WorldWideScience

Sample records for network fews net

  1. Review of FEWS NET Biophysical Monitoring Requirements

    Science.gov (United States)

    Ross, K. W.; Brown, Molly E.; Verdin, J.; Underwood, L. W.

    2009-01-01

    The Famine Early Warning System Network (FEWS NET) provides monitoring and early warning support to decision makers responsible for responding to famine and food insecurity. FEWS NET transforms satellite remote sensing data into rainfall and vegetation information that can be used by these decision makers. The National Aeronautics and Space Administration has recently funded activities to enhance remote sensing inputs to FEWS NET. To elicit Earth observation requirements, a professional review questionnaire was disseminated to FEWS NET expert end-users: it focused upon operational requirements to determine additional useful remote sensing data and; subsequently, beneficial FEWS NET biophysical supplementary inputs. The review was completed by over 40 experts from around the world, enabling a robust set of professional perspectives to be gathered and analyzed rapidly. Reviewers were asked to evaluate the relative importance of environmental variables and spatio-temporal requirements for Earth science data products, in particular for rainfall and vegetation products. The results showed that spatio-temporal resolution requirements are complex and need to vary according to place, time, and hazard: that high resolution remote sensing products continue to be in demand, and that rainfall and vegetation products were valued as data that provide actionable food security information.

  2. FEWS NET Price Volatility Data 2002-2012

    Data.gov (United States)

    US Agency for International Development — This dataset from the Famine Early Warning System Network (FEWS NET) documents ten years, from 2002 to 2012, of cereal price fluctuations across twenty-five African...

  3. Famine Early Warning Systems Network (FEWS NET) Contributions to Strengthening Resilience and Sustainability for the East African Community

    Science.gov (United States)

    Budde, M. E.; Galu, G.; Funk, C. C.; Verdin, J. P.; Rowland, J.

    2014-12-01

    The Planning for Resilience in East Africa through Policy, Adaptation, Research, and Economic Development (PREPARED) is a multi-organizational project aimed at mainstreaming climate-resilient development planning and program implementation into the East African Community (EAC). The Famine Early Warning Systems Network (FEWS NET) has partnered with the PREPARED project to address three key development challenges for the EAC; 1) increasing resiliency to climate change, 2) managing trans-boundary freshwater biodiversity and conservation and 3) improving access to drinking water supply and sanitation services. USGS FEWS NET has been instrumental in the development of gridded climate data sets that are the fundamental building blocks for climate change adaptation studies in the region. Tools such as the Geospatial Climate Tool (GeoCLIM) have been developed to interpolate time-series grids of precipitation and temperature values from station observations and associated satellite imagery, elevation data, and other spatially continuous fields. The GeoCLIM tool also allows the identification of anomalies and assessments of both their frequency of occurrence and directional trends. A major effort has been put forth to build the capacities of local and regional institutions to use GeoCLIM to integrate their station data (which is not typically available to the public) into improved national and regional gridded climate data sets. In addition to the improvements and capacity building activities related to geospatial analysis tools, FEWS NET will assist in two other areas; 1) downscaling of climate change scenarios and 2) vulnerability impact assessments. FEWS NET will provide expertise in statistical downscaling of Global Climate Model output fields and work with regional institutions to assess results of other downscaling methods. Completion of a vulnerability impact assessment (VIA) involves the examination of sectoral consequences in identified climate "hot spots". FEWS NET

  4. Linking Research to Practice: FEWS NET and Its Use of Satellite Remote Sensing Data

    Science.gov (United States)

    Brown, Molly E.; Brickley, Elizabeth B.

    2011-01-01

    The purpose of the Famine Early Warning Systems Network (FEWS NET) is to collaborate with international, regional and national partners to provide timely and rigorous early warning and vulnerability information on emerging and evolving food security issues

  5. SkyNet: A Modular Nuclear Reaction Network Library

    Science.gov (United States)

    Lippuner, Jonas; Roberts, Luke F.

    2017-12-01

    Almost all of the elements heavier than hydrogen that are present in our solar system were produced by nuclear burning processes either in the early universe or at some point in the life cycle of stars. In all of these environments, there are dozens to thousands of nuclear species that interact with each other to produce successively heavier elements. In this paper, we present SkyNet, a new general-purpose nuclear reaction network that evolves the abundances of nuclear species under the influence of nuclear reactions. SkyNet can be used to compute the nucleosynthesis evolution in all astrophysical scenarios where nucleosynthesis occurs. SkyNet is free and open source, and aims to be easy to use and flexible. Any list of isotopes can be evolved, and SkyNet supports different types of nuclear reactions. SkyNet is modular so that new or existing physics, like nuclear reactions or equations of state, can easily be added or modified. Here, we present in detail the physics implemented in SkyNet with a focus on a self-consistent transition to and from nuclear statistical equilibrium to non-equilibrium nuclear burning, our implementation of electron screening, and coupling of the network to an equation of state. We also present comprehensive code tests and comparisons with existing nuclear reaction networks. We find that SkyNet agrees with published results and other codes to an accuracy of a few percent. Discrepancies, where they exist, can be traced to differences in the physics implementations.

  6. Examining the value of global seasonal reference evapotranspiration forecasts tosupport FEWS NET's food insecurity outlooks

    Science.gov (United States)

    Shukla, S.; McEvoy, D.; Hobbins, M.; Husak, G. J.; Huntington, J. L.; Funk, C.; Verdin, J.; Macharia, D.

    2017-12-01

    The Famine Early Warning Systems Network (FEWS NET) team provides food insecurity outlooks for several developing countries in Africa, Central Asia, and Central America. Thus far in terms of agroclimatic conditions that influence food insecurity, FEWS NET's primary focus has been on the seasonal precipitation forecasts while not adequately accounting for the atmospheric evaporative demand, which is also directly related to agricultural production and hence food insecurity, and is most often estimated by reference evapotranspiration (ETo). This presentation reports on the development of a new global ETo seasonal reforecast and skill evaluation with a particular emphasis on the potential use of this dataset by the FEWS NET to support food insecurity early warning. The ETo reforecasts span the 1982-2009 period and are calculated following ASCE's formulation of Penman-Monteith method driven by seasonal climate forecasts of monthly mean temperature, humidity, wind speed, and solar radiation from NCEP's CFSv2 and NASA's GEOS-5 models. The skill evaluation using deterministic and probabilistic scores focuses on the December-February (DJF), March-May (MAM), June-August (JJA) and September-November (SON) seasons. The results indicate that ETo forecasts are a promising tool for early warning of drought and food insecurity. The FEWS NET regions with promising level of skill (correlation >0.35 at lead times of 3 months) include Northern Sub-Saharan Africa (DJF, dry season), Central America (DJF, dry season), parts of East Africa (JJA, wet Season), Southern Africa (JJA, dry season), and Central Asia (MAM, wet season). A case study over parts of East Africa for the JJA season shows that, in combination with the precipitation forecasts, ETo forecasts could have provided early warning of recent severe drought events (e.g., 2002, 2004, 2009) that contributed to substantial food insecurity in the region.

  7. Inferring Phylogenetic Networks Using PhyloNet.

    Science.gov (United States)

    Wen, Dingqiao; Yu, Yun; Zhu, Jiafan; Nakhleh, Luay

    2018-07-01

    PhyloNet was released in 2008 as a software package for representing and analyzing phylogenetic networks. At the time of its release, the main functionalities in PhyloNet consisted of measures for comparing network topologies and a single heuristic for reconciling gene trees with a species tree. Since then, PhyloNet has grown significantly. The software package now includes a wide array of methods for inferring phylogenetic networks from data sets of unlinked loci while accounting for both reticulation (e.g., hybridization) and incomplete lineage sorting. In particular, PhyloNet now allows for maximum parsimony, maximum likelihood, and Bayesian inference of phylogenetic networks from gene tree estimates. Furthermore, Bayesian inference directly from sequence data (sequence alignments or biallelic markers) is implemented. Maximum parsimony is based on an extension of the "minimizing deep coalescences" criterion to phylogenetic networks, whereas maximum likelihood and Bayesian inference are based on the multispecies network coalescent. All methods allow for multiple individuals per species. As computing the likelihood of a phylogenetic network is computationally hard, PhyloNet allows for evaluation and inference of networks using a pseudolikelihood measure. PhyloNet summarizes the results of the various analyzes and generates phylogenetic networks in the extended Newick format that is readily viewable by existing visualization software.

  8. Net one, net two: the primary care network income statement.

    Science.gov (United States)

    Halley, M D; Little, A W

    1999-10-01

    Although hospital-owned primary care practices have been unprofitable for most hospitals, some hospitals are achieving competitive advantage and sustainable practice operations. A key to the success of some has been a net income reporting tool that separates practice operating expenses from the costs of creating and operating a network of practices to help healthcare organization managers, physicians, and staff to identify opportunities to improve the network's financial performance. This "Net One, Net Two" reporting allows operations leadership to be held accountable for Net One expenses and strategic leadership to be held accountable for Net Two expenses.

  9. Quartet-net: a quartet-based method to reconstruct phylogenetic networks.

    Science.gov (United States)

    Yang, Jialiang; Grünewald, Stefan; Wan, Xiu-Feng

    2013-05-01

    Phylogenetic networks can model reticulate evolutionary events such as hybridization, recombination, and horizontal gene transfer. However, reconstructing such networks is not trivial. Popular character-based methods are computationally inefficient, whereas distance-based methods cannot guarantee reconstruction accuracy because pairwise genetic distances only reflect partial information about a reticulate phylogeny. To balance accuracy and computational efficiency, here we introduce a quartet-based method to construct a phylogenetic network from a multiple sequence alignment. Unlike distances that only reflect the relationship between a pair of taxa, quartets contain information on the relationships among four taxa; these quartets provide adequate capacity to infer a more accurate phylogenetic network. In applications to simulated and biological data sets, we demonstrate that this novel method is robust and effective in reconstructing reticulate evolutionary events and it has the potential to infer more accurate phylogenetic distances than other conventional phylogenetic network construction methods such as Neighbor-Joining, Neighbor-Net, and Split Decomposition. This method can be used in constructing phylogenetic networks from simple evolutionary events involving a few reticulate events to complex evolutionary histories involving a large number of reticulate events. A software called "Quartet-Net" is implemented and available at http://sysbio.cvm.msstate.edu/QuartetNet/.

  10. An Intuitive Dominant Test Algorithm of CP-nets Applied on Wireless Sensor Network

    Directory of Open Access Journals (Sweden)

    Liu Zhaowei

    2014-07-01

    Full Text Available A wireless sensor network is of spatially distributed with autonomous sensors, just like a multi-Agent system with single Agent. Conditional Preference networks is a qualitative tool for representing ceteris paribus (all other things being equal preference statements, it has been a research hotspot in artificial intelligence recently. But the algorithm and complexity of strong dominant test with respect to binary-valued structure CP-nets have not been solved, and few researchers address the application to other domain. In this paper, strong dominant test and application of CP-nets are studied in detail. Firstly, by constructing induced graph of CP-nets and studying its properties, we make a conclusion that the problem of strong dominant test on binary-valued CP-nets is single source shortest path problem essentially, so strong dominant test problem can be solved by improved Dijkstra’s algorithm. Secondly, we apply the algorithm above mentioned to the completeness of wireless sensor network, and design a completeness judging algorithm based on strong dominant test. Thirdly, we apply the algorithm on wireless sensor network to solve routing problem. In the end, we point out some interesting work in the future.

  11. Future Wireless Network: MyNET Platform and End-to-End Network Slicing

    OpenAIRE

    Zhang, Hang

    2016-01-01

    Future wireless networks are facing new challenges. These new challenges require new solutions and strategies of the network deployment, management, and operation. Many driving factors are decisive in the re-definition and re-design of the future wireless network architecture. In the previously published paper "5G Wireless Network - MyNET and SONAC", MyNET and SONAC, a future network architecture, are described. This paper elaborates MyNET platform with more details. The design principles of ...

  12. NET-2 Network Analysis Program

    International Nuclear Information System (INIS)

    Malmberg, A.F.

    1974-01-01

    The NET-2 Network Analysis Program is a general purpose digital computer program which solves the nonlinear time domain response and the linearized small signal frequency domain response of an arbitrary network of interconnected components. NET-2 is capable of handling a variety of components and has been applied to problems in several engineering fields, including electronic circuit design and analysis, missile flight simulation, control systems, heat flow, fluid flow, mechanical systems, structural dynamics, digital logic, communications network design, solid state device physics, fluidic systems, and nuclear vulnerability due to blast, thermal, gamma radiation, neutron damage, and EMP effects. Network components may be selected from a repertoire of built-in models or they may be constructed by the user through appropriate combinations of mathematical, empirical, and topological functions. Higher-level components may be defined by subnetworks composed of any combination of user-defined components and built-in models. The program provides a modeling capability to represent and intermix system components on many levels, e.g., from hole and electron spatial charge distributions in solid state devices through discrete and integrated electronic components to functional system blocks. NET-2 is capable of simultaneous computation in both the time and frequency domain, and has statistical and optimization capability. Network topology may be controlled as a function of the network solution. (U.S.)

  13. BrainNetCNN: Convolutional neural networks for brain networks; towards predicting neurodevelopment.

    Science.gov (United States)

    Kawahara, Jeremy; Brown, Colin J; Miller, Steven P; Booth, Brian G; Chau, Vann; Grunau, Ruth E; Zwicker, Jill G; Hamarneh, Ghassan

    2017-02-01

    We propose BrainNetCNN, a convolutional neural network (CNN) framework to predict clinical neurodevelopmental outcomes from brain networks. In contrast to the spatially local convolutions done in traditional image-based CNNs, our BrainNetCNN is composed of novel edge-to-edge, edge-to-node and node-to-graph convolutional filters that leverage the topological locality of structural brain networks. We apply the BrainNetCNN framework to predict cognitive and motor developmental outcome scores from structural brain networks of infants born preterm. Diffusion tensor images (DTI) of preterm infants, acquired between 27 and 46 weeks gestational age, were used to construct a dataset of structural brain connectivity networks. We first demonstrate the predictive capabilities of BrainNetCNN on synthetic phantom networks with simulated injury patterns and added noise. BrainNetCNN outperforms a fully connected neural-network with the same number of model parameters on both phantoms with focal and diffuse injury patterns. We then apply our method to the task of joint prediction of Bayley-III cognitive and motor scores, assessed at 18 months of age, adjusted for prematurity. We show that our BrainNetCNN framework outperforms a variety of other methods on the same data. Furthermore, BrainNetCNN is able to identify an infant's postmenstrual age to within about 2 weeks. Finally, we explore the high-level features learned by BrainNetCNN by visualizing the importance of each connection in the brain with respect to predicting the outcome scores. These findings are then discussed in the context of the anatomy and function of the developing preterm infant brain. Copyright © 2016 Elsevier Inc. All rights reserved.

  14. ShakeNet: a portable wireless sensor network for instrumenting large civil structures

    Science.gov (United States)

    Kohler, Monica D.; Hao, Shuai; Mishra, Nilesh; Govindan, Ramesh; Nigbor, Robert

    2015-08-03

    We report our findings from a U.S. Geological Survey (USGS) National Earthquake Hazards Reduction Program-funded project to develop and test a wireless, portable, strong-motion network of up to 40 triaxial accelerometers for structural health monitoring. The overall goal of the project was to record ambient vibrations for several days from USGS-instrumented structures. Structural health monitoring has important applications in fields like civil engineering and the study of earthquakes. The emergence of wireless sensor networks provides a promising means to such applications. However, while most wireless sensor networks are still in the experimentation stage, very few take into consideration the realistic earthquake engineering application requirements. To collect comprehensive data for structural health monitoring for civil engineers, high-resolution vibration sensors and sufficient sampling rates should be adopted, which makes it challenging for current wireless sensor network technology in the following ways: processing capabilities, storage limit, and communication bandwidth. The wireless sensor network has to meet expectations set by wired sensor devices prevalent in the structural health monitoring community. For this project, we built and tested an application-realistic, commercially based, portable, wireless sensor network called ShakeNet for instrumentation of large civil structures, especially for buildings, bridges, or dams after earthquakes. Two to three people can deploy ShakeNet sensors within hours after an earthquake to measure the structural response of the building or bridge during aftershocks. ShakeNet involved the development of a new sensing platform (ShakeBox) running a software suite for networking, data collection, and monitoring. Deployments reported here on a tall building and a large dam were real-world tests of ShakeNet operation, and helped to refine both hardware and software. 

  15. TreeNetViz: revealing patterns of networks over tree structures.

    Science.gov (United States)

    Gou, Liang; Zhang, Xiaolong Luke

    2011-12-01

    Network data often contain important attributes from various dimensions such as social affiliations and areas of expertise in a social network. If such attributes exhibit a tree structure, visualizing a compound graph consisting of tree and network structures becomes complicated. How to visually reveal patterns of a network over a tree has not been fully studied. In this paper, we propose a compound graph model, TreeNet, to support visualization and analysis of a network at multiple levels of aggregation over a tree. We also present a visualization design, TreeNetViz, to offer the multiscale and cross-scale exploration and interaction of a TreeNet graph. TreeNetViz uses a Radial, Space-Filling (RSF) visualization to represent the tree structure, a circle layout with novel optimization to show aggregated networks derived from TreeNet, and an edge bundling technique to reduce visual complexity. Our circular layout algorithm reduces both total edge-crossings and edge length and also considers hierarchical structure constraints and edge weight in a TreeNet graph. These experiments illustrate that the algorithm can reduce visual cluttering in TreeNet graphs. Our case study also shows that TreeNetViz has the potential to support the analysis of a compound graph by revealing multiscale and cross-scale network patterns. © 2011 IEEE

  16. Software-Enabled Distributed Network Governance: The PopMedNet Experience.

    Science.gov (United States)

    Davies, Melanie; Erickson, Kyle; Wyner, Zachary; Malenfant, Jessica; Rosen, Rob; Brown, Jeffrey

    2016-01-01

    The expanded availability of electronic health information has led to increased interest in distributed health data research networks. The distributed research network model leaves data with and under the control of the data holder. Data holders, network coordinating centers, and researchers have distinct needs and challenges within this model. The concerns of network stakeholders are addressed in the design and governance models of the PopMedNet software platform. PopMedNet features include distributed querying, customizable workflows, and auditing and search capabilities. Its flexible role-based access control system enables the enforcement of varying governance policies. Four case studies describe how PopMedNet is used to enforce network governance models. Trust is an essential component of a distributed research network and must be built before data partners may be willing to participate further. The complexity of the PopMedNet system must be managed as networks grow and new data, analytic methods, and querying approaches are developed. The PopMedNet software platform supports a variety of network structures, governance models, and research activities through customizable features designed to meet the needs of network stakeholders.

  17. Network software of FD-NET local network for the RT-11 operational system

    International Nuclear Information System (INIS)

    Bobyshev, A.N.; Kutsenko, V.A.; Kravtsov, A.I.; Korzhavin, A.I.; Rozhkov, A.B.; Semenov, Yu.A.; Fedotov, O.P.

    1987-01-01

    Description of software of FD-Net ring local network based on the ''Elektronika-60'' and ''MERA-60'' microcomputers as well as on SM-3, SM-4 and ''MERA-125'' minicomputers is given. FD-Net local network is aimed at automatization of complex and labour-consuming physical experiments carried out at the THEP. It permits to carry out simultaneous application of external devices, files and programs as well as data exchange between problems solved by different computers. The architecture of FD-Net network hardware is considered as well as a general structure of software. Certain modules of network software and their interaction with each other are described

  18. MetNet - In situ observational Network and Orbital platform to investigate the Martian environment

    Science.gov (United States)

    Harri, Ari-Matti; Leinonen, Jussi; Merikallio, Sini; Paton, Mark; Haukka, Harri; Polkko, Jouni

    2007-09-01

    MetNet Mars Mission is an in situ observational network and orbital platform mission to investigate the Martian environment and it has been proposed to European Space Agency in response to Call for proposals for the first planning cycle of Cosmic Vision 2015-2025 D/SCI/DJS/SV/val/21851. The MetNet Mars Mission is to be implemented in collaboration with ESA, FMI, LA, IKI and the payload providing science teams. The scope of the MetNet Mission is to deploy 16 MetNet Landers (MNLs) on the Martian surface by using inflatable descent system structures accompanied by an atmospheric sounder and data relay onboard the MetNet Orbiter (MNO), which is based on ESA Mars Express satellite platform. The MNLs are attached on the three sides of the satellite and most of the MNLs are deployed to Mars separately a few weeks prior to the arrival to Mars. The MetNet Orbiter will perform continuous atmospheric soundings thus complementing the accurate in situ observations at the Martian ground produced by the MetNet observation network, as well as the orbiter will serve as the primary data relay between the MetNet Landers and the Earth. The MNLs are equipped with a versatile science payload focused on the atmospheric science of Mars. Detailed characterisation of the Martian atmospheric circulation patterns, boundary layer phenomena, and climatological cycles, as well as interior investigations, require simultaneous in situ meteorological, seismic and magnetic measurements from networks of stations on the Martian surface. MetNet Mars Mission will also provide a crucial support for the safety of large landing missions in general and manned Mars missions in particular. Accurate knowledge of atmospheric conditions and weather data is essential to guarantee safe landings of the forthcoming Mars mission elements.

  19. Biochemical Network Stochastic Simulator (BioNetS: software for stochastic modeling of biochemical networks

    Directory of Open Access Journals (Sweden)

    Elston Timothy C

    2004-03-01

    Full Text Available Abstract Background Intrinsic fluctuations due to the stochastic nature of biochemical reactions can have large effects on the response of biochemical networks. This is particularly true for pathways that involve transcriptional regulation, where generally there are two copies of each gene and the number of messenger RNA (mRNA molecules can be small. Therefore, there is a need for computational tools for developing and investigating stochastic models of biochemical networks. Results We have developed the software package Biochemical Network Stochastic Simulator (BioNetS for efficientlyand accurately simulating stochastic models of biochemical networks. BioNetS has a graphical user interface that allows models to be entered in a straightforward manner, and allows the user to specify the type of random variable (discrete or continuous for each chemical species in the network. The discrete variables are simulated using an efficient implementation of the Gillespie algorithm. For the continuous random variables, BioNetS constructs and numerically solvesthe appropriate chemical Langevin equations. The software package has been developed to scale efficiently with network size, thereby allowing large systems to be studied. BioNetS runs as a BioSpice agent and can be downloaded from http://www.biospice.org. BioNetS also can be run as a stand alone package. All the required files are accessible from http://x.amath.unc.edu/BioNetS. Conclusions We have developed BioNetS to be a reliable tool for studying the stochastic dynamics of large biochemical networks. Important features of BioNetS are its ability to handle hybrid models that consist of both continuous and discrete random variables and its ability to model cell growth and division. We have verified the accuracy and efficiency of the numerical methods by considering several test systems.

  20. SkyNet: Modular nuclear reaction network library

    Science.gov (United States)

    Lippuner, Jonas; Roberts, Luke F.

    2017-10-01

    The general-purpose nuclear reaction network SkyNet evolves the abundances of nuclear species under the influence of nuclear reactions. SkyNet can be used to compute the nucleosynthesis evolution in all astrophysical scenarios where nucleosynthesis occurs. Any list of isotopes can be evolved and SkyNet supports various different types of nuclear reactions. SkyNet is modular, permitting new or existing physics, such as nuclear reactions or equations of state, to be easily added or modified.

  1. Earth Observations for Early Detection of Agricultural Drought in Countries at Risk: Contributions of the Famine Early Warning Systems Network (FEWS NET) (Invited)

    Science.gov (United States)

    Verdin, J. P.; Rowland, J.; Senay, G. B.; Funk, C. C.; Budde, M. E.; Husak, G. J.; Jayanthi, H.

    2013-12-01

    The Group on Earth Observations' Global Agricultural Monitoring (GEOGLAM) implementation plan emphasizes the information needs of countries at risk of food insecurity emergencies. Countries in this category are often vulnerable to disruption of agricultural production due to drought, while at the same time they lack well developed networks of in-situ observations to support early drought detection. Consequently, it is vital that Earth observations by satellites supplement those available from surface stations. The USGS, in its role as a FEWS NET implementing partner, has recently developed a number of new applications of satellite observations for this purpose. (1) In partnership with the University of California, Santa Barbara, a 30+ year time series of gridded precipitation estimates (CHIRPS) has been developed by blending NOAA GridSat B1 geostationary thermal infrared imagery with station observations using robust geostatistical methods. The core data set consists of pentadal (5-daily) accumulations from 1981-2013 at 0.05 degree spatial resolution between +/- 50 degrees latitude. Validation has been recently completed, and applications for gridded crop water balance calculations and mapping the Standardized Precipitation Index are in development. (2) Actual evapotranspiration (ETa) estimates using MODIS Land Surface Temperature (LST) data at 1-km have been successfully demonstrated using the operational Simplified Surface Energy Balance model with 8-day composites from the LPDAAC. A new, next-day latency implementation using daily LST swath data from the NASA LANCE server is in development for all the crop growing regions of the world. This ETa processing chain follows in the footsteps of (3) the expedited production of MODIS 250-meter NDVI images every five days at USGS EROS, likewise using LANCE daily swath data as input since 2010. Coverage includes Africa, Central Asia, the Middle East, Central America, and the Caribbean. (4) A surface water point monitoring

  2. VitisNet: "Omics" integration through grapevine molecular networks.

    Directory of Open Access Journals (Sweden)

    Jérôme Grimplet

    Full Text Available BACKGROUND: Genomic data release for the grapevine has increased exponentially in the last five years. The Vitis vinifera genome has been sequenced and Vitis EST, transcriptomic, proteomic, and metabolomic tools and data sets continue to be developed. The next critical challenge is to provide biological meaning to this tremendous amount of data by annotating genes and integrating them within their biological context. We have developed and validated a system of Grapevine Molecular Networks (VitisNet. METHODOLOGY/PRINCIPAL FINDINGS: The sequences from the Vitis vinifera (cv. Pinot Noir PN40024 genome sequencing project and ESTs from the Vitis genus have been paired and the 39,424 resulting unique sequences have been manually annotated. Among these, 13,145 genes have been assigned to 219 networks. The pathway sets include 88 "Metabolic", 15 "Genetic Information Processing", 12 "Environmental Information Processing", 3 "Cellular Processes", 21 "Transport", and 80 "Transcription Factors". The quantitative data is loaded onto molecular networks, allowing the simultaneous visualization of changes in the transcriptome, proteome, and metabolome for a given experiment. CONCLUSIONS/SIGNIFICANCE: VitisNet uses manually annotated networks in SBML or XML format, enabling the integration of large datasets, streamlining biological functional processing, and improving the understanding of dynamic processes in systems biology experiments. VitisNet is grounded in the Vitis vinifera genome (currently at 8x coverage and can be readily updated with subsequent updates of the genome or biochemical discoveries. The molecular network files can be dynamically searched by pathway name or individual genes, proteins, or metabolites through the MetNet Pathway database and web-portal at http://metnet3.vrac.iastate.edu/. All VitisNet files including the manual annotation of the grape genome encompassing pathway names, individual genes, their genome identifier, and chromosome

  3. Famine Early Warning Systems Network (FEWS NET) Agro-climatology Analysis Tools and Knowledge Base Products for Food Security Applications

    Science.gov (United States)

    Budde, M. E.; Rowland, J.; Anthony, M.; Palka, S.; Martinez, J.; Hussain, R.

    2017-12-01

    The U.S. Geological Survey (USGS) supports the use of Earth observation data for food security monitoring through its role as an implementing partner of the Famine Early Warning Systems Network (FEWS NET). The USGS Earth Resources Observation and Science (EROS) Center has developed tools designed to aid food security analysts in developing assumptions of agro-climatological outcomes. There are four primary steps to developing agro-climatology assumptions; including: 1) understanding the climatology, 2) evaluating current climate modes, 3) interpretation of forecast information, and 4) incorporation of monitoring data. Analysts routinely forecast outcomes well in advance of the growing season, which relies on knowledge of climatology. A few months prior to the growing season, analysts can assess large-scale climate modes that might influence seasonal outcomes. Within two months of the growing season, analysts can evaluate seasonal forecast information as indicators. Once the growing season begins, monitoring data, based on remote sensing and field information, can characterize the start of season and remain integral monitoring tools throughout the duration of the season. Each subsequent step in the process can lead to modifications of the original climatology assumption. To support such analyses, we have created an agro-climatology analysis tool that characterizes each step in the assumption building process. Satellite-based rainfall and normalized difference vegetation index (NDVI)-based products support both the climatology and monitoring steps, sea-surface temperature data and knowledge of the global climate system inform the climate modes, and precipitation forecasts at multiple scales support the interpretation of forecast information. Organizing these data for a user-specified area provides a valuable tool for food security analysts to better formulate agro-climatology assumptions that feed into food security assessments. We have also developed a knowledge

  4. MotifNet: a web-server for network motif analysis.

    Science.gov (United States)

    Smoly, Ilan Y; Lerman, Eugene; Ziv-Ukelson, Michal; Yeger-Lotem, Esti

    2017-06-15

    Network motifs are small topological patterns that recur in a network significantly more often than expected by chance. Their identification emerged as a powerful approach for uncovering the design principles underlying complex networks. However, available tools for network motif analysis typically require download and execution of computationally intensive software on a local computer. We present MotifNet, the first open-access web-server for network motif analysis. MotifNet allows researchers to analyze integrated networks, where nodes and edges may be labeled, and to search for motifs of up to eight nodes. The output motifs are presented graphically and the user can interactively filter them by their significance, number of instances, node and edge labels, and node identities, and view their instances. MotifNet also allows the user to distinguish between motifs that are centered on specific nodes and motifs that recur in distinct parts of the network. MotifNet is freely available at http://netbio.bgu.ac.il/motifnet . The website was implemented using ReactJs and supports all major browsers. The server interface was implemented in Python with data stored on a MySQL database. estiyl@bgu.ac.il or michaluz@cs.bgu.ac.il. Supplementary data are available at Bioinformatics online. © The Author 2017. Published by Oxford University Press. All rights reserved. For Permissions, please e-mail: journals.permissions@oup.com

  5. Guifi.net: Security analysis of a heterogeneous community network

    OpenAIRE

    Ramos García, Patricia

    2018-01-01

    Guifi.net is a heterogeneous community network that brings Internet to rural areas or vulnerable groups. This opens the door to many advances, but encompasses some risks as well. The aim of this project is to assess the general security of Guifi.net from tests performed on a key network element: the router. In particular, MikroTik and Ubiquiti are the most used makes in Guifi.net and hence, the target of this project. Basic, yet important, security settings are tested. On the plus side, the ...

  6. NM-Net Gigabit-based Implementation on Core Network Facilities and Network Design Hierarchy

    International Nuclear Information System (INIS)

    Raja Murzaferi Raja Moktar; Mohd Fauzi Haris; Siti Nurbahyah Hamdan

    2011-01-01

    Nuclear Malaysia computing network or NM the main backbone of internet working on operational staffs. Main network operating center or NOC is situated in Block 15 and linkup via fiber cabling to adjacent main network blocks (18, 29, 11 connections. Pre 2009 infrastructure; together to form the core networking switch. of the core network infrastructure were limited by the up link between core switches that is the Pair (UTP) Category 6 Cable. Furthermore, majority of the networking infrastructure throughout the agency were mainly built with Fast Ethernet Based specifications to date. With current research and operational tasks highly dependent on IT infrastructure that is being enabled through NM-Net, the performance NM-Net implementing gigabit-based networking system achieve optimal performance of internet networking services in the agency thus catalyze initiative. (author)

  7. CM Net heterogeneous local network of microcomputers

    International Nuclear Information System (INIS)

    Gutche, R.Kh.

    1988-01-01

    Realization of the CM Net heterogeneous local network for the PDP-11 type computers with the RT-11 operational system control is described. The main advantage of the network is the realization of virtual disks in general form including a system unit. the network can be used everywhere, where the problem on computer connection by simple interfaces is stated. 6 refs

  8. RadNet: Open network protocol for radiation data

    International Nuclear Information System (INIS)

    Rees, B.; Olson, K.; Beckes-Talcott, J.; Kadner, S.; Wenderlich, T.; Hoy, M.; Doyle, W.; Koskelo, M.

    1998-01-01

    Safeguards instrumentation is increasingly being incorporated into remote monitoring applications. In the past, vendors of radiation monitoring instruments typically provided the tools for uploading the monitoring data to a host. However, the proprietary nature of communication protocols lends itself to increased computer support needs and increased installation expenses. As a result, a working group of suppliers and customers of radiation monitoring instruments defined an open network protocol for transferring packets on a local area network from radiation monitoring equipment to network hosts. The protocol was termed RadNet. While it is now primarily used for health physics instruments, RadNet's flexibility and strength make it ideal for remote monitoring of nuclear materials. The incorporation of standard, open protocols ensures that future work will not render present work obsolete; because RadNet utilizes standard Internet protocols, and is itself a non-proprietary standard. The use of industry standards also simplifies the development and implementation of ancillary services, e.g. E-main generation or even pager systems

  9. High-Throughput and Low-Latency Network Communication with NetIO

    Science.gov (United States)

    Schumacher, Jörn; Plessl, Christian; Vandelli, Wainer

    2017-10-01

    HPC network technologies like Infiniband, TrueScale or OmniPath provide low- latency and high-throughput communication between hosts, which makes them attractive options for data-acquisition systems in large-scale high-energy physics experiments. Like HPC networks, DAQ networks are local and include a well specified number of systems. Unfortunately traditional network communication APIs for HPC clusters like MPI or PGAS exclusively target the HPC community and are not suited well for DAQ applications. It is possible to build distributed DAQ applications using low-level system APIs like Infiniband Verbs, but it requires a non-negligible effort and expert knowledge. At the same time, message services like ZeroMQ have gained popularity in the HEP community. They make it possible to build distributed applications with a high-level approach and provide good performance. Unfortunately, their usage usually limits developers to TCP/IP- based networks. While it is possible to operate a TCP/IP stack on top of Infiniband and OmniPath, this approach may not be very efficient compared to a direct use of native APIs. NetIO is a simple, novel asynchronous message service that can operate on Ethernet, Infiniband and similar network fabrics. In this paper the design and implementation of NetIO is presented and described, and its use is evaluated in comparison to other approaches. NetIO supports different high-level programming models and typical workloads of HEP applications. The ATLAS FELIX project [1] successfully uses NetIO as its central communication platform. The architecture of NetIO is described in this paper, including the user-level API and the internal data-flow design. The paper includes a performance evaluation of NetIO including throughput and latency measurements. The performance is compared against the state-of-the- art ZeroMQ message service. Performance measurements are performed in a lab environment with Ethernet and FDR Infiniband networks.

  10. NETS - A NEURAL NETWORK DEVELOPMENT TOOL, VERSION 3.0 (MACINTOSH VERSION)

    Science.gov (United States)

    Phillips, T. A.

    1994-01-01

    NETS, A Tool for the Development and Evaluation of Neural Networks, provides a simulation of Neural Network algorithms plus an environment for developing such algorithms. Neural Networks are a class of systems modeled after the human brain. Artificial Neural Networks are formed from hundreds or thousands of simulated neurons, connected to each other in a manner similar to brain neurons. Problems which involve pattern matching readily fit the class of problems which NETS is designed to solve. NETS uses the back propagation learning method for all of the networks which it creates. The nodes of a network are usually grouped together into clumps called layers. Generally, a network will have an input layer through which the various environment stimuli are presented to the network, and an output layer for determining the network's response. The number of nodes in these two layers is usually tied to some features of the problem being solved. Other layers, which form intermediate stops between the input and output layers, are called hidden layers. NETS allows the user to customize the patterns of connections between layers of a network. NETS also provides features for saving the weight values of a network during the learning process, which allows for more precise control over the learning process. NETS is an interpreter. Its method of execution is the familiar "read-evaluate-print" loop found in interpreted languages such as BASIC and LISP. The user is presented with a prompt which is the simulator's way of asking for input. After a command is issued, NETS will attempt to evaluate the command, which may produce more prompts requesting specific information or an error if the command is not understood. The typical process involved when using NETS consists of translating the problem into a format which uses input/output pairs, designing a network configuration for the problem, and finally training the network with input/output pairs until an acceptable error is reached. NETS

  11. The net effects of the Project NetWork return-to-work case management experiment on participant earnings, benefit receipt, and other outcomes.

    Science.gov (United States)

    Kornfeld, R; Rupp, K

    2000-01-01

    The Social Security Administration (SSA) initiated Project NetWork in 1991 to test case management as a means of promoting employment among persons with disabilities. The demonstration, which targeted Social Security Disability Insurance (DI) beneficiaries and Supplemental Security Income (SSI) applicants and recipients, offered intensive outreach, work-incentive waivers, and case management/referral services. Participation in Project NetWork was voluntary. Volunteers were randomly assigned to the "treatment" group or the "control" group. Those assigned to the treatment group met individually with a case or referral manager who arranged for rehabilitation and employment services, helped clients develop an individual employment plan, and provided direct employment counseling services. Volunteers assigned to the control group could not receive services from Project NetWork but remained eligible for any employment assistance already available in their communities. For both treatment and control groups, the demonstration waived specific DI and SSI program rules considered to be work disincentives. The experimental impact study thus measures the incremental effects of case and referral management services. The eight demonstration sites were successful in implementing the experimental design roughly as planned. Project NetWork staff were able to recruit large numbers of participants and to provide rehabilitation and employment services on a substantial scale. Most of the sites easily reached their enrollment targets and were able to attract volunteers with demographic characteristics similar to those of the entire SSI and DI caseload and a broad range of moderate and severe disabilities. However, by many measures, volunteers were generally more "work-ready" than project eligible in the demonstration areas who did not volunteer to receive NetWork services. Project NetWork case management increased average annual earnings by $220 per year over the first 2 years following

  12. MPIGeneNet: Parallel Calculation of Gene Co-Expression Networks on Multicore Clusters.

    Science.gov (United States)

    Gonzalez-Dominguez, Jorge; Martin, Maria J

    2017-10-10

    In this work we present MPIGeneNet, a parallel tool that applies Pearson's correlation and Random Matrix Theory to construct gene co-expression networks. It is based on the state-of-the-art sequential tool RMTGeneNet, which provides networks with high robustness and sensitivity at the expenses of relatively long runtimes for large scale input datasets. MPIGeneNet returns the same results as RMTGeneNet but improves the memory management, reduces the I/O cost, and accelerates the two most computationally demanding steps of co-expression network construction by exploiting the compute capabilities of common multicore CPU clusters. Our performance evaluation on two different systems using three typical input datasets shows that MPIGeneNet is significantly faster than RMTGeneNet. As an example, our tool is up to 175.41 times faster on a cluster with eight nodes, each one containing two 12-core Intel Haswell processors. Source code of MPIGeneNet, as well as a reference manual, are available at https://sourceforge.net/projects/mpigenenet/.

  13. RadNet Radiological Air Monitoring Network

    International Nuclear Information System (INIS)

    Scott Telofski, J.; Askren, D.R.; Petko, Ch.M.; Fraass, R.G.

    2010-01-01

    The United States Environmental Protection Agency operates a national environmental radiation monitoring program called RadNet. RadNet monitors airborne particulates, precipitation, milk, and drinking water for radiation levels. The primary purpose of the original program in the 1950's and 1960's was to collect and analyze samples in various media to assess the effects of radioactive fallout from above-ground nuclear weapon testing. As above-ground testing diminished in the 1970's, the program, especially the air network, became critical in evaluating effects of other types of nuclear incidents, such as the nuclear reactor accident at Chernobyl, as well as monitoring trends in environmental radioactive contamination. The value of rapid data collection subsequent to such incidents led to the consideration of developing air monitors with radiation detectors and telecommunication equipment for real-time radiation measurement. The strengthened United States homeland security posture after 2001 led to production and installation of the current real-time RadNet air monitors. There are now 118 stationary, continuously operating air monitoring stations and 40 mobile air monitors for site specific monitoring. The stationary air monitors include radiation detectors, meteorological sensors, a high-volume air sampler, and communication devices for hourly data transfers. When unusual levels are detected, scientists download a full sodium iodide detector spectrum for analysis. The real-time data collected by RadNet stationary systems permit rapid identification and quantification of airborne nuclides with sufficient sensitivity to provide critical information to help determine protective actions. The data also may help to rapidly refine long-range radioactive plume models and estimate exposure to the population. This paper provides an overview of the airborne particulate monitoring conducted during above-ground nuclear weapon testing, summarizes the uses of data from the program

  14. NET: a new framework for the vectorization and examination of network data.

    Science.gov (United States)

    Lasser, Jana; Katifori, Eleni

    2017-01-01

    The analysis of complex networks both in general and in particular as pertaining to real biological systems has been the focus of intense scientific attention in the past and present. In this paper we introduce two tools that provide fast and efficient means for the processing and quantification of biological networks like Drosophila tracheoles or leaf venation patterns: the Network Extraction Tool ( NET ) to extract data and the Graph-edit-GUI ( GeGUI ) to visualize and modify networks. NET is especially designed for high-throughput semi-automated analysis of biological datasets containing digital images of networks. The framework starts with the segmentation of the image and then proceeds to vectorization using methodologies from optical character recognition. After a series of steps to clean and improve the quality of the extracted data the framework produces a graph in which the network is represented only by its nodes and neighborhood-relations. The final output contains information about the adjacency matrix of the graph, the width of the edges and the positions of the nodes in space. NET also provides tools for statistical analysis of the network properties, such as the number of nodes or total network length. Other, more complex metrics can be calculated by importing the vectorized network to specialized network analysis packages. GeGUI is designed to facilitate manual correction of non-planar networks as these may contain artifacts or spurious junctions due to branches crossing each other. It is tailored for but not limited to the processing of networks from microscopy images of Drosophila tracheoles. The networks extracted by NET closely approximate the network depicted in the original image. NET is fast, yields reproducible results and is able to capture the full geometry of the network, including curved branches. Additionally GeGUI allows easy handling and visualization of the networks.

  15. Africa-wide monitoring of small surface water bodies using multisource satellite data: a monitoring system for FEWS NET: chapter 5

    Science.gov (United States)

    Velpuri, Naga Manohar; Senay, Gabriel B.; Rowland, James; Verdin, James P.; Alemu, Henok; Melesse, Assefa M.; Abtew, Wossenu; Setegn, Shimelis G.

    2014-01-01

    Continental Africa has the highest volume of water stored in wetlands, large lakes, reservoirs, and rivers, yet it suffers from problems such as water availability and access. With climate change intensifying the hydrologic cycle and altering the distribution and frequency of rainfall, the problem of water availability and access will increase further. Famine Early Warning Systems Network (FEWS NET) funded by the United States Agency for International Development (USAID) has initiated a large-scale project to monitor small to medium surface water points in Africa. Under this project, multisource satellite data and hydrologic modeling techniques are integrated to monitor several hundreds of small to medium surface water points in Africa. This approach has been already tested to operationally monitor 41 water points in East Africa. The validation of modeled scaled depths with field-installed gauge data demonstrated the ability of the model to capture both the spatial patterns and seasonal variations. Modeled scaled estimates captured up to 60 % of the observed gauge variability with a mean root-mean-square error (RMSE) of 22 %. The data on relative water level, precipitation, and evapotranspiration (ETo) for water points in East and West Africa were modeled since 1998 and current information is being made available in near-real time. This chapter presents the approach, results from the East African study, and the first phase of expansion activities in the West Africa region. The water point monitoring network will be further expanded to cover much of sub-Saharan Africa. The goal of this study is to provide timely information on the water availability that would support already established FEWS NET activities in Africa. This chapter also presents the potential improvements in modeling approach to be implemented during future expansion in Africa.

  16. Eleven years of net network research activity - inr contributions

    International Nuclear Information System (INIS)

    Deaconu, V.; Ionita, I.; Meleg, T.; Deaconu, M.; Truta, C.; Oncioiu, G.

    2013-01-01

    The European Network on Neutron Techniques Standardization for Structural Integrity (NeT) was established in 2002, grouping institutions from industry, research and academic media. Coordinated by the European Commission.s Joint Research Centre, the main mission of this network is to develop experimental and numerical techniques and standards for the reliable characterisation of residual stresses in structural welds. Each problem is tackled by creating a dedicated Task Group which manages measurement and modelling round robin studies and undertakes a thorough analysis and interpretation of the results. Over forty institutions are active NeT partners, their specific involvement and contributions being summarised in this paper. The Institute for Nuclear Research Pitesti (INR) is one of NeT founders and its contribution is related to numerical modelling, specimen analysis, material characterisation, data analysis or SANS support. This is also emphasised throughout this paper, together with the specific NeT research topics presentation. (authors)

  17. NETS - A NEURAL NETWORK DEVELOPMENT TOOL, VERSION 3.0 (MACHINE INDEPENDENT VERSION)

    Science.gov (United States)

    Baffes, P. T.

    1994-01-01

    NETS, A Tool for the Development and Evaluation of Neural Networks, provides a simulation of Neural Network algorithms plus an environment for developing such algorithms. Neural Networks are a class of systems modeled after the human brain. Artificial Neural Networks are formed from hundreds or thousands of simulated neurons, connected to each other in a manner similar to brain neurons. Problems which involve pattern matching readily fit the class of problems which NETS is designed to solve. NETS uses the back propagation learning method for all of the networks which it creates. The nodes of a network are usually grouped together into clumps called layers. Generally, a network will have an input layer through which the various environment stimuli are presented to the network, and an output layer for determining the network's response. The number of nodes in these two layers is usually tied to some features of the problem being solved. Other layers, which form intermediate stops between the input and output layers, are called hidden layers. NETS allows the user to customize the patterns of connections between layers of a network. NETS also provides features for saving the weight values of a network during the learning process, which allows for more precise control over the learning process. NETS is an interpreter. Its method of execution is the familiar "read-evaluate-print" loop found in interpreted languages such as BASIC and LISP. The user is presented with a prompt which is the simulator's way of asking for input. After a command is issued, NETS will attempt to evaluate the command, which may produce more prompts requesting specific information or an error if the command is not understood. The typical process involved when using NETS consists of translating the problem into a format which uses input/output pairs, designing a network configuration for the problem, and finally training the network with input/output pairs until an acceptable error is reached. NETS

  18. Stochastic petri nets for wireless networks

    CERN Document Server

    Lei, Lei; Zhong, Zhangdui

    2015-01-01

    This SpringerBrief presents research in the application of Stochastic Petri Nets (SPN) to the performance evaluation of wireless networks under bursty traffic. It covers typical Quality-of-Service performance metrics such as mean throughput, average delay and packet dropping probability. Along with an introduction of SPN basics, the authors introduce the key motivation and challenges of using SPN to analyze the resource sharing performance in wireless networks. The authors explain two powerful modeling techniques that treat the well-known state space explosion problem: model decomposition and

  19. WaterNet: The NASA water cycle solutions network - Danubian regional applications

    International Nuclear Information System (INIS)

    Matthews, Dave; Brilly, Mitja; Kobold, Mira; Zagar, Mark; Houser, Paul

    2008-01-01

    WaterNet is a new international network of researchers, stakeholders, and end-users of remote sensing tools that will benefit the water resources management community. This paper provides an overview and it discusses the concept of solutions networks focusing on the WaterNet. It invites Danubian research and applications teams to join our WaterNet network. The NASA Water cycle Solutions Network's goal is to improve and optimize the sustained ability of water cycle researchers, stakeholders, organizations and networks to interact, identify, harness, and extend NASA research results to augment decision support tools and meet national needs. Our team will develop WaterNet by engaging relevant NASA water cycle research resources and community-of-practice organizations, to develop what we term an 'actionable database' that can be used to communicate and connect NASA Water cycle research Results (NWRs) towards the improvement of water-related Decision Support Tools (DSTs). Recognizing that the European Commission and European Space Agency have also developed many related Water Research products (EWRs), we seek to learn about these and network with the EU teams to include their information in the WaterNet actionable data base and Community of Practice. WaterNet will then develop strategies to connect researchers and decision-makers via innovative communication strategies, improved user access to NASA and EU - Danubian resources, improved water cycle research community appreciation for user requirements, improved policymaker, management and stakeholder knowledge of research and application products, and improved identification of pathways for progress. Finally, WaterNet will develop relevant benchmarking and metrics, to understand the network's characteristics, to optimize its performance, and to establish sustainability. This paper provides examples of several NASA products based on remote sensing and land data assimilation systems that integrate remotely sensed and in

  20. Desert Net-Structure and Aims of an International Network for Desertification Research

    International Nuclear Information System (INIS)

    Akhtar-Schuster, M.; San Juan Mesonada, C.

    2009-01-01

    Desert Net://www.european-desert net.eu) is an interdisciplinary scientific network which was established in October 2006 at the UN premises in Bonn, Germany, by a group of international scientists. The network strives to generate and enhance scientific knowledge and understanding of the biophysical and socio-economic processes of desertification. This international scientific network provides an international platform for scientifically based discussions and exchange of ideas, addressing knowledge gaps, and identifying research areas. Desert Net is also a think tank community which identifies issues and priorities for the sustainable development of dry lands. the paper outlines the current role of Desert Net in the international scientific community and it delineates its role to strengthen the Science/Policy Interface. (Author) 2 refs.

  1. Saver.net lidar network in southern South America

    Science.gov (United States)

    Ristori, Pablo; Otero, Lidia; Jin, Yoshitaka; Barja, Boris; Shimizu, Atsushi; Barbero, Albane; Salvador, Jacobo; Bali, Juan Lucas; Herrera, Milagros; Etala, Paula; Acquesta, Alejandro; Quel, Eduardo; Sugimoto, Nobuo; Mizuno, Akira

    2018-04-01

    The South American Environmental Risk Management Network (SAVER-Net) is an instrumentation network, mainly composed by lidars, to provide real-time information for atmospheric hazards and risk management purposes in South America. This lidar network have been developed since 2012 and all its sampling points are expected to be fully implemented by 2017. This paper describes the network's status and configuration, the data acquisition and processing scheme (protocols and data levels), as well as some aspects of the scientific networking in Latin American Lidar Network (LALINET). Similarly, the paper lays out future plans on the operation and integration to major international collaborative efforts.

  2. CMRegNet-An interspecies reference database for corynebacterial and mycobacterial regulatory networks

    DEFF Research Database (Denmark)

    Abreu, Vinicius A C; Almeida, Sintia; Tiwari, Sandeep

    2015-01-01

    gene regulatory network can lead to various practical applications, creating a greater understanding of how organisms control their cellular behavior. DESCRIPTION: In this work, we present a new database, CMRegNet for the gene regulatory networks of Corynebacterium glutamicum ATCC 13032......Net to date the most comprehensive database of regulatory interactions of CMNR bacteria. The content of CMRegNet is publicly available online via a web interface found at http://lgcm.icb.ufmg.br/cmregnet ....

  3. Structural influence of gene networks on their inference: analysis of C3NET

    Directory of Open Access Journals (Sweden)

    Emmert-Streib Frank

    2011-06-01

    Full Text Available Abstract Background The availability of large-scale high-throughput data possesses considerable challenges toward their functional analysis. For this reason gene network inference methods gained considerable interest. However, our current knowledge, especially about the influence of the structure of a gene network on its inference, is limited. Results In this paper we present a comprehensive investigation of the structural influence of gene networks on the inferential characteristics of C3NET - a recently introduced gene network inference algorithm. We employ local as well as global performance metrics in combination with an ensemble approach. The results from our numerical study for various biological and synthetic network structures and simulation conditions, also comparing C3NET with other inference algorithms, lead a multitude of theoretical and practical insights into the working behavior of C3NET. In addition, in order to facilitate the practical usage of C3NET we provide an user-friendly R package, called c3net, and describe its functionality. It is available from https://r-forge.r-project.org/projects/c3net and from the CRAN package repository. Conclusions The availability of gene network inference algorithms with known inferential properties opens a new era of large-scale screening experiments that could be equally beneficial for basic biological and biomedical research with auspicious prospects. The availability of our easy to use software package c3net may contribute to the popularization of such methods. Reviewers This article was reviewed by Lev Klebanov, Joel Bader and Yuriy Gusev.

  4. cooccurNet: an R package for co-occurrence network construction and analysis.

    Science.gov (United States)

    Zou, Yuanqiang; Wu, Zhiqiang; Deng, Lizong; Wu, Aiping; Wu, Fan; Li, Kenli; Jiang, Taijiao; Peng, Yousong

    2017-06-15

    Previously, we developed a computational model to identify genomic co-occurrence networks that was applied to capture the coevolution patterns within genomes of influenza viruses. To facilitate easy public use of this model, an R package 'cooccurNet' is presented here. 'cooccurNet' includes functionalities of construction and analysis of residues (e.g. nucleotides, amino acids and SNPs) co-occurrence network. In addition, a new method for measuring residues coevolution, defined as residue co-occurrence score (RCOS), is proposed and implemented in 'cooccurNet' based on the co-occurrence network. 'cooccurNet' is publicly available on CRAN repositories under the GPL-3 Open Source License ( http://cran.r-project.org/package=cooccurNet ). taijiao@ibms.pumc.edu.cn or pys2013@hnu.edu.cn. Supplementary data are available at Bioinformatics online. © The Author 2017. Published by Oxford University Press. All rights reserved. For Permissions, please e-mail: journals.permissions@oup.com

  5. 75 FR 65363 - Basic Behavioral and Social Science Opportunity Network (OppNet)

    Science.gov (United States)

    2010-10-22

    ... public meeting to promote and publicize the Basic Behavioral and Social Science Opportunity Network (Opp... . Background: The Basic Behavioral and Social Science Opportunity Network (OppNet) is a trans-NIH initiative to expand the agency's funding of basic behavioral and social sciences research (b-BSSR). OppNet prioritizes...

  6. DyNet: visualization and analysis of dynamic molecular interaction networks.

    Science.gov (United States)

    Goenawan, Ivan H; Bryan, Kenneth; Lynn, David J

    2016-09-01

    : The ability to experimentally determine molecular interactions on an almost proteome-wide scale under different conditions is enabling researchers to move from static to dynamic network analysis, uncovering new insights into how interaction networks are physically rewired in response to different stimuli and in disease. Dynamic interaction data presents a special challenge in network biology. Here, we present DyNet, a Cytoscape application that provides a range of functionalities for the visualization, real-time synchronization and analysis of large multi-state dynamic molecular interaction networks enabling users to quickly identify and analyze the most 'rewired' nodes across many network states. DyNet is available at the Cytoscape (3.2+) App Store (http://apps.cytoscape.org/apps/dynet). david.lynn@sahmri.com Supplementary data are available at Bioinformatics online. © The Author 2016. Published by Oxford University Press.

  7. NM-Net Gigabit-based Implementation on Core Network Facilities and Performance Design Hierarchy

    International Nuclear Information System (INIS)

    Raja Murzaferi Raja Moktar; Mohd Fauzi Haris; Siti Nurbahyah Hamdan

    2013-01-01

    Nuclear Malaysia computing network or NM-net has been gradually developed since 1990s. Since then it has been the main backbone of inter networking on agency's IT infrastructure, serving users ranging from researchers to operational staffs. Main network operating center or NOC is situated in Block 15 and linkup via fiber or UTP cabling to adjacent main network blocks (18, 29, 11 and 44-Dengkil) and later to other blocks enabling network connections. In 2009 the main core network has been built up form several switches up link to form the main networking switch, while on the adjacent main block networks are mainly based on fast Ethernet technology . With current research and operational tasks highly dependent on IT infrastructure that is being enabled through NM-Net, the performance of the infrastructure are most critical. This paper will discuss NM-Net implementing gigabit-based networking system and performance network design hierarchy in order to achieve highest availability of inter networking services in the agency thus catalyzing Nuclear Malaysia future research initiative. (author)

  8. ISTA-Net: Iterative Shrinkage-Thresholding Algorithm Inspired Deep Network for Image Compressive Sensing

    KAUST Repository

    Zhang, Jian; Ghanem, Bernard

    2017-01-01

    and the performance/speed of network-based ones. We propose a novel structured deep network, dubbed ISTA-Net, which is inspired by the Iterative Shrinkage-Thresholding Algorithm (ISTA) for optimizing a general $l_1$ norm CS reconstruction model. ISTA-Net essentially

  9. Timed-Arc Petri Nets vs. Networks of Timed Automata

    DEFF Research Database (Denmark)

    Srba, Jiri

    We establish mutual translations between the classes of 1-safe timed-arc Petri nets (and its extension with testing arcs) and networks of timed automata (and its subclass where every clock used in the guard has to be reset). The presented translations are very tight (up to isomorphism of labelled...... transition systems with time). This provides a convenient characterization from the theoretical point of view but is not always satisfactory from the practical point of view because of the possible non-polynomial blow up in the size (in the direction from automata to nets). Hence we relax the isomorphism...... requirement and provide efficient (polynomial time) reductions between networks of timed automata and 1-safe timed-arc Petri nets preserving the answer to the reachability question. This makes our techniques suitable for automatic translation into a format required by tools like UPPAAL and KRONOS. A direct...

  10. NetBench. Automated Network Performance Testing

    CERN Document Server

    Cadeddu, Mattia

    2016-01-01

    In order to evaluate the operation of high performance routers, CERN has developed the NetBench software to run benchmarking tests by injecting various traffic patterns and observing the network devices behaviour in real-time. The tool features a modular design with a Python based console used to inject traffic and collect the results in a database, and a web user

  11. Saver.net lidar network in southern South America

    Directory of Open Access Journals (Sweden)

    Ristori Pablo

    2018-01-01

    Full Text Available The South American Environmental Risk Management Network (SAVER-Net is an instrumentation network, mainly composed by lidars, to provide real-time information for atmospheric hazards and risk management purposes in South America. This lidar network have been developed since 2012 and all its sampling points are expected to be fully implemented by 2017. This paper describes the network’s status and configuration, the data acquisition and processing scheme (protocols and data levels, as well as some aspects of the scientific networking in Latin American Lidar Network (LALINET. Similarly, the paper lays out future plans on the operation and integration to major international collaborative efforts.

  12. ISTA-Net: Iterative Shrinkage-Thresholding Algorithm Inspired Deep Network for Image Compressive Sensing

    KAUST Repository

    Zhang, Jian

    2017-06-24

    Traditional methods for image compressive sensing (CS) reconstruction solve a well-defined inverse problem that is based on a predefined CS model, which defines the underlying structure of the problem and is generally solved by employing convergent iterative solvers. These optimization-based CS methods face the challenge of choosing optimal transforms and tuning parameters in their solvers, while also suffering from high computational complexity in most cases. Recently, some deep network based CS algorithms have been proposed to improve CS reconstruction performance, while dramatically reducing time complexity as compared to optimization-based methods. Despite their impressive results, the proposed networks (either with fully-connected or repetitive convolutional layers) lack any structural diversity and they are trained as a black box, void of any insights from the CS domain. In this paper, we combine the merits of both types of CS methods: the structure insights of optimization-based method and the performance/speed of network-based ones. We propose a novel structured deep network, dubbed ISTA-Net, which is inspired by the Iterative Shrinkage-Thresholding Algorithm (ISTA) for optimizing a general $l_1$ norm CS reconstruction model. ISTA-Net essentially implements a truncated form of ISTA, where all ISTA-Net parameters are learned end-to-end to minimize a reconstruction error in training. Borrowing more insights from the optimization realm, we propose an accelerated version of ISTA-Net, dubbed FISTA-Net, which is inspired by the fast iterative shrinkage-thresholding algorithm (FISTA). Interestingly, this acceleration naturally leads to skip connections in the underlying network design. Extensive CS experiments demonstrate that the proposed ISTA-Net and FISTA-Net outperform existing optimization-based and network-based CS methods by large margins, while maintaining a fast runtime.

  13. Nordic network of meteorological services engaged in nuclear preparedness - NKS-MetNet

    Energy Technology Data Exchange (ETDEWEB)

    Persson, C; Kolax, M [Swedish Meteorological and Hydrological Institute, SHMI (Sweden); Baklanov, A; Soerensen, Jens H [Danish Meteorological Institute, DMI (Denmark); Sofiev, M; Valkama, I [Finnish Meteorological Institute, FMI (Finland); Karlsdottier, S [Icelandic Meteorological Office, IMO (Ireland); Bartnicki, J; Saltbones, J [Norwegian Meteorological Institute, met.no (Norway)

    2007-03-15

    The current NKS-MetNet project was initiated to strengthen the Nordic collaboration within the field of real-time atmospheric transport modelling for nuclear emergency preparedness and to improve its contacts to the Nordic radiation protection authorities. A backup facility for the network has been established regarding exchange of operational real-time long-range dispersion model calculations. The facility consists of national password protected Web sites, at which some few basic results (maps) of atmospheric dispersion model calculations (forecasts) in emergency situations (or exercises) can be made available to the network. Technical problems at one institute will not influence the calculations or presentations from the other participants, which makes the system robust. The project has fulfilled its main harmonization goal by bringing the Nordic emergency modelling towards more unified approaches of the presentations of results and introduced a voluntary unification of the model output formats. It was left optional to upload raw data in a format enabling import into one of the Decision Support System (DSS) ARGOS or RODOS. However, implementation of either of these formats is feasible only in case of availability and utilization of the systems by the end-users in the specific country. Within the Nordic countries to-date most but not all of the models are capable of producing the ARGOS-compatible results. Another format of the output data supported by almost all MetNet participants is ENSEMBLE a standard developed within the scope of the EC ENSEMBLE project that currently continues on a voluntary basis, regulated by a joint MoU, and covers nearly all European emergency-engaged services. It seems to be feasible to keep the Nordic network of MetNet Web sites also in a near future and continue its development regardless of presence of a third-party large-scale DSS, whether it is ARGOS, RODOS, ENSEMBLE or any other. Foreseen future close cooperation of the

  14. Nordic network of meteorological services engaged in nuclear preparedness - NKS-MetNet

    International Nuclear Information System (INIS)

    Persson, C.; Kolax, M.; Baklanov, A.; Soerensen, Jens H.; Sofiev, M.; Valkama, I.; Karlsdottier, S.; Bartnicki, J.; Saltbones, J.

    2007-03-01

    The current NKS-MetNet project was initiated to strengthen the Nordic collaboration within the field of real-time atmospheric transport modelling for nuclear emergency preparedness and to improve its contacts to the Nordic radiation protection authorities. A backup facility for the network has been established regarding exchange of operational real-time long-range dispersion model calculations. The facility consists of national password protected Web sites, at which some few basic results (maps) of atmospheric dispersion model calculations (forecasts) in emergency situations (or exercises) can be made available to the network. Technical problems at one institute will not influence the calculations or presentations from the other participants, which makes the system robust. The project has fulfilled its main harmonization goal by bringing the Nordic emergency modelling towards more unified approaches of the presentations of results and introduced a voluntary unification of the model output formats. It was left optional to upload raw data in a format enabling import into one of the Decision Support System (DSS) ARGOS or RODOS. However, implementation of either of these formats is feasible only in case of availability and utilization of the systems by the end-users in the specific country. Within the Nordic countries to-date most but not all of the models are capable of producing the ARGOS-compatible results. Another format of the output data supported by almost all MetNet participants is ENSEMBLE a standard developed within the scope of the EC ENSEMBLE project that currently continues on a voluntary basis, regulated by a joint MoU, and covers nearly all European emergency-engaged services. It seems to be feasible to keep the Nordic network of MetNet Web sites also in a near future and continue its development regardless of presence of a third-party large-scale DSS, whether it is ARGOS, RODOS, ENSEMBLE or any other. Foreseen future close cooperation of the

  15. SeaDataNet network services monitoring: Definition and Implementation of Service availability index

    Science.gov (United States)

    Lykiardopoulos, Angelos; Mpalopoulou, Stavroula; Vavilis, Panagiotis; Pantazi, Maria; Iona, Sissy

    2014-05-01

    SeaDataNet (SDN) is a standardized system for managing large and diverse data sets collected by the oceanographic fleets and the automatic observation systems. The SeaDataNet network is constituted of national oceanographic data centres of 35 countries, active in data collection. SeaDataNetII project's objective is to upgrade the present SeaDataNet infrastructure into an operationally robust and state-of-the-art infrastructure; therefore Network Monitoring is a step to this direction. The term Network Monitoring describes the use of system that constantly monitors a computer network for slow or failing components and that notifies the network administrator in case of outages. Network monitoring is crucial when implementing widely distributed systems over the Internet and in real-time systems as it detects malfunctions that may occur and notifies the system administrator who can immediately respond and correct the problem. In the framework of SeaDataNet II project a monitoring system was developed in order to monitor the SeaDataNet components. The core system is based on Nagios software. Some plug-ins were developed to support SeaDataNet modules. On the top of Nagios Engine a web portal was developed in order to give access to local administrators of SeaDataNet components, to view detailed logs of their own service(s). Currently the system monitors 35 SeaDataNet Download Managers, 9 SeaDataNet Services, 25 GeoSeas Download Managers and 23 UBSS Download Managers . Taking advantage of the continuous monitoring of SeaDataNet system components a total availability index will be implemented. The term availability can be defined as the ability of a functional unit to be in a state to perform a required function under given conditions at a given instant of time or over a given time interval, assuming that the required external resources are provided. Availability measures can be considered as a are very important benefit becauseT - The availability trends that can be

  16. Development of Network Interface Cards for TRIDAQ systems with the NaNet framework

    International Nuclear Information System (INIS)

    Ammendola, R.; Biagioni, A.; Cretaro, P.; Frezza, O.; Cicero, F. Lo; Lonardo, A.; Martinelli, M.; Paolucci, P.S.; Pastorelli, E.; Simula, F.; Valente, P.; Vicini, P.; Lorenzo, S. Di; Piandani, R.; Pontisso, L.; Sozzi, M.; Fiorini, M.; Neri, I.; Lamanna, G.; Rossetti, D.

    2017-01-01

    NaNet is a framework for the development of FPGA-based PCI Express (PCIe) Network Interface Cards (NICs) with real-time data transport architecture that can be effectively employed in TRIDAQ systems. Key features of the architecture are the flexibility in the configuration of the number and kind of the I/O channels, the hardware offloading of the network protocol stack, the stream processing capability, and the zero-copy CPU and GPU Remote Direct Memory Access (RDMA). Three NIC designs have been developed with the NaNet framework: NaNet-1 and NaNet-10 for the CERN NA62 low level trigger and NaNet 3 for the KM3NeT-IT underwater neutrino telescope DAQ system. We will focus our description on the NaNet-10 design, as it is the most complete of the three in terms of capabilities and integrated IPs of the framework.

  17. CoryneRegNet 4.0 – A reference database for corynebacterial gene regulatory networks

    Directory of Open Access Journals (Sweden)

    Baumbach Jan

    2007-11-01

    Full Text Available Abstract Background Detailed information on DNA-binding transcription factors (the key players in the regulation of gene expression and on transcriptional regulatory interactions of microorganisms deduced from literature-derived knowledge, computer predictions and global DNA microarray hybridization experiments, has opened the way for the genome-wide analysis of transcriptional regulatory networks. The large-scale reconstruction of these networks allows the in silico analysis of cell behavior in response to changing environmental conditions. We previously published CoryneRegNet, an ontology-based data warehouse of corynebacterial transcription factors and regulatory networks. Initially, it was designed to provide methods for the analysis and visualization of the gene regulatory network of Corynebacterium glutamicum. Results Now we introduce CoryneRegNet release 4.0, which integrates data on the gene regulatory networks of 4 corynebacteria, 2 mycobacteria and the model organism Escherichia coli K12. As the previous versions, CoryneRegNet provides a web-based user interface to access the database content, to allow various queries, and to support the reconstruction, analysis and visualization of regulatory networks at different hierarchical levels. In this article, we present the further improved database content of CoryneRegNet along with novel analysis features. The network visualization feature GraphVis now allows the inter-species comparisons of reconstructed gene regulatory networks and the projection of gene expression levels onto that networks. Therefore, we added stimulon data directly into the database, but also provide Web Service access to the DNA microarray analysis platform EMMA. Additionally, CoryneRegNet now provides a SOAP based Web Service server, which can easily be consumed by other bioinformatics software systems. Stimulons (imported from the database, or uploaded by the user can be analyzed in the context of known

  18. NetRaVE: constructing dependency networks using sparse linear regression

    DEFF Research Database (Denmark)

    Phatak, A.; Kiiveri, H.; Clemmensen, Line Katrine Harder

    2010-01-01

    NetRaVE is a small suite of R functions for generating dependency networks using sparse regression methods. Such networks provide an alternative to interpreting 'top n lists' of genes arising out of an analysis of microarray data, and they provide a means of organizing and visualizing the resulting...

