Amr

    2010-01-01

    Ontologies have been widely accepted as the most advanced knowledge representation model. This paper introduces PsychoNet, a new knowledgebase that forms the link between psycholinguistic taxonomy, existing in LIWC, and its semantic textual representation in the form of commonsense semantic ontology, represented by ConceptNet. The integration of LIWC and ConceptNet and the added functionalities facilitate employing ConceptNet in psycholinguistic studies. Furthermore, it simplifies utilization...

  18. Fourth international conference on Networks & Communications

    CERN Document Server

    Meghanathan, Natarajan; Nagamalai, Dhinaharan; Computer Networks & Communications (NetCom)

    2013-01-01

    Computer Networks & Communications (NetCom) is the proceedings from the Fourth International Conference on Networks & Communications. This book covers theory, methodology and applications of computer networks, network protocols and wireless networks, data communication technologies, and network security. The proceedings will feature peer-reviewed papers that illustrate research results, projects, surveys and industrial experiences that describe significant advances in the diverse areas of computer networks & communications.

  19. 78 FR 72451 - Net Investment Income Tax

    Science.gov (United States)

    2013-12-02

    ... Revenue Service 26 CFR Part 1 RIN 1545-BL74 Net Investment Income Tax AGENCY: Internal Revenue Service...). These regulations provide guidance on the computation of net investment income. The regulations affect... lesser of: (A) The individual's net investment income for such taxable year, or (B) the excess (if any...

  20. 47 CFR 69.302 - Net investment.

    Science.gov (United States)

    2010-10-01

    ... 47 Telecommunication 3 2010-10-01 2010-10-01 false Net investment. 69.302 Section 69.302... Apportionment of Net Investment § 69.302 Net investment. (a) Investment in Accounts 2001, 1220 and Class B Rural...) Investment in Accounts 2002, 2003 and to the extent such inclusions are allowed by this Commission, Account...

  1. 47 CFR 65.450 - Net income.

    Science.gov (United States)

    2010-10-01

    ... 47 Telecommunication 3 2010-10-01 2010-10-01 false Net income. 65.450 Section 65.450... OF RETURN PRESCRIPTION PROCEDURES AND METHODOLOGIES Exchange Carriers § 65.450 Net income. (a) Net income shall consist of all revenues derived from the provision of interstate telecommunications services...

  2. 47 CFR 65.500 - Net income.

    Science.gov (United States)

    2010-10-01

    ... 47 Telecommunication 3 2010-10-01 2010-10-01 false Net income. 65.500 Section 65.500... OF RETURN PRESCRIPTION PROCEDURES AND METHODOLOGIES Interexchange Carriers § 65.500 Net income. The net income methodology specified in § 65.450 shall be utilized by all interexchange carriers that are...

  3. NetBeans IDE 8 cookbook

    CERN Document Server

    Salter, David

    2014-01-01

    If you're a Java developer of any level using NetBeans and want to learn how to get the most out of NetBeans, then this book is for you. Learning how to utilize NetBeans will provide a firm foundation for your Java application development.

  4. Characterizing behavioural congruences for Petri nets

    DEFF Research Database (Denmark)

    Nielsen, Mogens; Priese, Lutz; Sassone, Vladimiro

    1995-01-01

    We exploit a notion of interface for Petri nets in order to design a set of net combinators. For such a calculus of nets, we focus on the behavioural congruences arising from four simple notions of behaviour, viz., traces, maximal traces, step, and maximal step traces, and from the corresponding...

  5. 27 CFR 4.37 - Net contents.

    Science.gov (United States)

    2010-04-01

    ... the volume of wine within the container, except that the following tolerances shall be allowed: (1... THE TREASURY LIQUORS LABELING AND ADVERTISING OF WINE Labeling Requirements for Wine § 4.37 Net contents. (a) Statement of net contents. The net contents of wine for which a standard of fill is...

  6. Learning Networks for Lifelong Learning

    NARCIS (Netherlands)

    Koper, Rob

    2004-01-01

    Presentation at: "Learning Designs in a Networked World A Dutch - Canada Education Seminar", October 15th, 2004, University of Alberta, Edmonton, Canada. Similar presentation as: net/1820/278">http://hdl.handle.net/1820/278

  7. Beyond Fine Tuning: Adding capacity to leverage few labels

    Energy Technology Data Exchange (ETDEWEB)

    Hodas, Nathan O.; Shaffer, Kyle J.; Yankov, Artem; Corley, Courtney D.; Anderson, Aryk L.

    2017-12-09

    In this paper we present a technique to train neural network models on small amounts of data. Current methods for training neural networks on small amounts of rich data typically rely on strategies such as fine-tuning a pre-trained neural networks or the use of domain-specific hand-engineered features. Here we take the approach of treating network layers, or entire networks, as modules and combine pre-trained modules with untrained modules, to learn the shift in distributions between data sets. The central impact of using a modular approach comes from adding new representations to a network, as opposed to replacing representations via fine-tuning. Using this technique, we are able surpass results using standard fine-tuning transfer learning approaches, and we are also able to significantly increase performance over such approaches when using smaller amounts of data.