  19. An Efficient Translation of Timed-Arc Petri Nets to Networks of Timed Automata

    DEFF Research Database (Denmark)

    Byg, Joakim; Jørgensen, Kenneth Yrke; Srba, Jiri

    2009-01-01

    Bounded timed-arc Petri nets with read-arcs were recently proven equivalent to networks of timed automata, though the Petri net model cannot express urgent behaviour and the described mutual trans- lations are rather inefficient. We propose an extension of timed-arc Petri nets with invariants...... to enforce urgency and with transport arcs to generalise the read-arcs. We also describe a novel translation from the extended timed-arc Petri net model to networks of timed automata. The translation is implemented in the tool TAPAAL and it uses UPPAAL as the verification engine. Our experiments confirm...... the efficiency of the translation and in some cases the translated models verify significantly faster than the native UPPAAL models do....

  20. [SOPHO-NET - a research network on psychotherapy for social phobia].

    Science.gov (United States)

    Leichsenring, Falk; Salzer, Simone; Beutel, Manfred E; von Consbruch, Katrin; Herpertz, Stephan; Hiller, Wolfgang; Hoyer, Jürgen; Hüsing, Johannes; Irle, Eva; Joraschky, Peter; Konnopka, Alexander; König, Hans-Helmut; de Liz, Therese; Nolting, Björn; Pöhlmann, Karin; Ruhleder, Mirjana; Schauenburg, Henning; Stangier, Ulrich; Strauss, Bernhard; Subic-Wrana, Claudia; Vormfelde, Stefan V; Weniger, Godehard; Willutzki, Ulrike; Wiltink, Jörg; Leibing, Eric

    2009-01-01

    This paper presents the Social Phobia Psychotherapy Research Network (SOPHO-NET). SOPHO-NET is among the five research networks on psychotherapy funded by "Bundesministerium für Bildung und Forschung". The research program encompasses a coordinated group of studies of social phobia. In the central project (Study A), a multi-center randomized controlled trial, refined models of manualized cognitive-behavioral therapy (CBT) and manualized short-term psychodynamic psychotherapy (STPP) are compared in the treatment of social phobia. A sample of n=512 outpatients will be randomized to either CBT, STPP or wait list. For quality assurance and treatment integrity, a specific project has been established (Project Q). Study A is complemented by four interrelated projects focusing on attachment style (Study B1), cost-effectiveness (Study B2), polymorphisms in the serotonin transporter gene (Study C1) and on structural and functional deviations of hippocampus and amygdala (Study C2). Thus, the SOPHO-NET program allows for a highly interdisciplinary research of psychotherapy in social phobia.

  1. Generating Southern Africa Precipitation Forecast Using the FEWS Engine, a New Application for the Google Earth Engine

    Science.gov (United States)

    Landsfeld, M. F.; Hegewisch, K.; Daudert, B.; Morton, C.; Husak, G. J.; Friedrichs, M.; Funk, C. C.; Huntington, J. L.; Abatzoglou, J. T.; Verdin, J. P.

    2016-12-01

    The Famine Early Warning Systems Network (FEWS NET) focuses on food insecurity in developing nations and provides objective, evidence-based analysis to help government decision-makers and relief agencies plan for and respond to humanitarian emergencies. The network of FEWS NET analysts and scientists require flexible, interactive tools to aid in their monitoring and research efforts. Because they often work in bandwidth-limited regions, lightweight Internet tools and services that bypass the need for downloading massive datasets are preferred for their work. To support food security analysis FEWS NET developed a custom interface for the Google Earth Engine (GEE). GEE is a platform developed by Google to support scientific analysis of environmental data in their cloud computing environment. This platform allows scientists and independent researchers to mine massive collections of environmental data, leveraging Google's vast computational resources for purposes of detecting changes and monitoring the Earth's surface and climate. GEE hosts an enormous amount of satellite imagery and climate archives, one of which is the Climate Hazards Group Infrared Precipitation with Stations dataset (CHIRPS). CHIRPS precipitation dataset is a key input for FEWS NET monitoring and forecasting efforts. In this talk we introduce the FEWS Engine interface. We present an application that highlights the utility of FEWS Engine for forecasting the upcoming seasonal precipitation of southern Africa. Specifically, the current state of ENSO is assessed and used to identify similar historical seasons. The FEWS Engine compositing tool is used to examine rainfall and other environmental data for these analog seasons. The application illustrates the unique benefits of using FEWS Engine for on-the-fly food security scenario development.

  2. BrainNetVis: analysis and visualization of brain functional networks.

    Science.gov (United States)

    Tsiaras, Vassilis; Andreou, Dimitris; Tollis, Ioannis G

    2009-01-01

    BrainNetVis is an application, written in Java, that displays and analyzes synchronization networks from brain signals. The program implements a number of network indices and visualization techniques. We demonstrate its use through a case study of left hand and foot motor imagery. The data sets were provided by the Berlin BCI group. Using this program we managed to find differences between the average left hand and foot synchronization networks by comparing them with the average idle state synchronization network.

  3. BrainNet Viewer: a network visualization tool for human brain connectomics.

    Science.gov (United States)

    Xia, Mingrui; Wang, Jinhui; He, Yong

    2013-01-01

    The human brain is a complex system whose topological organization can be represented using connectomics. Recent studies have shown that human connectomes can be constructed using various neuroimaging technologies and further characterized using sophisticated analytic strategies, such as graph theory. These methods reveal the intriguing topological architectures of human brain networks in healthy populations and explore the changes throughout normal development and aging and under various pathological conditions. However, given the huge complexity of this methodology, toolboxes for graph-based network visualization are still lacking. Here, using MATLAB with a graphical user interface (GUI), we developed a graph-theoretical network visualization toolbox, called BrainNet Viewer, to illustrate human connectomes as ball-and-stick models. Within this toolbox, several combinations of defined files with connectome information can be loaded to display different combinations of brain surface, nodes and edges. In addition, display properties, such as the color and size of network elements or the layout of the figure, can be adjusted within a comprehensive but easy-to-use settings panel. Moreover, BrainNet Viewer draws the brain surface, nodes and edges in sequence and displays brain networks in multiple views, as required by the user. The figure can be manipulated with certain interaction functions to display more detailed information. Furthermore, the figures can be exported as commonly used image file formats or demonstration video for further use. BrainNet Viewer helps researchers to visualize brain networks in an easy, flexible and quick manner, and this software is freely available on the NITRC website (www.nitrc.org/projects/bnv/).

  4. BrainNet Viewer: a network visualization tool for human brain connectomics.

    Directory of Open Access Journals (Sweden)

    Mingrui Xia

    Full Text Available The human brain is a complex system whose topological organization can be represented using connectomics. Recent studies have shown that human connectomes can be constructed using various neuroimaging technologies and further characterized using sophisticated analytic strategies, such as graph theory. These methods reveal the intriguing topological architectures of human brain networks in healthy populations and explore the changes throughout normal development and aging and under various pathological conditions. However, given the huge complexity of this methodology, toolboxes for graph-based network visualization are still lacking. Here, using MATLAB with a graphical user interface (GUI, we developed a graph-theoretical network visualization toolbox, called BrainNet Viewer, to illustrate human connectomes as ball-and-stick models. Within this toolbox, several combinations of defined files with connectome information can be loaded to display different combinations of brain surface, nodes and edges. In addition, display properties, such as the color and size of network elements or the layout of the figure, can be adjusted within a comprehensive but easy-to-use settings panel. Moreover, BrainNet Viewer draws the brain surface, nodes and edges in sequence and displays brain networks in multiple views, as required by the user. The figure can be manipulated with certain interaction functions to display more detailed information. Furthermore, the figures can be exported as commonly used image file formats or demonstration video for further use. BrainNet Viewer helps researchers to visualize brain networks in an easy, flexible and quick manner, and this software is freely available on the NITRC website (www.nitrc.org/projects/bnv/.

  5. CellNetVis: a web tool for visualization of biological networks using force-directed layout constrained by cellular components.

    Science.gov (United States)

    Heberle, Henry; Carazzolle, Marcelo Falsarella; Telles, Guilherme P; Meirelles, Gabriela Vaz; Minghim, Rosane

    2017-09-13

    The advent of "omics" science has brought new perspectives in contemporary biology through the high-throughput analyses of molecular interactions, providing new clues in protein/gene function and in the organization of biological pathways. Biomolecular interaction networks, or graphs, are simple abstract representations where the components of a cell (e.g. proteins, metabolites etc.) are represented by nodes and their interactions are represented by edges. An appropriate visualization of data is crucial for understanding such networks, since pathways are related to functions that occur in specific regions of the cell. The force-directed layout is an important and widely used technique to draw networks according to their topologies. Placing the networks into cellular compartments helps to quickly identify where network elements are located and, more specifically, concentrated. Currently, only a few tools provide the capability of visually organizing networks by cellular compartments. Most of them cannot handle large and dense networks. Even for small networks with hundreds of nodes the available tools are not able to reposition the network while the user is interacting, limiting the visual exploration capability. Here we propose CellNetVis, a web tool to easily display biological networks in a cell diagram employing a constrained force-directed layout algorithm. The tool is freely available and open-source. It was originally designed for networks generated by the Integrated Interactome System and can be used with networks from others databases, like InnateDB. CellNetVis has demonstrated to be applicable for dynamic investigation of complex networks over a consistent representation of a cell on the Web, with capabilities not matched elsewhere.

  6. Impact of Social Networking Sites in Bangladesh: Few Possible Solutions

    OpenAIRE

    Md. Omar Faruq; Alim-Al-Reza; Md. Mahbubur Rahman; Mohammad Raisul Alam

    2017-01-01

    Bangladesh is a developing country. But in few recent years this country is going to be turned as digitalized. The first condition of being digitalization is the whole communication system of the country have to be developed tremendously. If we notice about the communication system, then Social Networking Sites can be a platform of revolution. This study is based on the perspective of Bangladesh on Social Networking Sites(SNS). In Bangladesh, Social Networking Sites ar...

  7. CoryneRegNet: an ontology-based data warehouse of corynebacterial transcription factors and regulatory networks.

    Science.gov (United States)

    Baumbach, Jan; Brinkrolf, Karina; Czaja, Lisa F; Rahmann, Sven; Tauch, Andreas

    2006-02-14

    The application of DNA microarray technology in post-genomic analysis of bacterial genome sequences has allowed the generation of huge amounts of data related to regulatory networks. This data along with literature-derived knowledge on regulation of gene expression has opened the way for genome-wide reconstruction of transcriptional regulatory networks. These large-scale reconstructions can be converted into in silico models of bacterial cells that allow a systematic analysis of network behavior in response to changing environmental conditions. CoryneRegNet was designed to facilitate the genome-wide reconstruction of transcriptional regulatory networks of corynebacteria relevant in biotechnology and human medicine. During the import and integration process of data derived from experimental studies or literature knowledge CoryneRegNet generates links to genome annotations, to identified transcription factors and to the corresponding cis-regulatory elements. CoryneRegNet is based on a multi-layered, hierarchical and modular concept of transcriptional regulation and was implemented by using the relational database management system MySQL and an ontology-based data structure. Reconstructed regulatory networks can be visualized by using the yFiles JAVA graph library. As an application example of CoryneRegNet, we have reconstructed the global transcriptional regulation of a cellular module involved in SOS and stress response of corynebacteria. CoryneRegNet is an ontology-based data warehouse that allows a pertinent data management of regulatory interactions along with the genome-scale reconstruction of transcriptional regulatory networks. These models can further be combined with metabolic networks to build integrated models of cellular function including both metabolism and its transcriptional regulation.

  8. NucNet's growing impact on the media

    Energy Technology Data Exchange (ETDEWEB)

    Carle, Remy [Electricite de France (France)

    1995-07-01

    In the four years since the birth of NucNet there has been a gradual but radical change In the original concept of the network. In the beginning, the focus of attention was to make nuclear communicators better-informed and more efficient. What had been desperately needed for some time was an Information exchange system which would enable those communicators to do a better Job whether working proactlvely or reactively. The idea was primarily for positive nuclear news from Europe to be disseminated to people on the network so that they could pass it on to media contacts in their respective countries, as part of their regular dialogue with journalists. However, once NucNet was up-and-running a strong body of opinion emerged, arguing in favour of NucNet's most urgent, important or off-beat news - the 'A' category releases - to be sent direct to national and international news agencies. Quite rightly, it was felt that, in this way, the nuclear community could clearly demonstrate Its transparency and Its desire to Inform the public openly. At the same time, it was clear that sending to just a few national news agencies in Europe would not be enough. It was clear that NucNet would have to expand into a truly worldwide network and that, to reflect this, the main International news agencies would have to be put online as well. NucNet's growing impact on the media is a result of teamwork, and this teamwork takes different forms. It is: between the network's information suppliers and Central Office, among the Central Office staff themselves, between Central Office and the agencies, and between network members and their news media contacts. Through this continuing teamwork process, NucNet will achieve its goal of providing the media and the public with a balanced picture of nuclear energy.

  9. NucNet's growing impact on the media

    International Nuclear Information System (INIS)

    Carle, Remy

    1995-01-01

    In the four years since the birth of NucNet there has been a gradual but radical change In the original concept of the network. In the beginning, the focus of attention was to make nuclear communicators better-informed and more efficient. What had been desperately needed for some time was an Information exchange system which would enable those communicators to do a better Job whether working proactlvely or reactively. The idea was primarily for positive nuclear news from Europe to be disseminated to people on the network so that they could pass it on to media contacts in their respective countries, as part of their regular dialogue with journalists. However, once NucNet was up-and-running a strong body of opinion emerged, arguing in favour of NucNet's most urgent, important or off-beat news - the 'A' category releases - to be sent direct to national and international news agencies. Quite rightly, it was felt that, in this way, the nuclear community could clearly demonstrate Its transparency and Its desire to Inform the public openly. At the same time, it was clear that sending to just a few national news agencies in Europe would not be enough. It was clear that NucNet would have to expand into a truly worldwide network and that, to reflect this, the main International news agencies would have to be put online as well. NucNet's growing impact on the media is a result of teamwork, and this teamwork takes different forms. It is: between the network's information suppliers and Central Office, among the Central Office staff themselves, between Central Office and the agencies, and between network members and their news media contacts. Through this continuing teamwork process, NucNet will achieve its goal of providing the media and the public with a balanced picture of nuclear energy

  10. NetWall distributed firewall in the use of campus network

    Science.gov (United States)

    He, Junhua; Zhang, Pengshuai

    2011-10-01

    Internet provides a modern means of education but also non-mainstream consciousness and poor dissemination of information opens the door, network and moral issues have become prominent, poor dissemination of information and network spread rumors and negative effects of new problems, ideological and political education in schools had a huge impact, poses a severe challenge. This paper presents a distributed firewall will NetWall deployed in a campus network solution. The characteristics of the campus network, using technology to filter out bad information on the means of control, of sensitive information related to the record, establish a complete information security management platform for the campus network.

  11. CellNet: Network Biology Applied to Stem Cell Engineering

    Science.gov (United States)

    Cahan, Patrick; Li, Hu; Morris, Samantha A.; da Rocha, Edroaldo Lummertz; Daley, George Q.; Collins, James J.

    2014-01-01

    SUMMARY Somatic cell reprogramming, directed differentiation of pluripotent stem cells, and direct conversions between differentiated cell lineages represent powerful approaches to engineer cells for research and regenerative medicine. We have developed CellNet, a network biology platform that more accurately assesses the fidelity of cellular engineering than existing methodologies and generates hypotheses for improving cell derivations. Analyzing expression data from 56 published reports, we found that cells derived via directed differentiation more closely resemble their in vivo counterparts than products of direct conversion, as reflected by the establishment of target cell-type gene regulatory networks (GRNs). Furthermore, we discovered that directly converted cells fail to adequately silence expression programs of the starting population, and that the establishment of unintended GRNs is common to virtually every cellular engineering paradigm. CellNet provides a platform for quantifying how closely engineered cell populations resemble their target cell type and a rational strategy to guide enhanced cellular engineering. PMID:25126793

  12. CellNet: network biology applied to stem cell engineering.

    Science.gov (United States)

    Cahan, Patrick; Li, Hu; Morris, Samantha A; Lummertz da Rocha, Edroaldo; Daley, George Q; Collins, James J

    2014-08-14

    Somatic cell reprogramming, directed differentiation of pluripotent stem cells, and direct conversions between differentiated cell lineages represent powerful approaches to engineer cells for research and regenerative medicine. We have developed CellNet, a network biology platform that more accurately assesses the fidelity of cellular engineering than existing methodologies and generates hypotheses for improving cell derivations. Analyzing expression data from 56 published reports, we found that cells derived via directed differentiation more closely resemble their in vivo counterparts than products of direct conversion, as reflected by the establishment of target cell-type gene regulatory networks (GRNs). Furthermore, we discovered that directly converted cells fail to adequately silence expression programs of the starting population and that the establishment of unintended GRNs is common to virtually every cellular engineering paradigm. CellNet provides a platform for quantifying how closely engineered cell populations resemble their target cell type and a rational strategy to guide enhanced cellular engineering. Copyright © 2014 Elsevier Inc. All rights reserved.

  13. Squeeze-SegNet: a new fast deep convolutional neural network for semantic segmentation

    Science.gov (United States)

    Nanfack, Geraldin; Elhassouny, Azeddine; Oulad Haj Thami, Rachid

    2018-04-01

    The recent researches in Deep Convolutional Neural Network have focused their attention on improving accuracy that provide significant advances. However, if they were limited to classification tasks, nowadays with contributions from Scientific Communities who are embarking in this field, they have become very useful in higher level tasks such as object detection and pixel-wise semantic segmentation. Thus, brilliant ideas in the field of semantic segmentation with deep learning have completed the state of the art of accuracy, however this architectures become very difficult to apply in embedded systems as is the case for autonomous driving. We present a new Deep fully Convolutional Neural Network for pixel-wise semantic segmentation which we call Squeeze-SegNet. The architecture is based on Encoder-Decoder style. We use a SqueezeNet-like encoder and a decoder formed by our proposed squeeze-decoder module and upsample layer using downsample indices like in SegNet and we add a deconvolution layer to provide final multi-channel feature map. On datasets like Camvid or City-states, our net gets SegNet-level accuracy with less than 10 times fewer parameters than SegNet.

  14. CoryneRegNet: An ontology-based data warehouse of corynebacterial transcription factors and regulatory networks

    Directory of Open Access Journals (Sweden)

    Czaja Lisa F

    2006-02-01

    Full Text Available Abstract Background The application of DNA microarray technology in post-genomic analysis of bacterial genome sequences has allowed the generation of huge amounts of data related to regulatory networks. This data along with literature-derived knowledge on regulation of gene expression has opened the way for genome-wide reconstruction of transcriptional regulatory networks. These large-scale reconstructions can be converted into in silico models of bacterial cells that allow a systematic analysis of network behavior in response to changing environmental conditions. Description CoryneRegNet was designed to facilitate the genome-wide reconstruction of transcriptional regulatory networks of corynebacteria relevant in biotechnology and human medicine. During the import and integration process of data derived from experimental studies or literature knowledge CoryneRegNet generates links to genome annotations, to identified transcription factors and to the corresponding cis-regulatory elements. CoryneRegNet is based on a multi-layered, hierarchical and modular concept of transcriptional regulation and was implemented by using the relational database management system MySQL and an ontology-based data structure. Reconstructed regulatory networks can be visualized by using the yFiles JAVA graph library. As an application example of CoryneRegNet, we have reconstructed the global transcriptional regulation of a cellular module involved in SOS and stress response of corynebacteria. Conclusion CoryneRegNet is an ontology-based data warehouse that allows a pertinent data management of regulatory interactions along with the genome-scale reconstruction of transcriptional regulatory networks. These models can further be combined with metabolic networks to build integrated models of cellular function including both metabolism and its transcriptional regulation.

  15. U-Net/SLE: A Java-Based User-Customizable Virtual Network Interface

    Directory of Open Access Journals (Sweden)

    Matt Welsh

    1999-01-01

    Full Text Available We describe U‐Net/SLE (Safe Language Extensions, a user‐level network interface architecture which enables per‐application customization of communication semantics through downloading of user extension applets, implemented as Java classfiles, to the network interface. This architecture permits applications to safely specify code to be executed within the NI on message transmission and reception. By leveraging the existing U‐Net model, applications may implement protocol code at the user level, within the NI, or using some combination of the two. Our current implementation, using the Myricom Myrinet interface and a small Java Virtual Machine subset, allows host communication overhead to be reduced and improves the overlap of communication and computation during protocol processing.

  16. ChemNet: A Transferable and Generalizable Deep Neural Network for Small-Molecule Property Prediction

    Energy Technology Data Exchange (ETDEWEB)

    Goh, Garrett B.; Siegel, Charles M.; Vishnu, Abhinav; Hodas, Nathan O.

    2017-12-08

    With access to large datasets, deep neural networks through representation learning have been able to identify patterns from raw data, achieving human-level accuracy in image and speech recognition tasks. However, in chemistry, availability of large standardized and labelled datasets is scarce, and with a multitude of chemical properties of interest, chemical data is inherently small and fragmented. In this work, we explore transfer learning techniques in conjunction with the existing Chemception CNN model, to create a transferable and generalizable deep neural network for small-molecule property prediction. Our latest model, ChemNet learns in a semi-supervised manner from inexpensive labels computed from the ChEMBL database. When fine-tuned to the Tox21, HIV and FreeSolv dataset, which are 3 separate chemical tasks that ChemNet was not originally trained on, we demonstrate that ChemNet exceeds the performance of existing Chemception models, contemporary MLP models that trains on molecular fingerprints, and it matches the performance of the ConvGraph algorithm, the current state-of-the-art. Furthermore, as ChemNet has been pre-trained on a large diverse chemical database, it can be used as a universal “plug-and-play” deep neural network, which accelerates the deployment of deep neural networks for the prediction of novel small-molecule chemical properties.

  17. WaterNet: The NASA Water Cycle Solutions Network

    Science.gov (United States)

    Houser, P. R.; Belvedere, D. R.; Pozzi, W. H.; Imam, B.; Schiffer, R.; Lawford, R.; Schlosser, C. A.; Gupta, H.; Welty, C.; Vorosmarty, C.; Matthews, D.

    2007-12-01

    Water is essential to life and directly impacts and constrains society's welfare, progress, and sustainable growth, and is continuously being transformed by climate change, erosion, pollution, and engineering practices. The water cycle is a critical resource for industry, agriculture, natural ecosystems, fisheries, aquaculture, hydroelectric power, recreation, and water supply, and is central to drought, flood, transportation-aviation, and disease hazards. It is therefore a national priority to use advancements in scientific observations and knowledge to develop solutions to the water challenges faced by society. NASA's unique role is to use its view from space to improve water and energy cycle monitoring and prediction. NASA has collected substantial water cycle information and knowledge that must be transitioned to develop solutions for all twelve National Priority Application (NPA) areas. NASA cannot achieve this goal alone -it must establish collaborations and interoperability with existing networks and nodes of research organizations, operational agencies, science communities, and private industry. Therefore, WaterNet: The NASA Water Cycle Solutions Network goal is to improve and optimize the sustained ability of water cycle researchers, stakeholders, organizations and networks to interact, identify, harness, and extend NASA research results to augment decision support tools and meet national needs. WaterNet is a catalyst for discovery and sharing of creative solutions to water problems. It serves as a creative, discovery process that is the entry-path for a research-to-solutions systems engineering NASA framework, with the end result to ultimately improve decision support.

  18. CGBayesNets: conditional Gaussian Bayesian network learning and inference with mixed discrete and continuous data.

    Science.gov (United States)

    McGeachie, Michael J; Chang, Hsun-Hsien; Weiss, Scott T

    2014-06-01

    Bayesian Networks (BN) have been a popular predictive modeling formalism in bioinformatics, but their application in modern genomics has been slowed by an inability to cleanly handle domains with mixed discrete and continuous variables. Existing free BN software packages either discretize continuous variables, which can lead to information loss, or do not include inference routines, which makes prediction with the BN impossible. We present CGBayesNets, a BN package focused around prediction of a clinical phenotype from mixed discrete and continuous variables, which fills these gaps. CGBayesNets implements Bayesian likelihood and inference algorithms for the conditional Gaussian Bayesian network (CGBNs) formalism, one appropriate for predicting an outcome of interest from, e.g., multimodal genomic data. We provide four different network learning algorithms, each making a different tradeoff between computational cost and network likelihood. CGBayesNets provides a full suite of functions for model exploration and verification, including cross validation, bootstrapping, and AUC manipulation. We highlight several results obtained previously with CGBayesNets, including predictive models of wood properties from tree genomics, leukemia subtype classification from mixed genomic data, and robust prediction of intensive care unit mortality outcomes from metabolomic profiles. We also provide detailed example analysis on public metabolomic and gene expression datasets. CGBayesNets is implemented in MATLAB and available as MATLAB source code, under an Open Source license and anonymous download at http://www.cgbayesnets.com.

  19. A High-Level Petri Net Framework for Genetic Regulatory Networks

    Directory of Open Access Journals (Sweden)

    Banks Richard

    2007-12-01

    Full Text Available To understand the function of genetic regulatory networks in the development of cellular systems, we must not only realise the individual network entities, but also the manner by which they interact. Multi-valued networks are a promising qualitative approach for modelling such genetic regulatory networks, however, at present they have limited formal analysis techniques and tools. We present a flexible formal framework for modelling and analysing multi-valued genetic regulatory networks using high-level Petri nets and logic minimization techniques. We demonstrate our approach with a detailed case study in which part of the genetic regulatory network responsible for the carbon starvation stress response in Escherichia coli is modelled and analysed. We then compare and contrast this multivalued model to a corresponding Boolean model and consider their formal relationship.

  20. Renewal of K-NET (National Strong-motion Observation Network of Japan)

    Science.gov (United States)

    Kunugi, T.; Fujiwara, H.; Aoi, S.; Adachi, S.

    2004-12-01

    The National Research Institute for Earth Science and Disaster Prevention (NIED) operates K-NET (Kyoshin Network), the national strong-motion observation network, which evenly covers the whole of Japan at intervals of 25 km on average. K-NET was constructed after the Hyogoken-Nambu (Kobe) earthquake in January 1995, and began operation in June 1996. Thus, eight years have passed since K-NET started, and large amounts of strong-motion records have been obtained. As technology has progressed and new technologies have become available, NIED has developed a new K-NET with improved functionality. New seismographs have been installed at 443 observatories mainly in southwestern Japan where there is a risk of strong-motion due to the Nankai and Tonankai earthquakes. The new system went into operation in June 2004, although seismographs have still to be replaced in other areas. The new seismograph (K-NET02) consists of a sensor module, a measurement module and a communication module. A UPS, a GPS antenna and a dial-up router are also installed together with a K-NET02. A triaxial accelerometer, FBA-ES-DECK (Kinemetrics Inc.) is built into the sensor module. The measurement module functions as a conventional strong-motion seismograph for high-precision observation. The communication module can perform sophisticated processes, such as calculation of the Japan Meteorological Agency (JMA) seismic intensity, continuous recording of data and near real-time data transmission. It connects to the Data Management Center (DMC) using an ISDN line. In case of a power failure, the measurement module can control the power supply to the router and the communication module to conserve battery power. One of the main features of K-NET02 is a function for processing JMA seismic intensity. K-NET02 functions as a proper seismic intensity meter that complies with the official requirements of JMA, although the old strong-motion seismograph (K-NET95) does not calculate seismic intensity. Another

  1. Functional network of glycan-related molecules: Glyco-Net in Glycoconjugate Data Bank

    Directory of Open Access Journals (Sweden)

    Miura Nobuaki

    2010-06-01

    Full Text Available Abstract Background Glycans are involved in a wide range of biological process, and they play an essential role in functions such as cell differentiation, cell adhesion, pathogen-host recognition, toxin-receptor interactions, signal transduction, cancer metastasis, and immune responses. Elucidating pathways related to post-translational modifications (PTMs such as glycosylation are of growing importance in post-genome science and technology. Graphical networks describing the relationships among glycan-related molecules, including genes, proteins, lipids and various biological events are considered extremely valuable and convenient tools for the systematic investigation of PTMs. However, there is no database which dynamically draws functional networks related to glycans. Description We have created a database called Glyco-Net http://www.glycoconjugate.jp/functions/, with many binary relationships among glycan-related molecules. Using search results, we can dynamically draw figures of the functional relationships among these components with nodes and arrows. A certain molecule or event corresponds to a node in the network figures, and the relationship between the molecule and the event are indicated by arrows. Since all components are treated equally, an arrow is also a node. Conclusions In this paper, we describe our new database, Glyco-Net, which is the first database to dynamically show networks of the functional profiles of glycan related molecules. The graphical networks will assist in the understanding of the role of the PTMs. In addition, since various kinds of bio-objects such as genes, proteins, and inhibitors are equally treated in Glyco-Net, we can obtain a large amount of information on the PTMs.

  2. atBioNet--an integrated network analysis tool for genomics and biomarker discovery.

    Science.gov (United States)

    Ding, Yijun; Chen, Minjun; Liu, Zhichao; Ding, Don; Ye, Yanbin; Zhang, Min; Kelly, Reagan; Guo, Li; Su, Zhenqiang; Harris, Stephen C; Qian, Feng; Ge, Weigong; Fang, Hong; Xu, Xiaowei; Tong, Weida

    2012-07-20

    Large amounts of mammalian protein-protein interaction (PPI) data have been generated and are available for public use. From a systems biology perspective, Proteins/genes interactions encode the key mechanisms distinguishing disease and health, and such mechanisms can be uncovered through network analysis. An effective network analysis tool should integrate different content-specific PPI databases into a comprehensive network format with a user-friendly platform to identify key functional modules/pathways and the underlying mechanisms of disease and toxicity. atBioNet integrates seven publicly available PPI databases into a network-specific knowledge base. Knowledge expansion is achieved by expanding a user supplied proteins/genes list with interactions from its integrated PPI network. The statistically significant functional modules are determined by applying a fast network-clustering algorithm (SCAN: a Structural Clustering Algorithm for Networks). The functional modules can be visualized either separately or together in the context of the whole network. Integration of pathway information enables enrichment analysis and assessment of the biological function of modules. Three case studies are presented using publicly available disease gene signatures as a basis to discover new biomarkers for acute leukemia, systemic lupus erythematosus, and breast cancer. The results demonstrated that atBioNet can not only identify functional modules and pathways related to the studied diseases, but this information can also be used to hypothesize novel biomarkers for future analysis. atBioNet is a free web-based network analysis tool that provides a systematic insight into proteins/genes interactions through examining significant functional modules. The identified functional modules are useful for determining underlying mechanisms of disease and biomarker discovery. It can be accessed at: http://www.fda.gov/ScienceResearch/BioinformaticsTools/ucm285284.htm.

  3. Mars MetNet Mission - Martian Atmospheric Observational Post Network

    Science.gov (United States)

    Hari, Ari-Matti; Haukka, Harri; Aleksashkin, Sergey; Arruego, Ignacio; Schmidt, Walter; Genzer, Maria; Vazquez, Luis; Siikonen, Timo; Palin, Matti

    2017-04-01

    A new kind of planetary exploration mission for Mars is under development in collaboration between the Finnish Meteorological Institute (FMI), Lavochkin Association (LA), Space Research Institute (IKI) and Institutio Nacional de Tecnica Aerospacial (INTA). The Mars MetNet mission is based on a new semi-hard landing vehicle called MetNet Lander (MNL). The scientific payload of the Mars MetNet Precursor [1] mission is divided into three categories: Atmospheric instruments, Optical devices and Composition and structure devices. Each of the payload instruments will provide significant insights in to the Martian atmospheric behavior. The key technologies of the MetNet Lander have been qualified and the electrical qualification model (EQM) of the payload bay has been built and successfully tested. 1. MetNet Lander The MetNet landing vehicles are using an inflatable entry and descent system instead of rigid heat shields and parachutes as earlier semi-hard landing devices have used. This way the ratio of the payload mass to the overall mass is optimized. The landing impact will burrow the payload container into the Martian soil providing a more favorable thermal environment for the electronics and a suitable orientation of the telescopic boom with external sensors and the radio link antenna. It is planned to deploy several tens of MNLs on the Martian surface operating at least partly at the same time to allow meteorological network science. 2. Strawman Scientific Payload The strawman payload of the two MNL precursor models includes the following instruments: Atmospheric instruments: - MetBaro Pressure device - MetHumi Humidity device - MetTemp Temperature sensors Optical devices: - PanCam Panoramic - MetSIS Solar irradiance sensor with OWLS optical wireless system for data transfer - DS Dust sensor Composition and Structure Devices: Tri-axial magnetometer MOURA Tri-axial System Accelerometer The descent processes dynamic properties are monitored by a special 3-axis

  4. Crowdsourcing Physical Network Topology Mapping With Net.Tagger

    Science.gov (United States)

    2016-03-01

    Markup Language LAMP Linux Apache MySQL PHP NANOG North American Network Operators Group NGO Non-Government Organization NPS Naval Postgraduate School...project’s choices closely mirror the archetypal Linux Apache MySQL PHP (LAMP) stack with a minor change to the database component, placing it on par...ahead of Windows’ third place 3.5% [54]. Technologically, it is not possible to port or cross-compile net.Tagger’s java - based Android code directly to

  5. QML-AiNet: An immune network approach to learning qualitative differential equation models.

    Science.gov (United States)

    Pang, Wei; Coghill, George M

    2015-02-01

    In this paper, we explore the application of Opt-AiNet, an immune network approach for search and optimisation problems, to learning qualitative models in the form of qualitative differential equations. The Opt-AiNet algorithm is adapted to qualitative model learning problems, resulting in the proposed system QML-AiNet. The potential of QML-AiNet to address the scalability and multimodal search space issues of qualitative model learning has been investigated. More importantly, to further improve the efficiency of QML-AiNet, we also modify the mutation operator according to the features of discrete qualitative model space. Experimental results show that the performance of QML-AiNet is comparable to QML-CLONALG, a QML system using the clonal selection algorithm (CLONALG). More importantly, QML-AiNet with the modified mutation operator can significantly improve the scalability of QML and is much more efficient than QML-CLONALG.

  6. tf_unet: Generic convolutional neural network U-Net implementation in Tensorflow

    Science.gov (United States)

    Akeret, Joel; Chang, Chihway; Lucchi, Aurelien; Refregier, Alexandre

    2016-11-01

    tf_unet mitigates radio frequency interference (RFI) signals in radio data using a special type of Convolutional Neural Network, the U-Net, that enables the classification of clean signal and RFI signatures in 2D time-ordered data acquired from a radio telescope. The code is not tied to a specific segmentation and can be used, for example, to detect radio frequency interference (RFI) in radio astronomy or galaxies and stars in widefield imaging data. This U-Net implementation can outperform classical RFI mitigation algorithms.

  7. NIRFaceNet: A Convolutional Neural Network for Near-Infrared Face Identification

    Directory of Open Access Journals (Sweden)

    Min Peng

    2016-10-01

    Full Text Available Near-infrared (NIR face recognition has attracted increasing attention because of its advantage of illumination invariance. However, traditional face recognition methods based on NIR are designed for and tested in cooperative-user applications. In this paper, we present a convolutional neural network (CNN for NIR face recognition (specifically face identification in non-cooperative-user applications. The proposed NIRFaceNet is modified from GoogLeNet, but has a more compact structure designed specifically for the Chinese Academy of Sciences Institute of Automation (CASIA NIR database and can achieve higher identification rates with less training time and less processing time. The experimental results demonstrate that NIRFaceNet has an overall advantage compared to other methods in the NIR face recognition domain when image blur and noise are present. The performance suggests that the proposed NIRFaceNet method may be more suitable for non-cooperative-user applications.

  8. Crosstalk-aware virtual network embedding over inter-datacenter optical networks with few-mode fibers

    Science.gov (United States)

    Huang, Haibin; Guo, Bingli; Li, Xin; Yin, Shan; Zhou, Yu; Huang, Shanguo

    2017-12-01

    Virtualization of datacenter (DC) infrastructures enables infrastructure providers (InPs) to provide novel services like virtual networks (VNs). Furthermore, optical networks have been employed to connect the metro-scale geographically distributed DCs. The synergistic virtualization of the DC infrastructures and optical networks enables the efficient VN service over inter-DC optical networks (inter-DCONs). While the capacity of the used standard single-mode fiber (SSMF) is limited by their nonlinear characteristics. Thus, mode-division multiplexing (MDM) technology based on few-mode fibers (FMFs) could be employed to increase the capacity of optical networks. Whereas, modal crosstalk (XT) introduced by optical fibers and components deployed in the MDM optical networks impacts the performance of VN embedding (VNE) over inter-DCONs with FMFs. In this paper, we propose a XT-aware VNE mechanism over inter-DCONs with FMFs. The impact of XT is considered throughout the VNE procedures. The simulation results show that the proposed XT-aware VNE can achieves better performances of blocking probability and spectrum utilization compared to conventional VNE mechanisms.

  9. QUAL-NET, a high temporal-resolution eutrophication model for large hydrographic networks

    Science.gov (United States)

    Minaudo, Camille; Curie, Florence; Jullian, Yann; Gassama, Nathalie; Moatar, Florentina

    2018-04-01

    To allow climate change impact assessment of water quality in river systems, the scientific community lacks efficient deterministic models able to simulate hydrological and biogeochemical processes in drainage networks at the regional scale, with high temporal resolution and water temperature explicitly determined. The model QUALity-NETwork (QUAL-NET) was developed and tested on the Middle Loire River Corridor, a sub-catchment of the Loire River in France, prone to eutrophication. Hourly variations computed efficiently by the model helped disentangle the complex interactions existing between hydrological and biological processes across different timescales. Phosphorus (P) availability was the most constraining factor for phytoplankton development in the Loire River, but simulating bacterial dynamics in QUAL-NET surprisingly evidenced large amounts of organic matter recycled within the water column through the microbial loop, which delivered significant fluxes of available P and enhanced phytoplankton growth. This explained why severe blooms still occur in the Loire River despite large P input reductions since 1990. QUAL-NET could be used to study past evolutions or predict future trajectories under climate change and land use scenarios.

  10. QUAL-NET, a high temporal-resolution eutrophication model for large hydrographic networks

    Directory of Open Access Journals (Sweden)

    C. Minaudo

    2018-04-01

    Full Text Available To allow climate change impact assessment of water quality in river systems, the scientific community lacks efficient deterministic models able to simulate hydrological and biogeochemical processes in drainage networks at the regional scale, with high temporal resolution and water temperature explicitly determined. The model QUALity-NETwork (QUAL-NET was developed and tested on the Middle Loire River Corridor, a sub-catchment of the Loire River in France, prone to eutrophication. Hourly variations computed efficiently by the model helped disentangle the complex interactions existing between hydrological and biological processes across different timescales. Phosphorus (P availability was the most constraining factor for phytoplankton development in the Loire River, but simulating bacterial dynamics in QUAL-NET surprisingly evidenced large amounts of organic matter recycled within the water column through the microbial loop, which delivered significant fluxes of available P and enhanced phytoplankton growth. This explained why severe blooms still occur in the Loire River despite large P input reductions since 1990. QUAL-NET could be used to study past evolutions or predict future trajectories under climate change and land use scenarios.

  11. StorNet: Integrated Dynamic Storage and Network Resource Provisioning and Management for Automated Data Transfers

    International Nuclear Information System (INIS)

    Gu Junmin; Natarajan, Vijaya; Shoshani, Arie; Sim, Alex; Katramatos, Dimitrios; Liu Xin; Yu Dantong; Bradley, Scott; McKee, Shawn

    2011-01-01

    StorNet is a joint project of Brookhaven National Laboratory (BNL) and Lawrence Berkeley National Laboratory (LBNL) to research, design, and develop an integrated end-to-end resource provisioning and management framework for high-performance data transfers. The StorNet framework leverages heterogeneous network protocols and storage types in a federated computing environment to provide the capability of predictable, efficient delivery of high-bandwidth data transfers for data intensive applications. The framework incorporates functional modules to perform such data transfers through storage and network bandwidth co-scheduling, storage and network resource provisioning, and performance monitoring, and is based on LBNL's BeStMan/SRM, BNL's TeraPaths, and ESNet's OSCARS systems.

  12. Modularization of biochemical networks based on classification of Petri net t-invariants.

    Science.gov (United States)

    Grafahrend-Belau, Eva; Schreiber, Falk; Heiner, Monika; Sackmann, Andrea; Junker, Björn H; Grunwald, Stefanie; Speer, Astrid; Winder, Katja; Koch, Ina

    2008-02-08

    Structural analysis of biochemical networks is a growing field in bioinformatics and systems biology. The availability of an increasing amount of biological data from molecular biological networks promises a deeper understanding but confronts researchers with the problem of combinatorial explosion. The amount of qualitative network data is growing much faster than the amount of quantitative data, such as enzyme kinetics. In many cases it is even impossible to measure quantitative data because of limitations of experimental methods, or for ethical reasons. Thus, a huge amount of qualitative data, such as interaction data, is available, but it was not sufficiently used for modeling purposes, until now. New approaches have been developed, but the complexity of data often limits the application of many of the methods. Biochemical Petri nets make it possible to explore static and dynamic qualitative system properties. One Petri net approach is model validation based on the computation of the system's invariant properties, focusing on t-invariants. T-invariants correspond to subnetworks, which describe the basic system behavior.With increasing system complexity, the basic behavior can only be expressed by a huge number of t-invariants. According to our validation criteria for biochemical Petri nets, the necessary verification of the biological meaning, by interpreting each subnetwork (t-invariant) manually, is not possible anymore. Thus, an automated, biologically meaningful classification would be helpful in analyzing t-invariants, and supporting the understanding of the basic behavior of the considered biological system. Here, we introduce a new approach to automatically classify t-invariants to cope with network complexity. We apply clustering techniques such as UPGMA, Complete Linkage, Single Linkage, and Neighbor Joining in combination with different distance measures to get biologically meaningful clusters (t-clusters), which can be interpreted as modules. To find

  13. Modularization of biochemical networks based on classification of Petri net t-invariants

    Directory of Open Access Journals (Sweden)

    Grunwald Stefanie

    2008-02-01

    Full Text Available Abstract Background Structural analysis of biochemical networks is a growing field in bioinformatics and systems biology. The availability of an increasing amount of biological data from molecular biological networks promises a deeper understanding but confronts researchers with the problem of combinatorial explosion. The amount of qualitative network data is growing much faster than the amount of quantitative data, such as enzyme kinetics. In many cases it is even impossible to measure quantitative data because of limitations of experimental methods, or for ethical reasons. Thus, a huge amount of qualitative data, such as interaction data, is available, but it was not sufficiently used for modeling purposes, until now. New approaches have been developed, but the complexity of data often limits the application of many of the methods. Biochemical Petri nets make it possible to explore static and dynamic qualitative system properties. One Petri net approach is model validation based on the computation of the system's invariant properties, focusing on t-invariants. T-invariants correspond to subnetworks, which describe the basic system behavior. With increasing system complexity, the basic behavior can only be expressed by a huge number of t-invariants. According to our validation criteria for biochemical Petri nets, the necessary verification of the biological meaning, by interpreting each subnetwork (t-invariant manually, is not possible anymore. Thus, an automated, biologically meaningful classification would be helpful in analyzing t-invariants, and supporting the understanding of the basic behavior of the considered biological system. Methods Here, we introduce a new approach to automatically classify t-invariants to cope with network complexity. We apply clustering techniques such as UPGMA, Complete Linkage, Single Linkage, and Neighbor Joining in combination with different distance measures to get biologically meaningful clusters (t

  14. GeoNetGIS: a Geodetic Network Geographical Information System to manage GPS networks in seismic and volcanic areas

    Science.gov (United States)

    Cristofoletti, P.; Esposito, A.; Anzidei, M.

    2003-04-01

    This paper presents the methodologies and issues involved in the use of GIS techniques to manage geodetic information derived from networks in seismic and volcanic areas. Organization and manipulation of different geodetical, geological and seismic database, give us a new challenge in interpretation of information that has several dimensions, including spatial and temporal variations, also the flexibility and brand range of tools available in GeoNetGIS, make it an attractive platform for earthquake risk assessment. During the last decade the use of geodetic networks based on the Global Positioning System, devoted to geophysical applications, especially for crustal deformation monitoring in seismic and volcanic areas, increased dramatically. The large amount of data provided by these networks, combined with different and independent observations, such as epicentre distribution of recent and historical earthquakes, geological and structural data, photo interpretation of aerial and satellite images, can aid for the detection and parameterization of seismogenic sources. In particular we applied our geodetic oriented GIS to a new GPS network recently set up and surveyed in the Central Apennine region: the CA-GeoNet. GeoNetGIS is designed to analyze in three and four dimensions GPS sources and to improve crustal deformation analysis and interpretation related with tectonic structures and seismicity. It manages many database (DBMS) consisting of different classes, such as Geodesy, Topography, Seismicity, Geology, Geography and Raster Images, administrated according to Thematic Layers. GeoNetGIS represents a powerful research tool allowing to join the analysis of all data layers to integrate the different data base which aid for the identification of the activity of known faults or structures and suggesting the new evidences of active tectonics. A new approach to data integration given by GeoNetGIS capabilities, allow us to create and deliver a wide range of maps, digital

  15. Saliency U-Net: A regional saliency map-driven hybrid deep learning network for anomaly segmentation

    Science.gov (United States)

    Karargyros, Alex; Syeda-Mahmood, Tanveer

    2018-02-01

    Deep learning networks are gaining popularity in many medical image analysis tasks due to their generalized ability to automatically extract relevant features from raw images. However, this can make the learning problem unnecessarily harder requiring network architectures of high complexity. In case of anomaly detection, in particular, there is often sufficient regional difference between the anomaly and the surrounding parenchyma that could be easily highlighted through bottom-up saliency operators. In this paper we propose a new hybrid deep learning network using a combination of raw image and such regional maps to more accurately learn the anomalies using simpler network architectures. Specifically, we modify a deep learning network called U-Net using both the raw and pre-segmented images as input to produce joint encoding (contraction) and expansion paths (decoding) in the U-Net. We present results of successfully delineating subdural and epidural hematomas in brain CT imaging and liver hemangioma in abdominal CT images using such network.

  16. LiteNet: Lightweight Neural Network for Detecting Arrhythmias at Resource-Constrained Mobile Devices

    Directory of Open Access Journals (Sweden)

    Ziyang He

    2018-04-01

    Full Text Available By running applications and services closer to the user, edge processing provides many advantages, such as short response time and reduced network traffic. Deep-learning based algorithms provide significantly better performances than traditional algorithms in many fields but demand more resources, such as higher computational power and more memory. Hence, designing deep learning algorithms that are more suitable for resource-constrained mobile devices is vital. In this paper, we build a lightweight neural network, termed LiteNet which uses a deep learning algorithm design to diagnose arrhythmias, as an example to show how we design deep learning schemes for resource-constrained mobile devices. Compare to other deep learning models with an equivalent accuracy, LiteNet has several advantages. It requires less memory, incurs lower computational cost, and is more feasible for deployment on resource-constrained mobile devices. It can be trained faster than other neural network algorithms and requires less communication across different processing units during distributed training. It uses filters of heterogeneous size in a convolutional layer, which contributes to the generation of various feature maps. The algorithm was tested using the MIT-BIH electrocardiogram (ECG arrhythmia database; the results showed that LiteNet outperforms comparable schemes in diagnosing arrhythmias, and in its feasibility for use at the mobile devices.

  17. LiteNet: Lightweight Neural Network for Detecting Arrhythmias at Resource-Constrained Mobile Devices.

    Science.gov (United States)

    He, Ziyang; Zhang, Xiaoqing; Cao, Yangjie; Liu, Zhi; Zhang, Bo; Wang, Xiaoyan

    2018-04-17

    By running applications and services closer to the user, edge processing provides many advantages, such as short response time and reduced network traffic. Deep-learning based algorithms provide significantly better performances than traditional algorithms in many fields but demand more resources, such as higher computational power and more memory. Hence, designing deep learning algorithms that are more suitable for resource-constrained mobile devices is vital. In this paper, we build a lightweight neural network, termed LiteNet which uses a deep learning algorithm design to diagnose arrhythmias, as an example to show how we design deep learning schemes for resource-constrained mobile devices. Compare to other deep learning models with an equivalent accuracy, LiteNet has several advantages. It requires less memory, incurs lower computational cost, and is more feasible for deployment on resource-constrained mobile devices. It can be trained faster than other neural network algorithms and requires less communication across different processing units during distributed training. It uses filters of heterogeneous size in a convolutional layer, which contributes to the generation of various feature maps. The algorithm was tested using the MIT-BIH electrocardiogram (ECG) arrhythmia database; the results showed that LiteNet outperforms comparable schemes in diagnosing arrhythmias, and in its feasibility for use at the mobile devices.

  18. NetMatchStar: an enhanced Cytoscape network querying app [version 1; referees: 2 approved

    Directory of Open Access Journals (Sweden)

    Fabio Rinnone

    2015-08-01

    Full Text Available We present NetMatchStar, a Cytoscape app to find all the occurrences of a query graph in a network and check for its significance as a motif with respect to seven different random models. The query can be uploaded or built from scratch using Cytoscape facilities. The app significantly enhances the previous NetMatch in style, performance and functionality. Notably NetMatchStar allows queries with wildcards.

  19. SpecNet: Spectrum Sensing Sans Frontieres

    OpenAIRE

    Iyer, Anand Padmanabha; Chintalapudi, Krishna; Navda, Vishnu; Ramjee, Ramachandran; Padmanabhan, Venkata N; Murthy, Chandra R

    2011-01-01

    While the under-utilization of licensed spectrum based on measurement studies conducted in a few developed countries has spurred lots of interest in opportunistic spectrum access, there exists no infrastructure today for measuring real-time spectrum occupancy across vast geographical regions. In this paper, we present the design and implementation of SpecNet, a first-of-its-kind platform that allows spectrum analyzers around the world to be networked and efficiently used in a coordinated manner...

  20. NetCooperate: a network-based tool for inferring host-microbe and microbe-microbe cooperation.

    Science.gov (United States)

    Levy, Roie; Carr, Rogan; Kreimer, Anat; Freilich, Shiri; Borenstein, Elhanan

    2015-05-17

    Host-microbe and microbe-microbe interactions are often governed by the complex exchange of metabolites. Such interactions play a key role in determining the way pathogenic and commensal species impact their host and in the assembly of complex microbial communities. Recently, several studies have demonstrated how such interactions are reflected in the organization of the metabolic networks of the interacting species, and introduced various graph theory-based methods to predict host-microbe and microbe-microbe interactions directly from network topology. Using these methods, such studies have revealed evolutionary and ecological processes that shape species interactions and community assembly, highlighting the potential of this reverse-ecology research paradigm. NetCooperate is a web-based tool and a software package for determining host-microbe and microbe-microbe cooperative potential. It specifically calculates two previously developed and validated metrics for species interaction: the Biosynthetic Support Score which quantifies the ability of a host species to supply the nutritional requirements of a parasitic or a commensal species, and the Metabolic Complementarity Index which quantifies the complementarity of a pair of microbial organisms' niches. NetCooperate takes as input a pair of metabolic networks, and returns the pairwise metrics as well as a list of potential syntrophic metabolic compounds. The Biosynthetic Support Score and Metabolic Complementarity Index provide insight into host-microbe and microbe-microbe metabolic interactions. NetCooperate determines these interaction indices from metabolic network topology, and can be used for small- or large-scale analyses. NetCooperate is provided as both a web-based tool and an open-source Python module; both are freely available online at http://elbo.gs.washington.edu/software_netcooperate.html.

  1. The Design of NetSecLab: A Small Competition-Based Network Security Lab

    Science.gov (United States)

    Lee, C. P.; Uluagac, A. S.; Fairbanks, K. D.; Copeland, J. A.

    2011-01-01

    This paper describes a competition-style of exercise to teach system and network security and to reinforce themes taught in class. The exercise, called NetSecLab, is conducted on a closed network with student-formed teams, each with their own Linux system to defend and from which to launch attacks. Students are expected to learn how to: 1) install…

  2. Community pharmacist participation in a practice-based research network: a report from the Medication Safety Research Network of Indiana (Rx-SafeNet).

    Science.gov (United States)

    Patel, Puja; Hemmeger, Heather; Kozak, Mary Ann; Gernant, Stephanie A; Snyder, Margie E

    2015-01-01

    To describe the experiences and opinions of pharmacists serving as site coordinators for the Medication Safety Research Network of Indiana (Rx-SafeNet). Retail chain, independent, and hospital/health system outpatient community pharmacies throughout Indiana, with a total of 127 pharmacy members represented by 26 site coordinators. Rx-SafeNet, a statewide practice-based research network (PBRN) formed in 2010 and administered by the Purdue University College of Pharmacy. Barriers and facilitators to participation in available research studies, confidence participating in research, and satisfaction with overall network communication. 22 of 26 site coordinators participated, resulting in an 85% response rate. Most (72.2%) of the respondents had received a doctor of pharmacy degree, and 13.6% had postgraduate year (PGY)1 residency training. The highest reported benefits of PBRN membership were an enhanced relationship with the Purdue University College of Pharmacy (81% agreed or strongly agreed) and enhanced professional development (80% agreed or strongly agreed). Time constraints were identified as the greatest potential barrier to network participation, reported by 62% of respondents. In addition, the majority (59%) of survey respondents identified no prior research experience. Last, respondents' confidence in performing research appeared to increase substantially after becoming network members, with 43% reporting a lack of confidence in engaging in research before joining the network compared with 90% reporting confidence after joining the network. In general, Rx-SafeNet site coordinators appeared to experience increased confidence in research engagement after joining the network. While respondents identified a number of benefits associated with network participation, concerns about potential time constraints remained a key barrier to participation. These findings will assist network leadership in identifying opportunities to positively increase member participation

  3. The proof of the pudding is in the eating: Net neutrality in practice, the Dutch example

    OpenAIRE

    van Eijk, N.

    2014-01-01

    The Netherlands is among the few countries that have put specific net neutrality standards in place. It was the first country to do so in the European Union. Contrary to the original European Union approach, which lacks a material implementation of net neutrality principles, the Dutch parliament decided to take a firmer position and introduced a quite detailed regimen on net neutrality. Providers of public electronic communications networks via which Internet access services are delivered and...

  4. E3Net: a system for exploring E3-mediated regulatory networks of cellular functions.

    Science.gov (United States)

    Han, Youngwoong; Lee, Hodong; Park, Jong C; Yi, Gwan-Su

    2012-04-01

    Ubiquitin-protein ligase (E3) is a key enzyme targeting specific substrates in diverse cellular processes for ubiquitination and degradation. The existing findings of substrate specificity of E3 are, however, scattered over a number of resources, making it difficult to study them together with an integrative view. Here we present E3Net, a web-based system that provides a comprehensive collection of available E3-substrate specificities and a systematic framework for the analysis of E3-mediated regulatory networks of diverse cellular functions. Currently, E3Net contains 2201 E3s and 4896 substrates in 427 organisms and 1671 E3-substrate specific relations between 493 E3s and 1277 substrates in 42 organisms, extracted mainly from MEDLINE abstracts and UniProt comments with an automatic text mining method and additional manual inspection and partly from high throughput experiment data and public ubiquitination databases. The significant functions and pathways of the extracted E3-specific substrate groups were identified from a functional enrichment analysis with 12 functional category resources for molecular functions, protein families, protein complexes, pathways, cellular processes, cellular localization, and diseases. E3Net includes interactive analysis and navigation tools that make it possible to build an integrative view of E3-substrate networks and their correlated functions with graphical illustrations and summarized descriptions. As a result, E3Net provides a comprehensive resource of E3s, substrates, and their functional implications summarized from the regulatory network structures of E3-specific substrate groups and their correlated functions. This resource will facilitate further in-depth investigation of ubiquitination-dependent regulatory mechanisms. E3Net is freely available online at http://pnet.kaist.ac.kr/e3net.

  5. Initial Results From The Micro-pulse Lidar Network (MPL-Net)

    Science.gov (United States)

    Welton, E. J.; Campbell, J. R.; Berkoff, T. A.; Spinhirne, J. D.; Ginoux, P.

    2001-12-01

    The micro-pulse lidar system (MPL) was developed in the early 1990s and was the first small, eye-safe, and autonomous lidar built for fulltime monitoring of cloud and aerosol vertical distributions. In 2000, a new project using MPL systems was started at NASA Goddard Space Flight Center. This new project, the Micro-pulse Lidar Network or MPL-Net, was created to provide long-term observations of aerosol and cloud vertical profiles at key sites around the world. This is accomplished using both NASA operated sites and partnerships with other organizations owning MPL systems. The MPL-Net sites are co-located with NASA AERONET sunphotometers to provide aerosol optical depth data needed for calibration of the MPL. In addition to the long-term sites, MPL-Net provides lidar support for a limited number of field experiments and ocean cruises each year. We will present an overview of the MPL-Net project and show initial results from the first two MPL-Net sites at the South Pole and at Goddard Space Flight Center. Observations of dust layers transported from the desert regions of China, across the Pacific Ocean, to the east coast of the United States will also be shown. MPL-Net affiliated instruments were in place at the desert source region in China, on a research vessel in the Sea of Japan, at ARM sites in Alaska and Oklahoma, and finally at our home site in Maryland (GSFC) during the massive dust storms that occurred in April 2001. The MPL observations of dust layers at each location are shown in comparison to dust layers predicted using the Georgia Tech/Goddard Global Ozone Chemistry Aerosol Radiation and Transport model (GOCART). Finally, the MPL-Net project is the primary ground-validation program for the Geo-Science Laser Altimeter System (GLAS) satellite lidar project (launch date 2002). We will present an overview demonstrating how MPL-Net results are used to help prepare the GLAS data processing algorithms and assist in the calibration/validation of the GLAS data

  6. Initial Results from the Micro-pulse Lidar Network (MPL-Net)

    Science.gov (United States)

    Welton, Ellsworth J.; Campbell, James R.; Berkoff, Timothy A.; Spinhirne, James D.; Ginoux, Paul; Starr, David OC. (Technical Monitor)

    2001-01-01

    The micro-pulse lidar system (MPL) was developed in the early 1990s and was the first small, eye-safe, and autonomous lidar built for full time monitoring of cloud and aerosol vertical distributions. In 2000, a new project using MPL systems was started at NASA Goddard Space Flight Center. This new project, the Micro-pulse Lidar Network or MPL-Net, was created to provide long-term observations of aerosol and cloud vertical profiles at key sites around the world. This is accomplished using both NASA operated sites and partnerships with other organizations owning MPL systems. The MPL-Net sites are co-located with NASA AERONET sunphotometers to provide aerosol optical depth data needed for calibration of the MPL. In addition to the long-term sites, MPL-Net provides lidar support for a limited number of field experiments and ocean cruises each year. We will present an overview of the MPL-Net project and show initial results from the first two MPL-Net sites at the South Pole and at Goddard Space Flight Center. Observations of dust layers transported from the Gobi desert, across the Pacific Ocean, to the east coast of the United States will also be shown. MPL-Net affiliated instruments were in place at the desert source region in China, on a research vessel in the Sea of Japan, at ARM sites in Alaska and Oklahoma, and finally at our home site in Maryland (GSFC) during the massive dust storms that occurred in April 2001. The MPL observations of dust layers at each location are shown in comparison to dust layers predicted using the Georgia Tech/Goddard Global Ozone Chemistry Aerosol Radiation and Transport model (GOCART). Finally, the MPL-Net project is the primary ground-validation program for the Geo-Science Laser Altimeter System (GLAS) satellite lidar project (launch date 2002). We will present an overview demonstrating how MPL-Net results are used to help prepare the GLAS data processing algorithms and assist in the calibration/validation of the GLAS data products.

  7. The EUVAC-NET project: creation and operation of a surveillance community network for vaccine preventable infectious diseases.

    Science.gov (United States)

    Glismann, S; Rønne, T; Tozzi, A

    2001-06-01

    The EUVAC-NET network is in charge of the epidemiological surveillance and control of vaccine preventable diseases. It is coordinated by the SSI in Denmark, in collaboration with the ISS in Italy. The two main diseases targeted by the network are measles and pertussis. A collaboration is planned with the PHLS for the monitoring of Haemophilus influenzae b. EUVAC-NET includes the Member States of the European Union, and Iceland, Norway and Switzerland.

  8. Effect of network topology on the evolutionary ultimatum game based on the net-profit decision

    Science.gov (United States)

    Ye, Shun-Qiang; Wang, Lu; Jones, Michael C.; Ye, Ye; Wang, Meng; Xie, Neng-Gang

    2016-04-01

    The ubiquity of altruist behavior amongst humans has long been a significant puzzle in the social sciences. Ultimatum game has proved to be a useful tool for explaining altruistic behavior among selfish individuals. In an ultimatum game where alternating roles exist, we suppose that players make their decisions based on the net profit of their own. In this paper, we specify a player's strategy with two parameters: offer level α ∈ [ 0,1) and net profit acceptance level β ∈ [ - 1,1). By Monte Carlo simulation, we analyze separately the effect of the size of the neighborhood, the small-world property and the heterogeneity of the degree distributions of the networks. Results show that compared with results observed for homogeneous networks, heterogeneous networks lead to more rational outcomes. Moreover, network structure has no effect on the evolution of kindness level, so moderate kindness is adaptable to any social groups and organizations.

  9. Stochastic Petri nets for the reliability analysis of communication network applications with alternate-routing

    International Nuclear Information System (INIS)

    Balakrishnan, Meera; Trivedi, Kishor S.

    1996-01-01

    In this paper, we present a comparative reliability analysis of an application on a corporate B-ISDN network under various alternate-routing protocols. For simple cases, the reliability problem can be cast into fault-tree models and solved rapidly by means of known methods. For more complex scenarios, state space (Markov) models are required. However, generation of large state space models can get very labor intensive and error prone. We advocate the use of stochastic reward nets (a variant of stochastic Petri nets) for the concise specification, automated generation and solution of alternate-routing protocols in networks. This paper is written in a tutorial style so as to make it accessible to a large audience

  10. SuperWiseNet - a unique network platform to leverage student entrepreneurship projects

    DEFF Research Database (Denmark)

    Gertsen, Frank; Høgsaa, Asger; Tollestrup, Christian H. T.

    2016-01-01

    The area of interests is the development of a potentially new complementary industry-university component, which has been labelled ‘SuperWiseNet’ for the context of academic entrepreneurial programs. The SuperWiseNet is a network-based platform for interaction between students of entrepreneurship...

  11. Visualizing NetCDF Files by Using the EverVIEW Data Viewer

    Science.gov (United States)

    Conzelmann, Craig; Romañach, Stephanie S.

    2010-01-01

    Over the past few years, modelers in South Florida have started using Network Common Data Form (NetCDF) as the standard data container format for storing hydrologic and ecologic modeling inputs and outputs. With its origins in the meteorological discipline, NetCDF was created by the Unidata Program Center at the University Corporation for Atmospheric Research, in conjunction with the National Aeronautics and Space Administration and other organizations. NetCDF is a portable, scalable, self-describing, binary file format optimized for storing array-based scientific data. Despite attributes which make NetCDF desirable to the modeling community, many natural resource managers have few desktop software packages which can consume NetCDF and unlock the valuable data contained within. The U.S. Geological Survey and the Joint Ecosystem Modeling group, an ecological modeling community of practice, are working to address this need with the EverVIEW Data Viewer. Available for several operating systems, this desktop software currently supports graphical displays of NetCDF data as spatial overlays on a three-dimensional globe and views of grid-cell values in tabular form. An included Open Geospatial Consortium compliant, Web-mapping service client and charting interface allows the user to view Web-available spatial data as additional map overlays and provides simple charting visualizations of NetCDF grid values.

  12. S-net : Construction of large scale seafloor observatory network for tsunamis and earthquakes along the Japan Trench

    Science.gov (United States)

    Mochizuki, M.; Uehira, K.; Kanazawa, T.; Shiomi, K.; Kunugi, T.; Aoi, S.; Matsumoto, T.; Sekiguchi, S.; Yamamoto, N.; Takahashi, N.; Nakamura, T.; Shinohara, M.; Yamada, T.

    2017-12-01

    NIED has launched the project of constructing a seafloor observatory network for tsunamis and earthquakes after the occurrence of the 2011 Tohoku Earthquake to enhance reliability of early warnings of tsunamis and earthquakes. The observatory network was named "S-net". The S-net project has been financially supported by MEXT.The S-net consists of 150 seafloor observatories which are connected in line with submarine optical cables. The total length of submarine optical cable is about 5,500 km. The S-net covers the focal region of the 2011 Tohoku Earthquake and its vicinity regions. Each observatory equips two units of a high sensitive pressure gauges as a tsunami meter and four sets of three-component seismometers. The S-net is composed of six segment networks. Five of six segment networks had been already installed. Installation of the last segment network covering the outer rise area have been finally finished by the end of FY2016. The outer rise segment has special features like no other five segments of the S-net. Those features are deep water and long distance. Most of 25 observatories on the outer rise segment are located at the depth of deeper than 6,000m WD. Especially, three observatories are set on the seafloor of deeper than about 7.000m WD, and then the pressure gauges capable of being used even at 8,000m WD are equipped on those three observatories. Total length of the submarine cables of the outer rise segment is about two times longer than those of the other segments. The longer the cable system is, the higher voltage supply is needed, and thus the observatories on the outer rise segment have high withstanding voltage characteristics. We employ a dispersion management line of a low loss formed by combining a plurality of optical fibers for the outer rise segment cable, in order to achieve long-distance, high-speed and large-capacity data transmission Installation of the outer rise segment was finished and then full-scale operation of S-net has started

  13. ImNet: a fiber optic network with multistar topology for high-speed data transmission

    Science.gov (United States)

    Vossebuerger, F.; Keizers, Andreas; Soederman, N.; Meyer-Ebrecht, Dietrich

    1993-10-01

    ImNet is a fiber-optic local area network, which has been developed for high speed image communication in Picture Archiving and Communication Systems (PACS). A comprehensive analysis of image communication requirements in hospitals led to the conclusion that there is a need for networks which are optimized for the transmission of large datafiles. ImNet is optimized for this application in contrast to current-state LANs. ImNet consists of two elements: a link module and a switch module. The point-to-point link module can be up to 4 km by using fiber optic cable. For short distances up to 100 m a cheaper module using shielded twisted pair cable is available. The link module works bi-directionally and handles all protocols up to OSI-Level 3. The data rate per link is up to 140 MBit/s (clock rate 175 MHz). The switch module consists of the control unit and the cross-point-switch array. The array has up to fourteen interfaces for link modules. Up to fourteen data transfers each with a maximal transfer rate of 400 MBit/s can be handled at the same time. Thereby the maximal throughput of a switch module is 5.6 GBit/s. Out of these modules a multi-star network can be built i.e., an arbitrary tree structure of stars. This topology allows multiple transmissions at the same time as long as they do not require identical links. Therefore the overall throughput of ImNet can be a multiple of the datarate per link.

  14. Assessment of the expected construction company’s net profit using neural network and multiple regression models

    Directory of Open Access Journals (Sweden)

    H.H. Mohamad

    2013-09-01

    This research aims to develop a mathematical model for assessing the expected net profit of any construction company. To achieve the research objective, four steps were performed. First, the main factors affecting firms’ net profit were identified. Second, pertinent data regarding the net profit factors were collected. Third, two different net profit models were developed using the Multiple Regression (MR and the Neural Network (NN techniques. The validity of the proposed models was also investigated. Finally, the results of both MR and NN models were compared to investigate the predictive capabilities of the two models.

  15. Leveraging Microgrids for Capturing Uncertain Distribution Network Net Load Ramping

    OpenAIRE

    Majzoobi, Alireza; Khodaei, Amin

    2016-01-01

    In this paper, a flexibility-oriented microgrid optimal scheduling model is proposed to mitigate distribution network net load variability caused by large penetration distributed solar generation. The distributed solar generation variability, which is caused by increasing adoption of this technology by end-use consumers, is mainly addressed by electric utilities using grid reinforcement. Microgrids, however, provide viable and local solutions to this pressing challenge. The proposed model, wh...

  16. GeneNetWeaver: in silico benchmark generation and performance profiling of network inference methods.

    Science.gov (United States)

    Schaffter, Thomas; Marbach, Daniel; Floreano, Dario

    2011-08-15

    Over the last decade, numerous methods have been developed for inference of regulatory networks from gene expression data. However, accurate and systematic evaluation of these methods is hampered by the difficulty of constructing adequate benchmarks and the lack of tools for a differentiated analysis of network predictions on such benchmarks. Here, we describe a novel and comprehensive method for in silico benchmark generation and performance profiling of network inference methods available to the community as an open-source software called GeneNetWeaver (GNW). In addition to the generation of detailed dynamical models of gene regulatory networks to be used as benchmarks, GNW provides a network motif analysis that reveals systematic prediction errors, thereby indicating potential ways of improving inference methods. The accuracy of network inference methods is evaluated using standard metrics such as precision-recall and receiver operating characteristic curves. We show how GNW can be used to assess the performance and identify the strengths and weaknesses of six inference methods. Furthermore, we used GNW to provide the international Dialogue for Reverse Engineering Assessments and Methods (DREAM) competition with three network inference challenges (DREAM3, DREAM4 and DREAM5). GNW is available at http://gnw.sourceforge.net along with its Java source code, user manual and supporting data. Supplementary data are available at Bioinformatics online. dario.floreano@epfl.ch.

  17. MLS-Net and SecureParser®: A New Method for Securing and Segregating Network Data

    Directory of Open Access Journals (Sweden)

    Robert A. Johnson

    2008-10-01

    Full Text Available A new method of network security and virtualization is presented which allows the consolidation of multiple network infrastructures dedicated to single security levels or communities of interest onto a single, virtualized network. An overview of the state of the art of network security protocols is presented, including the use of SSL, IPSec, and HAIPE IS, followed by a discussion of the SecureParser® technology and MLS-Net architecture, which in combination allow the virtualization of local network enclaves.

  18. Neural-net based real-time economic dispatch for thermal power plants

    Energy Technology Data Exchange (ETDEWEB)

    Djukanovic, M.; Milosevic, B. [Inst. Nikola Tesla, Belgrade (Yugoslavia). Dept. of Power Systems; Calovic, M. [Univ. of Belgrade (Yugoslavia). Dept. of Electrical Engineering; Sobajic, D.J. [Electric Power Research Inst., Palo Alto, CA (United States)

    1996-12-01

    This paper proposes the application of artificial neural networks to real-time optimal generation dispatch of thermal units. The approach can take into account the operational requirements and network losses. The proposed economic dispatch uses an artificial neural network (ANN) for generation of penalty factors, depending on the input generator powers and identified system load change. Then, a few additional iterations are performed within an iterative computation procedure for the solution of coordination equations, by using reference-bus penalty-factors derived from the Newton-Raphson load flow. A coordination technique for environmental and economic dispatch of pure thermal systems, based on the neural-net theory for simplified solution algorithms and improved man-machine interface is introduced. Numerical results on two test examples show that the proposed algorithm can efficiently and accurately develop optimal and feasible generator output trajectories, by applying neural-net forecasts of system load patterns.

  19. 8th Conference on Complex Networks

    CERN Document Server

    Menezes, Ronaldo; Sinatra, Roberta; Zlatic, Vinko

    2017-01-01

    This book collects the works presented at the 8th International Conference on Complex Networks (CompleNet) 2017 in Dubrovnik, Croatia, on March 21-24, 2017. CompleNet aims at bringing together researchers and practitioners working in areas related to complex networks. The past two decades has witnessed an exponential increase in the number of publications within this field. From biological systems to computer science, from economic to social systems, complex networks are becoming pervasive in many fields of science. It is this interdisciplinary nature of complex networks that CompleNet aims at addressing. The last decades have seen the emergence of complex networks as the language with which a wide range of complex phenomena in fields as diverse as physics, computer science, and medicine (to name a few) can be properly described and understood. This book provides a view of the state-of-the-art in this dynamic field and covers topics such as network controllability, social structure, online behavior, recommend...

  20. NetSig

    DEFF Research Database (Denmark)

    Horn, Heiko; Lawrence, Michael S; Chouinard, Candace R

    2018-01-01

    Methods that integrate molecular network information and tumor genome data could complement gene-based statistical tests to identify likely new cancer genes; but such approaches are challenging to validate at scale, and their predictive value remains unclear. We developed a robust statistic (Net......Sig) that integrates protein interaction networks with data from 4,742 tumor exomes. NetSig can accurately classify known driver genes in 60% of tested tumor types and predicts 62 new driver candidates. Using a quantitative experimental framework to determine in vivo tumorigenic potential in mice, we found that Net......Sig candidates induce tumors at rates that are comparable to those of known oncogenes and are ten-fold higher than those of random genes. By reanalyzing nine tumor-inducing NetSig candidates in 242 patients with oncogene-negative lung adenocarcinomas, we find that two (AKT2 and TFDP2) are significantly amplified...

  1. Encouraging student-driven clinical research in Germany: the CHIR-Net SIGMA network

    Directory of Open Access Journals (Sweden)

    Frey Pia-Elena

    2017-11-01

    Full Text Available Evidence should define and guide modern clinical care, yet many relevant questions in surgical practice remain unconfirmed by substantial data. Evidence-based medicine requires both the implementation of its principles in day-to-day work and the acquisition of new evidence preferably by randomized controlled trials and systematic reviews. Meaningful clinical research, however, is challenging to conduct, and its overall infrastructure in Germany was, until recently, considered poor compared to other leading countries. Although this has been significantly improved after the establishment of the Study Center of the German Surgical Society (SDGC and the surgical clinical trial network CHIR-Net, limited focus has been put on the training, teaching, and recruitment of medical students to become competent clinical researchers and clinician scientists. To ensure continuing comprehensive clinical research in surgery, CHIR-Net aims to establish a student-driven multicenter research network in Germany, which is embedded in both the national CHIR-Net and the pan-European and international frameworks. Student-Initiated German Medical Audits (SIGMA is a product of the strong collaboration between clinical scientists and medical trainees, enabling students to contribute to high-quality clinical trials. Additionally, participants are offered extensive training to support the next generation of research-active clinicians. Starting on 2018, SIGMA will perform its first multicenter observational study in Germany.

  2. OmicsNet: a web-based tool for creation and visual analysis of biological networks in 3D space.

    Science.gov (United States)

    Zhou, Guangyan; Xia, Jianguo

    2018-06-07

    Biological networks play increasingly important roles in omics data integration and systems biology. Over the past decade, many excellent tools have been developed to support creation, analysis and visualization of biological networks. However, important limitations remain: most tools are standalone programs, the majority of them focus on protein-protein interaction (PPI) or metabolic networks, and visualizations often suffer from 'hairball' effects when networks become large. To help address these limitations, we developed OmicsNet - a novel web-based tool that allows users to easily create different types of molecular interaction networks and visually explore them in a three-dimensional (3D) space. Users can upload one or multiple lists of molecules of interest (genes/proteins, microRNAs, transcription factors or metabolites) to create and merge different types of biological networks. The 3D network visualization system was implemented using the powerful Web Graphics Library (WebGL) technology that works natively in most major browsers. OmicsNet supports force-directed layout, multi-layered perspective layout, as well as spherical layout to help visualize and navigate complex networks. A rich set of functions have been implemented to allow users to perform coloring, shading, topology analysis, and enrichment analysis. OmicsNet is freely available at http://www.omicsnet.ca.

  3. BioNet Digital Communications Framework

    Science.gov (United States)

    Gifford, Kevin; Kuzminsky, Sebastian; Williams, Shea

    2010-01-01

    BioNet v2 is a peer-to-peer middleware that enables digital communication devices to talk to each other. It provides a software development framework, standardized application, network-transparent device integration services, a flexible messaging model, and network communications for distributed applications. BioNet is an implementation of the Constellation Program Command, Control, Communications and Information (C3I) Interoperability specification, given in CxP 70022-01. The system architecture provides the necessary infrastructure for the integration of heterogeneous wired and wireless sensing and control devices into a unified data system with a standardized application interface, providing plug-and-play operation for hardware and software systems. BioNet v2 features a naming schema for mobility and coarse-grained localization information, data normalization within a network-transparent device driver framework, enabling of network communications to non-IP devices, and fine-grained application control of data subscription band width usage. BioNet directly integrates Disruption Tolerant Networking (DTN) as a communications technology, enabling networked communications with assets that are only intermittently connected including orbiting relay satellites and planetary rover vehicles.

  4. First results from comparison of rainfall estimations by GPM IMERG with rainfall measurements from the WegenerNet high density network

    Science.gov (United States)

    Oo, Sungmin; Foelsche, Ulrich; Kirchengast, Gottfried; Fuchsberger, Jürgen

    2016-04-01

    The research level products of the Integrated Multi-Satellite Retrievals for Global Precipitation Measurement (IMERG "Final" run datasets) were compared with rainfall measurements from the WegenerNet high density network as part of ground validation (GV) projects of GPM missions. The WegenerNet network comprises 151 ground level weather stations in an area of 15 km × 20 km in south-eastern Austria (Feldbach region, ˜46.93° N, ˜15.90° E) designed to serve as a long-term monitoring and validation facility for weather and climate research and applications. While the IMERG provides rainfall estimations every half hour at 0.1° resolution, the WegenerNet network measures rainfall every 5 minutes at around 2 km2 resolution and produces 200 m × 200 m gridded datasets. The study was conducted on the domain of the WegenerNet network; eight IMERG grids are overlapped with the network, two of which are entirely covered by the WegenerNet (40 and 39 stations in each grid). We investigated data from April to September of the years 2014 to 2015; the date of first two years after the launch of the GPM Core Observatory. Since the network has a flexibility to work with various spatial and temporal scales, the comparison could be conducted on average-points to pixel basis at both sub-daily and daily timescales. This presentation will summarize the first results of the comparison and future plans to explore the characteristics of errors in the IMERG datasets.

  5. Application of deconvolution interferometry with both Hi-net and KiK-net data

    Science.gov (United States)

    Nakata, N.

    2013-12-01

    Application of deconvolution interferometry to wavefields observed by KiK-net, a strong-motion recording network in Japan, is useful for estimating wave velocities and S-wave splitting in the near surface. Using this technique, for example, Nakata and Snieder (2011, 2012) found changed in velocities caused by Tohoku-Oki earthquake in Japan. At the location of the borehole accelerometer of each KiK-net station, a velocity sensor is also installed as a part of a high-sensitivity seismograph network (Hi-net). I present a technique that uses both Hi-net and KiK-net records for computing deconvolution interferometry. The deconvolved waveform obtained from the combination of Hi-net and KiK-net data is similar to the waveform computed from KiK-net data only, which indicates that one can use Hi-net wavefields for deconvolution interferometry. Because Hi-net records have a high signal-to-noise ratio (S/N) and high dynamic resolution, the S/N and the quality of amplitude and phase of deconvolved waveforms can be improved with Hi-net data. These advantages are especially important for short-time moving-window seismic interferometry and deconvolution interferometry using later coda waves.

  6. PollyNET - an emerging network of automated raman-polarizarion lidars for continuous aerosolprofiling

    Science.gov (United States)

    Baars, Holger; Althausen, Dietrich; Engelmann, Ronny; Heese, Birgit; Ansmann, Albert; Wandinger, Ulla; Hofer, Julian; Skupin, Annett; Komppula, Mika; Giannakaki, Eleni; Filioglou, Maria; Bortoli, Daniele; Silva, Ana Maria; Pereira, Sergio; Stachlewska, Iwona S.; Kumala, Wojciech; Szczepanik, Dominika; Amiridis, Vassilis; Marinou, Eleni; Kottas, Michail; Mattis, Ina; Müller, Gerhard

    2018-04-01

    PollyNET is a network of portable, automated, and continuously measuring Ramanpolarization lidars of type Polly operated by several institutes worldwide. The data from permanent and temporary measurements sites are automatically processed in terms of optical aerosol profiles and displayed in near-real time at polly.tropos.de. According to current schedules, the network will grow by 3-4 systems during the upcoming 2-3 years and will then comprise 11 permanent stations and 2 mobile platforms.

  7. Unlearning in feed-forward multi-nets

    NARCIS (Netherlands)

    Spaanenburg, L; Kurkova,; Steele, NC; Neruda, R; Karny, M

    2001-01-01

    Multi-nets promise an improved performance over monolithic neural networks by virtue of their distributed implementation. Modular neural networks are multi-nets based on an judicious assembly of functionally different parts. This can be viewed as again a monolithic network, but with more complex

  8. The 11th Annual Mediterranean Ad Hoc Networking Workshop (Med-Hoc-Net 2012)

    NARCIS (Netherlands)

    Pitsillides, A.; Douligeris, C.; Vassiliou, V.; Heijenk, Geert; Cavalcante de Oliveira, J.

    Message from the General Chairs Welcome to the 2012 Mediterranean Ad Hoc Networking Workshop in Ayia Napa, Cyprus. We are excited to host Med-Hoc-Net. As a major annual international workshop, following recent successful workshops in Sicily (2006), Corfu (2007), Palma de Mallorca (2008), Haifa

  9. Conversational Scholarship in Cyberspace: The Evolution and Activities of H-Net, the Online Network for the Humanities.

    Science.gov (United States)

    Turnbull, Paul

    1996-01-01

    The origins and current use of H-Net, an online humanities network on the World Wide Web, are examined. H-Net currently sponsors 73 electronic discussion lists that reach subscribers in 68 countries. Discussion groups have not met expectations for scholarly exchange, possibly because of plagiarism and copyright concerns. New ventures include book…

  10. An Expanded Study of Net Generation Perceptions on Privacy and Security on Social Networking Sites (SNS)

    Science.gov (United States)

    Lawler, James P.; Molluzzo, John C.; Doshi, Vijal

    2012-01-01

    Social networking on the Internet continues to be a frequent avenue of communication, especially among Net Generation consumers, giving benefits both personal and professional. The benefits may be eventually hindered by issues in information gathering and sharing on social networking sites. This study evaluates the perceptions of students taking a…

  11. Fused-fiber-based 3-dB mode insensitive power splitters for few-mode optical fiber networks

    Science.gov (United States)

    Ren, Fang; Huang, Xiaoshan; Wang, Jianping

    2017-11-01

    We propose a 3-dB mode insensitive power splitter (MIPS) capable of broadcasting and combining optical signals. It is fabricated with two identical few-mode fibers (FMFs) by a heating and pulling technique. The mode-dependent power transfer characteristic as a function of pulling length is investigated. For exploiting its application, we experimentally demonstrate both FMF-based transmissive and reflective star couplers consisting of multiple 3-dB mode insensitive power splitters, which perform broadcasting and routing signals in few-mode optical fiber networks such as mode-division multiplexing (MDM) local area networks using star topology. For experimental demonstration, optical on-off keying signals at 10 Gb/s carried on three spatial modes are successfully processed with open and clear eye diagrams. Measured bit error ratio results show reasonable power penalties. It is found that a reflective star coupler in MDM networks can reduce half of the total amount of required fibers comparing to that of a transmissive star coupler. This MIPS is more efficient, more reliable, more flexible, and more cost-effective for future expansion and application in few-mode optical fiber networks.

  12. A Microsoft-Excel-based tool for running and critically appraising network meta-analyses--an overview and application of NetMetaXL.

    Science.gov (United States)

    Brown, Stephen; Hutton, Brian; Clifford, Tammy; Coyle, Doug; Grima, Daniel; Wells, George; Cameron, Chris

    2014-09-29

    The use of network meta-analysis has increased dramatically in recent years. WinBUGS, a freely available Bayesian software package, has been the most widely used software package to conduct network meta-analyses. However, the learning curve for WinBUGS can be daunting, especially for new users. Furthermore, critical appraisal of network meta-analyses conducted in WinBUGS can be challenging given its limited data manipulation capabilities and the fact that generation of graphical output from network meta-analyses often relies on different software packages than the analyses themselves. We developed a freely available Microsoft-Excel-based tool called NetMetaXL, programmed in Visual Basic for Applications, which provides an interface for conducting a Bayesian network meta-analysis using WinBUGS from within Microsoft Excel. . This tool allows the user to easily prepare and enter data, set model assumptions, and run the network meta-analysis, with results being automatically displayed in an Excel spreadsheet. It also contains macros that use NetMetaXL's interface to generate evidence network diagrams, forest plots, league tables of pairwise comparisons, probability plots (rankograms), and inconsistency plots within Microsoft Excel. All figures generated are publication quality, thereby increasing the efficiency of knowledge transfer and manuscript preparation. We demonstrate the application of NetMetaXL using data from a network meta-analysis published previously which compares combined resynchronization and implantable defibrillator therapy in left ventricular dysfunction. We replicate results from the previous publication while demonstrating result summaries generated by the software. Use of the freely available NetMetaXL successfully demonstrated its ability to make running network meta-analyses more accessible to novice WinBUGS users by allowing analyses to be conducted entirely within Microsoft Excel. NetMetaXL also allows for more efficient and transparent

  13. A Microsoft-Excel-based tool for running and critically appraising network meta-analyses—an overview and application of NetMetaXL

    Science.gov (United States)

    2014-01-01

    Background The use of network meta-analysis has increased dramatically in recent years. WinBUGS, a freely available Bayesian software package, has been the most widely used software package to conduct network meta-analyses. However, the learning curve for WinBUGS can be daunting, especially for new users. Furthermore, critical appraisal of network meta-analyses conducted in WinBUGS can be challenging given its limited data manipulation capabilities and the fact that generation of graphical output from network meta-analyses often relies on different software packages than the analyses themselves. Methods We developed a freely available Microsoft-Excel-based tool called NetMetaXL, programmed in Visual Basic for Applications, which provides an interface for conducting a Bayesian network meta-analysis using WinBUGS from within Microsoft Excel. . This tool allows the user to easily prepare and enter data, set model assumptions, and run the network meta-analysis, with results being automatically displayed in an Excel spreadsheet. It also contains macros that use NetMetaXL’s interface to generate evidence network diagrams, forest plots, league tables of pairwise comparisons, probability plots (rankograms), and inconsistency plots within Microsoft Excel. All figures generated are publication quality, thereby increasing the efficiency of knowledge transfer and manuscript preparation. Results We demonstrate the application of NetMetaXL using data from a network meta-analysis published previously which compares combined resynchronization and implantable defibrillator therapy in left ventricular dysfunction. We replicate results from the previous publication while demonstrating result summaries generated by the software. Conclusions Use of the freely available NetMetaXL successfully demonstrated its ability to make running network meta-analyses more accessible to novice WinBUGS users by allowing analyses to be conducted entirely within Microsoft Excel. NetMetaXL also allows

  14. NetMOD Version 2.0 Mathematical Framework

    Energy Technology Data Exchange (ETDEWEB)

    Merchant, Bion J. [Sandia National Lab. (SNL-NM), Albuquerque, NM (United States); Young, Christopher J. [Sandia National Lab. (SNL-NM), Albuquerque, NM (United States); Chael, Eric P. [Sandia National Lab. (SNL-NM), Albuquerque, NM (United States)

    2015-08-01

    NetMOD ( Net work M onitoring for O ptimal D etection) is a Java-based software package for conducting simulation of seismic, hydroacoustic and infrasonic networks. Network simulations have long been used to study network resilience to station outages and to determine where additional stations are needed to reduce monitoring thresholds. NetMOD makes use of geophysical models to determine the source characteristics, signal attenuation along the path between the source and station, and the performance and noise properties of the station. These geophysical models are combined to simulate the relative amplitudes of signal and noise that are observed at each of the stations. From these signal-to-noise ratios (SNR), the probabilities of signal detection at each station and event detection across the network of stations can be computed given a detection threshold. The purpose of this document is to clearly and comprehensively present the mathematical framework used by NetMOD, the software package developed by Sandia National Laboratories to assess the monitoring capability of ground-based sensor networks. Many of the NetMOD equations used for simulations are inherited from the NetSim network capability assessment package developed in the late 1980s by SAIC (Sereno et al., 1990).

  15. NetGen: a novel network-based probabilistic generative model for gene set functional enrichment analysis.

    Science.gov (United States)

    Sun, Duanchen; Liu, Yinliang; Zhang, Xiang-Sun; Wu, Ling-Yun

    2017-09-21

    High-throughput experimental techniques have been dramatically improved and widely applied in the past decades. However, biological interpretation of the high-throughput experimental results, such as differential expression gene sets derived from microarray or RNA-seq experiments, is still a challenging task. Gene Ontology (GO) is commonly used in the functional enrichment studies. The GO terms identified via current functional enrichment analysis tools often contain direct parent or descendant terms in the GO hierarchical structure. Highly redundant terms make users difficult to analyze the underlying biological processes. In this paper, a novel network-based probabilistic generative model, NetGen, was proposed to perform the functional enrichment analysis. An additional protein-protein interaction (PPI) network was explicitly used to assist the identification of significantly enriched GO terms. NetGen achieved a superior performance than the existing methods in the simulation studies. The effectiveness of NetGen was explored further on four real datasets. Notably, several GO terms which were not directly linked with the active gene list for each disease were identified. These terms were closely related to the corresponding diseases when accessed to the curated literatures. NetGen has been implemented in the R package CopTea publicly available at GitHub ( http://github.com/wulingyun/CopTea/ ). Our procedure leads to a more reasonable and interpretable result of the functional enrichment analysis. As a novel term combination-based functional enrichment analysis method, NetGen is complementary to current individual term-based methods, and can help to explore the underlying pathogenesis of complex diseases.

  16. MercNet: A national monitoring network to assess responses to changing mercury emissions in the United States

    Science.gov (United States)

    Schmeltz, D.; Evers, D.C.; Driscoll, C.T.; Artz, R.; Cohen, M.; Gay, D.; Haeuber, R.; Krabbenhoft, D.P.; Mason, R.; Morris, K.; Wiener, J.G.

    2011-01-01

    A partnership of federal and state agencies, tribes, industry, and scientists from academic research and environmental organizations is establishing a national, policy-relevant mercury monitoring network, called MercNet, to address key questions concerning changes in anthropogenic mercury emissions and deposition, associated linkages to ecosystem effects, and recovery from mercury contamination. This network would quantify mercury in the atmosphere, land, water, and biota in terrestrial, freshwater, and coastal ecosystems to provide a national scientific capability for evaluating the benefits and effectiveness of emission controls. Program development began with two workshops, convened to establish network goals, to select key indicators for monitoring, to propose a geographic network of monitoring sites, and to design a monitoring plan. MercNet relies strongly on multi-institutional partnerships to secure the capabilities and comprehensive data that are needed to develop, calibrate, and refine predictive mercury models and to guide effective management. Ongoing collaborative efforts include the: (1) development of regional multi-media databases on mercury in the Laurentian Great Lakes, northeastern United States, and eastern Canada; (2) syntheses and reporting of these data for the scientific and policy communities; and (3) evaluation of potential monitoring sites. The MercNet approach could be applied to the development of other monitoring programs, such as emerging efforts to monitor and assess global mercury emission controls. ?? 2011 Springer Science+Business Media, LLC (outside the USA).

  17. TopologyNet: Topology based deep convolutional and multi-task neural networks for biomolecular property predictions

    Science.gov (United States)

    2017-01-01

    Although deep learning approaches have had tremendous success in image, video and audio processing, computer vision, and speech recognition, their applications to three-dimensional (3D) biomolecular structural data sets have been hindered by the geometric and biological complexity. To address this problem we introduce the element-specific persistent homology (ESPH) method. ESPH represents 3D complex geometry by one-dimensional (1D) topological invariants and retains important biological information via a multichannel image-like representation. This representation reveals hidden structure-function relationships in biomolecules. We further integrate ESPH and deep convolutional neural networks to construct a multichannel topological neural network (TopologyNet) for the predictions of protein-ligand binding affinities and protein stability changes upon mutation. To overcome the deep learning limitations from small and noisy training sets, we propose a multi-task multichannel topological convolutional neural network (MM-TCNN). We demonstrate that TopologyNet outperforms the latest methods in the prediction of protein-ligand binding affinities, mutation induced globular protein folding free energy changes, and mutation induced membrane protein folding free energy changes. Availability: weilab.math.msu.edu/TDL/ PMID:28749969

  18. MutaNET: a tool for automated analysis of genomic mutations in gene regulatory networks.

    Science.gov (United States)

    Hollander, Markus; Hamed, Mohamed; Helms, Volkhard; Neininger, Kerstin

    2018-03-01

    Mutations in genomic key elements can influence gene expression and function in various ways, and hence greatly contribute to the phenotype. We developed MutaNET to score the impact of individual mutations on gene regulation and function of a given genome. MutaNET performs statistical analyses of mutations in different genomic regions. The tool also incorporates the mutations in a provided gene regulatory network to estimate their global impact. The integration of a next-generation sequencing pipeline enables calling mutations prior to the analyses. As application example, we used MutaNET to analyze the impact of mutations in antibiotic resistance (AR) genes and their potential effect on AR of bacterial strains. MutaNET is freely available at https://sourceforge.net/projects/mutanet/. It is implemented in Python and supported on Mac OS X, Linux and MS Windows. Step-by-step instructions are available at http://service.bioinformatik.uni-saarland.de/mutanet/. volkhard.helms@bioinformatik.uni-saarland.de. Supplementary data are available at Bioinformatics online. © The Author (2017). Published by Oxford University Press. All rights reserved. For Permissions, please email: journals.permissions@oup.com

  19. TwiddleNet: Smartphones as Personal Servers

    OpenAIRE

    Gurminder, Singh; Center for the Study of Mobile Devices and Communications

    2012-01-01

    TwiddleNet uses smartphones as personal servers to enable instant content capture and dissemination for firstresponders. It supports the information sharing needs of first responders in the early stages of an emergency response operation. In TwiddleNet, content, once captured, is automatically tagged and disseminated using one of the several networking channels available in smartphones. TwiddleNet pays special attention to minimizing the equipment, network set-up time, and content...

  20. PolNet: A Tool to Quantify Network-Level Cell Polarity and Blood Flow in Vascular Remodeling.

    Science.gov (United States)

    Bernabeu, Miguel O; Jones, Martin L; Nash, Rupert W; Pezzarossa, Anna; Coveney, Peter V; Gerhardt, Holger; Franco, Claudio A

    2018-05-08

    In this article, we present PolNet, an open-source software tool for the study of blood flow and cell-level biological activity during vessel morphogenesis. We provide an image acquisition, segmentation, and analysis protocol to quantify endothelial cell polarity in entire in vivo vascular networks. In combination, we use computational fluid dynamics to characterize the hemodynamics of the vascular networks under study. The tool enables, to our knowledge for the first time, a network-level analysis of polarity and flow for individual endothelial cells. To date, PolNet has proven invaluable for the study of endothelial cell polarization and migration during vascular patterning, as demonstrated by two recent publications. Additionally, the tool can be easily extended to correlate blood flow with other experimental observations at the cellular/molecular level. We release the source code of our tool under the Lesser General Public License. Copyright © 2018 Biophysical Society. Published by Elsevier Inc. All rights reserved.

  1. Fiscal 1995 achievement report. International Clean Energy Network Using Hydrogen Conversion (WE-NET) technology

    Energy Technology Data Exchange (ETDEWEB)

    NONE

    1996-03-01

    Research and development was performed for the WE-NET (World Energy Network) project which aims to carry out hydrogen production, transportation, and supply to consumers, by the use of renewable energy. Under subtask 1, besides investigation of a pilot plant of phase 2, the WE-NET image as a whole was studied. Under subtask 2, technical information was exchanged at an international symposium and a long-term vision of the international network was discussed. Under subtask 3, for the evaluation of the effect of hydrogen energy introduction on the global level, national level, and city level, simulation models were discussed and improved. Under subtask 4, tests and studies were made concerning electrode bonding methods. Under subtask 5, the Neon Brayton cycle process was surveyed and studied as a hydrogen liquefaction cycle. Under subtasks 6-9, furthermore, surveys and studies were made about techniques relating to low-temperature substances, hydrogen energy, hydrogen combustion turbines, and so forth. (NEDO)

  2. RadNet Air Quality (Fixed Station) Data

    Data.gov (United States)

    U.S. Environmental Protection Agency — RadNet is a national network of monitoring stations that regularly collect air for analysis of radioactivity. The RadNet network, which has stations in each State,...

  3. NetMap - Creating a Map of Application Layer QoS Metrics of Mobile Networks Using Crowd Sourcing

    DEFF Research Database (Denmark)

    Mikkelsen, Lars Møller; Thomsen, Steffen Riber; Pedersen, Michael Sølvkjær

    2014-01-01

    Based on the continuous increase in network traffic on mobile networks, the large increase in smart devices, and the ever ongoing development of Internet enabled services, we argue for the need of a network performance map. In this paper NetMap is presented, which is a measurement system based...... on crowd sourcing, that utilizes end user smart devices in automatically measuring and gathering network performance metrics on mobile networks. Metrics measured include throughput, round trip times, connectivity, and signal strength, and are accompanied by a wide range of context information about...

  4. Prediction of disease causing non-synonymous SNPs by the Artificial Neural Network Predictor NetDiseaseSNP.

    Directory of Open Access Journals (Sweden)

    Morten Bo Johansen

    Full Text Available We have developed a sequence conservation-based artificial neural network predictor called NetDiseaseSNP which classifies nsSNPs as disease-causing or neutral. Our method uses the excellent alignment generation algorithm of SIFT to identify related sequences and a combination of 31 features assessing sequence conservation and the predicted surface accessibility to produce a single score which can be used to rank nsSNPs based on their potential to cause disease. NetDiseaseSNP classifies successfully disease-causing and neutral mutations. In addition, we show that NetDiseaseSNP discriminates cancer driver and passenger mutations satisfactorily. Our method outperforms other state-of-the-art methods on several disease/neutral datasets as well as on cancer driver/passenger mutation datasets and can thus be used to pinpoint and prioritize plausible disease candidates among nsSNPs for further investigation. NetDiseaseSNP is publicly available as an online tool as well as a web service: http://www.cbs.dtu.dk/services/NetDiseaseSNP.

  5. SolNet

    DEFF Research Database (Denmark)

    Jordan, Ulrike; Vajen, Klaus; Bales, Chris

    2014-01-01

    -accompanying Master courses, placements of internships, and PhD scholarship projects. A new scholarship project, “SHINE”, was launched in autumn 2013 in the frame work of the Marie Curie program of the European Union (Initial Training Network, ITN). 13 PhD-scholarships on solar district heating, solar heat......SolNet, founded in 2006, is the first coordinated International PhD education program on Solar Thermal Engineering. The SolNet network is coordinated by the Institute of Thermal Engineering at Kassel University, Germany. The network offers PhD courses on solar heating and cooling, conference...... for industrial processes, as well as sorption stores and materials started in December 2013. Additionally, the project comprises a training program with five PhD courses and several workshops on solar thermal engineering that will be open also for other PhD students working in the field. The research projects...

  6. Current Status and Future Prospect of K-NET and KiK-net

    Science.gov (United States)

    Aoi, S.; Kunugi, T.; Suzuki, W.; Nakamura, H.; Fujiwara, H.

    2014-12-01

    During 18 years since the deployment of K-NET following the Kobe earthquake, our attention has mainly focused on rapidity of the data collection and an unfailing and reliable observation. In this presentation, we review three generations of the instruments employed by K-NET and KiK-net from these two points of view.At beginning of the 2000's, we newly developed the second generation instruments (K-NET02, K-NET02A, KiK-net06) to replace the first generation instruments (K-NET95, SMAC-MDK) employed when the networks were constructed in the 1990's. These instruments have an automatic dial-out function. It takes typically 2-5 s to establish communication and a few seconds to send the pre-trigger data. After that, data is available typically within a 1.5 s delay. Not only waveform data but also strong motion indexes such as real-time intensity, PGA, PGV, PGD, and response spectra are continuously sent once a second.After the 2011 Tohoku earthquake, we have developed the third generation instruments (K-NET11, KiK-net11) and have replaced almost half of the all stations country wide. Main improvement of this instrument is more unfailing and reliable observation. Because we have often experienced very large ground motions (e.g. 45 records exceeding gravity), the maximum measureable range was expanded from 2000 gal to 4000 gal for the second generation instrument, and to 8000 gal for the third. For the third generation instrument, in case of power failure, observation (including transmission of data) works for seven days thanks to the backup battery, while for the second generation instruments it works only for one day. By adding an oblique component to the three-component accelerometers, we could automatically distinguish shaking data from noise such as electric pulses which may cause a false alarm in EEW. Implementation to guarantee the continuity of observation under severe conditions such as during the Tohoku earthquake is very important, as well as a highly efficient

  7. Systematic Review and Net-Work Meta-Analysis of Upper Gastrointestinal Hemorrhage Interventions

    Directory of Open Access Journals (Sweden)

    Mengyuan Jiang

    2016-11-01

    Full Text Available Background/Aims: Upper gastrointestinal hemorrhage (UGH is a serious medical condition which affects a large number of individuals. Endoscopic therapy accompanied by medication is a standard approach that is used to improve the prognosis of UGH patients and a few medications have been developed including proton pump inhibitors (PPIs, histamine H2 receptor antagonist (H2RA, somatostatin analogues and tranexamic acid. This study is set to compare the efficacy and safety of various medical interventions that are used to manage upper gastrointestinal bleeding. Methods: We searched PubMed, Cochrane Library, and Embase for relevant articles. Eligible studies were determined by using both the inclusion and exclusion criteria. Both traditional pair-wise meta-analysis and net-work analysis were carried out to evaluate the corresponding interventions. Results and Conclusion: PPI is an effective medication for UGH patients and intravenous PPI exhibits equivalent effectiveness and safety in comparison to oral PPI. H2RA is not recommended for UGH patients as patients treated with H2RA are associated with an increased risk of adverse events including rebleeding, need for surgery and all-cause mortality. Moreover, patients treated with H2RA exhibit an increased length of average hospital stay and blood transfusion amount compared to those treated with PPI. Tranexamic acid is also considered as another promising medication for UGH.

  8. Green Networking in Cellular HetNets: A Unified Radio Resource Management Framework with Base Station ON/OFF Switching

    KAUST Repository

    Ghazzai, Hakim

    2016-12-07

    In this paper, the problem of energy efficiency in cellular heterogeneous networks (HetNets) is investigated using radio resource and power management combined with the base station (BS) ON/OFF switching. The objective is to minimize the total power consumption of the network while satisfying the quality of service (QoS) requirements of each connected user. We consider the case of co-existing macrocell BS, small cell BSs, and private femtocell access points (FAPs). Three different network scenarios are investigated, depending on the status of the FAPs, i.e., HetNets without FAPs, HetNets with closed FAPs, and HetNets with semi-closed FAPs. A unified framework is proposed to simultaneously allocate spectrum resources to users in an energy efficient manner and switch off redundant small cell BSs. The high complexity dual decomposition technique is employed to achieve optimal solutions for the problem. A low complexity iterative algorithm is also proposed and its performances are compared to those of the optimal technique. The particularly interesting case of semi-closed FAPs, in which the FAPs accept to serve external users, achieves the highest energy efficiency due to increased degrees of freedom. In this paper, a cooperation scheme between FAPs and mobile operator is also investigated. The incentives for FAPs, e.g., renewable energy sharing and roaming prices, enabling cooperation are discussed to be considered as a useful guideline for inter-operator agreements.

  9. Green Networking in Cellular HetNets: A Unified Radio Resource Management Framework with Base Station ON/OFF Switching

    KAUST Repository

    Ghazzai, Hakim; Farooq, Muhammad Junaid; Alsharoa, Ahmad; Yaacoub, Elias; Kadri, Abdullah; Alouini, Mohamed-Slim

    2016-01-01

    In this paper, the problem of energy efficiency in cellular heterogeneous networks (HetNets) is investigated using radio resource and power management combined with the base station (BS) ON/OFF switching. The objective is to minimize the total power consumption of the network while satisfying the quality of service (QoS) requirements of each connected user. We consider the case of co-existing macrocell BS, small cell BSs, and private femtocell access points (FAPs). Three different network scenarios are investigated, depending on the status of the FAPs, i.e., HetNets without FAPs, HetNets with closed FAPs, and HetNets with semi-closed FAPs. A unified framework is proposed to simultaneously allocate spectrum resources to users in an energy efficient manner and switch off redundant small cell BSs. The high complexity dual decomposition technique is employed to achieve optimal solutions for the problem. A low complexity iterative algorithm is also proposed and its performances are compared to those of the optimal technique. The particularly interesting case of semi-closed FAPs, in which the FAPs accept to serve external users, achieves the highest energy efficiency due to increased degrees of freedom. In this paper, a cooperation scheme between FAPs and mobile operator is also investigated. The incentives for FAPs, e.g., renewable energy sharing and roaming prices, enabling cooperation are discussed to be considered as a useful guideline for inter-operator agreements.

  10. NetMOD Version 2.0 User?s Manual.

    Energy Technology Data Exchange (ETDEWEB)

    Merchant, Bion J. [Sandia National Lab. (SNL-NM), Albuquerque, NM (United States)

    2015-10-01

    NetMOD ( Net work M onitoring for O ptimal D etection) is a Java-based software package for conducting simulation of seismic, hydracoustic, and infrasonic networks. Specifically, NetMOD simulates the detection capabilities of monitoring networks. Network simulations have long been used to study network resilience to station outages and to determine where additional stations are needed to reduce monitoring thresholds. NetMOD makes use of geophysical models to determine the source characteristics, signal attenuation along the path between the source and station, and the performance and noise properties of the station. These geophysical models are combined to simulate the relative amplitudes of signal and noise that are observed at each of the stations. From these signal-to-noise ratios (SNR), the probability of detection can be computed given a detection threshold. This manual describes how to configure and operate NetMOD to perform detection simulations. In addition, NetMOD is distributed with simulation datasets for the Comprehensive Nuclear-Test-Ban Treaty Organization (CTBTO) International Monitoring System (IMS) seismic, hydroacoustic, and infrasonic networks for the purpose of demonstrating NetMOD's capabilities and providing user training. The tutorial sections of this manual use this dataset when describing how to perform the steps involved when running a simulation. ACKNOWLEDGEMENTS We would like to thank the reviewers of this document for their contributions.

  11. Molecular surveillance of norovirus, 2005-16: an epidemiological analysis of data collected from the NoroNet network.

    NARCIS (Netherlands)

    van Beek, Janko; de Graaf, Miranda; Al-Hello, Haider; Allen, David J; Ambert-Balay, Katia; Botteldoorn, Nadine; Brytting, Mia; Buesa, Javier; Cabrerizo, Maria; Chan, Martin; Cloak, Fiona; Di Bartolo, Ilaria; Guix, Susana; Hewitt, Joanne; Iritani, Nobuhiro; Jin, Miao; Johne, Reimar; Lederer, Ingeborg; Mans, Janet; Martella, Vito; Maunula, Leena; McAllister, Georgina; Niendorf, Sandra; Niesters, Hubert G; Podkolzin, Alexander T; Poljsak-Prijatelj, Mateja; Rasmussen, Lasse Dam; Reuter, Gábor; Tuite, Gráinne; Kroneman, Annelies; Vennema, Harry; Koopmans, Marion P G

    2018-01-01

    The development of a vaccine for norovirus requires a detailed understanding of global genetic diversity of noroviruses. We analysed their epidemiology and diversity using surveillance data from the NoroNet network.

  12. Conversion of Continuous-Valued Deep Networks to Efficient Event-Driven Networks for Image Classification.

    Science.gov (United States)

    Rueckauer, Bodo; Lungu, Iulia-Alexandra; Hu, Yuhuang; Pfeiffer, Michael; Liu, Shih-Chii

    2017-01-01

    Spiking neural networks (SNNs) can potentially offer an efficient way of doing inference because the neurons in the networks are sparsely activated and computations are event-driven. Previous work showed that simple continuous-valued deep Convolutional Neural Networks (CNNs) can be converted into accurate spiking equivalents. These networks did not include certain common operations such as max-pooling, softmax, batch-normalization and Inception-modules. This paper presents spiking equivalents of these operations therefore allowing conversion of nearly arbitrary CNN architectures. We show conversion of popular CNN architectures, including VGG-16 and Inception-v3, into SNNs that produce the best results reported to date on MNIST, CIFAR-10 and the challenging ImageNet dataset. SNNs can trade off classification error rate against the number of available operations whereas deep continuous-valued neural networks require a fixed number of operations to achieve their classification error rate. From the examples of LeNet for MNIST and BinaryNet for CIFAR-10, we show that with an increase in error rate of a few percentage points, the SNNs can achieve more than 2x reductions in operations compared to the original CNNs. This highlights the potential of SNNs in particular when deployed on power-efficient neuromorphic spiking neuron chips, for use in embedded applications.

  13. Conversion of Continuous-Valued Deep Networks to Efficient Event-Driven Networks for Image Classification

    Directory of Open Access Journals (Sweden)

    Bodo Rueckauer

    2017-12-01

    Full Text Available Spiking neural networks (SNNs can potentially offer an efficient way of doing inference because the neurons in the networks are sparsely activated and computations are event-driven. Previous work showed that simple continuous-valued deep Convolutional Neural Networks (CNNs can be converted into accurate spiking equivalents. These networks did not include certain common operations such as max-pooling, softmax, batch-normalization and Inception-modules. This paper presents spiking equivalents of these operations therefore allowing conversion of nearly arbitrary CNN architectures. We show conversion of popular CNN architectures, including VGG-16 and Inception-v3, into SNNs that produce the best results reported to date on MNIST, CIFAR-10 and the challenging ImageNet dataset. SNNs can trade off classification error rate against the number of available operations whereas deep continuous-valued neural networks require a fixed number of operations to achieve their classification error rate. From the examples of LeNet for MNIST and BinaryNet for CIFAR-10, we show that with an increase in error rate of a few percentage points, the SNNs can achieve more than 2x reductions in operations compared to the original CNNs. This highlights the potential of SNNs in particular when deployed on power-efficient neuromorphic spiking neuron chips, for use in embedded applications.

  14. Implementing NetScaler VPX

    CERN Document Server

    Sandbu, Marius

    2014-01-01

    An easy-to-follow guide with detailed step-by step-instructions on how to implement the different key components in NetScaler, with real-world examples and sample scenarios.If you are a Citrix or network administrator who needs to implement NetScaler in your virtual environment to gain an insight on its functionality, this book is ideal for you. A basic understanding of networking and familiarity with some of the different Citrix products such as XenApp or XenDesktop is a prerequisite.

  15. NetMOD Version 2.0 Parameters

    Energy Technology Data Exchange (ETDEWEB)

    Merchant, Bion J. [Sandia National Lab. (SNL-NM), Albuquerque, NM (United States)

    2015-08-01

    NetMOD ( Net work M onitoring for O ptimal D etection) is a Java-based software package for conducting simulation of seismic, hydroacoustic and infrasonic networks. Network simulations have long been used to study network resilience to station outages and to determine where additional stations are needed to reduce monitoring thresholds. NetMOD makes use of geophysical models to determine the source characteristics, signal attenuation along the path between the source and station, and the performance and noise properties of the station. These geophysical models are combined to simulate the relative amplitudes of signal and noise that are observed at each of the stations. From these signal-to-noise ratios (SNR), the probability of detection can be computed given a detection threshold. This document describes the parameters that are used to configure the NetMOD tool and the input and output parameters that make up the simulation definitions.

  16. First results of registering ionospheric disturbances obtained with SibNet network of GNSS receivers in active space experiments

    Science.gov (United States)

    Ishin, Artem; Perevalova, Natalia; Voeykov, Sergey; Khakhinov, Vitaliy

    2017-12-01

    Global and regional networks of GNSS receivers have been successfully used for geophysical research for many years; the number of continuous GNSS stations in the world is steadily growing. The article presents the first results of the use of a new regional network of GNSS stations (SibNet) in active space experiments. The Institute of Solar-Terrestrial Physics of Siberian Branch of Russian Academy of Sciences (ISTP SB RAS) has established this network in the South Baikal region. We describe in detail SibNet, characteristics of receivers in use, parameters of antennas and methods of their installation. We also present the general structure of observation site and the plot of coverage of the receiver operating zone at 50-55° latitudes by radio paths. It is shown that the selected location of receivers allows us to detect ionospheric irregularities of various scales. The purpose of the active space experiments was to reveal and record parameters of the ionospheric irregu larities caused by effects from jet streams of Progress cargo spacecraft. The mapping technique enabled us to identify weak, vertically localized ionospheric irregularities and associate them with the Progress spacecraft engine impact. Thus, it has been shown that SibNet deployed in the Southern Baikal region is an effective instrument for monitoring ionospheric conditions.

  17. NetMOD version 1.0 user's manual

    Energy Technology Data Exchange (ETDEWEB)

    Merchant, Bion John [Sandia National Lab. (SNL-NM), Albuquerque, NM (United States)

    2014-01-01

    NetMOD (Network Monitoring for Optimal Detection) is a Java-based software package for conducting simulation of seismic networks. Specifically, NetMOD simulates the detection capabilities of seismic monitoring networks. Network simulations have long been used to study network resilience to station outages and to determine where additional stations are needed to reduce monitoring thresholds. NetMOD makes use of geophysical models to determine the source characteristics, signal attenuation along the path between the source and station, and the performance and noise properties of the station. These geophysical models are combined to simulate the relative amplitudes of signal and noise that are observed at each of the stations. From these signal-to-noise ratios (SNR), the probability of detection can be computed given a detection threshold. This manual describes how to configure and operate NetMOD to perform seismic detection simulations. In addition, NetMOD is distributed with a simulation dataset for the Comprehensive Nuclear-Test-Ban Treaty Organization (CTBTO) International Monitoring System (IMS) seismic network for the purpose of demonstrating NetMOD's capabilities and providing user training. The tutorial sections of this manual use this dataset when describing how to perform the steps involved when running a simulation.

  18. Internet application: production-technical information system MoNET

    International Nuclear Information System (INIS)

    Tomiga, J.

    2004-01-01

    MoNET is the production-technical information system supporting engineering, operational and maintenance processes of distribution network administrator. It utilizes the model of distribution network that is situated in the geo-space relational database. The geo-space database represents an information base of operational-technical processes. It contains elements and equipment s of the distribution network, failures, operational events, maintenance records, but also, parcels, reference planimetry, e.g. and other subjects for which is relevant the positional datum - geo-space information. MoNET is typically exploited in the fields: - evidence of the subjects and equipment of network, technical documentation; - property administration; - planning of network development, support of designing and construction; - technical calculation; - breakdown controller centre; - maintenance management. MoNET can be implemented as the desktop application, however its first benefit is derived from its usage as the intranet application MoNET WEB for the whole enterprise or organisation. This version enables an unrestricted number of end-users to enter this system. The end-users don't need any special software to enter the data of MoNet WEB application, the pre-installed Internet Explorer will do. (author)

  19. The economic effect of electricity net-metering with solar PV: Consequences for network cost recovery, cross subsidies and policy objectives

    International Nuclear Information System (INIS)

    Eid, Cherrelle; Reneses Guillén, Javier; Frías Marín, Pablo; Hakvoort, Rudi

    2014-01-01

    Net-metering is commonly known as a practice by which owners of distributed generation (DG) units may offset their electricity consumption from the grid with local generation. The increasing number of prosumers (consumers that both produce and consume electricity) with solar photovoltaic (PV) generation combined with net-metering results in reduced incomes for many network utilities worldwide. Consequently, this pushes utilities to increase charges per kW h in order to recover costs. For non-PV owners, this could result into inequality issues due to the fact that also non-PV owners have to pay higher chargers for their electricity consumed to make up for netted costs of PV-owners. In order to provide insight in those inequality issues caused by net-metering, this study presents the effects on cross-subsidies, cost recovery and policy objectives evolving from different applied netmetering and tariff designs for a residential consumer. Eventually this paper provides recommendations regarding tariffs and metering that will result in more explicit incentives for PV, instead of the current implicit incentives which are present to PV owners due to net-metering. - Highlights: • Network users are frequently charged by energy charging and fixed charging. • Net-metering with energy charging causes potential problems for DSO cost recovery. • Increasing rolling credit timeframes amplify net-metering impacts on cost recovery. • Observed capacity charging can incentivize local storage and self-consumption. • PV owners should receive direct incentives in order to avoid cross subsidization

  20. Prediction of Disease Causing Non-Synonymous SNPs by the Artificial Neural Network Predictor NetDiseaseSNP

    DEFF Research Database (Denmark)

    Johansen, Morten Bo; Gonzalez-Izarzugaza, Jose Maria; Brunak, Søren

    2013-01-01

    We have developed a sequence conservation-based artificial neural network predictor called NetDiseaseSNP which classifies nsSNPs as disease-causing or neutral. Our method uses the excellent alignment generation algorithm of SIFT to identify related sequences and a combination of 31 features...

  1. Revenue-Maximizing Radio Access Technology Selection with Net Neutrality Compliance in Heterogeneous Wireless Networks

    Directory of Open Access Journals (Sweden)

    Elissar Khloussy

    2018-01-01

    Full Text Available The net neutrality principle states that users should have equal access to all Internet content and that Internet Service Providers (ISPs should not practice differentiated treatment on any of the Internet traffic. While net neutrality aims to restrain any kind of discrimination, it also grants exemption to a certain category of traffic known as specialized services (SS, by allowing the ISP to dedicate part of the resources for the latter. In this work, we consider a heterogeneous LTE/WiFi wireless network and we investigate revenue-maximizing Radio Access Technology (RAT selection strategies that are net neutrality-compliant, with exemption granted to SS traffic. Our objective is to find out how the bandwidth reservation for SS traffic would be made in a way that allows maximizing the revenue while being in compliance with net neutrality and how the choice of the ratio of reserved bandwidth would affect the revenue. The results show that reserving bandwidth for SS traffic in one RAT (LTE can achieve higher revenue. On the other hand, when the capacity is reserved across both LTE and WiFi, higher social benefit in terms of number of admitted users can be realized, as well as lower blocking probability for the Internet access traffic.

  2. Seismic Monitoring with NetQuakes: The First 75 in the Pacific Northwest

    Science.gov (United States)

    Bodin, P.; Vidale, J. E.; Luetgert, J. H.; Malone, S. D.; Delorey, A. A.; Steele, W. P.; Gibbons, D. A.; Walsh, L. K.

    2011-12-01

    NetQuakes accelerographs are relatively inexpensive Internet-aware appliances that we are using as part of our regional seismic monitoring program in the Pacific Northwest Seismic Network (PNSN). To date we have deployed approximately 65 units. By the end of 2011, we will have at least 75 systems sited and operating. The instruments are made by Swiss manufacturer GeoSig, Ltd., and have been obtained by PNSN through several cooperative programs with the US Geological Survey (USGS). The NetQuakes systems have increased the number of strong-motion stations in the Pacific Northwest by ~50%. NetQuakes instruments connect to the Internet via wired or wireless telemetry, obtain accurate timing vie Network Time Protocol, and are designed to be located in the ground floor of houses or small buildings. At PNSN we have concentrated on finding NetQuakes hosts by having technologically savvy homeowners self-identify as a response to news reports about the NetQuakes project. Potential hosts are prioritized by their proximity to target sites provided by a regional panel of experts who studied the region's strong-ground-motion monitoring needs. Recorded waveforms, triggered by strong motion or retrieved from a buffer of continuous data, are transmitted to Menlo Park, and then on to PNSN in Seattle. Data are available with latency of a few minutes to a little over an hour, and are automatically incorporated with the rest of PNSN network data for analysis and the generation of earthquake products. Triggered data may also be viewed by the public via the USGS website, [http://earthquake.usgs.gov/monitoring/netquakes/map/pacnw]. We present examples of ground motion recordings returned to date. Local earthquakes up to M4 (at a distance of ~60 km) reveal interesting patterns of local site effects. The 11 March M9 Tohoku, Japan earthquake produced ground motions recorded on the PNSN accelerographs, including many NetQuakes systems, that reveal the extent and severity of basin

  3. Using CNLS-net [Connectionist Normalized Local Spline-network] to predict the Mackey-Glass chaotic time series

    International Nuclear Information System (INIS)

    Mead, W.C.; Jones, R.D.; Barnes, C.W.; Lee, L.A.; O'Rourke, M.K.; Lee, Y.C.; Flake, G.W.

    1991-01-01

    We use the Connectionist Normalized Local Spline (CNLS) network to learn the dynamics of the Mackey-Glass time-delay differential equation, for the case τ = 30. We show the optimum network operating mode and determine the accuracy and robustness of predictions. We obtain pedictions of varying accuracy using some 2--120 minutes of execution time on a Sun SPARC-1 workstation. CNLS-net is capable of very good performance in predicting the Mackey-Glass time series. 11 refs., 4 figs

  4. Limitations of shallow nets approximation.

    Science.gov (United States)

    Lin, Shao-Bo

    2017-10-01

    In this paper, we aim at analyzing the approximation abilities of shallow networks in reproducing kernel Hilbert spaces (RKHSs). We prove that there is a probability measure such that the achievable lower bound for approximating by shallow nets can be realized for all functions in balls of reproducing kernel Hilbert space with high probability, which is different with the classical minimax approximation error estimates. This result together with the existing approximation results for deep nets shows the limitations for shallow nets and provides a theoretical explanation on why deep nets perform better than shallow nets. Copyright © 2017 Elsevier Ltd. All rights reserved.

  5. Molecular surveillance of norovirus, 2005-16 : an epidemiological analysis of data collected from the NoroNet network

    NARCIS (Netherlands)

    van Beek, Janko; de Graaf, Miranda; Al-Hello, Haider; Allen, David J; Ambert-Balay, Katia; Botteldoorn, Nadine; Brytting, Mia; Buesa, Javier; Cabrerizo, Maria; Chan, Martin; Cloak, Fiona; Di Bartolo, Ilaria; Guix, Susana; Hewitt, Joanne; Iritani, Nobuhiro; Jin, Miao; Johne, Reimar; Lederer, Ingeborg; Mans, Janet; Martella, Vito; Maunula, Leena; McAllister, Georgina; Niendorf, Sandra; Niesters, Hubert G; Podkolzin, Alexander T; Poljsak-Prijatelj, Mateja; Rasmussen, Lasse Dam; Reuter, Gábor; Tuite, Gráinne; Kroneman, Annelies; Vennema, Harry; Koopmans, Marion P G

    BACKGROUND: The development of a vaccine for norovirus requires a detailed understanding of global genetic diversity of noroviruses. We analysed their epidemiology and diversity using surveillance data from the NoroNet network. METHODS: We included genetic sequences of norovirus specimens obtained

  6. Validation and correction of rainfall data from the WegenerNet high density network in southeast Austria

    Science.gov (United States)

    O, Sungmin; Foelsche, U.; Kirchengast, G.; Fuchsberger, J.

    2018-01-01

    Eight years of daily rainfall data from WegenerNet were analyzed by comparison with data from Austrian national weather stations. WegenerNet includes 153 ground level weather stations in an area of about 15 km × 20 km in the Feldbach region in southeast Austria. Rainfall has been measured by tipping bucket gauges at 150 stations of the network since the beginning of 2007. Since rain gauge measurements are considered close to true rainfall, there are increasing needs for WegenerNet data for the validation of rainfall data products such as remote sensing based estimates or model outputs. Serving these needs, this paper aims at providing a clearer interpretation on WegenerNet rainfall data for users in hydro-meteorological communities. Five clusters - a cluster consists of one national weather station and its four closest WegenerNet stations - allowed us close comparison of datasets between the stations. Linear regression analysis and error estimation with statistical indices were conducted to quantitatively evaluate the WegenerNet daily rainfall data. It was found that rainfall data between the stations show good linear relationships with an average correlation coefficient (r) of 0.97 , while WegenerNet sensors tend to underestimate rainfall according to the regression slope (0.87). For the five clusters investigated, the bias and relative bias were - 0.97 mm d-1 and - 11.5 % on average (except data from new sensors). The average of bias and relative bias, however, could be reduced by about 80 % through a simple linear regression-slope correction, with the assumption that the underestimation in WegenerNet data was caused by systematic errors. The results from the study have been employed to improve WegenerNet data for user applications so that a new version of the data (v5) is now available at the WegenerNet data portal (www.wegenernet.org).

  7. Evaluating the Use of Remote Sensing Data in the USAID Famine Early Warning Systems Network

    Science.gov (United States)

    Brown, Molly E.; Brickley, Elizabeth B.

    2011-01-01

    The US Agency for International Development (USAID) s Famine Early Warning System Network (FEWS NET) provides monitoring and early warning support to decision makers responsible for responding to food insecurity emergencies on three continents. FEWS NET uses satellite remote sensing and ground observations of rainfall and vegetation in order to provide information on drought, floods and other extreme weather events to decision makers. Previous research has presented results from a professional review questionnaire with FEWS NET expert end-users whose focus was to elicit Earth observation requirements. The review provided FEWS NET operational requirements and assessed the usefulness of additional remote sensing data. Here we analyzed 1342 food security update reports from FEWS NET. The reports consider the biophysical, socioeconomic, and contextual influences on the food security in 17 countries in Africa from 2000-2009. The objective was to evaluate the use of remote sensing information in comparison with other important factors in the evaluation of food security crises. The results show that all 17 countries use rainfall information, agricultural production statistics, food prices and food access parameters in their analysis of food security problems. The reports display large scale patterns that are strongly related to history of the FEWS NET program in each country. We found that rainfall data was used 84% of the time, remote sensing of vegetation 28% of the time, and gridded crop models 10%, reflecting the length of use of each product in the regions. More investment is needed in training personnel on remote sensing products to improve use of data products throughout the FEWS NET system.

  8. MetNet Network Mission for Martian Atmospheric Investigations

    Science.gov (United States)

    Harri, A.-M.; Alexashkin, S.; Arrugeo, I.; Schmidt, W.; Vazquez, L.; Genzer, M.; Haukka, H.

    2014-07-01

    A new kind of planetary exploration mission for Mars called MetNet is being developed for martian atmospheric investigations. The eventual scope of the MetNet Mission is to deploy tens of small landers on the martian surface.

  9. FY 2000 Project of international clean energy network using hydrogen conversion (WE-NET)

    Energy Technology Data Exchange (ETDEWEB)

    NONE

    2001-03-01

    Described herein are the FY 2000 results of the research and development project aimed at construction of the international clean energy network using hydrogen conversion (WE-NET). The projects include 12 tasks; system evaluation for, e.g., optimum scenario for introduction of hydrogen energy; experiments for hydrogen safety; study on the international cooperation for WE-NET; development of power generation technology using a 100kW cogeneration system including hydrogen-firing diesel engine; developmental research on vehicles driven by a hydrogen fuel cell system; developmental research on the basic technologies for PEFC utilizing pure hydrogen; developmental research on a 30Nm{sup 3}/hour hydrogen refueling station for vehicles; developmental research on hydrogen production technology; developmental research on hydrogen transportation and storage technology, e.g., liquid hydrogen pump; research and development of the databases of and processing technology for cryogenic materials exposed to liquid hydrogen; developmental research on hydrogen absorbing alloys for small-scale hydrogen transportation and storage systems; and study on innovative and leading technologies. (NEDO)

  10. Net neutrality and audiovisual services

    OpenAIRE

    van Eijk, N.; Nikoltchev, S.

    2011-01-01

    Net neutrality is high on the European agenda. New regulations for the communication sector provide a legal framework for net neutrality and need to be implemented on both a European and a national level. The key element is not just about blocking or slowing down traffic across communication networks: the control over the distribution of audiovisual services constitutes a vital part of the problem. In this contribution, the phenomenon of net neutrality is described first. Next, the European a...

  11. NetBenchmark: a bioconductor package for reproducible benchmarks of gene regulatory network inference.

    Science.gov (United States)

    Bellot, Pau; Olsen, Catharina; Salembier, Philippe; Oliveras-Vergés, Albert; Meyer, Patrick E

    2015-09-29

    In the last decade, a great number of methods for reconstructing gene regulatory networks from expression data have been proposed. However, very few tools and datasets allow to evaluate accurately and reproducibly those methods. Hence, we propose here a new tool, able to perform a systematic, yet fully reproducible, evaluation of transcriptional network inference methods. Our open-source and freely available Bioconductor package aggregates a large set of tools to assess the robustness of network inference algorithms against different simulators, topologies, sample sizes and noise intensities. The benchmarking framework that uses various datasets highlights the specialization of some methods toward network types and data. As a result, it is possible to identify the techniques that have broad overall performances.

  12. ConvNetQuake: Convolutional Neural Network for Earthquake Detection and Location

    Science.gov (United States)

    Denolle, M.; Perol, T.; Gharbi, M.

    2017-12-01

    Over the last decades, the volume of seismic data has increased exponentially, creating a need for efficient algorithms to reliably detect and locate earthquakes. Today's most elaborate methods scan through the plethora of continuous seismic records, searching for repeating seismic signals. In this work, we leverage the recent advances in artificial intelligence and present ConvNetQuake, a highly scalable convolutional neural network for probabilistic earthquake detection and location from single stations. We apply our technique to study two years of induced seismicity in Oklahoma (USA). We detect 20 times more earthquakes than previously cataloged by the Oklahoma Geological Survey. Our algorithm detection performances are at least one order of magnitude faster than other established methods.

  13. Advancing medical device innovation through collaboration and coordination of structured data capture pilots: Report from the Medical Device Epidemiology Network (MDEpiNet) Specific, Measurable, Achievable, Results-Oriented, Time Bound (SMART) Think Tank.

    Science.gov (United States)

    Reed, Terrie L; Drozda, Joseph P; Baskin, Kevin M; Tcheng, James; Conway, Karen; Wilson, Natalia; Marinac-Dabic, Danica; Heise, Theodore; Krucoff, Mitchell W

    2017-12-01

    The Medical Device Epidemiology Network (MDEpiNet) is a public private partnership (PPP) that provides a platform for collaboration on medical device evaluation and depth of expertise for supporting pilots to capture, exchange and use device information for improving device safety and protecting public health. The MDEpiNet SMART Think Tank, held in February, 2013, sought to engage expert stakeholders who were committed to improving the capture of device data, including Unique Device Identification (UDI), in key electronic health information. Prior to the Think Tank there was limited collaboration among stakeholders beyond a few single health care organizations engaged in electronic capture and exchange of device data. The Think Tank resulted in what has become two sustainable multi-stakeholder device data capture initiatives, BUILD and VANGUARD. These initiatives continue to mature within the MDEpiNet PPP structure and are well aligned with the goals outlined in recent FDA-initiated National Medical Device Planning Board and Medical Device Registry Task Force white papers as well as the vision for the National Evaluation System for health Technology.%. Published by Elsevier Inc.

  14. Turkey's net energy consumption

    International Nuclear Information System (INIS)

    Soezen, Adnan; Arcaklioglu, Erol; Oezkaymak, Mehmet

    2005-01-01

    The main goal of this study is to develop the equations for forecasting net energy consumption (NEC) using an artificial neural-network (ANN) technique in order to determine the future level of energy consumption in Turkey. In this study, two different models were used in order to train the neural network. In one of them, population, gross generation, installed capacity and years are used in the input layer of the network (Model 1). Other energy sources are used in input layer of network (Model 2). The net energy consumption is in the output layer for two models. Data from 1975 to 2003 are used for the training. Three years (1981, 1994 and 2003) are used only as test data to confirm this method. The statistical coefficients of multiple determinations (R 2 -value) for training data are equal to 0.99944 and 0.99913 for Models 1 and 2, respectively. Similarly, R 2 values for testing data are equal to 0.997386 and 0.999558 for Models 1 and 2, respectively. According to the results, the net energy consumption using the ANN technique has been predicted with acceptable accuracy. Apart from reducing the whole time required, with the ANN approach, it is possible to find solutions that make energy applications more viable and thus more attractive to potential users. It is also expected that this study will be helpful in developing highly applicable energy policies

  15. Drainage network extraction from a high-resolution DEM using parallel programming in the .NET Framework

    Science.gov (United States)

    Du, Chao; Ye, Aizhong; Gan, Yanjun; You, Jinjun; Duan, Qinyun; Ma, Feng; Hou, Jingwen

    2017-12-01

    High-resolution Digital Elevation Models (DEMs) can be used to extract high-accuracy prerequisite drainage networks. A higher resolution represents a larger number of grids. With an increase in the number of grids, the flow direction determination will require substantial computer resources and computing time. Parallel computing is a feasible method with which to resolve this problem. In this paper, we proposed a parallel programming method within the .NET Framework with a C# Compiler in a Windows environment. The basin is divided into sub-basins, and subsequently the different sub-basins operate on multiple threads concurrently to calculate flow directions. The method was applied to calculate the flow direction of the Yellow River basin from 3 arc-second resolution SRTM DEM. Drainage networks were extracted and compared with HydroSHEDS river network to assess their accuracy. The results demonstrate that this method can calculate the flow direction from high-resolution DEMs efficiently and extract high-precision continuous drainage networks.

  16. In-beam experience with a highly granular DAQ and control network: TrbNet

    International Nuclear Information System (INIS)

    Michel, J; Korcyl, G; Maier, L; Traxler, M

    2013-01-01

    Virtually all Data Acquisition Systems (DAQ) for nuclear and particle physics experiments use a large number of Field Programmable Gate Arrays (FPGAs) for data transport and more complex tasks as pattern recognition and data reduction. All these FPGAs in a large system have to share a common state like a trigger number or an epoch counter to keep the system synchronized for a consistent event/epoch building. Additionally, the collected data has to be transported with high bandwidth, optionally via the ubiquitous Ethernet protocol. Furthermore, the FPGAs' internal states and configuration memories have to be accessed for control and monitoring purposes. Another requirement for a modern DAQ-network is the fault-tolerance for intermittent data errors in the form of automatic retransmission of faulty data. As FPGAs suffer from Single Event Effects when exposed to ionizing particles, the system has to deal with failing FPGAs. The TrbNet protocol was developed taking all these requirements into account. Three virtual channels are merged on one physical medium: The trigger/epoch information is transported with the highest priority. The data channel is second in the priority order, while the control channel is the last. Combined with a small frame size of 80 bit this guarantees a low latency data transport: A system with 100 front-ends can be built with a one-way latency of 2.2 us. The TrbNet-protocol was implemented in each of the 550 FPGAs of the HADES upgrade project and has been successfully used during the Au+Au campaign in April 2012. With 2⋅10 6 /s Au-ions and 3% interaction ratio the accepted trigger rate is 10 kHz while data is written to storage with 150 MBytes/s. Errors are reliably mitigated via the implemented retransmission of packets and auto-shut-down of individual links. TrbNet was also used for full monitoring of the FEE status. The network stack is written in VHDL and was successfully deployed on various Lattice and Xilinx devices. The TrbNet is also

  17. In-beam experience with a highly granular DAQ and control network: TrbNet

    Science.gov (United States)

    Michel, J.; Korcyl, G.; Maier, L.; Traxler, M.