  8. Determinants of household demand for bed nets in a rural area of southern Mozambique

    Directory of Open Access Journals (Sweden)

    Nhacolo Ariel

    2009-06-01

    Full Text Available Abstract Background A key to making insecticide-treated nets (ITNs a long-term, sustainable solution to the spread of malaria is understanding what drives their purchase and use. Few studies have analysed the determinants of demand for bed nets for malaria prevention at the household level, and in particular, how demand for nets compares with demand for other mosquito prevention methods. Methods This study uses a household survey to assess the determinants of demand for bed nets in an area of endemic malaria transmission in rural, southern Mozambique. The study looks at willingness to pay (WTP for bed nets, net ownership, usage, and past purchase behaviour, alongside expenditure and frequency of use of alternate methods for malaria prevention. Results While overall net ownership in the sample is low, the evidence fails to suggest that poorer households are less likely to own bed nets, when controlling for covariates, nor does the likelihood of receiving a free net depend on socioeconomic status (SES. Formal schooling and market knowledge seem to indicate higher average willingness to pay, while use of alternate methods for malaria prevention, and receipt of Indoor Residual Spraying (IRS are found to decrease demand for bed nets. Conclusion For long-term sustainability of ITNs to be realized, results suggest that either full or partial subsidies may be necessary in some contexts to encourage households to obtain and use nets. Given the possible substitution effects of combined malaria control interventions, and the danger of not taking into consideration household preferences for malaria prevention, successful malaria control campaigns should invest a portion of their funds towards educating recipients of IRS and users of other preventive methods on the importance of net use even in the absence of mosquitoes.

  9. NET 40 Generics Beginner's Guide

    CERN Document Server

    Mukherjee, Sudipta

    2012-01-01

    This is a concise, practical guide that will help you learn Generics in .NET, with lots of real world and fun-to-build examples and clear explanations. It is packed with screenshots to aid your understanding of the process. This book is aimed at beginners in Generics. It assumes some working knowledge of C# , but it isn't mandatory. The following would get the most use out of the book: Newbie C# developers struggling with Generics. Experienced C++ and Java Programmers who are migrating to C# and looking for an alternative to other generic frameworks like STL and JCF would find this book handy.

  10. The Net Reclassification Index (NRI)

    DEFF Research Database (Denmark)

    Pepe, Margaret S.; Fan, Jing; Feng, Ziding

    2015-01-01

    The Net Reclassification Index (NRI) is a very popular measure for evaluating the improvement in prediction performance gained by adding a marker to a set of baseline predictors. However, the statistical properties of this novel measure have not been explored in depth. We demonstrate the alarming...... marker is proven to erroneously yield a positive NRI. Some insight into this phenomenon is provided. Since large values for the NRI statistic may simply be due to use of poorly fitting risk models, we suggest caution in using the NRI as the basis for marker evaluation. Other measures of prediction...

  11. Versatile Wireless Data Net Project

    Data.gov (United States)

    National Aeronautics and Space Administration — The proposed R&D is to develop a wireless data networking capability. A prototype capability will result from the Phase 1 and 2 contracts. The Versatile Wireless...

  12. Context-Aware Mobility Management in HetNets: A Reinforcement Learning Approach

    OpenAIRE

    Simsek, Meryem; Bennis, Mehdi; Güvenc, Ismail

    2015-01-01

    The use of small cell deployments in heterogeneous network (HetNet) environments is expected to be a key feature of 4G networks and beyond, and essential for providing higher user throughput and cell-edge coverage. However, due to different coverage sizes of macro and pico base stations (BSs), such a paradigm shift introduces additional requirements and challenges in dense networks. Among these challenges is the handover performance of user equipment (UEs), which will be impacted especially w...

  13. LightNet: A Versatile, Standalone Matlab-based Environment for Deep Learning

    OpenAIRE

    Ye, Chengxi; Zhao, Chen; Yang, Yezhou; Fermuller, Cornelia; Aloimonos, Yiannis

    2016-01-01

    LightNet is a lightweight, versatile and purely Matlab-based deep learning framework. The idea underlying its design is to provide an easy-to-understand, easy-to-use and efficient computational platform for deep learning research. The implemented framework supports major deep learning architectures such as Multilayer Perceptron Networks (MLP), Convolutional Neural Networks (CNN) and Recurrent Neural Networks (RNN). The framework also supports both CPU and GPU computation, and the switch betwe...

  14. Delft FEWS: an open interface that connects models and data streams for operational forecasting systems

    Science.gov (United States)

    de Rooij, Erik; Werner, Micha

    2010-05-01

    Many of the operational forecasting systems that are in use today are centred around a single modelling suite. Over the years these systems and the required data streams have been tailored to provide a closed-knit interaction with their underlying modelling components. However, as time progresses it becomes a challenge to integrate new technologies into these model centric operational systems. Often the software used to develop these systems is out of date, or the original designers of these systems are no longer available. Additionally, the changing of the underlying models may requiring the complete system to be changed. This then becomes an extensive effort, not only from a software engineering point of view, but also from a training point of view. Due to significant time and resources being committed to re-training the forecasting teams that interact with the system on a daily basis. One approach to reducing the effort required in integrating new models and data is through an open interface architecture, and through the use of defined interfaces and standards in data exchange. This approach is taken by the Delft-FEWS operational forecasting shell, which has now been applied in some 40 operational forecasting centres across the world. The Delft-FEWS framework provides several interfaces that allow models and data in differing formats to be flexibly integrated with the system. The most common approach to the integration of modes is through the Delft-FEWS Published Interface. This is an XML based data exchange format that supports the exchange of time series data, as well as vector and gridded data formats. The Published Interface supports standardised data formats such as GRIB and the NetCDF-CF standard. A wide range of models has been integrated with the system through this approach, and these are used operationally across the forecasting centres using Delft FEWS. Models can communicate directly with the interface of Delft-FEWS, or through a SOAP service. This

  15. iWordNet: A New Approach to Cognitive Science and Artificial Intelligence

    Directory of Open Access Journals (Sweden)