    2013-02-01

    Virtually all Data Acquisition Systems (DAQ) for nuclear and particle physics experiments use a large number of Field Programmable Gate Arrays (FPGAs) for data transport and more complex tasks as pattern recognition and data reduction. All these FPGAs in a large system have to share a common state like a trigger number or an epoch counter to keep the system synchronized for a consistent event/epoch building. Additionally, the collected data has to be transported with high bandwidth, optionally via the ubiquitous Ethernet protocol. Furthermore, the FPGAs' internal states and configuration memories have to be accessed for control and monitoring purposes. Another requirement for a modern DAQ-network is the fault-tolerance for intermittent data errors in the form of automatic retransmission of faulty data. As FPGAs suffer from Single Event Effects when exposed to ionizing particles, the system has to deal with failing FPGAs. The TrbNet protocol was developed taking all these requirements into account. Three virtual channels are merged on one physical medium: The trigger/epoch information is transported with the highest priority. The data channel is second in the priority order, while the control channel is the last. Combined with a small frame size of 80 bit this guarantees a low latency data transport: A system with 100 front-ends can be built with a one-way latency of 2.2 us. The TrbNet-protocol was implemented in each of the 550 FPGAs of the HADES upgrade project and has been successfully used during the Au+Au campaign in April 2012. With 2ṡ106/s Au-ions and 3% interaction ratio the accepted trigger rate is 10 kHz while data is written to storage with 150 MBytes/s. Errors are reliably mitigated via the implemented retransmission of packets and auto-shut-down of individual links. TrbNet was also used for full monitoring of the FEE status. The network stack is written in VHDL and was successfully deployed on various Lattice and Xilinx devices. The TrbNet is also

  18. MicroRadarNet: A network of weather micro radars for the identification of local high resolution precipitation patterns

    Science.gov (United States)

    Turso, S.; Paolella, S.; Gabella, M.; Perona, G.

    2013-01-01

    In this paper, MicroRadarNet, a novel micro radar network for continuous, unattended meteorological monitoring is presented. Key aspects and constraints are introduced. Specific design strategies are highlighted, leading to the technological implementations of this wireless, low-cost, low power consumption sensor network. Raw spatial and temporal datasets are processed on-board in real-time, featuring a consistent evaluation of the signals from the sensors and optimizing the data loads to be transmitted. Network servers perform the final post-elaboration steps on the data streams coming from each unit. Final network products are meteorological mappings of weather events, monitored with high spatial and temporal resolution, and lastly served to the end user through any Web browser. This networked approach is shown to imply a sensible reduction of the overall operational costs, including management and maintenance aspects, if compared to the traditional long range monitoring strategy. Adoption of the TITAN storm identification and nowcasting engine is also here evaluated for in-loop integration within the MicroRadarNet data processing chain. A brief description of the engine workflow is provided, to present preliminary feasibility results and performance estimates. The outcomes were not so predictable, taking into account relevant operational differences between a Western Alps micro radar scenario and the long range radar context in the Denver region of Colorado. Finally, positive results from a set of case studies are discussed, motivating further refinements and integration activities.

  19. Assessing computational genomics skills: Our experience in the H3ABioNet African bioinformatics network.

    Science.gov (United States)

    Jongeneel, C Victor; Achinike-Oduaran, Ovokeraye; Adebiyi, Ezekiel; Adebiyi, Marion; Adeyemi, Seun; Akanle, Bola; Aron, Shaun; Ashano, Efejiro; Bendou, Hocine; Botha, Gerrit; Chimusa, Emile; Choudhury, Ananyo; Donthu, Ravikiran; Drnevich, Jenny; Falola, Oluwadamila; Fields, Christopher J; Hazelhurst, Scott; Hendry, Liesl; Isewon, Itunuoluwa; Khetani, Radhika S; Kumuthini, Judit; Kimuda, Magambo Phillip; Magosi, Lerato; Mainzer, Liudmila Sergeevna; Maslamoney, Suresh; Mbiyavanga, Mamana; Meintjes, Ayton; Mugutso, Danny; Mpangase, Phelelani; Munthali, Richard; Nembaware, Victoria; Ndhlovu, Andrew; Odia, Trust; Okafor, Adaobi; Oladipo, Olaleye; Panji, Sumir; Pillay, Venesa; Rendon, Gloria; Sengupta, Dhriti; Mulder, Nicola

    2017-06-01

    The H3ABioNet pan-African bioinformatics network, which is funded to support the Human Heredity and Health in Africa (H3Africa) program, has developed node-assessment exercises to gauge the ability of its participating research and service groups to analyze typical genome-wide datasets being generated by H3Africa research groups. We describe a framework for the assessment of computational genomics analysis skills, which includes standard operating procedures, training and test datasets, and a process for administering the exercise. We present the experiences of 3 research groups that have taken the exercise and the impact on their ability to manage complex projects. Finally, we discuss the reasons why many H3ABioNet nodes have declined so far to participate and potential strategies to encourage them to do so.

  20. IntNetLncSim: an integrative network analysis method to infer human lncRNA functional similarity.

    Science.gov (United States)

    Cheng, Liang; Shi, Hongbo; Wang, Zhenzhen; Hu, Yang; Yang, Haixiu; Zhou, Chen; Sun, Jie; Zhou, Meng

    2016-07-26

    Increasing evidence indicated that long non-coding RNAs (lncRNAs) were involved in various biological processes and complex diseases by communicating with mRNAs/miRNAs each other. Exploiting interactions between lncRNAs and mRNA/miRNAs to lncRNA functional similarity (LFS) is an effective method to explore function of lncRNAs and predict novel lncRNA-disease associations. In this article, we proposed an integrative framework, IntNetLncSim, to infer LFS by modeling the information flow in an integrated network that comprises both lncRNA-related transcriptional and post-transcriptional information. The performance of IntNetLncSim was evaluated by investigating the relationship of LFS with the similarity of lncRNA-related mRNA sets (LmRSets) and miRNA sets (LmiRSets). As a result, LFS by IntNetLncSim was significant positively correlated with the LmRSet (Pearson correlation γ2=0.8424) and LmiRSet (Pearson correlation γ2=0.2601). Particularly, the performance of IntNetLncSim is superior to several previous methods. In the case of applying the LFS to identify novel lncRNA-disease relationships, we achieved an area under the ROC curve (0.7300) in experimentally verified lncRNA-disease associations based on leave-one-out cross-validation. Furthermore, highly-ranked lncRNA-disease associations confirmed by literature mining demonstrated the excellent performance of IntNetLncSim. Finally, a web-accessible system was provided for querying LFS and potential lncRNA-disease relationships: http://www.bio-bigdata.com/IntNetLncSim.

  1. NetPICOmag: A low-cost networked magnetometer and its applications

    Science.gov (United States)

    Schofield, I.; Connors, M.; Russell, C. T.

    2012-03-01

    NetPICOmag (NPM) is the culmination of a design effort to build a compact, low-cost, laboratory-grade, networked magnetometer designed for remote autonomous operation, suited for research and education. NPM allows wide placement of magnetometers sensitive enough to detect auroral activity and the daily variation, and is suitable for education projects and a range of geophysical applications. The use of networked microcontrollers and GPS timing is applicable to other small instruments for field or local deployment, and an onboard data logging capability has also been demonstrated. We illustrate the value of the placement of low-cost magnetometers to increase coverage in an area through the study of a Pc 5 pulsation event which took place on September 4, 2010. By combining results with those from auroral zone magnetometers supporting the THEMIS project, we find that the phase velocity of these morning sector pulsations was northward on the ground. The event took place under very quiet solar wind conditions, and credible mapping associates it with the inner magnetosphere. Another aspect beyond increasing areal coverage is increasing density of coverage, which becomes feasible with instruments of very low cost. We examine aspects of the April 5, 2010 space weather event which are possible to deduce from closely spaced magnetometers.

  2. RadNet Air Data From Sacramento, CA

    Science.gov (United States)

    This page presents radiation air monitoring and air filter analysis data for Sacramento, CA from EPA's RadNet system. RadNet is a nationwide network of monitoring stations that measure radiation in air, drinking water and precipitation.

  3. RadNet Air Data From Honolulu, HI

    Science.gov (United States)

    This page presents radiation air monitoring and air filter analysis data for Honolulu, HI from EPA's RadNet system. RadNet is a nationwide network of monitoring stations that measure radiation in air, drinking water and precipitation.

  4. RadNet Air Data From Houston, TX

    Science.gov (United States)

    This page presents radiation air monitoring and air filter analysis data for Houston, TX from EPA's RadNet system. RadNet is a nationwide network of monitoring stations that measure radiation in air, drinking water and precipitation.

  5. RadNet Air Data From Austin, TX

    Science.gov (United States)

    This page presents radiation air monitoring and air filter analysis data for Austin, TX from EPA's RadNet system. RadNet is a nationwide network of monitoring stations that measure radiation in air, drinking water and precipitation.

  6. RadNet Air Data From Orlando, FL

    Science.gov (United States)

    This page presents radiation air monitoring and air filter analysis data for Orlando, FL from EPA's RadNet system. RadNet is a nationwide network of monitoring stations that measure radiation in air, drinking water and precipitation.

  7. Net Locality

    DEFF Research Database (Denmark)

    de Souza e Silva, Adriana Araujo; Gordon, Eric

    Provides an introduction to the new theory of Net Locality and the profound effect on individuals and societies when everything is located or locatable. Describes net locality as an emerging form of location awareness central to all aspects of digital media, from mobile phones, to Google Maps......, to location-based social networks and games, such as Foursquare and facebook. Warns of the threats these technologies, such as data surveillance, present to our sense of privacy, while also outlining the opportunities for pro-social developments. Provides a theory of the web in the context of the history...... of emerging technologies, from GeoCities to GPS, Wi-Fi, Wiki Me, and Google Android....

  8. Global reinforcement training of CrossNets

    Science.gov (United States)

    Ma, Xiaolong

    2007-10-01

    Hybrid "CMOL" integrated circuits, incorporating advanced CMOS devices for neural cell bodies, nanowires as axons and dendrites, and latching switches as synapses, may be used for the hardware implementation of extremely dense (107 cells and 1012 synapses per cm2) neuromorphic networks, operating up to 10 6 times faster than their biological prototypes. We are exploring several "Cross- Net" architectures that accommodate the limitations imposed by CMOL hardware and should allow effective training of the networks without a direct external access to individual synapses. Our studies have show that CrossNets based on simple (two-terminal) crosspoint devices can work well in at least two modes: as Hop-field networks for associative memory and multilayer perceptrons for classification tasks. For more intelligent tasks (such as robot motion control or complex games), which do not have "examples" for supervised learning, more advanced training methods such as the global reinforcement learning are necessary. For application of global reinforcement training algorithms to CrossNets, we have extended Williams's REINFORCE learning principle to a more general framework and derived several learning rules that are more suitable for CrossNet hardware implementation. The results of numerical experiments have shown that these new learning rules can work well for both classification tasks and reinforcement tasks such as the cartpole balancing control problem. Some limitations imposed by the CMOL hardware need to be carefully addressed for the the successful application of in situ reinforcement training to CrossNets.

  9. Biological Petri Nets

    CERN Document Server

    Wingender, E

    2011-01-01

    It was suggested some years ago that Petri nets might be well suited to modeling metabolic networks, overcoming some of the limitations encountered by the use of systems employing ODEs (ordinary differential equations). Much work has been done since then which confirms this and demonstrates the usefulness of this concept for systems biology. Petri net technology is not only intuitively understood by scientists trained in the life sciences, it also has a robust mathematical foundation and provides the required degree of flexibility. As a result it appears to be a very promising approach to mode

  10. WE-NET Hydrogen Energy Symposium proceedings; WE-NET suiso energy symposium koen yokoshu

    Energy Technology Data Exchange (ETDEWEB)

    NONE

    1999-02-24

    The research and development of WE-NET (World Energy Network) was started in 1993 as a NEDO (New Energy and Industrial Technology Development Organization) project in the New Sunshine Program of Agency of Industrial Science and Technology, Ministry of International Trade and Industry, and aims to contribute to the improvement of global environment and to ease the difficult energy supply/demand situation. The ultimate goal of WE-NET is the construction of a global-scale clean energy network in which hydrogen will be produced from renewable energies such as water and sunshine for distribution to energy consuming locations. Experts are invited to the Symposium from the United States, Germany, and Canada. Information is collected from the participants on hydrogen energy technology development in the three countries, the result of the Phase I program of WE-NET is presented to hydrogen energy scientists in Japan, and views and opinions on the project are collected from them. Accommodated in the above-named publication are 30 essays and three special lectures delivered at the Symposium. (NEDO)

  11. Network switching strategy for energy conservation in heterogeneous networks.

    Directory of Open Access Journals (Sweden)

    Yujae Song

    Full Text Available In heterogeneous networks (HetNets, the large-scale deployment of small base stations (BSs together with traditional macro BSs is an economical and efficient solution that is employed to address the exponential growth in mobile data traffic. In dense HetNets, network switching, i.e., handovers, plays a critical role in connecting a mobile terminal (MT to the best of all accessible networks. In the existing literature, a handover decision is made using various handover metrics such as the signal-to-noise ratio, data rate, and movement speed. However, there are few studies on handovers that focus on energy efficiency in HetNets. In this paper, we propose a handover strategy that helps to minimize energy consumption at BSs in HetNets without compromising the quality of service (QoS of each MT. The proposed handover strategy aims to capture the effect of the stochastic behavior of handover parameters and the expected energy consumption due to handover execution when making a handover decision. To identify the validity of the proposed handover strategy, we formulate a handover problem as a constrained Markov decision process (CMDP, by which the effects of the stochastic behaviors of handover parameters and consequential handover energy consumption can be accurately reflected when making a handover decision. In the CMDP, the aim is to minimize the energy consumption to service an MT over the lifetime of its connection, and the constraint is to guarantee the QoS requirements of the MT given in terms of the transmission delay and call-dropping probability. We find an optimal policy for the CMDP using a combination of the Lagrangian method and value iteration. Simulation results verify the validity of the proposed handover strategy.

  12. Mars MetNet Mission - Martian Atmospheric Observational Post Network

    Science.gov (United States)

    Harri, A.-M.; Haukka, H.; Aleksashkin, S.; Arruego, I.; Schmidt, W.; Genzer, M.; Vazquez, L.; Siikonen, T.; Palin, M.

    2017-09-01

    A new kind of planetary exploration mission for Mars is under development in collaboration between the Finnish Meteorological Institute (FMI), Lavochkin Association (LA), Space Research Institute (IKI) and Institutio Nacional de Tecnica Aerospacial (INTA). The Mars MetNet mission is based on a new semi-hard landing vehicle called MetNet Lander (MNL). The scientific payload of the Mars MetNet Precursor [1] mission is divided into three categories: Atmospheric instruments, Optical devices and Composition and structure devices. Each of the payload instruments will provide significant insights in to the Martian atmospheric behavior. The key technologies of the MetNet Lander have been qualified and the electrical qualification model (EQM) of the payload bay has been built and successfully tested.

  13. Assessing computational genomics skills: Our experience in the H3ABioNet African bioinformatics network.

    Directory of Open Access Journals (Sweden)

    C Victor Jongeneel

    2017-06-01

    Full Text Available The H3ABioNet pan-African bioinformatics network, which is funded to support the Human Heredity and Health in Africa (H3Africa program, has developed node-assessment exercises to gauge the ability of its participating research and service groups to analyze typical genome-wide datasets being generated by H3Africa research groups. We describe a framework for the assessment of computational genomics analysis skills, which includes standard operating procedures, training and test datasets, and a process for administering the exercise. We present the experiences of 3 research groups that have taken the exercise and the impact on their ability to manage complex projects. Finally, we discuss the reasons why many H3ABioNet nodes have declined so far to participate and potential strategies to encourage them to do so.

  14. The ClaudicatioNet concept: design of a national integrated care network providing active and healthy aging for patients with intermittent claudication.

    Science.gov (United States)

    Lauret, Gert-Jan; Gijsbers, Harm J H; Hendriks, Erik J M; Bartelink, Marie-Louise; de Bie, Rob A; Teijink, Joep A W

    2012-01-01

    Intermittent claudication (IC) is a manifestation of peripheral arterial occlusive disease (PAOD). Besides cardiovascular risk management, supervised exercise therapy (SET) should be offered to all patients with IC. Outdated guidelines, an insufficient number of specialized physiotherapists (PTs), lack of awareness of the importance of SET by referring physicians, and misguided financial incentives all seriously impede the availability of a structured SET program in The Netherlands. By initiating regional care networks, ClaudicatioNet aims to improve the quality of care for patients with IC. Based on the chronic care model as a conceptual framework, these networks should enhance the access, continuity, and (cost) efficiency of the health care system. With the aid of a national database, health care professionals will be able to benchmark patient results while ClaudicatioNet will be able to monitor quality of care by way of functional and patient reported outcome measures. The success of ClaudicatioNet is dependent on several factors. Vascular surgeons, general practitioners and coordinating central caregivers will need to team up and work in close collaboration with specialized PTs. A substantial task in the upcoming years will be to monitor the quality, volume, and distribution of ClaudicatioNet PTs. Finally, misguided financial incentives within the Dutch health care system need to be tackled. With ClaudicatioNet, integrated care pathways are likely to improve in the upcoming years. This should result in the achievement of optimal quality of care for all patients with IC.

  15. Fiscal 1996 achievement report. International Clean Energy Network Using Hydrogen Conversion (WE-NET) technology

    Energy Technology Data Exchange (ETDEWEB)

    NONE

    1997-03-01

    Research and development was performed for the WE-NET (World Energy Network) project which aims to carry out hydrogen production, transportation, and supply to consumers, by the use of renewable energy. Under subtask 1, the whole WE-NET project was subjected to evaluation, which included coordination between the respective tasks. Under subtask 2, information exchange and research cooperation were carried out with research institutes overseas. Under subtask 3, a conceptual design was prepared of a total system using ammonia as the medium for hydrogen transportation, accident data were collected and screened, and safety measures and evaluation techniques were developed and improved. Under subtask 4, the hot press method and the electroless plating method were selected as better electrode bonding methods. Under subtask 5, hydrogen liquefaction cycle processes, liquid hydrogen tankers, storage facilities, etc., were studied. Under subtasks 6-9, furthermore, investigations were conducted about low-temperature substance technology, hydrogen energy, hydrogen combustion turbine, etc. (NEDO)

  16. A 3D Active Learning Application for NeMO-Net, the NASA Neural Multi-Modal Observation and Training Network for Global Coral Reef Assessment

    Science.gov (United States)

    van den Bergh, J.; Schutz, J.; Chirayath, V.; Li, A.

    2017-12-01

    NeMO-Net, the NASA neural multi-modal observation and training network for global coral reef assessment, is an open-source deep convolutional neural network and interactive active learning training software aiming to accurately assess the present and past dynamics of coral reef ecosystems through determination of percent living cover and morphology as well as mapping of spatial distribution. We present an interactive video game prototype for tablet and mobile devices where users interactively label morphology classifications over mm-scale 3D coral reef imagery captured using fluid lensing to create a dataset that will be used to train NeMO-Net's convolutional neural network. The application currently allows for users to classify preselected regions of coral in the Pacific and will be expanded to include additional regions captured using our NASA FluidCam instrument, presently the highest-resolution remote sensing benthic imaging technology capable of removing ocean wave distortion, as well as lower-resolution airborne remote sensing data from the ongoing NASA CORAL campaign.Active learning applications present a novel methodology for efficiently training large-scale Neural Networks wherein variances in identification can be rapidly mitigated against control data. NeMO-Net periodically checks users' input against pre-classified coral imagery to gauge their accuracy and utilizes in-game mechanics to provide classification training. Users actively communicate with a server and are requested to classify areas of coral for which other users had conflicting classifications and contribute their input to a larger database for ranking. In partnering with Mission Blue and IUCN, NeMO-Net leverages an international consortium of subject matter experts to classify areas of confusion identified by NeMO-Net and generate additional labels crucial for identifying decision boundary locations in coral reef assessment.

  17. A 3D Active Learning Application for NeMO-Net, the NASA Neural Multi-Modal Observation and Training Network for Global Coral Reef Assessment

    Science.gov (United States)

    van den Bergh, Jarrett; Schutz, Joey; Li, Alan; Chirayath, Ved

    2017-01-01

    NeMO-Net, the NASA neural multi-modal observation and training network for global coral reef assessment, is an open-source deep convolutional neural network and interactive active learning training software aiming to accurately assess the present and past dynamics of coral reef ecosystems through determination of percent living cover and morphology as well as mapping of spatial distribution. We present an interactive video game prototype for tablet and mobile devices where users interactively label morphology classifications over mm-scale 3D coral reef imagery captured using fluid lensing to create a dataset that will be used to train NeMO-Nets convolutional neural network. The application currently allows for users to classify preselected regions of coral in the Pacific and will be expanded to include additional regions captured using our NASA FluidCam instrument, presently the highest-resolution remote sensing benthic imaging technology capable of removing ocean wave distortion, as well as lower-resolution airborne remote sensing data from the ongoing NASA CORAL campaign. Active learning applications present a novel methodology for efficiently training large-scale Neural Networks wherein variances in identification can be rapidly mitigated against control data. NeMO-Net periodically checks users input against pre-classified coral imagery to gauge their accuracy and utilize in-game mechanics to provide classification training. Users actively communicate with a server and are requested to classify areas of coral for which other users had conflicting classifications and contribute their input to a larger database for ranking. In partnering with Mission Blue and IUCN, NeMO-Net leverages an international consortium of subject matter experts to classify areas of confusion identified by NeMO-Net and generate additional labels crucial for identifying decision boundary locations in coral reef assessment.

  18. WE-NET: Japanese hydrogen program

    International Nuclear Information System (INIS)

    Mitsugi, Chiba; Harumi, Arai; Kenzo, Fukuda

    1998-01-01

    The Agency of Industrial Science and Technology (AIST), in the Ministry of International Trade and Industry (MITI), started the New Sunshine Program in 1993 by unifying the Sunshine Program (R and D on new energy technology), the Moonlight Program (R and D on energy conservation technology), and the Research and Development Program for Environmental Technology. The objective of the new program is to develop innovative technologies to allow sustainable growth while solving energy and environmental issues. One of the new projects in this program is the ''International Clean Energy System Technology Utilizing Hydrogen (World Energy Network)'': WE-NET. The goal of WE-NET is to construct a worldwide energy network for effective supply, transportation and utilization of renewable energy using hydrogen. The WE-NET program extends over 28 years from 1993 to 2020. In Phase 1, we started core research in areas such as development of high efficiency technologies including hydrogen production using polymer electrolyte membrane water electrolysis, hydrogen combustion turbines, etc. (author)

  19. Implementation of CLP4NET in Bulgaria

    International Nuclear Information System (INIS)

    Naydenova, I.; Pironkov, L.; Filipov, A.; Petrova, T.; Tsochev, G.; Ganev, I.

    2016-01-01

    Full text: Networking solutions (networks of excellence, communities of practice, knowledge portals, etc.) are recognized as effective tools for nuclear training and education services, transfer of good practices, knowledge and programmes, and knowledge management. In addition, the e-learning is recommended as a state of the art and cost effective approach for supplementing the traditional face to face training and education programmes. Thus, the Cyber Learning Platform for Nuclear Education and Training (CLP4NET) was implemented into the Kozloduy Nuclear Power Plant (KNPP) Training System. Based on the experience of KNPP, the CLP4NET was implemented also at the College of Energy and Electronics (CEE), Technical University of Sofia (TU-Sofia), providing an appropriate tool for further establishment of a National Nuclear Network of Competency. The current study is focused mainly on specific issues and lessons learned during the installation of CLP4NET at the CEE, TU-Sofia. (author

  20. The Net Neutrality Debate: The Basics

    Science.gov (United States)

    Greenfield, Rich

    2006-01-01

    Rich Greenfield examines the basics of today's net neutrality debate that is likely to be an ongoing issue for society. Greenfield states the problems inherent in the definition of "net neutrality" used by Common Cause: "Network neutrality is the principle that Internet users should be able to access any web content they choose and…

  1. The ClaudicatioNet concept: design of a national integrated care network providing active and healthy aging for patients with intermittent claudication

    Directory of Open Access Journals (Sweden)

    Lauret GJ

    2012-08-01

    Full Text Available Gert-Jan Lauret,1,2 Harm JH Gijsbers,3 Erik JM Hendriks,2 Marie-Louise Bartelink,4 Rob A de Bie,2 Joep AW Teijink1,2 On behalf of the ClaudicatioNet Study Group members1Department of Vascular Surgery, Catharina Hospital, Eindhoven, The Netherlands; 2Caphri Research Institute, Department of Epidemiology, Maastricht University, Maastricht, The Netherlands; 3Dutch Society for Heart, Vascular and Lung Physiotherapy, Meijerslaan PG Heemstede, The Netherlands; 4Julius Center Health Sciences and Primary Care, University Medical Center Utrecht, Utrecht, The NetherlandsIntroduction: Intermittent claudication (IC is a manifestation of peripheral arterial occlusive disease (PAOD. Besides cardiovascular risk management, supervised exercise therapy (SET should be offered to all patients with IC. Outdated guidelines, an insufficient number of specialized physiotherapists (PTs, lack of awareness of the importance of SET by referring physicians, and misguided financial incentives all seriously impede the availability of a structured SET program in The Netherlands.Description of care practice: By initiating regional care networks, ClaudicatioNet aims to improve the quality of care for patients with IC. Based on the chronic care model as a conceptual framework, these networks should enhance the access, continuity, and (cost efficiency of the health care system. With the aid of a national database, health care professionals will be able to benchmark patient results while ClaudicatioNet will be able to monitor quality of care by way of functional and patient reported outcome measures.Discussion: The success of ClaudicatioNet is dependent on several factors. Vascular surgeons, general practitioners and coordinating central caregivers will need to team up and work in close collaboration with specialized PTs. A substantial task in the upcoming years will be to monitor the quality, volume, and distribution of ClaudicatioNet PTs. Finally, misguided financial incentives

  2. SpectralNET – an application for spectral graph analysis and visualization

    Directory of Open Access Journals (Sweden)

    Schreiber Stuart L

    2005-10-01

    Full Text Available Abstract Background Graph theory provides a computational framework for modeling a variety of datasets including those emerging from genomics, proteomics, and chemical genetics. Networks of genes, proteins, small molecules, or other objects of study can be represented as graphs of nodes (vertices and interactions (edges that can carry different weights. SpectralNET is a flexible application for analyzing and visualizing these biological and chemical networks. Results Available both as a standalone .NET executable and as an ASP.NET web application, SpectralNET was designed specifically with the analysis of graph-theoretic metrics in mind, a computational task not easily accessible using currently available applications. Users can choose either to upload a network for analysis using a variety of input formats, or to have SpectralNET generate an idealized random network for comparison to a real-world dataset. Whichever graph-generation method is used, SpectralNET displays detailed information about each connected component of the graph, including graphs of degree distribution, clustering coefficient by degree, and average distance by degree. In addition, extensive information about the selected vertex is shown, including degree, clustering coefficient, various distance metrics, and the corresponding components of the adjacency, Laplacian, and normalized Laplacian eigenvectors. SpectralNET also displays several graph visualizations, including a linear dimensionality reduction for uploaded datasets (Principal Components Analysis and a non-linear dimensionality reduction that provides an elegant view of global graph structure (Laplacian eigenvectors. Conclusion SpectralNET provides an easily accessible means of analyzing graph-theoretic metrics for data modeling and dimensionality reduction. SpectralNET is publicly available as both a .NET application and an ASP.NET web application from http://chembank.broad.harvard.edu/resources/. Source code is

  3. Quantum group spin nets: Refinement limit and relation to spin foams

    Science.gov (United States)

    Dittrich, Bianca; Martin-Benito, Mercedes; Steinhaus, Sebastian

    2014-07-01

    So far spin foam models are hardly understood beyond a few of their basic building blocks. To make progress on this question, we define analogue spin foam models, so-called "spin nets," for quantum groups SU(2)k and examine their effective continuum dynamics via tensor network renormalization. In the refinement limit of this coarse-graining procedure, we find a vast nontrivial fixed-point structure beyond the degenerate and the BF phase. In comparison to previous work, we use fixed-point intertwiners, inspired by Reisenberger's construction principle [M. P. Reisenberger, J. Math. Phys. (N.Y.) 40, 2046 (1999)] and the recent work [B. Dittrich and W. Kaminski, arXiv:1311.1798], as the initial parametrization. In this new parametrization fine-tuning is not required in order to flow to these new fixed points. Encouragingly, each fixed point has an associated extended phase, which allows for the study of phase transitions in the future. Finally we also present an interpretation of spin nets in terms of melonic spin foams. The coarse-graining flow of spin nets can thus be interpreted as describing the effective coupling between two spin foam vertices or space time atoms.

  4. Growing a professional network to over 3000 members in less than 4 years: evaluation of InspireNet, British Columbia's virtual nursing health services research network.

    Science.gov (United States)

    Frisch, Noreen; Atherton, Pat; Borycki, Elizabeth; Mickelson, Grace; Cordeiro, Jennifer; Novak Lauscher, Helen; Black, Agnes

    2014-02-21

    Use of Web 2.0 and social media technologies has become a new area of research among health professionals. Much of this work has focused on the use of technologies for health self-management and the ways technologies support communication between care providers and consumers. This paper addresses a new use of technology in providing a platform for health professionals to support professional development, increase knowledge utilization, and promote formal/informal professional communication. Specifically, we report on factors necessary to attract and sustain health professionals' use of a network designed to increase nurses' interest in and use of health services research and to support knowledge utilization activities in British Columbia, Canada. "InspireNet", a virtual professional network for health professionals, is a living laboratory permitting documentation of when and how professionals take up Web 2.0 and social media. Ongoing evaluation documents our experiences in establishing, operating, and evaluating this network. Overall evaluation methods included (1) tracking website use, (2) conducting two member surveys, and (3) soliciting member feedback through focus groups and interviews with those who participated in electronic communities of practice (eCoPs) and other stakeholders. These data have been used to learn about the types of support that seem relevant to network growth. Network growth exceeded all expectations. Members engaged with varying aspects of the network's virtual technologies, such as teams of professionals sharing a common interest, research teams conducting their work, and instructional webinars open to network members. Members used wikis, blogs, and discussion groups to support professional work, as well as a members' database with contact information and areas of interest. The database is accessed approximately 10 times per day. InspireNet public blog posts are accessed roughly 500 times each. At the time of writing, 21 research teams

  5. RadNet Air Data From Fort Smith, AR

    Science.gov (United States)

    This page presents radiation air monitoring and air filter analysis data for Fort Smith, AR from EPA's RadNet system. RadNet is a nationwide network of monitoring stations that measure radiation in air, drinking water and precipitation.

  6. RadNet Air Data From Little Rock, AR

    Science.gov (United States)

    This page presents radiation air monitoring and air filter analysis data for Little Rock, AR from EPA's RadNet system. RadNet is a nationwide network of monitoring stations that measure radiation in air, drinking water and precipitation.

  7. RadNet Air Data From Mason City, IA

    Science.gov (United States)

    This page presents radiation air monitoring and air filter analysis data for Mason City, IA from EPA's RadNet system. RadNet is a nationwide network of monitoring stations that measure radiation in air, drinking water and precipitation.

  8. Network control and optimization : third Euro-NF conference, NET-COOP 2009 Eindhoven, The Netherlands, November 23-25, 2009 : proceedings

    NARCIS (Netherlands)

    Nunez Queija, R.; Resing, J.A.C.

    2010-01-01

    Preface. We are proud to present the proceedings of NET-COOP 2009, the international conference on network control and optimization, co-organized by EURANDOM/ Eindhoven University of Technology and CWI. This year’s conference at EURANDOM, held November 23–25, was the third in line after previous

  9. lpNet: a linear programming approach to reconstruct signal transduction networks.

    Science.gov (United States)

    Matos, Marta R A; Knapp, Bettina; Kaderali, Lars

    2015-10-01

    With the widespread availability of high-throughput experimental technologies it has become possible to study hundreds to thousands of cellular factors simultaneously, such as coding- or non-coding mRNA or protein concentrations. Still, extracting information about the underlying regulatory or signaling interactions from these data remains a difficult challenge. We present a flexible approach towards network inference based on linear programming. Our method reconstructs the interactions of factors from a combination of perturbation/non-perturbation and steady-state/time-series data. We show both on simulated and real data that our methods are able to reconstruct the underlying networks fast and efficiently, thus shedding new light on biological processes and, in particular, into disease's mechanisms of action. We have implemented the approach as an R package available through bioconductor. This R package is freely available under the Gnu Public License (GPL-3) from bioconductor.org (http://bioconductor.org/packages/release/bioc/html/lpNet.html) and is compatible with most operating systems (Windows, Linux, Mac OS) and hardware architectures. bettina.knapp@helmholtz-muenchen.de Supplementary data are available at Bioinformatics online. © The Author 2015. Published by Oxford University Press. All rights reserved. For Permissions, please e-mail: journals.permissions@oup.com.

  10. An overview of the first decade of PollyNET: an emerging network of automated Raman-polarization lidars for continuous aerosol profiling

    Directory of Open Access Journals (Sweden)

    H. Baars

    2016-04-01

    Full Text Available A global vertically resolved aerosol data set covering more than 10 years of observations at more than 20 measurement sites distributed from 63° N to 52° S and 72° W to 124° E has been achieved within the Raman and polarization lidar network PollyNET. This network consists of portable, remote-controlled multiwavelength-polarization-Raman lidars (Polly for automated and continuous 24/7 observations of clouds and aerosols. PollyNET is an independent, voluntary, and scientific network. All Polly lidars feature a standardized instrument design with different capabilities ranging from single wavelength to multiwavelength systems, and now apply unified calibration, quality control, and data analysis. The observations are processed in near-real time without manual intervention, and are presented online at http://polly.tropos.de/. The paper gives an overview of the observations on four continents and two research vessels obtained with eight Polly systems. The specific aerosol types at these locations (mineral dust, smoke, dust-smoke and other dusty mixtures, urban haze, and volcanic ash are identified by their Ångström exponent, lidar ratio, and depolarization ratio. The vertical aerosol distribution at the PollyNET locations is discussed on the basis of more than 55 000 automatically retrieved 30 min particle backscatter coefficient profiles at 532 nm as this operating wavelength is available for all Polly lidar systems. A seasonal analysis of measurements at selected sites revealed typical and extraordinary aerosol conditions as well as seasonal differences. These studies show the potential of PollyNET to support the establishment of a global aerosol climatology that covers the entire troposphere.

  11. The net neutrality debate on Twitter

    Directory of Open Access Journals (Sweden)

    Wolf J. Schünemann

    2015-12-01

    Full Text Available The internet has been seen as a medium that empowers individual political actors in relation to established political elites and media gatekeepers. The present article discusses this “net empowerment hypothesis” and tests it empirically by analysing Twitter communication on the regulation of net neutrality. We extracted 503.839 tweets containing #NetNeutrality posted between January and March 2015 and analysed central developments and the network structure of the debate. The empirical results show that traditional actors from media and politics still maintain a central role.

  12. A Simple Quantum Neural Net with a Periodic Activation Function

    OpenAIRE

    Daskin, Ammar

    2018-01-01

    In this paper, we propose a simple neural net that requires only $O(nlog_2k)$ number of qubits and $O(nk)$ quantum gates: Here, $n$ is the number of input parameters, and $k$ is the number of weights applied to these parameters in the proposed neural net. We describe the network in terms of a quantum circuit, and then draw its equivalent classical neural net which involves $O(k^n)$ nodes in the hidden layer. Then, we show that the network uses a periodic activation function of cosine values o...

  13. 7th Workshop on Complex Networks

    CERN Document Server

    Gonçalves, Bruno; Menezes, Ronaldo; Sinatra, Roberta

    2016-01-01

    The last decades have seen the emergence of Complex Networks as the language with which a wide range of complex phenomena in fields as diverse as Physics, Computer Science, and Medicine (to name just a few) can be properly described and understood. This book provides a view of the state of the art in this dynamic field and covers topics ranging from network controllability, social structure, online behavior, recommendation systems, and network structure. This book includes the peer-reviewed list of works presented at the 7th Workshop on Complex Networks CompleNet 2016 which was hosted by the Université de Bourgogne, France, from March 23-25, 2016. The 28 carefully reviewed and selected contributions in this book address many topics related to complex networks and have been organized in seven major groups: (1) Theory of Complex Networks, (2) Multilayer networks, (3) Controllability of networks, (4) Algorithms for networks, (5) Community detection, (6) Dynamics and spreading phenomena on networks, (7) Applicat...

  14. Net Neutrality: Background and Issues

    National Research Council Canada - National Science Library

    Gilroy, Angele A

    2006-01-01

    .... The move to place restrictions on the owners of the networks that compose and provide access to the Internet, to ensure equal access and nondiscriminatory treatment, is referred to as "net neutrality...

  15. Evaluating the Use of Remote Sensing Data in the U.S. Agency for International Development Famine Early Warning Systems Network

    Science.gov (United States)

    Brown, Molly Elizabeth; Brickley, Elizabeth B

    2012-01-01

    The U.S. Agency for International Development (USAID)'s Famine Early Warning System Network (FEWS NET) provides monitoring and early warning support to decision makers responsible for responding to food insecurity emergencies on three continents. FEWS NET uses satellite remote sensing and ground observations of rainfall and vegetation in order to provide information on drought, floods, and other extreme weather events to decision makers. Previous research has presented results from a professional review questionnaire with FEWS NET expert end-users whose focus was to elicit Earth observation requirements. The review provided FEWS NET operational requirements and assessed the usefulness of additional remote sensing data. We analyzed 1342 food security update reports from FEWS NET. The reports consider the biophysical, socioeconomic, and contextual influences on the food security in 17 countries in Africa from 2000 to 2009. The objective was to evaluate the use of remote sensing information in comparison with other important factors in the evaluation of food security crises. The results show that all 17 countries use rainfall information, agricultural production statistics, food prices, and food access parameters in their analysis of food security problems. The reports display large-scale patterns that are strongly related to history of the FEWS NET program in each country. We found that rainfall data were used 84% of the time, remote sensing of vegetation 28% of the time, and gridded crop models 10% of the time, reflecting the length of use of each product in the regions. More investment is needed in training personnel on remote sensing products to improve use of data products throughout the FEWS NET system.

  16. NetTurnP--neural network prediction of beta-turns by use of evolutionary information and predicted protein sequence features.

    Directory of Open Access Journals (Sweden)

    Bent Petersen

    Full Text Available UNLABELLED: β-turns are the most common type of non-repetitive structures, and constitute on average 25% of the amino acids in proteins. The formation of β-turns plays an important role in protein folding, protein stability and molecular recognition processes. In this work we present the neural network method NetTurnP, for prediction of two-class β-turns and prediction of the individual β-turn types, by use of evolutionary information and predicted protein sequence features. It has been evaluated against a commonly used dataset BT426, and achieves a Matthews correlation coefficient of 0.50, which is the highest reported performance on a two-class prediction of β-turn and not-β-turn. Furthermore NetTurnP shows improved performance on some of the specific β-turn types. In the present work, neural network methods have been trained to predict β-turn or not and individual β-turn types from the primary amino acid sequence. The individual β-turn types I, I', II, II', VIII, VIa1, VIa2, VIba and IV have been predicted based on classifications by PROMOTIF, and the two-class prediction of β-turn or not is a superset comprised of all β-turn types. The performance is evaluated using a golden set of non-homologous sequences known as BT426. Our two-class prediction method achieves a performance of: MCC=0.50, Qtotal=82.1%, sensitivity=75.6%, PPV=68.8% and AUC=0.864. We have compared our performance to eleven other prediction methods that obtain Matthews correlation coefficients in the range of 0.17-0.47. For the type specific β-turn predictions, only type I and II can be predicted with reasonable Matthews correlation coefficients, where we obtain performance values of 0.36 and 0.31, respectively. CONCLUSION: The NetTurnP method has been implemented as a webserver, which is freely available at http://www.cbs.dtu.dk/services/NetTurnP/. NetTurnP is the only available webserver that allows submission of multiple sequences.

  17. NetTurnP--neural network prediction of beta-turns by use of evolutionary information and predicted protein sequence features.

    Science.gov (United States)

    Petersen, Bent; Lundegaard, Claus; Petersen, Thomas Nordahl

    2010-11-30

    β-turns are the most common type of non-repetitive structures, and constitute on average 25% of the amino acids in proteins. The formation of β-turns plays an important role in protein folding, protein stability and molecular recognition processes. In this work we present the neural network method NetTurnP, for prediction of two-class β-turns and prediction of the individual β-turn types, by use of evolutionary information and predicted protein sequence features. It has been evaluated against a commonly used dataset BT426, and achieves a Matthews correlation coefficient of 0.50, which is the highest reported performance on a two-class prediction of β-turn and not-β-turn. Furthermore NetTurnP shows improved performance on some of the specific β-turn types. In the present work, neural network methods have been trained to predict β-turn or not and individual β-turn types from the primary amino acid sequence. The individual β-turn types I, I', II, II', VIII, VIa1, VIa2, VIba and IV have been predicted based on classifications by PROMOTIF, and the two-class prediction of β-turn or not is a superset comprised of all β-turn types. The performance is evaluated using a golden set of non-homologous sequences known as BT426. Our two-class prediction method achieves a performance of: MCC=0.50, Qtotal=82.1%, sensitivity=75.6%, PPV=68.8% and AUC=0.864. We have compared our performance to eleven other prediction methods that obtain Matthews correlation coefficients in the range of 0.17-0.47. For the type specific β-turn predictions, only type I and II can be predicted with reasonable Matthews correlation coefficients, where we obtain performance values of 0.36 and 0.31, respectively. The NetTurnP method has been implemented as a webserver, which is freely available at http://www.cbs.dtu.dk/services/NetTurnP/. NetTurnP is the only available webserver that allows submission of multiple sequences.

  18. NetTurnP – Neural Network Prediction of Beta-turns by Use of Evolutionary Information and Predicted Protein Sequence Features

    DEFF Research Database (Denmark)

    Petersen, Bent; Lundegaard, Claus; Petersen, Thomas Nordahl

    2010-01-01

    is the highest reported performance on a two-class prediction of β-turn and not-β-turn. Furthermore NetTurnP shows improved performance on some of the specific β-turn types. In the present work, neural network methods have been trained to predict β-turn or not and individual β-turn types from the primary amino......β-turns are the most common type of non-repetitive structures, and constitute on average 25% of the amino acids in proteins. The formation of β-turns plays an important role in protein folding, protein stability and molecular recognition processes. In this work we present the neural network method...... NetTurnP, for prediction of two-class β-turns and prediction of the individual β-turn types, by use of evolutionary information and predicted protein sequence features. It has been evaluated against a commonly used dataset BT426, and achieves a Matthews correlation coefficient of 0.50, which...

  19. Photonics-oriented data transmission network for the KM3NeT prototype detector

    International Nuclear Information System (INIS)

    Hoek, M. van der; Mos, S.; Schmelling, J.W.; Hogenbirk, J.; Heine, E.; Jansweijer, P.; Kieft, G.; Peek, H.; Timmer, P.; Wolf, E. de; Zwart, A.

    2013-01-01

    The design of the readout and data acquisition system of the future KM3NeT neutrino telescope employs 10 Gbps photonic technologies for data transmission to shore. The photonic architecture can handle standard transmission protocols. The generic scheme is based on DWDM technology using lasers on shore and optical modulators in each of the 12,800 Digital Optical Modules arranged on several hundred vertical detection units anchored to the seabed. Each module will house 31 photomultipliers together with auxiliary instrumentation and readout electronics. A 100 km electro-optical fibre cable will connect the optical modules to the store. The readout system will guarantee an individual optical connection between each optical module and the shore. A small-scale prototype of a detection unit with four optical modules is in a realization phase and will allow for in situ testing of the data transmission network. We will present results of laboratory tests of the photonics-oriented transmission layer of the network that have been realized for the prototype detection unit

  20. A Lightweight TwiddleNet Portal

    Science.gov (United States)

    2008-03-01

    dimensions of 2.8 x 0.7 x 4.6 inches make for a very good tool for TwiddleNet missions. Its Lithium -ion battery with 1200 mAh energy gives approximately...Wireless Connectivity IrDA, Bluetooth, IEEE 802.11b Battery Lithium ion Approximate Dimensions (in) 2.8 x 0.7 x 4.6 Weight (oz) 6.2 ROM 128 MB...designed to exploit the multiple networking modalities available in the current generation of smartphones . TwiddleNet enables well-organized and well

  1. TasselNet: counting maize tassels in the wild via local counts regression network.

    Science.gov (United States)

    Lu, Hao; Cao, Zhiguo; Xiao, Yang; Zhuang, Bohan; Shen, Chunhua

    2017-01-01

    Accurately counting maize tassels is important for monitoring the growth status of maize plants. This tedious task, however, is still mainly done by manual efforts. In the context of modern plant phenotyping, automating this task is required to meet the need of large-scale analysis of genotype and phenotype. In recent years, computer vision technologies have experienced a significant breakthrough due to the emergence of large-scale datasets and increased computational resources. Naturally image-based approaches have also received much attention in plant-related studies. Yet a fact is that most image-based systems for plant phenotyping are deployed under controlled laboratory environment. When transferring the application scenario to unconstrained in-field conditions, intrinsic and extrinsic variations in the wild pose great challenges for accurate counting of maize tassels, which goes beyond the ability of conventional image processing techniques. This calls for further robust computer vision approaches to address in-field variations. This paper studies the in-field counting problem of maize tassels. To our knowledge, this is the first time that a plant-related counting problem is considered using computer vision technologies under unconstrained field-based environment. With 361 field images collected in four experimental fields across China between 2010 and 2015 and corresponding manually-labelled dotted annotations, a novel Maize Tassels Counting ( MTC ) dataset is created and will be released with this paper. To alleviate the in-field challenges, a deep convolutional neural network-based approach termed TasselNet is proposed. TasselNet can achieve good adaptability to in-field variations via modelling the local visual characteristics of field images and regressing the local counts of maize tassels. Extensive results on the MTC dataset demonstrate that TasselNet outperforms other state-of-the-art approaches by large margins and achieves the overall best counting

  2. TasselNet: counting maize tassels in the wild via local counts regression network

    Directory of Open Access Journals (Sweden)

    Hao Lu

    2017-11-01

    Full Text Available Abstract Background Accurately counting maize tassels is important for monitoring the growth status of maize plants. This tedious task, however, is still mainly done by manual efforts. In the context of modern plant phenotyping, automating this task is required to meet the need of large-scale analysis of genotype and phenotype. In recent years, computer vision technologies have experienced a significant breakthrough due to the emergence of large-scale datasets and increased computational resources. Naturally image-based approaches have also received much attention in plant-related studies. Yet a fact is that most image-based systems for plant phenotyping are deployed under controlled laboratory environment. When transferring the application scenario to unconstrained in-field conditions, intrinsic and extrinsic variations in the wild pose great challenges for accurate counting of maize tassels, which goes beyond the ability of conventional image processing techniques. This calls for further robust computer vision approaches to address in-field variations. Results This paper studies the in-field counting problem of maize tassels. To our knowledge, this is the first time that a plant-related counting problem is considered using computer vision technologies under unconstrained field-based environment. With 361 field images collected in four experimental fields across China between 2010 and 2015 and corresponding manually-labelled dotted annotations, a novel Maize Tassels Counting (MTC dataset is created and will be released with this paper. To alleviate the in-field challenges, a deep convolutional neural network-based approach termed TasselNet is proposed. TasselNet can achieve good adaptability to in-field variations via modelling the local visual characteristics of field images and regressing the local counts of maize tassels. Extensive results on the MTC dataset demonstrate that TasselNet outperforms other state-of-the-art approaches by large

  3. International Network of Chronic Kidney Disease cohort studies (iNET-CKD): a global network of chronic kidney disease cohorts.

    Science.gov (United States)

    Dienemann, Thomas; Fujii, Naohiko; Orlandi, Paula; Nessel, Lisa; Furth, Susan L; Hoy, Wendy E; Matsuo, Seiichi; Mayer, Gert; Methven, Shona; Schaefer, Franz; Schaeffner, Elke S; Solá, Laura; Stengel, Bénédicte; Wanner, Christoph; Zhang, Luxia; Levin, Adeera; Eckardt, Kai-Uwe; Feldman, Harold I

    2016-09-02

    Chronic kidney disease (CKD) is a global health burden, yet it is still underrepresented within public health agendas in many countries. Studies focusing on the natural history of CKD are challenging to design and conduct, because of the long time-course of disease progression, a wide variation in etiologies, and a large amount of clinical variability among individuals with CKD. With the difference in health-related behaviors, healthcare delivery, genetics, and environmental exposures, this variability is greater across countries than within one locale and may not be captured effectively in a single study. Studies were invited to join the network. Prerequisites for membership included: 1) observational designs with a priori hypotheses and defined study objectives, patient-level information, prospective data acquisition and collection of bio-samples, all focused on predialysis CKD patients; 2) target sample sizes of 1,000 patients for adult cohorts and 300 for pediatric cohorts; and 3) minimum follow-up of three years. Participating studies were surveyed regarding design, data, and biosample resources. Twelve prospective cohort studies and two registries covering 21 countries were included. Participants age ranges from >2 to >70 years at inclusion, CKD severity ranges from stage 2 to stage 5. Patient data and biosamples (not available in the registry studies) are measured yearly or biennially. Many studies included multiple ethnicities; cohort size ranges from 400 to more than 13,000 participants. Studies' areas of emphasis all include but are not limited to renal outcomes, such as progression to ESRD and death. iNET-CKD (International Network of CKD cohort studies) was established, to promote collaborative research, foster exchange of expertise, and create opportunities for research training. Participating studies have many commonalities that will facilitate comparative research; however, we also observed substantial differences. The diversity we observed across

  4. NET European Network on Neutron Techniques Standardization for Structural Integrity

    International Nuclear Information System (INIS)

    Youtsos, A.

    2004-01-01

    Improved performance and safety of European energy production systems is essential for providing safe, clean and inexpensive electricity to the citizens of the enlarged EU. The state of the art in assessing internal stresses, micro-structure and defects in welded nuclear components -as well as their evolution due to complex thermo-mechanical loads and irradiation exposure -needs to be improved before relevant structural integrity assessment code requirements can safely become less conservative. This is valid for both experimental characterization techniques and predictive numerical algorithms. In the course of the last two decades neutron methods have proven to be excellent means for providing valuable information required in structural integrity assessment of advanced engineering applications. However, the European industry is hampered from broadly using neutron research due to lack of harmonised and standardized testing methods. 35 European major industrial and research/academic organizations have joined forces, under JRC coordination, to launch the NET European Network on Neutron Techniques Standardization for Structural Integrity in May 2002. The NET collaborative research initiative aims at further development and harmonisation of neutron scattering methods, in support of structural integrity assessment. This is pursued through a number of testing round robin campaigns on neutron diffraction and small angle neutron scattering - SANS and supported by data provided by other more conventional destructive and non-destructive methods, such as X-ray diffraction and deep and surface hole drilling. NET also strives to develop more reliable and harmonized simulation procedures for the prediction of residual stress and damage in steel welded power plant components. This is pursued through a number of computational round robin campaigns based on advanced FEM techniques, and on reliable data obtained by such novel and harmonized experimental methods. The final goal of

  5. Establishment of the National Nuclear Regulatory Portal (NNRP) as the key element of the Global Nuclear Safety and Security Network and Regulatory Network (GNSSN/RegNet) for sharing of nuclear safety information and knowledge among the Global Expert Community

    International Nuclear Information System (INIS)

    Kuvshinnikov, A.V.

    2011-01-01

    The Global Nuclear Safety and Security Network (GNSSN) implements the concept of the Global Nuclear Safety and Security Framework (GNSSF) as outlined in INSAG 21. This is the framework of instruments and resources for achieving and maintaining worldwide a high level of safety and security at nuclear facilities and activities as stated in SF-1 and supporting safety standards or recommendations such as INSAG-12. National efforts are and should be augmented by the activities of a variety of international enterprises that facilitate safety and security. The IAEA standard GS-R-3 requires that information and knowledge is managed as a resource. Further strengthening of GNSSN in particular regulatory networking as intended by GNSSN/RegNet has to be based on current national priorities, on existing regional and thematic networks and on the established mechanisms of international co-operation as presented for example on the websites of the IAEA or the OECD-NEA. Current design and operation of RegNet are flexible enough to accommodate differences in national and international approaches and practices and to facilitate exchange and cooperation on regulatory matters. The main role of GNSSN/RegNet is sharing knowledge and bringing people together to enhance and promote nuclear safety and security. The objectives of GNSSN/RegNet: enhancing safety and security by international cooperation, sharing information and best practices, enabling adequate access to relevant safety and security information and promoting the dissemination of this information, implementing active collaboration in the relevant areas related to safety and security, such as joint projects, peer reviews, enabling synergies among existing networks and initiatives, informing the public on the relevant safety and security areas and the related international collaboration. In the RegNet part of the GNSSN exist the National Nuclear Regulatory Portal (NNRP) which is on one hand a part of the global RegNet and on the

  6. AstroNet-II International Final Conference

    CERN Document Server

    Masdemont, Josep

    2016-01-01

    These are the proceedings of the "AstroNet-II International Final Conference". This conference was one of the last milestones of the Marie-Curie Research Training Network on Astrodynamics "AstroNet-II", that has been funded by the European Commission under the Seventh Framework Programme. The aim of the conference, and thus this book, is to communicate work on astrodynamics problems to an international and specialised audience. The results are presented by both members of the network and invited specialists. The topics include: trajectory design and control, attitude control, structural flexibility of spacecraft and formation flying. The book addresses a readership across the traditional boundaries between mathematics, engineering and industry by offering an interdisciplinary and multisectorial overview of the field.

  7. The Micro-Pulse Lidar Network (MPL-Net)

    Science.gov (United States)

    Welton, Ellsworth J.; Campbell, James R.; Berkoff, Timothy A.; Spinhirne, James D.; Tsay, Si-Chee; Holben, Brent; Shiobara, Masataka; Starr, David OC. (Technical Monitor)

    2002-01-01

    In the early 1990s, the first small, eye-safe, and autonomous lidar system was developed, the Micro-pulse Lidar (MPL). The MPL has proven to be useful in the field because it can be automated, runs continuously (day and night), is eye-safe, can easily be transported and set up, and has a small field-of-view which limits multiple scattering concerns. The MPL acquires signal profiles of backscattered laser light from aerosols and clouds. The signals are analyzed to yield multiple layer heights, optical depths of each layer, average extinction-to-backscatter ratio of each layer, and profiles of extinction in each layer. The MPL has been used in a wide variety of field studies over the past 10 years, leading to nearly 20 papers and many conference presentations. In 2000, a new project using MPL systems was started at NASA Goddard Space Flight Center. The MPL-Net project is currently working to establish a worldwide network of MPL systems, all co-located with NASA's AERONET sunphotometers for joint measurements of optical depth and sky radiance. Automated processing algorithms have been developed to produce data products on a next day basis for all sites and some field experiments. Initial results from the first several sites are shown, along with aerosol data collected during several major field campaigns. Measurements of the aerosol extinction-to-backscatter ratio at several different geographic regions, and for various aerosol types are shown. This information is used to improve the construction of look up tables of the ratio, needed to process aerosol profiles acquired with satellite based lidars.

  8. Semantic Segmentation of Convolutional Neural Network for Supervised Classification of Multispectral Remote Sensing

    Science.gov (United States)

    Xue, L.; Liu, C.; Wu, Y.; Li, H.

    2018-04-01

    Semantic segmentation is a fundamental research in remote sensing image processing. Because of the complex maritime environment, the classification of roads, vegetation, buildings and water from remote Sensing Imagery is a challenging task. Although the neural network has achieved excellent performance in semantic segmentation in the last years, there are a few of works using CNN for ground object segmentation and the results could be further improved. This paper used convolution neural network named U-Net, its structure has a contracting path and an expansive path to get high resolution output. In the network , We added BN layers, which is more conducive to the reverse pass. Moreover, after upsampling convolution , we add dropout layers to prevent overfitting. They are promoted to get more precise segmentation results. To verify this network architecture, we used a Kaggle dataset. Experimental results show that U-Net achieved good performance compared with other architectures, especially in high-resolution remote sensing imagery.

  9. MMPM - Mars MetNet Precursor Mission

    Science.gov (United States)

    Harri, A.-M.; Schmidt, W.; Pichkhadze, K.; Linkin, V.; Vazquez, L.; Uspensky, M.; Polkko, J.; Genzer, M.; Lipatov, A.; Guerrero, H.; Alexashkin, S.; Haukka, H.; Savijarvi, H.; Kauhanen, J.

    2008-09-01

    We are developing a new kind of planetary exploration mission for Mars - MetNet in situ observation network based on a new semi-hard landing vehicle called the Met-Net Lander (MNL). The eventual scope of the MetNet Mission is to deploy some 20 MNLs on the Martian surface using inflatable descent system structures, which will be supported by observations from the orbit around Mars. Currently we are working on the MetNet Mars Precursor Mission (MMPM) to deploy one MetNet Lander to Mars in the 2009/2011 launch window as a technology and science demonstration mission. The MNL will have a versatile science payload focused on the atmospheric science of Mars. Detailed characterization of the Martian atmospheric circulation patterns, boundary layer phenomena, and climatology cycles, require simultaneous in-situ measurements by a network of observation posts on the Martian surface. The scientific payload of the MetNet Mission encompasses separate instrument packages for the atmospheric entry and descent phase and for the surface operation phase. The MetNet mission concept and key probe technologies have been developed and the critical subsystems have been qualified to meet the Martian environmental and functional conditions. Prototyping of the payload instrumentation with final dimensions was carried out in 2003-2006.This huge development effort has been fulfilled in collaboration between the Finnish Meteorological Institute (FMI), the Russian Lavoschkin Association (LA) and the Russian Space Research Institute (IKI) since August 2001. Currently the INTA (Instituto Nacional de Técnica Aeroespacial) from Spain is also participating in the MetNet payload development. To understand the behavior and dynamics of the Martian atmosphere, a wealth of simultaneous in situ observations are needed on varying types of Martian orography, terrain and altitude spanning all latitudes and longitudes. This will be performed by the Mars MetNet Mission. In addition to the science aspects the

  10. Outcomes of polio eradication activities in Uttar Pradesh, India: the Social Mobilization Network (SM Net and Core Group Polio Project (CGPP

    Directory of Open Access Journals (Sweden)

    Singh Vibha

    2011-05-01

    Full Text Available Abstract Background The primary strategy to interrupt transmission of wild poliovirus in India is to improve supplemental immunization activities and routine immunization coverage in priority districts with a focus on 107 high-risk blocks of western Uttar Pradesh and central Bihar. Villages or urban areas with a history of wild poliovirus transmission, or hard-to-reach or resistant populations are categorized as high-risk areas within blocks. The Social Mobilization Network (SM Net was formed in Uttar Pradesh in 2003 to support polio eradication efforts through improved planning, implementation and monitoring of social mobilization activities in those high-risk areas. In this paper, we examine the vaccination outcomes in districts of SM Net where the CORE Group works. Methods We carried out a secondary data analysis of routine monitoring information collected by the SM Net and the Government of India. These data include information about vaccination outcomes in SM Net areas and non-SM Net areas within the districts where the CORE Group operates. Statistical analysis was used to compare, between SM Net and non-SM Net areas, vaccination outcomes considered sensitive to social mobilization efforts of the SM Net. We employed Generalized Estimating Equations (GEE statistical method to account for Intra-cluster Correlation (ICC, and used 'Quasi-likelihood under the independence model criterion (QIC' as the model selection method. Results Vaccination outcomes in SM Net areas were as high as or higher than in non-SM Net areas. There was considerable variation in vaccination outcomes between districts. Conclusions While not conclusive, the results suggest that the social mobilization efforts of the SM Net and the CORE Group are helping to increase vaccination levels in high-risk areas of Uttar Pradesh. Vaccination outcomes in CORE Group areas were equal or higher than in non-CORE, non-SM Net areas. This occurred even though SM Net areas are those with

  11. Few-mode fiber, splice and SDM component characterization by spatially-diverse optical vector network analysis

    DEFF Research Database (Denmark)

    Rommel, Simon; Mendinueta, José Manuel Delgado; Klaus, Werner

    2017-01-01

    This paper discusses spatially diverse optical vector network analysis for space division multiplexing (SDM) component and system characterization, which is becoming essential as SDM is widely considered to increase the capacity of optical communication systems. Characterization of a 108-channel ...... in the few-mode multi-core fiber and their impact on system IL and MDL are analyzed, finding splices to cause significant mode-mixing and to be non-negligible in system capacity analysis.......This paper discusses spatially diverse optical vector network analysis for space division multiplexing (SDM) component and system characterization, which is becoming essential as SDM is widely considered to increase the capacity of optical communication systems. Characterization of a 108-channel...... photonic lantern spatial multiplexer, coupled to a 36-core 3-mode fiber, is experimentally demonstrated, extracting the full impulse response and complex transfer function matrices as well as insertion loss (IL) and mode-dependent loss (MDL) data. Moreover, the mode-mixing behavior of fiber splices...

  12. Science and Development Network (SciDev.net) - Phase IV | IDRC ...

    International Development Research Centre (IDRC) Digital Library (Canada)

    SciDev.net was set up in 2001 as an organization dedicated to providing reliable and authoritative information about science and technology (S&T) for the developing world. SciDev.Net does this primarily through a free-access website, but also by organizing training workshops and other activities in the developing world.

  13. RadNet (Environmental Radiation Ambient Monitoring System)

    Data.gov (United States)

    U.S. Environmental Protection Agency — RadNet, formerly Environmental Radiation Ambient Monitoring System (ERAMS), is a national network of monitoring stations that regularly collect air, precipitation,...

  14. H3ABioNet, a sustainable pan-African bioinformatics network for human heredity and health in Africa

    Science.gov (United States)

    Mulder, Nicola J.; Adebiyi, Ezekiel; Alami, Raouf; Benkahla, Alia; Brandful, James; Doumbia, Seydou; Everett, Dean; Fadlelmola, Faisal M.; Gaboun, Fatima; Gaseitsiwe, Simani; Ghazal, Hassan; Hazelhurst, Scott; Hide, Winston; Ibrahimi, Azeddine; Jaufeerally Fakim, Yasmina; Jongeneel, C. Victor; Joubert, Fourie; Kassim, Samar; Kayondo, Jonathan; Kumuthini, Judit; Lyantagaye, Sylvester; Makani, Julie; Mansour Alzohairy, Ahmed; Masiga, Daniel; Moussa, Ahmed; Nash, Oyekanmi; Ouwe Missi Oukem-Boyer, Odile; Owusu-Dabo, Ellis; Panji, Sumir; Patterton, Hugh; Radouani, Fouzia; Sadki, Khalid; Seghrouchni, Fouad; Tastan Bishop, Özlem; Tiffin, Nicki; Ulenga, Nzovu

    2016-01-01

    The application of genomics technologies to medicine and biomedical research is increasing in popularity, made possible by new high-throughput genotyping and sequencing technologies and improved data analysis capabilities. Some of the greatest genetic diversity among humans, animals, plants, and microbiota occurs in Africa, yet genomic research outputs from the continent are limited. The Human Heredity and Health in Africa (H3Africa) initiative was established to drive the development of genomic research for human health in Africa, and through recognition of the critical role of bioinformatics in this process, spurred the establishment of H3ABioNet, a pan-African bioinformatics network for H3Africa. The limitations in bioinformatics capacity on the continent have been a major contributory factor to the lack of notable outputs in high-throughput biology research. Although pockets of high-quality bioinformatics teams have existed previously, the majority of research institutions lack experienced faculty who can train and supervise bioinformatics students. H3ABioNet aims to address this dire need, specifically in the area of human genetics and genomics, but knock-on effects are ensuring this extends to other areas of bioinformatics. Here, we describe the emergence of genomics research and the development of bioinformatics in Africa through H3ABioNet. PMID:26627985

  15. Type 1 Diabetes TrialNet--an international collaborative clinical trials network.

    Science.gov (United States)

    Skyler, Jay S; Greenbaum, Carla J; Lachin, John M; Leschek, Ellen; Rafkin-Mervis, Lisa; Savage, Peter; Spain, Lisa

    2008-12-01

    Type 1 Diabetes TrialNet is an international consortium of clinical research centers aimed at the prevention or delay of type 1 diabetes (T1D). The fundamental goal of TrialNet is to counter the T1D disease process by immune modulation and/or enhancement of beta cell proliferation and regeneration. To achieve this goal, TrialNet researchers are working to better understand the natural history of the disease, to identify persons at risk, and to clinically evaluate novel therapies that balance potential risks and benefits. The particular focus is on studies of preventive measures. In addition, TrialNet evaluates therapies in individuals with newly diagnosed T1D with preserved beta cell function to help determine the risk/benefit profile and gain an initial assessment of potential efficacy in preservation of beta cell function, so that promising agents can be studied in prevention trials. In addition, TrialNet evaluates methodologies that enhance the conduct of its clinical trials, which includes tests of outcome assessment methodology, the evaluation of surrogate markers, and mechanistic studies laying the foundation for future clinical trials.

  16. Network Effects Versus Strategic Discounting

    DEFF Research Database (Denmark)

    Zucchini, Leon; Claussen, Jörg; Trüg, Moritiz

    . Alternatively, research on strategic discounting suggests small operators use on-net discounts to advertise with low on-net prices. We test the relative strength of these effects using data on tariff setting in German mobile telecommunications between 2001 and 2009. We find that large operators are more likely......Mobile telecommunication operators routinely charge subscribers lower prices for calls on their own network than for calls to other networks (on-net discounts). Studies on tariff-mediated network effects suggest this is due to large operators using on-net discounts to damage smaller rivals...

  17. METHOD OF DISPLAYING AN EXECUTABLE BUSINESS PROCESS MODELS INTO PETRI NETS

    Directory of Open Access Journals (Sweden)

    Igor G. Fedorov

    2013-01-01

    Full Text Available Executable business process models, as well as programs, require evidence of a defect-free finish. The methods based on the formalism of Petri nets are widely used. A business process is a network of dishes, and its properties are set by the analysis of the properties of the network. The aim is to study the methods of displaying an executable business process model in a Petri net. Analysis of the properties of the resulting model allows us to prove a number of important properties: it is a network of free choice and clean without looping.

  18. NetWorking News

    DEFF Research Database (Denmark)

    Fritsch, Jonas; Iversen, Ole Sejer; Dindler, Christian

    For many years cooperative design was primarily concerned with the development of IT supported systems for professional users. However, the cooperative design approach can embrace other social practices such as children’s everyday life. At a methodological level there is no difference in designing...... the Networking News workshop, offers an opportunity to make first hand studies of children’s IT supported social activities in an informal classroom setting....... with adults or children. However there is a need for new methods to support communication and collaboration between designers and children. This article proposes a new method for understandings children’s appropriation of new technology in an interactive workshop setting. The method, which we call...

  19. ExplaNet: A Collaborative Learning Tool and Hybrid Recommender System for Student-Authored Explanations

    Science.gov (United States)

    Masters, Jessica; Madhyastha, Tara; Shakouri, Ali

    2008-01-01

    ExplaNet is a web-based, anonymous, asynchronous explanation-sharing network. Instructors post questions to the network and students submit explanatory answers. Students then view and rank the explanations submitted by their peers before optionally resubmitting a final and revised answer. Three classroom evaluations of ExplaNet showed that by…

  20. A Forward Reachability Algorithm for Bounded Timed-Arc Petri Nets

    DEFF Research Database (Denmark)

    David, Alexandre; Jacobsen, Lasse; Jacobsen, Morten

    2012-01-01

    Timed-arc Petri nets (TAPN) are a well-known time extension of thePetri net model and several translations to networks of timedautomata have been proposed for this model.We present a direct, DBM-basedalgorithm for forward reachability analysis of bounded TAPNs extended with transport arcs...