    Mark Chang

    2017-01-01

    Full Text Available One of the main challenges in artificial intelligence or computational linguistics is understanding the meaning of a word or concept. We argue that the connotation of the term “understanding,” or the meaning of the word “meaning,” is merely a word mapping game due to unavoidable circular definitions. These circular definitions arise when an individual defines a concept, the concepts in its definition, and so on, eventually forming a personalized network of concepts, which we call an iWordNet. Such an iWordNet serves as an external representation of an individual’s knowledge and state of mind at the time of the network construction. As a result, “understanding” and knowledge can be regarded as a calculable statistical property of iWordNet topology. We will discuss the construction and analysis of the iWordNet, as well as the proposed “Path of Understanding” in an iWordNet that characterizes an individual’s understanding of a complex concept such as a written passage. In our pilot study of 20 subjects we used a regression model to demonstrate that the topological properties of an individual’s iWordNet are related to his IQ score, a relationship that suggests iWordNets as a potential new methodology to studying cognitive science and artificial intelligence.

  16. Greening the NetFPGA Reference Router

    Directory of Open Access Journals (Sweden)

    Feng Guo

    2016-06-01

    Full Text Available Energy efficiency is an important criterion in the design of next generation networks for both economic and environmental concerns. This paper presents an energy-efficient router that is able to dynamically adapt its routing capability in response to real-time traffic load, achieving energy proportional routing. The NetFPGA reference router, which operates at one of two frequencies (125 MHz or 62.5 MHz, requires a board reset to switch frequencies. We have modified the reference router to allow dynamic switching among five operating frequencies. Experiments with real traces indicate that, compared to the reference router, a 10% power reduction can be achieved through dynamic frequency scaling. When the router is further modified to support green traffic engineering and Ethernet port shut-down, power consumption can be reduced by 46% while maintaining the required quality of service. This allows the router to meet the instantaneous performance requirements while minimizing power dissipation. Similar results can be expected when these general power-saving principles are applied in future commercial routers.

  17. Too Few Women, Docs Understand Dangers of Heart Disease

    Science.gov (United States)

    ... html Too Few Women, Docs Understand Dangers of Heart Disease It kills more than all cancers combined, but ... 22, 2017 THURSDAY, June 22, 2017 (HealthDay News) -- Heart disease is the leading killer of U.S. women, but ...

  18. Few-quantum-dot lasing in photonic crystal nanocavities

    DEFF Research Database (Denmark)

    Liu, Jin; Ates, Serkan; Stobbe, Søren

    2012-01-01

    A very smooth lasing transition in photonic crystal nanocavities with embedded quantum dots is observed and compared to the theory. Decay rate measurements reveal that only a few quantum dots are feeding the cavity....

  19. SEMANTIC3D.NET: a New Large-Scale Point Cloud Classification Benchmark

    Science.gov (United States)

    Hackel, T.; Savinov, N.; Ladicky, L.; Wegner, J. D.; Schindler, K.; Pollefeys, M.

    2017-05-01

    This paper presents a new 3D point cloud classification benchmark data set with over four billion manually labelled points, meant as input for data-hungry (deep) learning methods. We also discuss first submissions to the benchmark that use deep convolutional neural networks (CNNs) as a work horse, which already show remarkable performance improvements over state-of-the-art. CNNs have become the de-facto standard for many tasks in computer vision and machine learning like semantic segmentation or object detection in images, but have no yet led to a true breakthrough for 3D point cloud labelling tasks due to lack of training data. With the massive data set presented in this paper, we aim at closing this data gap to help unleash the full potential of deep learning methods for 3D labelling tasks. Our semantic3D.net data set consists of dense point clouds acquired with static terrestrial laser scanners. It contains 8 semantic classes and covers a wide range of urban outdoor scenes: churches, streets, railroad tracks, squares, villages, soccer fields and castles. We describe our labelling interface and show that our data set provides more dense and complete point clouds with much higher overall number of labelled points compared to those already available to the research community. We further provide baseline method descriptions and comparison between methods submitted to our online system. We hope semantic3D.net will pave the way for deep learning methods in 3D point cloud labelling to learn richer, more general 3D representations, and first submissions after only a few months indicate that this might indeed be the case.

  20. Virtual Control Policy for Binary Ordered Resources Petri Net Class

    Directory of Open Access Journals (Sweden)

    Carlos A. Rovetto

    2016-08-01

    Full Text Available Prevention and avoidance of deadlocks in sensor networks that use the wormhole routing algorithm is an active research domain. There are diverse control policies that will address this problem being our approach a new method. In this paper we present a virtual control policy for the new specialized Petri net subclass called Binary Ordered Resources Petri Net (BORPN. Essentially, it is an ordinary class constructed from various state machines that share unitary resources in a complex form, which allows branching and joining of processes. The reduced structure of this new class gives advantages that allow analysis of the entire system’s behavior, which is a prohibitive task for large systems because of the complexity and routing algorithms.

  1. -Net Approach to Sensor -Coverage

    Directory of Open Access Journals (Sweden)

    Fusco Giordano

    2010-01-01

    Full Text Available Wireless sensors rely on battery power, and in many applications it is difficult or prohibitive to replace them. Hence, in order to prolongate the system's lifetime, some sensors can be kept inactive while others perform all the tasks. In this paper, we study the -coverage problem of activating the minimum number of sensors to ensure that every point in the area is covered by at least sensors. This ensures higher fault tolerance, robustness, and improves many operations, among which position detection and intrusion detection. The -coverage problem is trivially NP-complete, and hence we can only provide approximation algorithms. In this paper, we present an algorithm based on an extension of the classical -net technique. This method gives an -approximation, where is the number of sensors in an optimal solution. We do not make any particular assumption on the shape of the areas covered by each sensor, besides that they must be closed, connected, and without holes.