  1. NetTurnP – Neural Network Prediction of Beta-turns by Use of Evolutionary Information and Predicted Protein Sequence Features

    Science.gov (United States)

    Petersen, Bent; Lundegaard, Claus; Petersen, Thomas Nordahl

    2010-01-01

    β-turns are the most common type of non-repetitive structures, and constitute on average 25% of the amino acids in proteins. The formation of β-turns plays an important role in protein folding, protein stability and molecular recognition processes. In this work we present the neural network method NetTurnP, for prediction of two-class β-turns and prediction of the individual β-turn types, by use of evolutionary information and predicted protein sequence features. It has been evaluated against a commonly used dataset BT426, and achieves a Matthews correlation coefficient of 0.50, which is the highest reported performance on a two-class prediction of β-turn and not-β-turn. Furthermore NetTurnP shows improved performance on some of the specific β-turn types. In the present work, neural network methods have been trained to predict β-turn or not and individual β-turn types from the primary amino acid sequence. The individual β-turn types I, I', II, II', VIII, VIa1, VIa2, VIba and IV have been predicted based on classifications by PROMOTIF, and the two-class prediction of β-turn or not is a superset comprised of all β-turn types. The performance is evaluated using a golden set of non-homologous sequences known as BT426. Our two-class prediction method achieves a performance of: MCC  = 0.50, Qtotal = 82.1%, sensitivity  = 75.6%, PPV  = 68.8% and AUC  = 0.864. We have compared our performance to eleven other prediction methods that obtain Matthews correlation coefficients in the range of 0.17 – 0.47. For the type specific β-turn predictions, only type I and II can be predicted with reasonable Matthews correlation coefficients, where we obtain performance values of 0.36 and 0.31, respectively. Conclusion The NetTurnP method has been implemented as a webserver, which is freely available at http://www.cbs.dtu.dk/services/NetTurnP/. NetTurnP is the only available webserver that allows submission of multiple sequences. PMID:21152409

  2. Segmentation of corneal endothelium images using a U-Net-based convolutional neural network.

    Science.gov (United States)

    Fabijańska, Anna

    2018-04-18

    Diagnostic information regarding the health status of the corneal endothelium may be obtained by analyzing the size and the shape of the endothelial cells in specular microscopy images. Prior to the analysis, the endothelial cells need to be extracted from the image. Up to today, this has been performed manually or semi-automatically. Several approaches to automatic segmentation of endothelial cells exist; however, none of them is perfect. Therefore this paper proposes to perform cell segmentation using a U-Net-based convolutional neural network. Particularly, the network is trained to discriminate pixels located at the borders between cells. The edge probability map outputted by the network is next binarized and skeletonized in order to obtain one-pixel wide edges. The proposed solution was tested on a dataset consisting of 30 corneal endothelial images presenting cells of different sizes, achieving an AUROC level of 0.92. The resulting DICE is on average equal to 0.86, which is a good result, regarding the thickness of the compared edges. The corresponding mean absolute percentage error of cell number is at the level of 4.5% which confirms the high accuracy of the proposed approach. The resulting cell edges are well aligned to the ground truths and require a limited number of manual corrections. This also results in accurate values of the cell morphometric parameters. The corresponding errors range from 5.2% for endothelial cell density, through 6.2% for cell hexagonality to 11.93% for the coefficient of variation of the cell size. Copyright © 2018 Elsevier B.V. All rights reserved.

  3. RadNet-Air Near Real Time Data

    Data.gov (United States)

    U.S. Environmental Protection Agency — RadNet-Air is a national network of air monitoring stations that regularly collect air samples for near real time analysis of radioactivity. The data is transmitted...

  4. UbuntuNet Alliance : Consolidating Research and Education ...

    International Development Research Centre (IDRC) Digital Library (Canada)

    UbuntuNet Alliance : Consolidating Research and Education Networking - Phase II ... North of Sahara, South of Sahara, United States ... social science, population and public health, and health systems research relevant to the emerging crisis.

  5. IP Network Design and Implementation for the Caltech-USGS Element of TriNet

    Science.gov (United States)

    Johnson, M. L.; Busby, R.; Watkins, M.; Schwarz, S.; Hauksson, E.

    2001-12-01

    The new seismic network IP numbering scheme for the Caltech-USGS element of TriNet is designed to provide emergency response plans for computer outages and/or telemetry circuit failures so that data acquisition may continue with minimal interruption. IP numbers from the seismic stations through the Caltech acquisition machines are numbered using private, non-routable IP addresses, which allows the network administrator to create redundancy in the network design, more freedom in choosing IP numbers, and uniformity in the LAN and WAN network addressing. The network scheme used by the Caltech-USGS element of TriNet is designed to create redundancy and load sharing over three or more T1 circuits. A T1 circuit can support 80 dataloggers sending data at a design rate of 19.2 kbps or 120 dataloggers transmitting at a nominal rate of 12.8 kbps. During a circuit detour, the 80 dataloggers on the failed T1 are equally divided between the remaining two circuits. This increases the loads on the remaining two circuits to 120 dataloggers, which is the maximum load each T1 can handle at the nominal rate. Each T1 circuit has a router interface onto a LAN at Caltech with an independent subnet address. Some devices, such as Solaris computers, allow a single interface to be numbered with several IP addresses, a so called "multinetted" interface. This allows the central acquisition computers to appear with distinct addresses that are routable via different T1 circuits, but simplifies the physical cables between devices. We identify these T1 circuits as T1-1, T1-2, and T1-3. At the remote end, each Frame Relay Access Device (FRAD) and connected datalogger(s) is a subnetted LAN. The numbering is arranged so the second octet in the LAN IP address of the FRAD and datalogger identify the datalogger's primary and alternate T1 circuits. For example; a LAN with an IP address of 10.12.0.0/24 has T1-1 as its primary T1, and T1-2 as its alternate circuit. Stations with this number scheme are

  6. Art/Net/Work

    DEFF Research Database (Denmark)

    Andersen, Christian Ulrik; Lindstrøm, Hanne

    2006-01-01

    The seminar Art|Net|Work deals with two important changes in our culture. On one side, the network has become essential in the latest technological development. The Internet has entered a new phase, Web 2.0, including the occurrence of as ‘Wiki’s’, ‘Peer-2-Peer’ distribution, user controlled...... on the ‘network’ itself as a phenomenon and are often using technological networks as a mean of production and distribution. This changes the artistic practice and the distribution channels of art works – and the traditional notions of ‘work’, ‘origin’ and ‘rights’ are increasingly perceived as limiting...... the praxis of the artist. We see different kinds of interventions and activism (including ‘hacktivism’) using the network as a way of questioning the invisible rules that govern public and semi-public spaces. Who ‘owns’ them? What kind of social relationships do they generate? On what principle...

  7. StateGEN/StateNET - A structured method to perform route comparisons

    International Nuclear Information System (INIS)

    Cashwell, J.W.; Erickson, C.M.

    1989-01-01

    StateGEN/StateNET is a modeling structure and routing algorithm designed expressly to address the needs of state and local governments to perform analyses of routing alternatives. StateGEN/StateNET is designed to permit the user to construct a network and assign attributes of interest to the network on a personal computer (PC). The completed network is then transferred via a modem to the TRANSNET system and the preferred route is determined based upon attribute weights assigned by the user. This modeling structure permits the state or local government to perform a routing analysis, such as that required by the US Department of Transportation (DOT) for Highway Route-Controlled Quantity shipments of radioactive materials, with a minimum of resources. StateGEN/StateNET provides a computerized version of the DOT guidelines or allows the user to structure their own network parameters. Sandia National Laboratories (SNL) is the Department of Energy (DOE) lead organization for transportation research and development. The DOE Office of Defense Programs has been the prime sponsor of development of models and associated databases used to analyze the impacts of the transportation of radioactive materials. The routing algorithms used in StateGEN/StateNET were based on the existing models on TRANSNET, a system which was developed to enable outside users to access analytical codes and associated data developed for the DOE

  8. StateGEN/StateNET--A structured method to perform route comparisons

    International Nuclear Information System (INIS)

    Cashwell, J.W.; Erickson, C.M.

    1989-01-01

    StateGEN/StateNET is a modelling structure and routing algorithm designed expressly to address the needs of state and local governments to perform analyses of routing alternatives. StateGEN/StateNET is designed to permit the user to construct a network and assign attributes of interest to the network on a personal computer (PC). The completed network is then transferred via a modem to the TRANSNET system (Cashwell, 1989) and the preferred route is determined based upon attribute weights assigned by the user. This modelling structure permits the state or local to perform a routing analysis, such as that required by the US Department of Transportation (DOT) for Highway Route-Controlled Quantity shipments of radioactive materials, with a minimum of resources. StateGEN/StateNET provides a computerized version of the DOT guidelines (Cashwell, 1989) or allows the user to structure their own network parameters. Sandia national Laboratories (SNL) is the Department of Energy's (DOE) lead organization for transportation research and development. The DOE Office of Defense Programs has been the prime sponsor of development of models and associated databases used to analyze the impacts of the transportation of radioactive materials. The routing algorithms used in StateGEN/StateNET were based on the existing models on TRANSNET, a system which was developed to enable outside users to access analytical codes and associated data developed for the DOE. 2 refs

  9. S-Net for multi-memory multicores

    NARCIS (Netherlands)

    Grelck, C.; Julku, J.; Penczek, F.; Peterson, L.; Pontelli, E.

    2010-01-01

    S-Net is a declarative coordination language and component technology aimed at modern multi-core/many-core architectures and systems-on-chip. It builds on the concept of stream processing to structure dynamically evolving networks of communicating asynchronous components. Components themselves are

  10. StarNet: An application of deep learning in the analysis of stellar spectra

    Science.gov (United States)

    Kielty, Collin; Bialek, Spencer; Fabbro, Sebastien; Venn, Kim; O'Briain, Teaghan; Jahandar, Farbod; Monty, Stephanie

    2018-06-01

    In an era when spectroscopic surveys are capable of collecting spectra for hundreds of thousands of stars, fast and efficient analysis methods are required to maximize scientific impact. These surveys provide a homogeneous database of stellar spectra that are ideal for machine learning applications. In this poster, we present StarNet: a convolutional neural network model applied to the analysis of both SDSS-III APOGEE DR13 and synthetic stellar spectra. When trained on synthetic spectra alone, the calculated stellar parameters (temperature, surface gravity, and metallicity) are of excellent precision and accuracy for both APOGEE data and synthetic data, over a wide range of signal-to-noise ratios. While StarNet was developed using the APOGEE observed spectra and corresponding ASSeT synthetic grid, we suggest that this technique is applicable to other spectral resolutions, spectral surveys, and wavelength regimes. As a demonstration of this, we present a StarNet model trained on lower resolution, R=6000, IR synthetic spectra, describing the spectra delivered by Gemini/NIFS and the forthcoming Gemini/GIRMOS instrument (PI Sivanandam, UToronto). Preliminary results suggest that the stellar parameters determined from this low resolution StarNet model are comparable in precision to the high-resolution APOGEE results. The success of StarNet at lower resolution can be attributed to (1) a large training set of synthetic spectra (N ~200,000) with a priori stellar labels, and (2) the use of the entire spectrum in the solution rather than a few weighted windows, which are common methods in other spectral analysis tools (e.g. FERRE or The Cannon). Remaining challenges in our StarNet applications include rectification, continuum normalization, and wavelength coverage. Solutions to these problems could be used to guide decisions made in the development of future spectrographs, spectroscopic surveys, and data reduction pipelines, such as for the future MSE.

  11. Uncertainty estimation of the velocity model for the TrigNet GPS network

    Science.gov (United States)

    Hackl, Matthias; Malservisi, Rocco; Hugentobler, Urs; Wonnacott, Richard

    2010-05-01

    Satellite based geodetic techniques - above all GPS - provide an outstanding tool to measure crustal motions. They are widely used to derive geodetic velocity models that are applied in geodynamics to determine rotations of tectonic blocks, to localize active geological features, and to estimate rheological properties of the crust and the underlying asthenosphere. However, it is not a trivial task to derive GPS velocities and their uncertainties from positioning time series. In general time series are assumed to be represented by linear models (sometimes offsets, annual, and semi-annual signals are included) and noise. It has been shown that models accounting only for white noise tend to underestimate the uncertainties of rates derived from long time series and that different colored noise components (flicker noise, random walk, etc.) need to be considered. However, a thorough error analysis including power spectra analyses and maximum likelihood estimates is quite demanding and are usually not carried out for every site, but the uncertainties are scaled by latitude dependent factors. Analyses of the South Africa continuous GPS network TrigNet indicate that the scaled uncertainties overestimate the velocity errors. So we applied a method similar to the Allan Variance that is commonly used in the estimation of clock uncertainties and is able to account for time dependent probability density functions (colored noise) to the TrigNet time series. Finally, we compared these estimates to the results obtained by spectral analyses using CATS. Comparisons with synthetic data show that the noise can be represented quite well by a power law model in combination with a seasonal signal in agreement with previous studies.

  12. Markets, voucher subsidies and free nets combine to achieve high bed net coverage in rural Tanzania

    Directory of Open Access Journals (Sweden)

    Gerrets Rene PM

    2008-06-01

    Full Text Available Abstract Background Tanzania has a well-developed network of commercial ITN retailers. In 2004, the government introduced a voucher subsidy for pregnant women and, in mid 2005, helped distribute free nets to under-fives in small number of districts, including Rufiji on the southern coast, during a child health campaign. Contributions of these multiple insecticide-treated net delivery strategies existing at the same time and place to coverage in a poor rural community were assessed. Methods Cross-sectional household survey in 6,331 members of randomly selected 1,752 households of 31 rural villages of Demographic Surveillance System in Rufiji district, Southern Tanzania was conducted in 2006. A questionnaire was administered to every consenting respondent about net use, treatment status and delivery mechanism. Findings Net use was 62.7% overall, 87.2% amongst infants (0 to1 year, 81.8% amongst young children (>1 to 5 years, 54.5% amongst older children (6 to 15 years and 59.6% amongst adults (>15 years. 30.2% of all nets had been treated six months prior to interview. The biggest source of nets used by infants was purchase from the private sector with a voucher subsidy (41.8%. Half of nets used by young children (50.0% and over a third of those used by older children (37.2% were obtained free of charge through the vaccination campaign. The largest source of nets amongst the population overall was commercial purchase (45.1% use and was the primary means for protecting adults (60.2% use. All delivery mechanisms, especially sale of nets at full market price, under-served the poorest but no difference in equity was observed between voucher-subsidized and freely distributed nets. Conclusion All three delivery strategies enabled a poor rural community to achieve net coverage high enough to yield both personal and community level protection for the entire population. Each of them reached their relevant target group and free nets only temporarily

  13. Impact on NOMA on netowrk capacity dimensioning for 5G HetNets

    DEFF Research Database (Denmark)

    Marcano, Andrea; Christiansen, Henrik Lehrmann

    2018-01-01

    Non-orthogonal multiple access (NOMA) has emerged as a key technology for boosting the capacity of 5G networks. Since the latter are expected to be heterogeneous networks (HetNets), the performance of NOMA on 5G HetNets is highly anticipated. In this paper, we present a system-level analysis......, focused on the capacity dimensioning, of a 5G HetNet with hybrid multiple access where NOMA and orthogonal multiple access (OMA) coexist. We use dynamic power allocation and consider four generic pairing methods for NOMA: Hungarian, Gale-Shapley, random and exhaustive. Through our results, we show...... the capacity to cope with the high data demand expected for 5G....

  14. Southern California Seismic Network: Caltech/USGS Element of TriNet 1997-2001

    OpenAIRE

    Hauksson, Egill; Small, Patrick; Hafner, Katrin; Busby, Robert; Clayton, Robert; Goltz, James; Heaton, Tom; Hutton, Kate; Kanamori, Hiroo; Polet, Jascha

    2001-01-01

    The California Institute of Technology (Caltech), the United States Geological Survey (USGS), and the California Department of Conservation, Division of Mines and Geology (CDMG) are completing the implementation of TriNet, a modern seismic information system for southern California. TriNet consists of two elements, the Caltech-USGS element and the CDMG element (Mori et al., 1998). The Caltech-USGS element (Caltech-USGS TriNet) concentrates on rapid notification and archiving...

  15. ENERGY-NET (Energy, Environment and Society Learning Network): Best Practices to Enhance Informal Geoscience Learning

    Science.gov (United States)

    Rossi, R.; Elliott, E. M.; Bain, D.; Crowley, K. J.; Steiner, M. A.; Divers, M. T.; Hopkins, K. G.; Giarratani, L.; Gilmore, M. E.

    2014-12-01

    While energy links all living and non-living systems, the integration of energy, the environment, and society is often not clearly represented in 9 - 12 classrooms and informal learning venues. However, objective public learning that integrates these components is essential for improving public environmental literacy. ENERGY-NET (Energy, Environment and Society Learning Network) is a National Science Foundation funded initiative that uses an Earth Systems Science framework to guide experimental learning for high school students and to improve public learning opportunities regarding the energy-environment-society nexus in a Museum setting. One of the primary objectives of the ENERGY-NET project is to develop a rich set of experimental learning activities that are presented as exhibits at the Carnegie Museum of Natural History in Pittsburgh, Pennsylvania (USA). Here we detail the evolution of the ENERGY-NET exhibit building process and the subsequent evolution of exhibit content over the past three years. While preliminary plans included the development of five "exploration stations" (i.e., traveling activity carts) per calendar year, the opportunity arose to create a single, larger topical exhibit per semester, which was assumed to have a greater impact on museum visitors. Evaluative assessments conducted to date reveal important practices to be incorporated into ongoing exhibit development: 1) Undergraduate mentors and teen exhibit developers should receive additional content training to allow richer exhibit materials. 2) The development process should be distributed over as long a time period as possible and emphasize iteration. This project can serve as a model for other collaborations between geoscience departments and museums. In particular, these practices may streamline development of public presentations and increase the effectiveness of experimental learning activities.

  16. Distributed S-Net: design and implementation

    NARCIS (Netherlands)

    Grelck, C.; Julku, J.; Penczek, F.; Morazan, M.

    2009-01-01

    S-Net is a declarative coordination language and component technology aimed at modern multi-core/many-core architectures and systems-on-chip. It builds on the concept of stream processing to structure networks of communicating asynchronous components, which can be implemented using a conventional

  17. A new neural net approach to robot 3D perception and visuo-motor coordination

    Science.gov (United States)

    Lee, Sukhan

    1992-01-01

    A novel neural network approach to robot hand-eye coordination is presented. The approach provides a true sense of visual error servoing, redundant arm configuration control for collision avoidance, and invariant visuo-motor learning under gazing control. A 3-D perception network is introduced to represent the robot internal 3-D metric space in which visual error servoing and arm configuration control are performed. The arm kinematic network performs the bidirectional association between 3-D space arm configurations and joint angles, and enforces the legitimate arm configurations. The arm kinematic net is structured by a radial-based competitive and cooperative network with hierarchical self-organizing learning. The main goal of the present work is to demonstrate that the neural net representation of the robot 3-D perception net serves as an important intermediate functional block connecting robot eyes and arms.

  18. 3rd International Winter School and Conference on Network Science

    CERN Document Server

    Barzel, Baruch; Puzis, Rami

    2017-01-01

    This book contains original research chapters related to the interdisciplinary field of complex networks spanning biological and environmental networks, social, technological, and economic networks. Many natural phenomena can be modeled as networks where nodes are the primitive compounds and links represent their interactions, similarities, or distances of sorts. Complex networks have an enormous impact on research in various fields like biology, social sciences, engineering, and cyber-security to name a few. The topology of a network often encompasses important information on the functionality and dynamics of the system or the phenomenon it represents. Network science is an emerging interdisciplinary discipline that provides tools and insights to researchers in a variety of domains. NetSci-X is the central winter conference within the field and brings together leading researchers and innovators to connect, meet, and establish interdisciplinary channels for collaboration. It is the largest and best known even...

  19. Few-mode fiber, splice and SDM component characterization by spatially-diverse optical vector network analysis.

    Science.gov (United States)

    Rommel, Simon; Mendinueta, José Manuel Delgado; Klaus, Werner; Sakaguchi, Jun; Olmos, Juan José Vegas; Awaji, Yoshinari; Monroy, Idelfonso Tafur; Wada, Naoya

    2017-09-18

    This paper discusses spatially diverse optical vector network analysis for space division multiplexing (SDM) component and system characterization, which is becoming essential as SDM is widely considered to increase the capacity of optical communication systems. Characterization of a 108-channel photonic lantern spatial multiplexer, coupled to a 36-core 3-mode fiber, is experimentally demonstrated, extracting the full impulse response and complex transfer function matrices as well as insertion loss (IL) and mode-dependent loss (MDL) data. Moreover, the mode-mixing behavior of fiber splices in the few-mode multi-core fiber and their impact on system IL and MDL are analyzed, finding splices to cause significant mode-mixing and to be non-negligible in system capacity analysis.

  20. LTE HetNet Mobility Performance Through Emulation with Commercial Smartphones

    DEFF Research Database (Denmark)

    Jensen, Anders Riis; Pedersen, Klaus I.; Lauridsen, Mads

    2014-01-01

    In this paper we introduce a laboratory emulation setup for evaluation of Long Term Evolution (LTE) mobility performance in a co-channel heterogeneous network (HetNet). The setup consists of two eNodeB emulators, signal faders and release 9 LTE User Equipment (UE). It is shown how the LTE HetNet ...

  1. Net alkalinity and net acidity 1: Theoretical considerations

    International Nuclear Information System (INIS)

    Kirby, Carl S.; Cravotta, Charles A.

    2005-01-01

    Net acidity and net alkalinity are widely used, poorly defined, and commonly misunderstood parameters for the characterization of mine drainage. The authors explain theoretical expressions of 3 types of alkalinity (caustic, phenolphthalein, and total) and acidity (mineral, CO 2 , and total). Except for rarely-invoked negative alkalinity, theoretically defined total alkalinity is closely analogous to measured alkalinity and presents few practical interpretation problems. Theoretically defined 'CO 2 -acidity' is closely related to most standard titration methods with an endpoint pH of 8.3 used for determining acidity in mine drainage, but it is unfortunately named because CO 2 is intentionally driven off during titration of mine-drainage samples. Using the proton condition/mass-action approach and employing graphs to illustrate speciation with changes in pH, the authors explore the concept of principal components and how to assign acidity contributions to aqueous species commonly present in mine drainage. Acidity is defined in mine drainage based on aqueous speciation at the sample pH and on the capacity of these species to undergo hydrolysis to pH 8.3. Application of this definition shows that the computed acidity in mgL -1 as CaCO 3 (based on pH and analytical concentrations of dissolved Fe II , Fe III , Mn, and Al in mgL -1 ):acidity calculated =50{1000(10 -pH )+[2(Fe II )+3(Fe III )]/56+2(Mn) /55+3(Al)/27}underestimates contributions from HSO 4 - and H + , but overestimates the acidity due to Fe 3+ and Al 3+ . However, these errors tend to approximately cancel each other. It is demonstrated that 'net alkalinity' is a valid mathematical construction based on theoretical definitions of alkalinity and acidity. Further, it is shown that, for most mine-drainage solutions, a useful net alkalinity value can be derived from: (1) alkalinity and acidity values based on aqueous speciation (2) measured alkalinity minus calculated acidity, or (3) taking the negative of the

  2. Net alkalinity and net acidity 1: Theoretical considerations

    Science.gov (United States)

    Kirby, C.S.; Cravotta, C.A.

    2005-01-01

    Net acidity and net alkalinity are widely used, poorly defined, and commonly misunderstood parameters for the characterization of mine drainage. The authors explain theoretical expressions of 3 types of alkalinity (caustic, phenolphthalein, and total) and acidity (mineral, CO2, and total). Except for rarely-invoked negative alkalinity, theoretically defined total alkalinity is closely analogous to measured alkalinity and presents few practical interpretation problems. Theoretically defined "CO 2-acidity" is closely related to most standard titration methods with an endpoint pH of 8.3 used for determining acidity in mine drainage, but it is unfortunately named because CO2 is intentionally driven off during titration of mine-drainage samples. Using the proton condition/mass- action approach and employing graphs to illustrate speciation with changes in pH, the authors explore the concept of principal components and how to assign acidity contributions to aqueous species commonly present in mine drainage. Acidity is defined in mine drainage based on aqueous speciation at the sample pH and on the capacity of these species to undergo hydrolysis to pH 8.3. Application of this definition shows that the computed acidity in mg L -1 as CaCO3 (based on pH and analytical concentrations of dissolved FeII, FeIII, Mn, and Al in mg L -1):aciditycalculated=50{1000(10-pH)+[2(FeII)+3(FeIII)]/56+2(Mn)/ 55+3(Al)/27}underestimates contributions from HSO4- and H+, but overestimates the acidity due to Fe3+ and Al3+. However, these errors tend to approximately cancel each other. It is demonstrated that "net alkalinity" is a valid mathematical construction based on theoretical definitions of alkalinity and acidity. Further, it is shown that, for most mine-drainage solutions, a useful net alkalinity value can be derived from: (1) alkalinity and acidity values based on aqueous speciation, (2) measured alkalinity minus calculated acidity, or (3) taking the negative of the value obtained in a

  3. PatterNet: a system to learn compact physical design pattern representations for pattern-based analytics

    Science.gov (United States)

    Lutich, Andrey

    2017-07-01

    This research considers the problem of generating compact vector representations of physical design patterns for analytics purposes in semiconductor patterning domain. PatterNet uses a deep artificial neural network to learn mapping of physical design patterns to a compact Euclidean hyperspace. Distances among mapped patterns in this space correspond to dissimilarities among patterns defined at the time of the network training. Once the mapping network has been trained, PatterNet embeddings can be used as feature vectors with standard machine learning algorithms, and pattern search, comparison, and clustering become trivial problems. PatterNet is inspired by the concepts developed within the framework of generative adversarial networks as well as the FaceNet. Our method facilitates a deep neural network (DNN) to learn directly the compact representation by supplying it with pairs of design patterns and dissimilarity among these patterns defined by a user. In the simplest case, the dissimilarity is represented by an area of the XOR of two patterns. Important to realize that our PatterNet approach is very different to the methods developed for deep learning on image data. In contrast to "conventional" pictures, the patterns in the CAD world are the lists of polygon vertex coordinates. The method solely relies on the promise of deep learning to discover internal structure of the incoming data and learn its hierarchical representations. Artificial intelligence arising from the combination of PatterNet and clustering analysis very precisely follows intuition of patterning/optical proximity correction experts paving the way toward human-like and human-friendly engineering tools.

  4. High-Throughput Network Communication with NetIO

    CERN Document Server

    Schumacher, J\\"orn; The ATLAS collaboration; Vandelli, Wainer

    2016-01-01

    HPC network technologies like Infiniband, TrueScale or OmniPath provide low-latency and high-throughput communication between hosts, which makes them attractive options for data-acquisition systems in large-scale high-energy physics experiments. Like HPC networks, DAQ networks are local and include a well specified number of systems. Unfortunately traditional network communication APIs for HPC clusters like MPI or PGAS target exclusively the HPC community and are not suited well for DAQ applications. It is possible to build distributed DAQ applications using low-level system APIs like Infiniband Verbs (and this has been done), but it requires a non negligible effort and expert knowledge. On the other hand, message services like 0MQ have gained popularity in the HEP community. Such APIs allow to build distributed applications with a high-level approach and provide good performance. Unfortunately their usage usually limits developers to TCP/IP-based networks. While it is possible to operate a TCP/IP stack on to...

  5. OK-Net Arable online knowledge platform

    DEFF Research Database (Denmark)

    Rasmussen, Ilse Ankjær; Jensen, Allan Leck; Jørgensen, Margit Styrbæk

    2017-01-01

    The complexity of organic farming requires farmers to have a very high level of knowledge and skills, but exchange on organic farming techniques remains limited. In order to increase productivity and quality in organic arable cropping in Europe, the thematic network OK-Net Arable under Horizon 20...

  6. Networks of Cells and Petri Nets

    OpenAIRE

    Bernardini, Francesco; Gheorgue, Marian; Margenstern, Maurice; Verlan, Sergey

    2007-01-01

    We introduce a new class of P systems, called networks of cells, with rules allowing several cells to simultaneously interact with each other in order to produce some new objects inside some other output cells. We define different types of behavior for networks of cells by considering alternative strategies for the application of the rules: sequential application, free parallelism, maximal parallelism, locally-maximal parallelism and minimal parallelism. We devise a way for tra...

  7. Self-Awareness in Computer Networks

    Directory of Open Access Journals (Sweden)

    Ariane Keller

    2014-01-01

    Full Text Available The Internet architecture works well for a wide variety of communication scenarios. However, its flexibility is limited because it was initially designed to provide communication links between a few static nodes in a homogeneous network and did not attempt to solve the challenges of today’s dynamic network environments. Although the Internet has evolved to a global system of interconnected computer networks, which links together billions of heterogeneous compute nodes, its static architecture remained more or less the same. Nowadays the diversity in networked devices, communication requirements, and network conditions vary heavily, which makes it difficult for a static set of protocols to provide the required functionality. Therefore, we propose a self-aware network architecture in which protocol stacks can be built dynamically. Those protocol stacks can be optimized continuously during communication according to the current requirements. For this network architecture we propose an FPGA-based execution environment called EmbedNet that allows for a dynamic mapping of network protocols to either hardware or software. We show that our architecture can reduce the communication overhead significantly by adapting the protocol stack and that the dynamic hardware/software mapping of protocols considerably reduces the CPU load introduced by packet processing.

  8. Modeling the Metabolism of Arabidopsis thaliana: Application of Network Decomposition and Network Reduction in the Context of Petri Nets

    Directory of Open Access Journals (Sweden)

    Ina Koch

    2017-06-01

    Full Text Available Motivation:Arabidopsis thaliana is a well-established model system for the analysis of the basic physiological and metabolic pathways of plants. Nevertheless, the system is not yet fully understood, although many mechanisms are described, and information for many processes exists. However, the combination and interpretation of the large amount of biological data remain a big challenge, not only because data sets for metabolic paths are still incomplete. Moreover, they are often inconsistent, because they are coming from different experiments of various scales, regarding, for example, accuracy and/or significance. Here, theoretical modeling is powerful to formulate hypotheses for pathways and the dynamics of the metabolism, even if the biological data are incomplete. To develop reliable mathematical models they have to be proven for consistency. This is still a challenging task because many verification techniques fail already for middle-sized models. Consequently, new methods, like decomposition methods or reduction approaches, are developed to circumvent this problem.Methods: We present a new semi-quantitative mathematical model of the metabolism of Arabidopsis thaliana. We used the Petri net formalism to express the complex reaction system in a mathematically unique manner. To verify the model for correctness and consistency we applied concepts of network decomposition and network reduction such as transition invariants, common transition pairs, and invariant transition pairs.Results: We formulated the core metabolism of Arabidopsis thaliana based on recent knowledge from literature, including the Calvin cycle, glycolysis and citric acid cycle, glyoxylate cycle, urea cycle, sucrose synthesis, and the starch metabolism. By applying network decomposition and reduction techniques at steady-state conditions, we suggest a straightforward mathematical modeling process. We demonstrate that potential steady-state pathways exist, which provide the

  9. Tariff-Mediated Network Effects Versus Strategic Disounting

    DEFF Research Database (Denmark)

    Zucchini, Leon; Claussen, Jörg; Trüg, Moritz

    2013-01-01

    . Alternatively, research on strategic discounting suggests that small operators use on-net discounts to advertise with low on-net prices. We test the relative strength of these effects using data on tariff setting in German mobile telecommunications between 2001 and 2009. We find that large operators are more......Mobile telecommunication operators routinely charge subscribers lower prices for calls on their own network than for calls to other networks (on-net discounts). Studies on tariff-mediated network effects suggest this is due to large operators using on-net discounts to damage smaller rivals...

  10. Effect of river discharge and geometry on tides and net water transport in an estuarine network, an idealized model applied to the Yangtze Estuary

    NARCIS (Netherlands)

    Alebregtse, N. C.|info:eu-repo/dai/nl/345704304; de Swart, H. E.|info:eu-repo/dai/nl/073449725

    2016-01-01

    Tidal propagation in, and division of net water transport over different channels in an estuarine network are analyzed using a newly developed idealized model. The water motion in this model is governed by the cross-sectionally averaged shallow water equations and is forced by tides at the seaward

  11. The Strategic Partners Network's Extraction: The XStrat.Net Project

    Science.gov (United States)

    Taifi, Nouha; Passiante, Giuseppina

    The firms in the business environment have to choose adequate partners in order to sustain their competitive advantage and their economic performance. Plus, the creation of special communities consisting of these partners is essential for the life-long development of these latter and the firms creating them. The research project XStrat.Net aims at the identification of factors and indicators about the organizations for the modelling of intelligent agents -XStrat intelligent agents- and the engineering of a software -XStrat- to process these backbones intelligent agents. Through the use of the software, the firms will be able to select the needed partners for the creation of special communities for the purpose of learning, interest or innovation. The XStrat.Net project also intends to provide guidelines for the creation of the special communities.

  12. URBAN-NET: A Network-based Infrastructure Monitoring and Analysis System for Emergency Management and Public Safety

    Energy Technology Data Exchange (ETDEWEB)

    Lee, Sangkeun (Matt) [ORNL; Chen, Liangzhe [ORNL; Duan, Sisi [ORNL; Chinthavali, Supriya [ORNL; Shankar, Mallikarjun (Arjun) [ORNL; Prakash, B. Aditya [Virginia Tech, Blacksburg, VA

    2016-01-01

    Abstract Critical Infrastructures (CIs) such as energy, water, and transportation are complex networks that are crucial for sustaining day-to-day commodity flows vital to national security, economic stability, and public safety. The nature of these CIs is such that failures caused by an extreme weather event or a man-made incident can trigger widespread cascading failures, sending ripple effects at regional or even national scales. To minimize such effects, it is critical for emergency responders to identify existing or potential vulnerabilities within CIs during such stressor events in a systematic and quantifiable manner and take appropriate mitigating actions. We present here a novel critical infrastructure monitoring and analysis system named URBAN-NET. The system includes a software stack and tools for monitoring CIs, pre-processing data, interconnecting multiple CI datasets as a heterogeneous network, identifying vulnerabilities through graph-based topological analysis, and predicting consequences based on what-if simulations along with visualization. As a proof-of-concept, we present several case studies to show the capabilities of our system. We also discuss remaining challenges and future work.

  13. iNET Preamble Detector Performance in the Presence of Multipath Interference

    Science.gov (United States)

    2014-06-24

    detection performance for a reduced complexity. 15. SUBJECT TERMS Preamble-Assisted Equalization for Aeronautical Telemtry ( PAQ ), Spectrum...Instrumentation (PEO STRI) under contract W900KK-13-C-0026 ( PAQ ). REFERENCES [1] integrated Network Enhanced Telemetry (iNET) Radio Access Network Standards

  14. [Integration of sex/gender into environmental health research. Results of the interdisciplinary research network Sex/Gender-Environment-Health (GeUmGe-NET)].

    Science.gov (United States)

    Bolte, Gabriele; David, Madlen; Dębiak, Małgorzata; Fiedel, Lotta; Hornberg, Claudia; Kolossa-Gehring, Marike; Kraus, Ute; Lätzsch, Rebecca; Paeck, Tatjana; Palm, Kerstin; Schneider, Alexandra

    2018-06-01

    The comprehensive consideration of sex/gender in health research is essential to increase relevance and validity of research results. Contrary to other areas of health research, there is no systematic summary of the current state of research on the significance of sex/gender in environmental health. Within the interdisciplinary research network Sex/Gender-Environment-Health (GeUmGe-NET) the current state of integration of sex/gender aspects or, respectively, gender theoretical concepts into research was systematically assessed within selected topics of the research areas environmental toxicology, environmental medicine, environmental epidemiology and public health research on environment and health. Knowledge gaps and research needs were identified in all research areas. Furthermore, the potential for methodological advancements by using gender theoretical concepts was depicted. A dialogue between biomedical research, public health research, and gender studies was started with the research network GeUmGe-NET. This dialogue has to be continued particularly regarding a common testing of methodological innovations in data collection and data analysis. Insights of this interdisciplinary research are relevant for practice areas such as environmental health protection, health promotion, environmental justice, and environmental health monitoring.

  15. Towards a network operating system

    OpenAIRE

    López Álvarez, Victor; Gonzalez de Dios, Oscar; Fuentes, Beatriz; Yannuzzi, Marcelo; Fernández Palacios, Juan Pedro; Lopez, Diego

    2014-01-01

    A Network Operating System (NetOS) is a novel paradigm for developing a next-generation network management and operation platform. As we shall describe, NetOS not only goes far beyond the SDN concepts but also constitutes a fundamental enabler for NFV. © 2014 OSA.

  16. Framing U-Net via Deep Convolutional Framelets: Application to Sparse-View CT.

    Science.gov (United States)

    Han, Yoseob; Ye, Jong Chul

    2018-06-01

    X-ray computed tomography (CT) using sparse projection views is a recent approach to reduce the radiation dose. However, due to the insufficient projection views, an analytic reconstruction approach using the filtered back projection (FBP) produces severe streaking artifacts. Recently, deep learning approaches using large receptive field neural networks such as U-Net have demonstrated impressive performance for sparse-view CT reconstruction. However, theoretical justification is still lacking. Inspired by the recent theory of deep convolutional framelets, the main goal of this paper is, therefore, to reveal the limitation of U-Net and propose new multi-resolution deep learning schemes. In particular, we show that the alternative U-Net variants such as dual frame and tight frame U-Nets satisfy the so-called frame condition which makes them better for effective recovery of high frequency edges in sparse-view CT. Using extensive experiments with real patient data set, we demonstrate that the new network architectures provide better reconstruction performance.

  17. Dissecting engineered cell types and enhancing cell fate conversion via CellNet

    Science.gov (United States)

    Morris, Samantha A.; Cahan, Patrick; Li, Hu; Zhao, Anna M.; San Roman, Adrianna K.; Shivdasani, Ramesh A.; Collins, James J.; Daley, George Q.

    2014-01-01

    SUMMARY Engineering clinically relevant cells in vitro holds promise for regenerative medicine, but most protocols fail to faithfully recapitulate target cell properties. To address this, we developed CellNet, a network biology platform that determines whether engineered cells are equivalent to their target tissues, diagnoses aberrant gene regulatory networks, and prioritizes candidate transcriptional regulators to enhance engineered conversions. Using CellNet, we improved B cell to macrophage conversion, transcriptionally and functionally, by knocking down predicted B cell regulators. Analyzing conversion of fibroblasts to induced hepatocytes (iHeps), CellNet revealed an unexpected intestinal program regulated by the master regulator Cdx2. We observed long-term functional engraftment of mouse colon by iHeps, thereby establishing their broader potential as endoderm progenitors and demonstrating direct conversion of fibroblasts into intestinal epithelium. Our studies illustrate how CellNet can be employed to improve direct conversion and to uncover unappreciated properties of engineered cells. PMID:25126792

  18. A Science Cloud: OneSpaceNet

    Science.gov (United States)

    Morikawa, Y.; Murata, K. T.; Watari, S.; Kato, H.; Yamamoto, K.; Inoue, S.; Tsubouchi, K.; Fukazawa, K.; Kimura, E.; Tatebe, O.; Shimojo, S.

    2010-12-01

    Main methodologies of Solar-Terrestrial Physics (STP) so far are theoretical, experimental and observational, and computer simulation approaches. Recently "informatics" is expected as a new (fourth) approach to the STP studies. Informatics is a methodology to analyze large-scale data (observation data and computer simulation data) to obtain new findings using a variety of data processing techniques. At NICT (National Institute of Information and Communications Technology, Japan) we are now developing a new research environment named "OneSpaceNet". The OneSpaceNet is a cloud-computing environment specialized for science works, which connects many researchers with high-speed network (JGN: Japan Gigabit Network). The JGN is a wide-area back-born network operated by NICT; it provides 10G network and many access points (AP) over Japan. The OneSpaceNet also provides with rich computer resources for research studies, such as super-computers, large-scale data storage area, licensed applications, visualization devices (like tiled display wall: TDW), database/DBMS, cluster computers (4-8 nodes) for data processing and communication devices. What is amazing in use of the science cloud is that a user simply prepares a terminal (low-cost PC). Once connecting the PC to JGN2plus, the user can make full use of the rich resources of the science cloud. Using communication devices, such as video-conference system, streaming and reflector servers, and media-players, the users on the OneSpaceNet can make research communications as if they belong to a same (one) laboratory: they are members of a virtual laboratory. The specification of the computer resources on the OneSpaceNet is as follows: The size of data storage we have developed so far is almost 1PB. The number of the data files managed on the cloud storage is getting larger and now more than 40,000,000. What is notable is that the disks forming the large-scale storage are distributed to 5 data centers over Japan (but the storage

  19. Career Guidance in India Based on O*NET and Cultural Variables

    Science.gov (United States)

    Bhatnagar, Mohit

    2018-01-01

    The Occupational Information Network (O*NET) is the primary source of occupational information in the United States (US). In this study, I review O*NET's usage for career guidance in India and conceive a career intervention based on it. In an empirical evaluation adopting a posttest-only experimental design with post-graduate management students…

  20. NetWeaver for EMDS user guide (version 1.1): a knowledge base development system.

    Science.gov (United States)

    Keith M. Reynolds

    1999-01-01

    The guide describes use of the NetWeaver knowledge base development system. Knowledge representation in NetWeaver is based on object-oriented fuzzy-logic networks that offer several significant advantages over the more traditional rulebased representation. Compared to rule-based knowledge bases, NetWeaver knowledge bases are easier to build, test, and maintain because...

  1. ParkinsonNet: A Low-Cost Health Care Innovation With A Systems Approach From The Netherlands.

    Science.gov (United States)

    Bloem, Bas R; Rompen, Lonneke; Vries, Nienke M de; Klink, Ab; Munneke, Marten; Jeurissen, Patrick

    2017-11-01

    ParkinsonNet, a low-cost innovation to optimize care for patients with Parkinson disease, was developed in 2004 as a network of physical therapists in several regions in the Netherlands. Since that time, the network has achieved full national reach, with 70 regional networks and around 3,000 specifically trained professionals from 12 disciplines. Key elements include the empowerment of professionals who are highly trained and specialized in Parkinson disease, the empowerment of patients by education and consultation, and the empowerment of integrated multidisciplinary teams to better address and manage the disease. Studies have found that the ParkinsonNet approach leads to outcomes that are at least as good as, if not better than, outcomes from usual care. One study found a 50 percent reduction in hip fractures and fewer inpatient admissions. Other studies suggest that ParkinsonNet leads to modest but important cost savings (at least US$439 per patient annually). These cost savings outweigh the costs of building and maintaining the network. Because of ParkinsonNet's success, the program has now spread to several other countries and serves as a model of a successful and scalable frugal innovation.

  2. A Novel Petri Nets-Based Modeling Method for the Interaction between the Sensor and the Geographic Environment in Emerging Sensor Networks

    Science.gov (United States)

    Zhang, Feng; Xu, Yuetong; Chou, Jarong

    2016-01-01

    The service of sensor device in Emerging Sensor Networks (ESNs) is the extension of traditional Web services. Through the sensor network, the service of sensor device can communicate directly with the entity in the geographic environment, and even impact the geographic entity directly. The interaction between the sensor device in ESNs and geographic environment is very complex, and the interaction modeling is a challenging problem. This paper proposed a novel Petri Nets-based modeling method for the interaction between the sensor device and the geographic environment. The feature of the sensor device service in ESNs is more easily affected by the geographic environment than the traditional Web service. Therefore, the response time, the fault-tolerant ability and the resource consumption become important factors in the performance of the whole sensor application system. Thus, this paper classified IoT services as Sensing services and Controlling services according to the interaction between IoT service and geographic entity, and classified GIS services as data services and processing services. Then, this paper designed and analyzed service algebra and Colored Petri Nets model to modeling the geo-feature, IoT service, GIS service and the interaction process between the sensor and the geographic enviroment. At last, the modeling process is discussed by examples. PMID:27681730

  3. A Novel Petri Nets-Based Modeling Method for the Interaction between the Sensor and the Geographic Environment in Emerging Sensor Networks

    Directory of Open Access Journals (Sweden)

    Feng Zhang

    2016-09-01

    Full Text Available The service of sensor device in Emerging Sensor Networks (ESNs is the extension of traditional Web services. Through the sensor network, the service of sensor device can communicate directly with the entity in the geographic environment, and even impact the geographic entity directly. The interaction between the sensor device in ESNs and geographic environment is very complex, and the interaction modeling is a challenging problem. This paper proposed a novel Petri Nets-based modeling method for the interaction between the sensor device and the geographic environment. The feature of the sensor device service in ESNs is more easily affected by the geographic environment than the traditional Web service. Therefore, the response time, the fault-tolerant ability and the resource consumption become important factors in the performance of the whole sensor application system. Thus, this paper classified IoT services as Sensing services and Controlling services according to the interaction between IoT service and geographic entity, and classified GIS services as data services and processing services. Then, this paper designed and analyzed service algebra and Colored Petri Nets model to modeling the geo-feature, IoT service, GIS service and the interaction process between the sensor and the geographic enviroment. At last, the modeling process is discussed by examples.

  4. An adaptable Boolean net trainable to control a computing robot

    International Nuclear Information System (INIS)

    Lauria, F. E.; Prevete, R.; Milo, M.; Visco, S.

    1999-01-01

    We discuss a method to implement in a Boolean neural network a Hebbian rule so to obtain an adaptable universal control system. We start by presenting both the Boolean neural net and the Hebbian rule we have considered. Then we discuss, first, the problems arising when the latter is naively implemented in a Boolean neural net, second, the method consenting us to overcome them and the ensuing adaptable Boolean neural net paradigm. Next, we present the adaptable Boolean neural net as an intelligent control system, actually controlling a writing robot, and discuss how to train it in the execution of the elementary arithmetic operations on operands represented by numerals with an arbitrary number of digits

  5. Networks of myelin covariance

    Science.gov (United States)

    Slater, David; Ruef, Anne; Sanabria‐Diaz, Gretel; Preisig, Martin; Kherif, Ferath; Draganski, Bogdan; Lutti, Antoine

    2017-01-01

    Abstract Networks of anatomical covariance have been widely used to study connectivity patterns in both normal and pathological brains based on the concurrent changes of morphometric measures (i.e., cortical thickness) between brain structures across subjects (Evans, 2013). However, the existence of networks of microstructural changes within brain tissue has been largely unexplored so far. In this article, we studied in vivo the concurrent myelination processes among brain anatomical structures that gathered together emerge to form nonrandom networks. We name these “networks of myelin covariance” (Myelin‐Nets). The Myelin‐Nets were built from quantitative Magnetization Transfer data—an in‐vivo magnetic resonance imaging (MRI) marker of myelin content. The synchronicity of the variations in myelin content between anatomical regions was measured by computing the Pearson's correlation coefficient. We were especially interested in elucidating the effect of age on the topological organization of the Myelin‐Nets. We therefore selected two age groups: Young‐Age (20–31 years old) and Old‐Age (60–71 years old) and a pool of participants from 48 to 87 years old for a Myelin‐Nets aging trajectory study. We found that the topological organization of the Myelin‐Nets is strongly shaped by aging processes. The global myelin correlation strength, between homologous regions and locally in different brain lobes, showed a significant dependence on age. Interestingly, we also showed that the aging process modulates the resilience of the Myelin‐Nets to damage of principal network structures. In summary, this work sheds light on the organizational principles driving myelination and myelin degeneration in brain gray matter and how such patterns are modulated by aging. PMID:29271053

  6. Networks of myelin covariance.

    Science.gov (United States)

    Melie-Garcia, Lester; Slater, David; Ruef, Anne; Sanabria-Diaz, Gretel; Preisig, Martin; Kherif, Ferath; Draganski, Bogdan; Lutti, Antoine

    2018-04-01

    Networks of anatomical covariance have been widely used to study connectivity patterns in both normal and pathological brains based on the concurrent changes of morphometric measures (i.e., cortical thickness) between brain structures across subjects (Evans, ). However, the existence of networks of microstructural changes within brain tissue has been largely unexplored so far. In this article, we studied in vivo the concurrent myelination processes among brain anatomical structures that gathered together emerge to form nonrandom networks. We name these "networks of myelin covariance" (Myelin-Nets). The Myelin-Nets were built from quantitative Magnetization Transfer data-an in-vivo magnetic resonance imaging (MRI) marker of myelin content. The synchronicity of the variations in myelin content between anatomical regions was measured by computing the Pearson's correlation coefficient. We were especially interested in elucidating the effect of age on the topological organization of the Myelin-Nets. We therefore selected two age groups: Young-Age (20-31 years old) and Old-Age (60-71 years old) and a pool of participants from 48 to 87 years old for a Myelin-Nets aging trajectory study. We found that the topological organization of the Myelin-Nets is strongly shaped by aging processes. The global myelin correlation strength, between homologous regions and locally in different brain lobes, showed a significant dependence on age. Interestingly, we also showed that the aging process modulates the resilience of the Myelin-Nets to damage of principal network structures. In summary, this work sheds light on the organizational principles driving myelination and myelin degeneration in brain gray matter and how such patterns are modulated by aging. © 2017 The Authors Human Brain Mapping Published by Wiley Periodicals, Inc.

  7. Statistical adjustment of culture-independent diagnostic tests for trend analysis in the Foodborne Diseases Active Surveillance Network (FoodNet), USA.

    Science.gov (United States)

    Gu, Weidong; Dutta, Vikrant; Patrick, Mary; Bruce, Beau B; Geissler, Aimee; Huang, Jennifer; Fitzgerald, Collette; Henao, Olga

    2018-03-19

    Culture-independent diagnostic tests (CIDTs) are increasingly used to diagnose Campylobacter infection in the Foodborne Diseases Active Surveillance Network (FoodNet). Because CIDTs have different performance characteristics compared with culture, which has been used historically and is still used to diagnose campylobacteriosis, adjustment of cases diagnosed by CIDT is needed to compare with culture-confirmed cases for monitoring incidence trends. We identified the necessary parameters for CIDT adjustment using culture as the gold standard, and derived formulas to calculate positive predictive values (PPVs). We conducted a literature review and meta-analysis to examine the variability in CIDT performance and Campylobacter prevalence applicable to FoodNet sites. We then developed a Monte Carlo method to estimate test-type and site-specific PPVs with their associated uncertainties. The uncertainty in our estimated PPVs was largely derived from uncertainty about the specificity of CIDTs and low prevalence of Campylobacter in tested samples. Stable CIDT-adjusted incidences of Campylobacter cases from 2012 to 2015 were observed compared with a decline in culture-confirmed incidence. We highlight the lack of data on the total numbers of tested samples as one of main limitations for CIDT adjustment. Our results demonstrate the importance of adjusting CIDTs for understanding trends in Campylobacter incidence in FoodNet.

  8. Local Area Network: Community Involvement, Social Capital, and Glocalization at NetU

    Science.gov (United States)

    Trevett-Smith, Matthew D.

    2010-01-01

    Ethnographic and interview data from a long-term study of "NetU," a wired community and college, are used to investigate the effects of computer-mediated communication on social relationships. During the course of this research "LAN" residents of NetU are compared with a similar group of non-LAN residents who lived in the same neighborhood, but…

  9. Stability indicators in network reconstruction.

    Directory of Open Access Journals (Sweden)

    Michele Filosi

    Full Text Available The number of available algorithms to infer a biological network from a dataset of high-throughput measurements is overwhelming and keeps growing. However, evaluating their performance is unfeasible unless a 'gold standard' is available to measure how close the reconstructed network is to the ground truth. One measure of this is the stability of these predictions to data resampling approaches. We introduce NetSI, a family of Network Stability Indicators, to assess quantitatively the stability of a reconstructed network in terms of inference variability due to data subsampling. In order to evaluate network stability, the main NetSI methods use a global/local network metric in combination with a resampling (bootstrap or cross-validation procedure. In addition, we provide two normalized variability scores over data resampling to measure edge weight stability and node degree stability, and then introduce a stability ranking for edges and nodes. A complete implementation of the NetSI indicators, including the Hamming-Ipsen-Mikhailov (HIM network distance adopted in this paper is available with the R package nettools. We demonstrate the use of the NetSI family by measuring network stability on four datasets against alternative network reconstruction methods. First, the effect of sample size on stability of inferred networks is studied in a gold standard framework on yeast-like data from the Gene Net Weaver simulator. We also consider the impact of varying modularity on a set of structurally different networks (50 nodes, from 2 to 10 modules, and then of complex feature covariance structure, showing the different behaviours of standard reconstruction methods based on Pearson correlation, Maximum Information Coefficient (MIC and False Discovery Rate (FDR strategy. Finally, we demonstrate a strong combined effect of different reconstruction methods and phenotype subgroups on a hepatocellular carcinoma miRNA microarray dataset (240 subjects, and we

  10. EnzyNet: enzyme classification using 3D convolutional neural networks on spatial representation.

    Science.gov (United States)

    Amidi, Afshine; Amidi, Shervine; Vlachakis, Dimitrios; Megalooikonomou, Vasileios; Paragios, Nikos; Zacharaki, Evangelia I

    2018-01-01

    During the past decade, with the significant progress of computational power as well as ever-rising data availability, deep learning techniques became increasingly popular due to their excellent performance on computer vision problems. The size of the Protein Data Bank (PDB) has increased more than 15-fold since 1999, which enabled the expansion of models that aim at predicting enzymatic function via their amino acid composition. Amino acid sequence, however, is less conserved in nature than protein structure and therefore considered a less reliable predictor of protein function. This paper presents EnzyNet, a novel 3D convolutional neural networks classifier that predicts the Enzyme Commission number of enzymes based only on their voxel-based spatial structure. The spatial distribution of biochemical properties was also examined as complementary information. The two-layer architecture was investigated on a large dataset of 63,558 enzymes from the PDB and achieved an accuracy of 78.4% by exploiting only the binary representation of the protein shape. Code and datasets are available at https://github.com/shervinea/enzynet.

  11. Networks of networks the last frontier of complexity

    CERN Document Server

    Scala, Antonio

    2014-01-01

    The present work is meant as a reference to provide an organic and comprehensive view of the most relevant results in the exciting new field of Networks of Networks (NetoNets). Seminal papers have recently been published posing the basis to study what happens when different networks interact, thus providing evidence for the emergence of new, unexpected behaviors and vulnerabilities. From those seminal works, the awareness on the importance understanding Networks of Networks (NetoNets) has spread to the entire community of Complexity Science. The reader will benefit from the experience of some of the most well-recognized leaders in this field. The contents have been aggregated under four headings; General Theory, Phenomenology, Applications and Risk Assessment. The reader will be impressed by the different applications of the general paradigm that span from physiology, to financial risk, to transports. We are currently making the first steps to reduce the distance between the language and the way of thinking o...

  12. Squaroglitter: A 3,4-Connected Carbon Net

    KAUST Repository

    Prasad, Dasari L. V. K.

    2013-08-13

    Theoretical calculations are presented on a new hypothetical 3,4-connected carbon net (called squaroglitter) incorporating 1,4 cyclohexadiene units. The structure has tetragonal space group P4/mmm (No. 123) symmetry. The optimized geometry shows normal distances, except for some elongated bonds in the cyclobutane ring substructures in the network. Squaroglitter has an indirect bandgap of about 1.0 eV. The hypothetical lattice, whose density is close to graphite, is more stable than other 3,4-connected carbon nets. A relationship to a (4,4)nanotube is explored, as is a potential threading of the lattice with metal needles. © 2013 American Chemical Society.

  13. Mars MetNet Mission Status

    Science.gov (United States)

    Harri, Ari-Matti; Aleksashkin, Sergei; Arruego, Ignacio; Schmidt, Walter; Genzer, Maria; Vazquez, Luis; Haukka, Harri

    2015-04-01

    New kind of planetary exploration mission for Mars is under development in collaboration between the Finnish Meteorological Institute (FMI), Lavochkin Association (LA), Space Research Institute (IKI) and Institutio Nacional de Tecnica Aerospacial (INTA). The Mars MetNet mission is based on a new semi-hard landing vehicle called MetNet Lander (MNL). The scientific payload of the Mars MetNet Precursor [1] mission is divided into three categories: Atmospheric instruments, Optical devices and Composition and structure devices. Each of the payload instruments will provide significant insights in to the Martian atmospheric behavior. The key technologies of the MetNet Lander have been qualified and the electrical qualification model (EQM) of the payload bay has been built and successfully tested. 1. MetNet Lander The MetNet landing vehicles are using an inflatable entry and descent system instead of rigid heat shields and parachutes as earlier semi-hard landing devices have used. This way the ratio of the payload mass to the overall mass is optimized. The landing impact will burrow the payload container into the Martian soil providing a more favorable thermal environment for the electronics and a suitable orientation of the telescopic boom with external sensors and the radio link antenna. It is planned to deploy several tens of MNLs on the Martian surface operating at least partly at the same time to allow meteorological network science. 2. Scientific Payload The payload of the two MNL precursor models includes the following instruments: Atmospheric instruments: 1. MetBaro Pressure device 2. MetHumi Humidity device 3. MetTemp Temperature sensors Optical devices: 1. PanCam Panoramic 2. MetSIS Solar irradiance sensor with OWLS optical wireless system for data transfer 3. DS Dust sensor The descent processes dynamic properties are monitored by a special 3-axis accelerometer combined with a 3-axis gyrometer. The data will be sent via auxiliary beacon antenna throughout the

  14. MitProNet: A knowledgebase and analysis platform of proteome, interactome and diseases for mammalian mitochondria.

    Directory of Open Access Journals (Sweden)

    Jiabin Wang

    Full Text Available Mitochondrion plays a central role in diverse biological processes in most eukaryotes, and its dysfunctions are critically involved in a large number of diseases and the aging process. A systematic identification of mitochondrial proteomes and characterization of functional linkages among mitochondrial proteins are fundamental in understanding the mechanisms underlying biological functions and human diseases associated with mitochondria. Here we present a database MitProNet which provides a comprehensive knowledgebase for mitochondrial proteome, interactome and human diseases. First an inventory of mammalian mitochondrial proteins was compiled by widely collecting proteomic datasets, and the proteins were classified by machine learning to achieve a high-confidence list of mitochondrial proteins. The current version of MitProNet covers 1124 high-confidence proteins, and the remainders were further classified as middle- or low-confidence. An organelle-specific network of functional linkages among mitochondrial proteins was then generated by integrating genomic features encoded by a wide range of datasets including genomic context, gene expression profiles, protein-protein interactions, functional similarity and metabolic pathways. The functional-linkage network should be a valuable resource for the study of biological functions of mitochondrial proteins and human mitochondrial diseases. Furthermore, we utilized the network to predict candidate genes for mitochondrial diseases using prioritization algorithms. All proteins, functional linkages and disease candidate genes in MitProNet were annotated according to the information collected from their original sources including GO, GEO, OMIM, KEGG, MIPS, HPRD and so on. MitProNet features a user-friendly graphic visualization interface to present functional analysis of linkage networks. As an up-to-date database and analysis platform, MitProNet should be particularly helpful in comprehensive studies of

  15. Detekce provozu Skype pomocí dat NetFlow

    OpenAIRE

    Šebeň, Patrik

    2012-01-01

    NetFlow je sieťový protokol bežne používaný k zberu informácií o IP tokoch. Avšak existuje možnosť, ako použiť tieto zachytené dáta k identifikácií klientov v Skype komunikácií. Táto práca pojednáva o identifikácií určitých vzorov v Skype protokole a ich detekcií v NetFlow dátach. Týmto spôsobom sme schopný identifikovať nódy a supernódy v sieti Skype. NetFlow is a network protocol commonly used for collectiong IP traffic information. But there is a way to use this collected data for inden...

  16. Mobility management in LTE heterogeneous networks

    CERN Document Server

    Karandikar, Abhay; Mehta, Mahima

    2017-01-01

    This book is the first of its kind, compiling information on the Long-Term Evolution (LTE) standards, which are enhanced to address new mobility-related challenges in Heterogeneous Networks (HetNets). It identifies the related challenges and discusses solutions and the simulation methodology for modeling HetNet mobility – cutting-edge information that was previously accessible only in the form of 3GPP specifications and documents, and research papers. The book reviews the current LTE mobility framework and discusses some of the changes for enhancing mobility management in HetNets. It describes the measurement procedures, handover (HO) mechanisms and HO success/failure scenarios. HetNets are intended to provide very high spectral efficiency while ensuring seamless coverage by deploying low-power nodes within the umbrella macrocell network. While mobility management in homogeneous networks is well understood, LTE standards are being enhanced to address the HetNet-specific mobility management challenges emergi...

  17. MosquitoNet: investigating the use of UAV and artificial neural networks for integrated mosquito management

    Science.gov (United States)

    Case, E.; Ren, Y.; Shragai, T.; Erickson, D.

    2017-12-01

    Integrated mosquito control is expensive and resource intensive, and changing climatic factors are predicted to expand the habitable range of disease-carrying mosquitoes into new regions in the United States. Of particular concern in the northeastern United States are aedes albopictus, an aggressive, invasive species of mosquito that can transmit both native and exotic disease. Ae. albopictus prefer to live near human populations and breed in artificial containers with as little as two millimeters of standing water, exponentially increasing the difficulty of source control in suburban and urban areas. However, low-cost unmanned aerial vehicles (UAVs) can be used to photograph large regions at centimeter-resolution, and can image containers of interest in suburban neighborhoods. While proofs-of-concepts have been shown using UAVs to identify naturally occurring bodies of water, they have not been used to identify mosquito habitat in more populated areas. One of the primary challenges is that post-processing high-resolution aerial imagery is still time intensive, often labelled by hand or with programs built for satellite imagery. Artificial neural networks have been highly successful at image recognition tasks; in the past five years, convolutional neural networks (CNN) have surpassed or aided trained humans in identification of skin cancer, agricultural crops, and poverty levels from satellite imagery. MosquitoNet, a dual classifier built from the Single Shot Multibox Detector and VGG16 architectures, was trained on UAV­­­­­ aerial imagery taken during a larval study in Westchester County in southern New York State in July and August 2017. MosquitoNet was designed to assess the habitat risk of suburban properties by automating the identification and counting of containers like tires, toys, garbage bins, flower pots, etc. The SSD-based architecture marked small containers and other habitat indicators while the VGG16-based architecture classified the type of

  18. Research and realization of info-net security controlling system

    Science.gov (United States)

    Xu, Tao; Zhang, Wei; Li, Xuhong; Wang, Xia; Pan, Wenwen

    2017-03-01

    The thesis introduces some relative concepts about Network Cybernetics, and we design and realize a new info-net security controlling system based on Network Cybernetics. The system can control the endpoints, safely save files, encrypt communication, supervise actions of users and show security conditions, in order to realize full-scale security management. At last, we simulate the functions of the system. The results show, the system can ensure the controllability of users and devices, and supervise them real-time. The system can maximize the security of the network and users.

  19. Net Neutrality in Canada and what it means for libraries

    Directory of Open Access Journals (Sweden)

    Alex Guindon

    2010-06-01

    Full Text Available Net Neutrality, the idea that the Internet should be provided to all without discrimination based on content or applications, has been an important policy issue in the last few years. A lack of net neutrality could negatively impact libraries, intellectual freedom, cultural diversity, and the right to privacy. This paper looks at the issues that underline the net neutrality debate and describes how they are shaped by the different actors that are concerned with the future of the Internet. Technological issues, such as traffic shaping by Internet Service Providers, and legal issues in the context of Canada’s Telecommunications Act, are also addressed. Finally, the paper reviews the recent CRTC policy on Internet Traffic Management Practices.

  20. Optical Tracking Data Validation and Orbit Estimation for Sparse Observations of Satellites by the OWL-Net.

    Science.gov (United States)

    Choi, Jin; Jo, Jung Hyun; Yim, Hong-Suh; Choi, Eun-Jung; Cho, Sungki; Park, Jang-Hyun

    2018-06-07

    An Optical Wide-field patroL-Network (OWL-Net) has been developed for maintaining Korean low Earth orbit (LEO) satellites' orbital ephemeris. The OWL-Net consists of five optical tracking stations. Brightness signals of reflected sunlight of the targets were detected by a charged coupled device (CCD). A chopper system was adopted for fast astrometric data sampling, maximum 50 Hz, within a short observation time. The astrometric accuracy of the optical observation data was validated with precise orbital ephemeris such as Consolidated Prediction File (CPF) data and precise orbit determination result with onboard Global Positioning System (GPS) data from the target satellite. In the optical observation simulation of the OWL-Net for 2017, an average observation span for a single arc of 11 LEO observation targets was about 5 min, while an average optical observation separation time was 5 h. We estimated the position and velocity with an atmospheric drag coefficient of LEO observation targets using a sequential-batch orbit estimation technique after multi-arc batch orbit estimation. Post-fit residuals for the multi-arc batch orbit estimation and sequential-batch orbit estimation were analyzed for the optical measurements and reference orbit (CPF and GPS data). The post-fit residuals with reference show few tens-of-meters errors for in-track direction for multi-arc batch and sequential-batch orbit estimation results.

  1. Optical Tracking Data Validation and Orbit Estimation for Sparse Observations of Satellites by the OWL-Net

    Directory of Open Access Journals (Sweden)

    Jin Choi

    2018-06-01

    Full Text Available An Optical Wide-field patroL-Network (OWL-Net has been developed for maintaining Korean low Earth orbit (LEO satellites’ orbital ephemeris. The OWL-Net consists of five optical tracking stations. Brightness signals of reflected sunlight of the targets were detected by a charged coupled device (CCD. A chopper system was adopted for fast astrometric data sampling, maximum 50 Hz, within a short observation time. The astrometric accuracy of the optical observation data was validated with precise orbital ephemeris such as Consolidated Prediction File (CPF data and precise orbit determination result with onboard Global Positioning System (GPS data from the target satellite. In the optical observation simulation of the OWL-Net for 2017, an average observation span for a single arc of 11 LEO observation targets was about 5 min, while an average optical observation separation time was 5 h. We estimated the position and velocity with an atmospheric drag coefficient of LEO observation targets using a sequential-batch orbit estimation technique after multi-arc batch orbit estimation. Post-fit residuals for the multi-arc batch orbit estimation and sequential-batch orbit estimation were analyzed for the optical measurements and reference orbit (CPF and GPS data. The post-fit residuals with reference show few tens-of-meters errors for in-track direction for multi-arc batch and sequential-batch orbit estimation results.

  2. Citizen Management of Technology: A Science and Technology Studies approach to wireless networks and urban governance trough guifi.net

    Directory of Open Access Journals (Sweden)

    Yann Bona Beauvois

    2011-03-01

    Full Text Available Thesis presented at the Departament de Psicologia Social de la UAB by Yann Bona on December, 2010. Directed by Dr. Joan Pujol Tarrés.This dissertation explores the many ways in which citizens aiming to manage technologies in urban scape relate to public administrations. To accomplish it's task, it brings forward certain STS notions such as cosmopolitics, hybrid composition or technical democracy. On a general level, this thesis seeks an answer to Bruno Latour concern with what does it mean to conceive the technical as political?. We offer a set of conclusions based on what we choose to name a Sociotechnique of Public Policy .Our work relies on a case study focused on a free and open wireless network (located in Catalunya for the most part and called guifi.net that emerged from the desire and will of Civil Society wich, up to date, turns out to be the world's biggest free wireless network.

  3. UbuntuNet Alliance : Consolidating Research and Education ...

    International Development Research Centre (IDRC) Digital Library (Canada)

    13 août 2009 ... UbuntuNet Alliance was established in 2005 to address these issues and foster the development of national research and education networking (NREN) in ... politique (IREEP) est un organisme indépendant à but non lucratif établi en 2004 afin de contribuer à la formation de la prochaine génération d&.