  2. Comparison of Cox Model Methods in A Low-dimensional Setting with Few Events

    Directory of Open Access Journals (Sweden)

    Francisco M. Ojeda

    2016-08-01

    Full Text Available Prognostic models based on survival data frequently make use of the Cox proportional hazards model. Developing reliable Cox models with few events relative to the number of predictors can be challenging, even in low-dimensional datasets, with a much larger number of observations than variables. In such a setting we examined the performance of methods used to estimate a Cox model, including (i full model using all available predictors and estimated by standard techniques, (ii backward elimination (BE, (iii ridge regression, (iv least absolute shrinkage and selection operator (lasso, and (v elastic net. Based on a prospective cohort of patients with manifest coronary artery disease (CAD, we performed a simulation study to compare the predictive accuracy, calibration, and discrimination of these approaches. Candidate predictors for incident cardiovascular events we used included clinical variables, biomarkers, and a selection of genetic variants associated with CAD. The penalized methods, i.e., ridge, lasso, and elastic net, showed a comparable performance, in terms of predictive accuracy, calibration, and discrimination, and outperformed BE and the full model. Excessive shrinkage was observed in some cases for the penalized methods, mostly on the simulation scenarios having the lowest ratio of a number of events to the number of variables. We conclude that in similar settings, these three penalized methods can be used interchangeably. The full model and backward elimination are not recommended in rare event scenarios.

  3. Linear discontinuous finite difference formulation for synthetic coarse-mesh few-group diffusion calculations

    Energy Technology Data Exchange (ETDEWEB)

    Aragones, J.M.; Ahnert, C.

    1986-12-01

    A linear discontinuous finite difference formulation to solve the diffusion equations in coarse mesh and few groups is developed. The correction factors for heterogeneities, coarse mesh, and spectral effects are general interface flux discontinuity factors that can be explicitly calculated (synthetized) from detailed diffusion or transport solutions in fine mesh (heterogeneous) and multigroups, preserving the integrated fluxes and interface net currents. The stability is explicitly established for general synthetizations and for specific fine to coarse mesh and group reductions. Computing methods have been implemented for one-group (grey) synthetic diffusion acceleration, two-dimensional nodal/local solutions, and three-dimensional nodal simulation of pressurized water reactor cores. Results demonstrate the simplicity and stability of the formulation, a regular behaviour of the correction factors, an outstanding acceleration performance, and high potential for parallel and vector computing.

  4. Classification using Bayesian neural nets

    NARCIS (Netherlands)

    J.C. Bioch (Cor); O. van der Meer; R. Potharst (Rob)

    1995-01-01

    textabstractRecently, Bayesian methods have been proposed for neural networks to solve regression and classification problems. These methods claim to overcome some difficulties encountered in the standard approach such as overfitting. However, an implementation of the full Bayesian approach to

  5. Net Neutrality: The Great Debate

    Science.gov (United States)

    Connolly, Mary

    2015-01-01

    FCC Chairman Tom Wheeler, speaking at the International Consumer Electronics Show in January, called for an open Internet which would make sure that ISPs had economic incentives to build better networks while still protecting consumers and innovators. His specific recommendations were shared with the other members of the FCC in February. One of…

  6. Fifth International Conference on Networks & Communications

    CERN Document Server

    Nagamalai, Dhinaharan; Rajasekaran, Sanguthevar

    2014-01-01

    This book covers theory, methodology and applications of computer networks, network protocols and wireless networks, data communication technologies, and network security. The book is based on the proceedings from the Fifth International Conference on Networks & Communications (NetCom). The proceedings will feature peer-reviewed papers that illustrate research results, projects, surveys and industrial experiences that describe significant advances in the diverse areas of computer networks & communications.

  7. Application and Theory of Petri Nets

    DEFF Research Database (Denmark)

    This volume contains the proceedings of the 13th International Conference onApplication and Theory of Petri Nets, held in Sheffield, England, in June 1992. The aim of the Petri net conferences is to create a forum for discussing progress in the application and theory of Petri nets. Typically....... Balbo and W. Reisig, 18 submitted papers, and seven project papers. The submitted papers and project presentations were selectedby the programme committee and a panel of referees from a large number of submissions....

  8. Texture Based Image Analysis With Neural Nets

    Science.gov (United States)

    Ilovici, Irina S.; Ong, Hoo-Tee; Ostrander, Kim E.

    1990-03-01

    In this paper, we combine direct image statistics and spatial frequency domain techniques with a neural net model to analyze texture based images. The resultant optimal texture features obtained from the direct and transformed image form the exemplar pattern of the neural net. The proposed approach introduces an automated texture analysis applied to metallography for determining the cooling rate and mechanical working of the materials. The results suggest that the proposed method enhances the practical applications of neural nets and texture extraction features.

  9. Factors associated with mosquito net use by individuals in households owning nets in Ethiopia

    Directory of Open Access Journals (Sweden)

    Graves Patricia M

    2011-12-01

    Full Text Available Abstract Background Ownership of insecticidal mosquito nets has dramatically increased in Ethiopia since 2006, but the proportion of persons with access to such nets who use them has declined. It is important to understand individual level net use factors in the context of the home to modify programmes so as to maximize net use. Methods Generalized linear latent and mixed models (GLLAMM were used to investigate net use using individual level data from people living in net-owning households from two surveys in Ethiopia: baseline 2006 included 12,678 individuals from 2,468 households and a sub-sample of the Malaria Indicator Survey (MIS in 2007 included 14,663 individuals from 3,353 households. Individual factors (age, sex, pregnancy; net factors (condition, age, net density; household factors (number of rooms [2006] or sleeping spaces [2007], IRS, women's knowledge and school attendance [2007 only], wealth, altitude; and cluster level factors (rural or urban were investigated in univariate and multi-variable models for each survey. Results In 2006, increased net use was associated with: age 25-49 years (adjusted (a OR = 1.4, 95% confidence interval (CI 1.2-1.7 compared to children U5; female gender (aOR = 1.4; 95% CI 1.2-1.5; fewer nets with holes (Ptrend = 0.002; and increasing net density (Ptrend [all nets in HH good] = 1.6; 95% CI 1.2-2.1; increasing net density (Ptrend [per additional space] = 0.6, 95% CI 0.5-0.7; more old nets (aOR [all nets in HH older than 12 months] = 0.5; 95% CI 0.3-0.7; and increasing household altitude (Ptrend Conclusion In both surveys, net use was more likely by women, if nets had fewer holes and were at higher net per person density within households. School-age children and young adults were much less likely to use a net. Increasing availability of nets within households (i.e. increasing net density, and improving net condition while focusing on education and promotion of net use, especially in school-age children

  10. 'Operation recovery'--the Atlantic coastal netting project

    Science.gov (United States)

    Baird, J.; Robbins, C.S.; Bagg, A.M.; Dennis, J.V.

    1958-01-01

    In August and September, 1957, 22 netting stations were operated on and near the Atlantic coast from Nova Scotia to North Carolina. Two were manned for the entire two-month period, half of the others from 1 to 5 weeks, and the remainder for only a few days. Total bandings amounted to 11,613 individuals of 130 species, of which passerine birds made up 97 per cent of the total individuals. Nearly half the birds handled belonged to two families, Parulidae and Fringillidae. The 3 top species, Catbird, Song Sparrow, and Swainson's Thrush, comprised 30 percent of the total. A brief summary of location, habitat, and principal species banded is given for each station. At Middletown, R. I., 92 specimens of 3 species of Hippoboscidae were collected from netted birds. Eleven direct recoveries were reported in 1957, as compared with one each in the 2 preceding years. Two of the 11 were subsequently taken at another coastal netting station, and a third was trapped at a feeding station. The shortest interval of recovery was 5 days for a Northern Waterthrush that was banded at Plum Island, Mass., on September 2 and recaptured at Island Beach, N. J., on September 7, 1957. Observed direction of migration and of local movement at netting stations is discussed, as is distribution of recovery records. Three of the first four recovery records came from north or east of the netting station, quite contrary to the expected direction of fall migration. All cold-frontal passages during August and September are discussed, together with a brief review of their effects on migration at various coastal netting stations. The movement of a high pressure cell from the Great Lakes toward the Maritime Provinces results in a sustained northerly (southward) flow of polar air for two or more days after passage of a cold front; this produces several days of migratory activity, the second frequently being the best. If, however, the High drifts southeastward, stations to the north of its center soon

  11. Introducing idioms in the Galician WordNet: methods, problems and results

    OpenAIRE

    Álvarez de la Granja, María; Gómez Clemente, Xosé María; Gómez Guinovart, Xavier

    2016-01-01

    This study describes the introduction of verbal idioms in the Galician language version (Galnet) of the semantic network WordNet; a network that does not traditionally include many phraseological units. To enhance Galnet, a list of 803 Galician verbal idioms was developed to then review each of them individually and assess whether they could be introduced in an existing WordNet synset (a group of synonyms expressing the same concept) or not. Of those 803 idioms, 490 (61%) could be included in...

  12. Pro Agile NET Development with Scrum

    CERN Document Server

    Blankenship, Jerrel; Millett, Scott

    2011-01-01

    Pro Agile .NET Development with SCRUM guides you through a real-world ASP.NET project and shows how agile methodology is put into practice. There is plenty of literature on the theory behind agile methodologies, but no book on the market takes the concepts of agile practices and applies these in a practical manner to an end-to-end ASP.NET project, especially the estimating, requirements and management aspects of a project. Pro Agile .NET Development with SCRUM takes you through the initial stages of a project - gathering requirements and setting up an environment - through to the development a

  13. Pro ASP.NET MVC 4

    CERN Document Server

    Freeman, Adam

    2012-01-01

    The ASP.NET MVC 4 Framework is the latest evolution of Microsoft's ASP.NET web platform. It provides a high-productivity programming model that promotes cleaner code architecture, test-driven development, and powerful extensibility, combined with all the benefits of ASP.NET. ASP.NET MVC 4 contains a number of significant advances over previous versions. New mobile and desktop templates (employing adaptive rendering) are included together with support for jQuery Mobile for the first time. New display modes allow your application to select views based on the browser that's making the request whi

  14. Professional Visual Basic 2010 and .NET 4

    CERN Document Server

    Sheldon, Bill; Sharkey, Kent

    2010-01-01

    Intermediate and advanced coverage of Visual Basic 2010 and .NET 4 for professional developers. If you've already covered the basics and want to dive deep into VB and .NET topics that professional programmers use most, this is your book. You'll find a quick review of introductory topics-always helpful-before the author team of experts moves you quickly into such topics as data access with ADO.NET, Language Integrated Query (LINQ), security, ASP.NET web programming with Visual Basic, Windows workflow, threading, and more. You'll explore all the new features of Visual Basic 2010 as well as all t

  15. NASA Net Zero Energy Buildings Roadmap

    Energy Technology Data Exchange (ETDEWEB)

    Pless, S.; Scheib, J.; Torcellini, P.; Hendron, B.; Slovensky, M.