  4. Net neutrality and the value chain for video

    NARCIS (Netherlands)

    Nooren, P.A.; Leurdijk, A.; Eijk, N. van

    2012-01-01

    Purpose: Video distribution over the internet leads to heated net-neutrality related debates between network operators and over-the-top application providers. The purpose of this paper is to analyze this debate from a new perspective that takes into account all of the assets that companies try to

  5. GeoSteamNet: A computer code to simulate geothermal steam flow in a pipeline network; GeoSteamNet: Programa de computo para simular el flujo de vapor geotermico de una red de vaporductos

    Energy Technology Data Exchange (ETDEWEB)

    Verma P., Mahendra; Aragon A., Alfonso [Instituto de Investigaciones Electricas, Cuernavaca, Morelos (Mexico)]. E-mail: mahendra@iie.org.mx; Ruiz L., Alejando; Mendoza C., Alfredo [Comision Federal de Electricidad, Campo Geotermico Los Azufres, Campamento Agua Fria, Michoacan (Mexico)

    2011-07-15

    A computer package, GeoSteamNet, was developed to simulate steam transport in a pipeline network of a geothermal field. The fluid motion is governed by the following basic principles: conservation of mass, linear momentum principle (Newton's second law or the Navier Stokes equations), and the first and second laws of thermodynamics. The second law of thermodynamics defines the direction of a spontaneous process, which is indirectly validated in the algorithm as vapor flows from high-to-low pressure, and heat flows from high-to-low temperatures. The nonlinear equations are solved with the Newton-Raphson method. Using the ActiveX component OrificeMeter, the steam-flow balance was calculated for power plants U-15 and U-16 in Los Azufres Geothermal Field, Mich., in February 2009. U-15 was fed by the production wells AZ-04, AZ-28, AZ-30, AZ-65D, and AZ-66, whereas wells AZ-28A, AZ-45, AZ-56, AZ-67, AZ-69D were connected to U-16. The analytical error is within {+-}4%, which is acceptable for practical purposes for steam-supply management, considering the uncertainties in parameters, such as pressure, temperature, pressure fluctuation at the wellhead, etc. The steam simulation results by GeoSteamNet for a hypothetical-pipeline network in a geothermal system with two production wells and a power plant illustrate its functionality. Several points need to be emphasized. For a specific geometry-pipeline network, there is only a certain amount of mass (vapor) that can be transported at a given pressure at the wellheads and the power plant. The construction and modification of a pipeline network is very expensive and the production of geothermal wells depends on many natural factors; therefore, there is need to conduct a tolerance study for each component of the network. A simulation study of the virtual-pipeline network for the design of a geothermal power plant can save money, effort, and time. [Spanish] Se desarrollo un paquete de computo, GeoSteamNet, para simular el

  6. The geographic diversity of nontuberculous mycobacteria isolated from pulmonary samples: an NTM-NET collaborative study

    NARCIS (Netherlands)

    Hoefsloot, W.; Ingen, J. van; Andrejak, C.; Angeby, K.; Bauriaud, R.; Bemer, P.; Beylis, N.; Boeree, M.J.; Cacho, J.; Chihota, V.; Chimara, E.; Churchyard, G.; Cias, R.; Daza, R.; Daley, C.L.; Dekhuijzen, P.N.R.; Domingo, D.; Drobniewski, F.; Esteban, J. De; Fauville-Dufaux, M.; Folkvardsen, D.B.; Gibbons, N.; Gomez-Mampaso, E.; Gonzalez, R.; Hoffmann, H.; Hsueh, P.R.; Indra, A.; Jagielski, T.; Jamieson, F.; Jankovic, M.; Jong, E. de; Keane, J.; Koh, W.J.; Lange, B. de; Leao, S.; Macedo, R.; Mannsaker, T.; Marras, T.K.; Maugein, J.; Milburn, H.J.; Mlinko, T.; Morcillo, N.; Morimoto, K.; Papaventsis, D.; Palenque, E.; Paez-Pena, M.; Piersimoni, C.; Polanova, M.; Rastogi, N.; Richter, E.; Ruiz-Serrano, M.J.; Silva, A.; Silva, M.P. da; Simsek, H.; Soolingen, D. van; Szabo, N.; Thomson, R.; Fernandez, T. Tortola; Tortoli, E.; Totten, S.E.; Tyrrell, G.; Vasankari, T.; Villar, M.; Walkiewicz, R.; Winthrop, K.L.; Wagner, D.; Trials, G. Nontuberculous

    2013-01-01

    A significant knowledge gap exists concerning the geographical distribution of nontuberculous mycobacteria (NTM) isolation worldwide. To provide a snapshot of NTM species distribution, global partners in the NTM-Network European Trials Group (NET) framework (www.ntm-net.org), a branch of the

  7. DexterNet: An Open Platform for Heterogeneous Body Sensor Networks and Its Applications

    Science.gov (United States)

    2008-12-19

    motion, ECG PC, PDA 802.15.4 No No ALARM-NET pulse oximetry STARGATE Bluetooth No Yes [19] motion, ECG PDA, PC 802.11 (temperature, light, PIR) DexterNet...motion, ECG PDA 802.15.4 Yes Possible via SPINE EIP, GPS PC (e.g., air pollution sensor) MICAz, SHIMMER uses MICAz sensors and STARGATE to relay the

  8. RTE increased threefold its net result in 2003

    International Nuclear Information System (INIS)

    Anon.

    2004-01-01

    RTE, the company that manages the power distribution network in France, got a sharp increase in its turnover (+10%) in 2003 to reach 4035 million euros. Its net result (276 million euros) was almost 3 times as high as it was in 2002 (105 million euros). 2 factors can explain this favourable situation: - an important power demand because of climatic reasons (hot-days and winter cold spells), and - the implementation of a new tariff for the access to the distribution network all year round

  9. ObamaNet: Photo-realistic lip-sync from text

    OpenAIRE

    Kumar, Rithesh; Sotelo, Jose; Kumar, Kundan; de Brebisson, Alexandre; Bengio, Yoshua

    2017-01-01

    We present ObamaNet, the first architecture that generates both audio and synchronized photo-realistic lip-sync videos from any new text. Contrary to other published lip-sync approaches, ours is only composed of fully trainable neural modules and does not rely on any traditional computer graphics methods. More precisely, we use three main modules: a text-to-speech network based on Char2Wav, a time-delayed LSTM to generate mouth-keypoints synced to the audio, and a network based on Pix2Pix to ...

  10. RadNet Map Interface for Near-Real-Time Radiation Monitoring Data

    Data.gov (United States)

    U.S. Environmental Protection Agency — RadNet is a national network of monitoring stations that regularly collect air, precipitation, drinking water, and milk samples for analysis of radioactivity. The...

  11. Temporal Dynamics of Sensorimotor Networks in Effort-Based Cost-Benefit Valuation: Early Emergence and Late Net Value Integration.

    Science.gov (United States)

    Harris, Alison; Lim, Seung-Lark

    2016-07-06

    Although physical effort can impose significant costs on decision-making, when and how effort cost information is incorporated into choice remains contested, reflecting a larger debate over the role of sensorimotor networks in specifying behavior. Serial information processing models, in which motor circuits simply implement the output of cognitive systems, hypothesize that effort cost factors into decisions relatively late, via integration with stimulus values into net (combined) value signals in dorsomedial frontal cortex (dmFC). In contrast, ethology-inspired approaches suggest a more active role for the dorsal sensorimotor stream, with effort cost signals emerging rapidly after stimulus onset. Here we investigated the time course of effort cost integration using event-related potentials in hungry human subjects while they made decisions about expending physical effort for appetitive foods. Consistent with the ethological perspective, we found that effort cost was represented from as early as 100-250 ms after stimulus onset, localized to dorsal sensorimotor regions including middle cingulate, somatosensory, and motor/premotor cortices. However, examining the same data time-locked to motor output revealed net value signals combining stimulus value and effort cost approximately -400 ms before response, originating from sensorimotor areas including dmFC, precuneus, and posterior parietal cortex. Granger causal connectivity analysis of the motor effector signal in the time leading to response showed interactions between these sensorimotor regions and ventrolateral prefrontal cortex, a structure associated with adjusting behavior-response mappings. These results suggest that rapid activation of sensorimotor regions interacts with cognitive valuation systems, producing a net value signal reflecting both physical effort and reward contingencies. Although physical effort imposes a cost on choice, when and how effort cost influences neural correlates of decision

  12. Uncertainty estimation of the velocity model for stations of the TrigNet GPS network

    Science.gov (United States)

    Hackl, M.; Malservisi, R.; Hugentobler, U.

    2010-12-01

    Satellite based geodetic techniques - above all GPS - provide an outstanding tool to measure crustal motions. They are widely used to derive geodetic velocity models that are applied in geodynamics to determine rotations of tectonic blocks, to localize active geological features, and to estimate rheological properties of the crust and the underlying asthenosphere. However, it is not a trivial task to derive GPS velocities and their uncertainties from positioning time series. In general time series are assumed to be represented by linear models (sometimes offsets, annual, and semi-annual signals are included) and noise. It has been shown that error models accounting only for white noise tend to underestimate the uncertainties of rates derived from long time series and that different colored noise components (flicker noise, random walk, etc.) need to be considered. However, a thorough error analysis including power spectra analyses and maximum likelihood estimates is computationally expensive and is usually not carried out for every site, but the uncertainties are scaled by latitude dependent factors. Analyses of the South Africa continuous GPS network TrigNet indicate that the scaled uncertainties overestimate the velocity errors. So we applied a method similar to the Allan Variance that is commonly used in the estimation of clock uncertainties and is able to account for time dependent probability density functions (colored noise) to the TrigNet time series. Comparisons with synthetic data show that the noise can be represented quite well by a power law model in combination with a seasonal signal in agreement with previous studies, which allows for a reliable estimation of the velocity error. Finally, we compared these estimates to the results obtained by spectral analyses using CATS. Small differences may originate from non-normal distribution of the noise.

  13. FunGeneNet: a web tool to estimate enrichment of functional interactions in experimental gene sets.

    Science.gov (United States)

    Tiys, Evgeny S; Ivanisenko, Timofey V; Demenkov, Pavel S; Ivanisenko, Vladimir A

    2018-02-09

    Estimation of functional connectivity in gene sets derived from genome-wide or other biological experiments is one of the essential tasks of bioinformatics. A promising approach for solving this problem is to compare gene networks built using experimental gene sets with random networks. One of the resources that make such an analysis possible is CrossTalkZ, which uses the FunCoup database. However, existing methods, including CrossTalkZ, do not take into account individual types of interactions, such as protein/protein interactions, expression regulation, transport regulation, catalytic reactions, etc., but rather work with generalized types characterizing the existence of any connection between network members. We developed the online tool FunGeneNet, which utilizes the ANDSystem and STRING to reconstruct gene networks using experimental gene sets and to estimate their difference from random networks. To compare the reconstructed networks with random ones, the node permutation algorithm implemented in CrossTalkZ was taken as a basis. To study the FunGeneNet applicability, the functional connectivity analysis of networks constructed for gene sets involved in the Gene Ontology biological processes was conducted. We showed that the method sensitivity exceeds 0.8 at a specificity of 0.95. We found that the significance level of the difference between gene networks of biological processes and random networks is determined by the type of connections considered between objects. At the same time, the highest reliability is achieved for the generalized form of connections that takes into account all the individual types of connections. By taking examples of the thyroid cancer networks and the apoptosis network, it is demonstrated that key participants in these processes are involved in the interactions of those types by which these networks differ from random ones. FunGeneNet is a web tool aimed at proving the functionality of networks in a wide range of sizes of

  14. Tariff-Mediated Network Effects versus Strategic Discounting: Evidence from German Mobile Telecommunications

    OpenAIRE

    Zucchini, Leon; Claussen, Jörg; Trüg, Moritz

    2013-01-01

    Mobile telecommunication operators routinely charge subscribers lower prices for calls on their own network than for calls to other networks (on-net discounts). Studies on tariff-mediated network effects suggest this is due to large operators using on-net discounts to damage smaller rivals. Alternatively, research on strategic discounting suggests small operators use on-net discounts to advertise with low on-net prices. We test the relative strength of these effects using data on tariff setti...

  15. Challenges in the estimation of Net SURvival: The CENSUR working survival group.

    Science.gov (United States)

    Giorgi, R

    2016-10-01

    Net survival, the survival probability that would be observed, in a hypothetical world, where the cancer of interest would be the only possible cause of death, is a key indicator in population-based cancer studies. Accounting for mortality due to other causes, it allows cross-country comparisons or trends analysis and provides a useful indicator for public health decision-making. The objective of this study was to show how the creation and formalization of a network comprising established research teams, which already had substantial and complementary experience in both cancer survival analysis and methodological development, make it possible to meet challenges and thus provide more adequate tools, to improve the quality and the comparability of cancer survival data, and to promote methodological transfers in areas of emerging interest. The Challenges in the Estimation of Net SURvival (CENSUR) working survival group is composed of international researchers highly skilled in biostatistics, methodology, and epidemiology, from different research organizations in France, the United Kingdom, Italy, Slovenia, and Canada, and involved in French (FRANCIM) and European (EUROCARE) cancer registry networks. The expected advantages are an interdisciplinary, international, synergistic network capable of addressing problems in public health, for decision-makers at different levels; tools for those in charge of net survival analyses; a common methodology that makes unbiased cross-national comparisons of cancer survival feasible; transfer of methods for net survival estimations to other specific applications (clinical research, occupational epidemiology); and dissemination of results during an international training course. The formalization of the international CENSUR working survival group was motivated by a need felt by scientists conducting population-based cancer research to discuss, develop, and monitor implementation of a common methodology to analyze net survival in order

  16. Fiscal 1994 achievement report. International Clean Energy Network Using Hydrogen Conversion (WE-NET) technology

    Energy Technology Data Exchange (ETDEWEB)

    NONE

    1995-03-01

    Research and development was made for the WE-NET (World Energy Network) project which aims to carry out hydrogen production, transportation, and supply to consumers, by the use of renewable energy. In this fiscal year, surveys were conducted of the status of research and development in each of the fields, and research was started on element technologies in some of the fields. Under subtask 1, surveys and studies were started for pilot plant phase 2. Under subtask 2, an international symposium was held for the enhancement of technical information exchange. Under subtask 3, a liquid hydrogen system conceptual design was prepared for the estimation of facility cost, etc. Under subtask 4, small experimental cells were fabricated for evaluating electrode bonding methods. Under subtask 5, studies were made about the processes of the helium Brayton cycle and hydrogen Claude cycle for the development of a large-scale hydrogen liquefaction plant. Under subtasks 6-9, furthermore, surveys and studies were conducted about low-temperature substance technology, hydrogen energy, hydrogen combustion turbines, and so forth. (NEDO)

  17. [The European network of transfusion medicine societies (EuroNet-TMS): The White Book 2005].

    Science.gov (United States)

    Rouger, P

    2005-06-01

    Europe is building up. It develops in a quite complex environment, in which health care represents an important field of activities. As for blood transfusion, it plays a major role especially in the development of medical activities as well as for the patients treatments. Today, blood components are still of human origin and there are no substitutes for them. As a medical discipline, Blood Transfusion represents a broad field in medicine which requests the involvement of numerous actors. It is up to professional medical/scientific societies to promote the discipline. This is why it has been considered necessary and relevant to build up a federation of transfusion medicine societies throughout the European Union (EU) ; it is called EuroNet-TMS, the European Network of Transfusion Medicine Societies. This network groups more than 7500 professionals of involved in blood transfusion activities. It has six major objectives: 1) To find coherent responses to issues at stake in transfusion; 2) To promote medical and scientific developments of blood transfusion in Europe; 3) To ensure the highest and most up-to-date scientific level to meet safety and quality standards; 4) To offer similar services to all EU citizens in the field of blood transfusion; 5) To share knowledge and date within Europe; 6) To develop interfaces with decision-makers among the diverse European countries. The first step is the writing of the "White Book 2005" which reports the state of the art of blood transfusion in Europe; a prospective plan is proposed to be discussed.

  18. MobileFaceNets: Efficient CNNs for Accurate Real-time Face Verification on Mobile Devices

    OpenAIRE

    Chen, Sheng; Liu, Yang; Gao, Xiang; Han, Zhen

    2018-01-01

    In this paper, we proposed a class of extremely efficient CNN models, MobileFaceNets, which use less than 1 million parameters and are specifically tailored for high-accuracy real-time face verification on mobile and embedded devices. We first make a simple analysis on the weakness of common mobile networks for face verification. The weakness has been well overcome by our specifically designed MobileFaceNets. Under the same experimental conditions, our MobileFaceNets achieve significantly sup...

  19. The proof of the pudding is in the eating: Net neutrality in practice, the Dutch example

    NARCIS (Netherlands)

    van Eijk, N.

    2014-01-01

    The Netherlands is among the few countries that have put specific net neutrality standards in place. It was the first country to do so in the European Union. Contrary to the original European Union approach, which lacks a material implementation of net neutrality principles, the Dutch parliament

  20. Horizontal ichthyoplankton tow-net system with unobstructed net opening

    Science.gov (United States)

    Nester, Robert T.

    1987-01-01

    The larval fish sampler described here consists of a modified bridle, frame, and net system with an obstruction-free net opening and is small enough for use on boats 10 m or less in length. The tow net features a square net frame attached to a 0.5-m-diameter cylinder-on-cone plankton net with a bridle designed to eliminate all obstructions forward of the net opening, significantly reducing currents and vibrations in the water directly preceding the net. This system was effective in collecting larvae representing more than 25 species of fish at sampling depths ranging from surface to 10 m and could easily be used at greater depths.

  1. ParkinsonNet: A Low-Cost Health Care Innovation With A Systems Approach From The Netherlands

    NARCIS (Netherlands)

    Bloem, B.R.; Rompen, A.F.M.; Vries, N.M. de; Klink, A.; Munneke, M.; Jeurissen, P.P.

    2017-01-01

    ParkinsonNet, a low-cost innovation to optimize care for patients with Parkinson disease, was developed in 2004 as a network of physical therapists in several regions in the Netherlands. Since that time, the network has achieved full national reach, with 70 regional networks and around 3,000

  2. 4th workshop on complex networks CompleNet 2013

    CERN Document Server

    Poncela-Casasnovas, Julia; Tolksdorf, Robert; Complex networks IV

    2013-01-01

    A network is a mathematical object consisting of a set of points (called vertices or nodes) that are connected to each other in some fashion by lines (called edges). Turns out this simple description corresponds to a bewildering array of systems in the real world, ranging from technological ones such as the Internet and World Wide Web, biological networks such as that of connections of the nervous systems or blood vessels, food webs, protein interactions, infrastructural systems such as networks of roads, airports or the power-grid, to patterns of social acquaintance such as friendship, network of Hollywood actors, connections between business houses and many more. Recent years have witnessed a substantial amount of interest within the scientific community in the properties of these networks. The emergence of the internet in particular, coupled with the widespread availability of inexpensive computing resources has facilitated studies ranging from large scale empirical analysis of networks in t...

  3. Higher-moment measurements of net-kaon, net-charge and net-proton multiplicity distributions at STAR

    International Nuclear Information System (INIS)

    Sarkar, Amal

    2014-01-01

    In this paper, we report the measurements of the various moments, such as mean, standard deviation (σ), skewness (S) and kurtosis (κ) of the net-kaon, net-charge and net-proton multiplicity distributions at mid-rapidity in Au + Au collisions from √(s NN )=7.7 to 200 GeV with the STAR experiment at RHIC. This work has been done with the aim to locate the critical point on the QCD phase diagram. These moments and their products are related to the thermodynamic susceptibilities of conserved quantities such as net baryon number, net charge, and net strangeness as well as to the correlation length of the system which diverges in an ideal infinite thermodynamic system at the critical point. For a finite system, existing for a finite time, a non-monotonic behavior of these variables would indicate the presence of the critical point. Furthermore, we also present the moment products Sσ, κσ 2 of net-kaon, net-charge and net-proton multiplicity distributions as a function of collision centrality and energy. The energy and the centrality dependence of higher moments and their products have been compared with different models

  4. Field emission from vertically aligned few-layer graphene

    International Nuclear Information System (INIS)

    Malesevic, Alexander; Kemps, Raymond; Vanhulsel, Annick; Chowdhury, Manish Pal; Volodin, Alexander; Van Haesendonck, Chris

    2008-01-01

    The electric field emission behavior of vertically aligned few-layer graphene was studied in a parallel plate-type setup. Few-layer graphene was synthesized in the absence of any metallic catalyst by microwave plasma enhanced chemical vapor deposition with gas mixtures of methane and hydrogen. The deposit consists of nanostructures that are several micrometers wide, highly crystalline stacks of four to six atomic layers of graphene, aligned vertically to the substrate surface in a high density network. The few-layer graphene is found to be a good field emitter, characterized by turn-on fields as low as 1 V/μm and field amplification factors up to several thousands. We observe a clear dependence of the few-layer graphene field emission behavior on the synthesis parameters: Hydrogen is identified as an efficient etchant to improve field emission, and samples grown on titanium show lower turn-on field values and higher amplification factors when compared to samples grown on silicon

  5. New - Nucleus - NucNet. The ENS triple communication system

    Energy Technology Data Exchange (ETDEWEB)

    Feuz, Peter [ENS and NucNet (Belgium); Holt, Peter [Nuclear Europe Worldscan and Nucleus (Belgium)

    1993-07-01

    The ENS triple communication system was built up as a step-by-step response to practical needs. In fact the triple communication system has the fourth issue, namely WINFO. Nuclear Europe was started in 1981 with three pilot issues. Now, Nuclear Europe Worldscan has become an integrator, between over 20 000 members of ENS Member Societies, from the Atlantic to the Urals and beyond; an integrator between Europe and the rest-of-the world nuclear community; between industry and science and engineering; between the bosses and the staff; and finally, an integrator between the nuclear community and those outsiders who take an interest in nuclear issues. Nucleus started in 1987, selected by the ENS Steering Committee for as the most worthwhile for transferring messages from nuclear community to the politicians and opinion-leaders, i.e. to non-technical outsiders. It is a briefing sheet for people who work with key policy principles, politicians and journalists. It is designed and written for people having no time to read. The keys to each two-page Nucleus are headlines. Nucleus appears in English, French, Croatian, Russian, Dutch, Hungarian, Romanian and Finnish. When the need grew really urgent for Europe, the ENS Information Committee proposed a feasibility study, which the European nuclear community entrusted to ENS in 1989. NucNet was launched in January 1991 - first as a European, and later as a truly worldwide, communications system. NucNet is the worldwide network which circulates nuclear news and information that the public should be informed of, written in a language that the public can easily understand. NucNet is highly appreciated, for instance, by NPP managers because they are informed about incidents faster than by any other means. But, NucNet is not merely an incident reporting system. (As a general rule, the network only reports on incidents in nuclear plants if they are rated at level 2 or above on the IAEA's International Nuclear Event Scale). The more

  6. New - Nucleus - NucNet. The ENS triple communication system

    International Nuclear Information System (INIS)

    Feuz, Peter; Holt, Peter

    1993-01-01

    The ENS triple communication system was built up as a step-by-step response to practical needs. In fact the triple communication system has the fourth issue, namely WINFO. Nuclear Europe was started in 1981 with three pilot issues. Now, Nuclear Europe Worldscan has become an integrator, between over 20 000 members of ENS Member Societies, from the Atlantic to the Urals and beyond; an integrator between Europe and the rest-of-the world nuclear community; between industry and science and engineering; between the bosses and the staff; and finally, an integrator between the nuclear community and those outsiders who take an interest in nuclear issues. Nucleus started in 1987, selected by the ENS Steering Committee for as the most worthwhile for transferring messages from nuclear community to the politicians and opinion-leaders, i.e. to non-technical outsiders. It is a briefing sheet for people who work with key policy principles, politicians and journalists. It is designed and written for people having no time to read. The keys to each two-page Nucleus are headlines. Nucleus appears in English, French, Croatian, Russian, Dutch, Hungarian, Romanian and Finnish. When the need grew really urgent for Europe, the ENS Information Committee proposed a feasibility study, which the European nuclear community entrusted to ENS in 1989. NucNet was launched in January 1991 - first as a European, and later as a truly worldwide, communications system. NucNet is the worldwide network which circulates nuclear news and information that the public should be informed of, written in a language that the public can easily understand. NucNet is highly appreciated, for instance, by NPP managers because they are informed about incidents faster than by any other means. But, NucNet is not merely an incident reporting system. (As a general rule, the network only reports on incidents in nuclear plants if they are rated at level 2 or above on the IAEA's International Nuclear Event Scale). The more

  7. Predicting Protein Function via Semantic Integration of Multiple Networks.

    Science.gov (United States)

    Yu, Guoxian; Fu, Guangyuan; Wang, Jun; Zhu, Hailong

    2016-01-01

    Determining the biological functions of proteins is one of the key challenges in the post-genomic era. The rapidly accumulated large volumes of proteomic and genomic data drives to develop computational models for automatically predicting protein function in large scale. Recent approaches focus on integrating multiple heterogeneous data sources and they often get better results than methods that use single data source alone. In this paper, we investigate how to integrate multiple biological data sources with the biological knowledge, i.e., Gene Ontology (GO), for protein function prediction. We propose a method, called SimNet, to Semantically integrate multiple functional association Networks derived from heterogenous data sources. SimNet firstly utilizes GO annotations of proteins to capture the semantic similarity between proteins and introduces a semantic kernel based on the similarity. Next, SimNet constructs a composite network, obtained as a weighted summation of individual networks, and aligns the network with the kernel to get the weights assigned to individual networks. Then, it applies a network-based classifier on the composite network to predict protein function. Experiment results on heterogenous proteomic data sources of Yeast, Human, Mouse, and Fly show that, SimNet not only achieves better (or comparable) results than other related competitive approaches, but also takes much less time. The Matlab codes of SimNet are available at https://sites.google.com/site/guoxian85/simnet.

  8. China's Chemical Information Online Service: ChI2Net.

    Science.gov (United States)

    Naiyan, Yu; And Others

    1997-01-01

    Describes the Chemical Integrated Information Service Network (ChI2Net), a comprehensive online information service system which includes chemical, technical, economic, market, news, and management information based on computer and modern communication technology that was built by the China National Chemical Information Centre. (Author/LRW)

  9. Report on Networking and Programming Languages 2017

    KAUST Repository

    Bjorner, Nikolaj

    2017-10-26

    The third workshop on Networking and Programming Lan-guages, NetPL 2017, was held in conjunction with SIG-COMM 2017. The workshop series attracts invited speakers from academia and industry and a selection of contributed abstracts for short presentations. NetPL brings together re-searchers from the networking community and researchers from the programming languages and verification communities. The workshop series is a timely forum for exciting trends, technological and scientific advances in the intersection of these communities. We describe some of the high-lights from the invited talks through the lens of three trends: Advances in network machine architectures, network programming abstractions, and network verification. NetPL included five invited speakers, four from academia, and one from industry. The program contained six contributed talks out of eight submitted for presentation. The workshop organizers reviewed the abstracts for quality and scope. A total of 42 registrations were received and the attendance occupied the lecture room to the brink. Slides and abstracts from all talks are available from the workshop home page.1 Videos of the presentations are available in the NetPL YouTube channel.2.

  10. Report on Networking and Programming Languages 2017

    KAUST Repository

    Bjorner, Nikolaj; Canini, Marco; Sultana, Nik

    2017-01-01

    The third workshop on Networking and Programming Lan-guages, NetPL 2017, was held in conjunction with SIG-COMM 2017. The workshop series attracts invited speakers from academia and industry and a selection of contributed abstracts for short presentations. NetPL brings together re-searchers from the networking community and researchers from the programming languages and verification communities. The workshop series is a timely forum for exciting trends, technological and scientific advances in the intersection of these communities. We describe some of the high-lights from the invited talks through the lens of three trends: Advances in network machine architectures, network programming abstractions, and network verification. NetPL included five invited speakers, four from academia, and one from industry. The program contained six contributed talks out of eight submitted for presentation. The workshop organizers reviewed the abstracts for quality and scope. A total of 42 registrations were received and the attendance occupied the lecture room to the brink. Slides and abstracts from all talks are available from the workshop home page.1 Videos of the presentations are available in the NetPL YouTube channel.2.

  11. NetNorM: Capturing cancer-relevant information in somatic exome mutation data with gene networks for cancer stratification and prognosis.

    Science.gov (United States)

    Le Morvan, Marine; Zinovyev, Andrei; Vert, Jean-Philippe

    2017-06-01

    Genome-wide somatic mutation profiles of tumours can now be assessed efficiently and promise to move precision medicine forward. Statistical analysis of mutation profiles is however challenging due to the low frequency of most mutations, the varying mutation rates across tumours, and the presence of a majority of passenger events that hide the contribution of driver events. Here we propose a method, NetNorM, to represent whole-exome somatic mutation data in a form that enhances cancer-relevant information using a gene network as background knowledge. We evaluate its relevance for two tasks: survival prediction and unsupervised patient stratification. Using data from 8 cancer types from The Cancer Genome Atlas (TCGA), we show that it improves over the raw binary mutation data and network diffusion for these two tasks. In doing so, we also provide a thorough assessment of somatic mutations prognostic power which has been overlooked by previous studies because of the sparse and binary nature of mutations.

  12. Windows .NET Network Distributed Basic Local Alignment Search Toolkit (W.ND-BLAST

    Directory of Open Access Journals (Sweden)

    Oliver Melvin J

    2005-04-01

    Full Text Available Abstract Background BLAST is one of the most common and useful tools for Genetic Research. This paper describes a software application we have termed Windows .NET Distributed Basic Local Alignment Search Toolkit (W.ND-BLAST, which enhances the BLAST utility by improving usability, fault recovery, and scalability in a Windows desktop environment. Our goal was to develop an easy to use, fault tolerant, high-throughput BLAST solution that incorporates a comprehensive BLAST result viewer with curation and annotation functionality. Results W.ND-BLAST is a comprehensive Windows-based software toolkit that targets researchers, including those with minimal computer skills, and provides the ability increase the performance of BLAST by distributing BLAST queries to any number of Windows based machines across local area networks (LAN. W.ND-BLAST provides intuitive Graphic User Interfaces (GUI for BLAST database creation, BLAST execution, BLAST output evaluation and BLAST result exportation. This software also provides several layers of fault tolerance and fault recovery to prevent loss of data if nodes or master machines fail. This paper lays out the functionality of W.ND-BLAST. W.ND-BLAST displays close to 100% performance efficiency when distributing tasks to 12 remote computers of the same performance class. A high throughput BLAST job which took 662.68 minutes (11 hours on one average machine was completed in 44.97 minutes when distributed to 17 nodes, which included lower performance class machines. Finally, there is a comprehensive high-throughput BLAST Output Viewer (BOV and Annotation Engine components, which provides comprehensive exportation of BLAST hits to text files, annotated fasta files, tables, or association files. Conclusion W.ND-BLAST provides an interactive tool that allows scientists to easily utilizing their available computing resources for high throughput and comprehensive sequence analyses. The install package for W.ND-BLAST is

  13. MPL-net at ARM Sites

    Science.gov (United States)

    Spinhirne, J. D.; Welton, E. J.; Campbell, J. R.; Berkoff, T. A.; Starr, David OC. (Technical Monitor)

    2002-01-01

    The NASA MPL-net project goal is consistent data products of the vertical distribution of clouds and aerosol from globally distributed lidar observation sites. The four ARM micro pulse lidars are a basis of the network to consist of over twelve sites. The science objective is ground truth for global satellite retrievals and accurate vertical distribution information in combination with surface radiation measurements for aerosol and cloud models. The project involves improvement in instruments and data processing and cooperation with ARM and other partners.

  14. Base Station Placement Algorithm for Large-Scale LTE Heterogeneous Networks.

    Science.gov (United States)

    Lee, Seungseob; Lee, SuKyoung; Kim, Kyungsoo; Kim, Yoon Hyuk

    2015-01-01

    Data traffic demands in cellular networks today are increasing at an exponential rate, giving rise to the development of heterogeneous networks (HetNets), in which small cells complement traditional macro cells by extending coverage to indoor areas. However, the deployment of small cells as parts of HetNets creates a key challenge for operators' careful network planning. In particular, massive and unplanned deployment of base stations can cause high interference, resulting in highly degrading network performance. Although different mathematical modeling and optimization methods have been used to approach various problems related to this issue, most traditional network planning models are ill-equipped to deal with HetNet-specific characteristics due to their focus on classical cellular network designs. Furthermore, increased wireless data demands have driven mobile operators to roll out large-scale networks of small long term evolution (LTE) cells. Therefore, in this paper, we aim to derive an optimum network planning algorithm for large-scale LTE HetNets. Recently, attempts have been made to apply evolutionary algorithms (EAs) to the field of radio network planning, since they are characterized as global optimization methods. Yet, EA performance often deteriorates rapidly with the growth of search space dimensionality. To overcome this limitation when designing optimum network deployments for large-scale LTE HetNets, we attempt to decompose the problem and tackle its subcomponents individually. Particularly noting that some HetNet cells have strong correlations due to inter-cell interference, we propose a correlation grouping approach in which cells are grouped together according to their mutual interference. Both the simulation and analytical results indicate that the proposed solution outperforms the random-grouping based EA as well as an EA that detects interacting variables by monitoring the changes in the objective function algorithm in terms of system

  15. Evaluation of Internet Social Networks using Net scoring Tool: A Case Study in Adverse Drug Reaction Mining.

    Science.gov (United States)

    Katsahian, Sandrine; Simond Moreau, Erica; Leprovost, Damien; Lardon, Jeremy; Bousquet, Cedric; Kerdelhué, Gaétan; Abdellaoui, Redhouane; Texier, Nathalie; Burgun, Anita; Boussadi, Abdelali; Faviez, Carole

    2015-01-01

    Suspected adverse drug reactions (ADR) reported by patients through social media can be a complementary tool to already existing ADRs signal detection processes. However, several studies have shown that the quality of medical information published online varies drastically whatever the health topic addressed. The aim of this study is to use an existing rating tool on a set of social network web sites in order to assess the capabilities of these tools to guide experts for selecting the most adapted social network web site to mine ADRs. First, we reviewed and rated 132 Internet forums and social networks according to three major criteria: the number of visits, the notoriety of the forum and the number of messages posted in relation with health and drug therapy. Second, the pharmacist reviewed the topic-oriented message boards with a small number of drug names to ensure that they were not off topic. Six experts have been chosen to assess the selected internet forums using a French scoring tool: Net scoring. Three different scores and the agreement between experts according to each set of scores using weighted kappa pooled using mean have been computed. Three internet forums were chosen at the end of the selection step. Some criteria get high score (scores 3-4) no matter the website evaluated like accessibility (45-46) or design (34-36), at the opposite some criteria always have bad scores like quantitative (40-42) and ethical aspect (43-44), hyperlinks actualization (30-33). Kappa were positives but very small which corresponds to a weak agreement between experts. The personal opinion of the expert seems to have a major impact, undermining the relevance of the criterion. Our future work is to collect results given by this evaluation grid and proposes a new scoring tool for Internet social networks assessment.

  16. NeMO-Net & Fluid Lensing: The Neural Multi-Modal Observation & Training Network for Global Coral Reef Assessment Using Fluid Lensing Augmentation of NASA EOS Data

    Science.gov (United States)

    Chirayath, Ved

    2018-01-01

    We present preliminary results from NASA NeMO-Net, the first neural multi-modal observation and training network for global coral reef assessment. NeMO-Net is an open-source deep convolutional neural network (CNN) and interactive active learning training software in development which will assess the present and past dynamics of coral reef ecosystems. NeMO-Net exploits active learning and data fusion of mm-scale remotely sensed 3D images of coral reefs captured using fluid lensing with the NASA FluidCam instrument, presently the highest-resolution remote sensing benthic imaging technology capable of removing ocean wave distortion, as well as hyperspectral airborne remote sensing data from the ongoing NASA CORAL mission and lower-resolution satellite data to determine coral reef ecosystem makeup globally at unprecedented spatial and temporal scales. Aquatic ecosystems, particularly coral reefs, remain quantitatively misrepresented by low-resolution remote sensing as a result of refractive distortion from ocean waves, optical attenuation, and remoteness. Machine learning classification of coral reefs using FluidCam mm-scale 3D data show that present satellite and airborne remote sensing techniques poorly characterize coral reef percent living cover, morphology type, and species breakdown at the mm, cm, and meter scales. Indeed, current global assessments of coral reef cover and morphology classification based on km-scale satellite data alone can suffer from segmentation errors greater than 40%, capable of change detection only on yearly temporal scales and decameter spatial scales, significantly hindering our understanding of patterns and processes in marine biodiversity at a time when these ecosystems are experiencing unprecedented anthropogenic pressures, ocean acidification, and sea surface temperature rise. NeMO-Net leverages our augmented machine learning algorithm that demonstrates data fusion of regional FluidCam (mm, cm-scale) airborne remote sensing with

  17. The MeSO-net (Metropolitan Seismic Observation network) confronts the Pacific Coast of Tohoku Earthquake, Japan (Mw 9.0)

    Science.gov (United States)

    Kasahara, K.; Nakagawa, S.; Sakai, S.; Nanjo, K.; Panayotopoulos, Y.; Morita, Y.; Tsuruoka, H.; Kurashimo, E.; Obara, K.; Hirata, N.; Aketagawa, T.; Kimura, H.

    2011-12-01

    On April 2007, we have launched the special project for earthquake disaster mitigation in the Tokyo Metropolitan area (Fiscal 2007-2011). As a part of this project, construction of the MeSO-net (Metropolitan Seismic Observation network) has been completed, with about 300 stations deployed at mainly elementary and junior-high schools with an interval of about 5 km in space. This results in a highly dense network that covers the metropolitan area. To achieve stable seismic observation with lower surface ground noise, relative to a measurement on the surface, sensors of all stations were installed in boreholes at a depth of about 20m. The sensors have a wide dynamic range (135dB) and a wide frequency band (DC to 80Hz). Data are digitized with 200Hz sampling and telemetered to the Earthquake Research Institute, University of Tokyo. The MeSO-net that can detect and locate most earthquakes with magnitudes above 2.5 provides a unique baseline in scientific and engineering researches on the Tokyo metropolitan area, as follows. One of the main contributions is to greatly improve the image of the Philippine Sea plate (PSP) (Nakagawa et al., 2010) and provides an accurate estimation of the plate boundaries between the PSP and the Pacific plate, allowing us to possibly discuss clear understanding of the relation between the PSP deformation and M7+ intra-slab earthquake generation. Also, the latest version of the plate model in the metropolitan area, proposed by our project, attracts various researchers, comparing with highly-accurate solutions of fault mechanism, repeating earthquakes, etc. Moreover, long-periods ground motions generated by the 2011 earthquake off the Pacific coast of Tohoku earthquake (Mw 9.0) were observed by the MeSO-net and analyzed to obtain the Array Back-Projection Imaging of this event (Honda et al., 2011). As a result, the overall pattern of the imaged asperities coincides well with the slip distribution determined based on other waveform inversion

  18. Modeling and performance analysis of a closed-loop supply chain using first-order hybrid Petri nets

    Directory of Open Access Journals (Sweden)

    Imane Outmal

    2016-05-01

    Full Text Available Green or closed-loop supply chain had been the focus of many manufacturers during the last decade. The application of closed-loop supply chain in today’s manufacturing is not only due to growing environmental concerns and the recognition of its benefits in reducing greenhouse gas emissions, energy consumption, and meeting a more strict environmental regulations but it also offers economic competitive advantages if appropriately managed. First-order hybrid Petri nets represent a powerful graphical and mathematical formalism to map and analyze the dynamics of complex systems such as closed-loop supply chain networks. This article aims at illustrating the use of first-order hybrid Petri nets to model a closed-loop supply chain network and evaluate its operational, financial, and environmental performance measures under different management policies. Actual data from auto manufacturer in the United States are used to validate network’s performance under both tactical and strategic decision-making, namely, (1 tactical decision—production policies: increase of recovered versus new components and (2 strategic decision—closed-loop supply chain network structure: manufacturer internal recovery process or recovery process done by a third-party collection and recovery center. The work presented in this article is an extension of the use of first-order hybrid Petri nets as a modeling and performance analysis tool from supply chain to closed-loop supply chain. The modularity property of first-order hybrid Petri nets has been used in the modeling process, and the simulation and analysis of the modeled network are done in MATLAB® environment. The results of the experiments depict that first-order hybrid Petri nets are a powerful modeling and analysis formalism for closed-loop supply chain networks and can be further used as an efficient decision-making tool at both tactical and strategic levels. Unlike other researches on modeling supply chain

  19. Net-baryon-, net-proton-, and net-charge kurtosis in heavy-ion collisions within a relativistic transport approach

    International Nuclear Information System (INIS)

    Nahrgang, Marlene; Schuster, Tim; Stock, Reinhard; Mitrovski, Michael; Bleicher, Marcus

    2012-01-01

    We explore the potential of net-baryon, net-proton and net-charge kurtosis measurements to investigate the properties of hot and dense matter created in relativistic heavy-ion collisions. Contrary to calculations in a grand-canonical ensemble we explicitly take into account exact electric and baryon charge conservation on an event-by-event basis. This drastically limits the width of baryon fluctuations. A simple model to account for this is to assume a grand-canonical distribution with a sharp cut-off at the tails. We present baseline predictions of the energy dependence of the net-baryon, net-proton and net-charge kurtosis for central (b≤2.75 fm) Pb+Pb/Au+Au collisions from E lab =2A GeV to √(s NN )=200 GeV from the UrQMD model. While the net-charge kurtosis is compatible with values around zero, the net-baryon number decreases to large negative values with decreasing beam energy. The net-proton kurtosis becomes only slightly negative for low √(s NN ). (orig.)

  20. Game Algorithm for Resource Allocation Based on Intelligent Gradient in HetNet

    Directory of Open Access Journals (Sweden)

    Fang Ye

    2017-02-01

    Full Text Available In order to improve system performance such as throughput, heterogeneous network (HetNet has become an effective solution in Long Term Evolution-Advanced (LET-A. However, co-channel interference leads to degradation of the HetNet throughput, because femtocells are always arranged to share the spectrum with the macro base station. In this paper, in view of the serious cross-layer interference in double layer HetNet, the Stackelberg game model is adopted to analyze the resource allocation methods of the network. Unlike the traditional system models only focusing on macro base station performance improvement, we take into account the overall system performance and build a revenue function with convexity. System utility functions are defined as the average throughput, which does not adopt frequency spectrum trading method, so as to avoid excessive signaling overhead. Due to the value scope of continuous Nash equilibrium of the built game model, the gradient iterative algorithm is introduced to reduce the computational complexity. As for the solution of Nash equilibrium, one kind of gradient iterative algorithm is proposed, which is able to intelligently choose adjustment factors. The Nash equilibrium can be quickly solved; meanwhile, the step of presetting adjustment factors is avoided according to network parameters in traditional linear iterative model. Simulation results show that the proposed algorithm enhances the overall performance of the system.

  1. A method of generating moving objects on the constrained network

    Science.gov (United States)

    Zhang, Jie; Ma, Linbing

    2008-10-01

    Moving objects databases have become an important research issue in recent years. In case large real data sets acquired by GPS, PDA or other mobile devices are not available, benchmarking requires the generation of artificial data sets following the real-world behavior of spatial objects that change their locations over time. In the field of spatiotemporal databases, a number of publications about the generation of test data are restricted to few papers. However, most of the existing moving-object generators assume a fixed and often unrealistic mobility model and do not consider several important characteristics of the network. In this paper, a new generator is presented to solve these problems. First of all, the network is realistic transportation network of Guangzhou. Second, the observation records of vehicle flow are available. Third, in order to simplify the whole simulation process and to help us visualize the process, this framework is built under .Net development platform of Microsoft and ArcEngine9 environment.

  2. Towards Optimal Transport Networks

    Directory of Open Access Journals (Sweden)

    Erik P. Vargo

    2010-08-01

    Full Text Available Our ultimate goal is to design transportation net- works whose dynamic performance metrics (e.g. pas- senger throughput, passenger delay, and insensitivity to weather disturbances are optimized. Here the fo- cus is on optimizing static features of the network that are known to directly affect the network dynamics. First, we present simulation results which support a connection between maximizing the first non-trivial eigenvalue of a network's Laplacian and superior air- port network performance. Then, we explore the ef- fectiveness of a tabu search heuristic for optimizing this metric by comparing experimental results to the- oretical upper bounds. We also consider generating upper bounds on a network's algebraic connectivity via the solution of semidefinite programming (SDP relaxations. A modification of an existing subgraph extraction algorithm is implemented to explore the underlying regional structures in the U.S. airport net- work, with the hope that the resulting localized struc- tures can be optimized independently and reconnected via a "backbone" network to achieve superior network performance.

  3. 1999 annual summary report on results. International clean energy network using hydrogen conversion (WE-NET)

    Energy Technology Data Exchange (ETDEWEB)

    NONE

    2000-03-01

    The R and D were conducted on the international clean network (WE-NET) which aims at producing hydrogen by using renewable energy, converting it in a form suitable for transportation and supplying the hydrogen to places of quantity consumption of energy. The FY 1999 results were summed up. In the system evaluation, study was made on sodium carbonate electrolysis by-producing hydrogen, the supply amount by coke oven by-producing hydrogen and the economical efficiency, etc. As to the safety, study was made on the design of hydrogen supply stand model. Concerning the power generation technology, study was conducted on element technologies of injection valve, exhaust gas condenser, gas/liquid separator, etc. Relating to the hydrogen fueled vehicle system, the shock destructive testing, etc. were conducted on the hydrogen tank and hydrogen storage alloys. Besides, a lot of R and D were carried out of pure water use solid polymer fuel cells, hydrogen stand, hydrogen production technology, hydrogen transportation/storage technology, low temperature materials, transportation/storage using hydrogen storage alloys, innovative advanced technology, etc. (NEDO)

  4. Reconstruction of neutron spectra through neural networks

    International Nuclear Information System (INIS)

    Vega C, H.R.; Hernandez D, V.M.; Manzanares A, E.

    2003-01-01

    A neural network has been used to reconstruct the neutron spectra starting from the counting rates of the detectors of the Bonner sphere spectrophotometric system. A group of 56 neutron spectra was selected to calculate the counting rates that would produce in a Bonner sphere system, with these data and the spectra it was trained the neural network. To prove the performance of the net, 12 spectra were used, 6 were taken of the group used for the training, 3 were obtained of mathematical functions and those other 3 correspond to real spectra. When comparing the original spectra of those reconstructed by the net we find that our net has a poor performance when reconstructing monoenergetic spectra, this attributes it to those characteristic of the spectra used for the training of the neural network, however for the other groups of spectra the results of the net are appropriate with the prospective ones. (Author)

  5. HYPERION NET - a distributed measurement system for monitoring background ionizing radiation

    International Nuclear Information System (INIS)

    Saponjic, Dj.; Zigic, A.; Arandjelovic, V.

    2003-01-01

    The distributed measurement system - HYPERION NET, based on the concept of FieldBus technology, has been developed, implemented, and tested as a pilot project, the first WEB enabled on-line networked ionizing radiation monitoring and measurement system. The Net has layered the structure, tree topology, and is based on the Internet infrastructure and TCP/IP communication protocol. The Net's core element is an intelligent GM transmitter, based on GM tube, used for measuring the absorbed dose in air, in the range of 0.087 to 720 μGy/h. The transmitter makes use of an advanced count rate measurement algorithm capable of suppressing the statistical fluctuations of the measured quantity, which significantly improves its measurement performance mailing it suitable for environmental radiation measurements. (author)

  6. Teaching Russian Via Distance Learning, the EdNet Experience.

    Science.gov (United States)

    Zsiray, Stephen W., Jr.; And Others

    In Utah, the statewide distance education network (EdNet) enables students from five rural and suburban high schools to learn Russian and earn college credits. Courses in Russian are offered through a partnership involving the Cache County School District, Utah State University, and the Utah State Office of Education. Classes are taught on one…

  7. Petri Nets

    Indian Academy of Sciences (India)

    In a computer system, for example, typical discrete events ... This project brought out a series of influential reports on Petri net theory in the mid and late ... Technology became a leading centre for Petri net research and from then on, Petri nets ...

  8. Why OR.NET? Requirements and perspectives from a medical user's, clinical operator's and device manufacturer's points of view.

    Science.gov (United States)

    Czaplik, Michael; Voigt, Verena; Kenngott, Hannes; Clusmann, Hans; Hoffmann, Rüdiger; Will, Armin

    2018-02-23

    In the past decades, modern medicine has been undergoing a change in the direction of digitalisation and automation. Not only the integration of new digital technologies, but also the interconnection of all components can simplify clinical processes and allow progress and development of new innovations. The integration and interconnection of medical devices with each other and with information technology (IT) systems was addressed within the framework of the Federal Ministry of Education and Research (BMBF)-funded lighthouse project OR.NET ("Secure dynamic networking in the operating room and clinic".) (OR.net-Forschungskonsortium (OR.net Research Syndicate.) OR.net - Sichere dynamische Vernetzung in Operationssaal und Klinik [Online]. Available: www.ornet.org. [last accessed 22 March 2017]). In this project the standards and concepts for interdisciplinary networking in the operating room (OR) were developed. In this paper, the diverse advantages of the OR.NET concept are presented and explained by the OR.NET "Medical Board". This board represents the forum of clinical users and includes clinicians and experts from various specialties. Furthermore, the opinion from the viewpoint of operators is presented. In a concluding comment of the "Operator Board", clinical user needs are aligned with technical requirements.

  9. Neural networks for aircraft control

    Science.gov (United States)

    Linse, Dennis

    1990-01-01

    Current research in Artificial Neural Networks indicates that networks offer some potential advantages in adaptation and fault tolerance. This research is directed at determining the possible applicability of neural networks to aircraft control. The first application will be to aircraft trim. Neural network node characteristics, network topology and operation, neural network learning and example histories using neighboring optimal control with a neural net are discussed.

  10. Auto-Context Convolutional Neural Network (Auto-Net) for Brain Extraction in Magnetic Resonance Imaging.

    Science.gov (United States)

    Mohseni Salehi, Seyed Sadegh; Erdogmus, Deniz; Gholipour, Ali

    2017-11-01

    Brain extraction or whole brain segmentation is an important first step in many of the neuroimage analysis pipelines. The accuracy and the robustness of brain extraction, therefore, are crucial for the accuracy of the entire brain analysis process. The state-of-the-art brain extraction techniques rely heavily on the accuracy of alignment or registration between brain atlases and query brain anatomy, and/or make assumptions about the image geometry, and therefore have limited success when these assumptions do not hold or image registration fails. With the aim of designing an accurate, learning-based, geometry-independent, and registration-free brain extraction tool, in this paper, we present a technique based on an auto-context convolutional neural network (CNN), in which intrinsic local and global image features are learned through 2-D patches of different window sizes. We consider two different architectures: 1) a voxelwise approach based on three parallel 2-D convolutional pathways for three different directions (axial, coronal, and sagittal) that implicitly learn 3-D image information without the need for computationally expensive 3-D convolutions and 2) a fully convolutional network based on the U-net architecture. Posterior probability maps generated by the networks are used iteratively as context information along with the original image patches to learn the local shape and connectedness of the brain to extract it from non-brain tissue. The brain extraction results we have obtained from our CNNs are superior to the recently reported results in the literature on two publicly available benchmark data sets, namely, LPBA40 and OASIS, in which we obtained the Dice overlap coefficients of 97.73% and 97.62%, respectively. Significant improvement was achieved via our auto-context algorithm. Furthermore, we evaluated the performance of our algorithm in the challenging problem of extracting arbitrarily oriented fetal brains in reconstructed fetal brain magnetic

  11. Transactions on Petri Nets and Other Models of Concurrency VI

    DEFF Research Database (Denmark)

    The sixth volume of ToPNoC includes revised versions of selected papers from workshops and tutorials held at the 32nd International Conference on Application and Theory of Petri Nets and Concurrency. It also contains a special section on Networks, Protocols, and Services, as well as a contributed...

  12. PulseNet International: Vision for the implementation of whole genome sequencing (WGS) for global food-borne disease surveillance.

    NARCIS (Netherlands)

    Nadon, Celine; Van Walle, Ivo; Gerner-Smidt, Peter; Campos, Josefina; Chinen, Isabel; Concepcion-Acevedo, Jeniffer; Gilpin, Brent; Smith, Anthony M; Man Kam, Kai; Perez, Enrique; Trees, Eija; Kubota, Kristy; Takkinen, Johanna; Nielsen, Eva Møller; Carleton, Heather

    2017-01-01

    PulseNet International is a global network dedicated to laboratory-based surveillance for food-borne diseases. The network comprises the national and regional laboratory networks of Africa, Asia Pacific, Canada, Europe, Latin America and the Caribbean, the Middle East, and the United States. The

  13. SDN Based User-Centric Framework for Heterogeneous Wireless Networks

    Directory of Open Access Journals (Sweden)

    Zhaoming Lu

    2016-01-01

    Full Text Available Due to the rapid growth of mobile data traffic, more and more basestations and access points (APs have been densely deployed to provide users with ubiquitous network access, which make current wireless network a complex heterogeneous network (HetNet. However, traditional wireless networks are designed with network-centric approaches where different networks have different quality of service (QoS strategies and cannot easily cooperate with each other to serve network users. Massive network infrastructures could not assure users perceived network and service quality, which is an indisputable fact. To address this issue, we design a new framework for heterogeneous wireless networks with the principle of user-centricity, refactoring the network from users’ perspective to suffice their requirements and preferences. Different from network-centric approaches, the proposed framework takes advantage of Software Defined Networking (SDN and virtualization technology, which will bring better perceived services quality for wireless network users. In the proposed user-centric framework, control plane and data plane are decoupled to manage the HetNets in a flexible and coadjutant way, and resource virtualization technology is introduced to abstract physical resources of HetNets into unified virtualized resources. Hence, ubiquitous and undifferentiated network connectivity and QoE (quality of experience driven fine-grained resource management could be achieved for wireless network users.

  14. Global Surface Net-Radiation at 5 km from MODIS Terra

    Directory of Open Access Journals (Sweden)

    Manish Verma

    2016-09-01

    Full Text Available Reliable and fine resolution estimates of surface net-radiation are required for estimating latent and sensible heat fluxes between the land surface and the atmosphere. However, currently, fine resolution estimates of net-radiation are not available and consequently it is challenging to develop multi-year estimates of evapotranspiration at scales that can capture land surface heterogeneity and are relevant for policy and decision-making. We developed and evaluated a global net-radiation product at 5 km and 8-day resolution by combining mutually consistent atmosphere and land data from the Moderate Resolution Imaging Spectroradiometer (MODIS on board Terra. Comparison with net-radiation measurements from 154 globally distributed sites (414 site-years from the FLUXNET and Surface Radiation budget network (SURFRAD showed that the net-radiation product agreed well with measurements across seasons and climate types in the extratropics (Wilmott’s index ranged from 0.74 for boreal to 0.63 for Mediterranean sites. Mean absolute deviation between the MODIS and measured net-radiation ranged from 38.0 ± 1.8 W∙m−2 in boreal to 72.0 ± 4.1 W∙m−2 in the tropical climates. The mean bias was small and constituted only 11%, 0.7%, 8.4%, 4.2%, 13.3%, and 5.4% of the mean absolute error in daytime net-radiation in boreal, Mediterranean, temperate-continental, temperate, semi-arid, and tropical climate, respectively. To assess the accuracy of the broader spatiotemporal patterns, we upscaled error-quantified MODIS net-radiation and compared it with the net-radiation estimates from the coarse spatial (1° × 1° but high temporal resolution gridded net-radiation product from the Clouds and Earth’s Radiant Energy System (CERES. Our estimates agreed closely with the net-radiation estimates from the CERES. Difference between the two was less than 10 W·m−2 in 94% of the total land area. MODIS net-radiation product will be a valuable resource for the

  15. NucNet's growing impact on the media - Now the official figures

    International Nuclear Information System (INIS)

    Ashton, Jack; Lewis, Chris

    1998-01-01

    Full text: The growing impact of NucNet on the news media has been a topic highlighted at previous PIMEs.On a couple of occasions, concrete examples have been given of NucNet being used by journalists writing about nuclear energy issues. These have consisted of newspaper clippings and copies of news agency reports. Some instances of NucNet material being used by the broadcast media have also been reported on. It should be pointed out that we are talking here about evaluating NucNet's worth purely on the basis of news stories carried by news agencies and newspapers which actually quote NucNet as a source. It is impossible to monitor and measure the full impact and influence that NucNet has on the reporting of nuclear. From the NucNet Central Office in Berne, it is not possible to see everything that goes on - to see how all network members pass on NucNet material to their media contacts and to see the end results. In addition, journalists are not under some sort of legally binding agreement to always quote NucNet as the source. There have been many cases where it has been clear that NucNet material has been used without NucNet being quoted directly by name. NucNet also influences the news judgement of journalists. For instance, a news editor might be inclined to go for a nuclear story that takes a particular (anti-nuclear) line provided by Greenpeace. But that person might have second thoughts on seeing the version of the same story supplied by NucNet, providing original information from the source directly involved. The news editor then has the opportunity to see both sides of the story and make a more accurate evaluation. With the additional information from NucNet, the result could be a properly balanced news story, or the news editor could decide to drop the story completely. Either way, we are talking about factors that are impossible to pin down and measure. In such circumstances, only case studies can be given. This means that so far the evaluation of NucNet

  16. Colorectal Cancer Safety Net: Is It Catching Patients Appropriately?

    Science.gov (United States)

    Althans, Alison R; Brady, Justin T; Times, Melissa L; Keller, Deborah S; Harvey, Alexis R; Kelly, Molly E; Patel, Nilam D; Steele, Scott R

    2018-01-01

    Disparities in access to colorectal cancer care are multifactorial and are affected by socioeconomic elements. Uninsured and Medicaid patients present with advanced stage disease and have worse outcomes compared with similar privately insured patients. Safety net hospitals are a major care provider to this vulnerable population. Few studies have evaluated outcomes for safety net hospitals compared with private institutions in colorectal cancer. The purpose of this study was to compare demographics, screening rates, presentation stage, and survival rates between a safety net hospital and a tertiary care center. Comparative review of patients at 2 institutions in the same metropolitan area were conducted. The study included colorectal cancer care delivered either at 1 safety net hospital or 1 private tertiary care center in the same city from 2010 to 2016. A total of 350 patients with colorectal cancer from each hospital were evaluated. Overall survival across hospital systems was measured. The safety net hospital had significantly more uninsured and Medicaid patients (46% vs 13%; p presentation, a similar percentage of patients at each hospital presented with stage IV disease (26% vs 20%; p = 0.06). For those undergoing resection, final pathologic stage distribution was similar across groups (p = 0.10). After a comparable median follow-up period (26.6 mo for safety net hospital vs 29.2 mo for tertiary care center), log-rank test for overall survival favored the safety net hospital (p = 0.05); disease-free survival was similar between hospitals (p = 0.40). This was a retrospective review, reporting from medical charts. Our results support the value of safety net hospitals for providing quality colorectal cancer care, with survival and recurrence outcomes equivalent or improved compared with a local tertiary care center. Because safety net hospitals can provide equivalent outcomes despite socioeconomic inequalities and financial constraints, emphasis should be focused

  17. GEM2Net: from gene expression modeling to -omics networks, a new CATdb module to investigate Arabidopsis thaliana genes involved in stress response.

    Science.gov (United States)

    Zaag, Rim; Tamby, Jean Philippe; Guichard, Cécile; Tariq, Zakia; Rigaill, Guillem; Delannoy, Etienne; Renou, Jean-Pierre; Balzergue, Sandrine; Mary-Huard, Tristan; Aubourg, Sébastien; Martin-Magniette, Marie-Laure; Brunaud, Véronique

    2015-01-01

    CATdb (http://urgv.evry.inra.fr/CATdb) is a database providing a public access to a large collection of transcriptomic data, mainly for Arabidopsis but also for other plants. This resource has the rare advantage to contain several thousands of microarray experiments obtained with the same technical protocol and analyzed by the same statistical pipelines. In this paper, we present GEM2Net, a new module of CATdb that takes advantage of this homogeneous dataset to mine co-expression units and decipher Arabidopsis gene functions. GEM2Net explores 387 stress conditions organized into 18 biotic and abiotic stress categories. For each one, a model-based clustering is applied on expression differences to identify clusters of co-expressed genes. To characterize functions associated with these clusters, various resources are analyzed and integrated: Gene Ontology, subcellular localization of proteins, Hormone Families, Transcription Factor Families and a refined stress-related gene list associated to publications. Exploiting protein-protein interactions and transcription factors-targets interactions enables to display gene networks. GEM2Net presents the analysis of the 18 stress categories, in which 17,264 genes are involved and organized within 681 co-expression clusters. The meta-data analyses were stored and organized to compose a dynamic Web resource. © The Author(s) 2014. Published by Oxford University Press on behalf of Nucleic Acids Research.

  18. The equivalency between logic Petri workflow nets and workflow nets.

    Science.gov (United States)

    Wang, Jing; Yu, ShuXia; Du, YuYue

    2015-01-01

    Logic Petri nets (LPNs) can describe and analyze batch processing functions and passing value indeterminacy in cooperative systems. Logic Petri workflow nets (LPWNs) are proposed based on LPNs in this paper. Process mining is regarded as an important bridge between modeling and analysis of data mining and business process. Workflow nets (WF-nets) are the extension to Petri nets (PNs), and have successfully been used to process mining. Some shortcomings cannot be avoided in process mining, such as duplicate tasks, invisible tasks, and the noise of logs. The online shop in electronic commerce in this paper is modeled to prove the equivalence between LPWNs and WF-nets, and advantages of LPWNs are presented.

  19. The Equivalency between Logic Petri Workflow Nets and Workflow Nets

    Science.gov (United States)

    Wang, Jing; Yu, ShuXia; Du, YuYue

    2015-01-01

    Logic Petri nets (LPNs) can describe and analyze batch processing functions and passing value indeterminacy in cooperative systems. Logic Petri workflow nets (LPWNs) are proposed based on LPNs in this paper. Process mining is regarded as an important bridge between modeling and analysis of data mining and business process. Workflow nets (WF-nets) are the extension to Petri nets (PNs), and have successfully been used to process mining. Some shortcomings cannot be avoided in process mining, such as duplicate tasks, invisible tasks, and the noise of logs. The online shop in electronic commerce in this paper is modeled to prove the equivalence between LPWNs and WF-nets, and advantages of LPWNs are presented. PMID:25821845

  20. International Clean Energy System Using Hydrogen Conversion (WE-NET). subtask 3. Study on the global network; Suiso riyo kokusai clean energy system gijutsu (WE-NET). subtask 3. Global network kenkyu

    Energy Technology Data Exchange (ETDEWEB)

    NONE

    1997-03-01

    As a part of the WE-NET project, the introduction condition of hydrogen as substituting energy and CO2 reduction effect were analyzed using a global energy model. The WE-NET project aims at global-wide introduction of clean energy by converting abundant renewable clean energy into hydrogen transportable to distant consumers all over the world. The study result in fiscal 1996 is as follows. Undeveloped hydroelectric resources in the world are estimated to be 12 trillion kWh/y equivalent to the existing developed one in the world. Since the cost of the hydroelectric power generation projects over 1000MW in the planning stage is estimated to be 0.02-0.05$/kWh lower than that of other renewable energies, such projects are expected as energy source in the initial stage of the practical WE-NET project. The GREEN model was modified by adding a hydrogen analysis function, and extending an analysis period. The modified model allowed evaluation of the long-term important role of hydrogen energy, in particular, the capability of CO2 gas reduction all over the world. 28 refs., 92 figs., 56 tabs.

  1. Health impact and cost-effectiveness of a private sector bed net distribution: experimental evidence from Zambia.

    Science.gov (United States)

    Sedlmayr, Richard; Fink, Günther; Miller, John M; Earle, Duncan; Steketee, Richard W

    2013-03-18

    Relatively few programmes have attempted to actively engage the private sector in national malaria control efforts. This paper evaluates the health impact of a large-scale distribution of insecticide-treated nets (ITNs) conducted in partnership with a Zambian agribusiness, and its cost-effectiveness from the perspective of the National Malaria Control Programme (NMCP). The study was designed as a cluster-randomized controlled trial. A list of 81,597 cotton farmers was obtained from Dunavant, a contract farming company in Zambia's cotton sector, in December 2010. 39,963 (49%) were randomly selected to obtain one ITN each. Follow-up interviews were conducted with 438 farmers in the treatment and 458 farmers in the control group in June and July 2011. Treatment and control households were compared with respect to bed net ownership, bed net usage, self-reported fever, and self-reported confirmed malaria. Cost data was collected throughout the programme. The distribution effectively reached target beneficiaries, with approximately 95% of households in the treatment group reporting that they had received an ITN through the programme. The average increase in the fraction of household members sleeping under an ITN the night prior to the interview was 14.6 percentage points (p-value US$ per ITN to Zambia's NMCP. The results illustrate that existing private sector networks can efficiently control malaria in remote rural regions. The intra-household allocation of ITNs distributed through this channel was comparable to that of ITNs received from other sources, and the health impact remained substantial.

  2. GXNOR-Net: Training deep neural networks with ternary weights and activations without full-precision memory under a unified discretization framework.

    Science.gov (United States)

    Deng, Lei; Jiao, Peng; Pei, Jing; Wu, Zhenzhi; Li, Guoqi

    2018-04-01

    Although deep neural networks (DNNs) are being a revolutionary power to open up the AI era, the notoriously huge hardware overhead has challenged their applications. Recently, several binary and ternary networks, in which the costly multiply-accumulate operations can be replaced by accumulations or even binary logic operations, make the on-chip training of DNNs quite promising. Therefore there is a pressing need to build an architecture that could subsume these networks under a unified framework that achieves both higher performance and less overhead. To this end, two fundamental issues are yet to be addressed. The first one is how to implement the back propagation when neuronal activations are discrete. The second one is how to remove the full-precision hidden weights in the training phase to break the bottlenecks of memory/computation consumption. To address the first issue, we present a multi-step neuronal activation discretization method and a derivative approximation technique that enable the implementing the back propagation algorithm on discrete DNNs. While for the second issue, we propose a discrete state transition (DST) methodology to constrain the weights in a discrete space without saving the hidden weights. Through this way, we build a unified framework that subsumes the binary or ternary networks as its special cases, and under which a heuristic algorithm is provided at the website https://github.com/AcrossV/Gated-XNOR. More particularly, we find that when both the weights and activations become ternary values, the DNNs can be reduced to sparse binary networks, termed as gated XNOR networks (GXNOR-Nets) since only the event of non-zero weight and non-zero activation enables the control gate to start the XNOR logic operations in the original binary networks. This promises the event-driven hardware design for efficient mobile intelligence. We achieve advanced performance compared with state-of-the-art algorithms. Furthermore, the computational sparsity

  3. Evaluation of Cyber Security and Modelling of Risk Propagation with Petri Nets

    Directory of Open Access Journals (Sweden)

    Marcin Szpyrka

    2017-02-01

    Full Text Available This article presents a new method of risk propagation among associated elements. On thebasis of coloured Petri nets, a new class called propagation nets is defined. This class providesa formal model of a risk propagation. The proposed method allows for model relations betweennodes forming the network structure. Additionally, it takes into account the bidirectional relationsbetween components as well as relations between isomorphic, symmetrical components in variousbranches of the network. This method is agnostic in terms of use in various systems and it canbe adapted to the propagation model of any systems’ characteristics; however, it is intentionallyproposed to assess the risk of critical infrastructures. In this paper, as a proof of concept example, weshow the formal model of risk propagation proposed within the project Cyberspace Security ThreatsEvaluation System of the Republic of Poland. In the article, the idea of the method is presented aswell as its use case for evaluation of risk for cyber threats. With the adaptation of Petri nets, it ispossible to evaluate the risk for the particular node and assess the impact of this risk for all relatednodes including hierarchic relations of components as well as isomorphism of elements.

  4. The NetQuakes Project - Seeking a Balance Between Science and Citizens.

    Science.gov (United States)

    Luetgert, J. H.; Oppenheimer, D. H.

    2012-12-01

    The challenge for any system that uses volunteer help to do science is to dependably acquire quality data without unduly burdening the volunteer. The NetQuakes accelerograph and its data acquisition system were created to address the recognized need for more densely sampled strong ground motion recordings in urban areas to provide more accurate ShakeMaps for post-earthquake disaster assessment and to provide data for structural engineers to improve design standards. The recorder has 18 bit resolution with ±3g internal tri-axial MEMS accelerometers. Data are continuously recorded at 200 sps into a 1-2 week ringbuffer. When triggered, a miniSEED file is sent to USGS servers via the Internet. Data can also be recovered from the ringbuffer by a remote request through the NetQuakes servers. Following a power failure, the instrument can run for 36 hours using its internal battery. We rely upon cooperative citizens to host the dataloggers, provide power and Internet connectivity and perform minor servicing. Instrument and battery replacement are simple tasks that can be performed by hosts, thus reducing maintenance costs. Communication with the instrument to acquire data or deliver firmware is accomplished by file transfers using NetQuakes servers. The client instrument initiates all client-server interactions, so it safely resides behind a host's firewall. A connection to the host's LAN, and from there to the public Internet, can be made using WiFi to minimize cabling. Although timing using a cable to an external GPS antenna is possible, it is simpler to use the Network Time Protocol (NTP) to discipline the internal clock. This approach achieves timing accuracy substantially better than a sample interval. Since 2009, we have installed more than 140 NetQuakes instruments in the San Francisco Bay Area and have successfully integrated their data into the near real time data stream of the Northern California Seismic System. An additional 235 NetQuakes instruments have been

  5. Gap filling strategies for defensible annual sums of net ecosystem exchange

    NARCIS (Netherlands)

    Falge, E.; Baldocchi, D.; Olson, R.; Anthoni, P.; Aubinet, M.; Bernhofer, C.; Burba, G.; Ceulemans, R.; Clement, R.; Dolman, H.; Granier, A.; Gross, P.; Grünwald, T.; Hollinger, D.; Jensen, N.O.; Katul, G.; Keronen, P.; Kowalski, A.; Lai, C.T.; Law, B.E.; Meyers, T.; Moncrieff, J.; Moors, E.J.; Munger, J.W.; Pilegaard, K.; Rebmann, C.; Suyker, A.; Tenhunen, J.; Tu, K.