    2014-10-01

    In preparation for the time-phased net zero energy requirement for new federal buildings starting in 2020, set forth in Executive Order 13514, NASA requested that the National Renewable Energy Laboratory (NREL) to develop a roadmap for NASA's compliance. NASA detailed a Statement of Work that requested information on strategic, organizational, and tactical aspects of net zero energy buildings. In response, this document presents a high-level approach to net zero energy planning, design, construction, and operations, based on NREL's first-hand experience procuring net zero energy construction, and based on NREL and other industry research on net zero energy feasibility. The strategic approach to net zero energy starts with an interpretation of the executive order language relating to net zero energy. Specifically, this roadmap defines a net zero energy acquisition process as one that sets an aggressive energy use intensity goal for the building in project planning, meets the reduced demand goal through energy efficiency strategies and technologies, then adds renewable energy in a prioritized manner, using building-associated, emission- free sources first, to offset the annual energy use required at the building; the net zero energy process extends through the life of the building, requiring a balance of energy use and production in each calendar year.

  16. Towards a Standard for Modular Petri Nets

    DEFF Research Database (Denmark)

    Kindler, Ekkart; Petrucci, Laure

    2009-01-01

    When designing complex systems, mechanisms for structuring, composing, and reusing system components are crucial. Today, there are many approaches for equipping Petri nets with such mechanisms. In the context of defining a standard interchange format for Petri nets, modular PNML was defined....... Moreover, we present and discuss some more advanced features of modular Petri nets that could be included in the standard. This way, we provide a formal foundation and a basis for a discussion of features to be included in the upcoming standard of a module concept for Petri nets in general and for high...

  17. Wyoming: "A Net Positive Session"

    OpenAIRE

    Schuhmann, Robert A.

    2016-01-01

    Wyoming’s general legislative session concluded March 6, 2015 with the passage of 185 bills and nearly $285 million in new spending.[1] Because this was a general session rather than a budget session, very few budget issues were addressed. However, key budgetary matters this year included: (1) addressing a $222 million shortfall brought about by falling oil prices and (2) several new capital construction projects spread across the state and at the University of Wyoming. Wyoming democrats in t...

  18. Experiments and simulation of a net closing mechanism for tether-net capture of space debris

    Science.gov (United States)

    Sharf, Inna; Thomsen, Benjamin; Botta, Eleonora M.; Misra, Arun K.

    2017-10-01

    This research addresses the design and testing of a debris containment system for use in a tether-net approach to space debris removal. The tether-net active debris removal involves the ejection of a net from a spacecraft by applying impulses to masses on the net, subsequent expansion of the net, the envelopment and capture of the debris target, and the de-orbiting of the debris via a tether to the chaser spacecraft. To ensure a debris removal mission's success, it is important that the debris be successfully captured and then, secured within the net. To this end, we present a concept for a net closing mechanism, which we believe will permit consistently successful debris capture via a simple and unobtrusive design. This net closing system functions by extending the main tether connecting the chaser spacecraft and the net vertex to the perimeter and around the perimeter of the net, allowing the tether to actuate closure of the net in a manner similar to a cinch cord. A particular embodiment of the design in a laboratory test-bed is described: the test-bed itself is comprised of a scaled-down tether-net, a supporting frame and a mock-up debris. Experiments conducted with the facility demonstrate the practicality of the net closing system. A model of the net closure concept has been integrated into the previously developed dynamics simulator of the chaser/tether-net/debris system. Simulations under tether tensioning conditions demonstrate the effectiveness of the closure concept for debris containment, in the gravity-free environment of space, for a realistic debris target. The on-ground experimental test-bed is also used to showcase its utility for validating the dynamics simulation of the net deployment, and a full-scale automated setup would make possible a range of validation studies of other aspects of a tether-net debris capture mission.

  19. Elastic and inelastic pion reactions on few nucleon systems

    Energy Technology Data Exchange (ETDEWEB)

    Lensky, V.

    2007-09-29

    In the present work, we are studying elastic and inelastic pion reactions on few-body systems within the framework of chiral effective theory. We consider two specific reactions involving pions on few-nucleon systems, namely pion production in nucleon-nucleon collisions, and incoherent pion photoproduction on the deuteron. These two reactions are closely related to the issue of dispersive and absorptive corrections to the pion-deuteron scattering length, which we also consider in our analysis. The incoherent pion photoproduction is also considered as the possible source for a high-precision determination of the neutron-neutron scattering length. (orig.)

  20. Few-body integrodifferential equation on Lagrange mesh

    Science.gov (United States)

    Rampho, G. J.; Mabunda, L. C.; Ramantswana, M.

    2017-10-01

    The two-variable integrodifferential equation for few-body systems is solved using the Lagrange-mesh method. The method transforms the equation into a system of algebraic equations that are solved as a non-symmetric matrix eigenvalue problem. Convergence properties of the solution to the integrodifferential equation in relation to the problem parameters is investigated. The accuracy of the converged solution is tested by calculating the binding energies and root-mean-square radii of selected few-body systems. The results are compared to those generated by other methods.

  1. Hierarchy in air travel: Few large and many small

    Science.gov (United States)

    Bejan, A.; Chen, R.; Lorente, S.; Wen, C. Y.