    2001-01-01

    Heightened awareness of global change issues within both science and political communities has increased interest in using the global network of eddy covariance flux towers to more fully understand the impacts of natural and anthropogenic phenomena on the global carbon balance. Comparisons of net

  6. Fourth international conference on Networks & Communications

    CERN Document Server

    Meghanathan, Natarajan; Nagamalai, Dhinaharan; Computer Networks & Communications (NetCom)

    2013-01-01

    Computer Networks & Communications (NetCom) is the proceedings from the Fourth International Conference on Networks & Communications. This book covers theory, methodology and applications of computer networks, network protocols and wireless networks, data communication technologies, and network security. The proceedings will feature peer-reviewed papers that illustrate research results, projects, surveys and industrial experiences that describe significant advances in the diverse areas of computer networks & communications.

  7. A Petri Nets Model for Blockchain Analysis

    OpenAIRE

    Pinna, Andrea; Tonelli, Roberto; Orrú, Matteo; Marchesi, Michele

    2017-01-01

    A Blockchain is a global shared infrastructure where cryptocurrency transactions among addresses are recorded, validated and made publicly available in a peer- to-peer network. To date the best known and important cryptocurrency is the bitcoin. In this paper we focus on this cryptocurrency and in particular on the modeling of the Bitcoin Blockchain by using the Petri Nets formalism. The proposed model allows us to quickly collect information about identities owning Bitcoin addresses and to re...

  8. Coloured Petri Nets

    DEFF Research Database (Denmark)

    Jensen, Kurt

    1987-01-01

    The author describes a Petri net model, called coloured Petri nets (CP-nets), by means of which it is possible to describe large systems without having to cope with unnecessary details. The author introduces CP-nets and provide a first impression of their modeling power and the suitability...

  9. MetBaro - Pressure Device for Mars MetNet Lander

    Science.gov (United States)

    Haukka, Harri; Polkko, Jouni; Harri, Ari-Matti; Schmidt, Walter; Leinonen, Jussi; Genzer, Maria; Mäkinen, Teemu

    2010-05-01

    MetNet Mars Mission focused for Martian atmospheric science is based on a new semihard landing vehicle called the MetNet Lander (MNL). The MNL will have a versatile science payload focused on the atmospheric science of Mars. The scientific payload of the MetNet Mission encompasses separate instrument packages for the atmospheric entry and descent phase and for the surface operation phase. MetBaro is the pressure sensor of MetNet Lander designed to work on Martian surface. It is based on Barocap® technology developed by Vaisala, Inc. MetBaro is a capacitive type of sensing device where capasitor plates are moved by ambient pressure. MetBaro device consists of two pressure transducers including a total of 4 Barocap® sensor heads of high-stability and high-resolution types. The long-term stability of MetBaro is in order of 20…50 µBar and resolution a few µBar. MetBaro is small, lightweighed and has low power consumption. It weighs about 50g without wires and controlling FPGA, and consumes 15 mW of power. A similar device has successfully flown in Phoenix mission, where it performed months of measurements on Martian ground. Another device is also part of the Mars Science Laboratory REMS instrument (to be launched in 2011).

  10. SynechoNET: integrated protein-protein interaction database of a model cyanobacterium Synechocystis sp. PCC 6803

    OpenAIRE

    Kim, Woo-Yeon; Kang, Sungsoo; Kim, Byoung-Chul; Oh, Jeehyun; Cho, Seongwoong; Bhak, Jong; Choi, Jong-Soon

    2008-01-01

    Background Cyanobacteria are model organisms for studying photosynthesis, carbon and nitrogen assimilation, evolution of plant plastids, and adaptability to environmental stresses. Despite many studies on cyanobacteria, there is no web-based database of their regulatory and signaling protein-protein interaction networks to date. Description We report a database and website SynechoNET that provides predicted protein-protein interactions. SynechoNET shows cyanobacterial domain-domain interactio...

  11. High-throughput and low-latency network communication with NetIO

    CERN Document Server

    AUTHOR|(CDS)2088631; The ATLAS collaboration

    2017-01-01

    HPC network technologies like Infiniband, TrueScale or OmniPath provide low-latency and high-throughput communication between hosts, which makes them attractive options for data-acquisition systems in large-scale high-energy physics experiments. Like HPC networks, DAQ networks are local and include a well specified number of systems. Unfortunately traditional network communication APIs for HPC clusters like MPI or PGAS target exclusively the HPC community and are not suited well for DAQ applications. It is possible to build distributed DAQ applications using low-level system APIs like Infiniband Verbs, but it requires a non-negligible effort and expert knowledge. At the same time, message services like ZeroMQ have gained popularity in the HEP community. They allow building distributed applications with a high-level approach and provide good performance. Unfortunately their usage usually limits developers to TCP/IP-based networks. While it is possible to operate a TCP/IP stack on top of Infiniband and OmniPath...

  12. Web 2.0 and the Net Generation - A Critical Perspective

    DEFF Research Database (Denmark)

    Ryberg, Thomas

    2012-01-01

    In the recent years, social media and web 2.0 have been hot topics within educational debates and within the research area of networked learning. The latter is evident from symposia and papers from the last years' networked learning conferences, but also European research projects, special issues......, and books have revolved around social media, web 2.0, personal learning environments, student-centred learning, and student-generated content. Alongside these internet developments we have witnessed debates on what schools and universities can do to cater to the 'net-generation' or the 'digital natives' in...

  13. Network protocols and sockets

    OpenAIRE

    BALEJ, Marek

    2010-01-01

    My work will deal with network protocols and sockets and their use in programming language C#. It will therefore deal programming network applications on the platform .NET from Microsoft and instruments, which C# provides to us. There will describe the tools and methods for programming network applications, and shows a description and sample applications that work with sockets and application protocols.

  14. Therapy of metastatic pancreatic neuroendocrine tumors (pNETs). Recent insights and advances

    International Nuclear Information System (INIS)

    Ito, Tetsuhide; Igarashi, Hisato; Jensen, R.T.

    2012-01-01

    Neuroendocrine tumors (NETs) [carcinoids, pancreatic neuroendocrine tumors (pNETs)] are becoming an increasing clinical problem because not only are they increasing in frequency, but they can frequently present with advanced disease that requires diagnostic and treatment approaches different from those used in the neoplasms that most physicians are used to seeing and treating. In the past few years there have been numerous advances in all aspects of NETs including: an understanding of their unique pathogenesis; specific classification systems developed which have prognostic value; novel methods of tumor localization developed; and novel treatment approaches described. In patients with advanced metastatic disease these include the use of newer chemotherapeutic approaches, an increased understanding of the role of surgery and cytoreductive methods, the development of methods for targeted delivery of cytotoxic agents, and the development of targeted medical therapies (everolimus, sunitinib) based on an increased understanding of the disease biology. Although pNETs and gastrointestinal NETs share many features, recent studies show they differ in pathogenesis and in many aspects of diagnosis and treatment, including their responsiveness to different therapies. Because of limited space, this review will be limited to the advances made in the management and treatment of patients with advanced metastatic pNETs over the past 5 years. (author)

  15. MoleculeNet: a benchmark for molecular machine learning.

    Science.gov (United States)

    Wu, Zhenqin; Ramsundar, Bharath; Feinberg, Evan N; Gomes, Joseph; Geniesse, Caleb; Pappu, Aneesh S; Leswing, Karl; Pande, Vijay

    2018-01-14

    Molecular machine learning has been maturing rapidly over the last few years. Improved methods and the presence of larger datasets have enabled machine learning algorithms to make increasingly accurate predictions about molecular properties. However, algorithmic progress has been limited due to the lack of a standard benchmark to compare the efficacy of proposed methods; most new algorithms are benchmarked on different datasets making it challenging to gauge the quality of proposed methods. This work introduces MoleculeNet, a large scale benchmark for molecular machine learning. MoleculeNet curates multiple public datasets, establishes metrics for evaluation, and offers high quality open-source implementations of multiple previously proposed molecular featurization and learning algorithms (released as part of the DeepChem open source library). MoleculeNet benchmarks demonstrate that learnable representations are powerful tools for molecular machine learning and broadly offer the best performance. However, this result comes with caveats. Learnable representations still struggle to deal with complex tasks under data scarcity and highly imbalanced classification. For quantum mechanical and biophysical datasets, the use of physics-aware featurizations can be more important than choice of particular learning algorithm.

  16. Impact of the 2001 Tohoku-oki earthquake to Tokyo Metropolitan area observed by the Metropolitan Seismic Observation network (MeSO-net)

    Science.gov (United States)

    Hirata, N.; Hayashi, H.; Nakagawa, S.; Sakai, S.; Honda, R.; Kasahara, K.; Obara, K.; Aketagawa, T.; Kimura, H.; Sato, H.; Okaya, D. A.

    2011-12-01

    The March 11, 2011 Tohoku-oki earthquake brought a great impact to the Tokyo metropolitan area in both seismological aspect and seismic risk management although Tokyo is located 340 km from the epicenter. The event generated very strong ground motion even in the metropolitan area and resulted severe requifaction in many places of Kanto district. National and local governments have started to discuss counter measurement for possible seismic risks in the area taking account for what they learned from the Tohoku-oki event which is much larger than ever experienced in Japan Risk mitigation strategy for the next greater earthquake caused by the Philippine Sea plate (PSP) subducting beneath the Tokyo metropolitan area is of major concern because it caused past mega-thrust earthquakes, such as the 1703 Genroku earthquake (M8.0) and the 1923 Kanto earthquake (M7.9). An M7 or greater (M7+) earthquake in this area at present has high potential to produce devastating loss of life and property with even greater global economic repercussions. The Central Disaster Management Council of Japan estimates that an M7+ earthquake will cause 11,000 fatalities and 112 trillion yen (about 1 trillion US$) economic loss. In order to mitigate disaster for greater Tokyo, the Special Project for Earthquake Disaster Mitigation in the Tokyo Metropolitan Area was launched in collaboration with scientists, engineers, and social-scientists in nationwide institutions. We will discuss the main results that are obtained in the respective fields which have been integrated to improve information on the strategy assessment for seismic risk mitigation in the Tokyo metropolitan area; the project has been much improved after the Tohoku event. In order to image seismic structure beneath the Metropolitan Tokyo area we have developed Metropolitan Seismic Observation network (MeSO-net; Hirata et al., 2009). We have installed 296 seismic stations every few km (Kasahara et al., 2011). We conducted seismic

  17. Fifth International Conference on Networks & Communications

    CERN Document Server

    Nagamalai, Dhinaharan; Rajasekaran, Sanguthevar

    2014-01-01

    This book covers theory, methodology and applications of computer networks, network protocols and wireless networks, data communication technologies, and network security. The book is based on the proceedings from the Fifth International Conference on Networks & Communications (NetCom). The proceedings will feature peer-reviewed papers that illustrate research results, projects, surveys and industrial experiences that describe significant advances in the diverse areas of computer networks & communications.

  18. Gear selectivity of large-mesh nets and drumlines used to catch ...

    African Journals Online (AJOL)

    Catches of sharks and bycatch in large-mesh nets and baited drumlines used by the Queensland Shark Control Program were examined to determine the efficacy of both gear types and assess fishing strategies that minimise their impacts. There were few significant differences in the size of both sharks and bycatch in the ...

  19. Multi-focus and multi-level techniques for visualization and analysis of networks with thematic data

    Science.gov (United States)

    Cossalter, Michele; Mengshoel, Ole J.; Selker, Ted

    2013-01-01

    Information-rich data sets bring several challenges in the areas of visualization and analysis, even when associated with node-link network visualizations. This paper presents an integration of multi-focus and multi-level techniques that enable interactive, multi-step comparisons in node-link networks. We describe NetEx, a visualization tool that enables users to simultaneously explore different parts of a network and its thematic data, such as time series or conditional probability tables. NetEx, implemented as a Cytoscape plug-in, has been applied to the analysis of electrical power networks, Bayesian networks, and the Enron e-mail repository. In this paper we briefly discuss visualization and analysis of the Enron social network, but focus on data from an electrical power network. Specifically, we demonstrate how NetEx supports the analytical task of electrical power system fault diagnosis. Results from a user study with 25 subjects suggest that NetEx enables more accurate isolation of complex faults compared to an especially designed software tool.

  20. NETS - Danish participation. Final report

    Energy Technology Data Exchange (ETDEWEB)

    Alsen, S. (Grontmij - Carl Bro, Glostrup (Denmark)); Theel, C. (Baltic Sea Solutions, Holeby (Denmark))

    2008-12-15

    Within the NICe-funded project 'Nordic Environmental Technology Solutions (NETS)' a new type of networking at the Nordic level was organized in order to jointly exploit the rapidly growing market potential in the environmental technology sector. The project aimed at increased and professionalized commercialization of Nordic Cleantech in energy and water business segments through 1) closer cooperation and joint marketing activities, 2) a website, 3) cleantech product information via brochures and publications 4) and participating in relevant trade fairs and other industry events. Facilitating business-to-business activities was another core task for the NETS project partners from Norway, Sweden, Finland and Denmark with the aim to encourage total solutions for combined Cleantech system offers. The project has achieved to establish a Cleantech register of 600 Nordic Cleantech companies, a network of 86 member enterprises, produced several publications and brochures for direct technology promotion and a website for direct access to company profiles and contact data. The project partners have attended 14 relevant international Cleantech trade fairs and conferences and facilitated business-to-business contacts added by capacity building offers through two company workshops. The future challenge for the project partners and Nordic Cleantech will be to coordinate the numerous efforts within the Nordic countries in order to reach concerted action and binding of member companies for reliable services, an improved visibility and knowledge exchange. With Cleantech's growing market influence and public awareness, the need to develop total solutions is increasing likewise. Marketing efforts should be encouraged cross-sectional and cross-border among the various levels of involved actors from both the public and the private sector. (au)

  1. NETS - Danish participation. Final report

    Energy Technology Data Exchange (ETDEWEB)

    Alsen, S [Grontmij - Carl Bro, Glostrup (Denmark); Theel, C [Baltic Sea Solutions, Holeby (Denmark)

    2008-12-15

    Within the NICe-funded project 'Nordic Environmental Technology Solutions (NETS)' a new type of networking at the Nordic level was organized in order to jointly exploit the rapidly growing market potential in the environmental technology sector. The project aimed at increased and professionalized commercialization of Nordic Cleantech in energy and water business segments through 1) closer cooperation and joint marketing activities, 2) a website, 3) cleantech product information via brochures and publications 4) and participating in relevant trade fairs and other industry events. Facilitating business-to-business activities was another core task for the NETS project partners from Norway, Sweden, Finland and Denmark with the aim to encourage total solutions for combined Cleantech system offers. The project has achieved to establish a Cleantech register of 600 Nordic Cleantech companies, a network of 86 member enterprises, produced several publications and brochures for direct technology promotion and a website for direct access to company profiles and contact data. The project partners have attended 14 relevant international Cleantech trade fairs and conferences and facilitated business-to-business contacts added by capacity building offers through two company workshops. The future challenge for the project partners and Nordic Cleantech will be to coordinate the numerous efforts within the Nordic countries in order to reach concerted action and binding of member companies for reliable services, an improved visibility and knowledge exchange. With Cleantech's growing market influence and public awareness, the need to develop total solutions is increasing likewise. Marketing efforts should be encouraged cross-sectional and cross-border among the various levels of involved actors from both the public and the private sector. (au)

  2. NiftyNet: a deep-learning platform for medical imaging.

    Science.gov (United States)

    Gibson, Eli; Li, Wenqi; Sudre, Carole; Fidon, Lucas; Shakir, Dzhoshkun I; Wang, Guotai; Eaton-Rosen, Zach; Gray, Robert; Doel, Tom; Hu, Yipeng; Whyntie, Tom; Nachev, Parashkev; Modat, Marc; Barratt, Dean C; Ourselin, Sébastien; Cardoso, M Jorge; Vercauteren, Tom

    2018-05-01

    Medical image analysis and computer-assisted intervention problems are increasingly being addressed with deep-learning-based solutions. Established deep-learning platforms are flexible but do not provide specific functionality for medical image analysis and adapting them for this domain of application requires substantial implementation effort. Consequently, there has been substantial duplication of effort and incompatible infrastructure developed across many research groups. This work presents the open-source NiftyNet platform for deep learning in medical imaging. The ambition of NiftyNet is to accelerate and simplify the development of these solutions, and to provide a common mechanism for disseminating research outputs for the community to use, adapt and build upon. The NiftyNet infrastructure provides a modular deep-learning pipeline for a range of medical imaging applications including segmentation, regression, image generation and representation learning applications. Components of the NiftyNet pipeline including data loading, data augmentation, network architectures, loss functions and evaluation metrics are tailored to, and take advantage of, the idiosyncracies of medical image analysis and computer-assisted intervention. NiftyNet is built on the TensorFlow framework and supports features such as TensorBoard visualization of 2D and 3D images and computational graphs by default. We present three illustrative medical image analysis applications built using NiftyNet infrastructure: (1) segmentation of multiple abdominal organs from computed tomography; (2) image regression to predict computed tomography attenuation maps from brain magnetic resonance images; and (3) generation of simulated ultrasound images for specified anatomical poses. The NiftyNet infrastructure enables researchers to rapidly develop and distribute deep learning solutions for segmentation, regression, image generation and representation learning applications, or extend the platform to new

  3. NeMO-Net - The Neural Multi-Modal Observation & Training Network for Global Coral Reef Assessment

    Science.gov (United States)

    Li, A. S. X.; Chirayath, V.; Segal-Rosenhaimer, M.; Das, K.

    2017-12-01

    In the past decade, coral reefs worldwide have experienced unprecedented stresses due to climate change, ocean acidification, and anthropomorphic pressures, instigating massive bleaching and die-off of these fragile and diverse ecosystems. Furthermore, remote sensing of these shallow marine habitats is hindered by ocean wave distortion, refraction and optical attenuation, leading invariably to data products that are often of low resolution and signal-to-noise (SNR) ratio. However, recent advances in UAV and Fluid Lensing technology have allowed us to capture multispectral 3D imagery of these systems at sub-cm scales from above the water surface, giving us an unprecedented view of their growth and decay. Exploiting the fine-scaled features of these datasets, machine learning methods such as MAP, PCA, and SVM can not only accurately classify the living cover and morphology of these reef systems (below 8% error), but are also able to map the spectral space between airborne and satellite imagery, augmenting and improving the classification accuracy of previously low-resolution datasets.We are currently implementing NeMO-Net, the first open-source deep convolutional neural network (CNN) and interactive active learning and training software to accurately assess the present and past dynamics of coral reef ecosystems through determination of percent living cover and morphology. NeMO-Net will be built upon the QGIS platform to ingest UAV, airborne and satellite datasets from various sources and sensor capabilities, and through data-fusion determine the coral reef ecosystem makeup globally at unprecedented spatial and temporal scales. To achieve this, we will exploit virtual data augmentation, the use of semi-supervised learning, and active learning through a tablet platform allowing for users to manually train uncertain or difficult to classify datasets. The project will make use of Python's extensive libraries for machine learning, as well as extending integration to GPU

  4. NaNet-10: a 10GbE network interface card for the GPU-based low-level trigger of the NA62 RICH detector

    International Nuclear Information System (INIS)

    Ammendola, R.; Biagioni, A.; Frezza, O.; Lonardo, A.; Cicero, F. Lo; Martinelli, M.; Paolucci, P.S.; Pastorelli, E.; Simula, F.; Tosoratto, L.; Vicini, P.; Fiorini, M.; Neri, I.; Lamanna, G.; Piandani, R.; Pontisso, L.; Sozzi, M.; Rossetti, D.

    2016-01-01

    A GPU-based low level (L0) trigger is currently integrated in the experimental setup of the RICH detector of the NA62 experiment to assess the feasibility of building more refined physics-related trigger primitives and thus improve the trigger discriminating power. To ensure the real-time operation of the system, a dedicated data transport mechanism has been implemented: an FPGA-based Network Interface Card (NaNet-10) receives data from detectors and forwards them with low, predictable latency to the memory of the GPU performing the trigger algorithms. Results of the ring-shaped hit patterns reconstruction will be reported and discussed

  5. Cooperate to Validate. Observal-Net Experts' Report on Validation of Non-Formal and Informal Learning (VNIL) 2013

    Science.gov (United States)

    Weber Guisan, Saskia; Voit, Janine; Lengauer, Sonja; Proinger, Eva; Duvekot, Ruud; Aagaard, Kirsten

    2014-01-01

    The present publication is one of the outcomes of the OBSERVAL-NET project (followup of the OBSERVAL project). The main aim of OBSERVAL-NET was to set up a stakeholder centric network of organisations supporting the validation of non-formal and informal learning in Europe based on the formation of national working groups in the 8 participating…

  6. Cooperate to Validate: OBSERVAL-NET Experts' Report on Validation of Non-Formal and Informal Learning (VNIL) 2013

    Science.gov (United States)

    Weber Guisan, Saskia; Voit, Janine; Lengauer, Sonja; Proinger, Eva; Duvekot, Ruud; Aagaard, Kirsten

    2014-01-01

    The present publication is one of the outcomes of the OBSERVAL-NET project (follow-up of the OBSERVAL project). The main aim of OBSERVAL-NET was to set up a stakeholder-centric network of organisations supporting the validation of non-formal and informal learning in Europe based on the formation of national working groups in the 8 participating…

  7. Knowledge Access in Rural Inter-connected Areas Network ...

    International Development Research Centre (IDRC) Digital Library (Canada)

    Knowledge Access in Rural Inter-connected Areas Network (KariaNet) - Phase II ... the existing network to include two thematic networks on food security and rural ... Woman conquering male business in Yemen : Waleya's micro-enterprise.

  8. MPL-Net Measurements of Aerosol and Cloud Vertical Distributions at Co-Located AERONET Sites

    Science.gov (United States)

    Welton, Ellsworth J.; Campbell, James R.; Berkoff, Timothy A.; Spinhirne, James D.; Tsay, Si-Chee; Holben, Brent; Starr, David OC. (Technical Monitor)

    2002-01-01

    In the early 1990s, the first small, eye-safe, and autonomous lidar system was developed, the Micropulse Lidar (MPL). The MPL acquires signal profiles of backscattered laser light from aerosols and clouds. The signals are analyzed to yield multiple layer heights, optical depths of each layer, average extinction-to-backscatter ratios for each layer, and profiles of extinction in each layer. In 2000, several MPL sites were organized into a coordinated network, called MPL-Net, by the Cloud and Aerosol Lidar Group at NASA Goddard Space Flight Center (GSFC) using funding provided by the NASA Earth Observing System. tn addition to the funding provided by NASA EOS, the NASA CERES Ground Validation Group supplied four MPL systems to the project, and the NASA TOMS group contributed their MPL for work at GSFC. The Atmospheric Radiation Measurement Program (ARM) also agreed to make their data available to the MPL-Net project for processing. In addition to the initial NASA and ARM operated sites, several other independent research groups have also expressed interest in joining the network using their own instruments. Finally, a limited amount of EOS funding was set aside to participate in various field experiments each year. The NASA Sensor Intercomparison and Merger for Biological and Interdisciplinary Oceanic Studies (SIMBIOS) project also provides funds to deploy their MPL during ocean research cruises. All together, the MPL-Net project has participated in four major field experiments since 2000. Most MPL-Net sites and field experiment locations are also co-located with sunphotometers in the NASA Aerosol Robotic Network. (AERONET). Therefore, at these locations data is collected on both aerosol and cloud vertical structure as well as column optical depth and sky radiance. Real-time data products are now available from most MPL-Net sites. Our real-time products are generated at times of AERONET aerosol optical depth (AOD) measurements. The AERONET AOD is used as input to our

  9. The neuro vector engine : flexibility to improve convolutional net efficiency for wearable vision

    NARCIS (Netherlands)

    Peemen, M.C.J.; Shi, R.; Lal, S.; Juurlink, B.H.H.; Mesman, B.; Corporaal, H.

    2016-01-01

    Deep Convolutional Networks (ConvNets) are currently superior in benchmark performance, but the associated demands on computation and data transfer prohibit straightforward mapping on energy constrained wearable platforms. The computational burden can be overcome by dedicated hardware accelerators,

  10. How to construct the statistic network? An association network of herbaceous

    Directory of Open Access Journals (Sweden)

    WenJun Zhang

    2012-06-01

    Full Text Available In present study I defined a new type of network, the statistic network. The statistic network is a weighted and non-deterministic network. In the statistic network, a connection value, i.e., connection weight, represents connection strength and connection likelihood between two nodes and its absolute value falls in the interval (0,1]. The connection value is expressed as a statistical measure such as correlation coefficient, association coefficient, or Jaccard coefficient, etc. In addition, all connections of the statistic network can be statistically tested for their validity. A connection is true if the connection value is statistically significant. If all connection values of a node are not statistically significant, it is an isolated node. An isolated node has not any connection to other nodes in the statistic network. Positive and negative connection values denote distinct connectiontypes (positive or negative association or interaction. In the statistic network, two nodes with the greater connection value will show more similar trend in the change of their states. At any time we can obtain a sample network of the statistic network. A sample network is a non-weighted and deterministic network. Thestatistic network, in particular the plant association network that constructed from field sampling, is mostly an information network. Most of the interspecific relationships in plant community are competition and cooperation. Therefore in comparison to animal networks, the methodology of statistic network is moresuitable to construct plant association networks. Some conclusions were drawn from this study: (1 in the plant association network, most connections are weak and positive interactions. The association network constructed from Spearman rank correlation has most connections and isolated taxa are fewer. From net linear correlation,linear correlation, to Spearman rank correlation, the practical number of connections and connectance in the

  11. Micro-Doppler Feature Extraction and Recognition Based on Netted Radar for Ballistic Targets

    Directory of Open Access Journals (Sweden)

    Feng Cun-qian

    2015-12-01

    Full Text Available This study examines the complexities of using netted radar to recognize and resolve ballistic midcourse targets. The application of micro-motion feature extraction to ballistic mid-course targets is analyzed, and the current status of application and research on micro-motion feature recognition is concluded for singlefunction radar networks such as low- and high-resolution imaging radar networks. Advantages and disadvantages of these networks are discussed with respect to target recognition. Hybrid-mode radar networks combine low- and high-resolution imaging radar and provide a specific reference frequency that is the basis for ballistic target recognition. Main research trends are discussed for hybrid-mode networks that apply micromotion feature extraction to ballistic mid-course targets.

  12. NaNet: a configurable NIC bridging the gap between HPC and real-time HEP GPU computing

    International Nuclear Information System (INIS)

    Lonardo, A.; Ameli, F.; Biagioni, A.; Frezza, O.; Cicero, F. Lo; Martinelli, M.; Paolucci, P.S.; Pastorelli, E.; Simeone, F.; Simula, F.; Tosoratto, L.; Vicini, P.; Ammendola, R.; Ramusino, A. Cotta; Fiorini, M.; Neri, I.; Lamanna, G.; Pontisso, L.; Sozzi, M.; Rossetti, D.

    2015-01-01

    NaNet is a FPGA-based PCIe Network Interface Card (NIC) design with GPUDirect and Remote Direct Memory Access (RDMA) capabilities featuring a configurable and extensible set of network channels. The design currently supports both standard—Gbe (1000BASE-T) and 10GbE (10Base-R)—and custom—34 Gbps APElink and 2.5 Gbps deterministic latency KM3link—channels, but its modularity allows for straightforward inclusion of other link technologies. The GPUDirect feature combined with a transport layer offload module and a data stream processing stage makes NaNet a low-latency NIC suitable for real-time GPU processing. In this paper we describe the NaNet architecture and its performances, exhibiting two of its use cases: the GPU-based low-level trigger for the RICH detector in the NA62 experiment at CERN and the on-/off-shore data transport system for the KM3NeT-IT underwater neutrino telescope

  13. Energy savings through self-backhauling for future heterogeneous networks

    International Nuclear Information System (INIS)

    Faruk, Nasir; Ruttik, Kalle; Mutafungwa, Edward; Jäntti, Riku

    2016-01-01

    Mobile operators face continuous challenge of enhancing network capacity and coverage so as to meet demand for ubiquitous high-speed mobile data connectivity. Unfortunately, these enhancements are typically accompanied by increased burden of network energy consumption. Heterogeneous network (HetNet) deployments of a large number of low power small base stations (SBS) to complement existing macro base stations is an approach that increases network capacity but potentially reduces overall network energy consumption. The SBS backhaul links in HetNets present a significant powering burden. In this paper, we show how self backhauling of SBS can reduce overall network power demand. A backhaul-energy consumption model is developed and used to investigate the energy efficiency of different backhauling options. We note that significant energy savings could be achieved through the use of self-backhauling when compared with the conventional microwave backhauling. The results presented would provide guidelines for energy- and cost-efficient backhaul implementation for future HetNets. - Highlights: • A backhaul-energy consumption model is developed. • Self backhauling of small base stations can reduce overall network power demand. • Energy saving strategy presented would relieved the burden on the power networks. • Results provide guidelines for energy and cost effective backhaul implementation.

  14. A Large Scale Code Resolution Service Network in the Internet of Things

    Science.gov (United States)

    Yu, Haining; Zhang, Hongli; Fang, Binxing; Yu, Xiangzhan

    2012-01-01

    In the Internet of Things a code resolution service provides a discovery mechanism for a requester to obtain the information resources associated with a particular product code immediately. In large scale application scenarios a code resolution service faces some serious issues involving heterogeneity, big data and data ownership. A code resolution service network is required to address these issues. Firstly, a list of requirements for the network architecture and code resolution services is proposed. Secondly, in order to eliminate code resolution conflicts and code resolution overloads, a code structure is presented to create a uniform namespace for code resolution records. Thirdly, we propose a loosely coupled distributed network consisting of heterogeneous, independent; collaborating code resolution services and a SkipNet based code resolution service named SkipNet-OCRS, which not only inherits DHT's advantages, but also supports administrative control and autonomy. For the external behaviors of SkipNet-OCRS, a novel external behavior mode named QRRA mode is proposed to enhance security and reduce requester complexity. For the internal behaviors of SkipNet-OCRS, an improved query algorithm is proposed to increase query efficiency. It is analyzed that integrating SkipNet-OCRS into our resolution service network can meet our proposed requirements. Finally, simulation experiments verify the excellent performance of SkipNet-OCRS. PMID:23202207

  15. A large scale code resolution service network in the Internet of Things.

    Science.gov (United States)

    Yu, Haining; Zhang, Hongli; Fang, Binxing; Yu, Xiangzhan

    2012-11-07

    In the Internet of Things a code resolution service provides a discovery mechanism for a requester to obtain the information resources associated with a particular product code immediately. In large scale application scenarios a code resolution service faces some serious issues involving heterogeneity, big data and data ownership. A code resolution service network is required to address these issues. Firstly, a list of requirements for the network architecture and code resolution services is proposed. Secondly, in order to eliminate code resolution conflicts and code resolution overloads, a code structure is presented to create a uniform namespace for code resolution records. Thirdly, we propose a loosely coupled distributed network consisting of heterogeneous, independent; collaborating code resolution services and a SkipNet based code resolution service named SkipNet-OCRS, which not only inherits DHT’s advantages, but also supports administrative control and autonomy. For the external behaviors of SkipNet-OCRS, a novel external behavior mode named QRRA mode is proposed to enhance security and reduce requester complexity. For the internal behaviors of SkipNet-OCRS, an improved query algorithm is proposed to increase query efficiency. It is analyzed that integrating SkipNet-OCRS into our resolution service network can meet our proposed requirements. Finally, simulation experiments verify the excellent performance of SkipNet-OCRS.

  16. VirHostNet 2.0: surfing on the web of virus/host molecular interactions data.

    Science.gov (United States)

    Guirimand, Thibaut; Delmotte, Stéphane; Navratil, Vincent

    2015-01-01

    VirHostNet release 2.0 (http://virhostnet.prabi.fr) is a knowledgebase dedicated to the network-based exploration of virus-host protein-protein interactions. Since the previous VirhostNet release (2009), a second run of manual curation was performed to annotate the new torrent of high-throughput protein-protein interactions data from the literature. This resource is shared publicly, in PSI-MI TAB 2.5 format, using a PSICQUIC web service. The new interface of VirHostNet 2.0 is based on Cytoscape web library and provides a user-friendly access to the most complete and accurate resource of virus-virus and virus-host protein-protein interactions as well as their projection onto their corresponding host cell protein interaction networks. We hope that the VirHostNet 2.0 system will facilitate systems biology and gene-centered analysis of infectious diseases and will help to identify new molecular targets for antiviral drugs design. This resource will also continue to help worldwide scientists to improve our knowledge on molecular mechanisms involved in the antiviral response mediated by the cell and in the viral strategies selected by viruses to hijack the host immune system. © The Author(s) 2014. Published by Oxford University Press on behalf of Nucleic Acids Research.

  17. Cognitive resource management for heterogeneous cellular networks

    CERN Document Server

    Liu, Yongkang

    2014-01-01

    This Springer Brief focuses on cognitive resource management in heterogeneous cellular networks (Het Net) with small cell deployment for the LTE-Advanced system. It introduces the Het Net features, presents practical approaches using cognitive radio technology in accommodating small cell data relay and optimizing resource allocation and examines the effectiveness of resource management among small cells given limited coordination bandwidth and wireless channel uncertainty. The authors introduce different network characteristics of small cell, investigate the mesh of small cell access points in

  18. A Lesk-inspired Unsupervised Algorithm for Lexical Choice from WordNet Synsets

    NARCIS (Netherlands)

    Basile, Valerio; Basili, Roberto; Lenci, Allesandro; Magnini, Bernardo

    2014-01-01

    The generation of text from abstract meaning representations involves, among other tasks, the production of lexical items for the concepts to realize. Using WordNet as a foundational ontology, we exploit its internal network structure to predict the best lemmas for a given synset without the need

  19. IrisDenseNet: Robust Iris Segmentation Using Densely Connected Fully Convolutional Networks in the Images by Visible Light and Near-Infrared Light Camera Sensors.

    Science.gov (United States)

    Arsalan, Muhammad; Naqvi, Rizwan Ali; Kim, Dong Seop; Nguyen, Phong Ha; Owais, Muhammad; Park, Kang Ryoung

    2018-05-10

    The recent advancements in computer vision have opened new horizons for deploying biometric recognition algorithms in mobile and handheld devices. Similarly, iris recognition is now much needed in unconstraint scenarios with accuracy. These environments make the acquired iris image exhibit occlusion, low resolution, blur, unusual glint, ghost effect, and off-angles. The prevailing segmentation algorithms cannot cope with these constraints. In addition, owing to the unavailability of near-infrared (NIR) light, iris recognition in visible light environment makes the iris segmentation challenging with the noise of visible light. Deep learning with convolutional neural networks (CNN) has brought a considerable breakthrough in various applications. To address the iris segmentation issues in challenging situations by visible light and near-infrared light camera sensors, this paper proposes a densely connected fully convolutional network (IrisDenseNet), which can determine the true iris boundary even with inferior-quality images by using better information gradient flow between the dense blocks. In the experiments conducted, five datasets of visible light and NIR environments were used. For visible light environment, noisy iris challenge evaluation part-II (NICE-II selected from UBIRIS.v2 database) and mobile iris challenge evaluation (MICHE-I) datasets were used. For NIR environment, the institute of automation, Chinese academy of sciences (CASIA) v4.0 interval, CASIA v4.0 distance, and IIT Delhi v1.0 iris datasets were used. Experimental results showed the optimal segmentation of the proposed IrisDenseNet and its excellent performance over existing algorithms for all five datasets.

  20. IrisDenseNet: Robust Iris Segmentation Using Densely Connected Fully Convolutional Networks in the Images by Visible Light and Near-Infrared Light Camera Sensors

    Directory of Open Access Journals (Sweden)

    Muhammad Arsalan

    2018-05-01

    Full Text Available The recent advancements in computer vision have opened new horizons for deploying biometric recognition algorithms in mobile and handheld devices. Similarly, iris recognition is now much needed in unconstraint scenarios with accuracy. These environments make the acquired iris image exhibit occlusion, low resolution, blur, unusual glint, ghost effect, and off-angles. The prevailing segmentation algorithms cannot cope with these constraints. In addition, owing to the unavailability of near-infrared (NIR light, iris recognition in visible light environment makes the iris segmentation challenging with the noise of visible light. Deep learning with convolutional neural networks (CNN has brought a considerable breakthrough in various applications. To address the iris segmentation issues in challenging situations by visible light and near-infrared light camera sensors, this paper proposes a densely connected fully convolutional network (IrisDenseNet, which can determine the true iris boundary even with inferior-quality images by using better information gradient flow between the dense blocks. In the experiments conducted, five datasets of visible light and NIR environments were used. For visible light environment, noisy iris challenge evaluation part-II (NICE-II selected from UBIRIS.v2 database and mobile iris challenge evaluation (MICHE-I datasets were used. For NIR environment, the institute of automation, Chinese academy of sciences (CASIA v4.0 interval, CASIA v4.0 distance, and IIT Delhi v1.0 iris datasets were used. Experimental results showed the optimal segmentation of the proposed IrisDenseNet and its excellent performance over existing algorithms for all five datasets.

  1. Constitution and application of reactor make-up system's fault diagnostic Bayesian networks

    International Nuclear Information System (INIS)

    Liang Jie; Cai Qi; Chu Zhuli; Wang Haiping

    2013-01-01

    A fault diagnostic Bayesian network of reactor make-up system was constituted. The system's structure characters, operation rules and experts' experience were combined and an initial net was built. As the fault date sets were learned with the particle swarm optimization based Bayesian network structure, the structure of diagnostic net was completed and used to inference case. The built net can analyze diagnostic probability of every node in the net and afford assistant decision to fault diagnosis. (authors)

  2. Random a-adic groups and random net fractals

    Energy Technology Data Exchange (ETDEWEB)

    Li Yin [Department of Mathematics, Nanjing University, Nanjing 210093 (China)], E-mail: Lyjerry7788@hotmail.com; Su Weiyi [Department of Mathematics, Nanjing University, Nanjing 210093 (China)], E-mail: suqiu@nju.edu.cn

    2008-08-15

    Based on random a-adic groups, this paper investigates the relationship between the existence conditions of a positive flow in a random network and the estimation of the Hausdorff dimension of a proper random net fractal. Subsequently we describe some particular random fractals for which our results can be applied. Finally the Mauldin and Williams theorem is shown to be very important example for a random Cantor set with application in physics as shown in E-infinity theory.

  3. Particle Tracking and Simulation on the .NET Framework

    International Nuclear Information System (INIS)

    Nishimura, Hiroshi; Scarvie, Tom

    2006-01-01

    Particle tracking and simulation studies are becoming increasingly complex. In addition to the use of more sophisticated graphics, interactive scripting is becoming popular. Compatibility with different control systems requires network and database capabilities. It is not a trivial task to fulfill all the various requirements without sacrificing runtime performance. We evaluated the effectiveness of the .NET framework by converting a C++ simulation code to C. The portability to other platforms is mentioned in terms of Mono

  4. Throughput-Based Traffic Steering in LTE-Advanced HetNet Deployments

    DEFF Research Database (Denmark)

    Gimenez, Lucas Chavarria; Kovacs, Istvan Z.; Wigard, Jeroen

    2015-01-01

    The objective of this paper is to propose traffic steering solutions that aim at optimizing the end-user throughput. Two different implementations of an active mode throughput-based traffic steering algorithm for Heterogeneous Networks (HetNet) are introduced. One that always forces handover of t...... throughput is generally higher, reaching values of 36% and 18% for the medium- and high-load conditions....

  5. Network computing with Einstein@home and climateprediction.net

    CERN Multimedia

    CERN. Geneva; Christensen, Carl; Massey, Neil; Aina, Tolu; Marquina, Miguel Angel

    2005-01-01

    Einstein@Home is a project developed to search data from the Laser Interferometer Gravitational wave Observatory (LIGO) in the US and from the GEO 600 gravitational wave observatory in Germany for signals coming from extremely dense, rapidly rotating stars. Such sources are believed to be either quark stars or neutron stars, and a subclass of these are already observed by conventional means as pulsars or X-ray emitting celestial objects. Einstein@home is an official project of the Year of Physics. 2. climateprediction.net aims to investigate the approximations that have to be made in state-of-the-art climate models by running such models thousands of times under a range of approximations. This will help understand how sensitive different models are to small changes in, for example, the carbon dioxide and the sulphur cycle. This will contribute to exploring how climate may change in the next century under a wide range of different scenarios.

  6. Model-based prototyping of an interoperability protocol for mobile ad-hoc networks

    NARCIS (Netherlands)

    Kristensen, L.M.; Westergaard, M.; Norgaard, P.C.; Romijn, J.; Smith, G.; Pol, van de J.

    2005-01-01

    We present an industrial project conducted at Ericsson Danmark A/S, Telebit where formal methods in the form of Coloured Petri Nets (CP-nets or CPNs) have been used for the specification of an interoperability protocol for routing packets between fixed core networks and mobile ad-hoc networks. The

  7. End-to-end unsupervised deformable image registration with a convolutional neural network

    NARCIS (Netherlands)

    de Vos, Bob D.; Berendsen, Floris; Viergever, Max A.; Staring, Marius; Išgum, Ivana

    2017-01-01

    In this work we propose a deep learning network for deformable image registration (DIRNet). The DIRNet consists of a convolutional neural network (ConvNet) regressor, a spatial transformer, and a resampler. The ConvNet analyzes a pair of fixed and moving images and outputs parameters for the spatial

  8. Emergent intelligent properties of progressively structured pattern recognition nets

    Energy Technology Data Exchange (ETDEWEB)

    Aleksander, I

    1983-07-01

    The n-tuple recognition net is seen as a building brick of a progression of network structures. The emergent intelligent properties of such systems are discussed. They include the amplification of confidence for the recognition of images that differ in small detail, a short term memory of the last seen image, sequence sensitivity, sequence sensitivity, sequence acceptance and saccadic inspection as an aid in scene analysis. 12 references.

  9. VP-Nets : Efficient automatic localization of key brain structures in 3D fetal neurosonography.

    Science.gov (United States)

    Huang, Ruobing; Xie, Weidi; Alison Noble, J

    2018-04-23

    Three-dimensional (3D) fetal neurosonography is used clinically to detect cerebral abnormalities and to assess growth in the developing brain. However, manual identification of key brain structures in 3D ultrasound images requires expertise to perform and even then is tedious. Inspired by how sonographers view and interact with volumes during real-time clinical scanning, we propose an efficient automatic method to simultaneously localize multiple brain structures in 3D fetal neurosonography. The proposed View-based Projection Networks (VP-Nets), uses three view-based Convolutional Neural Networks (CNNs), to simplify 3D localizations by directly predicting 2D projections of the key structures onto three anatomical views. While designed for efficient use of data and GPU memory, the proposed VP-Nets allows for full-resolution 3D prediction. We investigated parameters that influence the performance of VP-Nets, e.g. depth and number of feature channels. Moreover, we demonstrate that the model can pinpoint the structure in 3D space by visualizing the trained VP-Nets, despite only 2D supervision being provided for a single stream during training. For comparison, we implemented two other baseline solutions based on Random Forest and 3D U-Nets. In the reported experiments, VP-Nets consistently outperformed other methods on localization. To test the importance of loss function, two identical models are trained with binary corss-entropy and dice coefficient loss respectively. Our best VP-Net model achieved prediction center deviation: 1.8 ± 1.4 mm, size difference: 1.9 ± 1.5 mm, and 3D Intersection Over Union (IOU): 63.2 ± 14.7% when compared to the ground truth. To make the whole pipeline intervention free, we also implement a skull-stripping tool using 3D CNN, which achieves high segmentation accuracy. As a result, the proposed processing pipeline takes a raw ultrasound brain image as input, and output a skull-stripped image with five detected key brain

  10. Daily variation in net primary production and net calcification in coral reef communities exposed to elevated pCO2

    Directory of Open Access Journals (Sweden)

    S. Comeau

    2017-07-01

    Full Text Available The threat represented by ocean acidification (OA for coral reefs has received considerable attention because of the sensitivity of calcifiers to changing seawater carbonate chemistry. However, most studies have focused on the organismic response of calcification to OA, and only a few have addressed community-level effects, or investigated parameters other than calcification, such as photosynthesis. Light (photosynthetically active radiation, PAR is a driver of biological processes on coral reefs, and the possibility that these processes might be perturbed by OA has important implications for community function. Here we investigate how CO2 enrichment affects the relationships between PAR and community net O2 production (Pnet, and between PAR and community net calcification (Gnet, using experiments on three coral communities constructed to match (i the back reef of Mo'orea, French Polynesia, (ii the fore reef of Mo'orea, and (iii the back reef of O'ahu, Hawaii. The results were used to test the hypothesis that OA affects the relationship between Pnet and Gnet. For the three communities tested, pCO2 did not affect the Pnet–PAR relationship, but it affected the intercept of the hyperbolic tangent curve fitting the Gnet–PAR relationship for both reef communities in Mo'orea (but not in O'ahu. For the three communities, the slopes of the linear relationships between Pnet and Gnet were not affected by OA, although the intercepts were depressed by the inhibitory effect of high pCO2 on Gnet. Our result indicates that OA can modify the balance between net calcification and net photosynthesis of reef communities by depressing community calcification, but without affecting community photosynthesis.

  11. Cluster Formation and Joint Power-Bandwidth Allocation for Imperfect NOMA in DL-HetNets

    KAUST Repository

    Celik, Abdulkadir; Al-Qahtani, Fawaz; Radaydeh, Redha; Alouini, Mohamed-Slim

    2017-01-01

    and estimation errors. Then, a generic cluster formation (CF) and Power-Bandwidth Allocation (PBA) is formulated as a mixed-integer non-linear programming (MINLP) problem for downlink (DL) heterogeneous networks (HetNets). After dividing the MINLP problem

  12. Analytical bounds on the area spectral efficiency of uplink heterogeneous networks over generalized fading channels

    KAUST Repository

    Shakir, Muhammad; Tabassum, Hina; Alouini, Mohamed-Slim

    2014-01-01

    Heterogeneous networks (HetNets) are envisioned to enable next-generation cellular networks by providing higher spectral and energy efficiency. A HetNet is typically composed of multiple radio access technologies where several low-power low

  13. Recent Progress of Seismic Observation Networks in Japan

    Science.gov (United States)

    Okada, Y.

    2013-04-01

    Before the occurrence of disastrous Kobe earthquake in 1995, the number of high sensitivity seismograph stations operated in Japan was nearly 550 and was concentrated in the Kanto and Tokai districts, central Japan. In the wake of the Kobe earthquake, Japanese government has newly established the Headquarters for Earthquake Research Promotion and started the reconstruction of seismic networks to evenly cover the whole Japan. The basic network is composed of three seismographs, i.e. high sensitivity seismograph (Hi-net), broadband seismograph (F-net), and strong motion seismograph (K-NET). A large majority of Hi-net stations are also equipped with a pair of strong motion sensors at the bottom of borehole and the ground surface (KiK-net). A plenty of high quality data obtained from these networks are circulated at once and is producing several new seismological findings as well as providing the basis for the Earthquake Early Warning system. In March 11, 2011, "Off the Pacific coast of Tohoku Earthquake" was generated with magnitude 9.0, which records the largest in the history of seismic observation in Japan. The greatest disaster on record was brought by huge tsunami with nearly 20 thousand killed or missing people. We are again noticed that seismic observation system is quite poor in the oceanic region compared to the richness of it in the inland region. In 2012, NIED has started the construction of ocean bottom seismic and tsunami observation network along the Japan Trench. It is planned to layout 154 stations with an average spacing of 30km, each of which is equipped with an accelerometer for seismic observation and a water pressure gauge for tsunami observation. We are expecting that more rapid and accurate warning of earthquake and tsunami becomes possible by this observing network.

  14. Recent Progress of Seismic Observation Networks in Japan

    International Nuclear Information System (INIS)

    Okada, Y

    2013-01-01

    Before the occurrence of disastrous Kobe earthquake in 1995, the number of high sensitivity seismograph stations operated in Japan was nearly 550 and was concentrated in the Kanto and Tokai districts, central Japan. In the wake of the Kobe earthquake, Japanese government has newly established the Headquarters for Earthquake Research Promotion and started the reconstruction of seismic networks to evenly cover the whole Japan. The basic network is composed of three seismographs, i.e. high sensitivity seismograph (Hi-net), broadband seismograph (F-net), and strong motion seismograph (K-NET). A large majority of Hi-net stations are also equipped with a pair of strong motion sensors at the bottom of borehole and the ground surface (KiK-net). A plenty of high quality data obtained from these networks are circulated at once and is producing several new seismological findings as well as providing the basis for the Earthquake Early Warning system. In March 11, 2011, 'Off the Pacific coast of Tohoku Earthquake' was generated with magnitude 9.0, which records the largest in the history of seismic observation in Japan. The greatest disaster on record was brought by huge tsunami with nearly 20 thousand killed or missing people. We are again noticed that seismic observation system is quite poor in the oceanic region compared to the richness of it in the inland region. In 2012, NIED has started the construction of ocean bottom seismic and tsunami observation network along the Japan Trench. It is planned to layout 154 stations with an average spacing of 30km, each of which is equipped with an accelerometer for seismic observation and a water pressure gauge for tsunami observation. We are expecting that more rapid and accurate warning of earthquake and tsunami becomes possible by this observing network.

  15. Nuclear technology databases and information network systems

    International Nuclear Information System (INIS)

    Iwata, Shuichi; Kikuchi, Yasuyuki; Minakuchi, Satoshi

    1993-01-01

    This paper describes the databases related to nuclear (science) technology, and information network. Following contents are collected in this paper: the database developed by JAERI, ENERGY NET, ATOM NET, NUCLEN nuclear information database, INIS, NUclear Code Information Service (NUCLIS), Social Application of Nuclear Technology Accumulation project (SANTA), Nuclear Information Database/Communication System (NICS), reactor materials database, radiation effects database, NucNet European nuclear information database, reactor dismantling database. (J.P.N.)

  16. A Large Scale Code Resolution Service Network in the Internet of Things

    Directory of Open Access Journals (Sweden)

    Xiangzhan Yu

    2012-11-01

    Full Text Available In the Internet of Things a code resolution service provides a discovery mechanism for a requester to obtain the information resources associated with a particular product code immediately. In large scale application scenarios a code resolution service faces some serious issues involving heterogeneity, big data and data ownership. A code resolution service network is required to address these issues. Firstly, a list of requirements for the network architecture and code resolution services is proposed. Secondly, in order to eliminate code resolution conflicts and code resolution overloads, a code structure is presented to create a uniform namespace for code resolution records. Thirdly, we propose a loosely coupled distributed network consisting of heterogeneous, independent; collaborating code resolution services and a SkipNet based code resolution service named SkipNet-OCRS, which not only inherits DHT’s advantages, but also supports administrative control and autonomy. For the external behaviors of SkipNet-OCRS, a novel external behavior mode named QRRA mode is proposed to enhance security and reduce requester complexity. For the internal behaviors of SkipNet-OCRS, an improved query algorithm is proposed to increase query efficiency. It is analyzed that integrating SkipNet-OCRS into our resolution service network can meet our proposed requirements. Finally, simulation experiments verify the excellent performance of SkipNet-OCRS.

  17. Net Neutrality

    DEFF Research Database (Denmark)

    Savin, Andrej

    2017-01-01

    Repealing “net neutrality” in the US will have no bearing on Internet freedom or security there or anywhere else.......Repealing “net neutrality” in the US will have no bearing on Internet freedom or security there or anywhere else....

  18. Annotating Coloured Petri Nets

    DEFF Research Database (Denmark)

    Lindstrøm, Bo; Wells, Lisa Marie

    2002-01-01

    Coloured Petri nets (CP-nets) can be used for several fundamentally different purposes like functional analysis, performance analysis, and visualisation. To be able to use the corresponding tool extensions and libraries it is sometimes necessary to include extra auxiliary information in the CP......-net. An example of such auxiliary information is a counter which is associated with a token to be able to do performance analysis. Modifying colour sets and arc inscriptions in a CP-net to support a specific use may lead to creation of several slightly different CP-nets – only to support the different uses...... of the same basic CP-net. One solution to this problem is that the auxiliary information is not integrated into colour sets and arc inscriptions of a CP-net, but is kept separately. This makes it easy to disable this auxiliary information if a CP-net is to be used for another purpose. This paper proposes...

  19. Net benefits: assessing the effectiveness of clinical networks in Australia through qualitative methods.

    Science.gov (United States)

    Cunningham, Frances C; Ranmuthugala, Geetha; Westbrook, Johanna I; Braithwaite, Jeffrey

    2012-11-02

    In the 21st century, government and industry are supplementing hierarchical, bureaucratic forms of organization with network forms, compatible with principles of devolved governance and decentralization of services. Clinical networks are employed as a key health policy approach to engage clinicians in improving patient care in Australia. With significant investment in such networks in Australia and internationally, it is important to assess their effectiveness and sustainability as implementation mechanisms. In two purposively selected, musculoskeletal clinical networks, members and stakeholders were interviewed to ascertain their perceptions regarding key factors relating to network effectiveness and sustainability. We adopted a three-level approach to evaluating network effectiveness: at the community, network, and member levels, across the network lifecycle. Both networks studied are advisory networks displaying characteristics of the 'enclave' type of non-hierarchical network. They are hybrids of the mandated and natural network forms. In the short term, at member level, both networks were striving to create connectivity and collaboration of members. Over the short to medium term, at network level, both networks applied multi-disciplinary engagement in successfully developing models of care as key outputs, and disseminating information to stakeholders. In the long term, at both community and network levels, stakeholders would measure effectiveness by the broader statewide influence of the network in changing and improving practice. At community level, in the long term, stakeholders acknowledged both networks had raised the profile, and provided a 'voice' for musculoskeletal conditions, evidencing some progress with implementation of the network mission while pursuing additional implementation strategies. This research sheds light on stakeholders' perceptions of assessing clinical network effectiveness at community, network, and member levels during the network

  20. Small cell networks deployment, management, and optimization

    CERN Document Server

    Claussen, Holger; Ho, Lester; Razavi, Rouzbeh; Kucera, Stepan

    2018-01-01

    Small Cell Networks: Deployment, Management, and Optimization addresses key problems of the cellular network evolution towards HetNets. It focuses on the latest developments in heterogeneous and small cell networks, as well as their deployment, operation, and maintenance. It also covers the full spectrum of the topic, from academic, research, and business to the practice of HetNets in a coherent manner. Additionally, it provides complete and practical guidelines to vendors and operators interested in deploying small cells. The first comprehensive book written by well-known researchers and engineers from Nokia Bell Labs, Small Cell Networks begins with an introduction to the subject--offering chapters on capacity scaling and key requirements of future networks. It then moves on to sections on coverage and capacity optimization, and interference management. From there, the book covers mobility management, energy efficiency, and small cell deployment, ending with a section devoted to future trends and applicat...

  1. The capacity, capabilities and needs of the who BioDoseNet member laboratories

    International Nuclear Information System (INIS)

    Maznyk, N. A.; Wilkins, R. C.; Carr, Z.; Lloyd, D. C.

    2012-01-01

    Bio-dosimetry is an essential tool for providing timely assessments of radiation exposure, particularly when physical dosimetry is unavailable or unreliable. For mass-casualty events involving public exposure to ionising radiation, it is paramount to rapidly provide this dose information for medical management of casualties. The dicentric chromosome assay is currently the most reliable accepted method for bio-dosimetry; however, in a mass-casualty scenario, the throughput of this assay will be challenged by its time-consuming nature and the specific expertise required. To address this limitation, many countries have established expertise in cytogenetic bio-dosimetry and started developing surge capabilities through setting up regional networks to deal with emergency situations. To capitalise on this growing expertise and organise it into an internationally coordinated laboratory network, the World Health Organization has created and launched a global bio-dosimetry network (BioDoseNet). In order to determine the existing capacity of BioDoseNet member laboratories, including their expertise and in vivo experience, involvement in national and international activities, problems, needs and prospects, an in-depth survey was conducted. These survey results provide significant information on the current state of emergency cytogenetic bio-dosimetry capabilities around the world. (authors)

  2. Net benefits: assessing the effectiveness of clinical networks in Australia through qualitative methods

    Directory of Open Access Journals (Sweden)

    Cunningham Frances C

    2012-11-01

    Full Text Available Abstract Background In the 21st century, government and industry are supplementing hierarchical, bureaucratic forms of organization with network forms, compatible with principles of devolved governance and decentralization of services. Clinical networks are employed as a key health policy approach to engage clinicians in improving patient care in Australia. With significant investment in such networks in Australia and internationally, it is important to assess their effectiveness and sustainability as implementation mechanisms. Methods In two purposively selected, musculoskeletal clinical networks, members and stakeholders were interviewed to ascertain their perceptions regarding key factors relating to network effectiveness and sustainability. We adopted a three-level approach to evaluating network effectiveness: at the community, network, and member levels, across the network lifecycle. Results Both networks studied are advisory networks displaying characteristics of the ‘enclave’ type of non-hierarchical network. They are hybrids of the mandated and natural network forms. In the short term, at member level, both networks were striving to create connectivity and collaboration of members. Over the short to medium term, at network level, both networks applied multi-disciplinary engagement in successfully developing models of care as key outputs, and disseminating information to stakeholders. In the long term, at both community and network levels, stakeholders would measure effectiveness by the broader statewide influence of the network in changing and improving practice. At community level, in the long term, stakeholders acknowledged both networks had raised the profile, and provided a ‘voice’ for musculoskeletal conditions, evidencing some progress with implementation of the network mission while pursuing additional implementation strategies. Conclusions This research sheds light on stakeholders’ perceptions of assessing clinical

  3. Determinants of household demand for bed nets in a rural area of southern Mozambique.

    Science.gov (United States)

    Chase, Claire; Sicuri, Elisa; Sacoor, Charfudin; Nhalungo, Delino; Nhacolo, Ariel; Alonso, Pedro L; Menéndez, Clara

    2009-06-15

    A key to making insecticide-treated nets (ITNs) a long-term, sustainable solution to the spread of malaria is understanding what drives their purchase and use. Few studies have analysed the determinants of demand for bed nets for malaria prevention at the household level, and in particular, how demand for nets compares with demand for other mosquito prevention methods. This study uses a household survey to assess the determinants of demand for bed nets in an area of endemic malaria transmission in rural, southern Mozambique. The study looks at willingness to pay (WTP) for bed nets, net ownership, usage, and past purchase behaviour, alongside expenditure and frequency of use of alternate methods for malaria prevention. While overall net ownership in the sample is low, the evidence fails to suggest that poorer households are less likely to own bed nets, when controlling for covariates, nor does the likelihood of receiving a free net depend on socioeconomic status (SES). Formal schooling and market knowledge seem to indicate higher average willingness to pay, while use of alternate methods for malaria prevention, and receipt of Indoor Residual Spraying (IRS) are found to decrease demand for bed nets. For long-term sustainability of ITNs to be realized, results suggest that either full or partial subsidies may be necessary in some contexts to encourage households to obtain and use nets. Given the possible substitution effects of combined malaria control interventions, and the danger of not taking into consideration household preferences for malaria prevention, successful malaria control campaigns should invest a portion of their funds towards educating recipients of IRS and users of other preventive methods on the importance of net use even in the absence of mosquitoes.

  4. Determinants of household demand for bed nets in a rural area of southern Mozambique

    Directory of Open Access Journals (Sweden)

    Nhacolo Ariel

    2009-06-01

    Full Text Available Abstract Background A key to making insecticide-treated nets (ITNs a long-term, sustainable solution to the spread of malaria is understanding what drives their purchase and use. Few studies have analysed the determinants of demand for bed nets for malaria prevention at the household level, and in particular, how demand for nets compares with demand for other mosquito prevention methods. Methods This study uses a household survey to assess the determinants of demand for bed nets in an area of endemic malaria transmission in rural, southern Mozambique. The study looks at willingness to pay (WTP for bed nets, net ownership, usage, and past purchase behaviour, alongside expenditure and frequency of use of alternate methods for malaria prevention. Results While overall net ownership in the sample is low, the evidence fails to suggest that poorer households are less likely to own bed nets, when controlling for covariates, nor does the likelihood of receiving a free net depend on socioeconomic status (SES. Formal schooling and market knowledge seem to indicate higher average willingness to pay, while use of alternate methods for malaria prevention, and receipt of Indoor Residual Spraying (IRS are found to decrease demand for bed nets. Conclusion For long-term sustainability of ITNs to be realized, results suggest that either full or partial subsidies may be necessary in some contexts to encourage households to obtain and use nets. Given the possible substitution effects of combined malaria control interventions, and the danger of not taking into consideration household preferences for malaria prevention, successful malaria control campaigns should invest a portion of their funds towards educating recipients of IRS and users of other preventive methods on the importance of net use even in the absence of mosquitoes.

  5. SEMANTIC3D.NET: a New Large-Scale Point Cloud Classification Benchmark

    Science.gov (United States)

    Hackel, T.; Savinov, N.; Ladicky, L.; Wegner, J. D.; Schindler, K.; Pollefeys, M.

    2017-05-01

    This paper presents a new 3D point cloud classification benchmark data set with over four billion manually labelled points, meant as input for data-hungry (deep) learning methods. We also discuss first submissions to the benchmark that use deep convolutional neural networks (CNNs) as a work horse, which already show remarkable performance improvements over state-of-the-art. CNNs have become the de-facto standard for many tasks in computer vision and machine learning like semantic segmentation or object detection in images, but have no yet led to a true breakthrough for 3D point cloud labelling tasks due to lack of training data. With the massive data set presented in this paper, we aim at closing this data gap to help unleash the full potential of deep learning methods for 3D labelling tasks. Our semantic3D.net data set consists of dense point clouds acquired with static terrestrial laser scanners. It contains 8 semantic classes and covers a wide range of urban outdoor scenes: churches, streets, railroad tracks, squares, villages, soccer fields and castles. We describe our labelling interface and show that our data set provides more dense and complete point clouds with much higher overall number of labelled points compared to those already available to the research community. We further provide baseline method descriptions and comparison between methods submitted to our online system. We hope semantic3D.net will pave the way for deep learning methods in 3D point cloud labelling to learn richer, more general 3D representations, and first submissions after only a few months indicate that this might indeed be the case.

  6. Frontal Parietal Control Network Regulates the Anti-Correlated Default and Dorsal Attention Networks

    OpenAIRE

    Gao, Wei; Lin, Weili

    2011-01-01

    Recent reports demonstrate the anti-correlated behaviors between the default and the dorsal attention (DA) networks. We aimed to investigate the roles of the frontal parietal control (FPC) network in regulating the two anti-correlated networks through three experimental conditions, including resting, continuous self-paced/attended sequential finger tapping (FT), and natural movie watching (MW), respectively. The two goal-directed tasks were chosen to engage either one of the two competing net...

  7. Throughput vs. Delay in Lossy Wireless Mesh Networks with Random Linear Network Coding

    OpenAIRE

    Hundebøll, Martin; Pahlevani, Peyman; Roetter, Daniel Enrique Lucani; Fitzek, Frank

    2014-01-01

    This work proposes a new protocol applying on–the–fly random linear network coding in wireless mesh net-works. The protocol provides increased reliability, low delay,and high throughput to the upper layers, while being obliviousto their specific requirements. This seemingly conflicting goalsare achieved by design, using an on–the–fly network codingstrategy. Our protocol also exploits relay nodes to increasethe overall performance of individual links. Since our protocolnaturally masks random p...

  8. InvertNet: a new paradigm for digital access to invertebrate collections

    Directory of Open Access Journals (Sweden)

    Chris Dietrich

    2012-07-01

    Full Text Available InvertNet, one of the three Thematic Collection Networks (TCNs funded in the first round of the U.S. National Science Foundation’s Advancing Digitization of Biological Collections (ADBC program, is tasked with providing digital access to ~60 million specimens housed in 22 arthropod (primarily insect collections at institutions distributed throughout the upper midwestern USA. The traditional workflow for insect collection digitization involves manually keying information from specimen labels into a database and attaching a unique identifier label to each specimen. This remains the dominant paradigm, despite some recent attempts to automate various steps in the process using more advanced technologies. InvertNet aims to develop improved semi-automated, high-throughput workflows for digitizing and providing access to invertebrate collections that balance the need for speed and cost-effectiveness with long-term preservation of specimens and accuracy of data capture. The proposed workflows build on recent methods for digitizing and providing access to high-quality images of multiple specimens (e.g., entire drawers of pinned insects simultaneously. Limitations of previous approaches are discussed and possible solutions are proposed that incorporate advanced imaging and 3-D reconstruction technologies. InvertNet couples efficient digitization workflows with a highly robust network infrastructure capable of managing massive amounts of image data and related metadata and delivering high-quality images, including interactive 3-D reconstructions in real time via the Internet.

  9. A DAQ system for CAMAC controller CC/NET using DAQ-Middleware

    International Nuclear Information System (INIS)

    Inoue, E; Yasu, Y; Nakayoshi, K; Sendai, H

    2010-01-01

    DAQ-Middleware is a framework for the DAQ system which is based on RT-Middleware (Robot Technology Middleware) and dedicated to making DAQ systems. DAQ-Middleware has come into use as a one of the DAQ system framework for the next generation Particle Physics experiment at KEK in recent years. DAQ-Middleware comprises DAQ-Components with all necessary basic functions of the DAQ and is easily extensible. So, using DAQ-Middleware, you are able to construct easily your own DAQ system by combining these components. As an example, we have developed a DAQ system for a CC/NET [1] using DAQ-Middleware by the addition of GUI part and CAMAC readout part. The CC/NET, the CAMAC controller was developed to accomplish high speed read-out of CAMAC data. The basic design concept of CC/NET is to realize data taking through networks. So, it is consistent with the DAQ-Middleware concept. We show how it is convenient to use DAQ-Middleware.

  10. Designing clinical trials to address the needs of childhood and adult asthma: the National Heart, Lung, and Blood Institute's AsthmaNet.

    Science.gov (United States)

    Sutherland, E Rand; Busse, William W

    2014-01-01

    In 2008, the National Heart, Lung, and Blood Institute announced its intent to support a new asthma network known as AsthmaNet. This clinical trials consortium, now in its fifth year, has been charged with developing and executing clinical trials to address the most important asthma management questions and identify new treatment approaches in pediatric and adult patients. This review will discuss the organization of AsthmaNet and the scientific context in which the network was developed and began its work, report the results of an internal priority-setting exercise designed to guide the network's scientific strategy, and highlight the portfolio of clinical trials, proof-of-concept studies, and mechanistic studies planned for the 7-year period of the network to update the global asthma community regarding the progress and processes of the network. Copyright © 2013 American Academy of Allergy, Asthma & Immunology. Published by Mosby, Inc. All rights reserved.

  11. Learning Visual Basic NET

    CERN Document Server

    Liberty, Jesse

    2009-01-01

    Learning Visual Basic .NET is a complete introduction to VB.NET and object-oriented programming. By using hundreds of examples, this book demonstrates how to develop various kinds of applications--including those that work with databases--and web services. Learning Visual Basic .NET will help you build a solid foundation in .NET.

  12. Harnessing diversity towards the reconstructing of large scale gene regulatory networks.

    Directory of Open Access Journals (Sweden)

    Takeshi Hase

    Full Text Available Elucidating gene regulatory network (GRN from large scale experimental data remains a central challenge in systems biology. Recently, numerous techniques, particularly consensus driven approaches combining different algorithms, have become a potentially promising strategy to infer accurate GRNs. Here, we develop a novel consensus inference algorithm, TopkNet that can integrate multiple algorithms to infer GRNs. Comprehensive performance benchmarking on a cloud computing framework demonstrated that (i a simple strategy to combine many algorithms does not always lead to performance improvement compared to the cost of consensus and (ii TopkNet integrating only high-performance algorithms provide significant performance improvement compared to the best individual algorithms and community prediction. These results suggest that a priori determination of high-performance algorithms is a key to reconstruct an unknown regulatory network. Similarity among gene-expression datasets can be useful to determine potential optimal algorithms for reconstruction of unknown regulatory networks, i.e., if expression-data associated with known regulatory network is similar to that with unknown regulatory network, optimal algorithms determined for the known regulatory network can be repurposed to infer the unknown regulatory network. Based on this observation, we developed a quantitative measure of similarity among gene-expression datasets and demonstrated that, if similarity between the two expression datasets is high, TopkNet integrating algorithms that are optimal for known dataset perform well on the unknown dataset. The consensus framework, TopkNet, together with the similarity measure proposed in this study provides a powerful strategy towards harnessing the wisdom of the crowds in reconstruction of unknown regulatory networks.

  13. Developing Personal Network Business Models

    DEFF Research Database (Denmark)

    Saugstrup, Dan; Henten, Anders

    2006-01-01

    The aim of the paper is to examine the issue of business modeling in relation to personal networks, PNs. The paper builds on research performed on business models in the EU 1ST MAGNET1 project (My personal Adaptive Global NET). The paper presents the Personal Network concept and briefly reports...

  14. Feasibility study of networks. Progress report, July 15, 1975--July 14, 1976

    International Nuclear Information System (INIS)

    Campbell, E.J.; Kannel, M.; Saffran, K.

    1976-01-01

    The Laboratory for Nuclear Science has continued its study into the feasibility of networks, changing the focus of the investigation from the possible ways of collaborating with the MIT Information Processing Center in implementing a connection to the ARPA net to a wider consideration of the implications of computer resource sharing via networks. This report describes experiments performed on the ARPA net in collaboration with the Lawrence Berkeley Laboratory and experiments in more conventional forms of remote job entry to that site and others in ERDA. It discusses the use of the Multics mail as set up for ERDA, comparing it to other mail systems. Plans for future experiments in the ARPA net and for investigation of networks other than the ARPA net are proposed. The conclusion was reached that resource sharing via networks is both feasible and desirable provided certain interface problems are solved. Recommendations are made for more investigation into the human factors involved in network use, methods of providing consulting help to users, and determination of the most cost effective use of remote resource sharing. For the Laboratory for Nuclear Science, it is concluded that access to other ERDA computers via networks will meet some of our computing needs now and more in the future. However, remote resource sharing can be used only to supplement the on site computer, not replace it. At the present time, the best method of accessing the ARPA net for our users is via the MIT Multics System. However, as a permanent solution, a mini-host located in our computer center may provide more capability. In the next year, we plan to work out methods of attacking the problems of interfacing to the ARPA net and to use it in a limited manner for actual production work

  15. Feasibility study of networks. Progress report, July 15, 1975--July 14, 1976

    Energy Technology Data Exchange (ETDEWEB)

    Campbell, E.J.; Kannel, M.; Saffran, K.

    1976-04-30

    The Laboratory for Nuclear Science has continued its study into the feasibility of networks, changing the focus of the investigation from the possible ways of collaborating with the MIT Information Processing Center in implementing a connection to the ARPA net to a wider consideration of the implications of computer resource sharing via networks. This report describes experiments performed on the ARPA net in collaboration with the Lawrence Berkeley Laboratory and experiments in more conventional forms of remote job entry to that site and others in ERDA. It discusses the use of the Multics mail as set up for ERDA, comparing it to other mail systems. Plans for future experiments in the ARPA net and for investigation of networks other than the ARPA net are proposed. The conclusion was reached that resource sharing via networks is both feasible and desirable provided certain interface problems are solved. Recommendations are made for more investigation into the human factors involved in network use, methods of providing consulting help to users, and determination of the most cost effective use of remote resource sharing. For the Laboratory for Nuclear Science, it is concluded that access to other ERDA computers via networks will meet some of our computing needs now and more in the future. However, remote resource sharing can be used only to supplement the on site computer, not replace it. At the present time, the best method of accessing the ARPA net for our users is via the MIT Multics System. However, as a permanent solution, a mini-host located in our computer center may provide more capability. In the next year, we plan to work out methods of attacking the problems of interfacing to the ARPA net and to use it in a limited manner for actual production work.

  16. Application of Looped Network Analysis Method to Core of Prismatic VHTR

    International Nuclear Information System (INIS)

    Lee, Jeong-Hun; Cho, Hyoung-Kyu; Park, Goon-Cherl

    2016-01-01

    Most of reactor coolant flows through the coolant channel within the fuel block, but some portion of the reactor coolant bypasses to the interstitial gaps. The vertical gap and horizontal gap are called bypass gap and cross gap, respectively as shown in Fig. 1. CFD simulation for the full core of VHTR might be possible but it requires vast computational cost and time. Moreover, it is hard to cover whole cases corresponding to the various bypass gap distribution in the whole VHTR core. In order to solve this problem, in this study, the flow network analysis code, FastNet (Flow Analysis for Steady-state Network), was developed using the Looped Network Analysis Method. The applied method was validated by comparing with SNU VHTR multi-block experiment. A 3-demensional network modeling was conducted representing flow paths as flow resistances. Flow network analysis code, FastNet, was developed to evaluate the core bypass flow distribution by using looped network analysis method. Complex flow network could be solved simply by converting the non-linear momentum equation to the linearized equation. The FastNet code predicted the flow distribution of the SNU multi-block experiment accurately

  17. L-GRAAL: Lagrangian graphlet-based network aligner.

    Science.gov (United States)

    Malod-Dognin, Noël; Pržulj, Nataša

    2015-07-01

    Discovering and understanding patterns in networks of protein-protein interactions (PPIs) is a central problem in systems biology. Alignments between these networks aid functional understanding as they uncover important information, such as evolutionary conserved pathways, protein complexes and functional orthologs. A few methods have been proposed for global PPI network alignments, but because of NP-completeness of underlying sub-graph isomorphism problem, producing topologically and biologically accurate alignments remains a challenge. We introduce a novel global network alignment tool, Lagrangian GRAphlet-based ALigner (L-GRAAL), which directly optimizes both the protein and the interaction functional conservations, using a novel alignment search heuristic based on integer programming and Lagrangian relaxation. We compare L-GRAAL with the state-of-the-art network aligners on the largest available PPI networks from BioGRID and observe that L-GRAAL uncovers the largest common sub-graphs between the networks, as measured by edge-correctness and symmetric sub-structures scores, which allow transferring more functional information across networks. We assess the biological quality of the protein mappings using the semantic similarity of their Gene Ontology annotations and observe that L-GRAAL best uncovers functionally conserved proteins. Furthermore, we introduce for the first time a measure of the semantic similarity of the mapped interactions and show that L-GRAAL also uncovers best functionally conserved interactions. In addition, we illustrate on the PPI networks of baker's yeast and human the ability of L-GRAAL to predict new PPIs. Finally, L-GRAAL's results are the first to show that topological information is more important than sequence information for uncovering functionally conserved interactions. L-GRAAL is coded in C++. Software is available at: http://bio-nets.doc.ic.ac.uk/L-GRAAL/. n.malod-dognin@imperial.ac.uk Supplementary data are available at

  18. Reconciling uncertain costs and benefits in bayes nets for invasive species management

    Science.gov (United States)

    Burgman, M.A.; Wintle, B.A.; Thompson, C.A.; Moilanen, A.; Runge, M.C.; Ben-Haim, Y.

    2010-01-01

    Bayes nets are used increasingly to characterize environmental systems and formalize probabilistic reasoning to support decision making. These networks treat probabilities as exact quantities. Sensitivity analysis can be used to evaluate the importance of assumptions and parameter estimates. Here, we outline an application of info-gap theory to Bayes nets that evaluates the sensitivity of decisions to possibly large errors in the underlying probability estimates and utilities. We apply it to an example of management and eradication of Red Imported Fire Ants in Southern Queensland, Australia and show how changes in management decisions can be justified when uncertainty is considered. ?? 2009 Society for Risk Analysis.

  19. Composability-Centered Convolutional Neural Network Pruning

    Energy Technology Data Exchange (ETDEWEB)

    Shen, Xipeng [North Carolina State University; Guan, Hui [North Carolina State University; Lim, Seung-Hwan [ORNL; Patton, Robert M. [ORNL

    2018-02-01

    This work studies the composability of the building blocks ofstructural CNN models (e.g., GoogleLeNet and Residual Networks) in thecontext of network pruning. We empirically validate that a networkcomposed of pre-trained building blocks (e.g. residual blocks andInception modules) not only gives a better initial setting fortraining, but also allows the training process to converge at asignificantly higher accuracy in much less time. Based on thatinsight, we propose a {\\em composability-centered} design for CNNnetwork pruning. Experiments show that this new scheme shortens theconfiguration process in CNN network pruning by up to 186.8X forResNet-50 and up to 30.2X for Inception-V3, and meanwhile, the modelsit finds that meet the accuracy requirement are significantly morecompact than those found by default schemes.

  20. Pro-Nets versus No-Nets: Differences in Urban Older Adults' Predilections for Internet Use

    Science.gov (United States)

    Cresci, M. Kay; Yarandi, Hossein N.; Morrell, Roger W.

    2010-01-01

    Enthusiasm for information technology (IT) is growing among older adults. Many older adults enjoy IT and the Internet (Pro-Nets), but others have no desire to use it (No-Nets). This study found that Pro-Nets and No-Nets were different on a number of variables that might predict IT use. No-Nets were older, had less education and income, were…

  1. Integrated topology optimisation of multi-energy networks

    NARCIS (Netherlands)

    Mazairac, L.A.J.; Salenbien, R.; Vanhoudt, D.; Desmedt, J.; Vries, de B.

    2015-01-01

    Multi-carrier hybrid energy distribution net- works provide flexibility in case of network malfunctions, energy shortages and price fluctuations through energy conversion and storage. Therefore hybrid networks can cope with large-scale integration of distributed and intermittent renewable energy

  2. Joint NetWork Reconfiguration and Capacitor Placement by Bactrial Foraging Algorithm

    Directory of Open Access Journals (Sweden)

    Mohammad Ali Mohammadnia

    2011-01-01

    Full Text Available Power system engineers are forced to place more emphasis on reducing losses at the distribution level. From an economic perspective, Joint network reconfiguration and capacitor placement is one of the best ways to save energy. Application of heuristic technique is unavoidable, because of expansion of distribution networks and becoming more complex connections in these grids. In view of this, for the first this paper investigates the ability of Bacterial Foraging Algorithm (BFA for Joint network reconfiguration and capacitor placement.

  3. A Configurable Event-Driven Convolutional Node with Rate Saturation Mechanism for Modular ConvNet Systems Implementation

    Science.gov (United States)

    Camuñas-Mesa, Luis A.; Domínguez-Cordero, Yaisel L.; Linares-Barranco, Alejandro; Serrano-Gotarredona, Teresa; Linares-Barranco, Bernabé

    2018-01-01

    Convolutional Neural Networks (ConvNets) are a particular type of neural network often used for many applications like image recognition, video analysis or natural language processing. They are inspired by the human brain, following a specific organization of the connectivity pattern between layers of neurons known as receptive field. These networks have been traditionally implemented in software, but they are becoming more computationally expensive as they scale up, having limitations for real-time processing of high-speed stimuli. On the other hand, hardware implementations show difficulties to be used for different applications, due to their reduced flexibility. In this paper, we propose a fully configurable event-driven convolutional node with rate saturation mechanism that can be used to implement arbitrary ConvNets on FPGAs. This node includes a convolutional processing unit and a routing element which allows to build large 2D arrays where any multilayer structure can be implemented. The rate saturation mechanism emulates the refractory behavior in biological neurons, guaranteeing a minimum separation in time between consecutive events. A 4-layer ConvNet with 22 convolutional nodes trained for poker card symbol recognition has been implemented in a Spartan6 FPGA. This network has been tested with a stimulus where 40 poker cards were observed by a Dynamic Vision Sensor (DVS) in 1 s time. Different slow-down factors were applied to characterize the behavior of the system for high speed processing. For slow stimulus play-back, a 96% recognition rate is obtained with a power consumption of 0.85 mW. At maximum play-back speed, a traffic control mechanism downsamples the input stimulus, obtaining a recognition rate above 63% when less than 20% of the input events are processed, demonstrating the robustness of the network. PMID:29515349

  4. A Configurable Event-Driven Convolutional Node with Rate Saturation Mechanism for Modular ConvNet Systems Implementation

    Directory of Open Access Journals (Sweden)

    Luis A. Camuñas-Mesa

    2018-02-01

    Full Text Available Convolutional Neural Networks (ConvNets are a particular type of neural network often used for many applications like image recognition, video analysis or natural language processing. They are inspired by the human brain, following a specific organization of the connectivity pattern between layers of neurons known as receptive field. These networks have been traditionally implemented in software, but they are becoming more computationally expensive as they scale up, having limitations for real-time processing of high-speed stimuli. On the other hand, hardware implementations show difficulties to be used for different applications, due to their reduced flexibility. In this paper, we propose a fully configurable event-driven convolutional node with rate saturation mechanism that can be used to implement arbitrary ConvNets on FPGAs. This node includes a convolutional processing unit and a routing element which allows to build large 2D arrays where any multilayer structure can be implemented. The rate saturation mechanism emulates the refractory behavior in biological neurons, guaranteeing a minimum separation in time between consecutive events. A 4-layer ConvNet with 22 convolutional nodes trained for poker card symbol recognition has been implemented in a Spartan6 FPGA. This network has been tested with a stimulus where 40 poker cards were observed by a Dynamic Vision Sensor (DVS in 1 s time. Different slow-down factors were applied to characterize the behavior of the system for high speed processing. For slow stimulus play-back, a 96% recognition rate is obtained with a power consumption of 0.85 mW. At maximum play-back speed, a traffic control mechanism downsamples the input stimulus, obtaining a recognition rate above 63% when less than 20% of the input events are processed, demonstrating the robustness of the network.

  5. A Configurable Event-Driven Convolutional Node with Rate Saturation Mechanism for Modular ConvNet Systems Implementation.

    Science.gov (United States)

    Camuñas-Mesa, Luis A; Domínguez-Cordero, Yaisel L; Linares-Barranco, Alejandro; Serrano-Gotarredona, Teresa; Linares-Barranco, Bernabé

    2018-01-01

    Convolutional Neural Networks (ConvNets) are a particular type of neural network often used for many applications like image recognition, video analysis or natural language processing. They are inspired by the human brain, following a specific organization of the connectivity pattern between layers of neurons known as receptive field. These networks have been traditionally implemented in software, but they are becoming more computationally expensive as they scale up, having limitations for real-time processing of high-speed stimuli. On the other hand, hardware implementations show difficulties to be used for different applications, due to their reduced flexibility. In this paper, we propose a fully configurable event-driven convolutional node with rate saturation mechanism that can be used to implement arbitrary ConvNets on FPGAs. This node includes a convolutional processing unit and a routing element which allows to build large 2D arrays where any multilayer structure can be implemented. The rate saturation mechanism emulates the refractory behavior in biological neurons, guaranteeing a minimum separation in time between consecutive events. A 4-layer ConvNet with 22 convolutional nodes trained for poker card symbol recognition has been implemented in a Spartan6 FPGA. This network has been tested with a stimulus where 40 poker cards were observed by a Dynamic Vision Sensor (DVS) in 1 s time. Different slow-down factors were applied to characterize the behavior of the system for high speed processing. For slow stimulus play-back, a 96% recognition rate is obtained with a power consumption of 0.85 mW. At maximum play-back speed, a traffic control mechanism downsamples the input stimulus, obtaining a recognition rate above 63% when less than 20% of the input events are processed, demonstrating the robustness of the network.

  6. Experiments and simulation of a net closing mechanism for tether-net capture of space debris

    Science.gov (United States)

    Sharf, Inna; Thomsen, Benjamin; Botta, Eleonora M.; Misra, Arun K.

    2017-10-01

    This research addresses the design and testing of a debris containment system for use in a tether-net approach to space debris removal. The tether-net active debris removal involves the ejection of a net from a spacecraft by applying impulses to masses on the net, subsequent expansion of the net, the envelopment and capture of the debris target, and the de-orbiting of the debris via a tether to the chaser spacecraft. To ensure a debris removal mission's success, it is important that the debris be successfully captured and then, secured within the net. To this end, we present a concept for a net closing mechanism, which we believe will permit consistently successful debris capture via a simple and unobtrusive design. This net closing system functions by extending the main tether connecting the chaser spacecraft and the net vertex to the perimeter and around the perimeter of the net, allowing the tether to actuate closure of the net in a manner similar to a cinch cord. A particular embodiment of the design in a laboratory test-bed is described: the test-bed itself is comprised of a scaled-down tether-net, a supporting frame and a mock-up debris. Experiments conducted with the facility demonstrate the practicality of the net closing system. A model of the net closure concept has been integrated into the previously developed dynamics simulator of the chaser/tether-net/debris system. Simulations under tether tensioning conditions demonstrate the effectiveness of the closure concept for debris containment, in the gravity-free environment of space, for a realistic debris target. The on-ground experimental test-bed is also used to showcase its utility for validating the dynamics simulation of the net deployment, and a full-scale automated setup would make possible a range of validation studies of other aspects of a tether-net debris capture mission.

  7. Knowledge Access in Rural Inter-connected Areas Network ...

    International Development Research Centre (IDRC) Digital Library (Canada)

    Knowledge Access in Rural Inter-connected Areas Network (KariaNet) - Phase II ... poor by sharing innovations, best practices and indigenous knowledge using ... A third thematic network - on knowledge management strategies - will play an ...

  8. Automatic slice identification in 3D medical images with a ConvNet regressor

    NARCIS (Netherlands)

    de Vos, Bob D.; Viergever, Max A.; de Jong, Pim A.; Išgum, Ivana

    2016-01-01

    Identification of anatomical regions of interest is a prerequisite in many medical image analysis tasks. We propose a method that automatically identifies a slice of interest (SOI) in 3D images with a convolutional neural network (ConvNet) regressor. In 150 chest CT scans two reference slices were

  9. Catalyst study for the decontamination of atmospheres containing few traces of tritium

    International Nuclear Information System (INIS)

    Chabot, J.; Montel, J.; Sannier, J.

    1988-01-01

    The conversion of tritium at very low activity level using catalytic oxidation followed by water trapping is studied in the loop BEATRICE in order to measure kinetic parameters required for the design of the NET tritium clean-up system. Two precious-metal catalysts (Pd/alumina and Pt/alumina) are very efficient in removing tritium from contaminated gas mixtures down to a few MPC level at low temperatures, without need of isotopic swamping. However at room temperature, the trapping of tritium species on the catalyst surface gives rise to a progressive deactivation with time. Best regeneration conditions have to be determined in order to demonstrate industrial feasibility of operating at low temperatures

  10. Processing horizontal networks measured by integrated terrestrial and GPS technologies

    Directory of Open Access Journals (Sweden)

    Vincent Jakub

    2003-09-01

    Full Text Available Local horizontal networks in which GPS and terrestrial measurements (TER are done are often established at present. Iin other networks, the previous terrestrial measurements can be completed with quantities from contemporary GPS observations (tunnel nets, mining nets with surface and underground parts and other long-shaped nets.The processing of such heterobeneous (GPS, TER networks whose terrestrial measurements are performed as point coordinate measurements (∆X, ∆Y using (geodetic total stationIn is presented in this paper. In such network structures it is then available:- the values ∆X, ∆Y from TER observations which are transformed in the plane of S-JTSK for adjustement,- the values ∆X, ∆Y in the plane S-JTSK that can be obtained by 3D transformation of WGS84 netpoint coordinates from GPS observations to corresponding coordinates S-JTSK.For common adjusting all the ∆X, ∆Y, some elements of the network geometry (e.g. distances should be measured by both methods (GPS, TER. This approach makes possible an effective homogenisation of both network parts what is equivalent to saying that an expressive influence reduction on local frame realizations of S-JTSK in the whole network can be made.Results of network processing obtained in proposed manner are acceptable in general and they are equivalent (accuracy, reliability to results of another processing methods.

  11. Multiple-Ring Digital Communication Network

    Science.gov (United States)

    Kirkham, Harold

    1992-01-01

    Optical-fiber digital communication network to support data-acquisition and control functions of electric-power-distribution networks. Optical-fiber links of communication network follow power-distribution routes. Since fiber crosses open power switches, communication network includes multiple interconnected loops with occasional spurs. At each intersection node is needed. Nodes of communication network include power-distribution substations and power-controlling units. In addition to serving data acquisition and control functions, each node acts as repeater, passing on messages to next node(s). Multiple-ring communication network operates on new AbNET protocol and features fiber-optic communication.

  12. ENERGY AWARE NETWORK: BAYESIAN BELIEF NETWORKS BASED DECISION MANAGEMENT SYSTEM

    Directory of Open Access Journals (Sweden)

    Santosh Kumar Chaudhari

    2011-06-01

    Full Text Available A Network Management System (NMS plays a very important role in managing an ever-evolving telecommunication network. Generally an NMS monitors & maintains the health of network elements. The growing size of the network warrants extra functionalities from the NMS. An NMS provides all kinds of information about networks which can be used for other purposes apart from monitoring & maintaining networks like improving QoS & saving energy in the network. In this paper, we add another dimension to NMS services, namely, making an NMS energy aware. We propose a Decision Management System (DMS framework which uses a machine learning technique called Bayesian Belief Networks (BBN, to make the NMS energy aware. The DMS is capable of analysing and making control decisions based on network traffic. We factor in the cost of rerouting and power saving per port. Simulations are performed on standard network topologies, namely, ARPANet and IndiaNet. It is found that ~2.5-6.5% power can be saved.

  13. Application of neural networks to seismic active control

    International Nuclear Information System (INIS)

    Tang, Yu.

    1995-01-01

    An exploratory study on seismic active control using an artificial neural network (ANN) is presented in which a singledegree-of-freedom (SDF) structural system is controlled by a trained neural network. A feed-forward neural network and the backpropagation training method are used in the study. In backpropagation training, the learning rate is determined by ensuring the decrease of the error function at each training cycle. The training patterns for the neural net are generated randomly. Then, the trained ANN is used to compute the control force according to the control algorithm. The control strategy proposed herein is to apply the control force at every time step to destroy the build-up of the system response. The ground motions considered in the simulations are the N21E and N69W components of the Lake Hughes No. 12 record that occurred in the San Fernando Valley in California on February 9, 1971. Significant reduction of the structural response by one order of magnitude is observed. Also, it is shown that the proposed control strategy has the ability to reduce the peak that occurs during the first few cycles of the time history. These promising results assert the potential of applying ANNs to active structural control under seismic loads

  14. MetBaro - Pressure Instrument for Mars MetNet Lander

    Science.gov (United States)

    Polkko, J.; Haukka, H.; Harri, A.-M.; Schmidt, W.; Leinonen, J.; Mäkinen, T.

    2009-04-01

    THE METNET MISSION FOCUSED ON THE Martian atmospheric science is based on a new semihard landing vehicle called the MetNet Lander (MNL). The MNL will have a versatile science payload focused on the atmospheric science of Mars. The scientific payload of the MetNet Mission encompasses separate instrument packages for the atmospheric entry and descent phase and for the surface operation phase. MetBaro is the pressure instrument of MetNet Lander designed to work on Martian surface. It is based on Barocap® technology developed by Vaisala, Inc. MetBaro is a capacitic type of sensing device where capasitor plates are moved by ambient pressure. MetBaro device consists of two pressure transducers including a total of 6 Barocap® sensor heads of high-stability and high-resolution types. The long-term stability of MetBaro is in order of 20…50 µBar and resolution a few µBar. MetBaro is small, lightweighed and has low power consumption. It weighs about 50g without wires and controlling FPGA, and consumes 15 mW of power. A similar device has successfully flown in Phoenix mission, where it performed months of measurements on Martian ground. Another device is also part of the Mars Science Laboratory REMS instrument (to be launched in 2011).

  15. Autonomous Information Unit for Fine-Grain Data Access Control and Information Protection in a Net-Centric System

    Science.gov (United States)

    Chow, Edward T.; Woo, Simon S.; James, Mark; Paloulian, George K.

    2012-01-01

    As communication and networking technologies advance, networks will become highly complex and heterogeneous, interconnecting different network domains. There is a need to provide user authentication and data protection in order to further facilitate critical mission operations, especially in the tactical and mission-critical net-centric networking environment. The Autonomous Information Unit (AIU) technology was designed to provide the fine-grain data access and user control in a net-centric system-testing environment to meet these objectives. The AIU is a fundamental capability designed to enable fine-grain data access and user control in the cross-domain networking environments, where an AIU is composed of the mission data, metadata, and policy. An AIU provides a mechanism to establish trust among deployed AIUs based on recombining shared secrets, authentication and verify users with a username, X.509 certificate, enclave information, and classification level. AIU achieves data protection through (1) splitting data into multiple information pieces using the Shamir's secret sharing algorithm, (2) encrypting each individual information piece using military-grade AES-256 encryption, and (3) randomizing the position of the encrypted data based on the unbiased and memory efficient in-place Fisher-Yates shuffle method. Therefore, it becomes virtually impossible for attackers to compromise data since attackers need to obtain all distributed information as well as the encryption key and the random seeds to properly arrange the data. In addition, since policy can be associated with data in the AIU, different user access and data control strategies can be included. The AIU technology can greatly enhance information assurance and security management in the bandwidth-limited and ad hoc net-centric environments. In addition, AIU technology can be applicable to general complex network domains and applications where distributed user authentication and data protection are

  16. The Community Health Applied Research Network (CHARN) Data Warehouse: a Resource for Patient-Centered Outcomes Research and Quality Improvement in Underserved, Safety Net Populations.

    Science.gov (United States)

    Laws, Reesa; Gillespie, Suzanne; Puro, Jon; Van Rompaey, Stephan; Quach, Thu; Carroll, Joseph; Weir, Rosy Chang; Crawford, Phil; Grasso, Chris; Kaleba, Erin; McBurnie, Mary Ann

    2014-01-01

    The Community Health Applied Research Network, funded by the Health Resources and Services Administration, is a research network comprising 18 Community Health Centers organized into four Research Nodes (each including an academic partner) and a data coordinating center. The network represents more than 500,000 diverse safety net patients across 11 states. The primary objective of this paper is to describe the development and implementation process of the CHARN data warehouse. The methods involved regulatory and governance development and approval, development of content and structure of the warehouse and processes for extracting the data locally, performing validation, and finally submitting data to the data coordinating center. Version 1 of the warehouse has been developed. Tables have been added, the population and the years of electronic health records (EHR) have been expanded for Version 2. It is feasible to create a national, centralized data warehouse with multiple Community Health Center partners using different EHR systems. It is essential to allow sufficient time: (1) to develop collaborative, trusting relationships among new partners with varied technology, backgrounds, expertise, and interests; (2) to complete institutional, business, and regulatory review processes; (3) to identify and address technical challenges associated with diverse data environments, practices, and resources; and (4) to provide continuing data quality assessments to ensure data accuracy.

  17. OpenFlow Extensions for Programmable Quantum Networks

    Science.gov (United States)

    2017-06-19

    Introduction 1 2. Background 1 2.1 Quantum Networks 2 2.2 Software -Defined Networks 3 3. Approach 3 3.1 Metadata 4 3.2 Switch 4 3.3 Controller 5... software -defined networks . Stanford (CA): Stanford University HotNets; 2010. 9. Raychev N. Algorithm for switching 4-bit packages in full quantum...applications to communicate. Advances in network protocols and architectures have led to the development of software -defined programmable networks

  18. The Calibration Units of the KM3NeT neutrino telescope

    Science.gov (United States)

    Baret, B.; Keller, P.; Clark, M. Lindsey

    2016-04-01

    KM3NeT is a network of deep-sea neutrino telescopes to be deployed in the Mediterranean Sea that will perform neutrino astronomy and oscillation studies. It consists of three-dimensional arrays of thousands of optical modules that detect the Cherenkov light induced by charged particles resulting from the interaction of a neutrino with the surrounding medium. The performance of the neutrino telescope relies on the precise timing and positioning calibration of the detector elements. Other environmental conditions which may affect light and sound transmission, such as water temperature and salinity, must also be continuously monitored. This contribution describes the technical design of the first Calibration Unit, to be deployed on the French site as part of KM3NeT Phase 1.

  19. Net profit flow per country from 1980 to 2009: The long-term effects of foreign direct investment.

    Science.gov (United States)

    Akkermans, Dirk H M

    2017-01-01

    The paper aims at describing and explaining net profit flows per country for the period 1980-2009. Net profit flows result from Foreign Direct Investment (FDI) stock and profit repatriation: inward stock creating a profit outflow and outward FDI stock a profit inflow. Profit flows, especially 'normal' ones are not commonly researched. According to world-system theory, countries are part of a system characterised by a core, semi-periphery and periphery, as shown by network analyses of trade relations. Network analyses based on ownership relations of TransNational Corporations (TNCs) show that the top 50 firms that control about 40% of the world economy are almost exclusively located in core countries. So, we may expect a hierarchy in net profit flows with core countries on top and the periphery at the bottom. FDI outflows from the core countries especially rose in the 1990s, so we may expect that the difference has grown in time. A dataset on 'net profit flow' per country is developed. There are diverging developments in net profit flows since the 1980s, as expected: ever more positive for core countries, negative and ever lower for semi-peripheral and peripheral countries, in particular from the 1990s onwards. A fixed effects quantile regression using publicly available data confirms the prediction that peripheral countries share a unique characteristic: their outward investments do not have a positive influence on net profit flow as is the case with semi-peripheral and core countries. The most probable explanation is that peripheral outward investments are indirectly owned by firms located in core and semi-peripheral countries, so all peripheral profit inflows end up in those countries.

  20. ROOT.NET: Using ROOT from .NET languages like C# and F#

    Science.gov (United States)

    Watts, G.

    2012-12-01

    ROOT.NET provides an interface between Microsoft's Common Language Runtime (CLR) and .NET technology and the ubiquitous particle physics analysis tool, ROOT. ROOT.NET automatically generates a series of efficient wrappers around the ROOT API. Unlike pyROOT, these wrappers are statically typed and so are highly efficient as compared to the Python wrappers. The connection to .NET means that one gains access to the full series of languages developed for the CLR including functional languages like F# (based on OCaml). Many features that make ROOT objects work well in the .NET world are added (properties, IEnumerable interface, LINQ compatibility, etc.). Dynamic languages based on the CLR can be used as well, of course (Python, for example). Additionally it is now possible to access ROOT objects that are unknown to the translation tool. This poster will describe the techniques used to effect this translation, along with performance comparisons, and examples. All described source code is posted on the open source site CodePlex.

  1. ROOT.NET: Using ROOT from .NET languages like C and F

    International Nuclear Information System (INIS)

    Watts, G

    2012-01-01

    ROOT.NET provides an interface between Microsoft's Common Language Runtime (CLR) and .NET technology and the ubiquitous particle physics analysis tool, ROOT. ROOT.NET automatically generates a series of efficient wrappers around the ROOT API. Unlike pyROOT, these wrappers are statically typed and so are highly efficient as compared to the Python wrappers. The connection to .NET means that one gains access to the full series of languages developed for the CLR including functional languages like F (based on OCaml). Many features that make ROOT objects work well in the .NET world are added (properties, IEnumerable interface, LINQ compatibility, etc.). Dynamic languages based on the CLR can be used as well, of course (Python, for example). Additionally it is now possible to access ROOT objects that are unknown to the translation tool. This poster will describe the techniques used to effect this translation, along with performance comparisons, and examples. All described source code is posted on the open source site CodePlex.

  2. Hairy Graphenes: Wrapping Nanocellulose Nets around Graphene Oxide Sheets.

    Science.gov (United States)

    Xiong, Rui; Kim, Ho Shin; Korolovych, Volodymyr F; Zhang, Shuaidi; Yingling, Yaroslava; Tsukruk, Vladimir V

    2018-04-17

    Constructing advanced functional nanomaterials with pre-designed organized morphologies from low-dimension synthetic and biological components is extremely challenging because of complex inter-component interactions, high-aspect ratios, flexible shapes, crumpling instabilities and limited common wet-chemistry processing conditions. Herein, we report an efficient and universal amphiphilicity-driven assembly strategy to construct "hairy" flexible hybrid nanosheets with the net of 1D cellulose nanofibers (CNFs) conformally wrapped around 2D graphene oxide (GO) monolayers. This interface-driven bio-synthetic assembly is facilitated by variable amphiphilic interfacial balance via tailoring the surface chemistry of flexible GO sheets as controllably pre-oxidized 2D template cores, resulting in individual sheets tightly surrounded by dense conformal nanocellulose network. These nanocellulose-net wrapped GO nanosheets demonstrate extremely high compressive elastic modulus above 180 GPa due to the strong bonding between nanofibers and GO sheets and arrest of the buckling events. This unique mechanical stability far exceeds the compressive instability limits of both individual components, 1D cellulose nanofibers and 2D graphene monolayers. Additionally, the presence of CNF reinforced nanocellulose network significantly enhances the wetting ability of initial hydrophobic reduced GO nanosheets, enabling the long-term stability of CNFs-rGO dispersion and allowing fast water transport combined with high filtration efficiency for CNFs-rGO membranes. © 2018 WILEY-VCH Verlag GmbH & Co. KGaA, Weinheim.

  3. Control of 12-Cylinder Camless Engine with Neural Networks

    OpenAIRE

    Ashhab Moh’d Sami

    2017-01-01

    The 12-cyliner camless engine breathing process is modeled with artificial neural networks (ANN’s). The inputs to the net are the intake valve lift (IVL) and intake valve closing timing (IVC) whereas the output of the net is the cylinder air charge (CAC). The ANN is trained with data collected from an engine simulation model which is based on thermodynamics principles and calibrated against real engine data. A method for adapting single-output feed-forward neural networks is proposed and appl...

  4. Measuring Cloud Service Health Using NetFlow/IPFIX

    DEFF Research Database (Denmark)

    Drago, Idilio; Hofstede, Rick; Sadre, Ramin

    2015-01-01

    The increasing trend of outsourcing services to cloud providers is changing the way computing power is delivered to enterprises and end users. Although cloud services offer several advantages, they also make cloud consumers strongly dependent on providers. Hence, consumers have a vital interest...... to be immediately informed about any problems in their services. This paper aims at a first step toward a network-based approach to monitor cloud services. We focus on severe problems that affect most services, such as outages or extreme server overload, and propose a method to monitor these problems that relies...... solely on the traffic exchanged between users and cloud providers. Our proposal is entirely based on NetFlow/IPFIX data and, therefore, explicitly targets high-speed networks. By combining a methodology to reassemble and classify flow records with stochastic estimations, our proposal has the distinct...

  5. Development of the neural net technique for particle physics. Study of the e+e- → Z0 → γH reaction

    International Nuclear Information System (INIS)

    Guicheney, C.

    1992-01-01

    This study is concerned with the application of pattern recognition methods through neural networks to High Energy physics. Two methods, Hopfield nets and multilayer nets, are analyzed and shown to have high potential for (resp.) clusterization and classification. Hopfield nets are used for the recognition of jets occurring during the fragmentation process of the e + e - reaction. Multilayer nets are used for the whole reaction analysis. Impediments are pointed out. Associated background noise is also examined. Multilayer nets may enhance the signal to noise ratio when looking for an upper limit for the production of a Higgs boson in the expected canal, and allow for the specific study of the γ b anti b

  6. (Net)Working out: social capital in a private health club.

    Science.gov (United States)

    Crossley, Nick

    2008-09-01

    In Bowling Alone Robert Putnam considers the possibility that the growth of private health clubs and the rising rates of membership to such clubs might represent a counter-trend to his thesis on the decline in social capital. In this paper I explore this idea using ethnographic data and social network analysis. I show both that and how networks form in health clubs and I discuss the ways in which these networks constitute social capital for their members. In addition, however, I explore the 'dark side' of this form of social capital. I argue that high integration amongst some members of a fitness class can generate a power differential between those members and other, less integrated members who experience this negatively. Furthermore, with an eye on Burt's (2005) important thesis on brokerage and closure, I argue that brokerage between relatively closed clusters of agents can lead to inter-group rivalry and conflict, which, in turn, is experienced negatively by those involved.

  7. Access, interest, and attitudes toward electronic communication for health care among patients in the medical safety net.

    Science.gov (United States)

    Schickedanz, Adam; Huang, David; Lopez, Andrea; Cheung, Edna; Lyles, C R; Bodenheimer, Tom; Sarkar, Urmimala

    2013-07-01

    Electronic and internet-based tools for patient-provider communication are becoming the standard of care, but disparities exist in their adoption among patients. The reasons for these disparities are unclear, and few studies have looked at the potential communication technologies have to benefit vulnerable patient populations. To characterize access to, interest in, and attitudes toward internet-based communication in an ethnically, economically, and linguistically diverse group of patients from a large urban safety net clinic network. Observational, cross-sectional study Adult patients (≥ 18 years) in six resource-limited community clinics in the San Francisco Department of Public Health (SFDPH) MAIN MEASURES: Current email use, interest in communicating electronically with health care professionals, barriers to and facilitators of electronic health-related communication, and demographic data-all self-reported via survey. Sixty percent of patients used email, 71 % were interested in using electronic communication with health care providers, and 19 % reported currently using email informally with these providers for health care. Those already using any email were more likely to express interest in using it for health matters. Most patients agreed electronic communication would improve clinic efficiency and overall communication with clinicians. A significant majority of safety net patients currently use email, text messaging, and the internet, and they expressed an interest in using these tools for electronic communication with their medical providers. This interest is currently unmet within safety net clinics that do not offer a patient portal or secure messaging. Tools such as email encounters and electronic patient portals should be implemented and supported to a greater extent in resource-poor settings, but this will require tailoring these tools to patients' language, literacy level, and experience with communication technology.

  8. FloorNet: Deployment and Evaluation of a Multihop Wireless 802.11 Testbed

    Directory of Open Access Journals (Sweden)

    Zink Michael

    2010-01-01

    Full Text Available A lot of attention has been given to multihop wireless networks lately, but further research—in particular, through experimentation—is needed. This attention has motivated an increase in the number of 802.11-based deployments, both indoor and outdoor. These testbeds, which require a significant amount of resources during both deployment and maintenance, are used to run measurements in order to analyze and understand the limitation and differences between analytical or simulation-based figures and the results from real-life experimentation. This paper makes two major contributions: (i first, we describe a novel wireless multihop testbed, which we name FloorNet, that is deployed and operated under the false floor of a lab in our Computer Science building. This false floor provides a strong physical protection that prevents disconnections or misplacements, as well as radio shielding (to some extent thanks to the false floor panels—this later feature is assessed through experimentation; (ii second, by running exhaustive and controlled experiments we are able to analyze the performance limits of commercial off-the-shelf hardware, as well as to derive practical design criteria for the deployment and configuration of mesh networks. These results both provide valuable insights of wireless multihop performance and prove that FloorNet constitutes a valuable asset to research on wireless mesh networks.

  9. TosNet: An easy-to-use, real-time communications protocol for modular, distributed robot controllers

    DEFF Research Database (Denmark)

    Falsig, Simon; Sørensen, Anders Stengaard

    2009-01-01

    Net supports up to 15 nodes, with cycle-rates up to 25 kHz, depending on the configuration. The protocol stack is completely specified as VHDL code, implemented in an FPGA. The physical layer is implemented with Toslink fiberoptic links, offering a compact, robust and highly available link technology......This paper presents the TosNet network, created for robotics research, education, and prototyping, emphasizing ease of use, robustness, compactness, flexibility and fast hard realtime response, to allow distribution of all levels of the robot control system. The current implementation of Tos...

  10. A Game Theoretic Framework for Green HetNets Using D2D Traffic Offload and Renewable Energy Powered Base Stations

    KAUST Repository

    Yaacoub, Elias

    2015-08-26

    This chapter investigates the interplay between cooperative device-to-device (D2D) communications and green communications in LTE heterogeneous networks (HetNets). Two game theoretic concepts are studied and analyzed in order to perform dynamic HetNet base station (BS) on/off switching. The first approach is a coalition-based method whereas the second is based on the Nash bargaining solution. Afterwards, a method for coupling the BS on/off switching approach with D2D collaborative communications is presented and shown to lead to increased energy efficiency. The savings are additionally increased when a portion of the small cell BSs in a HetNet are powered by renewable energy sources. Different utility functions, modeling the game theoretic framework governing the energy consumption balance between the cellular network and the mobile terminals (MTs), are proposed and compared, and their impact on MT quality of service (QoS) is analyzed.

  11. A Game Theoretic Framework for Green HetNets Using D2D Traffic Offload and Renewable Energy Powered Base Stations

    KAUST Repository

    Yaacoub, Elias; Ghazzai, Hakim; Alouini, Mohamed-Slim

    2015-01-01

    This chapter investigates the interplay between cooperative device-to-device (D2D) communications and green communications in LTE heterogeneous networks (HetNets). Two game theoretic concepts are studied and analyzed in order to perform dynamic HetNet base station (BS) on/off switching. The first approach is a coalition-based method whereas the second is based on the Nash bargaining solution. Afterwards, a method for coupling the BS on/off switching approach with D2D collaborative communications is presented and shown to lead to increased energy efficiency. The savings are additionally increased when a portion of the small cell BSs in a HetNet are powered by renewable energy sources. Different utility functions, modeling the game theoretic framework governing the energy consumption balance between the cellular network and the mobile terminals (MTs), are proposed and compared, and their impact on MT quality of service (QoS) is analyzed.

  12. Ground Monitoring Neotropical Dry Forests: A Sensor Network for Forest and Microclimate Dynamics in Semi-Arid Environments (Enviro-Net°)

    Science.gov (United States)

    Rankine, C. J.; Sánchez-Azofeifa, G.

    2011-12-01

    In the face of unprecedented global change driven by anthropogenic pressure on natural systems it has become imperative to monitor and better understand potential shifts in ecosystem functioning and services from local to global scales. The utilization of automated sensors technologies offers numerous advantages over traditional on-site ecosystem surveying techniques and, as a result, sensor networks are becoming a powerful tool in environmental monitoring programs. Tropical forests, renowned for their biodiversity, are important regulators of land-atmosphere fluxes yet the seasonally dry tropical forests, which account for 40% of forested ecosystems in the American tropics, have been severely degraded over the past several decades and not much is known of their capacity to recover. With less than 1% of these forests protected, our ability to monitor the dynamics and quantify changes in the remaining primary and recovering secondary tropical dry forests is vital to understanding mechanisms of ecosystem stress responses and climate feedback with respect to annual productivity and desertification processes in the tropics. The remote sensing component of the Tropi-Dry: Human and Biophysical Dimensions of Tropical Dry Forests in the Americas research network supports a network of long-term tropical ecosystem monitoring platforms which focus on the dynamics of seasonally dry tropical forests in the Americas. With over 25 sensor station deployments operating across a latitudinal gradient in Mexico, Costa Rica, Brazil, and Argentina continuously collecting hyper-temporal sensory input based on standardized deployment parameters, this monitoring system is unique among tropical environments. Technologies used in the network include optical canopy phenology towers, understory wireless sensing networks, above and below ground microclimate stations, and digital cameras. Sensory data streams are uploaded to a cyber-infrastructure initiative, denominated Enviro-Net°, for data

  13. INMARSAT-C SafetyNET

    Science.gov (United States)

    Tsunamis 406 EPIRB's National Weather Service Marine Forecasts INMARSAT-C SafetyNET Marine Forecast Offices greater danger near shore or any shallow waters? NATIONAL WEATHER SERVICE PRODUCTS VIA INMARSAT-C SafetyNET Inmarsat-C SafetyNET is an internationally adopted, automated satellite system for promulgating

  14. Quantum net dynamics

    International Nuclear Information System (INIS)

    Finkelstein, D.

    1989-01-01

    The quantum net unifies the basic principles of quantum theory and relativity in a quantum spacetime having no ultraviolet infinities, supporting the Dirac equation, and having the usual vacuum as a quantum condensation. A correspondence principle connects nets to Schwinger sources and further unifies the vertical structure of the theory, so that the functions of the many hierarchic levels of quantum field theory (predicate algebra, set theory, topology,hor-ellipsis, quantum dynamics) are served by one in quantum net dynamics

  15. High-level Petri Nets

    DEFF Research Database (Denmark)

    various journals and collections. As a result, much of this knowledge is not readily available to people who may be interested in using high-level nets. Within the Petri net community this problem has been discussed many times, and as an outcome this book has been compiled. The book contains reprints...... of some of the most important papers on the application and theory of high-level Petri nets. In this way it makes the relevant literature more available. It is our hope that the book will be a useful source of information and that, e.g., it can be used in the organization of Petri net courses. To make......High-level Petri nets are now widely used in both theoretical analysis and practical modelling of concurrent systems. The main reason for the success of this class of net models is that they make it possible to obtain much more succinct and manageable descriptions than can be obtained by means...

  16. Combining structure, governance and context : A configurational approach to network effectiveness

    NARCIS (Netherlands)

    Raab, J.; Mannak, R.S.; Cambré, B.

    2015-01-01

    This study explores the way in which network structure (network integration), network context (resource munificence and stability), and network governance mode relate to net -work effectiveness. The model by Provan and Milward (Provan, Keith G., and H. Brinton Milward. 1995. A preliminary theory of

  17. Breaking the excitation-inhibition balance makes the cortical network’s space-time dynamics distinguish simple visual scenes

    DEFF Research Database (Denmark)

    Roland, Per E.; Bonde, Lars H.; Forsberg, Lars E.

    2017-01-01

    Brain dynamics are often taken to be temporal dynamics of spiking and membrane potentials in a balanced network. Almost all evidence for a balanced network comes from recordings of cell bodies of few single neurons, neglecting more than 99% of the cortical network. We examined the space......-time dynamics of excitation and inhibition simultaneously in dendrites and axons over four visual areas of ferrets exposed to visual scenes with stationary and moving objects. The visual stimuli broke the tight balance between excitation and inhibition such that the network exhibited longer episodes of net...... excitation subsequently balanced by net inhibition, in contrast to a balanced network. Locally in all four areas the amount of net inhibition matched the amount of net excitation with a delay of 125 ms. The space-time dynamics of excitation-inhibition evolved to reduce the complexity of neuron interactions...

  18. Graph Theoretical Analysis of Network Centric Operations Using Multi-Layer Models

    National Research Council Canada - National Science Library

    Wong-Jiru, Ann

    2006-01-01

    .... The research incorporates the importance of understanding network topology for evaluating an environment for net-centricity and using network characteristics to help commanders assess the effects...

  19. ReSeg: A Recurrent Neural Network-Based Model for Semantic Segmentation

    OpenAIRE

    Visin, Francesco; Ciccone, Marco; Romero, Adriana; Kastner, Kyle; Cho, Kyunghyun; Bengio, Yoshua; Matteucci, Matteo; Courville, Aaron

    2015-01-01

    We propose a structured prediction architecture, which exploits the local generic features extracted by Convolutional Neural Networks and the capacity of Recurrent Neural Networks (RNN) to retrieve distant dependencies. The proposed architecture, called ReSeg, is based on the recently introduced ReNet model for image classification. We modify and extend it to perform the more challenging task of semantic segmentation. Each ReNet layer is composed of four RNN that sweep the image horizontally ...

  20. Planning of nets

    International Nuclear Information System (INIS)

    Carberry, M

    1996-01-01

    The paper is about the planning of nets in areas of low density like it is the case of the rural areas. The author includes economic and technological aspects, planning of nets, demands and management among others

  1. Mobility enhancements for LTE-Advanced Multilayer Networks with Inter-Site Carrier Aggregation

    DEFF Research Database (Denmark)

    Pedersen, Klaus I.; Michaelsen, Per Henrik; Rosa, Claudio

    2013-01-01

    In this article we first summarize some of the most recent HetNet mobility studies for LTE-Advanced, and use these to highlight the challenges that should be further addressed in theresearch community. A state-of-the-art HetNet scenario with macros and small cells deployed on different carriers...... decide small cell addition, removal, and change without any explicit signaling of Measurement events to the network or any signaling of hand-over commands from the network. Hence, the proposed solution effectively offloads the network from having to perform frequent small cell handoff decisions...

  2. Programming NET Web Services

    CERN Document Server

    Ferrara, Alex

    2007-01-01

    Web services are poised to become a key technology for a wide range of Internet-enabled applications, spanning everything from straight B2B systems to mobile devices and proprietary in-house software. While there are several tools and platforms that can be used for building web services, developers are finding a powerful tool in Microsoft's .NET Framework and Visual Studio .NET. Designed from scratch to support the development of web services, the .NET Framework simplifies the process--programmers find that tasks that took an hour using the SOAP Toolkit take just minutes. Programming .NET

  3. Inferring the conservative causal core of gene regulatory networks

    Directory of Open Access Journals (Sweden)

    Emmert-Streib Frank

    2010-09-01

    Full Text Available Abstract Background Inferring gene regulatory networks from large-scale expression data is an important problem that received much attention in recent years. These networks have the potential to gain insights into causal molecular interactions of biological processes. Hence, from a methodological point of view, reliable estimation methods based on observational data are needed to approach this problem practically. Results In this paper, we introduce a novel gene regulatory network inference (GRNI algorithm, called C3NET. We compare C3NET with four well known methods, ARACNE, CLR, MRNET and RN, conducting in-depth numerical ensemble simulations and demonstrate also for biological expression data from E. coli that C3NET performs consistently better than the best known GRNI methods in the literature. In addition, it has also a low computational complexity. Since C3NET is based on estimates of mutual information values in conjunction with a maximization step, our numerical investigations demonstrate that our inference algorithm exploits causal structural information in the data efficiently. Conclusions For systems biology to succeed in the long run, it is of crucial importance to establish methods that extract large-scale gene networks from high-throughput data that reflect the underlying causal interactions among genes or gene products. Our method can contribute to this endeavor by demonstrating that an inference algorithm with a neat design permits not only a more intuitive and possibly biological interpretation of its working mechanism but can also result in superior results.

  4. Inferring the conservative causal core of gene regulatory networks.

    Science.gov (United States)

    Altay, Gökmen; Emmert-Streib, Frank

    2010-09-28

    Inferring gene regulatory networks from large-scale expression data is an important problem that received much attention in recent years. These networks have the potential to gain insights into causal molecular interactions of biological processes. Hence, from a methodological point of view, reliable estimation methods based on observational data are needed to approach this problem practically. In this paper, we introduce a novel gene regulatory network inference (GRNI) algorithm, called C3NET. We compare C3NET with four well known methods, ARACNE, CLR, MRNET and RN, conducting in-depth numerical ensemble simulations and demonstrate also for biological expression data from E. coli that C3NET performs consistently better than the best known GRNI methods in the literature. In addition, it has also a low computational complexity. Since C3NET is based on estimates of mutual information values in conjunction with a maximization step, our numerical investigations demonstrate that our inference algorithm exploits causal structural information in the data efficiently. For systems biology to succeed in the long run, it is of crucial importance to establish methods that extract large-scale gene networks from high-throughput data that reflect the underlying causal interactions among genes or gene products. Our method can contribute to this endeavor by demonstrating that an inference algorithm with a neat design permits not only a more intuitive and possibly biological interpretation of its working mechanism but can also result in superior results.

  5. Net profit flow per country from 1980 to 2009: The long-term effects of foreign direct investment

    Science.gov (United States)

    2017-01-01

    Aim of the paper The paper aims at describing and explaining net profit flows per country for the period 1980–2009. Net profit flows result from Foreign Direct Investment (FDI) stock and profit repatriation: inward stock creating a profit outflow and outward FDI stock a profit inflow. Profit flows, especially ‘normal’ ones are not commonly researched. Theoretical background According to world-system theory, countries are part of a system characterised by a core, semi-periphery and periphery, as shown by network analyses of trade relations. Network analyses based on ownership relations of TransNational Corporations (TNCs) show that the top 50 firms that control about 40% of the world economy are almost exclusively located in core countries. So, we may expect a hierarchy in net profit flows with core countries on top and the periphery at the bottom. FDI outflows from the core countries especially rose in the 1990s, so we may expect that the difference has grown in time. Data and results A dataset on 'net profit flow' per country is developed. There are diverging developments in net profit flows since the 1980s, as expected: ever more positive for core countries, negative and ever lower for semi-peripheral and peripheral countries, in particular from the 1990s onwards. A fixed effects quantile regression using publicly available data confirms the prediction that peripheral countries share a unique characteristic: their outward investments do not have a positive influence on net profit flow as is the case with semi-peripheral and core countries. The most probable explanation is that peripheral outward investments are indirectly owned by firms located in core and semi-peripheral countries, so all peripheral profit inflows end up in those countries. PMID:28654644

  6. Exemplar-based optical neural net classifier for color pattern recognition

    Science.gov (United States)

    Yu, Francis T. S.; Uang, Chii-Maw; Yang, Xiangyang

    1992-10-01

    We present a color exemplar-based neural network that can be used as an optimum image classifier or an associative memory. Color decomposition and composition technique is used for constructing the polychromatic interconnection weight matrix (IWM). The Hamming net algorithm is modified to relax the dynamic range requirement of the spatial light modulator and to reduce the number of iteration cycles in the winner-take-all layer. Computer simulation results demonstrated the feasibility of this approach

  7. Impact on NOMA on netowrk capacity dimensioning for 5G HetNets

    DEFF Research Database (Denmark)

    Marcano, Andrea; Christiansen, Henrik Lehrmann

    2018-01-01

    , focused on the capacity dimensioning, of a 5G HetNet with hybrid multiple access where NOMA and orthogonal multiple access (OMA) coexist. We use dynamic power allocation and consider four generic pairing methods for NOMA: Hungarian, Gale-Shapley, random and exhaustive. Through our results, we show...... of a flexible choice of the pairing method to be used for NOMA depending on the network load, thus achieving a balance between the network capacity gain and the complexity of the pairing method. In our network, for 100 cells, the combination of the Hungarian and the random method allows supporting 4% higher...... that the optimal or close-to-optimal pairing methods offer the highest capacity gain (22-24%) when the network cells are equally loaded. On the contrary, if the load is unequal and load balancing techniques are used, simpler pairing methods offer higher gains (approximately 29%). This leads to the idea...

  8. Addressing the Influence of Hidden State on Wireless Network Optimizations using Performance Maps

    DEFF Research Database (Denmark)

    Højgaard-Hansen, Kim; Madsen, Tatiana Kozlova; Schwefel, Hans-Peter

    2015-01-01

    be used to optimize the use of the wireless net- work by predicting future network performance and scheduling the net- work communication for certain applications on mobile devices. However, other important factors influence the performance of the wireless communication such as changes in the propagation...... environment and resource sharing. In this work we extend the framework of performance maps for wireless networks by introducing network state as an abstraction for all other factors than location that influence the performance. Since network state might not always be directly observable the framework......Performance of wireless connectivity for network client devices is location dependent. It has been shown that it can be beneficial to collect network performance metrics along with location information to generate maps of the location dependent network performance. These performance maps can...

  9. Evaluation of 5 cleaning and disinfection methods for nets used to collect zebrafish (Danio rerio).

    Science.gov (United States)

    Collymore, Chereen; Porelli, Gina; Lieggi, Christine; Lipman, Neil S

    2014-11-01

    Few standardized methods of cleaning and disinfecting equipment in zebrafish facilities have been published, even though the effectiveness of these procedures is vital to preventing the transmission of pathogenic organisms. Four chemical disinfectants and rinsing with municipal tap water were evaluated for their ability to disinfect nets used to capture zebrafish. The disinfectants included benzalkonium chloride+methylene blue, sodium hypochlorite, chlorine dioxide, and potassium peroxymonosulfate+sodium chloride for a soak time of 5 or 30 min. Disinfection effectiveness was evaluated by using an ATP-based system that measured the reduction in absolute number and percentage of relative light units. In addition, nets were cultured aerobically on blood and MacConkey agar plates to determine the number of bacteria remaining after disinfection procedures. Soaking nets in sodium hypochlorite for 30 min and in potassium peroxymonosulfate+sodium chloride for 5 or 30 min were effective means of disinfection, according to at least 90% reduction in the number of relative light units and no bacterial growth after cleaning. These results will aid facility managers, veterinarians and investigators in selecting net cleaning and disinfection protocols.

  10. Game Coloured Petri Nets

    DEFF Research Database (Denmark)

    Westergaard, Michael

    2006-01-01

    This paper introduces the notion of game coloured Petri nets. This allows the modeler to explicitly model what parts of the model comprise the modeled system and what parts are the environment of the modeled system. We give the formal definition of game coloured Petri nets, a means of reachability...... analysis of this net class, and an application of game coloured Petri nets to automatically generate easy-to-understand visualizations of the model by exploiting the knowledge that some parts of the model are not interesting from a visualization perspective (i.e. they are part of the environment...

  11. No cuerpos, lugares del anonimato: El cuerpo en el net.art Non-bodies, locations of anonymity: the body in the net.art

    Directory of Open Access Journals (Sweden)

    María Teresa AGUILAR

    2011-07-01

    Full Text Available Este texto se ocupa del papel que la representación del cuerpo humano adquiere en el net.art. Por un lado, considera que el cuerpo humano ha sido descorporeizado y proyectado en el no lugar del espacio telemático, enfrentado así a las tendencias de rematerialización del cuerpo, como el arte carnal y el body art, y, por otra, parte considera que incluso en esta esfera ciberespacial el cuerpo de Internet se ve como una prolongación del arte carnal, según los trabajos de Orlan y Tomic. La construcción del género y el trabajo artístico de las mujeres en la red es otro de los objetivos que este texto pone de manifiesto como vinculación de mujeres y nuevas tecnologías en el contexto artístico del net.art.This text deals with the role that the representation of the human body acquired in net.art. On the one hand, considers that the human body has been disembodied and projected in the nowhere of telematic space, thus faced to the rematerialization trends of the body, as the carnal art and body art, and by the other hand considers that even in this cyberspace area the Internet´s body is seen as an extension of carnal art, depending on the work of Orlan and Tomic. The construction of gender and women's artwork in the network is another objective that this text shows as linking between women and new technologies in the artistic context of net.art.

  12. Fast, Distributed Algorithms in Deep Networks

    Science.gov (United States)

    2016-05-11

    shallow networks, additional work will need to be done in order to allow for the application of ADMM to deep nets. The ADMM method allows for quick...Quock V Le, et al. Large scale distributed deep networks. In Advances in Neural Information Processing Systems, pages 1223–1231, 2012. [11] Ken-Ichi...A TRIDENT SCHOLAR PROJECT REPORT NO. 446 Fast, Distributed Algorithms in Deep Networks by Midshipman 1/C Ryan J. Burmeister, USN

  13. Evaluation of a mid-career investigator career development award: Assessing the ability of OppNet K18 awardees to obtain NIH follow-on research funding.

    Science.gov (United States)

    Pomeroy-Carter, Cassidy A; Williams, Sharon R; Han, Xueying; Elwood, William N; Zuckerman, Brian L

    2018-01-01

    The National Institutes of Health (NIH) K18 award mechanism provides funded opportunities for established investigators to gain knowledge in fields outside of their primary disciplines, but outcomes associated with these awards have not been evaluated to date. NIH's Basic Behavioral and Social Sciences Opportunity Network (OppNet) is one of the few initiatives that has used this award mechanism. We explored how the unique features of K18 awards affect the ability of recipients to obtain follow-on NIH research funding. We compared outcomes (ability to obtain follow-on funding and interval between receipt of the primary award and receipt of the first follow-on award) associated with OppNet K18 awards to findings from evaluations of other NIH career development (K) awards, which usually target early-career investigators. We hypothesized that K18 award recipients might be (1) more successful than are other K award recipients in obtaining follow-on NIH research funding due to their career experience or (2) less successful due to the competing demands of other projects. By analyzing follow-on NIH research awards and interview data, we found that OppNet K18 award recipients were at least as successful as were other K award recipients in obtaining follow-on funding and may have been more successful by certain measures. K18 awards produce their outcomes with a lower investment per investigator than do other K awards, suggesting continued or enhanced use of the mechanism.

  14. Evaluation of a mid-career investigator career development award: Assessing the ability of OppNet K18 awardees to obtain NIH follow-on research funding.

    Directory of Open Access Journals (Sweden)

    Cassidy A Pomeroy-Carter

    Full Text Available The National Institutes of Health (NIH K18 award mechanism provides funded opportunities for established investigators to gain knowledge in fields outside of their primary disciplines, but outcomes associated with these awards have not been evaluated to date. NIH's Basic Behavioral and Social Sciences Opportunity Network (OppNet is one of the few initiatives that has used this award mechanism. We explored how the unique features of K18 awards affect the ability of recipients to obtain follow-on NIH research funding. We compared outcomes (ability to obtain follow-on funding and interval between receipt of the primary award and receipt of the first follow-on award associated with OppNet K18 awards to findings from evaluations of other NIH career development (K awards, which usually target early-career investigators. We hypothesized that K18 award recipients might be (1 more successful than are other K award recipients in obtaining follow-on NIH research funding due to their career experience or (2 less successful due to the competing demands of other projects. By analyzing follow-on NIH research awards and interview data, we found that OppNet K18 award recipients were at least as successful as were other K award recipients in obtaining follow-on funding and may have been more successful by certain measures. K18 awards produce their outcomes with a lower investment per investigator than do other K awards, suggesting continued or enhanced use of the mechanism.

  15. Radio frequency interference mitigation using deep convolutional neural networks

    Science.gov (United States)

    Akeret, J.; Chang, C.; Lucchi, A.; Refregier, A.

    2017-01-01

    We propose a novel approach for mitigating radio frequency interference (RFI) signals in radio data using the latest advances in deep learning. We employ a special type of Convolutional Neural Network, the U-Net, that enables the classification of clean signal and RFI signatures in 2D time-ordered data acquired from a radio telescope. We train and assess the performance of this network using the HIDE &SEEK radio data simulation and processing packages, as well as early Science Verification data acquired with the 7m single-dish telescope at the Bleien Observatory. We find that our U-Net implementation is showing competitive accuracy to classical RFI mitigation algorithms such as SEEK's SUMTHRESHOLD implementation. We publish our U-Net software package on GitHub under GPLv3 license.

  16. NET.EXCEL - a European thematic network for suggesting and prioritising future joint R and D projects

    International Nuclear Information System (INIS)

    Svemar, C.; Brewitz, W.

    2004-01-01

    The NET.EXCEL project concerns the forming of a network of European end users for analysing the present status and future needs in research, technical development and demonstration (RTD) for the disposal of highly radioactive waste in the three classical rock media: salt, clay/clay sediments and crystalline rock. The aim is to generate values additional to that gained by the individual participants: Svensk Kaernbraenslehantering AB (Sweden), Posiva Oy (Finland), Empresa Nacional de Residuos Radioactivos SA (Spain), Gesellschaft fuer Anlagen- und Reaktorsicherheit mbH (Germany), Agence nationale pour la gestion des dechets radioactifs (France), Nationale Genossenschaft fuer die Lagerung radioaktiver Abfaelle (Swizerland), Organisme National des Dechets Radioactifs et des Matieres Fissiles Enrichies (Belgium) and United Kingdom Nirex Limited (UK). The practical way to carry out the needed RTD-activities and the principles behind the process to establish priorities for the necessary RTD-work is quite similar among the participants. Common ground has been analysed for the role/responsibilities of the participating organisations, for the establishment of priorities for the RTD work and for the modus operandi of the organisations to carry out the RTD. The issue of prioritising the potential RTD activities and the factors taken into account by the participating organisations have been summarised and analysed with respect to the common denominator in the project. (orig.)

  17. Secure Peer-to-Peer Networks for Scientific Information Sharing

    Science.gov (United States)

    Karimabadi, Homa

    2012-01-01

    The most common means of remote scientific collaboration today includes the trio of e-mail for electronic communication, FTP for file sharing, and personalized Web sites for dissemination of papers and research results. With the growth of broadband Internet, there has been a desire to share large files (movies, files, scientific data files) over the Internet. Email has limits on the size of files that can be attached and transmitted. FTP is often used to share large files, but this requires the user to set up an FTP site for which it is hard to set group privileges, it is not straightforward for everyone, and the content is not searchable. Peer-to-peer technology (P2P), which has been overwhelmingly successful in popular content distribution, is the basis for development of a scientific collaboratory called Scientific Peer Network (SciPerNet). This technology combines social networking with P2P file sharing. SciPerNet will be a standalone application, written in Java and Swing, thus insuring portability to a number of different platforms. Some of the features include user authentication, search capability, seamless integration with a data center, the ability to create groups and social networks, and on-line chat. In contrast to P2P networks such as Gnutella, Bit Torrent, and others, SciPerNet incorporates three design elements that are critical to application of P2P for scientific purposes: User authentication, Data integrity validation, Reliable searching SciPerNet also provides a complementary solution to virtual observatories by enabling distributed collaboration and sharing of downloaded and/or processed data among scientists. This will, in turn, increase scientific returns from NASA missions. As such, SciPerNet can serve a two-fold purpose for NASA: a cost-savings software as well as a productivity tool for scientists working with data from NASA missions.

  18. Network-Based Isoform Quantification with RNA-Seq Data for Cancer Transcriptome Analysis.

    Directory of Open Access Journals (Sweden)

    Wei Zhang

    2015-12-01

    Full Text Available High-throughput mRNA sequencing (RNA-Seq is widely used for transcript quantification of gene isoforms. Since RNA-Seq data alone is often not sufficient to accurately identify the read origins from the isoforms for quantification, we propose to explore protein domain-domain interactions as prior knowledge for integrative analysis with RNA-Seq data. We introduce a Network-based method for RNA-Seq-based Transcript Quantification (Net-RSTQ to integrate protein domain-domain interaction network with short read alignments for transcript abundance estimation. Based on our observation that the abundances of the neighboring isoforms by domain-domain interactions in the network are positively correlated, Net-RSTQ models the expression of the neighboring transcripts as Dirichlet priors on the likelihood of the observed read alignments against the transcripts in one gene. The transcript abundances of all the genes are then jointly estimated with alternating optimization of multiple EM problems. In simulation Net-RSTQ effectively improved isoform transcript quantifications when isoform co-expressions correlate with their interactions. qRT-PCR results on 25 multi-isoform genes in a stem cell line, an ovarian cancer cell line, and a breast cancer cell line also showed that Net-RSTQ estimated more consistent isoform proportions with RNA-Seq data. In the experiments on the RNA-Seq data in The Cancer Genome Atlas (TCGA, the transcript abundances estimated by Net-RSTQ are more informative for patient sample classification of ovarian cancer, breast cancer and lung cancer. All experimental results collectively support that Net-RSTQ is a promising approach for isoform quantification. Net-RSTQ toolbox is available at http://compbio.cs.umn.edu/Net-RSTQ/.

  19. Coloured Petri Nets

    DEFF Research Database (Denmark)

    Jensen, Kurt

    1991-01-01

    This paper describes how Coloured Petri Nets (CP-nets) have been developed — from being a promising theoretical model to being a full-fledged language for the design, specification, simulation, validation and implementation of large software systems (and other systems in which human beings and...

  20. Net zero water

    CSIR Research Space (South Africa)

    Lindeque, M

    2013-01-01

    Full Text Available the national grid. The unfortunate situation with water is that there is no replacement technology for water. Water can be supplied from many different sources. A net zero energy development will move closer to a net zero water development by reducing...