    2017-07-01

    Here, we document the diversity of commercial aircraft models and bodies in use during the past five decades. Special emphasis is on the models that have moved humanity across the globe during the past three decades. The first objective is to show that the apparent diversity is in fact underpinned (sustained) by organization, which is a distinct hierarchy of "few large and many small" coexisting and moving people harmoniously everywhere. The second objective is to rely on the emerging hierarchy in order to predict for the future how few the even bigger models will be and how more numerous the even smaller models (e.g., drones for package delivery) will be, naturally.

  2. Chemical storage of hydrogen in few-layer graphene

    Science.gov (United States)

    Subrahmanyam, K. S.; Kumar, Prashant; Maitra, Urmimala; Govindaraj, A.; Hembram, K. P. S. S.; Waghmare, Umesh V.; Rao, C. N. R.

    2011-01-01

    Birch reduction of few-layer graphene samples gives rise to hydrogenated samples containing up to 5 wt % of hydrogen. Spectroscopic studies reveal the presence of sp3 C-H bonds in the hydrogenated graphenes. They, however, decompose readily on heating to 500 °C or on irradiation with UV or laser radiation releasing all the hydrogen, thereby demonstrating the possible use of few-layer graphene for chemical storage of hydrogen. First-principles calculations throw light on the mechanism of dehydrogenation that appears to involve a significant reconstruction and relaxation of the lattice. PMID:21282617

  3. Communicating with the Net Generation

    Science.gov (United States)

    2011-03-11

    minimizes viral attacks but significant threats still remain that need to be defended against. 60 17 Smartphones, particularly iPhones and Android ...security measures to safeguard smart phones from Blended Attacks, worms and viruses, and Peer-to-Peer applications where adversaries gain access to...military App Store for Android , 3G for battlefields,‖ Syfy Network online, March 4, 2010, http://dvice.com/archives/2010/03/darpa-wants-mil.php, (accessed

  4. BioTerNet Networking and Strain Tracking

    Science.gov (United States)

    2006-07-01

    epidemiological surveillance and recognition of bioterrorism/biowarfare attacks. To meet these requirements, the following need to be developed:  A fast...brevundimonas 48 46 95.8% 0 brucella 85 81 95.3% 0 burkholderia 117 106 90.6% 0 campylobacter 259 231 89.2% 1 cardiobacterium 8 7 87.5% 0 cdc group ef4 10 8 80.0...and analyzing epidemiological data from remote sites. The database schema design and implementation used in the prototype will be included in a future

  5. The network is the message : Fase 1: het net ophalen

    NARCIS (Netherlands)

    Rogier Brussee; Dr. Lotte M. Willemsen; Thijs Waardenburg; Dr. Gerrita van der Veen

    2016-01-01

    Veel bedrijven staan reeds via social media als Facebook of Twitter in contact met hun gebruikers en iedere serieuze marketingcampagne werkt tegenwoordig met likes en tweets. Hoeveel ze daarin investeren en in de toekomst willen blijven doen, hangt af van de effectiviteit van social media. Maar

  6. Crowdsourcing Physical Network Topology Mapping With Net.Tagger

    Science.gov (United States)

    2016-03-01

    Positioning DWDM Dense Wavelength-Division Multiplexing FCC Federal Communications Commission FCC Federal Communications Commission FDM Frequency...extracted. Dense Wavelength-Division Multiplexing ( DWDM ), a subset of WDM, theoretically permits placing up to 100 10GB/s channels over optical media [9

  7. Productivity, Social Networks and Net Communities in the Workplace

    Science.gov (United States)

    Asunda, Paul

    2010-01-01

    The 21st century workplace is being shaped by ever-changing technological innovations, shifting demographic patterns, globalization and power shifts, in addition to different economic players such as policymakers, employers, education and training institutions that shape the quality of the future workforce. In today's work environment,…

  8. Network or Net Worth? Deconstructing the Knowledge Society

    Science.gov (United States)

    Dyer, Maxine

    2012-01-01

    One of the major issues facing humanity in the twenty-first century is how the increasing effects of globalisation will play out in relation to existing societal and global inequalities. At the very crux of this issue are the terms "knowledge society" and "knowledge economy", two terms employed in a variety of different…

  9. Energy performance of net-zero and near net-zero energy homes in New England

    Science.gov (United States)

    Thomas, Walter D.

    Net-Zero Energy Homes (NZEHs) are homes that consume no more energy than they produce on site during the course of a year. They are well insulated and sealed, use energy efficient appliances, lighting, and mechanical equipment, are designed to maximize the benefits from day lighting, and most often use a combination of solar hot water, passive solar and photovoltaic (PV) panels to produce their on-site energy. To date, NZEHs make up a miniscule percentage of homes in the United States, and of those, few have had their actual performance measured and analyzed once built and occupied. This research focused on 19 NZEHs and near net-zero energy homes (NNZEHs) built in New England. This set of homes had varying designs, numbers of occupants, and installed technologies for energy production, space heating and cooling, and domestic hot water systems. The author worked with participating homeowners to collect construction and systems specifications, occupancy information, and twelve months of energy consumption, production and cost measurements, in order to determine whether the homes reached their respective energy performance design goals. The author found that six out of ten NZEHs achieved net-zero energy or better, while all nine of the NNZEHs achieved an energy density (kWh/ft 2/person) at least half as low as the control house, also built in New England. The median construction cost for the 19 homes was 155/ft 2 vs. 110/ft2 for the US average, their average monthly energy cost was 84% below the average for homes in New England, and their estimated CO2 emissions averaged 90% below estimated CO2 emissions from the control house. Measured energy consumption averaged 14% below predictions for the NZEHs and 38% above predictions for the NNZEHs, while generated energy was within +/- 10% of predicted for 17 out of 18 on-site PV systems. Based on these results, the author concludes that these types of homes can meet or exceed their designed energy performance (depending on

  10. HANPP Collection: Human Appropriation of Net Primary Productivity as a Percentage of Net Primary Productivity

    Data.gov (United States)

    National Aeronautics and Space Administration — The Human Appropriation of Net Primary Productivity (HANPP) as a Percentage of Net Primary Product (NPP) portion of the HANPP Collection represents a map identifying...

  11. Price smarter on the Net.

    Science.gov (United States)

    Baker, W; Marn, M; Zawada, C

    2001-02-01

    Companies generally have set prices on the Internet in two ways. Many start-ups have offered untenably low prices in a rush to capture first-mover advantage. Many incumbents have simply charged the same prices on-line as they do off-line. Either way, companies are missing a big opportunity. The fundamental value of the Internet lies not in lowering prices or making them consistent but in optimizing them. After all, if it's easy for customers to compare prices on the Internet, it's also easy for companies to track customers' behavior and adjust prices accordingly. The Net lets companies optimize prices in three ways. First, it lets them set and announce prices with greater precision. Different prices can be tested easily, and customers' responses can be collected instantly. Companies can set the most profitable prices, and they can tap into previously hidden customer demand. Second, because it's so easy to change prices on the Internet, companies can adjust prices in response to even small fluctuations in market conditions, customer demand, or competitors' behavior. Third, companies can use the clickstream data and purchase histories that it collects through the Internet to segment customers quickly. Then it can offer segment-specific prices or promotions immediately. By taking full advantage of the unique possibilities afforded by the Internet to set prices with precision, adapt to changing circumstances quickly, and segment customers accurately, companies can get their pricing right. It's one of the ultimate drivers of e-business success.

  12. Organizational Change Effectiveness: A Few Significant Indicators for Romanian Companies

    Directory of Open Access Journals (Sweden)

    Orlando Voica

    2013-12-01

    Full Text Available This paper examines organizational change, focusing on the outputs of the implementation process. Through a questionnaire-based survey, we sought after factors that characterize the outputs of organizational changes within Romanian companies. We have shown that among various outputs, a few of them characterize the successful achievement of the change’s goals.

  13. On a few Coleoptera from the island of Riouw

    NARCIS (Netherlands)

    Ritsema Cz., C.

    1887-01-01

    In two bottles with Reptiles and Fishes from the island of Riouw (lying south of Malacca) sent over by Mr. A. H. G. Blokzeyl, formerly Resident of the Riouw Archipelago, and kindly presented by him to the Leyden Museum, were also a few Arthropods. Of these, eleven species belong to the Coleoptera,

  14. Optical vortex propagation in few-mode rectangular polymer waveguides

    DEFF Research Database (Denmark)

    Lyubopytov, Vladimir S.; Chipouline, Arkadi; Zywietz, Urs

    2017-01-01

    We demonstrate that rectangular few-mode dielectric waveguides, fabricated with standard lithographic technique, can support on-chip propagation of optical vortices. We show that specific superpositions of waveguide eigenmodes form quasi-degenerate modes carrying light with high purity states...

  15. Biodiversity of few Indian charophyte taxa based on molecular ...

    African Journals Online (AJOL)

    Biodiversity of few Indian charophyte taxa based on molecular characterization and construction of phylogenetic tree. ... such as band frequency, RAPD polymorphism, genetic identity index or similarity index, band sharing frequency and genetic distance within and in between Chara and Nitella were evaluated. With the ...

  16. Survey Finds that Few Women Are Teaching in PR Programs.

    Science.gov (United States)

    Lance, Elizabeth P.

    1986-01-01

    Presents results of a survey indicating that although nearly 70 percent of undergraduate public relations majors are women, these students have few female role models teaching them. Indicates that those women currently teaching public relations carry heavy teaching and student contact responsibilities, primarily because of their beginning faculty…

  17. Hadronic parity violation in few-body systems

    Directory of Open Access Journals (Sweden)

    Schindler M. R.

    2016-01-01

    Full Text Available Efforts to describe hadronic parity violation in few-nucleon systems using effective field theories are described. Particular emphasis is given to observables in two- and three-nucleon systems and their relation to ongoing experimental efforts. The role of parityviolating three-nucleon interactions is also discussed.

  18. A chainlike relative coordinate system for few-particle problems

    DEFF Research Database (Denmark)

    Avery, James Emil; Avery, John Scales

    2017-01-01

    Jacobi coordinates have often been used to treat few-particle quantum systems. In this paper, we propose an alternative coordinate system which is very easily generalized as the number of particles becomes larger. We make use of forms of the Laplace--Beltrami operator that are invariant under gen...

  19. and a few-cycle regimes with Raman response

    Indian Academy of Sciences (India)

    diagnostics and imaging, controlled manipulation of chemical reactions and bond formation, and coherent quantum control of microscopic dynamics. As a result, presently, there is a great deal of interest in the study of propagation characteris- tics of a single- and a few-cycle pulses in linear as well as nonlinear media.

  20. Becoming a Teacher: Stories of the First Few Years

    Science.gov (United States)

    Conway, Colleen; Hansen, Erin; Schulz, Andrew; Stimson, Jeff; Wozniak-Reese, Jill

    2004-01-01

    The need for understanding the issues facing beginning teachers is well documented in the education literature. Within music education, there is also growing interest in the challenges of the first years and the overall life cycle of a music teacher. However, few sources have used the stories of beginning teachers themselves to illustrate the…